Citrus Sinensis ID: 040896

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
Protein Sequence
AKHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKSLGIP
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHccccEEEEEEccccccccccccccccccHHHHHHHHHHHccccEEEEccccHHHHHHHcccccccEEEccccEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEcccccEEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEcccEEEEEEccccccHHHHHHHHHHHccccccccccEEEEccccccHHHHHHHHHccccEEEEEcccccccccEEEcccHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHccccEEEEEEcccccccccccHccccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHcccccEEEEcccccEEccccccccccccccccccHHcccccEEEEccHHHHHHHHHHHHHHHHHHHccccccEEEccEEEEEEEEEcccHHHHHHHHHHHHHHHHHccccEEcccEEEEEEEccccccHHHHHHHHHHHHcccccccEEEEEEcccccHHHHHHHHHHccccEEEEEccccccccEEEEcccHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
akhpsaldTFDRMVAAAKGKKIVVFLDydgtlspivedpdkafmsdTMRMAVHEVAHffptaivsgrcldKVSRFVQLKNVVYagshgmdistpagslkqnnpkhetrtvdeqgnevvhfqpaqefLPQIQEMIQVLEEKIKTIkgatvednkFCISVHfrrvdeddiNTLQEMVNSIVEAypnfrisggkkvmeirpcidwdkgRALEYLLDtfgfnnasdflplyigddktdeDAFKVIRHmgrgypiivssvpretkalyslrdpdEVMSFLRRLARWKKSLGIP
Flexible Loop (DISEMBL)
akhpsaldtFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDistpagslkqnnpKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTikgatvednkfCISVHFRRVDEDDINTLQEMVNSIVEaypnfrisggkkvmEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGrgypiivssvpretkalyslrdpdevmSFLRRLARWKKSLGIP
Low Complexity Region (SEG)
AKHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKSLGIP
Disordered region (IsUnstruct)
*********FDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKNVVY*********************************VVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARW*******
Disordered Region (DISOPRED)
*KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK*****
Disordered Region (DISEMBL)
AKHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKSLGIP
Disordered Region (DISPRO)
***PSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSL****P*HETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKSL***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
AKHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKSLGIP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	288	2.2.26 [Sep-21-2011]
O64896	385	Trehalose-phosphate phosp	yes	no	0.986	0.737	0.559	6e-93
Q6H5L4	375	Probable trehalose-phosph	yes	no	0.951	0.730	0.580	5e-92
Q7XI41	366	Probable trehalose-phosph	yes	no	0.958	0.754	0.572	3e-91
Q6ZGP8	367	Probable trehalose-phosph	no	no	0.920	0.722	0.567	4e-91
Q9C9S4	374	Trehalose-phosphate phosp	no	no	0.940	0.724	0.560	7e-91
Q75WV3	371	Probable trehalose-phosph	no	no	0.951	0.738	0.558	1e-90
Q67XC9	369	Probable trehalose-phosph	no	no	0.944	0.737	0.558	6e-90
Q6ZAL2	370	Probable trehalose-phosph	no	no	0.944	0.735	0.567	1e-89
Q9SUW0	377	Probable trehalose-phosph	no	no	0.979	0.748	0.556	2e-89
Q8GWG2	349	Probable trehalose-phosph	no	no	0.954	0.787	0.547	7e-89

>sp|O64896|TPPA_ARATH Trehalose-phosphate phosphatase A OS=Arabidopsis thaliana GN=TPPA PE=1 SV=1

 Score =  340 bits (872), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 160/286 (55%), Positives = 210/286 (73%), Gaps = 2/286 (0%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           K+PSAL +F+++++ AKGK+I +FLDYDGTLSPIVE+PD A+MS  MR AV  VA +FPT
Sbjct: 101 KYPSALTSFEKIMSFAKGKRIALFLDYDGTLSPIVEEPDCAYMSSAMRSAVQNVAKYFPT 160

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AI+SGR  DKV  FV L  + YAGSHGMDI +PAG    N+    T +V EQG +V  FQ
Sbjct: 161 AIISGRSRDKVYEFVNLSELYYAGSHGMDIMSPAGE-SLNHEHSRTVSVYEQGKDVNLFQ 219

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA EFLP I +++  L E  K IKG  VEDNKFCISVH+R V+E +   + + V+ ++  
Sbjct: 220 PASEFLPMIDKVLCSLIESTKDIKGVKVEDNKFCISVHYRNVEEKNWTLVAQCVDDVIRT 279

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
           YP  R++ G+KV+EIRP IDWDKG+A+ +LL++ G NN  D LP+Y+GDD+TDEDAFKV+
Sbjct: 280 YPKLRLTHGRKVLEIRPVIDWDKGKAVTFLLESLGLNNCEDVLPIYVGDDRTDEDAFKVL 339

Query: 242 RHM-GRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKSLG 286
           R     GY I+VS+VP+++ A YSLRDP EVM FL+ L  WK+S+G
Sbjct: 340 RDGPNHGYGILVSAVPKDSNAFYSLRDPSEVMEFLKSLVTWKRSMG 385

Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 2

>sp|Q6H5L4|TPP7_ORYSJ Probable trehalose-phosphate phosphatase 7 OS=Oryza sativa subsp. japonica GN=TPP7 PE=2 SV=2

 Score =  337 bits (865), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 165/284 (58%), Positives = 204/284 (71%), Gaps = 10/284 (3%)

Query: 1   AKHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFP 60
           A+HPSAL  F+++VAA+KGK+IV+FLDYDGTLSPIV+DPD AFMS+TMRMAV  VA  FP
Sbjct: 93  ARHPSALGEFEKVVAASKGKQIVMFLDYDGTLSPIVDDPDAAFMSETMRMAVRSVAKHFP 152

Query: 61  TAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGS-LKQNNPKHETRTVDEQGNEVVH 119
           TAIVSGRC DKV  FV+L  + YAGSHGMDI  PA       +P H         N+ V 
Sbjct: 153 TAIVSGRCRDKVFEFVKLAELYYAGSHGMDIKGPASRHAAAKSPPH---------NKGVL 203

Query: 120 FQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIV 179
           FQPA EFLP I+++ Q LE+   +I GA VE+NKFC+SVHFR VDE     L E V  +V
Sbjct: 204 FQPASEFLPMIEQVHQRLEQATSSIPGAKVENNKFCVSVHFRCVDEKSWGALAETVRRVV 263

Query: 180 EAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFK 239
             +P  R+S G+ V E+RP I WDKG+ALE+LLD+ GF + SD LP+YIGDD+TDEDAFK
Sbjct: 264 REFPRLRLSQGRMVFEVRPTIKWDKGKALEFLLDSLGFADCSDVLPVYIGDDRTDEDAFK 323

Query: 240 VIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
           V+R  G+G  I+VS  P+ET A +SL++P EVM FL RL  W +
Sbjct: 324 VLRRRGQGVGILVSKHPKETSASFSLQEPAEVMEFLLRLVEWNR 367

Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|Q7XI41|TPP3_ORYSJ Probable trehalose-phosphate phosphatase 3 OS=Oryza sativa subsp. japonica GN=TPP3 PE=2 SV=1

 Score =  334 bits (857), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 161/281 (57%), Positives = 212/281 (75%), Gaps = 5/281 (1%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           KHPSAL  F+ + AAAKGK+IVVFLDYDGTLSPIV DPD+AFMSD MR AV  VA  FPT
Sbjct: 81  KHPSALAWFESVAAAAKGKEIVVFLDYDGTLSPIVADPDRAFMSDEMREAVRGVAKHFPT 140

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AIVSGRC+DKV  FV+L+ + YAGSHGMDI  P  +  + N  H  +   +QG+ V  FQ
Sbjct: 141 AIVSGRCIDKVFDFVKLEELYYAGSHGMDIRGPTAAASEYN--HNMKA--KQGDAVT-FQ 195

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA +FLP I+E+  VL+E++ +I+G+ VE+NKFC+SVH+R VDE +   L   V +++E 
Sbjct: 196 PAADFLPVIEEVYHVLKERMASIRGSLVENNKFCLSVHYRCVDEAEWGVLDGKVRAVIEG 255

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
           YP+ R+S G+KV+EIRP IDWDKG AL++LL + G+   ++  P+YIGDD+TDEDAFKV+
Sbjct: 256 YPDLRLSKGRKVLEIRPVIDWDKGSALQFLLKSLGYEGRNNVFPIYIGDDRTDEDAFKVL 315

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWK 282
           R+MG+G  I+V+ VP+ET A Y+LR+P EV  FLR+L + K
Sbjct: 316 RNMGQGIGILVTKVPKETAASYTLREPSEVKEFLRKLVKIK 356

Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|Q6ZGP8|TPP4_ORYSJ Probable trehalose-phosphate phosphatase 4 OS=Oryza sativa subsp. japonica GN=TPP4 PE=2 SV=1

 Score =  334 bits (857), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 160/282 (56%), Positives = 200/282 (70%), Gaps = 17/282 (6%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           KHPSAL  F+ + A ++GKKIV+F+DYDGTLSPIV DPD A+MSD MR AV EVA  FPT
Sbjct: 90  KHPSALSKFEEIAAKSRGKKIVMFMDYDGTLSPIVADPDTAYMSDAMRAAVREVAKTFPT 149

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AIVSGRC DKV  FV L ++ YAGSHGMDI  P+     +NP            E    Q
Sbjct: 150 AIVSGRCRDKVRNFVGLSDLYYAGSHGMDIKGPS-----SNP------------ESALCQ 192

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA EFLP I E+ + L EK K+  GA VE+NKFC+SVHFR VDE   N L E V ++++ 
Sbjct: 193 PASEFLPMIDEVYKTLVEKTKSTPGAKVENNKFCLSVHFRCVDEKRWNALGEQVKAVIKE 252

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
           YP  +++ G+KV+EIRP I+WDKG+ALE+LL++ GF N  D +P+YIGDD+TDEDAFKV+
Sbjct: 253 YPKLKLTQGRKVLEIRPSIEWDKGKALEFLLESLGFANCGDVMPVYIGDDRTDEDAFKVL 312

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
           R  G+G  I+VS  P++T A YSL+DP EVM FL RL  WK+
Sbjct: 313 RKRGQGLGILVSKCPKDTNASYSLQDPTEVMEFLLRLVEWKR 354

Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|Q9C9S4|TPPB_ARATH Trehalose-phosphate phosphatase B OS=Arabidopsis thaliana GN=TPPB PE=1 SV=1

 Score =  333 bits (855), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 158/282 (56%), Positives = 205/282 (72%), Gaps = 11/282 (3%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           + PSAL+ FD +V AAKGK+IV+FLDYDGTLSPIVEDPDKAF++  MR  V +VA  FPT
Sbjct: 98  RFPSALNMFDEIVNAAKGKQIVMFLDYDGTLSPIVEDPDKAFITHEMREVVKDVASNFPT 157

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AIV+GR ++KV  FVQ+  + YAGSHGMDI  P                + Q NE V FQ
Sbjct: 158 AIVTGRSIEKVRSFVQVNEIYYAGSHGMDIEGPTN-----------ENSNGQSNERVLFQ 206

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA+EFLP I++++ +LEEK K I GA VE+NKFC+SVHFRRVDE     L E+V S++  
Sbjct: 207 PAREFLPMIEKVVNILEEKTKWIPGAMVENNKFCLSVHFRRVDEKRWPALAEVVKSVLID 266

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
           YP  +++ G+KV+EIRP I WDKG+AL +LL + G+ N+ D +P+YIGDD+TDEDAFKV+
Sbjct: 267 YPKLKLTQGRKVLEIRPTIKWDKGQALNFLLKSLGYENSDDVVPVYIGDDRTDEDAFKVL 326

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
           R  G+G+ I+VS VP++T A YSL+DP +V  FL RL  WK+
Sbjct: 327 RERGQGFGILVSKVPKDTNASYSLQDPSQVNKFLERLVEWKR 368

Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|Q75WV3|TPP1_ORYSJ Probable trehalose-phosphate phosphatase 1 OS=Oryza sativa subsp. japonica GN=TPP1 PE=1 SV=1

 Score =  333 bits (853), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 158/283 (55%), Positives = 206/283 (72%), Gaps = 9/283 (3%)

Query: 1   AKHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFP 60
           AK PSAL +F ++VA+A+GKKI VFLDYDGTLSPIV+DPDKA MS  MR AV  VA +FP
Sbjct: 95  AKCPSALASFKQIVASAQGKKIAVFLDYDGTLSPIVDDPDKAVMSPVMRAAVRNVAKYFP 154

Query: 61  TAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHF 120
           TAIVSGR  +KV  FV+LK + YAGSHGMDI  P+      N +H      E+  +   F
Sbjct: 155 TAIVSGRSRNKVFEFVKLKELYYAGSHGMDIMAPSA-----NHEHSA----EKSKQANLF 205

Query: 121 QPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVE 180
           QPA +FLP I E+ + L + +  I+GATVE+NKFC+SVH+R V E D   +  +VN ++E
Sbjct: 206 QPAHDFLPMIDEVTKSLLQVVSGIEGATVENNKFCVSVHYRNVAEKDWKLVARLVNEVLE 265

Query: 181 AYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKV 240
           A+P  +++ G+ V+E+RP IDWDKG+A+E+LL + G N++ + +P+YIGDD+TDEDAFKV
Sbjct: 266 AFPRLKVTNGRMVLEVRPVIDWDKGKAVEFLLQSLGLNDSENVIPIYIGDDRTDEDAFKV 325

Query: 241 IRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
           +R    GY I+VS VP+ET+A YSLRDP EVM FL  L RWKK
Sbjct: 326 LRQRNCGYGILVSQVPKETEAFYSLRDPSEVMEFLNFLVRWKK 368

Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant improves abiotic stress tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|Q67XC9|TPPD_ARATH Probable trehalose-phosphate phosphatase D OS=Arabidopsis thaliana GN=TPPD PE=2 SV=1

 Score =  330 bits (846), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 158/283 (55%), Positives = 210/283 (74%), Gaps = 11/283 (3%)

Query: 1   AKHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFP 60
           A+HPSAL  F+ +  A+KGK+IV+FLDYDGTLSPIVE+PD+A+MS+ MR AV  VA +FP
Sbjct: 92  AQHPSALTMFEEIAEASKGKQIVMFLDYDGTLSPIVENPDRAYMSEEMREAVKGVARYFP 151

Query: 61  TAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHF 120
           TAIV+GRC DKV RFV+L  + YAGSHGMDI  P+            R    + N+ V F
Sbjct: 152 TAIVTGRCRDKVRRFVKLPGLYYAGSHGMDIKGPS-----------KRNKHNKNNKGVLF 200

Query: 121 QPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVE 180
           Q A EFLP I ++ + L EK++ I+GA VE+NKFC+SVH+R VD+ D   + E V SI+ 
Sbjct: 201 QAANEFLPMIDKVSKCLVEKMRDIEGANVENNKFCVSVHYRCVDQKDWGLVAEHVTSILS 260

Query: 181 AYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKV 240
            YP  R++ G+KV+EIRP I WDKG+ALE+LL++ GF N++D LP+YIGDD+TDEDAFKV
Sbjct: 261 EYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGFANSNDVLPIYIGDDRTDEDAFKV 320

Query: 241 IRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
           +R+ G+G+ I+VS +P+ET A YSL++P EV  FL+RL  WK+
Sbjct: 321 LRNKGQGFGILVSKIPKETSATYSLQEPSEVGEFLQRLVEWKQ 363

Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|Q6ZAL2|TPP6_ORYSJ Probable trehalose-phosphate phosphatase 6 OS=Oryza sativa subsp. japonica GN=TPP6 PE=2 SV=1

 Score =  330 bits (845), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 160/282 (56%), Positives = 206/282 (73%), Gaps = 10/282 (3%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           +HPSAL  F+++VAA+KGKKIV+FLDYDGTLSPIV+DPD AFMSDTMR AV  VA  FPT
Sbjct: 91  RHPSALSKFEQIVAASKGKKIVMFLDYDGTLSPIVDDPDSAFMSDTMRRAVRSVAKHFPT 150

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AIVSGRC DKV  FV+L  + YAGSHGMDI  PA + + N  K +           V FQ
Sbjct: 151 AIVSGRCRDKVFEFVKLAELYYAGSHGMDIKGPAKASRHNKAKAKG----------VLFQ 200

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA EFLP I+++   L E+ K I GA VE+NKFC+SVHFR VDE   +TL ++V + ++ 
Sbjct: 201 PASEFLPMIEQVHDSLIERTKCIPGAKVENNKFCVSVHFRCVDEKSWSTLADIVKAELKD 260

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
           YP  +++ G+ V EIRP I WDKG+ALE+LL++ GF + ++ LP+YIGDD+TDEDAFKV+
Sbjct: 261 YPKLKLTQGRMVFEIRPTIKWDKGKALEFLLESLGFADCTNVLPVYIGDDRTDEDAFKVL 320

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
           R  G+G  I+VS  P++T A YSL++P EVM FL RL  W++
Sbjct: 321 RKRGQGIGILVSKYPKDTNASYSLQEPAEVMEFLLRLVEWER 362

Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|Q9SUW0|TPPG_ARATH Probable trehalose-phosphate phosphatase G OS=Arabidopsis thaliana GN=TPPG PE=2 SV=1

 Score =  328 bits (842), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 157/282 (55%), Positives = 205/282 (72%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           K+PSA+ +F  + A AK KKI VFLDYDGTLSPIV+DPD+A MSD MR AV +VA +FPT
Sbjct: 88  KYPSAITSFAHIAAQAKNKKIAVFLDYDGTLSPIVDDPDRAIMSDAMRAAVKDVAKYFPT 147

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AI+SGR  DKV + V L  + YAGSHGMDI TP          +  +T D+QG EV  FQ
Sbjct: 148 AIISGRSRDKVYQLVGLTELYYAGSHGMDIMTPVNPNGSPEDPNCIKTTDQQGEEVNLFQ 207

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA+EF+P I+E+   L E  K IKGA VE++KFC SVH+R VDE D   + + V+  ++ 
Sbjct: 208 PAKEFIPVIEEVYNNLVEITKCIKGAKVENHKFCTSVHYRNVDEKDWPLVAQRVHDHLKR 267

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
           YP  RI+ G+KV+E+RP I+W+KG+A+E+LL++ G +N  +FLP++IGDDKTDEDAFKV+
Sbjct: 268 YPRLRITHGRKVLEVRPVIEWNKGKAVEFLLESLGLSNNDEFLPIFIGDDKTDEDAFKVL 327

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
           R   RG+ I+VSSVP+E+ A YSLRDP EV  FL+ L +W K
Sbjct: 328 REGNRGFGILVSSVPKESNAFYSLRDPSEVKKFLKTLVKWGK 369

Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|Q8GWG2|TPPH_ARATH Probable trehalose-phosphate phosphatase H OS=Arabidopsis thaliana GN=TPPH PE=2 SV=1

 Score =  327 bits (838), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 155/283 (54%), Positives = 206/283 (72%), Gaps = 8/283 (2%)

Query: 1   AKHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFP 60
            +HPSALD F+ ++  ++GK+IV+FLDYDGTLSPIV+DPD+AFMS  MR  V ++A+ FP
Sbjct: 70  TEHPSALDMFEEILHLSEGKQIVMFLDYDGTLSPIVDDPDRAFMSRKMRRTVRKLANCFP 129

Query: 61  TAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHF 120
           TAIVSGRC++KV  FV+L  + YAGSHGMDI  P     +   K+E    D +    +  
Sbjct: 130 TAIVSGRCIEKVYNFVKLTELYYAGSHGMDIKGP-----EQGSKYEQILQDSKS---LLC 181

Query: 121 QPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVE 180
           QPA EFLP I E+   L EK K+  GA VE+NKFC+SVHFRRVDE++ + L   V S+++
Sbjct: 182 QPATEFLPMIDEVYHKLVEKTKSTPGAQVENNKFCVSVHFRRVDENNWSDLANQVRSVMK 241

Query: 181 AYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKV 240
            YP  R++ G+KV+E+RP I WDKG+ALE+LL++ G+ N +D  PLYIGDD+TDEDAFKV
Sbjct: 242 DYPKLRLTQGRKVLEVRPIIKWDKGKALEFLLESLGYANCTDVFPLYIGDDRTDEDAFKV 301

Query: 241 IRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
           +R   +G  I+VS  P+ET A YSL++PDEVM FL+RL  WK+
Sbjct: 302 LRERRQGLGILVSKFPKETSASYSLQEPDEVMEFLQRLVEWKQ 344

Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	288
255564737	324	trehalose-6-phosphate synthase, putative	0.979	0.870	0.699	1e-116
225462741	413	PREDICTED: trehalose-phosphate phosphata	0.989	0.690	0.656	1e-108
147867192	376	hypothetical protein VITISV_027427 [Viti	0.989	0.757	0.656	1e-108
302143677	353	unnamed protein product [Vitis vinifera]	0.989	0.807	0.656	1e-108
356560280	313	PREDICTED: trehalose-phosphate phosphata	0.986	0.907	0.638	1e-106
255545036	365	trehalose-6-phosphate synthase, putative	0.979	0.772	0.636	1e-104
357463855	366	Trehalose-phosphate phosphatase [Medicag	0.979	0.770	0.638	1e-103
224120642	340	predicted protein [Populus trichocarpa]	0.954	0.808	0.638	1e-102
356509287	367	PREDICTED: trehalose-phosphate phosphata	0.979	0.768	0.614	1e-100
356518619	343	PREDICTED: trehalose-phosphate phosphata	0.979	0.822	0.611	1e-100

>gi|255564737|ref|XP_002523363.1| trehalose-6-phosphate synthase, putative [Ricinus communis] gi|223537451|gb|EEF39079.1| trehalose-6-phosphate synthase, putative [Ricinus communis]

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/283 (69%), Positives = 240/283 (84%), Gaps = 1/283 (0%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           KHPSALD+++ M+   KGK +VVFLDYDGTLSPIV+DPDKAFMS+ MR AV EVA  FPT
Sbjct: 38  KHPSALDSYEGMMKPVKGKSLVVFLDYDGTLSPIVDDPDKAFMSEKMRSAVEEVARVFPT 97

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AI+SGRC DKV RFVQL+NV+YAGSHGMDI T  GS K NN +H  R V+ +G+ V++FQ
Sbjct: 98  AIISGRCRDKVKRFVQLENVIYAGSHGMDIFTTIGSFKCNN-QHRFRAVENEGDGVIYFQ 156

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA+ FLP+IQE+++VL+EK KTIKGA VEDNKFCISVH+R V+ +D++TL+EMV SI+E 
Sbjct: 157 PAKAFLPEIQEILKVLKEKTKTIKGAMVEDNKFCISVHYRLVNVEDVDTLKEMVKSIMED 216

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
           YP+FRI+GGKKVMEIRP IDWDKGRAL+YL+   GF++ +DFLPLYIGDDKTDEDAFK I
Sbjct: 217 YPSFRITGGKKVMEIRPQIDWDKGRALQYLIQNLGFDDCNDFLPLYIGDDKTDEDAFKAI 276

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKS 284
           + +GRGYPI+VSS+P+ETKA YSLRD DEVMSFL  L +WK S
Sbjct: 277 KDIGRGYPIVVSSIPKETKASYSLRDTDEVMSFLLNLVKWKSS 319

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462741|ref|XP_002268007.1| PREDICTED: trehalose-phosphate phosphatase-like [Vitis vinifera]

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 187/285 (65%), Positives = 228/285 (80%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           +HPSA+ +FD+MV+ AKGK IVVFLDYDGTLSPIV+DPD AFMSD MR AV E+A  FPT
Sbjct: 124 EHPSAITSFDQMVSKAKGKSIVVFLDYDGTLSPIVDDPDLAFMSDEMRSAVREIAKNFPT 183

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AI+SGR  +KV  FVQL  V YAGSHGMDI  P   +K  + +++ + +D+QG+EV+ FQ
Sbjct: 184 AIISGRSREKVYEFVQLTEVYYAGSHGMDIMGPPHQVKSCDAQYQIKALDKQGHEVILFQ 243

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA++FLP IQ++  VLEEK + I+GA +EDN+FCISVHFRRV E D +TL+E V S+V+ 
Sbjct: 244 PAKDFLPAIQKISNVLEEKTQKIEGALIEDNRFCISVHFRRVHEKDYDTLEEKVKSVVKN 303

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
           YP FR++ GKKVMEIRP I WDKG ALEYLLDT GF+++SD LPLYIGDD+TDEDAFKVI
Sbjct: 304 YPEFRLTSGKKVMEIRPSIKWDKGCALEYLLDTLGFSDSSDVLPLYIGDDRTDEDAFKVI 363

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKSLG 286
           R  G GYPIIVSS P+ETKA YSLRDP EV+SFL  LA+W+ S  
Sbjct: 364 RRRGEGYPIIVSSTPKETKAAYSLRDPSEVLSFLTHLAKWRNSFS 408

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147867192|emb|CAN79955.1| hypothetical protein VITISV_027427 [Vitis vinifera]

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 187/285 (65%), Positives = 228/285 (80%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           +HPSA+ +FD+MV+ AKGK IVVFLDYDGTLSPIV+DPD AFMSD MR AV E+A  FPT
Sbjct: 87  EHPSAITSFDQMVSKAKGKSIVVFLDYDGTLSPIVDDPDLAFMSDEMRSAVREIAKNFPT 146

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AI+SGR  +KV  FVQL  V YAGSHGMDI  P   +K  + +++ + +D+QG+EV+ FQ
Sbjct: 147 AIISGRSREKVYEFVQLTEVYYAGSHGMDIMGPPHQVKSCDAQYQIKALDKQGHEVILFQ 206

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA++FLP IQ++  VLEEK + I+GA +EDN+FCISVHFRRV E D +TL+E V S+V+ 
Sbjct: 207 PAKDFLPAIQKISNVLEEKTQKIEGALIEDNRFCISVHFRRVHEKDYDTLEEKVKSVVKN 266

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
           YP FR++ GKKVMEIRP I WDKG ALEYLLDT GF+++SD LPLYIGDD+TDEDAFKVI
Sbjct: 267 YPEFRLTSGKKVMEIRPSIKWDKGCALEYLLDTLGFSDSSDVLPLYIGDDRTDEDAFKVI 326

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKSLG 286
           R  G GYPIIVSS P+ETKA YSLRDP EV+SFL  LA+W+ S  
Sbjct: 327 RRRGEGYPIIVSSTPKETKAAYSLRDPSEVLSFLTHLAKWRNSFS 371

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143677|emb|CBI22538.3| unnamed protein product [Vitis vinifera]

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 187/285 (65%), Positives = 228/285 (80%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           +HPSA+ +FD+MV+ AKGK IVVFLDYDGTLSPIV+DPD AFMSD MR AV E+A  FPT
Sbjct: 64  EHPSAITSFDQMVSKAKGKSIVVFLDYDGTLSPIVDDPDLAFMSDEMRSAVREIAKNFPT 123

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AI+SGR  +KV  FVQL  V YAGSHGMDI  P   +K  + +++ + +D+QG+EV+ FQ
Sbjct: 124 AIISGRSREKVYEFVQLTEVYYAGSHGMDIMGPPHQVKSCDAQYQIKALDKQGHEVILFQ 183

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA++FLP IQ++  VLEEK + I+GA +EDN+FCISVHFRRV E D +TL+E V S+V+ 
Sbjct: 184 PAKDFLPAIQKISNVLEEKTQKIEGALIEDNRFCISVHFRRVHEKDYDTLEEKVKSVVKN 243

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
           YP FR++ GKKVMEIRP I WDKG ALEYLLDT GF+++SD LPLYIGDD+TDEDAFKVI
Sbjct: 244 YPEFRLTSGKKVMEIRPSIKWDKGCALEYLLDTLGFSDSSDVLPLYIGDDRTDEDAFKVI 303

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKSLG 286
           R  G GYPIIVSS P+ETKA YSLRDP EV+SFL  LA+W+ S  
Sbjct: 304 RRRGEGYPIIVSSTPKETKAAYSLRDPSEVLSFLTHLAKWRNSFS 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560280|ref|XP_003548421.1| PREDICTED: trehalose-phosphate phosphatase-like [Glycine max]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 182/285 (63%), Positives = 237/285 (83%), Gaps = 1/285 (0%)

Query: 1   AKHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFP 60
            KHPSAL  F+ +++ A+GK+IVVFLDYDGTLSPIV+DPDKA+MSD MR AV EVA+ FP
Sbjct: 23  GKHPSALGNFEEVMSIAEGKQIVVFLDYDGTLSPIVDDPDKAYMSDVMRAAVCEVANCFP 82

Query: 61  TAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHF 120
           TAIVSGR  DKV  FV+L+NV YAGSHGMDISTP+GS K    +H+ + VDE+GN VVH 
Sbjct: 83  TAIVSGRSKDKVYEFVKLENVYYAGSHGMDISTPSGSSKYEEQEHQIKAVDEKGNPVVHC 142

Query: 121 QPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRV-DEDDINTLQEMVNSIV 179
            PA EFLP IQE+++VL+E  + IKG+ +EDN FC++VH+R V +E+++  L++MV +I+
Sbjct: 143 HPAIEFLPTIQEIVKVLKENTRRIKGSMIEDNTFCVTVHYRCVKNEEEVGVLKKMVKTIM 202

Query: 180 EAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFK 239
           +AYP+F ISGG+KVMEIRP ++WDKGRAL YLLDT GF+N S+ LP+Y+GDD+TDEDAFK
Sbjct: 203 KAYPDFYISGGRKVMEIRPTVNWDKGRALTYLLDTLGFDNFSNVLPMYLGDDRTDEDAFK 262

Query: 240 VIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKS 284
           VIRH+G G+PI+VSS+ +ET+A YSLRDP +V++FL RLA+ KK+
Sbjct: 263 VIRHIGCGFPIVVSSIAKETEASYSLRDPADVLTFLIRLAKRKKN 307

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545036|ref|XP_002513579.1| trehalose-6-phosphate synthase, putative [Ricinus communis] gi|223547487|gb|EEF48982.1| trehalose-6-phosphate synthase, putative [Ricinus communis]

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 180/283 (63%), Positives = 231/283 (81%), Gaps = 1/283 (0%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           +HPSAL  FD+M+ AAKGKKIVVFLDYDGTLSPIV++PD AFMSD MR AV EVA +FPT
Sbjct: 69  EHPSALSLFDQMMKAAKGKKIVVFLDYDGTLSPIVDNPDLAFMSDEMRAAVREVAKYFPT 128

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AI+SGR  DKV  FV+L NV YAGSHGMDI  P   +K  + K+ T T++++GNEV+ FQ
Sbjct: 129 AIISGRSRDKVKEFVKLSNVYYAGSHGMDIMAPPRPVKSCDGKYNTITLNKKGNEVL-FQ 187

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA++FLP +Q+++  L+EK+K I+GA VEDN+FC+SVHFR+V E+D   L+E V S++E 
Sbjct: 188 PAKKFLPAMQKILTALKEKVKKIQGARVEDNRFCVSVHFRQVREEDYGKLEEKVKSVLEH 247

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
           YP F ++ GKKVMEIRP I+WDKG ALEYLLDT G +N++D LP+YIGDD+TDEDAF+VI
Sbjct: 248 YPEFHLNWGKKVMEIRPSIEWDKGHALEYLLDTLGLSNSNDVLPVYIGDDRTDEDAFQVI 307

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKS 284
           +  G+G+PIIV+S P++TKA YSL +P EV++FL RLARW+KS
Sbjct: 308 QRRGQGFPIIVTSSPKDTKASYSLSNPSEVLTFLLRLARWRKS 350

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463855|ref|XP_003602209.1| Trehalose-phosphate phosphatase [Medicago truncatula] gi|355491257|gb|AES72460.1| Trehalose-phosphate phosphatase [Medicago truncatula]

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/285 (63%), Positives = 227/285 (79%), Gaps = 3/285 (1%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           KHPSAL +FDR++ AA GK+IVVFLDYDGTLSPIV DPD+AFMSD MR AV EVA +FPT
Sbjct: 72  KHPSALSSFDRLMKAAIGKRIVVFLDYDGTLSPIVNDPDRAFMSDEMRAAVSEVATYFPT 131

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHE--TRTVDEQGNEVVH 119
           AI+SGR  +KV  FV+L N+ YAGSHGMDI  P+G ++ ++  H+    T+D  GNEV  
Sbjct: 132 AIISGRSREKVKDFVKLNNLYYAGSHGMDIMAPSGPIRSSDGNHQCYNNTLDTNGNEV-P 190

Query: 120 FQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIV 179
           FQPA++FLP IQE+++ LE  IK I+GA +E+N+FCISVHFR+V E D N L+E V S++
Sbjct: 191 FQPAKKFLPAIQEILRKLENVIKDIEGAKIENNRFCISVHFRQVHEKDYNKLEEKVKSVL 250

Query: 180 EAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFK 239
              P F ++ GKKVMEIRP I+W+KG A+EY LDT G +++S+FLP+YIGDDKTDEDAFK
Sbjct: 251 GKNPLFCLTEGKKVMEIRPSIEWNKGNAVEYFLDTLGLSSSSNFLPVYIGDDKTDEDAFK 310

Query: 240 VIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKS 284
           VI+ MG+GYPIIVSS PRET ALYSLRDP EV+ FL RLA+W K+
Sbjct: 311 VIKRMGQGYPIIVSSTPRETDALYSLRDPSEVLIFLSRLAKWTKT 355

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120642|ref|XP_002318381.1| predicted protein [Populus trichocarpa] gi|222859054|gb|EEE96601.1| predicted protein [Populus trichocarpa]

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/282 (63%), Positives = 223/282 (79%), Gaps = 7/282 (2%)

Query: 3   HPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTA 62
           HPSAL +FD+M+  AKGKKIVVFLDYDGTLSPIV DPD+AFMSD MR AV EVA +FPTA
Sbjct: 51  HPSALTSFDQMMKDAKGKKIVVFLDYDGTLSPIVNDPDRAFMSDEMRAAVREVAKYFPTA 110

Query: 63  IVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQP 122
           I+SGR  DKV  FVQL N+ YAGSHGMDI  P   ++ ++ K+ T      GNE V FQP
Sbjct: 111 IISGRSRDKVKGFVQLNNIYYAGSHGMDIMAPPRPVRSSDGKYHT------GNEAV-FQP 163

Query: 123 AQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAY 182
           AQ+FLP IQ++++ LEE I  I+GA VE+N+FC+SVHFR+V ++D   L+E V SI++ Y
Sbjct: 164 AQKFLPSIQKILKELEEAIMKIQGARVENNRFCVSVHFRQVRDEDYGILEEKVKSILKHY 223

Query: 183 PNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIR 242
           P+FR+  GKKVMEIRP I+WDKG ALEYLLDT G  N +D LP+YIGDD+TDEDAFKVI+
Sbjct: 224 PDFRLGWGKKVMEIRPSIEWDKGNALEYLLDTLGLGNCTDVLPVYIGDDRTDEDAFKVIQ 283

Query: 243 HMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKS 284
             G+GYPI+V+S P++TKA YSL DP EV++FL RLARW+K+
Sbjct: 284 KRGQGYPIVVASSPKDTKASYSLHDPSEVLTFLLRLARWRKA 325

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509287|ref|XP_003523382.1| PREDICTED: trehalose-phosphate phosphatase-like [Glycine max]

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/283 (61%), Positives = 222/283 (78%), Gaps = 1/283 (0%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           +HPSAL++FDR++ AA GK+I+VFLDYDGTLSPIV DPD+AFMSD MR AV+EVA +FPT
Sbjct: 84  RHPSALNSFDRLMKAASGKRIIVFLDYDGTLSPIVNDPDRAFMSDEMRAAVYEVATYFPT 143

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AI+SGR  DKV  FV+L N+ YAGSHGMDI  P+ ++  ++ KH     +  G EV  FQ
Sbjct: 144 AIISGRSRDKVKGFVKLNNLYYAGSHGMDIMAPSMAVTSSDGKHFDIARNTNGTEV-PFQ 202

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA++FLP I E+I+VL+ ++K IKGA VEDN FC+SVHFR+V E D + L+  V S++E 
Sbjct: 203 PAKKFLPAIGEIIRVLKNEVKEIKGAMVEDNGFCLSVHFRQVQEKDYDVLEAKVKSVLEN 262

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
            P F ++ GKKVMEIRP I W+KG A+EY LDT G ++ +D LP+YIGDD+TDEDAFKVI
Sbjct: 263 NPEFCLTEGKKVMEIRPSIKWNKGNAVEYFLDTLGLSSCNDILPVYIGDDRTDEDAFKVI 322

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKS 284
           +   +GYPIIVSS+PRET ALYSLRDP EV+ FL RLA+W+K+
Sbjct: 323 QSREQGYPIIVSSIPRETNALYSLRDPSEVLIFLSRLAKWRKT 365

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518619|ref|XP_003527976.1| PREDICTED: trehalose-phosphate phosphatase-like [Glycine max]

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/283 (61%), Positives = 222/283 (78%), Gaps = 1/283 (0%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           +HPSAL+TFDR++  A GK+I+VFLDYDGTLSPIV DPD+AFMSD MR AV+E+A +FPT
Sbjct: 60  RHPSALNTFDRLMKGANGKRIIVFLDYDGTLSPIVNDPDRAFMSDEMRAAVYEIATYFPT 119

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AI+SGR  DKV  FV+L N+ YAGSHGMDI  P+  +  ++ KH     +  G EV  FQ
Sbjct: 120 AIISGRSRDKVKDFVKLNNLYYAGSHGMDIMAPSMPVTSSDGKHFGIARNTNGIEV-PFQ 178

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA++FLP I+E+I+VL+ ++K IKGA +EDN FC+SVHFR+V E D + L+E V S++E 
Sbjct: 179 PAKKFLPAIREIIRVLKNEVKEIKGAMIEDNGFCLSVHFRQVQEKDYDVLEEKVKSVLEN 238

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
            P F ++ GKKVMEIRP I W+KG A+EY LDT G ++ SD LP+YIGDD+TDEDAFKVI
Sbjct: 239 NPQFCLTEGKKVMEIRPSIKWNKGNAVEYFLDTLGLSSCSDILPVYIGDDRTDEDAFKVI 298

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKS 284
           +   +GYPIIVSS+PRET ALYSLRDP EV+ FL RLA+W+++
Sbjct: 299 QSREQGYPIIVSSIPRETNALYSLRDPSEVLIFLSRLAKWRRT 341

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	288
TAIR|locus:2153082	385	ATTPPA [Arabidopsis thaliana (	0.986	0.737	0.559	8e-85
TAIR|locus:2007651	369	TPPD "trehalose-6-phosphate ph	0.944	0.737	0.568	5e-83
TAIR|locus:2194704	374	TPPB "trehalose-6-phosphate ph	0.951	0.732	0.562	7.4e-82
TAIR|locus:2127510	377	TPPG "trehalose-6-phosphate ph	0.979	0.748	0.556	7.4e-82
UNIPROTKB|Q75WV3	371	TPP1 "Probable trehalose-phosp	0.951	0.738	0.558	9.4e-82
TAIR|locus:2135540	368	TPPF "trehalose-6-phosphate ph	0.958	0.75	0.556	3.2e-81
TAIR|locus:2135272	349	TPPH "trehalose-6-phosphate ph	0.951	0.785	0.549	2.2e-80
UNIPROTKB|Q9FWQ2	382	TPP2 "Probable trehalose-phosp	0.975	0.735	0.535	5.4e-79
TAIR|locus:2171850	370	TPPJ "trehalose-6-phosphate ph	0.944	0.735	0.542	8.7e-79
TAIR|locus:2184063	369	TPPI "trehalose-6-phosphate ph	0.944	0.737	0.528	1.6e-77

TAIR|locus:2153082 ATTPPA [Arabidopsis thaliana (taxid:3702)]

 Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
 Identities = 160/286 (55%), Positives = 210/286 (73%)

Query:     2 KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
             K+PSAL +F+++++ AKGK+I +FLDYDGTLSPIVE+PD A+MS  MR AV  VA +FPT
Sbjct:   101 KYPSALTSFEKIMSFAKGKRIALFLDYDGTLSPIVEEPDCAYMSSAMRSAVQNVAKYFPT 160

Query:    62 AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
             AI+SGR  DKV  FV L  + YAGSHGMDI +PAG    N+    T +V EQG +V  FQ
Sbjct:   161 AIISGRSRDKVYEFVNLSELYYAGSHGMDIMSPAGE-SLNHEHSRTVSVYEQGKDVNLFQ 219

Query:   122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
             PA EFLP I +++  L E  K IKG  VEDNKFCISVH+R V+E +   + + V+ ++  
Sbjct:   220 PASEFLPMIDKVLCSLIESTKDIKGVKVEDNKFCISVHYRNVEEKNWTLVAQCVDDVIRT 279

Query:   182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
             YP  R++ G+KV+EIRP IDWDKG+A+ +LL++ G NN  D LP+Y+GDD+TDEDAFKV+
Sbjct:   280 YPKLRLTHGRKVLEIRPVIDWDKGKAVTFLLESLGLNNCEDVLPIYVGDDRTDEDAFKVL 339

Query:   242 RH-MGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKSLG 286
             R     GY I+VS+VP+++ A YSLRDP EVM FL+ L  WK+S+G
Sbjct:   340 RDGPNHGYGILVSAVPKDSNAFYSLRDPSEVMEFLKSLVTWKRSMG 385

GO:0003824 "catalytic activity" evidence=IEA

GO:0004805 "trehalose-phosphatase activity" evidence=ISS;IDA

GO:0005634 "nucleus" evidence=ISM

GO:0005992 "trehalose biosynthetic process" evidence=IEA;ISS;IDA

GO:0008152 "metabolic process" evidence=IEA

TAIR|locus:2007651 TPPD "trehalose-6-phosphate phosphatase D" [Arabidopsis thaliana (taxid:3702)]

 Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
 Identities = 161/283 (56%), Positives = 214/283 (75%)

Query:     1 AKHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFP 60
             A+HPSAL  F+ +  A+KGK+IV+FLDYDGTLSPIVE+PD+A+MS+ MR AV  VA +FP
Sbjct:    92 AQHPSALTMFEEIAEASKGKQIVMFLDYDGTLSPIVENPDRAYMSEEMREAVKGVARYFP 151

Query:    61 TAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHF 120
             TAIV+GRC DKV RFV+L  + YAGSHGMDI  P+   K+N  KH       + N+ V F
Sbjct:   152 TAIVTGRCRDKVRRFVKLPGLYYAGSHGMDIKGPS---KRN--KHN------KNNKGVLF 200

Query:   121 QPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVE 180
             Q A EFLP I ++ + L EK++ I+GA VE+NKFC+SVH+R VD+ D   + E V SI+ 
Sbjct:   201 QAANEFLPMIDKVSKCLVEKMRDIEGANVENNKFCVSVHYRCVDQKDWGLVAEHVTSILS 260

Query:   181 AYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKV 240
              YP  R++ G+KV+EIRP I WDKG+ALE+LL++ GF N++D LP+YIGDD+TDEDAFKV
Sbjct:   261 EYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGFANSNDVLPIYIGDDRTDEDAFKV 320

Query:   241 IRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
             +R+ G+G+ I+VS +P+ET A YSL++P EV  FL+RL  WK+
Sbjct:   321 LRNKGQGFGILVSKIPKETSATYSLQEPSEVGEFLQRLVEWKQ 363

GO:0003824 "catalytic activity" evidence=IEA

GO:0004805 "trehalose-phosphatase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005992 "trehalose biosynthetic process" evidence=IEA;ISS

GO:0008152 "metabolic process" evidence=IEA

TAIR|locus:2194704 TPPB "trehalose-6-phosphate phosphatase B" [Arabidopsis thaliana (taxid:3702)]

 Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
 Identities = 161/286 (56%), Positives = 211/286 (73%)

Query:     2 KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
             + PSAL+ FD +V AAKGK+IV+FLDYDGTLSPIVEDPDKAF++  MR  V +VA  FPT
Sbjct:    98 RFPSALNMFDEIVNAAKGKQIVMFLDYDGTLSPIVEDPDKAFITHEMREVVKDVASNFPT 157

Query:    62 AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
             AIV+GR ++KV  FVQ+  + YAGSHGMDI  P     +N+        + Q NE V FQ
Sbjct:   158 AIVTGRSIEKVRSFVQVNEIYYAGSHGMDIEGPTN---ENS--------NGQSNERVLFQ 206

Query:   122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
             PA+EFLP I++++ +LEEK K I GA VE+NKFC+SVHFRRVDE     L E+V S++  
Sbjct:   207 PAREFLPMIEKVVNILEEKTKWIPGAMVENNKFCLSVHFRRVDEKRWPALAEVVKSVLID 266

Query:   182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
             YP  +++ G+KV+EIRP I WDKG+AL +LL + G+ N+ D +P+YIGDD+TDEDAFKV+
Sbjct:   267 YPKLKLTQGRKVLEIRPTIKWDKGQALNFLLKSLGYENSDDVVPVYIGDDRTDEDAFKVL 326

Query:   242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWK-KSLG 286
             R  G+G+ I+VS VP++T A YSL+DP +V  FL RL  WK K++G
Sbjct:   327 RERGQGFGILVSKVPKDTNASYSLQDPSQVNKFLERLVEWKRKTVG 372

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005992 "trehalose biosynthetic process" evidence=IEA;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0004805 "trehalose-phosphatase activity" evidence=IDA

TAIR|locus:2127510 TPPG "trehalose-6-phosphate phosphatase G" [Arabidopsis thaliana (taxid:3702)]

 Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
 Identities = 157/282 (55%), Positives = 205/282 (72%)

Query:     2 KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
             K+PSA+ +F  + A AK KKI VFLDYDGTLSPIV+DPD+A MSD MR AV +VA +FPT
Sbjct:    88 KYPSAITSFAHIAAQAKNKKIAVFLDYDGTLSPIVDDPDRAIMSDAMRAAVKDVAKYFPT 147

Query:    62 AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
             AI+SGR  DKV + V L  + YAGSHGMDI TP          +  +T D+QG EV  FQ
Sbjct:   148 AIISGRSRDKVYQLVGLTELYYAGSHGMDIMTPVNPNGSPEDPNCIKTTDQQGEEVNLFQ 207

Query:   122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
             PA+EF+P I+E+   L E  K IKGA VE++KFC SVH+R VDE D   + + V+  ++ 
Sbjct:   208 PAKEFIPVIEEVYNNLVEITKCIKGAKVENHKFCTSVHYRNVDEKDWPLVAQRVHDHLKR 267

Query:   182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
             YP  RI+ G+KV+E+RP I+W+KG+A+E+LL++ G +N  +FLP++IGDDKTDEDAFKV+
Sbjct:   268 YPRLRITHGRKVLEVRPVIEWNKGKAVEFLLESLGLSNNDEFLPIFIGDDKTDEDAFKVL 327

Query:   242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
             R   RG+ I+VSSVP+E+ A YSLRDP EV  FL+ L +W K
Sbjct:   328 REGNRGFGILVSSVPKESNAFYSLRDPSEVKKFLKTLVKWGK 369

GO:0003824 "catalytic activity" evidence=IEA

GO:0004805 "trehalose-phosphatase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005992 "trehalose biosynthetic process" evidence=IEA;ISS

GO:0008152 "metabolic process" evidence=IEA

UNIPROTKB|Q75WV3 TPP1 "Probable trehalose-phosphate phosphatase 1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
 Identities = 158/283 (55%), Positives = 206/283 (72%)

Query:     1 AKHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFP 60
             AK PSAL +F ++VA+A+GKKI VFLDYDGTLSPIV+DPDKA MS  MR AV  VA +FP
Sbjct:    95 AKCPSALASFKQIVASAQGKKIAVFLDYDGTLSPIVDDPDKAVMSPVMRAAVRNVAKYFP 154

Query:    61 TAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHF 120
             TAIVSGR  +KV  FV+LK + YAGSHGMDI  P+      N +H      E+  +   F
Sbjct:   155 TAIVSGRSRNKVFEFVKLKELYYAGSHGMDIMAPSA-----NHEHSA----EKSKQANLF 205

Query:   121 QPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVE 180
             QPA +FLP I E+ + L + +  I+GATVE+NKFC+SVH+R V E D   +  +VN ++E
Sbjct:   206 QPAHDFLPMIDEVTKSLLQVVSGIEGATVENNKFCVSVHYRNVAEKDWKLVARLVNEVLE 265

Query:   181 AYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKV 240
             A+P  +++ G+ V+E+RP IDWDKG+A+E+LL + G N++ + +P+YIGDD+TDEDAFKV
Sbjct:   266 AFPRLKVTNGRMVLEVRPVIDWDKGKAVEFLLQSLGLNDSENVIPIYIGDDRTDEDAFKV 325

Query:   241 IRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
             +R    GY I+VS VP+ET+A YSLRDP EVM FL  L RWKK
Sbjct:   326 LRQRNCGYGILVSQVPKETEAFYSLRDPSEVMEFLNFLVRWKK 368

GO:0004805 "trehalose-phosphatase activity" evidence=IDA

GO:0005992 "trehalose biosynthetic process" evidence=IDA

GO:0009409 "response to cold" evidence=IGI

GO:0009651 "response to salt stress" evidence=IGI

TAIR|locus:2135540 TPPF "trehalose-6-phosphate phosphatase F" [Arabidopsis thaliana (taxid:3702)]

 Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
 Identities = 157/282 (55%), Positives = 206/282 (73%)

Query:     2 KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
             K+PSA+ +F  + A AK KKI VFLDYDGTLSPIV+DPD+A MSD MR AV +VA +FPT
Sbjct:    85 KYPSAISSFAHIAAQAKKKKIAVFLDYDGTLSPIVDDPDRAIMSDAMRSAVKDVASYFPT 144

Query:    62 AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
             AI+SGR  DKV + V L  + YAGSHGMDI T +     + P    ++ D+QG EV  FQ
Sbjct:   145 AIISGRSRDKVYQLVGLTELYYAGSHGMDIMTSS-----DGPNC-FKSTDQQGKEVNLFQ 198

Query:   122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
             PA+EF+P I E+ + L EK+K IKGA VE++KFC SVH+R VDE D   + + V+  ++ 
Sbjct:   199 PAREFIPVIDEVFRTLVEKMKDIKGAKVENHKFCASVHYRNVDEKDWPIIAQRVHDHLKQ 258

Query:   182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
             YP  R++ G+KV+E+RP IDW+KGRA+E+LL++ G +N  D LP+YIGDD TDEDAFKV+
Sbjct:   259 YPRLRLTHGRKVLEVRPVIDWNKGRAVEFLLESLGLSNKDDLLPIYIGDDTTDEDAFKVL 318

Query:   242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
             R   RG+ I+VSS+P+E+ A YSLRDP EV  FL+ L +W K
Sbjct:   319 RDGNRGFGILVSSIPKESNAFYSLRDPSEVKKFLKTLVKWAK 360

GO:0003824 "catalytic activity" evidence=IEA

GO:0004805 "trehalose-phosphatase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005992 "trehalose biosynthetic process" evidence=IEA;ISS

GO:0008152 "metabolic process" evidence=IEA

TAIR|locus:2135272 TPPH "trehalose-6-phosphate phosphatase H" [Arabidopsis thaliana (taxid:3702)]

 Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
 Identities = 155/282 (54%), Positives = 206/282 (73%)

Query:     2 KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
             +HPSALD F+ ++  ++GK+IV+FLDYDGTLSPIV+DPD+AFMS  MR  V ++A+ FPT
Sbjct:    71 EHPSALDMFEEILHLSEGKQIVMFLDYDGTLSPIVDDPDRAFMSRKMRRTVRKLANCFPT 130

Query:    62 AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
             AIVSGRC++KV  FV+L  + YAGSHGMDI  P     +   K+E    D +    +  Q
Sbjct:   131 AIVSGRCIEKVYNFVKLTELYYAGSHGMDIKGP-----EQGSKYEQILQDSKS---LLCQ 182

Query:   122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
             PA EFLP I E+   L EK K+  GA VE+NKFC+SVHFRRVDE++ + L   V S+++ 
Sbjct:   183 PATEFLPMIDEVYHKLVEKTKSTPGAQVENNKFCVSVHFRRVDENNWSDLANQVRSVMKD 242

Query:   182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
             YP  R++ G+KV+E+RP I WDKG+ALE+LL++ G+ N +D  PLYIGDD+TDEDAFKV+
Sbjct:   243 YPKLRLTQGRKVLEVRPIIKWDKGKALEFLLESLGYANCTDVFPLYIGDDRTDEDAFKVL 302

Query:   242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
             R   +G  I+VS  P+ET A YSL++PDEVM FL+RL  WK+
Sbjct:   303 RERRQGLGILVSKFPKETSASYSLQEPDEVMEFLQRLVEWKQ 344

GO:0003824 "catalytic activity" evidence=IEA

GO:0004805 "trehalose-phosphatase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005992 "trehalose biosynthetic process" evidence=IEA;ISS

GO:0008152 "metabolic process" evidence=IEA

UNIPROTKB|Q9FWQ2 TPP2 "Probable trehalose-phosphate phosphatase 2" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
 Identities = 151/282 (53%), Positives = 201/282 (71%)

Query:     3 HPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTA 62
             HPSAL +F+ +V  A+GK++ +FLDYDGTLSPIV++P+ A MSD MR AV  VA  FPTA
Sbjct:    98 HPSALTSFEDIVNLARGKRLALFLDYDGTLSPIVDNPENAVMSDEMRSAVKHVASLFPTA 157

Query:    63 IVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHET-RTVDEQGNEVVHFQ 121
             I+SGR  DKV  FV+L  + YAGSHGMDI  P      +    E  R+ D +G EV  FQ
Sbjct:   158 IISGRSRDKVFDFVKLTELYYAGSHGMDIMGPVRKSDSSGQHVECIRSTDSEGKEVNLFQ 217

Query:   122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
             PA EFLP I E+ + L E IK I GA +EDNKFC+SVH+R V   D   + + V ++++ 
Sbjct:   218 PASEFLPMISEVYKKLSESIKDIDGARMEDNKFCVSVHYRNVAPHDYGEVHQRVTAVLKN 277

Query:   182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
             YP  R++ G+KV+E+RP IDW+KG+A+E+LL++ G     D LP+Y+GDDKTDEDAFKV+
Sbjct:   278 YPCLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLCGKEDVLPIYVGDDKTDEDAFKVL 337

Query:   242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
             +    G+ I+VSSVP++T A YS+RDP EVM FL++LA WK+
Sbjct:   338 KANSIGFGILVSSVPKDTDAFYSVRDPAEVMEFLKKLASWKE 379

GO:0004805 "trehalose-phosphatase activity" evidence=IDA

GO:0005992 "trehalose biosynthetic process" evidence=IDA

TAIR|locus:2171850 TPPJ "trehalose-6-phosphate phosphatase J" [Arabidopsis thaliana (taxid:3702)]

 Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
 Identities = 153/282 (54%), Positives = 203/282 (71%)

Query:     2 KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
             +HPSAL+ F+R++  A+GK+IV+FLDYDGTLSPIV+DPD+AFM+  MR  V ++A  FPT
Sbjct:    96 RHPSALNMFERIIEEARGKQIVMFLDYDGTLSPIVDDPDRAFMTSKMRRTVKKMAKCFPT 155

Query:    62 AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
             +IV+GRC+DKV  FV+L  + YAGSHGMDI  P     + N        D+     V +Q
Sbjct:   156 SIVTGRCIDKVYSFVKLAELYYAGSHGMDIKGPTKGFSRYNK-------DKPS---VLYQ 205

Query:   122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
             PA +FLP I E+ + L EK K+  GA VE+NKFC+SVHFR VDE   + L   V S+V+ 
Sbjct:   206 PAGDFLPMIDEVYKQLVEKTKSTPGAKVENNKFCLSVHFRCVDEKKWSELASKVRSVVKN 265

Query:   182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
             YP  ++S G+KV EIRP I W+KG+ALE+LL++ GF N +D  P+YIGDDKTDEDAFK++
Sbjct:   266 YPTLKLSQGRKVFEIRPIIKWNKGKALEFLLESLGFENCNDVFPIYIGDDKTDEDAFKLL 325

Query:   242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
             R  G+G+ I+VS  P++T A YSL+DP EVM+FL RL  WK+
Sbjct:   326 RGRGQGFGILVSKFPKDTSASYSLQDPPEVMNFLGRLVEWKQ 367

GO:0003824 "catalytic activity" evidence=IEA

GO:0004805 "trehalose-phosphatase activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0005992 "trehalose biosynthetic process" evidence=IEA;ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2184063 TPPI "trehalose-6-phosphate phosphatase I" [Arabidopsis thaliana (taxid:3702)]

 Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
 Identities = 149/282 (52%), Positives = 205/282 (72%)

Query:     2 KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
             +HPSAL+ F++++ A++GK+IV+FLDYDGTLSPIV+DPDKAFMS  MR  V ++A  FPT
Sbjct:    93 QHPSALEKFEQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKCFPT 152

Query:    62 AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
             AIV+GRC+DKV  FV+L  + YAGSHGMDI  PA        +H+      +  + + +Q
Sbjct:   153 AIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFS----RHK------RVKQSLLYQ 202

Query:   122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
             PA ++LP I E+ + L EK K+  GA VE++KFC SVHFR VDE   + L   V S+++ 
Sbjct:   203 PANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKK 262

Query:   182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
             +P  +++ G+KV EIRP I+WDKG+ALE+LL++ GF N ++  P+YIGDD+TDEDAFK++
Sbjct:   263 FPTLQLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKML 322

Query:   242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
             R  G G+ I+VS  P++T A YSL+DP EVM FLRRL  WK+
Sbjct:   323 RDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLRRLVEWKQ 364

GO:0003824 "catalytic activity" evidence=IEA

GO:0004805 "trehalose-phosphatase activity" evidence=ISS

GO:0005992 "trehalose biosynthetic process" evidence=IEA;ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O64896	TPPA_ARATH	3, ., 1, ., 3, ., 1, 2	0.5594	0.9861	0.7376	yes	no
Q7XI41	TPP3_ORYSJ	3, ., 1, ., 3, ., 1, 2	0.5729	0.9583	0.7540	yes	no
Q6H5L4	TPP7_ORYSJ	3, ., 1, ., 3, ., 1, 2	0.5809	0.9513	0.7306	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	288
PLN02580	384	PLN02580, PLN02580, trehalose-phosphatase	1e-141
PLN02151	354	PLN02151, PLN02151, trehalose-phosphatase	1e-116
PLN03017	366	PLN03017, PLN03017, trehalose-phosphatase	1e-113
pfam02358	235	pfam02358, Trehalose_PPase, Trehalose-phosphatase	8e-61
TIGR00685	244	TIGR00685, T6PP, trehalose-phosphatase	2e-42
COG1877	266	COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra	1e-37
PRK14501	726	PRK14501, PRK14501, putative bifunctional trehalos	5e-34
PRK10187	266	PRK10187, PRK10187, trehalose-6-phosphate phosphat	5e-17
TIGR01484	204	TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase,	7e-13
PLN02205	854	PLN02205, PLN02205, alpha,alpha-trehalose-phosphat	7e-07

>gnl|CDD|215317 PLN02580, PLN02580, trehalose-phosphatase

 Score =  403 bits (1037), Expect = e-141
 Identities = 160/283 (56%), Positives = 208/283 (73%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           K+PSAL +F+++   AKGKKI +FLDYDGTLSPIV+DPD+A MSD MR AV  VA +FPT
Sbjct: 100 KYPSALTSFEQIANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYFPT 159

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AI+SGR  DKV   V L  + YAGSHGMDI  P      N+  +  ++ D+QG EV  FQ
Sbjct: 160 AIISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQ 219

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA EFLP I E+ + L E  K IKGA VE++KFC+SVH+R VDE +   + + V+ +++ 
Sbjct: 220 PASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKK 279

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
           YP  R++ G+KV+E+RP IDW+KG+A+E+LL++ G +N  D LP+YIGDD+TDEDAFKV+
Sbjct: 280 YPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVL 339

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKS 284
           R   RGY I+VSSVP+E+ A YSLRDP EVM FL+ L  WKKS
Sbjct: 340 REGNRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKKS 382

Length = 384

>gnl|CDD|177812 PLN02151, PLN02151, trehalose-phosphatase

 Score =  337 bits (866), Expect = e-116
 Identities = 150/282 (53%), Positives = 202/282 (71%), Gaps = 11/282 (3%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           +HPSAL+ F+ ++  ++GK+IV+FLDYDGTLSPIV+DPD+AFMS  MR  V ++A  FPT
Sbjct: 79  EHPSALNMFEEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKCFPT 138

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AIVSGRC +KVS FV+L  + YAGSHGMDI  P     +   K++      + N+ +  Q
Sbjct: 139 AIVSGRCREKVSSFVKLTELYYAGSHGMDIKGP-----EQGSKYK------KENQSLLCQ 187

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA EFLP I E+ + L EK K+I GA VE+NKFC SVHFR V+E+  + L   V S+++ 
Sbjct: 188 PATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKWSDLANQVRSVLKN 247

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
           YP   ++ G+KV+EIRP I WDKG+ALE+LL++ G+ N +D  P+YIGDD+TDEDAFK++
Sbjct: 248 YPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKIL 307

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
           R   +G  I+VS   +ET A YSL++PDEVM FL RL  WK+
Sbjct: 308 RDKKQGLGILVSKYAKETNASYSLQEPDEVMEFLERLVEWKQ 349

Length = 354

>gnl|CDD|178591 PLN03017, PLN03017, trehalose-phosphatase

 Score =  331 bits (850), Expect = e-113
 Identities = 147/282 (52%), Positives = 203/282 (71%), Gaps = 10/282 (3%)

Query: 2   KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT 61
           +HPSAL+ F++++ A++GK+IV+FLDYDGTLSPIV+DPDKAFMS  MR  V ++A  FPT
Sbjct: 92  QHPSALEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKCFPT 151

Query: 62  AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
           AIV+GRC+DKV  FV+L  + YAGSHGMDI  PA    ++    ++          + +Q
Sbjct: 152 AIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQS----------LLYQ 201

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
           PA ++LP I E+ + L EK K+  GA VE++KFC SVHFR VDE   + L   V S+++ 
Sbjct: 202 PANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKN 261

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
           +P  +++ G+KV EIRP I+WDKG+ALE+LL++ GF N ++  P+YIGDD+TDEDAFK++
Sbjct: 262 FPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKML 321

Query: 242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKK 283
           R  G G+ I+VS  P++T A YSL+DP EVM FL RL  WK+
Sbjct: 322 RDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQ 363

Length = 366

>gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase

 Score =  192 bits (490), Expect = 8e-61
 Identities = 89/255 (34%), Positives = 123/255 (48%), Gaps = 30/255 (11%)

Query: 25  FLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT--AIVSGRCLDKVSRFVQLKNVV 82
           FLDYDGTLSPIVEDPD A  SD +   ++ +A   P   AI+SGR       F  + N+ 
Sbjct: 1   FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFEDLFFGVPNLG 60

Query: 83  YAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIK 142
            A  HG  I  P G    N                       E L   +E+  +LEE  +
Sbjct: 61  LAAEHGAFIRDPGGEDWTN-------------------LAEVEDLDWKKEVAAILEEYTE 101

Query: 143 TIKGATVEDNKFCISVHFRRVDEDDINT----LQEMVNSIVEAYPNFRISGGKKVMEIRP 198
              G+ +ED K  ++ H+R  D+D        L E + S+++ YP+ R++ GKKV+E+RP
Sbjct: 102 RTPGSYIEDKKSALAWHYRNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRP 161

Query: 199 CIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIR-HMGRGYPIIVSSVP- 256
                KG+A E LL+  G   +    PL IGDD+TDED F V+      G  I V +   
Sbjct: 162 VGVS-KGKAAERLLEELGSAGSPPDFPLCIGDDRTDEDMFDVVNPTKMSGLSIEVGATSV 220

Query: 257 --RETKALYSLRDPD 269
             + + A Y L DP 
Sbjct: 221 GSKPSSAKYFLDDPS 235

This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235

>gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase

 Score =  145 bits (367), Expect = 2e-42
 Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 32/269 (11%)

Query: 19  GKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTA--IVSGRCLDKVSRFV 76
            +K   F DYDGTLS IV DPD A +SD +   + ++A     A  I+SGR   +    V
Sbjct: 1   ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV 60

Query: 77  QLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQV 136
           +L  +  AG HG +       +K N    +             +    E +P  +     
Sbjct: 61  KLPGLGLAGEHGCE-------MKDNGSCQD-------------WVNLTEKIPSWKVRANE 100

Query: 137 LEEKIKTIKGATVEDNKFCISVHFRR--VDEDDINTLQEMVNSIVEAYPNFRISGGKKVM 194
           L E+I T  G  +E     ++ H+R+  V E      +E+   I+    +  +  GK V+
Sbjct: 101 LREEITTRPGVFIERKGVALAWHYRQAPVPELARFRAKELKEKILSF-TDLEVMDGKAVV 159

Query: 195 EIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGR---GYPII 251
           E++P    +KG  ++ LL     +  S   P+Y+GDD TDEDAF+V+ +       YP+ 
Sbjct: 160 ELKP-RFVNKGEIVKRLLWHQPGSGIS---PVYLGDDITDEDAFRVVNNQWGNYGFYPVP 215

Query: 252 VSSVPRETKALYSLRDPDEVMSFLRRLAR 280
           + S  ++T A + L  P +V+ FL  L  
Sbjct: 216 IGSGSKKTVAKFHLTGPQQVLEFLGLLVG 244

Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244

>gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

 Score =  133 bits (337), Expect = 1e-37
 Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 30/266 (11%)

Query: 18  KGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT--AIVSGRCLDKVSRF 75
             +K ++FLDYDGTL+ IV  P+ A   D +   + ++A       AI+SGR L ++ R 
Sbjct: 15  NARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERL 74

Query: 76  VQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQ 135
             +  +     HG ++  P G    N                      +  L  ++E+  
Sbjct: 75  FGVPGIGLIAEHGAEVRDPNGKWWINL-------------------AEEADLRWLKEVAA 115

Query: 136 VLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNF-RISGGKKVM 194
           +LE  ++   G+ +E   F +++H+R   EDD      +  +         R++ GK V+
Sbjct: 116 ILEYYVERTPGSYIERKGFAVALHYRNA-EDDEGAALALAEAATLINELKLRVTPGKMVV 174

Query: 195 EIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSS 254
           E+RP     KG A++Y++D   F+      P++ GDD TDEDAF  +  +     I V  
Sbjct: 175 ELRPPGVS-KGAAIKYIMDELPFDGR---FPIFAGDDLTDEDAFAAVNKLDS---ITVKV 227

Query: 255 VPRETKALYSLRDPDEVMSFLRRLAR 280
               T+A + L      +  L +L  
Sbjct: 228 GVGSTQAKFRLAGVYGFLRSLYKLLE 253

Length = 266

>gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

 Score =  130 bits (328), Expect = 5e-34
 Identities = 77/289 (26%), Positives = 119/289 (41%), Gaps = 49/289 (16%)

Query: 4   PSALDTFDRMVAAAK-GKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPT- 61
           P      + ++A  +   + ++ LDYDGTL P   DP+ A     +R  +  +A    T 
Sbjct: 474 PITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTD 533

Query: 62  -AIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHF 120
            AI+SGR  D + R+     +     HG     P G              + Q  E V  
Sbjct: 534 VAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGG--------------EWQLLEPVAT 579

Query: 121 QPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDI-NTLQEMVNSIV 179
           +      P       +LEE +    G+ +E+ +  ++ H+R  D +       E++ ++ 
Sbjct: 580 EWKDAVRP-------ILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALS 632

Query: 180 EAYPN--FRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDA 237
               N    +  G KV+E+RP    +KGRA+  LL+        DF  L IGDD TDED 
Sbjct: 633 SLLSNAPLEVLRGNKVVEVRPA-GVNKGRAVRRLLEA----GPYDF-VLAIGDDTTDEDM 686

Query: 238 FKVIR------HMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLAR 280
           F+ +        +G G          E++A Y L    EV   LRRL  
Sbjct: 687 FRALPETAITVKVGPG----------ESRARYRLPSQREVRELLRRLLD 725

Length = 726

>gnl|CDD|182291 PRK10187, PRK10187, trehalose-6-phosphate phosphatase; Provisional

 Score = 78.2 bits (193), Expect = 5e-17
 Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 44/263 (16%)

Query: 25  FLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF--PTAIVSGRC---LDKVSRFVQLK 79
           F D DGTL+ I   PD+  + D +   +  +A       A++SGR    LD +++  +  
Sbjct: 18  FFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFP 77

Query: 80  NVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQ--IQEMIQVL 137
               AG HG                 E R ++ +   +VH       LP    +++   L
Sbjct: 78  ---LAGVHGA----------------ERRDINGK-THIVH-------LPDAIARDISVQL 110

Query: 138 EEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIR 197
              +  + GA +E      ++H+R+  + + + L  +   I + +P   +  GK V+EI+
Sbjct: 111 HTALAQLPGAELEAKGMAFALHYRQAPQHE-DALLALAQRITQIWPQLALQPGKCVVEIK 169

Query: 198 P-CIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVP 256
           P   +  KG A+   +    F   +   P+++GDD TDE  F V+  +G    I V    
Sbjct: 170 PRGTN--KGEAIAAFMQEAPFAGRT---PVFVGDDLTDEAGFAVVNRLG---GISVKVGT 221

Query: 257 RETKALYSLRDPDEVMSFLRRLA 279
             T+A + L    +V S+L  + 
Sbjct: 222 GATQASWRLAGVPDVWSWLEMIT 244

Length = 266

>gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB

 Score = 65.9 bits (161), Expect = 7e-13
 Identities = 47/227 (20%), Positives = 78/227 (34%), Gaps = 33/227 (14%)

Query: 23  VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHE-VAHFFPTAIVSGRCLDKVSRFVQLKNV 81
           ++F D DGTL     DP+   +S     A+           +V+GR L ++   ++   +
Sbjct: 1   LLFFDLDGTLL----DPNAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPL 56

Query: 82  VYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKI 141
                +G  I  P   L                          E +  I+E I    + +
Sbjct: 57  PLIAENGALIFYPGEILYIEPSD------------------VFEEILGIKEEIGAELKSL 98

Query: 142 KTI-KGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFR----ISGGKKVMEI 196
                G  +ED    +++H+   +        +M   + +   N      I  GK  +E+
Sbjct: 99  SEHYVGTFIEDKAIAVAIHYVGAELGQ-ELDSKMRERLEKIGRNDLELEAIYVGKTDLEV 157

Query: 197 RPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRH 243
            P    DKG AL+ LL             L  GD   DE+ F+V   
Sbjct: 158 LP-AGVDKGSALQALLKELNGKRDE---ILAFGDSGNDEEMFEVAGL 200

This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204

>gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming]

 Score = 50.0 bits (119), Expect = 7e-07
 Identities = 68/287 (23%), Positives = 115/287 (40%), Gaps = 40/287 (13%)

Query: 9   TFDRMVAAAKGKKI-VVFLDYDGTLSP---IVEDPDKAFMSDTMRMAVHEVAHFFPTAIV 64
           + + +V+A K      + LDYDGTL P   I + P    +     +   +    F   IV
Sbjct: 583 SMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVF---IV 639

Query: 65  SGRCLDKVSR-FVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPA 123
           S R    ++  F   + +  A  HG  +        + + + ET               A
Sbjct: 640 SARSRKTLADWFSPCEKLGIAAEHGYFLRL------KRDVEWETCV-----------PVA 682

Query: 124 QEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDED----DINTLQEMVNSIV 179
                QI E   V++   +T  G+T+ED +  +   +   D D        L + + S++
Sbjct: 683 DCSWKQIAE--PVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVL 740

Query: 180 EAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFK 239
              P   +  G+ ++E++P     KG   + LL             L IGDD++DED F+
Sbjct: 741 ANEP-VTVKSGQNIVEVKP-QGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFE 798

Query: 240 VIRHMGRGYPI------IVSSVPRE-TKALYSLRDPDEVMSFLRRLA 279
           VI     G  I         +V ++ +KA Y L D  E++  ++ LA
Sbjct: 799 VITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLA 845

Length = 854

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	288
PLN02580	384	trehalose-phosphatase	100.0
PLN03017	366	trehalose-phosphatase	100.0
PLN02151	354	trehalose-phosphatase	100.0
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	100.0
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	100.0
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	100.0
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	100.0
PRK10976	266	putative hydrolase; Provisional	100.0
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	100.0
PRK10513	270	sugar phosphate phosphatase; Provisional	100.0
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	100.0
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	100.0
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	100.0
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	100.0
PRK01158	230	phosphoglycolate phosphatase; Provisional	100.0
PLN02887	580	hydrolase family protein	100.0
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.97
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	99.97
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	99.97
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	99.97
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	99.97
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.97
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	99.97
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	99.97
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	99.97
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.96
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	99.96
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	99.96
PLN02382	413	probable sucrose-phosphatase	99.95
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	99.95
PTZ00174	247	phosphomannomutase; Provisional	99.95
PLN02423	245	phosphomannomutase	99.94
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	99.94
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	99.94
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.91
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	99.91
KOG1050	732	consensus Trehalose-6-phosphate synthase component	99.86
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	99.79
KOG3189	252	consensus Phosphomannomutase [Lipid transport and	99.54
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	99.45
PF03332	220	PMM: Eukaryotic phosphomannomutase; InterPro: IPR0	99.26
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.24
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.22
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	99.0
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.98
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	98.81
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	98.66
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	98.6
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.59
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	98.56
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.39
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	98.05
COG0546	220	Gph Predicted phosphatases [General function predi	98.03
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	98.0
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	97.89
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	97.89
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	97.85
PRK10444	248	UMP phosphatase; Provisional	97.82
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	97.7
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	97.68
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	97.68
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	97.62
PLN02645	311	phosphoglycolate phosphatase	97.62
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	97.32
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	97.25
PRK10671	834	copA copper exporting ATPase; Provisional	97.24
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	97.2
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	97.17
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	97.13
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	97.13
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	97.09
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	97.08
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	97.07
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	97.06
PF06437	408	ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0	96.98
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	96.97
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	96.96
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	96.93
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	96.91
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	96.88
PRK13222	226	phosphoglycolate phosphatase; Provisional	96.87
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	96.85
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	96.85
PHA02530	300	pseT polynucleotide kinase; Provisional	96.85
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	96.85
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	96.84
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	96.81
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	96.8
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	96.8
PRK13582	205	thrH phosphoserine phosphatase; Provisional	96.77
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	96.77
PLN02954	224	phosphoserine phosphatase	96.7
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	96.69
KOG1050	732	consensus Trehalose-6-phosphate synthase component	96.65
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	96.64
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	96.63
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	96.59
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	96.51
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	96.47
COG4087	152	Soluble P-type ATPase [General function prediction	96.44
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	96.44
PLN02954	224	phosphoserine phosphatase	96.43
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	96.37
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	96.36
PRK13223	272	phosphoglycolate phosphatase; Provisional	96.3
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	96.3
PRK13225	273	phosphoglycolate phosphatase; Provisional	96.28
PRK06769	173	hypothetical protein; Validated	96.24
PRK01122	679	potassium-transporting ATPase subunit B; Provision	96.24
PTZ00445	219	p36-lilke protein; Provisional	96.2
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	96.2
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	96.13
COG4030	315	Uncharacterized protein conserved in archaea [Func	96.12
PRK15122	903	magnesium-transporting ATPase; Provisional	96.11
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	96.09
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	96.05
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	96.04
KOG0210	1051	consensus P-type ATPase [Inorganic ion transport a	96.02
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	95.98
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	95.97
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	95.95
PRK14010	673	potassium-transporting ATPase subunit B; Provision	95.93
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	95.93
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	95.92
PRK13226	229	phosphoglycolate phosphatase; Provisional	95.89
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	95.88
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	95.86
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	95.86
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	95.85
PRK13288	214	pyrophosphatase PpaX; Provisional	95.79
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	95.79
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	95.78
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	95.73
PRK08238	479	hypothetical protein; Validated	95.69
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	95.65
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	95.57
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	95.56
PRK11590	211	hypothetical protein; Provisional	95.56
PRK13582	205	thrH phosphoserine phosphatase; Provisional	95.55
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	95.55
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	95.5
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	95.48
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	95.33
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	95.33
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	95.31
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	95.23
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	95.13
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	95.13
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	95.1
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	95.06
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	95.01
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	95.01
PRK13222	226	phosphoglycolate phosphatase; Provisional	94.93
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	94.84
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	94.83
PLN03190	1178	aminophospholipid translocase; Provisional	94.78
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	94.65
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	94.64
PLN02940	382	riboflavin kinase	94.44
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	94.37
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	94.37
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	94.36
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	94.28
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	94.25
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	94.23
COG0241	181	HisB Histidinol phosphatase and related phosphatas	94.18
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	94.09
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	93.99
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	93.87
PRK11587	218	putative phosphatase; Provisional	93.81
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	93.78
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	93.76
PLN02575	381	haloacid dehalogenase-like hydrolase	93.71
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	93.63
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	93.59
PRK14988	224	GMP/IMP nucleotidase; Provisional	93.58
PRK10748	238	flavin mononucleotide phosphatase; Provisional	93.55
PRK13288	214	pyrophosphatase PpaX; Provisional	93.45
PRK11590	211	hypothetical protein; Provisional	93.42
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	93.42
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	93.28
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	93.24
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	93.2
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	93.19
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	92.95
COG3700	237	AphA Acid phosphatase (class B) [General function	92.93
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	92.92
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	92.83
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	92.76
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	92.65
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	92.65
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	92.49
PRK06769	173	hypothetical protein; Validated	92.42
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	92.37
PLN02575	381	haloacid dehalogenase-like hydrolase	92.18
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	92.17
PRK14988	224	GMP/IMP nucleotidase; Provisional	92.02
PHA02597	197	30.2 hypothetical protein; Provisional	91.98
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	91.93
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	91.87
PRK13225	273	phosphoglycolate phosphatase; Provisional	91.81
COG4359	220	Uncharacterized conserved protein [Function unknow	91.66
PRK13223	272	phosphoglycolate phosphatase; Provisional	91.65
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	91.58
PRK13226	229	phosphoglycolate phosphatase; Provisional	91.53
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	91.44
PRK11587	218	putative phosphatase; Provisional	91.32
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	91.12
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	90.99
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	90.82
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	90.55
PRK09449	224	dUMP phosphatase; Provisional	90.27
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	90.23
PRK10563	221	6-phosphogluconate phosphatase; Provisional	90.22
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	90.13
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	90.05
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	89.99
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	89.92
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	89.62
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	89.3
KOG0206	1151	consensus P-type ATPase [General function predicti	89.22
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	89.09
PRK09449	224	dUMP phosphatase; Provisional	88.79
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	88.73
COG4087	152	Soluble P-type ATPase [General function prediction	88.68
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	88.61
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	88.38
KOG2116	738	consensus Protein involved in plasmid maintenance/	87.37
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	87.34
PLN02645	311	phosphoglycolate phosphatase	87.06
PLN02177	497	glycerol-3-phosphate acyltransferase	87.0
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	86.78
KOG1618	389	consensus Predicted phosphatase [General function	85.94
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	85.48
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	85.39
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	85.33
PRK08238	479	hypothetical protein; Validated	85.25
COG4996	164	Predicted phosphatase [General function prediction	84.3
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	84.22
KOG0203	1019	consensus Na+/K+ ATPase, alpha subunit [Inorganic	84.17
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	84.04
PHA02597	197	30.2 hypothetical protein; Provisional	83.76
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	83.42
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	83.25
PLN02940	382	riboflavin kinase	82.76
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	82.47
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	81.36
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	81.22
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	81.08
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	80.75
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	80.71
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	80.57

>PLN02580 trehalose-phosphatase

Probab=100.00  E-value=1.5e-46  Score=337.92  Aligned_cols=283  Identities=56%  Similarity=0.979  Sum_probs=236.3

Q ss_pred             CCccchhhHHHHHHhhcCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhcCCCCe
Q 040896            2 KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKNV   81 (288)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~~~~~~   81 (288)
                      |||||+..||+|...+.++++++|+||||||.++..+|+...++++++++|++|.+...++|+|||++..+.++++.+++
T Consensus       100 ~~p~al~~~~~~~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~~~l  179 (384)
T PLN02580        100 KYPSALTSFEQIANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGLTEL  179 (384)
T ss_pred             hCcHHHHHHHHHHHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCCCCc
Confidence            79999999999999999999999999999999999999999999999999999999989999999999999999998889


Q ss_pred             EEEccCceeEeCCCCCcc-cCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEec
Q 040896           82 VYAGSHGMDISTPAGSLK-QNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHF  160 (288)
Q Consensus        82 ~~i~~nGa~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  160 (288)
                      +++|+||+++..+.+... ..|. .++...+..+.++..+++..+|...++++.+.+.++.+..+|.++|.+.++++|||
T Consensus       180 ~laGsHG~e~~~p~~~~~~~~~~-~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHY  258 (384)
T PLN02580        180 YYAGSHGMDIMGPVRESVSNDHP-NCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHY  258 (384)
T ss_pred             cEEEeCCceeecCCCCccccccc-ccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEe
Confidence            999999999987644221 1232 12222222233343344555555566777777777778889999999999999999


Q ss_pred             cCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeC-CCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHH
Q 040896          161 RRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRP-CIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFK  239 (288)
Q Consensus       161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~-~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~  239 (288)
                      |++++..+..+.+.+++.+..++++.+..|+.++||.| . ++|||.||++|++.++++......+++|||+.||++||+
T Consensus       259 R~a~~~~~~~~~~~l~~~l~~~~~l~v~~Gk~vlEVrP~~-g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~  337 (384)
T PLN02580        259 RNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRKVLEVRPVI-DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFK  337 (384)
T ss_pred             CCCCchHHHHHHHHHHHHHHhCCceEEEeCCeEEEEecCC-CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHH
Confidence            99886656667777777777777788888999999999 7 999999999999999987531113599999999999999


Q ss_pred             HHHhcCCceEEEEecCCCCccceEEeCChhHHHHHHHHHHHHhhhCC
Q 040896          240 VIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKSLG  286 (288)
Q Consensus       240 ~~~~~~~g~~v~v~na~~~~~A~~~~~~~~~v~~~l~~~~~~~~~~~  286 (288)
                      .++..+.|++|+|+|+..++.|+|.+.++++|.++|+.++.|++.++
T Consensus       338 ~L~~~~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~~~~  384 (384)
T PLN02580        338 VLREGNRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKKSEA  384 (384)
T ss_pred             hhhccCCceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhhcCC
Confidence            98765458999999998899999999999999999999999998763

>PLN03017 trehalose-phosphatase

Probab=100.00  E-value=4.7e-44  Score=319.03  Aligned_cols=273  Identities=54%  Similarity=0.985  Sum_probs=228.6

Q ss_pred             CCccchhhHHHHHHhhcCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhcCCCCe
Q 040896            2 KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKNV   81 (288)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~~~~~~   81 (288)
                      +||||+..||++...+..++.+||+||||||++...+|+...++++++++|++|.+...|+|+|||++..+.+++++.+.
T Consensus        92 ~~psal~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~l~~l  171 (366)
T PLN03017         92 QHPSALEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVKLAEL  171 (366)
T ss_pred             hCChHHHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhcccCc
Confidence            79999999999999999999999999999999776656666899999999999996679999999999999999877778


Q ss_pred             EEEccCceeEeCCCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEecc
Q 040896           82 VYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFR  161 (288)
Q Consensus        82 ~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  161 (288)
                      +++|+||+++..+++... .|.         .+.++...++..+|...++.+.+.+.++.+.++|.++|.++++++||||
T Consensus       172 ~l~g~hGa~i~~p~~~~~-~~~---------~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR  241 (366)
T PLN03017        172 YYAGSHGMDIKGPAKGFS-RHK---------RVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFR  241 (366)
T ss_pred             eEEEcCCcEEecCCCcce-ecc---------ccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcC
Confidence            999999999987654321 010         0111122334444555667777777777788999999999999999999


Q ss_pred             CCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          162 RVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      ++++..+.++...++..++.++++.+..|+..+||.|.+++|||.|+++|++.+++.....+.++++||+..|++||+.+
T Consensus       242 ~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L  321 (366)
T PLN03017        242 CVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKML  321 (366)
T ss_pred             cCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHH
Confidence            98876556677777777887877899999999999994489999999999999987643234799999999999999999


Q ss_pred             HhcCCceEEEEecCCCCccceEEeCChhHHHHHHHHHHHHhhh
Q 040896          242 RHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKS  284 (288)
Q Consensus       242 ~~~~~g~~v~v~na~~~~~A~~~~~~~~~v~~~l~~~~~~~~~  284 (288)
                      +..++|++|.||....++.|.|.+.++++|.++|+.++.|++.
T Consensus       322 ~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~~  364 (366)
T PLN03017        322 RDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQM  364 (366)
T ss_pred             hhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHhh
Confidence            8766689999998766799999999999999999999999875

>PLN02151 trehalose-phosphatase

Probab=100.00  E-value=1.3e-42  Score=308.95  Aligned_cols=274  Identities=55%  Similarity=0.956  Sum_probs=228.5

Q ss_pred             CCCccchhhHHHHHHhhcCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhcCCCC
Q 040896            1 AKHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKN   80 (288)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~~~~~   80 (288)
                      .+||||+..||++...++.++.++|+||||||++...+|+...++++++++|++|.+...|+|+|||++..+.+++++++
T Consensus        78 ~~~p~a~~~~~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~~~~  157 (354)
T PLN02151         78 KEHPSALNMFEEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVKLTE  157 (354)
T ss_pred             HhCChHHHHHHHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcCCcc
Confidence            37999999999999999999999999999999998888888899999999999999778999999999999999999888


Q ss_pred             eEEEccCceeEeCCCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEec
Q 040896           81 VVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHF  160 (288)
Q Consensus        81 ~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  160 (288)
                      ++++|+||+++..+++..  .|.+.         ..+...++..+|...+..+.+.+.+..+.++|.++|.+.++++|||
T Consensus       158 l~laGsHG~e~~~p~~g~--~~~~~---------~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHY  226 (354)
T PLN02151        158 LYYAGSHGMDIKGPEQGS--KYKKE---------NQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHF  226 (354)
T ss_pred             ceEEEeCCceeecCCCCc--ccccc---------ccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEe
Confidence            999999999988764321  12110         0111123344444556666677766667899999999999999999


Q ss_pred             cCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHH
Q 040896          161 RRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKV  240 (288)
Q Consensus       161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~  240 (288)
                      |++++..+..+.+.+++++..++++.+..|+..+||.|..++|||.|+++|++.+++.......++++||+..|++||+.
T Consensus       227 R~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~  306 (354)
T PLN02151        227 RCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKI  306 (354)
T ss_pred             CCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHH
Confidence            99876545556667777777777788999999999999438999999999999988764322368999999999999999


Q ss_pred             HHhcCCceEEEEecCCCCccceEEeCChhHHHHHHHHHHHHhhhC
Q 040896          241 IRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWKKSL  285 (288)
Q Consensus       241 ~~~~~~g~~v~v~na~~~~~A~~~~~~~~~v~~~l~~~~~~~~~~  285 (288)
                      ++..++|+||.|+....++.|+|.+.++++|.++|+.++.|++.+
T Consensus       307 L~~~~~G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~~~  351 (354)
T PLN02151        307 LRDKKQGLGILVSKYAKETNASYSLQEPDEVMEFLERLVEWKQLR  351 (354)
T ss_pred             HhhcCCCccEEeccCCCCCcceEeCCCHHHHHHHHHHHHHhhhcc
Confidence            987656899999977778999999999999999999999998764

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=100.00  E-value=3.2e-37  Score=269.59  Aligned_cols=233  Identities=24%  Similarity=0.433  Sum_probs=187.4

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc--CCEEEEcCCChhhHhhhcCCCCeEEEccCceeEeCCCCC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF--FPTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGS   97 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~--~~v~i~TGR~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~   97 (288)
                      .+.+||+||||||++...+|++..++++++++|++|++.  ..|+|+|||++..+.++++....+++|+||++++..++.
T Consensus        13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~   92 (266)
T PRK10187         13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGK   92 (266)
T ss_pred             CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCC
Confidence            368999999999999777777889999999999999984  489999999999999998755577999999999876544


Q ss_pred             cccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCCcccHHHHHHHHH-
Q 040896           98 LKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVN-  176 (288)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~-  176 (288)
                      +..                   .....   .+...+.+.+.++.++.+|.++|.+..++.+||++.+..  ......+. 
T Consensus        93 ~~~-------------------~~l~~---~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~  148 (266)
T PRK10187         93 THI-------------------VHLPD---AIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQ  148 (266)
T ss_pred             eee-------------------ccCCh---hHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHH
Confidence            210                   01111   234455555655566788999999998899999876422  23333443 


Q ss_pred             HHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCC
Q 040896          177 SIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVP  256 (288)
Q Consensus       177 ~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~  256 (288)
                      .+.+.++.+.+.+++.++||.|+ ++|||.||+++++++++..+   .+++|||+.||++||+++++.+ |++|+|||+ 
T Consensus       149 ~i~~~~~~~~~~~g~~~lEi~p~-g~~Kg~al~~ll~~~~~~~~---~v~~~GD~~nD~~mf~~~~~~~-g~~vavg~a-  222 (266)
T PRK10187        149 RITQIWPQLALQPGKCVVEIKPR-GTNKGEAIAAFMQEAPFAGR---TPVFVGDDLTDEAGFAVVNRLG-GISVKVGTG-  222 (266)
T ss_pred             HHHhhCCceEEeCCCEEEEeeCC-CCCHHHHHHHHHHhcCCCCC---eEEEEcCCccHHHHHHHHHhcC-CeEEEECCC-
Confidence            34445554667889999999999 99999999999999999877   9999999999999999997654 899999988 


Q ss_pred             CCccceEEeCChhHHHHHHHHHHHHhh
Q 040896          257 RETKALYSLRDPDEVMSFLRRLARWKK  283 (288)
Q Consensus       257 ~~~~A~~~~~~~~~v~~~l~~~~~~~~  283 (288)
                       .+.|+|+++++++|..+|+.++..++
T Consensus       223 -~~~A~~~l~~~~~v~~~L~~l~~~~~  248 (266)
T PRK10187        223 -ATQASWRLAGVPDVWSWLEMITTAQQ  248 (266)
T ss_pred             -CCcCeEeCCCHHHHHHHHHHHHHhhh
Confidence             46699999999999999999987654

>TIGR00685 T6PP trehalose-phosphatase

Probab=100.00  E-value=4.8e-34  Score=247.07  Aligned_cols=236  Identities=31%  Similarity=0.434  Sum_probs=179.5

Q ss_pred             CCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC--CEEEEcCCChhhHhhhcCCCCeEEEccCceeEeCCCC
Q 040896           19 GKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF--PTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAG   96 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~--~v~i~TGR~~~~l~~~~~~~~~~~i~~nGa~i~~~~~   96 (288)
                      +++++||+||||||++...+|....++++++++|++|.+++  .|+|+|||+...+...+.+++++++|+||++++.+ +
T Consensus         1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~hG~~~~~~-g   79 (244)
T TIGR00685         1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEHGCEMKDN-G   79 (244)
T ss_pred             CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeecCEEEecC-C
Confidence            46799999999999998777777889999999999999884  67899999998888877778899999999998863 3


Q ss_pred             CcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCC-CcccHHH-HHHH
Q 040896           97 SLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRV-DEDDINT-LQEM  174 (288)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-~~~~~~~-~~~~  174 (288)
                      ... .|..                 +......|.+...+ +..+....+|.++|.++.+++|||+.+ +++.... ..+.
T Consensus        80 ~~~-~~~~-----------------~~~~~~~~~~~~~~-l~~~~~~~pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~  140 (244)
T TIGR00685        80 SCQ-DWVN-----------------LTEKIPSWKVRANE-LREEITTRPGVFIERKGVALAWHYRQAPVPELARFRAKEL  140 (244)
T ss_pred             Ccc-eeee-----------------chhhhhhHHHHHHH-HHHHHhcCCCcEEEecceEEEEEeccCCCcHHHHHHHHHH
Confidence            321 1210                 11100123222222 322333449999999999999999987 3332222 1222


Q ss_pred             HHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcC---CceEEE
Q 040896          175 VNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMG---RGYPII  251 (288)
Q Consensus       175 l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~---~g~~v~  251 (288)
                      +.++.... ++.+..++.++|+.|+ ++|||.+++++++.+++..+   .+++|||+.||++||+.++.+.   .+++|.
T Consensus       141 ~~~~~~~~-~~~v~~g~~~~e~~p~-~~~Kg~a~~~~~~~~~~~~~---~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~  215 (244)
T TIGR00685       141 KEKILSFT-DLEVMDGKAVVELKPR-FVNKGEIVKRLLWHQPGSGI---SPVYLGDDITDEDAFRVVNNQWGNYGFYPVP  215 (244)
T ss_pred             HHHHhcCC-CEEEEECCeEEEEeeC-CCCHHHHHHHHHHhcccCCC---ceEEEcCCCcHHHHHHHHhcccCCCCeEEEE
Confidence            33333322 5788889999999999 99999999999999998776   9999999999999999994321   268999


Q ss_pred             EecCCCCccceEEeCChhHHHHHHHHHH
Q 040896          252 VSSVPRETKALYSLRDPDEVMSFLRRLA  279 (288)
Q Consensus       252 v~na~~~~~A~~~~~~~~~v~~~l~~~~  279 (288)
                      |+.+..++.|+|+++++++|..+|+.++
T Consensus       216 v~~g~~~~~A~~~~~~~~~v~~~L~~l~  243 (244)
T TIGR00685       216 IGSGSKKTVAKFHLTGPQQVLEFLGLLV  243 (244)
T ss_pred             EecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence            9766667899999999999999998875

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=100.00  E-value=1.3e-33  Score=278.23  Aligned_cols=241  Identities=29%  Similarity=0.423  Sum_probs=192.4

Q ss_pred             hhHHHHHHhh-cCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc--CCEEEEcCCChhhHhhhcCCCCeEEE
Q 040896            8 DTFDRMVAAA-KGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF--FPTAIVSGRCLDKVSRFVQLKNVVYA   84 (288)
Q Consensus         8 ~~~~~~~~~~-~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~--~~v~i~TGR~~~~l~~~~~~~~~~~i   84 (288)
                      ++++.+..++ .+++++|+||+||||++....+....++++++++|++|+++  ..|+|+|||++..+.++++..++++|
T Consensus       478 ~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~li  557 (726)
T PRK14501        478 AAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLV  557 (726)
T ss_pred             cCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEE
Confidence            4688999997 57889999999999998765556678899999999999995  48999999999999999875568899


Q ss_pred             ccCceeEeCCCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCC
Q 040896           85 GSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVD  164 (288)
Q Consensus        85 ~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  164 (288)
                      ++||++++.+++.+..    .              ....   ..|.+.+.+.+..+.+..+|.+++.+..+++|+|++.+
T Consensus       558 aenG~~i~~~~~~w~~----~--------------~~~~---~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d  616 (726)
T PRK14501        558 AEHGAWSRAPGGEWQL----L--------------EPVA---TEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNAD  616 (726)
T ss_pred             EeCCEEEeCCCCceEE----C--------------CCcc---hhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCC
Confidence            9999999876554220    0              0111   24666677777777778899999999999999999877


Q ss_pred             cccHHH----HHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHH
Q 040896          165 EDDINT----LQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKV  240 (288)
Q Consensus       165 ~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~  240 (288)
                      ++....    +.+.++..+... .+.+.+|+.++||.|+ ++|||.|++++++  +++.+   .+++|||+.||++||+.
T Consensus       617 ~~~~~~~a~~l~~~l~~~~~~~-~~~v~~g~~~veV~p~-~vnKG~al~~ll~--~~~~d---~vl~~GD~~nDe~Mf~~  689 (726)
T PRK14501        617 PELGEARANELILALSSLLSNA-PLEVLRGNKVVEVRPA-GVNKGRAVRRLLE--AGPYD---FVLAIGDDTTDEDMFRA  689 (726)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC-CeEEEECCeEEEEEEC-CCCHHHHHHHHHh--cCCCC---EEEEECCCCChHHHHHh
Confidence            554332    233333333332 4777789999999999 9999999999999  45555   99999999999999999


Q ss_pred             HHhcCCceEEEEecCCCCccceEEeCChhHHHHHHHHHHH
Q 040896          241 IRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLAR  280 (288)
Q Consensus       241 ~~~~~~g~~v~v~na~~~~~A~~~~~~~~~v~~~l~~~~~  280 (288)
                      ++.  .|++|+|||+  ++.|+|+++++++|..+|+.++.
T Consensus       690 ~~~--~~~~v~vG~~--~s~A~~~l~~~~eV~~~L~~l~~  725 (726)
T PRK14501        690 LPE--TAITVKVGPG--ESRARYRLPSQREVRELLRRLLD  725 (726)
T ss_pred             ccc--CceEEEECCC--CCcceEeCCCHHHHHHHHHHHhc
Confidence            842  2689999874  68999999999999999998864

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=100.00  E-value=3.7e-34  Score=250.69  Aligned_cols=223  Identities=21%  Similarity=0.268  Sum_probs=150.0

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPA   95 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~   95 (288)
                      ..|+|++||||||++     +++.++++++++|+++++++ .|+|||||++..+.+++   ++. .++||+||++|+.+ 
T Consensus         2 ~~kli~~DlDGTLl~-----~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~-~~~I~~NGa~i~~~-   74 (264)
T COG0561           2 MIKLLAFDLDGTLLD-----SNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLD-GPLITFNGALIYNG-   74 (264)
T ss_pred             CeeEEEEcCCCCccC-----CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC-ccEEEeCCeEEecC-
Confidence            368999999999999     56679999999999999995 99999999999999876   443 37999999999998 


Q ss_pred             CCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCc-----------------eEEE
Q 040896           96 GSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKF-----------------CISV  158 (288)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-----------------~~~~  158 (288)
                      ++....                  .....   .....+...+.... ............                 ...+
T Consensus        75 ~~~i~~------------------~~l~~---~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (264)
T COG0561          75 GELLFQ------------------KPLSR---EDVEELLELLEDFQ-GIALVLYTDDGIYLTKKRGTFAEARIGFANLSP  132 (264)
T ss_pred             CcEEee------------------ecCCH---HHHHHHHHHHHhcc-CceEEEEeccceeeccCCCcccccccccccccc
Confidence            432210                  01111   22333333332210 000000000000                 0000


Q ss_pred             ecc---CCCc------ccHHHHHHHHHHHH-HhCC--CeEEeCC-ceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCcee
Q 040896          159 HFR---RVDE------DDINTLQEMVNSIV-EAYP--NFRISGG-KKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLP  225 (288)
Q Consensus       159 ~~~---~~~~------~~~~~~~~~l~~~~-~~~~--~~~~~~~-~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~v  225 (288)
                      ...   ....      .........+.+.+ +.++  .+.+.++ ..++||+|+ |+|||.||++|++++|++.+   +|
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~-g~~K~~al~~l~~~lgi~~~---~v  208 (264)
T COG0561         133 VGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISLDITPK-GVSKGYALQRLAKLLGIKLE---EV  208 (264)
T ss_pred             cccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCceEEEecC-CCchHHHHHHHHHHhCCCHH---He
Confidence            000   0000      00012223333322 3343  2445555 445999999 99999999999999999977   99


Q ss_pred             EEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeC--ChhHHHHHHHHHHH
Q 040896          226 LYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLR--DPDEVMSFLRRLAR  280 (288)
Q Consensus       226 v~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~~~~v~~~l~~~~~  280 (288)
                      ++||||.||++||+++     |+||+|+||.+  +..|++++.  +.+||+++|++++.
T Consensus       209 ~afGD~~ND~~Ml~~a-----g~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~  262 (264)
T COG0561         209 IAFGDSTNDIEMLEVA-----GLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL  262 (264)
T ss_pred             EEeCCccccHHHHHhc-----CeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence            9999999999999999     99999999965  468887765  47899999998864

>PRK10976 putative hydrolase; Provisional

Probab=100.00  E-value=4.7e-34  Score=250.22  Aligned_cols=239  Identities=15%  Similarity=0.163  Sum_probs=147.2

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcC-CC-CeEEEccCceeEeCCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ-LK-NVVYAGSHGMDISTPAGS   97 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~-~~-~~~~i~~nGa~i~~~~~~   97 (288)
                      .|+|++||||||++     +++.+++.++++|++|++++ +|+|||||++..+.+++. +. ..++||+||+.|+..++.
T Consensus         2 ikli~~DlDGTLl~-----~~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~   76 (266)
T PRK10976          2 YQVVASDLDGTLLS-----PDHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGN   76 (266)
T ss_pred             ceEEEEeCCCCCcC-----CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCC
Confidence            48999999999998     45689999999999999995 999999999999888652 21 357899999999975443


Q ss_pred             cccC--CCCC-cccccccC----CCceeccCCCccchh-HHHHHHHHHHHHhhccCCe---EEEec-CceEEEeccCCCc
Q 040896           98 LKQN--NPKH-ETRTVDEQ----GNEVVHFQPAQEFLP-QIQEMIQVLEEKIKTIKGA---TVEDN-KFCISVHFRRVDE  165 (288)
Q Consensus        98 ~~~~--~~~~-~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~e~~-~~~~~~~~~~~~~  165 (288)
                      ....  .... ..+.+...    ......+.....+.. ...................   ..... ...+.+...  +.
T Consensus        77 ~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~--~~  154 (266)
T PRK10976         77 LIFSHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCD--SH  154 (266)
T ss_pred             EehhhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcC--CH
Confidence            2210  0000 00000000    000000000000000 0000000010000000000   00000 011111111  11


Q ss_pred             ccHHHHHHHHHHHH-HhCC-CeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHH
Q 040896          166 DDINTLQEMVNSIV-EAYP-NFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIR  242 (288)
Q Consensus       166 ~~~~~~~~~l~~~~-~~~~-~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~  242 (288)
                          ...+.+.+.+ +.+. .+.+ .++..++||+|+ ++|||+||++|++++|++.+   ++++|||+.||++||+.+ 
T Consensus       155 ----~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~-gvsKg~al~~l~~~lgi~~~---~viafGD~~NDi~Ml~~a-  225 (266)
T PRK10976        155 ----EKLLPLEQAINARWGDRVNVSFSTLTCLEVMAG-GVSKGHALEAVAKKLGYSLK---DCIAFGDGMNDAEMLSMA-  225 (266)
T ss_pred             ----HHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcC-CCChHHHHHHHHHHcCCCHH---HeEEEcCCcccHHHHHHc-
Confidence                1122233322 2332 3554 456789999999 99999999999999999988   999999999999999999 


Q ss_pred             hcCCceEEEEecCCCC--ccce--EEeC--ChhHHHHHHHHHH
Q 040896          243 HMGRGYPIIVSSVPRE--TKAL--YSLR--DPDEVMSFLRRLA  279 (288)
Q Consensus       243 ~~~~g~~v~v~na~~~--~~A~--~~~~--~~~~v~~~l~~~~  279 (288)
                          |+||||+||.++  .+|+  +++.  +.+||+++|++++
T Consensus       226 ----g~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~  264 (266)
T PRK10976        226 ----GKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY  264 (266)
T ss_pred             ----CCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence                899999999874  5766  6765  5789999999886

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=100.00  E-value=1.6e-33  Score=247.57  Aligned_cols=228  Identities=15%  Similarity=0.249  Sum_probs=149.5

Q ss_pred             CCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCC
Q 040896           19 GKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTP   94 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~   94 (288)
                      +.+++||+||||||++     +++.+++.++++|++|++++ +|+|||||++..+.+++   +++..++||+||+.|+.+
T Consensus         5 ~~~~lI~~DlDGTLL~-----~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~   79 (271)
T PRK03669          5 QDPLLIFTDLDGTLLD-----SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLD   79 (271)
T ss_pred             CCCeEEEEeCccCCcC-----CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEec
Confidence            5689999999999998     45678999999999999995 99999999999998874   454457999999999975


Q ss_pred             CCCc-ccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhh---------------ccCCeE-----E-Eec
Q 040896           95 AGSL-KQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIK---------------TIKGAT-----V-EDN  152 (288)
Q Consensus        95 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~-----~-e~~  152 (288)
                      .+.. ...+. ...            .....   ..+..+.+.+.....               ...+..     . ...
T Consensus        80 ~~~~~~~~~~-~~~------------~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (271)
T PRK03669         80 EQWQDHPDFP-RII------------SGISH---GEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLH  143 (271)
T ss_pred             CcccCCCCce-Eee------------cCCCH---HHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhcc
Confidence            3311 00000 000            00000   011111111111000               000000     0 000


Q ss_pred             CceEEEeccCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCC---CCCCCceeEEEc
Q 040896          153 KFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGF---NNASDFLPLYIG  229 (288)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~---~~~~~~~vv~~G  229 (288)
                      .....+.+.. +    ......+.+.+... ++.+.++..++||+|+ ++|||.|+++|++++|+   +.+   ++++||
T Consensus       144 ~~~~~~~~~~-~----~~~~~~~~~~l~~~-~~~~~~~~~~iEi~~~-g~sKg~al~~l~~~lgi~~~~~~---~viafG  213 (271)
T PRK03669        144 EASVTLIWRD-S----DERMAQFTARLAEL-GLQFVQGARFWHVLDA-SAGKDQAANWLIATYQQLSGTRP---TTLGLG  213 (271)
T ss_pred             ccCceeEecC-C----HHHHHHHHHHHHHC-CCEEEecCeeEEEecC-CCCHHHHHHHHHHHHHhhcCCCc---eEEEEc
Confidence            0001111111 1    12223333333332 4665555579999999 99999999999999999   877   999999


Q ss_pred             CCcccHHHHHHHHhcCCceEEEEecCCC-C-------ccceEEeC--ChhHHHHHHHHHHHHh
Q 040896          230 DDKTDEDAFKVIRHMGRGYPIIVSSVPR-E-------TKALYSLR--DPDEVMSFLRRLARWK  282 (288)
Q Consensus       230 Ds~ND~~Ml~~~~~~~~g~~v~v~na~~-~-------~~A~~~~~--~~~~v~~~l~~~~~~~  282 (288)
                      ||.||++||+++     |+||+|+|+.. .       ..|+|++.  +.+|+.+.|+++++.|
T Consensus       214 Ds~NDi~Ml~~a-----g~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~  271 (271)
T PRK03669        214 DGPNDAPLLDVM-----DYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSAR  271 (271)
T ss_pred             CCHHHHHHHHhC-----CEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhcC
Confidence            999999999999     89999998762 1       26888887  4779999999998764

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=100.00  E-value=1.1e-33  Score=248.38  Aligned_cols=217  Identities=14%  Similarity=0.180  Sum_probs=146.1

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCC--CeEEEccCceeEeCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLK--NVVYAGSHGMDISTP   94 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~--~~~~i~~nGa~i~~~   94 (288)
                      .|+|++||||||++     +++.++++++++|++|++++ .|+|||||++..+.+++   ++.  ..++||+||+.|+..
T Consensus         3 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~   77 (270)
T PRK10513          3 IKLIAIDMDGTLLL-----PDHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA   77 (270)
T ss_pred             eEEEEEecCCcCcC-----CCCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence            68999999999998     46789999999999999995 99999999999988765   442  247999999999863


Q ss_pred             -CCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHH----------------------------HhhccC
Q 040896           95 -AGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEE----------------------------KIKTIK  145 (288)
Q Consensus        95 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~  145 (288)
                       ++.....  ..                ...   .....+.+.+..                            +....+
T Consensus        78 ~~~~~i~~--~~----------------l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (270)
T PRK10513         78 ADGETVAQ--TA----------------LSY---DDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIP  136 (270)
T ss_pred             CCCCEEEe--cC----------------CCH---HHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCC
Confidence             3332210  00                000   001111111110                            000000


Q ss_pred             CeE-----EEe--cCceEEEeccCCCcccHHHHHHHHHH-HHHhC-CCeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhc
Q 040896          146 GAT-----VED--NKFCISVHFRRVDEDDINTLQEMVNS-IVEAY-PNFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTF  215 (288)
Q Consensus       146 ~~~-----~e~--~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~-~~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~  215 (288)
                      ...     +..  ....+.+ +.  ++    ...+.+.+ +.+.+ ..+.+ .++..++||+|+ |+|||+||++|++++
T Consensus       137 ~~~~~~~~~~~~~~~~k~~~-~~--~~----~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~-gvsKg~al~~l~~~~  208 (270)
T PRK10513        137 LVFREVEKMDPNLQFPKVMM-ID--EP----EILDAAIARIPAEVKERYTVLKSAPYFLEILDK-RVNKGTGVKSLAEHL  208 (270)
T ss_pred             ccccchhhccccCCceEEEE-eC--CH----HHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCC-CCChHHHHHHHHHHh
Confidence            000     000  0001111 10  11    11122222 22222 23544 466789999999 999999999999999


Q ss_pred             CCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeC--ChhHHHHHHHHHH
Q 040896          216 GFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLR--DPDEVMSFLRRLA  279 (288)
Q Consensus       216 ~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~~~~v~~~l~~~~  279 (288)
                      |++.+   ++++|||+.||++||+.+     |+||+|+||.+  +.+|++++.  +.+||+++|++++
T Consensus       209 gi~~~---~v~afGD~~NDi~Ml~~a-----g~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~  268 (270)
T PRK10513        209 GIKPE---EVMAIGDQENDIAMIEYA-----GVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV  268 (270)
T ss_pred             CCCHH---HEEEECCchhhHHHHHhC-----CceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence            99988   999999999999999999     89999999987  478999986  4779999999876

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=100.00  E-value=1.2e-33  Score=248.58  Aligned_cols=235  Identities=14%  Similarity=0.188  Sum_probs=146.6

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAG   96 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~   96 (288)
                      .|+|++||||||++     +++.++++++++|++|++++ .|++||||++..+.+++   ++. .++||+||+.|+..++
T Consensus         2 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~-~~~I~~NGa~I~~~~~   75 (272)
T PRK15126          2 ARLAAFDMDGTLLM-----PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD-AYLITGNGTRVHSLEG   75 (272)
T ss_pred             ccEEEEeCCCcCcC-----CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC-CcEEecCCcEEEcCCC
Confidence            47999999999998     46689999999999999995 89999999999988875   343 4689999999996444


Q ss_pred             CcccCC-CC--Ccccccc---cCCCceeccCCCccch-hHHHHHHHHHHHHhhccCCeEE-----E-ecCceEEEeccCC
Q 040896           97 SLKQNN-PK--HETRTVD---EQGNEVVHFQPAQEFL-PQIQEMIQVLEEKIKTIKGATV-----E-DNKFCISVHFRRV  163 (288)
Q Consensus        97 ~~~~~~-~~--~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----e-~~~~~~~~~~~~~  163 (288)
                      ...... -.  ...+.++   ..+.....+.....+. ........... . ...+....     . .....+.+ +.  
T Consensus        76 ~~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ki~~-~~--  150 (272)
T PRK15126         76 ELLHRQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHV-Y-SGFRYQLIDLKRLPAHGVTKICF-CG--  150 (272)
T ss_pred             CEEEeecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHH-h-cCCceEEecHHHccccCceEEEE-EC--
Confidence            322100 00  0000000   0000000000000000 00000000000 0 00000000     0 00011111 11  


Q ss_pred             CcccHHHHHHHHHHHHH-hCC-CeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHH
Q 040896          164 DEDDINTLQEMVNSIVE-AYP-NFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKV  240 (288)
Q Consensus       164 ~~~~~~~~~~~l~~~~~-~~~-~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~  240 (288)
                      ++    ...+.+.+.++ .++ .+.+ .++..++||+|+ ++|||+||++|++++|++.+   ++++|||+.||++||+.
T Consensus       151 ~~----~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~-g~sKg~al~~l~~~~gi~~~---~v~afGD~~NDi~Ml~~  222 (272)
T PRK15126        151 DH----DDLTRLQIQLNEALGERAHLCFSATDCLEVLPV-GCNKGAALAVLSQHLGLSLA---DCMAFGDAMNDREMLGS  222 (272)
T ss_pred             CH----HHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecC-CCChHHHHHHHHHHhCCCHH---HeEEecCCHHHHHHHHH
Confidence            11    12223333332 232 3554 456689999999 99999999999999999987   99999999999999999


Q ss_pred             HHhcCCceEEEEecCCCC--ccceE--EeC--ChhHHHHHHHHHH
Q 040896          241 IRHMGRGYPIIVSSVPRE--TKALY--SLR--DPDEVMSFLRRLA  279 (288)
Q Consensus       241 ~~~~~~g~~v~v~na~~~--~~A~~--~~~--~~~~v~~~l~~~~  279 (288)
                      +     |+||+|+||.++  .+|++  ++.  +.+||+++|++++
T Consensus       223 a-----g~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~  262 (272)
T PRK15126        223 V-----GRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWL  262 (272)
T ss_pred             c-----CCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHh
Confidence            9     899999999774  56775  654  5789999999987

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.4e-32  Score=235.00  Aligned_cols=247  Identities=27%  Similarity=0.459  Sum_probs=199.8

Q ss_pred             hHHHHHHhh-cCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC--CEEEEcCCChhhHhhhcCCCCeEEEc
Q 040896            9 TFDRMVAAA-KGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF--PTAIVSGRCLDKVSRFVQLKNVVYAG   85 (288)
Q Consensus         9 ~~~~~~~~~-~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~--~v~i~TGR~~~~l~~~~~~~~~~~i~   85 (288)
                      .+..+..-+ +.+++++|+|+||||+.+..+|....++++++++|++|.++.  .++|+|||+...+..++++++++++|
T Consensus         5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~a   84 (266)
T COG1877           5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIA   84 (266)
T ss_pred             hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEE
Confidence            345555554 778999999999999999999999999999999999999995  49999999999999999999999999


Q ss_pred             cCceeEeCCCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCCc
Q 040896           86 SHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDE  165 (288)
Q Consensus        86 ~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  165 (288)
                      +||+++..+++.+..                   ......+..|++++.+.++.+++++||+++|.+++.+.|||+++++
T Consensus        85 ehGa~~r~~~g~~~~-------------------~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~  145 (266)
T COG1877          85 EHGAEVRDPNGKWWI-------------------NLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAED  145 (266)
T ss_pred             ecceEEecCCCCeeE-------------------ecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCc
Confidence            999999877776421                   1122334568889999999999999999999999999999999876


Q ss_pred             ccHHHHHHHHHHHHHhCCC-eEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhc
Q 040896          166 DDINTLQEMVNSIVEAYPN-FRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHM  244 (288)
Q Consensus       166 ~~~~~~~~~l~~~~~~~~~-~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~  244 (288)
                      +......... ........ +.++.|+..+|+.|. ++|||.+++++++..+....   .+++.||+..|+.||++++.+
T Consensus       146 ~~~~~~a~~~-~~~~~~~~~~~v~~gk~vVEvrp~-~~~KG~a~~~i~~~~~~~~~---~~~~aGDD~TDE~~F~~v~~~  220 (266)
T COG1877         146 DEGAALALAE-AATLINELKLRVTPGKMVVELRPP-GVSKGAAIKYIMDELPFDGR---FPIFAGDDLTDEDAFAAVNKL  220 (266)
T ss_pred             hhhHHHHHHH-HHhccccccEEEEeCceEEEEeeC-CcchHHHHHHHHhcCCCCCC---cceecCCCCccHHHHHhhccC
Confidence            5322111111 11222233 788999999999999 99999999999999988765   899999999999999999876


Q ss_pred             CCceEEEEecCCCCccceEEeCChhHHHHHHHHHHHHh
Q 040896          245 GRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWK  282 (288)
Q Consensus       245 ~~g~~v~v~na~~~~~A~~~~~~~~~v~~~l~~~~~~~  282 (288)
                      + +++|.++-+  .+.|++.+....+..+++.++....
T Consensus       221 ~-~~~v~v~~~--~t~a~~~~~~~~~~~~~l~~~~~~~  255 (266)
T COG1877         221 D-SITVKVGVG--STQAKFRLAGVYGFLRSLYKLLEAL  255 (266)
T ss_pred             C-CceEEecCC--cccccccccccHHHHHHHHHHHHHh
Confidence            5 677777644  6777777777777777777665443

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=100.00  E-value=2.1e-32  Score=270.23  Aligned_cols=247  Identities=24%  Similarity=0.329  Sum_probs=193.4

Q ss_pred             hhHHHHHHhh-cCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc--CCEEEEcCCChhhHhhhcC-CCCeEE
Q 040896            8 DTFDRMVAAA-KGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF--FPTAIVSGRCLDKVSRFVQ-LKNVVY   83 (288)
Q Consensus         8 ~~~~~~~~~~-~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~--~~v~i~TGR~~~~l~~~~~-~~~~~~   83 (288)
                      +..++++.++ .+++++|++||||||++...  ....++++++++|++|.+.  +.|+|+|||++..+.++|+ ++++++
T Consensus       582 l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~--~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~l  659 (854)
T PLN02205        582 LSMEHIVSAYKRTTTRAILLDYDGTLMPQAS--IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGI  659 (854)
T ss_pred             cCHHHHHHHHHhhcCeEEEEecCCcccCCcc--ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEE
Confidence            4668888887 66889999999999997532  1457889999999999766  4899999999999999997 456899


Q ss_pred             EccCceeEeCCCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCC
Q 040896           84 AGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRV  163 (288)
Q Consensus        84 i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  163 (288)
                      +|+||+++..+++.   .|..               .....+ ..|.+.+...+..+.++++|.++|.+..++.|||+.+
T Consensus       660 aaEHG~~ir~~~~~---~w~~---------------~~~~~~-~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~a  720 (854)
T PLN02205        660 AAEHGYFLRLKRDV---EWET---------------CVPVAD-CSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA  720 (854)
T ss_pred             EEeCCEEEEeCCCc---eeee---------------cchhhh-HHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhC
Confidence            99999999876542   1321               111111 1355556666777788899999999999999999988


Q ss_pred             CcccHH----HHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHh---cCCCCCCCceeEEEcCCcccHH
Q 040896          164 DEDDIN----TLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDT---FGFNNASDFLPLYIGDDKTDED  236 (288)
Q Consensus       164 ~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~---~~~~~~~~~~vv~~GDs~ND~~  236 (288)
                      +++...    ++...+++.+...+ +.+.+|+.++||.|+ ++|||.|+++|++.   +|+..+   ++++|||+.||++
T Consensus       721 dpd~~~~qa~el~~~l~~~l~~~~-~~v~~G~~vvEV~p~-gvnKG~Al~~Ll~~~~~~g~~~d---~vl~~GDD~nDed  795 (854)
T PLN02205        721 DPDFGSCQAKELLDHLESVLANEP-VTVKSGQNIVEVKPQ-GVSKGLVAKRLLSIMQERGMLPD---FVLCIGDDRSDED  795 (854)
T ss_pred             ChHHhhhhhHHHHHHHHHHHhcCc-eEEEECCcEEEEEeC-CCCHHHHHHHHHHHHHhcCCCcc---cEEEEcCCccHHH
Confidence            765422    34445555554443 677889999999999 99999999999854   577766   9999999999999


Q ss_pred             HHHHHHhcCC---------ceEEEEecCCCCccceEEeCChhHHHHHHHHHHHHh
Q 040896          237 AFKVIRHMGR---------GYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWK  282 (288)
Q Consensus       237 Ml~~~~~~~~---------g~~v~v~na~~~~~A~~~~~~~~~v~~~l~~~~~~~  282 (288)
                      ||+.++....         +++|.||  ...+.|+|.++++++|.++|+.++...
T Consensus       796 MF~~~~~~~~g~~~~~~~~~~~v~VG--~~~S~A~y~L~d~~eV~~lL~~L~~~~  848 (854)
T PLN02205        796 MFEVITSSMAGPSIAPRAEVFACTVG--QKPSKAKYYLDDTAEIVRLMQGLASVS  848 (854)
T ss_pred             HHHHhhhhccCCcccccccceeEEEC--CCCccCeEecCCHHHHHHHHHHHHhcc
Confidence            9999974211         3788888  347899999999999999999998643

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=100.00  E-value=1.7e-33  Score=242.37  Aligned_cols=224  Identities=40%  Similarity=0.641  Sum_probs=147.3

Q ss_pred             EEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC--CEEEEcCCChhhHhhhcCCCCeEEEccCceeEeCCCCCcccCC
Q 040896           25 FLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF--PTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQNN  102 (288)
Q Consensus        25 ~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~--~v~i~TGR~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~  102 (288)
                      |+|+||||.++..+|....++++++++|++|.+.+  .|+|+|||++..+..+.++++++++|+||+++..+++...   
T Consensus         1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~---   77 (235)
T PF02358_consen    1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEW---   77 (235)
T ss_dssp             EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EE---
T ss_pred             CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccc---
Confidence            79999999999888888899999999999999995  6999999999997777889999999999999998776421   


Q ss_pred             CCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCCcc----cHHHHHHHHHHH
Q 040896          103 PKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDED----DINTLQEMVNSI  178 (288)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~----~~~~~~~~l~~~  178 (288)
                      .                .........|++.+.+.++.+.++++|+++|++.++++|||+++++.    ...++.+.+.+.
T Consensus        78 ~----------------~~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~  141 (235)
T PF02358_consen   78 T----------------NLPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREI  141 (235)
T ss_dssp             E-----------------TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHH
T ss_pred             c----------------ccccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHH
Confidence            1                11122234688888888888888899999999999999999998876    234566677777


Q ss_pred             HHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhc-CCceEEEEecCC-
Q 040896          179 VEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHM-GRGYPIIVSSVP-  256 (288)
Q Consensus       179 ~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~-~~g~~v~v~na~-  256 (288)
                      +...+++.+..|+.++||.|+ +++||.|+++|++.++......+.++++||+..|++||++++.. ..|+++.|+... 
T Consensus       142 ~~~~~~~~v~~g~~~vEvrp~-~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~  220 (235)
T PF02358_consen  142 LASHPGLEVVPGKKVVEVRPP-GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSV  220 (235)
T ss_dssp             HHHH-T-EEEE-SSEEEEE-T-T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----
T ss_pred             HHhCCCEEEEECCCEEEEEeC-CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecc
Confidence            766667999999999999999 99999999999999987522223999999999999999999875 127899998875 


Q ss_pred             --CCccceEEeCCh
Q 040896          257 --RETKALYSLRDP  268 (288)
Q Consensus       257 --~~~~A~~~~~~~  268 (288)
                        ..+.|+|.++++
T Consensus       221 ~~~~t~A~y~l~~p  234 (235)
T PF02358_consen  221 GEKPTAASYRLDDP  234 (235)
T ss_dssp             --------------
T ss_pred             cccccccccccccC
Confidence              358999998875

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=100.00  E-value=1.8e-32  Score=235.02  Aligned_cols=214  Identities=17%  Similarity=0.200  Sum_probs=146.5

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCC-
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPA-   95 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~-   95 (288)
                      .|+|++||||||++     +++.+++.++++|++|++.+ +|++||||++..+.+++   +++ .++|++||+.|+... 
T Consensus         3 ~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~-~~~i~~nGa~i~~~~~   76 (230)
T PRK01158          3 IKAIAIDIDGTITD-----KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS-GPVIAENGGVISVGFD   76 (230)
T ss_pred             eeEEEEecCCCcCC-----CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC-CcEEEecCeEEEEcCC
Confidence            58999999999998     46679999999999999885 99999999999988764   443 579999999998752 


Q ss_pred             CCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEe-cCceE--EEeccCCCcccHHHHH
Q 040896           96 GSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVED-NKFCI--SVHFRRVDEDDINTLQ  172 (288)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~~~~~--~~~~~~~~~~~~~~~~  172 (288)
                      +....                   ..+..    ....+.+.+..........+... .....  ......   .    ..
T Consensus        77 ~~~~~-------------------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~  126 (230)
T PRK01158         77 GKRIF-------------------LGDIE----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRT---V----PV  126 (230)
T ss_pred             CCEEE-------------------EcchH----HHHHHHHHHHHhccccceeeecCCcccccceeeeccc---c----cH
Confidence            22110                   00101    11122222211110000000000 00000  000111   1    01


Q ss_pred             HHHHHHHHhCC-CeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEE
Q 040896          173 EMVNSIVEAYP-NFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPII  251 (288)
Q Consensus       173 ~~l~~~~~~~~-~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~  251 (288)
                      +.+.+.++.+. .+.+..+..++||.|+ ++|||.|+++++++++++.+   ++++|||+.||++||+.+     |++++
T Consensus       127 ~~~~~~l~~~~~~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~~~i~~~---~~i~~GD~~NDi~m~~~a-----g~~va  197 (230)
T PRK01158        127 EEVRELLEELGLDLEIVDSGFAIHIKSP-GVNKGTGLKKLAELMGIDPE---EVAAIGDSENDLEMFEVA-----GFGVA  197 (230)
T ss_pred             HHHHHHHHHcCCcEEEEecceEEEEeeC-CCChHHHHHHHHHHhCCCHH---HEEEECCchhhHHHHHhc-----CceEE
Confidence            23334444442 3455555578999999 99999999999999999877   999999999999999999     89999


Q ss_pred             EecCCC--CccceEEeC--ChhHHHHHHHHHH
Q 040896          252 VSSVPR--ETKALYSLR--DPDEVMSFLRRLA  279 (288)
Q Consensus       252 v~na~~--~~~A~~~~~--~~~~v~~~l~~~~  279 (288)
                      |+||.+  +..|++++.  +.+||+++|++++
T Consensus       198 m~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~~  229 (230)
T PRK01158        198 VANADEELKEAADYVTEKSYGEGVAEAIEHLL  229 (230)
T ss_pred             ecCccHHHHHhcceEecCCCcChHHHHHHHHh
Confidence            999986  468999986  4779999998875

>PLN02887 hydrolase family protein

Probab=100.00  E-value=1.3e-31  Score=254.29  Aligned_cols=242  Identities=19%  Similarity=0.184  Sum_probs=147.7

Q ss_pred             cCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCC--------eEEEc
Q 040896           18 KGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKN--------VVYAG   85 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~--------~~~i~   85 (288)
                      .-+.|+||+||||||++     +++.+++.++++|+++++++ .|+|||||++..+.+++   ++..        .++|+
T Consensus       305 ~~~iKLIa~DLDGTLLn-----~d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~  379 (580)
T PLN02887        305 KPKFSYIFCDMDGTLLN-----SKSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVF  379 (580)
T ss_pred             ccCccEEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEe
Confidence            34679999999999998     56789999999999999995 99999999999988764   3321        25778


Q ss_pred             cCceeEeCCCCCccc-CCCC-C-cccccc---cCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEE-------E-e
Q 040896           86 SHGMDISTPAGSLKQ-NNPK-H-ETRTVD---EQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATV-------E-D  151 (288)
Q Consensus        86 ~nGa~i~~~~~~~~~-~~~~-~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------e-~  151 (288)
                      +||+.|+..++.... ..-. . ..+.+.   ..+.....+....-|......................+       . .
T Consensus       380 ~NGA~I~d~~g~~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~  459 (580)
T PLN02887        380 LQGLLVYGRQGREIYRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAA  459 (580)
T ss_pred             ecCeEEEECCCcEEEEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhccc
Confidence            899999864443221 0000 0 000000   00000000000000000000000000000000000000       0 0


Q ss_pred             cCceEEEeccCCCcccHHHHHHHHHHHH-HhCC-CeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEE
Q 040896          152 NKFCISVHFRRVDEDDINTLQEMVNSIV-EAYP-NFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYI  228 (288)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~-~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~  228 (288)
                      ....+.+ +.  .+   ....+.+.+.+ +.+. .+.+ .++..++||+|+ |+|||.||++|++++|++.+   +|++|
T Consensus       460 ~i~Ki~~-~~--~~---e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~-gvSKG~ALk~L~e~lGI~~e---eviAF  529 (580)
T PLN02887        460 DIQKVIF-LD--TA---EGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPP-GTSKGNGVKMLLNHLGVSPD---EIMAI  529 (580)
T ss_pred             CeeEEEE-Ec--Ch---HHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecC-CCCHHHHHHHHHHHcCCCHH---HEEEE
Confidence            0001111 11  11   11112222222 2222 3554 456789999999 99999999999999999988   99999


Q ss_pred             cCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeC--ChhHHHHHHHHHH
Q 040896          229 GDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLR--DPDEVMSFLRRLA  279 (288)
Q Consensus       229 GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~~~~v~~~l~~~~  279 (288)
                      ||+.||++||+++     |+||||+||.+  +.+|++|+.  +.+||+++|++++
T Consensus       530 GDs~NDIeMLe~A-----G~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~  579 (580)
T PLN02887        530 GDGENDIEMLQLA-----SLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA  579 (580)
T ss_pred             ecchhhHHHHHHC-----CCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence            9999999999999     89999999977  478999986  4789999999874

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.97  E-value=5.4e-30  Score=252.91  Aligned_cols=253  Identities=15%  Similarity=0.173  Sum_probs=194.4

Q ss_pred             hhHHHHHHhh-cCCcEEEEEecCCccccCcC---CCCCCCCCHHHHHHHHHHhhc--CCEEEEcCCChhhHhhhcCCCCe
Q 040896            8 DTFDRMVAAA-KGKKIVVFLDYDGTLSPIVE---DPDKAFMSDTMRMAVHEVAHF--FPTAIVSGRCLDKVSRFVQLKNV   81 (288)
Q Consensus         8 ~~~~~~~~~~-~~~~~li~~DlDGTL~~~~~---~~~~~~i~~~~~~aL~~L~~~--~~v~i~TGR~~~~l~~~~~~~~~   81 (288)
                      ++.+.+..++ .+++++||+|+||||++...   +|....++++++++|++|.+.  +.|+|+|||+...+.++++.+++
T Consensus       493 l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l  572 (797)
T PLN03063        493 LPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNI  572 (797)
T ss_pred             CCHHHHHHHHHhccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCC
Confidence            4678888887 56789999999999998644   235567899999999999988  48999999999999999987678


Q ss_pred             EEEccCceeEeCCCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEecc
Q 040896           82 VYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFR  161 (288)
Q Consensus        82 ~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  161 (288)
                      +++|+||+++..+++.    |...              .....+ ..|.+.+.+.++.+.+++||+++|.+.+++.|||+
T Consensus       573 ~l~aeHG~~~r~~~~~----w~~~--------------~~~~~~-~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR  633 (797)
T PLN03063        573 WLAAENGMFLRHTSGE----WVTT--------------MPEHMN-LDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYE  633 (797)
T ss_pred             cEEEeCCEEEecCCCc----eeec--------------cccccC-hhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcC
Confidence            9999999998765543    3210              001001 25777788888888899999999999999999999


Q ss_pred             CCCcccHHHHH-HHHHHHHHh---CCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCC---CCCCCceeEEEcCCc-c
Q 040896          162 RVDEDDINTLQ-EMVNSIVEA---YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGF---NNASDFLPLYIGDDK-T  233 (288)
Q Consensus       162 ~~~~~~~~~~~-~~l~~~~~~---~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~---~~~~~~~vv~~GDs~-N  233 (288)
                      +++++...... +.+..+.+.   .+++.+..|+..+||.|. ++|||.|++.|++.+..   .....+.++|+||+. .
T Consensus       634 ~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~-gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~  712 (797)
T PLN03063        634 YADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAI-GVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEK  712 (797)
T ss_pred             CCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcC-CCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCC
Confidence            98765422222 222222222   235889999999999999 99999999999998621   111124999999985 4


Q ss_pred             cHHHHHHHHhcC----------------------------CceEEEEecCCCCccceEEeCChhHHHHHHHHHHHHh
Q 040896          234 DEDAFKVIRHMG----------------------------RGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLARWK  282 (288)
Q Consensus       234 D~~Ml~~~~~~~----------------------------~g~~v~v~na~~~~~A~~~~~~~~~v~~~l~~~~~~~  282 (288)
                      |++||++++...                            +-|+|.||.  ..++|+|+++++++|.++|+.++..+
T Consensus       713 DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~--~~s~A~y~l~~~~eV~~lL~~l~~~~  787 (797)
T PLN03063        713 DEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQ--ARTKARYVLDSSNDVVSLLHKLAVAN  787 (797)
T ss_pred             cHHHHHhccccccccccccccccccccccccccccccccCceEEEEECC--CCccCeecCCCHHHHHHHHHHHhccC
Confidence            999999886311                            016677874  47899999999999999999998654

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=99.97  E-value=1.8e-30  Score=228.10  Aligned_cols=239  Identities=14%  Similarity=0.133  Sum_probs=144.9

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCC-C
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTP-A   95 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~-~   95 (288)
                      .|+||+||||||++     +++.++++++++|+++++++ .|+|||||++..+.+++   ++. .++||+||+.|+.. +
T Consensus         3 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~-~~~I~~NGa~i~d~~~   76 (272)
T PRK10530          3 YRVIALDLDGTLLT-----PKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD-TPAICCNGTYLYDYQA   76 (272)
T ss_pred             ccEEEEeCCCceEC-----CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC-CCEEEcCCcEEEecCC
Confidence            58999999999998     46679999999999999995 99999999999988875   332 46999999999964 3


Q ss_pred             CCcccC-CCCC--cccccc---cCCCceeccCCCccch-hHHHHHHHHHHHHhhccCC----eEEEe---------cCce
Q 040896           96 GSLKQN-NPKH--ETRTVD---EQGNEVVHFQPAQEFL-PQIQEMIQVLEEKIKTIKG----ATVED---------NKFC  155 (288)
Q Consensus        96 ~~~~~~-~~~~--~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~e~---------~~~~  155 (288)
                      +..... +-..  ..+.++   ..+..........-+. ......... ..+....+.    .+...         ....
T Consensus        77 ~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
T PRK10530         77 KKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRT-LNWAQTLPPEQRPTFTQVDSLAQAARQVNAI  155 (272)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHH-hhhhhccchhcccceEEcccHHHHHhhcCCc
Confidence            332211 0000  000000   0000000000000000 000000000 000000000    00000         0000


Q ss_pred             EEEeccCCCcccHHHHHHHHHHHHHhCCCeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCccc
Q 040896          156 ISVHFRRVDEDDINTLQEMVNSIVEAYPNFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTD  234 (288)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND  234 (288)
                      ..+.....+.   ....+..+.+.+.+ ++.+ .++..++||+|+ ++|||.|++++++++|++.+   ++++|||+.||
T Consensus       156 ~~i~~~~~~~---~~~~~~~~~~~~~~-~~~~~~s~~~~~ei~~~-~~~K~~~l~~l~~~~gi~~~---e~i~~GD~~ND  227 (272)
T PRK10530        156 WKFALTHEDL---PQLQHFAKHVEHEL-GLECEWSWHDQVDIARK-GNSKGKRLTQWVEAQGWSMK---NVVAFGDNFND  227 (272)
T ss_pred             EEEEEecCCH---HHHHHHHHHHhhhc-CceEEEecCceEEEecC-CCChHHHHHHHHHHcCCCHH---HeEEeCCChhh
Confidence            0010100010   11111222233333 3433 345578999999 99999999999999999987   99999999999


Q ss_pred             HHHHHHHHhcCCceEEEEecCCCC--ccceEEeC--ChhHHHHHHHHHH
Q 040896          235 EDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLR--DPDEVMSFLRRLA  279 (288)
Q Consensus       235 ~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~--~~~~v~~~l~~~~  279 (288)
                      ++||+.+     |++|+|+|+.+.  ..|++++.  +.+||+++|++++
T Consensus       228 i~m~~~a-----g~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~  271 (272)
T PRK10530        228 ISMLEAA-----GLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV  271 (272)
T ss_pred             HHHHHhc-----CceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence            9999999     899999999653  68999986  4779999999875

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=99.97  E-value=9.3e-31  Score=225.92  Aligned_cols=210  Identities=23%  Similarity=0.366  Sum_probs=141.7

Q ss_pred             EEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcC-CC-CeEEEccCceeEeCCCCCccc
Q 040896           24 VFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ-LK-NVVYAGSHGMDISTPAGSLKQ  100 (288)
Q Consensus        24 i~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~-~~-~~~~i~~nGa~i~~~~~~~~~  100 (288)
                      ||+||||||++     +++.++++++++|++|++++ .|++||||++..+.+++. ++ ..++|++||+.+....+....
T Consensus         1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~   75 (254)
T PF08282_consen    1 IFSDLDGTLLN-----SDGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILY   75 (254)
T ss_dssp             EEEECCTTTCS-----TTSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEE
T ss_pred             cEEEECCceec-----CCCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccch
Confidence            79999999999     56779999999999999885 899999999999999864 22 268999999999444444321


Q ss_pred             CCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHh-----hccCCeEEEec-----------------------
Q 040896          101 NNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKI-----KTIKGATVEDN-----------------------  152 (288)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~e~~-----------------------  152 (288)
                      .+                  ....   .....+.+.+....     ......+....                       
T Consensus        76 ~~------------------~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (254)
T PF08282_consen   76 EK------------------PIDS---DDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSED  134 (254)
T ss_dssp             EE------------------SB-H---HHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHH
T ss_pred             hh------------------heec---cchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccc
Confidence            00                  0000   12222222222110     00000000000                       


Q ss_pred             ------CceEEEeccCCCcccHHHHHHHHHH-HHHhCCC-eE-EeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCc
Q 040896          153 ------KFCISVHFRRVDEDDINTLQEMVNS-IVEAYPN-FR-ISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDF  223 (288)
Q Consensus       153 ------~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~-~~-~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~  223 (288)
                            ...+.+.   .+.    +..+.+.+ +-+.+++ .. +.++..++||+|+ ++|||+|+++|++++|++.+   
T Consensus       135 ~~~~~~i~ki~~~---~~~----~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~-~vsK~~ai~~l~~~~~i~~~---  203 (254)
T PF08282_consen  135 DLEDEEIFKILFF---PDP----EDLEQLREELKKKFPNLIDVVRSSPYFLEITPK-GVSKGSAIKYLLEYLGISPE---  203 (254)
T ss_dssp             HHHCSSESEEEEE---SCH----HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEET-TSSHHHHHHHHHHHHTTSGG---
T ss_pred             ccccccceeeecc---ccc----hhhhhhhhhhccccCcceeEEEecccceEEeeC-CCCHHHHHHHHhhhcccccc---
Confidence                  0111111   011    22222322 2233333 23 4567899999999 99999999999999999987   


Q ss_pred             eeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHH
Q 040896          224 LPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFL  275 (288)
Q Consensus       224 ~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l  275 (288)
                      ++++||||.||++||+.+     |+||+|+||.+.  .+|++++++  .+||+++|
T Consensus       204 ~~~~~GD~~ND~~Ml~~~-----~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i  254 (254)
T PF08282_consen  204 DIIAFGDSENDIEMLELA-----GYSVAMGNATPELKKAADYITPSNNDDGVAKAI  254 (254)
T ss_dssp             GEEEEESSGGGHHHHHHS-----SEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred             eeEEeecccccHhHHhhc-----CeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence            999999999999999999     899999999874  799999874  46888875

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=99.97  E-value=7.1e-31  Score=223.11  Aligned_cols=208  Identities=18%  Similarity=0.237  Sum_probs=141.2

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcC-CC-CeEEEccCceeEeCCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ-LK-NVVYAGSHGMDISTPAGS   97 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~-~~-~~~~i~~nGa~i~~~~~~   97 (288)
                      .|+|++||||||++     +++.+++.++++|++|++.+ .|++||||++..+.+++. ++ ..++|++||++|+..++.
T Consensus         1 ik~v~~DlDGTLl~-----~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~   75 (215)
T TIGR01487         1 IKLVAIDIDGTLTE-----PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKED   75 (215)
T ss_pred             CcEEEEecCCCcCC-----CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCc
Confidence            37999999999998     56689999999999999995 999999999999888753 22 247999999999986432


Q ss_pred             cccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCCcccHHHHHHHHHH
Q 040896           98 LKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNS  177 (288)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~  177 (288)
                      ..  +.                 .....+.  ........  +.........  ......+..   ....    .+.+.+
T Consensus        76 ~~--~~-----------------~~~~~~~--~~~~~~~~--~~~~~~~~~~--~~~~~~~~~---~~~~----~~~~~~  123 (215)
T TIGR01487        76 IF--LA-----------------NMEEEWF--LDEEKKKR--FPRDRLSNEY--PRASLVIMR---EGKD----VDEVRE  123 (215)
T ss_pred             EE--Ee-----------------cccchhh--HHHhhhhh--hhhhhccccc--ceeEEEEec---CCcc----HHHHHH
Confidence            11  00                 0000000  00000000  0000000000  001111111   1111    123334


Q ss_pred             HHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC
Q 040896          178 IVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR  257 (288)
Q Consensus       178 ~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~  257 (288)
                      .++.. ++.+..+..++||+|+ +++||.|+++++++++++.+   ++++||||.||++||+.+     |++++|+|+.+
T Consensus       124 ~l~~~-~~~~~~~~~~~ei~~~-~~~K~~~i~~l~~~~~i~~~---~~i~iGDs~ND~~ml~~a-----g~~vam~na~~  193 (215)
T TIGR01487       124 IIKER-GLNLVDSGFAIHIMKK-GVDKGVGVEKLKELLGIKPE---EVAAIGDSENDIDLFRVV-----GFKVAVANADD  193 (215)
T ss_pred             HHHhC-CeEEEecCceEEEecC-CCChHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHhC-----CCeEEcCCccH
Confidence            44443 4665555678999999 99999999999999999977   999999999999999999     89999999977


Q ss_pred             C--ccceEEeC--ChhHHHHHH
Q 040896          258 E--TKALYSLR--DPDEVMSFL  275 (288)
Q Consensus       258 ~--~~A~~~~~--~~~~v~~~l  275 (288)
                      +  .+|+|++.  +.+||+++|
T Consensus       194 ~~k~~A~~v~~~~~~~Gv~~~l  215 (215)
T TIGR01487       194 QLKEIADYVTSNPYGEGVVEVL  215 (215)
T ss_pred             HHHHhCCEEcCCCCCchhhhhC
Confidence            4  68999986  467888764

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=99.97  E-value=7.8e-31  Score=224.11  Aligned_cols=211  Identities=18%  Similarity=0.227  Sum_probs=139.6

Q ss_pred             EEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCCCcc
Q 040896           24 VFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAGSLK   99 (288)
Q Consensus        24 i~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~~~~   99 (288)
                      |+|||||||++     +++.+++.++++|++|++.+ .|++||||++..+.+++   ++ ..++|++||+.|+..++...
T Consensus         1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~-~~~~i~~nGa~i~~~~~~~~   74 (225)
T TIGR01482         1 IASDIDGTLTD-----PNRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGT-PDPVIAENGGEISYNEGMDD   74 (225)
T ss_pred             CeEeccCccCC-----CCcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC-CCeEEEecCcEEEeCCCCce
Confidence            68999999998     45679999999999999995 99999999999888764   43 36799999999987643211


Q ss_pred             cCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCCcccHHHHHHHHHHHH
Q 040896          100 QNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIV  179 (288)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  179 (288)
                       .|..                ....   .+.................... .........+. .+.       +.+.+++
T Consensus        75 -~~~~----------------~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~-------~~~~~~~  125 (225)
T TIGR01482        75 -IFLA----------------YLEE---EWFLDIVIAKTFPFSRLKVQYP-RRASLVKMRYG-IDV-------DTVREII  125 (225)
T ss_pred             -EEec----------------ccCH---HHHHHHHHhcccchhhhccccc-cccceEEEeec-CCH-------HHHHHHH
Confidence             1110                0111   1111110000000000000000 00000011111 111       1223333


Q ss_pred             HhCC-CeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC
Q 040896          180 EAYP-NFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE  258 (288)
Q Consensus       180 ~~~~-~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~  258 (288)
                      +.+. .+.+.++..++||+|+ ++|||.|+++++++++++.+   ++++|||+.||++||+.+     |++|+|+||.++
T Consensus       126 ~~~~~~~~~~~~~~~~ei~~~-~~~K~~~i~~l~~~~~i~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~Na~~~  196 (225)
T TIGR01482       126 KELGLNLVAVDSGFDIHILPQ-GVNKGVAVKKLKEKLGIKPG---ETLVCGDSENDIDLFEVP-----GFGVAVANAQPE  196 (225)
T ss_pred             HhcCceEEEecCCcEEEEeeC-CCCHHHHHHHHHHHhCCCHH---HEEEECCCHhhHHHHHhc-----CceEEcCChhHH
Confidence            4332 1333355679999999 99999999999999999987   999999999999999999     899999999774


Q ss_pred             --ccceEEeC--ChhH----HHHHHHHH
Q 040896          259 --TKALYSLR--DPDE----VMSFLRRL  278 (288)
Q Consensus       259 --~~A~~~~~--~~~~----v~~~l~~~  278 (288)
                        .+|++|+.  +.+|    |+++|+++
T Consensus       197 ~k~~A~~vt~~~~~~G~~~~v~~~l~~~  224 (225)
T TIGR01482       197 LKEWADYVTESPYGEGGAEAIGEILQAI  224 (225)
T ss_pred             HHHhcCeecCCCCCCcHHHHHHHHHHhh
Confidence              68999986  4668    77777664

catalyze the same reaction as SPP.

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.97  E-value=1.8e-28  Score=241.69  Aligned_cols=217  Identities=13%  Similarity=0.172  Sum_probs=168.5

Q ss_pred             hhhHHHHHHhh-cCCcEEEEEecCCccccCcCCCC---------CCCCCHHHHHHHHHHhhc--CCEEEEcCCChhhHhh
Q 040896            7 LDTFDRMVAAA-KGKKIVVFLDYDGTLSPIVEDPD---------KAFMSDTMRMAVHEVAHF--FPTAIVSGRCLDKVSR   74 (288)
Q Consensus         7 ~~~~~~~~~~~-~~~~~li~~DlDGTL~~~~~~~~---------~~~i~~~~~~aL~~L~~~--~~v~i~TGR~~~~l~~   74 (288)
                      .++.+.++..+ .+++++||+|+||||++...+|.         ...++++++++|++|.+.  +.|+|+|||+...+..
T Consensus       576 ~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~  655 (934)
T PLN03064        576 QLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDE  655 (934)
T ss_pred             CCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHH
Confidence            35778888887 66889999999999999766665         556889999999999998  4899999999999999


Q ss_pred             hcCCCCeEEEccCceeEeCCCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCc
Q 040896           75 FVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKF  154 (288)
Q Consensus        75 ~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~  154 (288)
                      +++..+++++|+||+++..+++.    |...              .....+ ..|.+.+...++.+.+++||+++|.+.+
T Consensus       656 ~fg~~~L~LaAEHG~~~R~~~~~----w~~~--------------~~~~~~-~~W~~~v~~ile~~~eRtPGS~IE~K~~  716 (934)
T PLN03064        656 NFGEFDMWLAAENGMFLRHTKGE----WMTT--------------MPEHLN-MDWVDSVKHVFEYFTERTPRSHFETRET  716 (934)
T ss_pred             HhCCCCceEEeeCCeEEecCCCc----ceec--------------cccccc-hHHHHHHHHHHHHHHhcCCCcEEEEcCc
Confidence            99866799999999998876554    3210              001101 2578888888888899999999999999


Q ss_pred             eEEEeccCCCcccHHHHHHHHHHHH-Hh---CCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCC---CCCceeEE
Q 040896          155 CISVHFRRVDEDDINTLQEMVNSIV-EA---YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNN---ASDFLPLY  227 (288)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~---~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~---~~~~~vv~  227 (288)
                      ++.|||+.++++....+...+...+ ..   .+++.+..|+..+||.|. ++|||.|++.|++++.-+.   ...|.|+|
T Consensus       717 SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~-gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc  795 (934)
T PLN03064        717 SLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPV-GVTKGAAIDRILGEIVHSKSMTTPIDYVLC  795 (934)
T ss_pred             EEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcC-CCCHHHHHHHHHHhhhhccccCCCCCEEEE
Confidence            9999999987664332222222222 21   235888999999999999 9999999999999763111   11349999


Q ss_pred             EcCCcc-cHHHHHHHHh
Q 040896          228 IGDDKT-DEDAFKVIRH  243 (288)
Q Consensus       228 ~GDs~N-D~~Ml~~~~~  243 (288)
                      +||+.. |++||+++..
T Consensus       796 ~GDd~~~DEdmF~~l~~  812 (934)
T PLN03064        796 IGHFLGKDEDIYTFFEP  812 (934)
T ss_pred             eCCCCCCcHHHHHHHhc
Confidence            999875 9999999853

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=99.97  E-value=3.8e-29  Score=218.06  Aligned_cols=217  Identities=15%  Similarity=0.236  Sum_probs=140.5

Q ss_pred             EEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCCCc
Q 040896           23 VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAGSL   98 (288)
Q Consensus        23 li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~~~   98 (288)
                      +|++||||||++.     +..+.+.++++|++|++.+ .|++||||++..+.+++   +++ .++||+||++|+..++..
T Consensus         1 li~~DlDGTll~~-----~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~-~~~I~~NGa~i~~~~~~~   74 (256)
T TIGR01486         1 WIFTDLDGTLLDP-----HGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE-DPFIVENGGAIYGPRGWF   74 (256)
T ss_pred             CEEEcCCCCCcCC-----CCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC-CcEEEcCCeEEEeCCCcc
Confidence            5899999999983     3424446999999999985 99999999999988875   443 579999999999865432


Q ss_pred             ccC--CCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhh-cc--------------CCeE------EEecCce
Q 040896           99 KQN--NPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIK-TI--------------KGAT------VEDNKFC  155 (288)
Q Consensus        99 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~------~e~~~~~  155 (288)
                      ...  |.  ..            .....   ..+..+.+.+..... ..              .+..      .......
T Consensus        75 ~~~~~~~--~~------------~~i~~---~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (256)
T TIGR01486        75 TEPEYPV--IA------------LGIPY---EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYS  137 (256)
T ss_pred             cCCCeEE--EE------------cCCCH---HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccC
Confidence            100  00  00            00000   111112211110000 00              0000      0000000


Q ss_pred             EEEeccCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCC--CCCCceeEEEcCCcc
Q 040896          156 ISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFN--NASDFLPLYIGDDKT  233 (288)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~--~~~~~~vv~~GDs~N  233 (288)
                      ..+..   +    .+..+.+.+.++.. ++.+..+..++||+|+ +++||.|+++|+++++++  .+   ++++||||.|
T Consensus       138 ~~~~~---~----~~~~~~~~~~~~~~-~~~~~~s~~~~ei~~~-~~~Kg~ai~~l~~~~~i~~~~~---~~~a~GD~~N  205 (256)
T TIGR01486       138 ETILW---S----EERRERFTEALVEL-GLEVTHGNRFYHVLGA-GSDKGKAANALKQFYNQPGGAI---KVVGLGDSPN  205 (256)
T ss_pred             Cceec---C----hHHHHHHHHHHHHc-CCEEEeCCceEEEecC-CCCHHHHHHHHHHHHhhcCCCc---eEEEEcCCHh
Confidence            01111   1    12233444444443 4665555579999999 999999999999999998  76   9999999999


Q ss_pred             cHHHHHHHHhcCCceEEEEecCCC-----Ccc--c-eEEeC--ChhHHHHHHHHHH
Q 040896          234 DEDAFKVIRHMGRGYPIIVSSVPR-----ETK--A-LYSLR--DPDEVMSFLRRLA  279 (288)
Q Consensus       234 D~~Ml~~~~~~~~g~~v~v~na~~-----~~~--A-~~~~~--~~~~v~~~l~~~~  279 (288)
                      |++||+.+     |++|+|+||.+     +..  | ++++.  +.+||++.|++++
T Consensus       206 D~~Ml~~a-----g~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~~  256 (256)
T TIGR01486       206 DLPLLEVV-----DLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHLL  256 (256)
T ss_pred             hHHHHHHC-----CEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHhC
Confidence            99999999     89999999973     234  4 48875  4789999998874

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=99.97  E-value=9.8e-30  Score=220.86  Aligned_cols=227  Identities=15%  Similarity=0.213  Sum_probs=151.1

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh---cCCC-CeEEEccCceeEeCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF---VQLK-NVVYAGSHGMDISTPA   95 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~---~~~~-~~~~i~~nGa~i~~~~   95 (288)
                      +.+|++||||||+++..  .+..++++++++++++++++ .|++||||++..+.++   ++.+ +..+|++||+.|+.++
T Consensus         1 ~~li~tDlDGTLl~~~~--~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~   78 (249)
T TIGR01485         1 RLLLVSDLDNTLVDHTD--GDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGG   78 (249)
T ss_pred             CeEEEEcCCCcCcCCCC--CChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCC
Confidence            46899999999998542  34678999999999999986 9999999999999987   3432 2358999999998754


Q ss_pred             CCcc-cCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCCcccHHHHHHH
Q 040896           96 GSLK-QNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEM  174 (288)
Q Consensus        96 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  174 (288)
                      .... ..|..               . ....+.  ...+......+....+......+.+.+.+....   .......+.
T Consensus        79 ~~~~~~~~~~---------------~-~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~---~~~~~~~~~  137 (249)
T TIGR01485        79 AEVPDQHWAE---------------Y-LSEKWQ--RDIVVAITDKFEELKPQPDLEQRPHKVSFFLDP---EAAPEVIKQ  137 (249)
T ss_pred             CCcCCHHHHH---------------H-HhcccC--HHHHHHHHhcCcccccCCccccCCeeEEEEech---hhhhHHHHH
Confidence            2211 11110               0 000111  111222211111111222223334455554321   112233455


Q ss_pred             HHHHHHhCC-CeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEE
Q 040896          175 VNSIVEAYP-NFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV  252 (288)
Q Consensus       175 l~~~~~~~~-~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v  252 (288)
                      +.+.+.... .+.+ .++..++||+|+ ++|||.|+++|+++++++.+   ++++|||+.||++||+.+.    +++|+|
T Consensus       138 l~~~l~~~~~~~~~~~~~~~~ldi~~~-~~~K~~al~~l~~~~~i~~~---~~i~~GD~~ND~~ml~~~~----~~~va~  209 (249)
T TIGR01485       138 LTEMLKETGLDVKLIYSSGKDLDILPQ-GSGKGQALQYLLQKLAMEPS---QTLVCGDSGNDIELFEIGS----VRGVIV  209 (249)
T ss_pred             HHHHHHhcCCCEEEEEECCceEEEEeC-CCChHHHHHHHHHHcCCCcc---CEEEEECChhHHHHHHccC----CcEEEE
Confidence            565555442 2443 567789999999 99999999999999999887   9999999999999999842    689999


Q ss_pred             ecCCCC--ccc-------eEEeC--ChhHHHHHHHHH
Q 040896          253 SSVPRE--TKA-------LYSLR--DPDEVMSFLRRL  278 (288)
Q Consensus       253 ~na~~~--~~A-------~~~~~--~~~~v~~~l~~~  278 (288)
                      +||.++  ..+       .|++.  .++|+++.|+++
T Consensus       210 ~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~  246 (249)
T TIGR01485       210 SNAQEELLQWYDENAKDKIYHASERCAGGIIEAIAHF  246 (249)
T ss_pred             CCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence            999764  222       26665  478999999875

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=99.97  E-value=2.1e-29  Score=219.67  Aligned_cols=212  Identities=21%  Similarity=0.308  Sum_probs=140.0

Q ss_pred             EEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcC-CC-CeEEEccCceeEeCCCCCcc
Q 040896           23 VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ-LK-NVVYAGSHGMDISTPAGSLK   99 (288)
Q Consensus        23 li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~-~~-~~~~i~~nGa~i~~~~~~~~   99 (288)
                      +|++||||||++     .++.++++++++|++|++++ .|++||||++..+.+++. +. ..++|++||+.|+..++...
T Consensus         1 li~~DlDGTLl~-----~~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i   75 (256)
T TIGR00099         1 LIFIDLDGTLLN-----DDHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEIL   75 (256)
T ss_pred             CEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEE
Confidence            589999999998     45679999999999999995 999999999999888753 22 24799999999997644322


Q ss_pred             cCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHh---------------------------hccCCeEEE--
Q 040896          100 QNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKI---------------------------KTIKGATVE--  150 (288)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~e--  150 (288)
                      ..  ..                ...   ..+..+.+.+....                           ...+.....  
T Consensus        76 ~~--~~----------------i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (256)
T TIGR00099        76 YK--KP----------------LDL---DLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDI  134 (256)
T ss_pred             ee--cC----------------CCH---HHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccc
Confidence            10  00                000   01111111111100                           000000000  


Q ss_pred             ----ecCceEEEeccCCCcccHHHHHHHHHHHHH--hC-CCeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCC
Q 040896          151 ----DNKFCISVHFRRVDEDDINTLQEMVNSIVE--AY-PNFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASD  222 (288)
Q Consensus       151 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~-~~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~  222 (288)
                          .........+.  +.    ...+.+.+.+.  .+ ..+.+ .++..++||+|+ ++|||.|+++++++++++.+  
T Consensus       135 ~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~-~~~K~~~i~~~~~~~~~~~~--  205 (256)
T TIGR00099       135 QYLPDDILKILLLFL--DP----EDLDLLIEALNKLELEENVSVVSSGPYSIEITAK-GVSKGSALQSLAEALGISLE--  205 (256)
T ss_pred             hhhhcccceEEEEEC--CH----HHHHHHHHHhhhhhhcCCEEEEEecCceEEecCC-CCChHHHHHHHHHHcCCCHH--
Confidence                00011011011  11    11223333332  12 23554 566789999999 99999999999999999887  


Q ss_pred             ceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeC--ChhHHHHHH
Q 040896          223 FLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLR--DPDEVMSFL  275 (288)
Q Consensus       223 ~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~--~~~~v~~~l  275 (288)
                       ++++||||.||++||+.+     |++++|+|+.+.  ..|++++.  +.+||+++|
T Consensus       206 -~~~~~GD~~nD~~m~~~~-----~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l  256 (256)
T TIGR00099       206 -DVIAFGDGMNDIEMLEAA-----GYGVAMGNADEELKALADYVTDSNNEDGVALAL  256 (256)
T ss_pred             -HEEEeCCcHHhHHHHHhC-----CceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence             999999999999999999     899999999763  67999986  467888764

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.96  E-value=2.6e-28  Score=214.70  Aligned_cols=232  Identities=15%  Similarity=0.261  Sum_probs=146.7

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAG   96 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~   96 (288)
                      .|+||+||||||++     ++..+++.++++|++|++.+ .|++||||+...+...+   ++. .++|++||+.|+.+++
T Consensus         4 ~kli~~DlDGTLl~-----~~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~-~~~i~~nGa~i~~~~~   77 (273)
T PRK00192          4 KLLVFTDLDGTLLD-----HHTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE-DPFIVENGAAIYIPKN   77 (273)
T ss_pred             ceEEEEcCcccCcC-----CCCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-CCEEEEcCcEEEeccc
Confidence            68999999999998     34568899999999999985 89999999999988765   443 4699999999987543


Q ss_pred             CcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhh------------------ccCCeEEE---ecCce
Q 040896           97 SLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIK------------------TIKGATVE---DNKFC  155 (288)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~e---~~~~~  155 (288)
                      .....   .  .........++...+..  ......+...+.....                  ..+....+   .....
T Consensus        78 ~~~~~---~--~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (273)
T PRK00192         78 YFPFQ---P--DGERLKGDYWVIELGPP--YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFS  150 (273)
T ss_pred             ccccC---C--ccccccCCceEEEcCCC--HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccC
Confidence            21000   0  00000000011000100  0112222221111000                  00000000   00000


Q ss_pred             EEEeccCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCC-CCCceeEEEcCCccc
Q 040896          156 ISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNN-ASDFLPLYIGDDKTD  234 (288)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~-~~~~~vv~~GDs~ND  234 (288)
                      ..+.+.. +    ....+.+.+.++.+ ++.+.+++.++||+|+ + +||.|+++++++++++. +   ++++|||+.||
T Consensus       151 ~~~~~~~-~----~~~~~~~~~~l~~~-~~~~~~~~~~~ei~~~-~-~Kg~al~~l~~~~~i~~~~---~v~~~GDs~ND  219 (273)
T PRK00192        151 EPFLWNG-S----EAAKERFEEALKRL-GLKVTRGGRFLHLLGG-G-DKGKAVRWLKELYRRQDGV---ETIALGDSPND  219 (273)
T ss_pred             CceeecC-c----hHHHHHHHHHHHHc-CCEEEECCeEEEEeCC-C-CHHHHHHHHHHHHhccCCc---eEEEEcCChhh
Confidence            0010000 1    12334444555544 4665556789999999 9 99999999999999998 8   99999999999


Q ss_pred             HHHHHHHHhcCCceEEEEecCCCC------ccc-eEEe--C--ChhHHHHHHHHHHHH
Q 040896          235 EDAFKVIRHMGRGYPIIVSSVPRE------TKA-LYSL--R--DPDEVMSFLRRLARW  281 (288)
Q Consensus       235 ~~Ml~~~~~~~~g~~v~v~na~~~------~~A-~~~~--~--~~~~v~~~l~~~~~~  281 (288)
                      ++||+.+     |++++|+||.+.      ..| ++++  .  +.+||++.|+++++.
T Consensus       220 i~m~~~a-----g~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~~  272 (273)
T PRK00192        220 LPMLEAA-----DIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLSK  272 (273)
T ss_pred             HHHHHhC-----CeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHhh
Confidence            9999999     899999999764      334 5666  3  478999999998763

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=99.96  E-value=1.6e-29  Score=212.95  Aligned_cols=197  Identities=23%  Similarity=0.336  Sum_probs=137.0

Q ss_pred             EEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcCCCCeEEEccCceeEeCCCCCcccC
Q 040896           23 VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQN  101 (288)
Q Consensus        23 li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~~~~~  101 (288)
                      +|++|+||||+++    ....++++++++|++|++++ .|+++|||+...+.++++..+.++|++||+.|+.+++.....
T Consensus         1 li~~D~DgTL~~~----~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~   76 (204)
T TIGR01484         1 LLFFDLDGTLLDP----NAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIE   76 (204)
T ss_pred             CEEEeCcCCCcCC----CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEc
Confidence            5899999999983    12679999999999999995 999999999999999875334789999999998754432110


Q ss_pred             CCCCcccccccCCCceeccCCCccchhHH---HHHHHHHHHHhhccCCeEEEecCceEEEeccCC--CcccHHHHHHHHH
Q 040896          102 NPKHETRTVDEQGNEVVHFQPAQEFLPQI---QEMIQVLEEKIKTIKGATVEDNKFCISVHFRRV--DEDDINTLQEMVN  176 (288)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~l~  176 (288)
                                          +...+..+.   +.+...+..+....++...+.+...+.+++...  .......+.+.++
T Consensus        77 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (204)
T TIGR01484        77 --------------------PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLE  136 (204)
T ss_pred             --------------------ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHH
Confidence                                000001111   111111111122344555666777777777653  1111112222222


Q ss_pred             HHHHhCCCeEEe-CCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEE
Q 040896          177 SIVEAYPNFRIS-GGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV  252 (288)
Q Consensus       177 ~~~~~~~~~~~~-~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v  252 (288)
                      ......+++.+. +++.++||+|+ +++|+.|++.++++++++.+   ++++|||+.||++||+.+     |++|+|
T Consensus       137 ~~~~~~~~~~~~~s~~~~~ev~p~-~~~K~~~~~~~~~~~~~~~~---~~~~~GD~~nD~~~~~~~-----~~~vam  204 (204)
T TIGR01484       137 KIGRNDLELEAIYVGKTDLEVLPA-GVDKGSALQALLKELNGKRD---EILAFGDSGNDEEMFEVA-----GLAVAV  204 (204)
T ss_pred             hhccccCcEEEEEecCCEEEEecC-CCChHHHHHHHHHHhCCCHH---HEEEEcCCHHHHHHHHHc-----CCceEC
Confidence            221112357776 68899999999 99999999999999998877   999999999999999999     889886

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=99.96  E-value=1.7e-28  Score=211.44  Aligned_cols=216  Identities=16%  Similarity=0.194  Sum_probs=141.3

Q ss_pred             EEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcC---CC-CeEEEccCceeEeCCCCC
Q 040896           23 VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ---LK-NVVYAGSHGMDISTPAGS   97 (288)
Q Consensus        23 li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~---~~-~~~~i~~nGa~i~~~~~~   97 (288)
                      +|++||||||++     ++..+++.+ ++++ +++++ .+++||||++..+..++.   +. ..++|++||+.|+.+...
T Consensus         1 li~~DlDgTLl~-----~~~~~~~~~-~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~   73 (236)
T TIGR02471         1 LIITDLDNTLLG-----DDEGLASFV-ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPEL   73 (236)
T ss_pred             CeEEeccccccC-----CHHHHHHHH-HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCC
Confidence            589999999998     445677766 7776 56664 899999999999999863   32 245999999998764321


Q ss_pred             c-ccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecC--ceEEEeccCCCcccHHHHHHH
Q 040896           98 L-KQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNK--FCISVHFRRVDEDDINTLQEM  174 (288)
Q Consensus        98 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~~~~~  174 (288)
                      . ...|..               . ....+.  ..++.+    +....++...+...  ....+++...+...  ...+.
T Consensus        74 ~~~~~~~~---------------~-~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~  129 (236)
T TIGR02471        74 QPDRFWQK---------------H-IDHDWR--RQAVVE----ALADIPGLTLQDDQEQGPFKISYLLDPEGE--PILPQ  129 (236)
T ss_pred             CCChhHHH---------------H-HhcCCC--HHHHHH----HHhcCCCcEeCChhcCCCeeEEEEECcccc--hHHHH
Confidence            1 101100               0 000000  111222    22334554333222  11223333212111  11233


Q ss_pred             HHHHHHhCC-CeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEE
Q 040896          175 VNSIVEAYP-NFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV  252 (288)
Q Consensus       175 l~~~~~~~~-~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v  252 (288)
                      +.+.++... .+.+ .++..++||+|+ ++|||.|+++|+++++++.+   ++++|||+.||++||+.+     |+||+|
T Consensus       130 ~~~~l~~~~~~~~~~~~~~~~~ei~~~-~~~K~~al~~l~~~~g~~~~---~~i~~GD~~nD~~ml~~~-----~~~iav  200 (236)
T TIGR02471       130 IRQRLRQQSQAAKVILSCGWFLDVLPL-RASKGLALRYLSYRWGLPLE---QILVAGDSGNDEEMLRGL-----TLGVVV  200 (236)
T ss_pred             HHHHHHhccCCEEEEEECCceEEEeeC-CCChHHHHHHHHHHhCCCHH---HEEEEcCCccHHHHHcCC-----CcEEEE
Confidence            334444332 2333 456688999999 99999999999999999877   999999999999999998     899999


Q ss_pred             ecCCCC--ccce----EEeC--ChhHHHHHHHHH
Q 040896          253 SSVPRE--TKAL----YSLR--DPDEVMSFLRRL  278 (288)
Q Consensus       253 ~na~~~--~~A~----~~~~--~~~~v~~~l~~~  278 (288)
                      +|+.++  ..|+    |++.  +.+||+++|+++
T Consensus       201 ~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~~  234 (236)
T TIGR02471       201 GNHDPELEGLRHQQRIYFANNPHAFGILEGINHY  234 (236)
T ss_pred             cCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence            999764  5677    7775  367999999764

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PLN02382 probable sucrose-phosphatase

Probab=99.95  E-value=2e-27  Score=219.18  Aligned_cols=229  Identities=16%  Similarity=0.154  Sum_probs=146.9

Q ss_pred             cCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHH-HHHhhcC-CEEEEcCCChhhHhhh---cCC-CCeEEEccCceeE
Q 040896           18 KGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAV-HEVAHFF-PTAIVSGRCLDKVSRF---VQL-KNVVYAGSHGMDI   91 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL-~~L~~~~-~v~i~TGR~~~~l~~~---~~~-~~~~~i~~nGa~i   91 (288)
                      .+.+.+|++||||||+++.   ++..+++..+.+| +++.+++ .++++|||++..+.++   +++ .+..+|++||+.|
T Consensus         6 ~~~~~lI~sDLDGTLL~~~---~~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I   82 (413)
T PLN02382          6 GSPRLMIVSDLDHTMVDHH---DPENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEI   82 (413)
T ss_pred             CCCCEEEEEcCCCcCcCCC---CccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEE
Confidence            3567899999999999842   1336776666766 8888775 8999999997777665   333 2335888899999


Q ss_pred             eCCCCCcc-cCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCCcccHHH
Q 040896           92 STPAGSLK-QNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINT  170 (288)
Q Consensus        92 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~  170 (288)
                      +..+.... ..|...                ....|.  ...+.+.+..+.........+++.+.+.+....   .....
T Consensus        83 ~~~~~~~~d~~w~~~----------------l~~~w~--~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~---~~~~~  141 (413)
T PLN02382         83 AYGESMVPDHGWVEY----------------LNKKWD--REIVVEETSKFPELKLQPETEQRPHKVSFYVDK---KKAQE  141 (413)
T ss_pred             EeCCCCccChhHHHH----------------HhccCC--hhhHHHHHhcCCCcccCCcccCCCeEEEEEech---HHhHH
Confidence            86543211 112110                000111  111222221110001111222334455554332   11223


Q ss_pred             HHHHHHHHHHhC-CCeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhc---CCCCCCCceeEEEcCCcccHHHHHHHHhcC
Q 040896          171 LQEMVNSIVEAY-PNFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTF---GFNNASDFLPLYIGDDKTDEDAFKVIRHMG  245 (288)
Q Consensus       171 ~~~~l~~~~~~~-~~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~---~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~  245 (288)
                      ..+.+.+.+... ..+.+ .+++.++||+|+ ++|||.||++|++++   |++.+   ++++||||.||++||+.+    
T Consensus       142 ~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~-g~sKg~Al~~L~~~~~~~gi~~~---~~iafGDs~NDleMl~~a----  213 (413)
T PLN02382        142 VIKELSERLEKRGLDVKIIYSGGIDLDVLPQ-GAGKGQALAYLLKKLKAEGKAPV---NTLVCGDSGNDAELFSVP----  213 (413)
T ss_pred             HHHHHHHHHHhcCCcEEEEEECCcEEEEEeC-CCCHHHHHHHHHHHhhhcCCChh---cEEEEeCCHHHHHHHhcC----
Confidence            344454444432 12443 567789999999 999999999999999   88877   999999999999999998    


Q ss_pred             Cc-eEEEEecCCCC--cc--------ceEEeC---ChhHHHHHHHHHH
Q 040896          246 RG-YPIIVSSVPRE--TK--------ALYSLR---DPDEVMSFLRRLA  279 (288)
Q Consensus       246 ~g-~~v~v~na~~~--~~--------A~~~~~---~~~~v~~~l~~~~  279 (288)
                       | +||+|+||.++  ..        +++++.   ..+|+++.|+++.
T Consensus       214 -g~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~  260 (413)
T PLN02382        214 -DVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFN  260 (413)
T ss_pred             -CCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhC
Confidence             8 89999999763  22        355543   4789999998875

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=99.95  E-value=4.3e-27  Score=200.63  Aligned_cols=194  Identities=17%  Similarity=0.280  Sum_probs=122.7

Q ss_pred             EEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCCC-
Q 040896           23 VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAGS-   97 (288)
Q Consensus        23 li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~~-   97 (288)
                      +|++||||||++     ++..+++.++++|++|++.+ +|++||||++..+..++   ++...++||+||+.|+..... 
T Consensus         1 ~i~~DlDGTLL~-----~~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~   75 (221)
T TIGR02463         1 WVFSDLDGTLLD-----SHSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWR   75 (221)
T ss_pred             CEEEeCCCCCcC-----CCCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccc
Confidence            589999999998     34446666999999999985 99999999999988875   443257999999999875332 


Q ss_pred             cccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhc----cC-----------CeE------EEecCceE
Q 040896           98 LKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKT----IK-----------GAT------VEDNKFCI  156 (288)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----------~~~------~e~~~~~~  156 (288)
                      ....|..             .......   .....+.+.+......    ..           +..      .+......
T Consensus        76 ~~~~~~~-------------~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (221)
T TIGR02463        76 EEPGYPR-------------IILGISY---GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASV  139 (221)
T ss_pred             cCCCceE-------------EecCCCH---HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCc
Confidence            1100000             0000110   1111111111110000    00           000      00000111


Q ss_pred             EEeccCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHH
Q 040896          157 SVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDED  236 (288)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~  236 (288)
                      .+... .+    ....+.+.+.+... ++.+.+++.++||+|+ +++||.|++++++++|++.+   ++++|||+.||++
T Consensus       140 ~~~~~-~~----~~~~~~~~~~l~~~-~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~lgi~~~---~vi~~GD~~NDi~  209 (221)
T TIGR02463       140 PLLWR-DS----DSRMPRFTALLADL-GLAIVQGNRFSHVLGA-SSSKGKAANWLKATYNQPDV---KTLGLGDGPNDLP  209 (221)
T ss_pred             cEEec-Cc----hhHHHHHHHHHHHc-CCeEEecCCeeEEecC-CCCHHHHHHHHHHHhCCCCC---cEEEECCCHHHHH
Confidence            11110 01    12233444445444 4666556789999999 99999999999999999988   9999999999999


Q ss_pred             HHHHHHhcCCceEEEE
Q 040896          237 AFKVIRHMGRGYPIIV  252 (288)
Q Consensus       237 Ml~~~~~~~~g~~v~v  252 (288)
                      ||+++     |+||++
T Consensus       210 ml~~a-----g~~va~  220 (221)
T TIGR02463       210 LLEVA-----DYAVVI  220 (221)
T ss_pred             HHHhC-----CceEEe
Confidence            99999     899986

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PTZ00174 phosphomannomutase; Provisional

Probab=99.95  E-value=1.1e-26  Score=201.47  Aligned_cols=203  Identities=16%  Similarity=0.222  Sum_probs=122.4

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcCCC---C-eEEEccCceeEeCC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQLK---N-VVYAGSHGMDISTP   94 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~~~---~-~~~i~~nGa~i~~~   94 (288)
                      +.|+|++||||||++     +++.+++.++++|+++++.+ .|+|||||++..+.+.++..   . .++||+||+.|+..
T Consensus         4 ~~klia~DlDGTLL~-----~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~   78 (247)
T PTZ00174          4 KKTILLFDVDGTLTK-----PRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD   78 (247)
T ss_pred             CCeEEEEECcCCCcC-----CCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence            479999999999998     56789999999999999995 89999999999998887632   1 36899999999964


Q ss_pred             CCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHH-----hhccCCeEEEecCceEEEec-cCCCcc--
Q 040896           95 AGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEK-----IKTIKGATVEDNKFCISVHF-RRVDED--  166 (288)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~e~~~~~~~~~~-~~~~~~--  166 (288)
                      +..+..       +.        +......   ....++.+.+...     .....+.+...........+ ......  
T Consensus        79 ~~~i~~-------~~--------i~~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (247)
T PTZ00174         79 GELFHS-------QS--------ILKFLGE---EKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEE  140 (247)
T ss_pred             CeEEEE-------Ec--------chhcCCH---HHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHH
Confidence            322110       00        0000111   2233333333221     01111222221111111110 000000  


Q ss_pred             ---c----H-HHHHHHHHHHH-HhCCCe--EEeC-CceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcC----
Q 040896          167 ---D----I-NTLQEMVNSIV-EAYPNF--RISG-GKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGD----  230 (288)
Q Consensus       167 ---~----~-~~~~~~l~~~~-~~~~~~--~~~~-~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GD----  230 (288)
                         .    . ....+.+.+.+ +.++++  ...+ +..++||+|+ |+|||+||++|+++    .+   +|++|||    
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~-gvsKg~al~~L~~~----~~---eviafGD~~~~  212 (247)
T PTZ00174        141 RDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPK-GWDKTYCLRHLEND----FK---EIHFFGDKTFE  212 (247)
T ss_pred             HHHHHhcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeC-CCcHHHHHHHHHhh----hh---hEEEEcccCCC
Confidence               0    0 01112222222 344433  2333 3579999999 99999999999999    24   9999999    


Q ss_pred             CcccHHHHHHHHhcCCceEEEEecCCC
Q 040896          231 DKTDEDAFKVIRHMGRGYPIIVSSVPR  257 (288)
Q Consensus       231 s~ND~~Ml~~~~~~~~g~~v~v~na~~  257 (288)
                      +.||++||++++.  .|++|  +||.+
T Consensus       213 ~~NDieMl~~~~~--~g~~v--~n~~~  235 (247)
T PTZ00174        213 GGNDYEIYNDPRT--IGHSV--KNPED  235 (247)
T ss_pred             CCCcHhhhhcCCC--ceEEe--CCHHH
Confidence            8999999997632  15555  46644

>PLN02423 phosphomannomutase

Probab=99.94  E-value=1.8e-25  Score=193.39  Aligned_cols=213  Identities=17%  Similarity=0.297  Sum_probs=131.3

Q ss_pred             cCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhcCCC---C-eEEEccCceeEeC
Q 040896           18 KGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLK---N-VVYAGSHGMDIST   93 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~~~~---~-~~~i~~nGa~i~~   93 (288)
                      ...++++|+||||||++     +++.++++++++|++|++++.|++||||++..+...++..   . .++|++||+.++.
T Consensus         4 ~~~~~i~~~D~DGTLl~-----~~~~i~~~~~~ai~~l~~~i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~   78 (245)
T PLN02423          4 RKPGVIALFDVDGTLTA-----PRKEATPEMLEFMKELRKVVTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHK   78 (245)
T ss_pred             CccceEEEEeccCCCcC-----CCCcCCHHHHHHHHHHHhCCEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEe
Confidence            34445677999999998     5678999999999999977899999999999998877532   1 3789999999985


Q ss_pred             CCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhh-----ccCCeEEEecCceEEEe--ccCCCcc
Q 040896           94 PAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIK-----TIKGATVEDNKFCISVH--FRRVDED  166 (288)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~e~~~~~~~~~--~~~~~~~  166 (288)
                      .+.......               +......   .....+.+.+..+..     ...+.+++.........  ...+...
T Consensus        79 ~g~~i~~~~---------------l~~~l~~---~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~  140 (245)
T PLN02423         79 DGKLIGTQS---------------LKSFLGE---DKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQE  140 (245)
T ss_pred             CCEEEEEec---------------ccccCCH---HHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHh
Confidence            433221100               0000111   123333333322111     11223333222111111  1111100


Q ss_pred             ------c---HHHHHHHH-HHHHHhCCCeEE---eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcC---
Q 040896          167 ------D---INTLQEMV-NSIVEAYPNFRI---SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGD---  230 (288)
Q Consensus       167 ------~---~~~~~~~l-~~~~~~~~~~~~---~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GD---  230 (288)
                            .   .....+.+ +.+.++++++.+   .+|..|+||+|+ |+|||.||+.|+     +.+   ++++|||   
T Consensus       141 ~~~~~~~i~~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~-gvnKg~al~~L~-----~~~---e~~aFGD~~~  211 (245)
T PLN02423        141 ERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQ-GWDKTYCLQFLE-----DFD---EIHFFGDKTY  211 (245)
T ss_pred             HHhhHHhhCccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeC-CCCHHHHHHHhc-----CcC---eEEEEeccCC
Confidence                  0   01111222 223345554333   345689999999 999999999999     455   9999999   


Q ss_pred             -CcccHHHHHHHHhcCCceEEEEecCCCCccceEEeCChhHHHHHHHHHH
Q 040896          231 -DKTDEDAFKVIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLA  279 (288)
Q Consensus       231 -s~ND~~Ml~~~~~~~~g~~v~v~na~~~~~A~~~~~~~~~v~~~l~~~~  279 (288)
                       +.||++||+...    -.+++             |++++++.++|++++
T Consensus       212 ~~~ND~eMl~~~~----~~~~~-------------~~~~~~~~~~~~~~~  244 (245)
T PLN02423        212 EGGNDHEIFESER----TIGHT-------------VTSPDDTREQCTALF  244 (245)
T ss_pred             CCCCcHHHHhCCC----cceEE-------------eCCHHHHHHHHHHhc
Confidence             799999999641    12332             678999999998875

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=99.94  E-value=1.6e-24  Score=205.63  Aligned_cols=247  Identities=17%  Similarity=0.214  Sum_probs=149.8

Q ss_pred             ccchhhHHHHHHhh----cCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc--
Q 040896            4 PSALDTFDRMVAAA----KGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV--   76 (288)
Q Consensus         4 ~~~~~~~~~~~~~~----~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~--   76 (288)
                      |+-+..=-.+++++    ..++|+||+||||||++     .+..+++.++++|++|++++ .|++||||++..+..++  
T Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~KLIfsDLDGTLLd-----~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~  469 (694)
T PRK14502        395 PDGELISRAARPSRLPSSGQFKKIVYTDLDGTLLN-----PLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNE  469 (694)
T ss_pred             CCCCccchhhhcccCCCcCceeeEEEEECcCCCcC-----CCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH
Confidence            44444444556664    24779999999999999     34567789999999999995 89999999999888765  


Q ss_pred             -CCCCeEEEccCceeEeCCCCCcccCCCCCcccccc-cCCCceeccCCCccchhHHHHHHHHHHHHhh-------ccCCe
Q 040896           77 -QLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVD-EQGNEVVHFQPAQEFLPQIQEMIQVLEEKIK-------TIKGA  147 (288)
Q Consensus        77 -~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  147 (288)
                       ++. .++||+||+.|+.+++... .+..     .+ ..+..++ +...-++ ..+.++.+.+.....       .....
T Consensus       470 Lgl~-~~~I~eNGA~I~~~~~~~~-~~~~-----~~~~~~~~iI-~~~~l~~-e~i~~IL~~lke~l~~~i~ihv~~~~~  540 (694)
T PRK14502        470 LGIK-DPFITENGGAIFIPKDYFR-LPFA-----YDRVAGNYLV-IELGMAY-KDIRHILKKALAEACTEIENSEKAGNI  540 (694)
T ss_pred             cCCC-CeEEEcCCCEEEECCCccc-cccc-----ccccCCCeEE-EEcCCCH-HHHHHHHHHHHHhhcceeeeeeccCcE
Confidence             433 5799999999998764210 0000     00 0000011 1111010 122223332221100       00001


Q ss_pred             EEEec-------------------------CceEEEeccCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCC
Q 040896          148 TVEDN-------------------------KFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDW  202 (288)
Q Consensus       148 ~~e~~-------------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~  202 (288)
                      ++...                         .+...+.+.. +    .+..+.+.+.+++. ++.+..++.++||+ + ++
T Consensus       541 ~i~~~~d~~~~ei~~~TgL~~~~a~~a~~Re~seKIl~~g-d----~e~Leel~~~L~~~-~l~v~~g~rfleI~-~-gv  612 (694)
T PRK14502        541 FITSFGDMSVEDVSRLTDLNLKQAELAKQREYSETVHIEG-D----KRSTNIVLNHIQQS-GLEYSFGGRFYEVT-G-GN  612 (694)
T ss_pred             EEecCCcccHHHHHHhhCCCHHHHHHHhhccCceeEEEcC-C----HHHHHHHHHHHHHc-CcEEEECCEEEEeC-C-CC
Confidence            11000                         0000000100 0    13344555555554 57776688999999 7 89


Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEE--cCCcccHHHHHHHHhcCCceEEEEecCCCC--cc--ce-EEeC--ChhHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYI--GDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TK--AL-YSLR--DPDEVMS  273 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~--GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~--A~-~~~~--~~~~v~~  273 (288)
                      |||.||++|++.++++.+   ++++|  |||.||++||+++     |+||+|++...+  ..  -. .++.  ++.|=.+
T Consensus       613 dKG~AL~~L~e~~gI~~~---eViafalGDs~NDisMLe~A-----g~gVAM~~~~~~~~~l~~~~~~~~~~~GP~GW~e  684 (694)
T PRK14502        613 DKGKAIKILNELFRLNFG---NIHTFGLGDSENDYSMLETV-----DSPILVQRPGNKWHKMRLRNPSYVKGVGPEGFSR  684 (694)
T ss_pred             CHHHHHHHHHHHhCCCcc---ceEEEEcCCcHhhHHHHHhC-----CceEEEcCCCCCCCccCCCCceecCCCCcHHHHH
Confidence            999999999999999877   88888  9999999999999     899999876432  11  11 1333  4666555


Q ss_pred             HHHHHHH
Q 040896          274 FLRRLAR  280 (288)
Q Consensus       274 ~l~~~~~  280 (288)
                      .++.++.
T Consensus       685 ai~~~L~  691 (694)
T PRK14502        685 AVTDIIL  691 (694)
T ss_pred             HHHHHHh
Confidence            5555543

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=99.94  E-value=2.4e-26  Score=198.98  Aligned_cols=219  Identities=20%  Similarity=0.231  Sum_probs=131.4

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc-CCEEEEcCCChhhHhhhc---CCC-CeEEEccCceeEeCC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF-FPTAIVSGRCLDKVSRFV---QLK-NVVYAGSHGMDISTP   94 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~-~~v~i~TGR~~~~l~~~~---~~~-~~~~i~~nGa~i~~~   94 (288)
                      +++||++||||||++     .+..-...+.+.++...+. ..++++|||+...+.+.+   ++| +.++||++|+.|+..
T Consensus         1 ~~~ll~sDlD~Tl~~-----~~~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~   75 (247)
T PF05116_consen    1 PPRLLASDLDGTLID-----GDDEALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYG   75 (247)
T ss_dssp             -SEEEEEETBTTTBH-----CHHHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEES
T ss_pred             CCEEEEEECCCCCcC-----CCHHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEc
Confidence            368999999999993     1212223344444411122 479999999999999875   332 467999999999983


Q ss_pred             CCC-cccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEE----EecCceEEEeccCCCcccHH
Q 040896           95 AGS-LKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATV----EDNKFCISVHFRRVDEDDIN  169 (288)
Q Consensus        95 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----e~~~~~~~~~~~~~~~~~~~  169 (288)
                      ... ....|...                ....|.  ...+.+.+.    .+++...    ..+.+.+++.+.....   .
T Consensus        76 ~~~~~d~~w~~~----------------i~~~w~--~~~v~~~l~----~~~~l~~q~~~~q~~~k~sy~~~~~~~---~  130 (247)
T PF05116_consen   76 ENWQPDEEWQAH----------------IDERWD--RERVEEILA----ELPGLRPQPESEQRPFKISYYVDPDDS---A  130 (247)
T ss_dssp             STTEE-HHHHHH----------------HHTT----HHHHHHHHH----CHCCEEEGGCCCGCCTCECEEEETTSH---C
T ss_pred             CCCcChHHHHHH----------------HHhcCC--hHHHHHHHH----HhhCcccCCccccCCeeEEEEEecccc---h
Confidence            311 11112110                011111  122333332    3344322    2334566665543222   2


Q ss_pred             HHHHHHHHHHHhCC-CeE-EeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCc
Q 040896          170 TLQEMVNSIVEAYP-NFR-ISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRG  247 (288)
Q Consensus       170 ~~~~~l~~~~~~~~-~~~-~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g  247 (288)
                      ...+.+++.++... .+. ++++..+++|.|+ ++|||.||++|+++++++.+   +++++|||.||++||...     .
T Consensus       131 ~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~-~a~K~~Al~~L~~~~~~~~~---~vl~aGDSgND~~mL~~~-----~  201 (247)
T PF05116_consen  131 DILEEIRARLRQRGLRVNVIYSNGRDLDILPK-GASKGAALRYLMERWGIPPE---QVLVAGDSGNDLEMLEGG-----D  201 (247)
T ss_dssp             HHHHHHHHHHHCCTCEEEEEECTCCEEEEEET-T-SHHHHHHHHHHHHT--GG---GEEEEESSGGGHHHHCCS-----S
T ss_pred             hHHHHHHHHHHHcCCCeeEEEccceeEEEccC-CCCHHHHHHHHHHHhCCCHH---HEEEEeCCCCcHHHHcCc-----C
Confidence            44566777776542 233 3577899999999 99999999999999999877   999999999999999765     6


Q ss_pred             eEEEEecCCCC--------cc--ce-EEeC--ChhHHHHHHHH
Q 040896          248 YPIIVSSVPRE--------TK--AL-YSLR--DPDEVMSFLRR  277 (288)
Q Consensus       248 ~~v~v~na~~~--------~~--A~-~~~~--~~~~v~~~l~~  277 (288)
                      .+|.|+|+.++        ..  .+ |+..  ...||.+-|++
T Consensus       202 ~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~~  244 (247)
T PF05116_consen  202 HGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQH  244 (247)
T ss_dssp             EEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHHH
T ss_pred             CEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHHH
Confidence            89999999765        11  22 4443  35678887765

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.91  E-value=4.5e-23  Score=178.27  Aligned_cols=204  Identities=12%  Similarity=0.089  Sum_probs=128.4

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAG   96 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~   96 (288)
                      .|+||+||||||+++     +..+++.++++|++|++.+ .|++||||++..+..++   ++. .++|++||+.|+.+..
T Consensus         1 ~KLIftDLDGTLLd~-----~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~-~p~I~eNGA~I~~p~~   74 (302)
T PRK12702          1 MRLVLSSLDGSLLDL-----EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE-HPFICEDGSAIYVPEH   74 (302)
T ss_pred             CcEEEEeCCCCCcCC-----CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC-CeEEEeCCcEEEEccc
Confidence            379999999999994     4568889999999999995 99999999999988874   444 4899999999998754


Q ss_pred             Cc-----ccCCCCCcccccccCCCceeccCCCccchhHHH---HHHHHHHH----H-------hhccCCeEE------Ee
Q 040896           97 SL-----KQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQ---EMIQVLEE----K-------IKTIKGATV------ED  151 (288)
Q Consensus        97 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~-------~~~~~~~~~------e~  151 (288)
                      ..     ...|.        .....+ .+.....+..++.   ++.+.+..    |       +....|...      ..
T Consensus        75 ~~~~~~~~~~~~--------~~~~~~-~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~  145 (302)
T PRK12702         75 YFPAGILDEQWQ--------HRPPYY-VCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQK  145 (302)
T ss_pred             cccccccccccc--------cCCCce-EEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHh
Confidence            21     00010        000001 1112222222222   22221100    0       001111100      12


Q ss_pred             cCceEEEeccCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeC---------------------CCCCCHHHHHHH
Q 040896          152 NKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRP---------------------CIDWDKGRALEY  210 (288)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~---------------------~~~~sKg~al~~  210 (288)
                      +.++-.+.+...+     .   .+.+.+.+. ++.+..|..|+.++.                     . +.+||.|+++
T Consensus       146 Re~SEp~~w~~~~-----~---~~~~~~~~~-g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~-~~dKg~A~~~  215 (302)
T PRK12702        146 REYSEIFSYSGDP-----A---RLREAFAQQ-EANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPN-SLPGEQAVQL  215 (302)
T ss_pred             ccCCcceEecCCH-----H---HHHHHHHHc-CCeEEecCceEEecccccccccccccccccccccccC-CCCHHHHHHH
Confidence            2333333333211     1   114445554 688888888888873                     2 6899999999


Q ss_pred             HHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecC
Q 040896          211 LLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSV  255 (288)
Q Consensus       211 l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na  255 (288)
                      |++.+.-..... .+++.|||.||++||+++     .++|.+.+.
T Consensus       216 L~~~y~~~~~~~-~tiaLGDspND~~mLe~~-----D~~vvi~~~  254 (302)
T PRK12702        216 LLDCYQRHLGPI-KALGIGCSPPDLAFLRWS-----EQKVVLPSP  254 (302)
T ss_pred             HHHHHHhccCCc-eEEEecCChhhHHHHHhC-----CeeEEecCC
Confidence            999986542212 899999999999999999     589988654

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=99.91  E-value=7.4e-24  Score=180.97  Aligned_cols=199  Identities=23%  Similarity=0.332  Sum_probs=116.7

Q ss_pred             EEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCCCc
Q 040896           23 VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAGSL   98 (288)
Q Consensus        23 li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~~~   98 (288)
                      +|||||||||++.     + .+++++.++|++|++.+ +|++||||+...+.+++   ++. .++|++||+.|+.+....
T Consensus         1 li~~DlDGTLl~~-----~-~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~-~~~I~~NGa~I~~~~~~~   73 (225)
T TIGR02461         1 VIFTDLDGTLLPP-----G-YEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE-PPFIVENGGAIFIPRGYF   73 (225)
T ss_pred             CEEEeCCCCCcCC-----C-CCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-CcEEEcCCcEEEecCccc
Confidence            5899999999982     2 35668999999999995 89999999999988865   443 479999999999864310


Q ss_pred             ccCCCCCcccccccCCCc-eeccCCCccchhHHHHHHHHHHH-Hh-hccCCeEEE-----------------ecCceEEE
Q 040896           99 KQNNPKHETRTVDEQGNE-VVHFQPAQEFLPQIQEMIQVLEE-KI-KTIKGATVE-----------------DNKFCISV  158 (288)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~e-----------------~~~~~~~~  158 (288)
                      .  |..-.   -+..+.. ........   ..+..+.+.+.. +. .........                 ...+.-.+
T Consensus        74 ~--~~~~~---~~~~~~~~i~~~~l~~---~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~  145 (225)
T TIGR02461        74 P--FPVGA---GREVGNYEVIELGKPV---AKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETI  145 (225)
T ss_pred             c--ccccc---cccCCCeEEEEcCCCH---HHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcc
Confidence            0  00000   0000000 00011111   112222222221 00 000000000                 00000000


Q ss_pred             eccCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCC--CCCCCceeEEEcCCcccHH
Q 040896          159 HFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGF--NNASDFLPLYIGDDKTDED  236 (288)
Q Consensus       159 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~--~~~~~~~vv~~GDs~ND~~  236 (288)
                       +.. +    .+..+.+.+.++.. ++.+..+..++++ ++ ++|||.|++++++.+++  +.+   ++++|||+.||++
T Consensus       146 -~~~-~----~e~~~~~~~~~~~~-~~~~~~s~~~~~i-~~-~~sK~~al~~l~~~~~~~~~~~---~~i~~GD~~nD~~  213 (225)
T TIGR02461       146 -FLW-S----REGWEAILVTARAR-GLKYTHGGRFYTV-HG-GSDKGKAIKRLLDLYKLRPGAI---ESVGLGDSENDFP  213 (225)
T ss_pred             -cCC-C----HHHHHHHHHHHHHc-CCcEEECCEEEEE-CC-CCCHHHHHHHHHHHhccccCcc---cEEEEcCCHHHHH
Confidence             000 1    12222333333332 5677666667775 77 99999999999999977  444   8999999999999


Q ss_pred             HHHHHHhcCCceEEEEe
Q 040896          237 AFKVIRHMGRGYPIIVS  253 (288)
Q Consensus       237 Ml~~~~~~~~g~~v~v~  253 (288)
                      ||+.+     |++|++|
T Consensus       214 ml~~a-----g~~v~v~  225 (225)
T TIGR02461       214 MFEVV-----DLAFLVG  225 (225)
T ss_pred             HHHhC-----CCcEecC
Confidence            99999     8999875

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]

Probab=99.86  E-value=5.5e-20  Score=177.69  Aligned_cols=232  Identities=26%  Similarity=0.327  Sum_probs=183.7

Q ss_pred             hhHHHHHHhh-cCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC--CEEEEcCCChhhHhhhc-CCCCeEE
Q 040896            8 DTFDRMVAAA-KGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF--PTAIVSGRCLDKVSRFV-QLKNVVY   83 (288)
Q Consensus         8 ~~~~~~~~~~-~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~--~v~i~TGR~~~~l~~~~-~~~~~~~   83 (288)
                      +.-++++..+ ++++++|++|+|||+....        +..+...|+.|..++  .|.|+|||.+..+..++ +.+++++
T Consensus       489 l~~~~~i~~y~~s~~rli~ldyd~t~~~~~--------~~~~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl  560 (732)
T KOG1050|consen  489 LTAEHIVSDYKKSKKRLILLDYDLTLIPPR--------SIKAISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGL  560 (732)
T ss_pred             cChhHhhhhhhhccceEEEecccccccCCC--------CchHHHHHHHHhcCCCCeEEEEEccCchhhhhhcccccccee
Confidence            3446677776 6789999999999998832        222899999999984  79999999999998875 6789999


Q ss_pred             EccCceeEeCCCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCC
Q 040896           84 AGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRV  163 (288)
Q Consensus        84 i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  163 (288)
                      +++||+++..+++     |..               ..  .+ ..|.+.+.+.+..+.+++||+++|.++..+.|+|+++
T Consensus       561 ~aEhG~f~r~~~~-----w~~---------------~~--~~-~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~a  617 (732)
T KOG1050|consen  561 AAEHGYFVRIPGK-----WET---------------CV--LD-LDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRNA  617 (732)
T ss_pred             ecccCceeccCCc-----eee---------------ec--cc-ccHHHHHHHHHHHHHhcCCCceecccCceEEEeeecc
Confidence            9999999998766     421               11  11 2588888888888899999999999999999999999


Q ss_pred             CcccHHHHHHHHHHHHHh-CCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHH
Q 040896          164 DEDDINTLQEMVNSIVEA-YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIR  242 (288)
Q Consensus       164 ~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~  242 (288)
                      +++....+..++.+.+.. ..++.+..++..+|+.|. |+|||.++..++..+.-+   .+.++|+||+..|+.|+..+.
T Consensus       618 d~~~g~~qA~el~~~l~~~~~~~~v~~g~~~Vev~~~-gvsk~~~~~~~~~~~~~~---~df~~c~g~d~tDed~~~~~~  693 (732)
T KOG1050|consen  618 DPEFGELQAKELLEHLESKNEPVEVVRGKHIVEVRPQ-GVSKGLAAERILSEMVKE---PDFVLCIGDDRTDEDMFEFIS  693 (732)
T ss_pred             CcchhHHHHHHHHHHhcccCCCeEEEecCceEEEccc-ccchHHHHHHHHHhcCCC---cceEEEecCCCChHHHHHHHh
Confidence            876544333344333333 224888999999999999 999999999999998833   349999999999999999987


Q ss_pred             hcC------CceEEEEecCCCCccceEEeCChhHHHHHHH
Q 040896          243 HMG------RGYPIIVSSVPRETKALYSLRDPDEVMSFLR  276 (288)
Q Consensus       243 ~~~------~g~~v~v~na~~~~~A~~~~~~~~~v~~~l~  276 (288)
                      ...      +-|++++|  ...+.|+|.+.++.+|.+.|+
T Consensus       694 ~~~~~~~~~~~F~~~~g--~~~t~a~~~~~~~~~v~~~l~  731 (732)
T KOG1050|consen  694 KAKDPEKVEEIFACTVG--QKPSKAKYFLDDTHEVIRLLQ  731 (732)
T ss_pred             hccCCcccceEEEEEcC--CCCcccccccCChHHHHhhcc
Confidence            643      12455555  567899999999999988764

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.79  E-value=4.7e-18  Score=138.95  Aligned_cols=207  Identities=17%  Similarity=0.280  Sum_probs=126.4

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh---cCCCCeEEEccCceeEeCCC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF---VQLKNVVYAGSHGMDISTPA   95 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~---~~~~~~~~i~~nGa~i~~~~   95 (288)
                      -.++||+|+||||+++.      .-...+...|.+|++.+ .|++||+++...+..+   +++++.++|++||+.|+.+.
T Consensus         6 ~~~lIFtDlD~TLl~~~------ye~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~   79 (274)
T COG3769           6 MPLLIFTDLDGTLLPHS------YEWQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK   79 (274)
T ss_pred             cceEEEEcccCcccCCC------CCCCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence            46899999999999942      23445678899999886 9999999999988775   67888999999999999875


Q ss_pred             CCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEE----------------------ecC
Q 040896           96 GSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVE----------------------DNK  153 (288)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e----------------------~~~  153 (288)
                      +-..     .....-...+   +++.   +.-..++.+.+.+....+...-.++.                      .++
T Consensus        80 ~~~~-----~~~~~r~~~g---~~~~---elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rE  148 (274)
T COG3769          80 GWFP-----FDGKPREISG---ISHI---ELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLRE  148 (274)
T ss_pred             cccc-----cCCCCceecc---eEee---ehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHH
Confidence            4321     1100000000   0010   11112333333332111111001110                      011


Q ss_pred             ceEEEeccCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcc
Q 040896          154 FCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKT  233 (288)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~N  233 (288)
                      ++.++..+..+     .........+.+. ++++..|..|..+... ...||.|++++++.+..-+. ...+++.|||.|
T Consensus       149 yseti~~rs~d-----~~~~~~~~~L~e~-glt~v~garf~~v~~a-s~gKg~Aa~~ll~~y~rl~~-~r~t~~~GDg~n  220 (274)
T COG3769         149 YSETIIWRSSD-----ERMAQFTARLNER-GLTFVHGARFWHVLDA-SAGKGQAANWLLETYRRLGG-ARTTLGLGDGPN  220 (274)
T ss_pred             hhhheeecccc-----hHHHHHHHHHHhc-CceEEeccceEEEecc-ccCccHHHHHHHHHHHhcCc-eeEEEecCCCCC
Confidence            22222222111     1112233333333 6888888788888877 77899999999988743221 115999999999


Q ss_pred             cHHHHHHHHhcCCceEEEEecCC
Q 040896          234 DEDAFKVIRHMGRGYPIIVSSVP  256 (288)
Q Consensus       234 D~~Ml~~~~~~~~g~~v~v~na~  256 (288)
                      |.|||+..     .+++.|++-.
T Consensus       221 D~Pl~ev~-----d~AfiV~~ln  238 (274)
T COG3769         221 DAPLLEVM-----DYAFIVKGLN  238 (274)
T ss_pred             cccHHHhh-----hhheeecccc
Confidence            99999999     5999999653

>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]

Probab=99.54  E-value=2.5e-13  Score=109.66  Aligned_cols=220  Identities=19%  Similarity=0.308  Sum_probs=139.3

Q ss_pred             hcCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhcCCC----CeEEEccCceeEe
Q 040896           17 AKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLK----NVVYAGSHGMDIS   92 (288)
Q Consensus        17 ~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~~~~----~~~~i~~nGa~i~   92 (288)
                      +.....|+.||+||||+.     ....+++++.+.|++|++...+.++-|..+..+.+.+|.+    -.+...+||..-+
T Consensus         7 ~r~~~~l~lfdvdgtLt~-----~r~~~~~e~~~~l~~lr~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~~y   81 (252)
T KOG3189|consen    7 ARDEETLCLFDVDGTLTP-----PRQKVTPEMLEFLQKLRKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLVAY   81 (252)
T ss_pred             hcCCceEEEEecCCcccc-----ccccCCHHHHHHHHHHhhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCeeEe
Confidence            344568999999999998     5678999999999999999999999999999998888632    3568899999877


Q ss_pred             CCCCCcccCCCCCcccccccCCCceeccCCCcc-chhHHHHHHHHHHHH-hhccCCeEEEecCceEEEe--ccCCCccc-
Q 040896           93 TPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQE-FLPQIQEMIQVLEEK-IKTIKGATVEDNKFCISVH--FRRVDEDD-  167 (288)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~--~~~~~~~~-  167 (288)
                      ..+...-.       ++        +..-+..+ +...++-..+++..+ +..-+|.++|.+.-.+.+.  -|++..+. 
T Consensus        82 k~gk~~~~-------Qs--------i~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER  146 (252)
T KOG3189|consen   82 KGGKLLSK-------QS--------IINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEER  146 (252)
T ss_pred             eCCcchhH-------HH--------HHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHH
Confidence            65443210       00        00001111 112233333444332 1123577888776544433  23443221 


Q ss_pred             --H------HHHHHHHHHHH-HhCC--CeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCC----
Q 040896          168 --I------NTLQEMVNSIV-EAYP--NFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDD----  231 (288)
Q Consensus       168 --~------~~~~~~l~~~~-~~~~--~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs----  231 (288)
                        +      ..+++.+.+.+ ++|+  ++++ ..|...+|+.|+ |++|.+.|+.+-.. |++     .+.+|||-    
T Consensus       147 ~eF~e~Dkk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~-GWDKtyCLqhle~d-gf~-----~IhFFGDkT~~G  219 (252)
T KOG3189|consen  147 NEFEELDKKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPK-GWDKTYCLQHLEKD-GFD-----TIHFFGDKTMPG  219 (252)
T ss_pred             HHHHHhhhhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCC-CcchhHHHHHhhhc-CCc-----eEEEeccccCCC
Confidence              0      12233322222 3454  4665 356799999999 99999999998776 665     99999995    


Q ss_pred             cccHHHHHHHHhcCCceEEEEecCCCCccceEEeCChhHHHHHHHHHHH
Q 040896          232 KTDEDAFKVIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLAR  280 (288)
Q Consensus       232 ~ND~~Ml~~~~~~~~g~~v~v~na~~~~~A~~~~~~~~~v~~~l~~~~~  280 (288)
                      .||-+.+.--                .++. +.+.++++..+.+++++.
T Consensus       220 GNDyEIf~dp----------------rtiG-hsV~~PdDT~~~~~~if~  251 (252)
T KOG3189|consen  220 GNDYEIFADP----------------RTIG-HSVTSPDDTVRICEEIFK  251 (252)
T ss_pred             CCcceeeeCC----------------cccc-ccccCchHHHHHHHHHhc
Confidence            5665544332                2222 235677777777777764

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=99.45  E-value=1.2e-12  Score=130.84  Aligned_cols=186  Identities=12%  Similarity=0.159  Sum_probs=109.3

Q ss_pred             CcEEEE--EecCCccccCcCCCCCCCCCHHHHHHHHHHhh---c--CCEEEEcCCChhhHhhhc---CCC---CeEEEcc
Q 040896           20 KKIVVF--LDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAH---F--FPTAIVSGRCLDKVSRFV---QLK---NVVYAGS   86 (288)
Q Consensus        20 ~~~li~--~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~---~--~~v~i~TGR~~~~l~~~~---~~~---~~~~i~~   86 (288)
                      .+++++  +|+|+| +.         ..+.+.+.++.+.+   .  ..|+++|||++..+..++   ++|   +..+||.
T Consensus       769 ~~~~~via~D~d~~-~~---------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~  838 (1050)
T TIGR02468       769 RKRLFVIAVDCYDD-KD---------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICN  838 (1050)
T ss_pred             cceEEEEEeccCCC-CC---------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Confidence            356666  999999 32         12223333334431   2  368999999999999975   454   4679999


Q ss_pred             CceeEeCCCC------Ccc--cCCCCCcccccccCCCceeccCCCccchhH-HHHHHHHHHHHhhc--------cCCeEE
Q 040896           87 HGMDISTPAG------SLK--QNNPKHETRTVDEQGNEVVHFQPAQEFLPQ-IQEMIQVLEEKIKT--------IKGATV  149 (288)
Q Consensus        87 nGa~i~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~  149 (288)
                      .|+.||++..      ...  ..|+.+                +..   .| .+.+.+.+..+...        -++...
T Consensus       839 vGTeIyy~~~~~~~~~~~~~D~~w~~h----------------I~~---rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~  899 (1050)
T TIGR02468       839 SGSELYYPSLNGSEEGKLVADQDYHSH----------------IEY---RWGGEGLRKTLVKWAASINEKKGENEEQIVE  899 (1050)
T ss_pred             CCcceeccCcCCCCCCCceECHHHHHH----------------HHc---cCCcHHHHHHHHHHhhhccccccccccccee
Confidence            9999998631      111  012111                111   12 12222222222111        122333


Q ss_pred             E----ecCceEEEeccCCCcccHHHHHHHHHHHHHhCC-CeEE-eC-CceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCC
Q 040896          150 E----DNKFCISVHFRRVDEDDINTLQEMVNSIVEAYP-NFRI-SG-GKKVMEIRPCIDWDKGRALEYLLDTFGFNNASD  222 (288)
Q Consensus       150 e----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~-~~-~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~  222 (288)
                      +    ...+++++...+.+..   ...+.+++.++... .+++ ++ +..+++|.|. .+|||.||++|..+||++.+  
T Consensus       900 Q~~~~q~~~k~SY~v~d~~~~---~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~-~ASKgqAlRyL~~rwgi~l~--  973 (1050)
T TIGR02468       900 EDEESSTDHCYAFKVKDPSKV---PPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPL-LASRSQALRYLFVRWGIELA--  973 (1050)
T ss_pred             cChhhCCCceEEEEecCcccC---ccHHHHHHHHHhCCCceEEEeecCCcEeeeeeC-CCCHHHHHHHHHHHcCCChH--
Confidence            2    2346666653332211   22345555555432 2443 44 3599999999 99999999999999999987  


Q ss_pred             cee-EEEcCCcc-cHH-HHHHH
Q 040896          223 FLP-LYIGDDKT-DED-AFKVI  241 (288)
Q Consensus       223 ~~v-v~~GDs~N-D~~-Ml~~~  241 (288)
                       ++ +++|||.| |.+ |+.-.
T Consensus       974 -~v~VfaGdSGntD~e~Ll~G~  994 (1050)
T TIGR02468       974 -NMAVFVGESGDTDYEGLLGGL  994 (1050)
T ss_pred             -HeEEEeccCCCCCHHHHhCCc
Confidence             88 55999999 955 55443

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5

Probab=99.26  E-value=9.8e-11  Score=97.34  Aligned_cols=194  Identities=17%  Similarity=0.267  Sum_probs=118.3

Q ss_pred             HHHHHHHHhhcCCEEEEcCCChhhHhhhc-CC---C-CeEEEccCceeEeCCCCCcccCCCCCcccccccCCCceeccCC
Q 040896           48 MRMAVHEVAHFFPTAIVSGRCLDKVSRFV-QL---K-NVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQP  122 (288)
Q Consensus        48 ~~~aL~~L~~~~~v~i~TGR~~~~l~~~~-~~---~-~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (288)
                      +.+.|++|++...|+++||-.+..+.+.+ +.   . -.++.++||+..|..+...   |.+.            +...+
T Consensus         1 M~~~L~~L~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~---~~~~------------~~~~l   65 (220)
T PF03332_consen    1 MAELLQKLRKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELI---WSQS------------IAEFL   65 (220)
T ss_dssp             HHHHHHHHHTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEE---EE--------------HHHHH
T ss_pred             CHHHHHHHHhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCch---hhHh------------HHHHc
Confidence            46789999988999999999999998877 32   1 2479999999988765432   2110            00001


Q ss_pred             Cc-cchhHHHHHHHHHHHH-hhccCCeEEEecCceEEEec--cCCCccc---HH------HHHHHHHH-HHHhCCC--eE
Q 040896          123 AQ-EFLPQIQEMIQVLEEK-IKTIKGATVEDNKFCISVHF--RRVDEDD---IN------TLQEMVNS-IVEAYPN--FR  186 (288)
Q Consensus       123 ~~-~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~--~~~~~~~---~~------~~~~~l~~-~~~~~~~--~~  186 (288)
                      .. .+...++.+..++... +...+|.++|++...+++..  ++++.+.   |.      .+++.+.+ +-+++|+  ++
T Consensus        66 gee~~~~~in~~l~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~  145 (220)
T PF03332_consen   66 GEEKLQKLINFCLRYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLT  145 (220)
T ss_dssp             HHHHHHHHHHHHHHHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEE
T ss_pred             CHHHHHHHHHHHHHHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceE
Confidence            11 1111222223332221 12246888999988777763  4444321   11      12333433 3346775  66


Q ss_pred             Ee-CCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCC----cccHHHHHHHHhcCCceEEEEecCCCCccc
Q 040896          187 IS-GGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDD----KTDEDAFKVIRHMGRGYPIIVSSVPRETKA  261 (288)
Q Consensus       187 ~~-~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs----~ND~~Ml~~~~~~~~g~~v~v~na~~~~~A  261 (288)
                      +. .|...+||.|+ |++|.++|++|.+.. +  +   ++++|||-    .||-|.+...+    =.|++          
T Consensus       146 ~siGGqiSiDvfp~-GwDKty~Lr~l~~~~-~--~---~I~FfGDkt~pGGNDyei~~~~r----t~g~~----------  204 (220)
T PF03332_consen  146 FSIGGQISIDVFPK-GWDKTYCLRHLEDEG-F--D---EIHFFGDKTFPGGNDYEIFEDPR----TIGHT----------  204 (220)
T ss_dssp             EEEETTTEEEEEET-T-SGGGGGGGTTTTT----S---EEEEEESS-STTSTTHHHHHSTT----SEEEE----------
T ss_pred             EecCCceEEccccC-CccHHHHHHHHHhcc-c--c---eEEEEehhccCCCCCceeeecCC----ccEEE----------
Confidence            64 46899999999 999999999987643 3  3   99999995    79999887642    12332          


Q ss_pred             eEEeCChhHHHHHHHHHHH
Q 040896          262 LYSLRDPDEVMSFLRRLAR  280 (288)
Q Consensus       262 ~~~~~~~~~v~~~l~~~~~  280 (288)
                         |+++++..+.|++++.
T Consensus       205 ---V~~p~DT~~~l~~l~~  220 (220)
T PF03332_consen  205 ---VTSPEDTIKQLKELFF  220 (220)
T ss_dssp             ----SSHHHHHHHHHHHHH
T ss_pred             ---eCCHHHHHHHHHHHhC
Confidence               6789999999998863

4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.24  E-value=4.8e-12  Score=113.38  Aligned_cols=68  Identities=24%  Similarity=0.251  Sum_probs=59.6

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeC--ChhHHHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLR--DPDEVMSFLR  276 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~--~~~~v~~~l~  276 (288)
                      +..|..+++.+++++|++++   ++++|||+.||++|++.+     |++++| ||.++  ..|+++++  +.++|+.+|-
T Consensus       246 ~k~K~~~L~~la~~lgi~~~---qtIaVGDg~NDl~m~~~A-----GlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~  316 (322)
T PRK11133        246 AQYKADTLTRLAQEYEIPLA---QTVAIGDGANDLPMIKAA-----GLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS  316 (322)
T ss_pred             cccHHHHHHHHHHHcCCChh---hEEEEECCHHHHHHHHHC-----CCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence            45899999999999999988   999999999999999999     899999 88774  68999987  4678887765


Q ss_pred             H
Q 040896          277 R  277 (288)
Q Consensus       277 ~  277 (288)
                      .
T Consensus       317 ~  317 (322)
T PRK11133        317 G  317 (322)
T ss_pred             c
Confidence            4

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.22  E-value=3.3e-11  Score=99.78  Aligned_cols=56  Identities=27%  Similarity=0.353  Sum_probs=48.4

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeC
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLR  266 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~  266 (288)
                      +|..+++.++++++++++   ++++|||+.||++|++.+     |++++|+++.+.  ..|+|++.
T Consensus        96 ~k~~~l~~~~~~~gl~~~---ev~~VGDs~~D~~~a~~a-----G~~~~v~~~~~~~~~~a~~v~~  153 (183)
T PRK09484         96 NKLIAFSDLLEKLAIAPE---QVAYIGDDLIDWPVMEKV-----GLSVAVADAHPLLLPRADYVTR  153 (183)
T ss_pred             cHHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHHC-----CCeEecCChhHHHHHhCCEEec
Confidence            567889999999999877   999999999999999999     899988877543  47889885

>smart00775 LNS2 LNS2 domain

Probab=99.00  E-value=7.1e-10  Score=89.36  Aligned_cols=71  Identities=13%  Similarity=0.095  Sum_probs=54.8

Q ss_pred             EEEEecCCccccCcCC------CCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHh---hhc--------CCCCeEEE
Q 040896           23 VVFLDYDGTLSPIVED------PDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVS---RFV--------QLKNVVYA   84 (288)
Q Consensus        23 li~~DlDGTL~~~~~~------~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~---~~~--------~~~~~~~i   84 (288)
                      ++++|+||||+..+.-      .....+++.+.++++++++++ +|+++|||+.....   +++        ++|..+++
T Consensus         1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li   80 (157)
T smart00775        1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL   80 (157)
T ss_pred             CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence            5899999999984200      001578999999999999996 89999999998764   433        24556899


Q ss_pred             ccCceeEeC
Q 040896           85 GSHGMDIST   93 (288)
Q Consensus        85 ~~nGa~i~~   93 (288)
                      +.||+.+..
T Consensus        81 ~~~g~~~~~   89 (157)
T smart00775       81 LSPDRLFAA   89 (157)
T ss_pred             EcCCcchhh
Confidence            999998864

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.98  E-value=2e-09  Score=83.29  Aligned_cols=55  Identities=18%  Similarity=0.222  Sum_probs=43.5

Q ss_pred             EEEEecCCccccCcCC---CCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcC
Q 040896           23 VVFLDYDGTLSPIVED---PDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ   77 (288)
Q Consensus        23 li~~DlDGTL~~~~~~---~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~   77 (288)
                      +++||+||||+.....   .....+.+.+.+.|++|++++ .++++|||+...+..++.
T Consensus         1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~   59 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLE   59 (139)
T ss_pred             CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHH
Confidence            4899999999984210   011267889999999999985 899999999888887763

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=98.81  E-value=4.2e-09  Score=85.79  Aligned_cols=72  Identities=19%  Similarity=0.297  Sum_probs=60.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCC--hh-HHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRD--PD-EVMSFLRR  277 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~--~~-~v~~~l~~  277 (288)
                      .|...++.++++++++++   ++++|||+.||++|++.+     |++++|+||.+  +.+|++++..  .+ .+.++++.
T Consensus        82 pkp~~~~~~~~~l~~~~~---ev~~iGD~~nDi~~~~~a-----g~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~  153 (169)
T TIGR02726        82 KKTEPYAQMLEEMNISDA---EVCYVGDDLVDLSMMKRV-----GLAVAVGDAVADVKEAAAYVTTARGGHGAVREVAEL  153 (169)
T ss_pred             CCHHHHHHHHHHcCcCHH---HEEEECCCHHHHHHHHHC-----CCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHHHH
Confidence            677899999999999877   999999999999999999     89999999976  4689998753  33 36777777


Q ss_pred             HHHHh
Q 040896          278 LARWK  282 (288)
Q Consensus       278 ~~~~~  282 (288)
                      ++..+
T Consensus       154 il~~~  158 (169)
T TIGR02726       154 ILKAQ  158 (169)
T ss_pred             HHHhc
Confidence            77644

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=98.66  E-value=3.9e-08  Score=75.83  Aligned_cols=52  Identities=12%  Similarity=0.045  Sum_probs=41.0

Q ss_pred             EEEEEecCCccccCcCCC-CCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHh
Q 040896           22 IVVFLDYDGTLSPIVEDP-DKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVS   73 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~-~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~   73 (288)
                      |+|++|+||||+.....+ ....+.+.++++|++|++.+ .|+++|||+.....
T Consensus         2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~   55 (126)
T TIGR01689         2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYE   55 (126)
T ss_pred             CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence            689999999999743111 12357789999999998875 89999999998766

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=98.60  E-value=4.3e-08  Score=78.83  Aligned_cols=73  Identities=22%  Similarity=0.225  Sum_probs=62.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCCh--hH-HHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRDP--DE-VMSFLRR  277 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~~--~~-v~~~l~~  277 (288)
                      +|..+++.++++++++++   +++++||+.||++|++.+     |.+++|.++.+.  ..|++++..+  +| +++++++
T Consensus        76 ~k~~~~~~~~~~~~~~~~---~~~~vGDs~~D~~~~~~a-----g~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~  147 (154)
T TIGR01670        76 NKLIAFSDILEKLALAPE---NVAYIGDDLIDWPVMEKV-----GLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCEL  147 (154)
T ss_pred             chHHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHH
Confidence            688999999999999887   999999999999999999     899999998653  5788888743  44 9999999


Q ss_pred             HHHHhh
Q 040896          278 LARWKK  283 (288)
Q Consensus       278 ~~~~~~  283 (288)
                      ++....
T Consensus       148 ~~~~~~  153 (154)
T TIGR01670       148 LLLAQG  153 (154)
T ss_pred             HHHhhC
Confidence            987653

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01684 viral_ppase viral phosphatase

Probab=98.59  E-value=1.4e-07  Score=82.31  Aligned_cols=71  Identities=18%  Similarity=0.056  Sum_probs=54.8

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCC-CHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCC-eEEEccCceeEeC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFM-SDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKN-VVYAGSHGMDIST   93 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i-~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~-~~~i~~nGa~i~~   93 (288)
                      ..++|+|||||||++..   ..-+| +|.+.++|.+|++.+ .++|+|+++...+.+.+   |+.. +..|.++|.....
T Consensus       125 ~~kvIvFDLDgTLi~~~---~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~  201 (301)
T TIGR01684       125 PPHVVVFDLDSTLITDE---EPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEE  201 (301)
T ss_pred             cceEEEEecCCCCcCCC---CccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccC
Confidence            56899999999999942   11224 499999999999996 89999999998877654   5653 3477778887654

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=98.56  E-value=2.6e-08  Score=78.02  Aligned_cols=74  Identities=22%  Similarity=0.249  Sum_probs=63.2

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC---hhHHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD---PDEVMSFL  275 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~---~~~v~~~l  275 (288)
                      --+|-.+.+.|++++++..+   ++.++||+.||+|+|+.+     |+++++.+|.+.  .+|+||+..   ...|.+++
T Consensus        81 ~~dK~~a~~~L~~~~~l~~e---~~ayiGDD~~Dlpvm~~v-----Gls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~  152 (170)
T COG1778          81 ISDKLAAFEELLKKLNLDPE---EVAYVGDDLVDLPVMEKV-----GLSVAVADAHPLLKQRADYVTSKKGGEGAVREVC  152 (170)
T ss_pred             hHhHHHHHHHHHHHhCCCHH---HhhhhcCccccHHHHHHc-----CCcccccccCHHHHHhhHhhhhccCcchHHHHHH
Confidence            56999999999999999988   999999999999999999     999999999875  689999862   44477777


Q ss_pred             HHHHHHh
Q 040896          276 RRLARWK  282 (288)
Q Consensus       276 ~~~~~~~  282 (288)
                      +-++..+
T Consensus       153 dlil~aq  159 (170)
T COG1778         153 DLILQAQ  159 (170)
T ss_pred             HHHHHcc
Confidence            6665544

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.39  E-value=8e-07  Score=77.65  Aligned_cols=71  Identities=14%  Similarity=0.011  Sum_probs=54.9

Q ss_pred             CCcEEEEEecCCccccCcCCCCCCCC---CHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCC-eEEEccCcee
Q 040896           19 GKKIVVFLDYDGTLSPIVEDPDKAFM---SDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKN-VVYAGSHGMD   90 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~~~~~~i---~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~-~~~i~~nGa~   90 (288)
                      ...++|+|||||||++.     ...+   +|.+.++|.+|++.+ .++|+|+++...+...+   ++.. +..|.++|..
T Consensus       126 ~~~~~i~~D~D~TL~~~-----~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i  200 (303)
T PHA03398        126 EIPHVIVFDLDSTLITD-----EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRK  200 (303)
T ss_pred             eeccEEEEecCCCccCC-----CCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCc
Confidence            35689999999999993     4455   689999999999996 89999988887776654   5543 3467777876


Q ss_pred             EeCC
Q 040896           91 ISTP   94 (288)
Q Consensus        91 i~~~   94 (288)
                      ....
T Consensus       201 ~~k~  204 (303)
T PHA03398        201 AGEY  204 (303)
T ss_pred             cccc
Confidence            6654

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=98.05  E-value=4.9e-06  Score=72.26  Aligned_cols=64  Identities=19%  Similarity=0.198  Sum_probs=49.6

Q ss_pred             EEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcC---CChhhHhhhc---CCC--CeEEEccCceeE
Q 040896           22 IVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSG---RCLDKVSRFV---QLK--NVVYAGSHGMDI   91 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TG---R~~~~l~~~~---~~~--~~~~i~~nGa~i   91 (288)
                      ++++||+||||++     .+..++ .+.++|++|++++ +|+++||   |+...+...+   |++  ..-+++.+|+.+
T Consensus         2 ~~~~~D~DGtl~~-----~~~~i~-~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~   74 (249)
T TIGR01457         2 KGYLIDLDGTMYK-----GKERIP-EAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATA   74 (249)
T ss_pred             CEEEEeCCCceEc-----CCeeCc-CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHH
Confidence            6899999999998     344454 7999999999995 8999995   8888877754   442  344788887754

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=98.03  E-value=3.9e-05  Score=65.31  Aligned_cols=69  Identities=20%  Similarity=0.237  Sum_probs=51.2

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC----CccceEEeCChhHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR----ETKALYSLRDPDEVMSFLR  276 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~----~~~A~~~~~~~~~v~~~l~  276 (288)
                      -.-..+..+++.++++++   +++++||+.+|+.|=+.+. .. ..+|..|....    ...+++++.+..++...|.
T Consensus       146 P~P~~l~~~~~~~~~~~~---~~l~VGDs~~Di~aA~~Ag-~~-~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~  218 (220)
T COG0546         146 PDPEPLLLLLEKLGLDPE---EALMVGDSLNDILAAKAAG-VP-AVGVTWGYNSREELAQAGADVVIDSLAELLALLA  218 (220)
T ss_pred             cCHHHHHHHHHHhCCChh---heEEECCCHHHHHHHHHcC-CC-EEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence            346788899999998866   9999999999999999983 10 13444443211    2469999999999888775

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.00  E-value=8.6e-06  Score=68.90  Aligned_cols=47  Identities=26%  Similarity=0.328  Sum_probs=42.8

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecC
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSV  255 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na  255 (288)
                      +-+|..+++.+++.+|++.+   +++++|||.||+|||+.+     |+++++...
T Consensus       142 ~~~K~~~l~~~~~~~g~~~~---~~~a~gDs~nDlpml~~a-----g~~ia~n~~  188 (212)
T COG0560         142 GEGKAKALRELAAELGIPLE---ETVAYGDSANDLPMLEAA-----GLPIAVNPK  188 (212)
T ss_pred             cchHHHHHHHHHHHcCCCHH---HeEEEcCchhhHHHHHhC-----CCCeEeCcC
Confidence            46899999999999999987   999999999999999999     888887633

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=97.89  E-value=1.3e-05  Score=69.96  Aligned_cols=64  Identities=16%  Similarity=0.118  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCc-eEEEEecCC-----C---CccceEEeCChhHHHH
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRG-YPIIVSSVP-----R---ETKALYSLRDPDEVMS  273 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g-~~v~v~na~-----~---~~~A~~~~~~~~~v~~  273 (288)
                      +....+.++++++.+++   +++++||+. +|+.+=+.+     | .++.|..+.     .   +..+++++++..++.+
T Consensus       181 ~p~~~~~~~~~~~~~~~---~~~~vGD~~~~Di~~a~~~-----G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~  252 (257)
T TIGR01458       181 SKTFFLEALRATGCEPE---EAVMIGDDCRDDVGGAQDC-----GMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVD  252 (257)
T ss_pred             CHHHHHHHHHHhCCChh---hEEEECCCcHHHHHHHHHc-----CCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHH
Confidence            45677888888998877   999999995 898877766     4 456664431     1   1247788888888877


Q ss_pred             HH
Q 040896          274 FL  275 (288)
Q Consensus       274 ~l  275 (288)
                      +|
T Consensus       253 ~l  254 (257)
T TIGR01458       253 LI  254 (257)
T ss_pred             HH
Confidence            54

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=97.89  E-value=2.1e-05  Score=61.07  Aligned_cols=55  Identities=15%  Similarity=-0.005  Sum_probs=41.0

Q ss_pred             EEEEEecCCccccCcCCCCCC-------CCCHHHHHHHHHHhhcC-CEEEEcCC-ChhhHhhhc
Q 040896           22 IVVFLDYDGTLSPIVEDPDKA-------FMSDTMRMAVHEVAHFF-PTAIVSGR-CLDKVSRFV   76 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~~~~-------~i~~~~~~aL~~L~~~~-~v~i~TGR-~~~~l~~~~   76 (288)
                      |++++||||||++........       .+.+.+.+.|++|++++ +++++|++ +.......+
T Consensus         1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l   64 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELL   64 (128)
T ss_pred             CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHH
Confidence            689999999999863110011       25679999999999886 89999999 666555555

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=97.85  E-value=5.6e-05  Score=64.92  Aligned_cols=71  Identities=17%  Similarity=0.163  Sum_probs=46.6

Q ss_pred             HHHHHHhhcCC-cEEEEEecCCccccCcCC--CCCCCCCH---------------------------HHHHHHHHHhhcC
Q 040896           10 FDRMVAAAKGK-KIVVFLDYDGTLSPIVED--PDKAFMSD---------------------------TMRMAVHEVAHFF   59 (288)
Q Consensus        10 ~~~~~~~~~~~-~~li~~DlDGTL~~~~~~--~~~~~i~~---------------------------~~~~aL~~L~~~~   59 (288)
                      .|+|......+ ...|+|||||||++....  ......++                           ...++|..|++++
T Consensus        51 ~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G  130 (237)
T TIGR01672        51 VAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG  130 (237)
T ss_pred             HHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCC
Confidence            57777776544 459999999999986431  00011122                           2788899999885


Q ss_pred             -CEEEEcCC----Chh---hHhhhcCCCC
Q 040896           60 -PTAIVSGR----CLD---KVSRFVQLKN   80 (288)
Q Consensus        60 -~v~i~TGR----~~~---~l~~~~~~~~   80 (288)
                       .++++|+|    +..   .+.+.++++.
T Consensus       131 ~~i~iVTnr~~~k~~~~a~~ll~~lGi~~  159 (237)
T TIGR01672       131 DAIFFVTGRTPGKTDTVSKTLAKNFHIPA  159 (237)
T ss_pred             CEEEEEeCCCCCcCHHHHHHHHHHhCCch
Confidence             89999999    322   3334456654

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PRK10444 UMP phosphatase; Provisional

Probab=97.82  E-value=2e-05  Score=68.38  Aligned_cols=49  Identities=16%  Similarity=0.120  Sum_probs=41.3

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF   75 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~   75 (288)
                      .++++||+||||+.     +. .+.|.+.++|++|++.+ +++++|+|+......+
T Consensus         1 ~~~v~~DlDGtL~~-----~~-~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~   50 (248)
T PRK10444          1 IKNVICDIDGVLMH-----DN-VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDL   50 (248)
T ss_pred             CcEEEEeCCCceEe-----CC-eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHH
Confidence            36899999999998     33 67889999999999985 8999999999655443

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=97.70  E-value=3.1e-05  Score=62.11  Aligned_cols=56  Identities=18%  Similarity=0.098  Sum_probs=38.2

Q ss_pred             cEEEEEecCCccccCcC--CCCCCCCCHH---HHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           21 KIVVFLDYDGTLSPIVE--DPDKAFMSDT---MRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~--~~~~~~i~~~---~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      .|++|+|+||||++...  ......+..-   ...+|++|++++ .++|+||++...+...+
T Consensus         1 ~~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~~~i~~Lk~~G~~i~IvTn~~~~~~~~~l   62 (154)
T TIGR01670         1 IRLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDGYGIRCALKSGIEVAIITGRKAKLVEDRC   62 (154)
T ss_pred             CeEEEEeCceeEEcCeEEECCCCcEEEEEechhHHHHHHHHHCCCEEEEEECCCCHHHHHHH
Confidence            37999999999998311  0011111111   113899999885 89999999998777765

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=97.68  E-value=4.1e-05  Score=67.60  Aligned_cols=44  Identities=14%  Similarity=0.090  Sum_probs=36.1

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChh
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLD   70 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~   70 (288)
                      .++|+||+||||++     +.. .-+.+.++|++|++.+ +|+++|+|+..
T Consensus         2 ~~~~~~D~DGtl~~-----~~~-~~~ga~e~l~~L~~~g~~~~~~Tnns~~   46 (279)
T TIGR01452         2 AQGFIFDCDGVLWL-----GER-VVPGAPELLDRLARAGKAALFVTNNSTK   46 (279)
T ss_pred             ccEEEEeCCCceEc-----CCe-eCcCHHHHHHHHHHCCCeEEEEeCCCCC
Confidence            47899999999998     333 4455999999999985 89999998754

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=97.68  E-value=0.00011  Score=59.64  Aligned_cols=49  Identities=16%  Similarity=0.113  Sum_probs=35.3

Q ss_pred             cEEEEEecCCccccCcCC------CCCCC-CCHHHHHHHHHHhhcC-CEEEEcCCCh
Q 040896           21 KIVVFLDYDGTLSPIVED------PDKAF-MSDTMRMAVHEVAHFF-PTAIVSGRCL   69 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~------~~~~~-i~~~~~~aL~~L~~~~-~v~i~TGR~~   69 (288)
                      .|++++|+||||+.....      +.+=+ +-+.+.++|++|++.+ .++|+|..+.
T Consensus        13 ~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~   69 (166)
T TIGR01664        13 SKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSG   69 (166)
T ss_pred             CcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence            588999999999974211      00001 2377899999999885 8999997654

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=97.62  E-value=4.8e-05  Score=59.16  Aligned_cols=47  Identities=30%  Similarity=0.307  Sum_probs=36.9

Q ss_pred             EEEEEecCCccccCc--C-CCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCC
Q 040896           22 IVVFLDYDGTLSPIV--E-DPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRC   68 (288)
Q Consensus        22 ~li~~DlDGTL~~~~--~-~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~   68 (288)
                      |+++||+||||++..  . ......+.+.+.++|+.|++.+ .++++|+++
T Consensus         1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~   51 (132)
T TIGR01662         1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQS   51 (132)
T ss_pred             CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCc
Confidence            589999999999521  0 0123467789999999999885 999999998

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>PLN02645 phosphoglycolate phosphatase

Probab=97.62  E-value=5.2e-05  Score=68.02  Aligned_cols=46  Identities=9%  Similarity=0.105  Sum_probs=38.6

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhh
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDK   71 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~   71 (288)
                      +.++++||+||||+.     .. .+-+.+.++|++|++++ +++++|+|+...
T Consensus        27 ~~~~~~~D~DGtl~~-----~~-~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~   73 (311)
T PLN02645         27 SVETFIFDCDGVIWK-----GD-KLIEGVPETLDMLRSMGKKLVFVTNNSTKS   73 (311)
T ss_pred             hCCEEEEeCcCCeEe-----CC-ccCcCHHHHHHHHHHCCCEEEEEeCCCCCC
Confidence            368999999999998     33 45578899999999986 899999999443

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=97.32  E-value=0.00014  Score=61.49  Aligned_cols=57  Identities=25%  Similarity=0.307  Sum_probs=48.0

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCCh
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRDP  268 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~~  268 (288)
                      .|...++.++++++++++   +++++|||.+|+++.+.+     |++++++ +.+  +.+|++++.+.
T Consensus       152 ~k~~~~~~~~~~~~~~~~---~~i~iGDs~~Di~aa~~a-----g~~i~~~-~~~~~~~~a~~~i~~~  210 (219)
T TIGR00338       152 YKGKTLLILLRKEGISPE---NTVAVGDGANDLSMIKAA-----GLGIAFN-AKPKLQQKADICINKK  210 (219)
T ss_pred             ccHHHHHHHHHHcCCCHH---HEEEEECCHHHHHHHHhC-----CCeEEeC-CCHHHHHhchhccCCC
Confidence            489999999999999877   999999999999999999     7888875 333  25788887754

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=97.25  E-value=0.00018  Score=58.60  Aligned_cols=41  Identities=24%  Similarity=0.276  Sum_probs=36.4

Q ss_pred             eCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          197 RPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       197 ~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      .+. +.+|+.+++.+++.++++.+   +++++|||.||++|++.+
T Consensus       137 ~~~-~~~K~~~l~~~~~~~~~~~~---~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       137 NPE-GECKGKVLKELLEESKITLK---KIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             cCC-cchHHHHHHHHHHHhCCCHH---HEEEEeCCHHHHHHHhcC
Confidence            466 78999999999999988876   999999999999999863

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.24  E-value=0.00037  Score=70.72  Aligned_cols=69  Identities=19%  Similarity=0.173  Sum_probs=53.8

Q ss_pred             EEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEe--CCh
Q 040896          193 VMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSL--RDP  268 (288)
Q Consensus       193 ~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~--~~~  268 (288)
                      +.++.|.   .|..+++.+.++    ++   .++++||+.||.+|++.+     |.+|+|||+.+.  ..|++++  ++.
T Consensus       693 ~~~~~p~---~K~~~i~~l~~~----~~---~v~~vGDg~nD~~al~~A-----gvgia~g~g~~~a~~~ad~vl~~~~~  757 (834)
T PRK10671        693 IAGVLPD---GKAEAIKRLQSQ----GR---QVAMVGDGINDAPALAQA-----DVGIAMGGGSDVAIETAAITLMRHSL  757 (834)
T ss_pred             EeCCCHH---HHHHHHHHHhhc----CC---EEEEEeCCHHHHHHHHhC-----CeeEEecCCCHHHHHhCCEEEecCCH
Confidence            3445555   698888887543    44   899999999999999999     899999998663  5788776  367


Q ss_pred             hHHHHHHH
Q 040896          269 DEVMSFLR  276 (288)
Q Consensus       269 ~~v~~~l~  276 (288)
                      +++..+++
T Consensus       758 ~~i~~~i~  765 (834)
T PRK10671        758 MGVADALA  765 (834)
T ss_pred             HHHHHHHH
Confidence            78888775

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=97.20  E-value=0.00041  Score=57.61  Aligned_cols=46  Identities=26%  Similarity=0.302  Sum_probs=41.3

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecC
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSV  255 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na  255 (288)
                      -+|+.+++.+++.++++++   +++++|||.+|++|++.+     |+++++...
T Consensus       146 ~~k~~~~~~~~~~~~~~~~---~~i~iGDs~~D~~~a~~a-----g~~~a~~~~  191 (201)
T TIGR01491       146 DNKGEAVERLKRELNPSLT---ETVAVGDSKNDLPMFEVA-----DISISLGDE  191 (201)
T ss_pred             ccHHHHHHHHHHHhCCCHH---HEEEEcCCHhHHHHHHhc-----CCeEEECCC
Confidence            4799999999999999877   999999999999999999     899888643

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=97.17  E-value=0.00054  Score=70.15  Aligned_cols=68  Identities=19%  Similarity=0.239  Sum_probs=49.4

Q ss_pred             EEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCC--h
Q 040896          193 VMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRD--P  268 (288)
Q Consensus       193 ~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~--~  268 (288)
                      +-...|.   .|...++.+.+ .   ++   .|.++||+.||.+||+.+     +.||+|+++.+  +..|++++.+  .
T Consensus       611 ~ar~~P~---~K~~iV~~lq~-~---g~---~va~iGDG~ND~~alk~A-----dVGia~g~g~~~ak~aAD~vl~dd~f  675 (917)
T TIGR01116       611 FSRVEPS---HKSELVELLQE-Q---GE---IVAMTGDGVNDAPALKKA-----DIGIAMGSGTEVAKEASDMVLADDNF  675 (917)
T ss_pred             EEecCHH---HHHHHHHHHHh-c---CC---eEEEecCCcchHHHHHhC-----CeeEECCCCcHHHHHhcCeEEccCCH
Confidence            3344455   68777776543 2   33   777899999999999999     79999998865  3589999876  4


Q ss_pred             hHHHHHH
Q 040896          269 DEVMSFL  275 (288)
Q Consensus       269 ~~v~~~l  275 (288)
                      ..+.+.+
T Consensus       676 ~~i~~~i  682 (917)
T TIGR01116       676 ATIVAAV  682 (917)
T ss_pred             HHHHHHH
Confidence            4555544

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=97.13  E-value=0.0016  Score=63.14  Aligned_cols=67  Identities=21%  Similarity=0.241  Sum_probs=51.1

Q ss_pred             EEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeC--Chh
Q 040896          194 MEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLR--DPD  269 (288)
Q Consensus       194 ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~~~  269 (288)
                      -++.|.   .|...++.+.+    +++   +++++||+.||.+|++.+     |.+++|+++.+  +..|++++.  +.+
T Consensus       448 ~~~~p~---~K~~~v~~l~~----~~~---~v~~VGDg~nD~~al~~A-----~vgia~g~g~~~a~~~Advvl~~~~l~  512 (562)
T TIGR01511       448 AEVLPD---DKAALIKELQE----KGR---VVAMVGDGINDAPALAQA-----DVGIAIGAGTDVAIEAADVVLMRNDLN  512 (562)
T ss_pred             ccCChH---HHHHHHHHHHH----cCC---EEEEEeCCCccHHHHhhC-----CEEEEeCCcCHHHHhhCCEEEeCCCHH
Confidence            344444   88888888776    334   999999999999999999     79999998754  247888874  566


Q ss_pred             HHHHHH
Q 040896          270 EVMSFL  275 (288)
Q Consensus       270 ~v~~~l  275 (288)
                      ++..++
T Consensus       513 ~l~~~i  518 (562)
T TIGR01511       513 DVATAI  518 (562)
T ss_pred             HHHHHH
Confidence            665554

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=97.13  E-value=0.0005  Score=57.31  Aligned_cols=46  Identities=24%  Similarity=0.244  Sum_probs=40.6

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEec
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSS  254 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~n  254 (288)
                      +-.|..+++.+++..+++.+   +++++|||.+|++|++.+     |.++++..
T Consensus       153 g~~K~~~l~~~~~~~~~~~~---~~~~~gDs~~D~~~~~~a-----~~~~~v~~  198 (202)
T TIGR01490       153 GEGKVHALAELLAEEQIDLK---DSYAYGDSISDLPLLSLV-----GHPYVVNP  198 (202)
T ss_pred             ChHHHHHHHHHHHHcCCCHH---HcEeeeCCcccHHHHHhC-----CCcEEeCC
Confidence            56899999999999998877   999999999999999999     77877653

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=97.09  E-value=0.00065  Score=57.08  Aligned_cols=66  Identities=8%  Similarity=0.033  Sum_probs=47.2

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC-CccceE--EeCChhHHHHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR-ETKALY--SLRDPDEVMSFLRR  277 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~-~~~A~~--~~~~~~~v~~~l~~  277 (288)
                      +-.|...++.+. ..+.      +++++|||.||++|++.+     |+++++.-.+. ...|+-  ++.+.+++.+.+..
T Consensus       130 ~~~K~~~l~~l~-~~~~------~~v~vGDs~nDl~ml~~A-----g~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~~  197 (203)
T TIGR02137       130 KDPKRQSVIAFK-SLYY------RVIAAGDSYNDTTMLSEA-----HAGILFHAPENVIREFPQFPAVHTYEDLKREFLK  197 (203)
T ss_pred             cchHHHHHHHHH-hhCC------CEEEEeCCHHHHHHHHhC-----CCCEEecCCHHHHHhCCCCCcccCHHHHHHHHHH
Confidence            458999999884 4442      789999999999999999     89998874322 233432  24577777776655


Q ss_pred             H
Q 040896          278 L  278 (288)
Q Consensus       278 ~  278 (288)
                      .
T Consensus       198 ~  198 (203)
T TIGR02137       198 A  198 (203)
T ss_pred             H
Confidence            4

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=97.08  E-value=0.0023  Score=55.05  Aligned_cols=60  Identities=15%  Similarity=0.206  Sum_probs=42.2

Q ss_pred             hHHHHHHhhcCC-cEEEEEecCCccccCcCC---------C--------------------CCCCCCHHHHHHHHHHhhc
Q 040896            9 TFDRMVAAAKGK-KIVVFLDYDGTLSPIVED---------P--------------------DKAFMSDTMRMAVHEVAHF   58 (288)
Q Consensus         9 ~~~~~~~~~~~~-~~li~~DlDGTL~~~~~~---------~--------------------~~~~i~~~~~~aL~~L~~~   58 (288)
                      -+|+|......+ ...|++|+|||+++....         +                    ....+-+.+++.|+.|+++
T Consensus        50 ~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~  129 (237)
T PRK11009         50 SVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKR  129 (237)
T ss_pred             EHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHC
Confidence            367787776544 559999999999962110         0                    0112233489999999888


Q ss_pred             C-CEEEEcCCC
Q 040896           59 F-PTAIVSGRC   68 (288)
Q Consensus        59 ~-~v~i~TGR~   68 (288)
                      + .++++|||+
T Consensus       130 G~~I~iVTnR~  140 (237)
T PRK11009        130 GDSIYFITGRT  140 (237)
T ss_pred             CCeEEEEeCCC
Confidence            5 899999996

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=97.07  E-value=0.00053  Score=50.93  Aligned_cols=40  Identities=15%  Similarity=0.117  Sum_probs=31.8

Q ss_pred             EEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCCh
Q 040896           24 VFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCL   69 (288)
Q Consensus        24 i~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~   69 (288)
                      ++||+||||..      ...+-|.+.++|++|++.+ +++++|-.+.
T Consensus         1 ~l~D~dGvl~~------g~~~ipga~e~l~~L~~~g~~~~~lTNns~   41 (101)
T PF13344_consen    1 FLFDLDGVLYN------GNEPIPGAVEALDALRERGKPVVFLTNNSS   41 (101)
T ss_dssp             EEEESTTTSEE------TTEE-TTHHHHHHHHHHTTSEEEEEES-SS
T ss_pred             CEEeCccEeEe------CCCcCcCHHHHHHHHHHcCCCEEEEeCCCC
Confidence            68999999998      3456778899999999996 7888886554

...

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=97.06  E-value=0.00058  Score=54.24  Aligned_cols=47  Identities=17%  Similarity=0.157  Sum_probs=34.3

Q ss_pred             EEEEEecCCccccCcCCC-----CCCCCCHHHHHHHHHHhhcC-CEEEEcCCC
Q 040896           22 IVVFLDYDGTLSPIVEDP-----DKAFMSDTMRMAVHEVAHFF-PTAIVSGRC   68 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~-----~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~   68 (288)
                      ++++||+||||.......     ..-++-+.+.++|+.|++++ .++|+|..+
T Consensus         1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~   53 (147)
T TIGR01656         1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQS   53 (147)
T ss_pred             CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence            478999999999853210     01235678899999999885 788888763

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway

Probab=96.98  E-value=0.065  Score=48.56  Aligned_cols=62  Identities=16%  Similarity=0.061  Sum_probs=41.0

Q ss_pred             HHHHHhhc-CCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc-CCEEEEcCCChhhHhhh
Q 040896           11 DRMVAAAK-GKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF-FPTAIVSGRCLDKVSRF   75 (288)
Q Consensus        11 ~~~~~~~~-~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~-~~v~i~TGR~~~~l~~~   75 (288)
                      .++.+... .+.+|+-||=|+||..++.+-   ..+..++.-|-+|-+. ..|+|+|.=.+....++
T Consensus       136 AQi~al~~~~~L~LvTFDgDvTLY~DG~sl---~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY  199 (408)
T PF06437_consen  136 AQIMALAKNYGLKLVTFDGDVTLYEDGASL---EPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKY  199 (408)
T ss_pred             HHHHHhcccCCceEEEEcCCcccccCCCCC---CCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHH
Confidence            44555543 478999999999999854321   1233455555555555 59999998887664443

; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=96.97  E-value=0.0011  Score=57.14  Aligned_cols=46  Identities=15%  Similarity=0.156  Sum_probs=37.3

Q ss_pred             EEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEc---CCChhhHhhh
Q 040896           24 VFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVS---GRCLDKVSRF   75 (288)
Q Consensus        24 i~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~T---GR~~~~l~~~   75 (288)
                      ++||+||||++     ... +-+.+.++|+.|++++ ++.++|   ||+...+.+.
T Consensus         1 ~lfD~DGvL~~-----~~~-~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~   50 (236)
T TIGR01460         1 FLFDIDGVLWL-----GHK-PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEK   50 (236)
T ss_pred             CEEeCcCccCc-----CCc-cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHH
Confidence            57999999998     333 4458999999999885 888887   8999877664

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=96.96  E-value=0.0006  Score=55.83  Aligned_cols=62  Identities=16%  Similarity=0.093  Sum_probs=44.3

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceE--EEEecCC--CC---ccceEEeCChhHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYP--IIVSSVP--RE---TKALYSLRDPDEVM  272 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~--v~v~na~--~~---~~A~~~~~~~~~v~  272 (288)
                      -+...+...+++++++++   ++++|||+.+|+..=+.+     |+.  +.+.-+.  ..   ..|++++++..++.
T Consensus       107 P~p~~~~~a~~~~~~~~~---~~v~VGDs~~Di~aA~~a-----G~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~  175 (176)
T TIGR00213       107 PKPGMLLQARKELHIDMA---QSYMVGDKLEDMQAGVAA-----KVKTNVLVRTGKPITPEAENIADWVLNSLADLP  175 (176)
T ss_pred             CCHHHHHHHHHHcCcChh---hEEEEcCCHHHHHHHHHC-----CCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence            356678888888999887   999999999998877776     553  3443332  11   24788888777653

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01675 plant-AP plant acid phosphatase

Probab=96.93  E-value=0.0022  Score=54.58  Aligned_cols=54  Identities=15%  Similarity=0.015  Sum_probs=41.7

Q ss_pred             cCCcEEEEEecCCccccCc---------------------CCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhh
Q 040896           18 KGKKIVVFLDYDGTLSPIV---------------------EDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDK   71 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~~~---------------------~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~   71 (288)
                      ..++-+++||+|.|++...                     ........-+.+++++++|++.+ .|+++|||+...
T Consensus        74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~  149 (229)
T TIGR01675        74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEEL  149 (229)
T ss_pred             CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence            3467899999999999721                     00124456678899999999985 899999999765

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=96.91  E-value=0.0013  Score=63.48  Aligned_cols=67  Identities=21%  Similarity=0.194  Sum_probs=51.1

Q ss_pred             EEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEe-cCCC--CccceEEe--CCh
Q 040896          194 MEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVS-SVPR--ETKALYSL--RDP  268 (288)
Q Consensus       194 ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~-na~~--~~~A~~~~--~~~  268 (288)
                      -++.|.   +|...++.+.+..    +   +++++||+.||.+|++.+     |.++++| ++.+  +..|++++  ++.
T Consensus       407 ~~~~p~---~K~~~i~~l~~~~----~---~v~~vGDg~nD~~al~~A-----~vgia~g~~~~~~~~~~ad~vl~~~~l  471 (536)
T TIGR01512       407 AELLPE---DKLEIVKELREKY----G---PVAMVGDGINDAPALAAA-----DVGIAMGASGSDVAIETADVVLLNDDL  471 (536)
T ss_pred             hccCcH---HHHHHHHHHHhcC----C---EEEEEeCCHHHHHHHHhC-----CEEEEeCCCccHHHHHhCCEEEECCCH
Confidence            344454   8888777776543    4   999999999999999999     8999999 5544  25788888  567


Q ss_pred             hHHHHHH
Q 040896          269 DEVMSFL  275 (288)
Q Consensus       269 ~~v~~~l  275 (288)
                      .++...+
T Consensus       472 ~~l~~~i  478 (536)
T TIGR01512       472 SRLPQAI  478 (536)
T ss_pred             HHHHHHH
Confidence            7776654

.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=96.88  E-value=0.0015  Score=51.66  Aligned_cols=57  Identities=19%  Similarity=0.155  Sum_probs=39.7

Q ss_pred             CcEEEEEecCCccccC----cCC-CCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           20 KKIVVFLDYDGTLSPI----VED-PDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~----~~~-~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      ..|++++|+||||++=    +.+ .+-....-+-=..|+-|.+.+ .++|+|||....+....
T Consensus         7 ~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIITGr~s~ive~Ra   69 (170)
T COG1778           7 NIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIITGRDSPIVEKRA   69 (170)
T ss_pred             hceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEeCCCCHHHHHHH
Confidence            4899999999999971    111 111122223345677788775 99999999999888864

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=96.87  E-value=0.0029  Score=53.53  Aligned_cols=67  Identities=16%  Similarity=0.223  Sum_probs=53.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCC------CccceEEeCChhHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPR------ETKALYSLRDPDEVMSFL  275 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~------~~~A~~~~~~~~~v~~~l  275 (288)
                      .|..+++.+++.++++++   ++++|||+.+|+++.+.+     |+ ++.+..+..      ...+++++++..++..+|
T Consensus       150 p~~~~~~~~~~~~~~~~~---~~i~igD~~~Di~~a~~~-----g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l  221 (226)
T PRK13222        150 PDPAPLLLACEKLGLDPE---EMLFVGDSRNDIQAARAA-----GCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL  221 (226)
T ss_pred             cChHHHHHHHHHcCCChh---heEEECCCHHHHHHHHHC-----CCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence            457899999999999877   999999999999999998     54 666654321      135789999999988877


Q ss_pred             HH
Q 040896          276 RR  277 (288)
Q Consensus       276 ~~  277 (288)
                      .+
T Consensus       222 ~~  223 (226)
T PRK13222        222 GL  223 (226)
T ss_pred             HH
Confidence            54

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=96.85  E-value=0.00089  Score=54.00  Aligned_cols=44  Identities=32%  Similarity=0.434  Sum_probs=30.6

Q ss_pred             EEEEEecCCccccCcC------CCCCC-CCCHHHHHHHHHHhhcC-CEEEEc
Q 040896           22 IVVFLDYDGTLSPIVE------DPDKA-FMSDTMRMAVHEVAHFF-PTAIVS   65 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~------~~~~~-~i~~~~~~aL~~L~~~~-~v~i~T   65 (288)
                      |+++||+||||.....      ++++- .+++.+.++|++|.+.+ .|+|+|
T Consensus         1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvT   52 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVT   52 (159)
T ss_dssp             SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEE
T ss_pred             CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEe
Confidence            5899999999997431      22232 34567999999998887 788877

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=96.85  E-value=0.0024  Score=55.81  Aligned_cols=66  Identities=21%  Similarity=0.099  Sum_probs=46.4

Q ss_pred             chhhHHHHHHhhcCCcEEEEEecCCccccCcC--------C-C------------CCCCCCHHHHHHHHHHhhcC-CEEE
Q 040896            6 ALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVE--------D-P------------DKAFMSDTMRMAVHEVAHFF-PTAI   63 (288)
Q Consensus         6 ~~~~~~~~~~~~~~~~~li~~DlDGTL~~~~~--------~-~------------~~~~i~~~~~~aL~~L~~~~-~v~i   63 (288)
                      |..-|++.......++..|++|+|+|+++...        + +            ....+-|.+.+.|+.|.+.+ .+++
T Consensus        60 A~~~~~~~~~~~~~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~i  139 (266)
T TIGR01533        60 AKMRLDNNLKKVKDKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFY  139 (266)
T ss_pred             HHHHHHHHHhccCCCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEE
Confidence            34456666654455678999999999986321        0 0            12234567899999999885 8999


Q ss_pred             EcCCChhh
Q 040896           64 VSGRCLDK   71 (288)
Q Consensus        64 ~TGR~~~~   71 (288)
                      +|+|+...
T Consensus       140 VTnR~~~~  147 (266)
T TIGR01533       140 VSNRSEKE  147 (266)
T ss_pred             EeCCCcch
Confidence            99998543

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=96.85  E-value=0.0043  Score=55.16  Aligned_cols=56  Identities=21%  Similarity=0.045  Sum_probs=44.6

Q ss_pred             cEEEEEecCCccccCcCC----C---CCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           21 KIVVFLDYDGTLSPIVED----P---DKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~----~---~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      .+++++|+||||......    +   .+..+.+.+.++|++|++.+ .++++|||+.......+
T Consensus       158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l  221 (300)
T PHA02530        158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTV  221 (300)
T ss_pred             CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHH
Confidence            578999999999974321    0   13467889999999999986 89999999998777654

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=96.85  E-value=0.0013  Score=53.66  Aligned_cols=57  Identities=19%  Similarity=0.114  Sum_probs=44.6

Q ss_pred             CcEEEEEecCCccccC-----cCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           20 KKIVVFLDYDGTLSPI-----VEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~-----~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      ..|+++||+||||++-     .+.......+.+--.+|+.|++.+ .++|+|+++...+...+
T Consensus         6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~~Gi~laIiT~k~~~~~~~~l   68 (169)
T TIGR02726         6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQLCGIDVAIITSKKSGAVRHRA   68 (169)
T ss_pred             cCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHHCCCEEEEEECCCcHHHHHHH
Confidence            3799999999999983     111123345667788999999885 89999999999888765

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=96.84  E-value=0.0016  Score=63.98  Aligned_cols=68  Identities=19%  Similarity=0.203  Sum_probs=52.5

Q ss_pred             EEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeC--Ch
Q 040896          193 VMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLR--DP  268 (288)
Q Consensus       193 ~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~~  268 (288)
                      +-+..|.   +|...++.+.++    ..   .|+++||+.||.++|+.+     +.|++|+++.+  +..|++++-  +.
T Consensus       489 ~a~~~Pe---dK~~~v~~lq~~----g~---~VamvGDG~NDapAL~~A-----dvGiAm~~gt~~akeaadivLldd~~  553 (675)
T TIGR01497       489 IAEATPE---DKIALIRQEQAE----GK---LVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAANMVDLDSDP  553 (675)
T ss_pred             EcCCCHH---HHHHHHHHHHHc----CC---eEEEECCCcchHHHHHhC-----CEeEEeCCCCHHHHHhCCEEECCCCH
Confidence            4455565   899999998764    23   799999999999999999     79999998765  468888864  35


Q ss_pred             hHHHHHH
Q 040896          269 DEVMSFL  275 (288)
Q Consensus       269 ~~v~~~l  275 (288)
                      ..+.+.+
T Consensus       554 s~Iv~av  560 (675)
T TIGR01497       554 TKLIEVV  560 (675)
T ss_pred             HHHHHHH
Confidence            5555544

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=96.81  E-value=0.0029  Score=51.52  Aligned_cols=47  Identities=26%  Similarity=0.044  Sum_probs=39.8

Q ss_pred             CCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCCh
Q 040896           19 GKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCL   69 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~   69 (288)
                      ...+++++|+||||+..    ....+.+.+.++|++|++.+ .++|+|+.+.
T Consensus        23 ~~v~~vv~D~Dgtl~~~----~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~   70 (170)
T TIGR01668        23 VGIKGVVLDKDNTLVYP----DHNEAYPALRDWIEELKAAGRKLLIVSNNAG   70 (170)
T ss_pred             CCCCEEEEecCCccccC----CCCCcChhHHHHHHHHHHcCCEEEEEeCCch
Confidence            46799999999999984    23367889999999999885 8999999984

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=96.80  E-value=0.0022  Score=55.25  Aligned_cols=46  Identities=15%  Similarity=0.043  Sum_probs=37.8

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhh
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDK   71 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~   71 (288)
                      +.++++||+||||.+      ...+-|.+.++|++|++.+ +++++|..+...
T Consensus         7 ~~~~~~~D~dG~l~~------~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~   53 (242)
T TIGR01459         7 DYDVFLLDLWGVIID------GNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNI   53 (242)
T ss_pred             cCCEEEEeccccccc------CCccCccHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence            457899999999998      2356789999999999986 899987766643

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=96.80  E-value=0.0018  Score=51.81  Aligned_cols=51  Identities=18%  Similarity=0.127  Sum_probs=38.9

Q ss_pred             EEEEecCCccccCcC------CCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHh
Q 040896           23 VVFLDYDGTLSPIVE------DPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVS   73 (288)
Q Consensus        23 li~~DlDGTL~~~~~------~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~   73 (288)
                      ++++|+|||++.++.      .-.....++...+..+++++++ +++-+|+||.....
T Consensus         1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~   58 (157)
T PF08235_consen    1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQAN   58 (157)
T ss_pred             CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHH
Confidence            489999999998531      1112256788899999999997 89999999985433

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=96.77  E-value=0.0018  Score=54.12  Aligned_cols=67  Identities=13%  Similarity=0.135  Sum_probs=46.8

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceE-EeCChhHHHHHHHHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALY-SLRDPDEVMSFLRRL  278 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~-~~~~~~~v~~~l~~~  278 (288)
                      ..|..+++.+..    .++   +++++|||.||++|.+.+     |.++.++....  ...+.+ ++++..++.++|.++
T Consensus       131 ~~k~~~l~~~~~----~~~---~~v~iGDs~~D~~~~~aa-----~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  198 (205)
T PRK13582        131 DGKRQAVKALKS----LGY---RVIAAGDSYNDTTMLGEA-----DAGILFRPPANVIAEFPQFPAVHTYDELLAAIDKA  198 (205)
T ss_pred             chHHHHHHHHHH----hCC---eEEEEeCCHHHHHHHHhC-----CCCEEECCCHHHHHhCCcccccCCHHHHHHHHHHH
Confidence            356666665432    234   899999999999999998     67776654322  124444 678999999888777


Q ss_pred             HH
Q 040896          279 AR  280 (288)
Q Consensus       279 ~~  280 (288)
                      ..
T Consensus       199 ~~  200 (205)
T PRK13582        199 SA  200 (205)
T ss_pred             Hh
Confidence            53

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=96.77  E-value=0.0053  Score=49.14  Aligned_cols=55  Identities=24%  Similarity=0.174  Sum_probs=47.0

Q ss_pred             cCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           18 KGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      +...+.+++|+|.||+..+    ....+|+.++=+.++++.+ .++|+|-.+...+..+.
T Consensus        25 ~~Gikgvi~DlDNTLv~wd----~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~   80 (175)
T COG2179          25 AHGIKGVILDLDNTLVPWD----NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAA   80 (175)
T ss_pred             HcCCcEEEEeccCceeccc----CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhh
Confidence            4578999999999999973    5568999999999999995 88999988888777664

>PLN02954 phosphoserine phosphatase

Probab=96.70  E-value=0.0042  Score=52.64  Aligned_cols=67  Identities=24%  Similarity=0.238  Sum_probs=47.6

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC----CccceEEeCChhHHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR----ETKALYSLRDPDEVMSFL  275 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~----~~~A~~~~~~~~~v~~~l  275 (288)
                      +..|..+++.++++++.+     ++++|||+.||+.|.+.+.   -.+.++.+....    ...|++++++..++.++|
T Consensus       153 ~~~K~~~i~~~~~~~~~~-----~~i~iGDs~~Di~aa~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~  223 (224)
T PLN02954        153 SGGKAEAVQHIKKKHGYK-----TMVMIGDGATDLEARKPGG---ADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL  223 (224)
T ss_pred             CccHHHHHHHHHHHcCCC-----ceEEEeCCHHHHHhhhcCC---CCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence            457999999999998864     8999999999999955531   023344443221    135889999888877654

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=96.69  E-value=0.0068  Score=49.16  Aligned_cols=48  Identities=21%  Similarity=0.135  Sum_probs=40.0

Q ss_pred             hhcCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc-C--CEEEEcCC
Q 040896           16 AAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF-F--PTAIVSGR   67 (288)
Q Consensus        16 ~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~-~--~v~i~TGR   67 (288)
                      ..+.+.|.++||+|+||+.+    ....++++..+.++++++. +  .|+|+|=.
T Consensus        36 Lk~~Gik~li~DkDNTL~~~----~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNs   86 (168)
T PF09419_consen   36 LKKKGIKALIFDKDNTLTPP----YEDEIPPEYAEWLNELKKQFGKDRVLIVSNS   86 (168)
T ss_pred             hhhcCceEEEEcCCCCCCCC----CcCcCCHHHHHHHHHHHHHCCCCeEEEEECC
Confidence            34667899999999999985    4667999999999999988 4  38888765

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]

Probab=96.65  E-value=5.8e-07  Score=87.99  Aligned_cols=94  Identities=37%  Similarity=0.429  Sum_probs=73.1

Q ss_pred             CCccchhhHHHHHHhhcCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhh----------
Q 040896            2 KHPSALDTFDRMVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDK----------   71 (288)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~----------   71 (288)
                      .||++.--||.+-..+.++..|.++|.||||-.+..++..++++-.++.+..+..+...-.+++||.+..          
T Consensus       170 flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid  249 (732)
T KOG1050|consen  170 FLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGID  249 (732)
T ss_pred             eccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccc
Confidence            4788888899988888888999999999999998877777777777777777777665566699999765          


Q ss_pred             HhhhcCCCCeEEEccCceeEeCCC
Q 040896           72 VSRFVQLKNVVYAGSHGMDISTPA   95 (288)
Q Consensus        72 l~~~~~~~~~~~i~~nGa~i~~~~   95 (288)
                      ..++..+...+.+++.|..+..+.
T Consensus       250 ~~r~v~~~~~~~~~~~~~ei~~~~  273 (732)
T KOG1050|consen  250 VQRFVKLLELPYVGSKGMEIKEPF  273 (732)
T ss_pred             hHHhhccccchhHHHHHHHHhhhc
Confidence            444444556778888888877653

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=96.64  E-value=0.0025  Score=61.77  Aligned_cols=61  Identities=18%  Similarity=0.157  Sum_probs=47.5

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeC--ChhHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLR--DPDEVMSFL  275 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~~~~v~~~l  275 (288)
                      +|...++.+.+    .+.   +++++||+.||++|++.+     |.+++++++.+  +..|++++.  +..++.+.+
T Consensus       435 ~K~~~v~~l~~----~~~---~v~~vGDg~nD~~al~~A-----~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i  499 (556)
T TIGR01525       435 DKLAIVKELQE----EGG---VVAMVGDGINDAPALAAA-----DVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAI  499 (556)
T ss_pred             HHHHHHHHHHH----cCC---EEEEEECChhHHHHHhhC-----CEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence            78877777765    334   899999999999999999     79999997654  247888876  466666654

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=96.63  E-value=0.0032  Score=51.53  Aligned_cols=57  Identities=16%  Similarity=0.056  Sum_probs=42.7

Q ss_pred             cEEEEEecCCccccCcCC-----------C----------CCCCCCHHHHHHHHHHhhcC-CEEEEcCC-ChhhHhhhcC
Q 040896           21 KIVVFLDYDGTLSPIVED-----------P----------DKAFMSDTMRMAVHEVAHFF-PTAIVSGR-CLDKVSRFVQ   77 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~-----------~----------~~~~i~~~~~~aL~~L~~~~-~v~i~TGR-~~~~l~~~~~   77 (288)
                      .+|++||+|+||.++.-.           +          ....+-+.+.+.|+.|++.+ +++++|++ +...+...+.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~   81 (174)
T TIGR01685         2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILG   81 (174)
T ss_pred             CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHH
Confidence            489999999999984200           0          12345678899999999886 89999988 7777666653

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=96.59  E-value=0.0041  Score=49.41  Aligned_cols=57  Identities=14%  Similarity=0.095  Sum_probs=43.1

Q ss_pred             CcEEEEEecCCccccCcC---CCC-CC-----------------CCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhc
Q 040896           20 KKIVVFLDYDGTLSPIVE---DPD-KA-----------------FMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~---~~~-~~-----------------~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~   76 (288)
                      +++++++||||||+....   .+. ..                 .+-|.+.+.|..|++...++|+|+.+...+...+
T Consensus         1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il   78 (148)
T smart00577        1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVL   78 (148)
T ss_pred             CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHH
Confidence            468899999999998521   110 01                 2357889999999865699999999999888765

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.51  E-value=0.0037  Score=61.77  Aligned_cols=69  Identities=22%  Similarity=0.120  Sum_probs=56.0

Q ss_pred             eEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeC--C
Q 040896          192 KVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLR--D  267 (288)
Q Consensus       192 ~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~  267 (288)
                      .+-|+.|.   +|...+++|.+.-    .   .|+.+||+-||-|.|..+     ..||+||.+.+  ...||.++-  +
T Consensus       579 v~AellPe---dK~~~V~~l~~~g----~---~VamVGDGINDAPALA~A-----dVGiAmG~GtDvA~eaADvvL~~~d  643 (713)
T COG2217         579 VRAELLPE---DKAEIVRELQAEG----R---KVAMVGDGINDAPALAAA-----DVGIAMGSGTDVAIEAADVVLMRDD  643 (713)
T ss_pred             heccCCcH---HHHHHHHHHHhcC----C---EEEEEeCCchhHHHHhhc-----CeeEeecCCcHHHHHhCCEEEecCC
Confidence            45788888   9999999998543    3   899999999999999999     69999999765  357888863  4


Q ss_pred             hhHHHHHH
Q 040896          268 PDEVMSFL  275 (288)
Q Consensus       268 ~~~v~~~l  275 (288)
                      ...+.+.+
T Consensus       644 L~~v~~ai  651 (713)
T COG2217         644 LSAVPEAI  651 (713)
T ss_pred             HHHHHHHH
Confidence            66666655

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=96.47  E-value=0.0022  Score=52.64  Aligned_cols=64  Identities=20%  Similarity=0.243  Sum_probs=46.1

Q ss_pred             HHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCC-----Cccc--eEEeCChhHHHHHHH
Q 040896          205 GRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPR-----ETKA--LYSLRDPDEVMSFLR  276 (288)
Q Consensus       205 g~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~-----~~~A--~~~~~~~~~v~~~l~  276 (288)
                      ......+++.++++++   ++++|||+.+|+.+-+.+     |+ ++.+..+..     ...+  ++++++..++.++|.
T Consensus       106 p~~~~~~~~~l~~~~~---~~~~VgDs~~Di~~A~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~  177 (181)
T PRK08942        106 PGMLLSIAERLNIDLA---GSPMVGDSLRDLQAAAAA-----GVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK  177 (181)
T ss_pred             HHHHHHHHHHcCCChh---hEEEEeCCHHHHHHHHHC-----CCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence            4567778888898877   999999999999888777     53 455544321     1235  788888887776654

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=96.44  E-value=0.0046  Score=47.41  Aligned_cols=57  Identities=18%  Similarity=0.247  Sum_probs=41.1

Q ss_pred             HhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEE-ec--CCCC--ccceEEeCChhHHHHHHHH
Q 040896          213 DTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV-SS--VPRE--TKALYSLRDPDEVMSFLRR  277 (288)
Q Consensus       213 ~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v-~n--a~~~--~~A~~~~~~~~~v~~~l~~  277 (288)
                      +.++-+.+   .++++||+.||+.||..+     ..||++ ++  ++.+  ..|++++.+..++...+..
T Consensus        87 ~eLkk~~~---k~vmVGnGaND~laLr~A-----DlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~  148 (152)
T COG4087          87 RELKKRYE---KVVMVGNGANDILALREA-----DLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD  148 (152)
T ss_pred             HHhcCCCc---EEEEecCCcchHHHhhhc-----ccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence            33433445   999999999999999999     477555 33  2333  3788998888888777653

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=96.44  E-value=0.0058  Score=62.31  Aligned_cols=62  Identities=18%  Similarity=0.240  Sum_probs=50.5

Q ss_pred             ceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCC
Q 040896          191 KKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRD  267 (288)
Q Consensus       191 ~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~  267 (288)
                      ..+-.+.|.   .|..-|+.+.++    ++   .|..+||+.||.++|+.+     ..||+|+++.+  +..|+.++.+
T Consensus       581 ~vfAr~~Pe---~K~~iV~~lq~~----G~---vVam~GDGvNDapALk~A-----dVGIAmg~gtdvAk~aADiVLld  644 (867)
T TIGR01524       581 HIFARLTPM---QKSRIIGLLKKA----GH---TVGFLGDGINDAPALRKA-----DVGISVDTAADIAKEASDIILLE  644 (867)
T ss_pred             eEEEECCHH---HHHHHHHHHHhC----CC---EEEEECCCcccHHHHHhC-----CEEEEeCCccHHHHHhCCEEEec
Confidence            355667777   999999998764    33   899999999999999999     69999998765  4689988753

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>PLN02954 phosphoserine phosphatase

Probab=96.43  E-value=0.0054  Score=51.94  Aligned_cols=33  Identities=15%  Similarity=0.102  Sum_probs=26.3

Q ss_pred             CCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           44 MSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        44 i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      +.|...+.|+.|++.+ +++|+||.+...+...+
T Consensus        85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l  118 (224)
T PLN02954         85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVA  118 (224)
T ss_pred             CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHH
Confidence            4577788888888875 89999999988777654

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=96.37  E-value=0.0037  Score=62.65  Aligned_cols=66  Identities=23%  Similarity=0.189  Sum_probs=50.0

Q ss_pred             EEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeC--Chh
Q 040896          194 MEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLR--DPD  269 (288)
Q Consensus       194 ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~--~~~  269 (288)
                      .+..|.   +|...++.+.+.     .   .|+++||+.||.++|+.+     +.||+|+++.+.  ..|++++.  +..
T Consensus       611 ~~~~p~---~K~~~v~~l~~~-----~---~v~mvGDgiNDapAl~~A-----~vgia~g~~~~~a~~~adivl~~~~l~  674 (741)
T PRK11033        611 AGLLPE---DKVKAVTELNQH-----A---PLAMVGDGINDAPAMKAA-----SIGIAMGSGTDVALETADAALTHNRLR  674 (741)
T ss_pred             cCCCHH---HHHHHHHHHhcC-----C---CEEEEECCHHhHHHHHhC-----CeeEEecCCCHHHHHhCCEEEecCCHH
Confidence            445555   899988887632     3   899999999999999999     799999988653  46888764  455


Q ss_pred             HHHHHH
Q 040896          270 EVMSFL  275 (288)
Q Consensus       270 ~v~~~l  275 (288)
                      ++...+
T Consensus       675 ~l~~~i  680 (741)
T PRK11033        675 GLAQMI  680 (741)
T ss_pred             HHHHHH
Confidence            555444

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=96.36  E-value=0.0046  Score=64.22  Aligned_cols=68  Identities=18%  Similarity=0.219  Sum_probs=51.0

Q ss_pred             EEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEe-cCCC--CccceEEeCC--
Q 040896          193 VMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVS-SVPR--ETKALYSLRD--  267 (288)
Q Consensus       193 ~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~-na~~--~~~A~~~~~~--  267 (288)
                      +-.+.|.   .|..-|+.+.+.    +.   .|.++||+.||.+||+.+     ..||+|| ++.+  +..|++++.+  
T Consensus       726 ~ar~sP~---~K~~iV~~lq~~----g~---~Vam~GDGvNDapaLk~A-----dVGIAmg~~gt~vak~aADivl~dd~  790 (1053)
T TIGR01523       726 IARCAPQ---TKVKMIEALHRR----KA---FCAMTGDGVNDSPSLKMA-----NVGIAMGINGSDVAKDASDIVLSDDN  790 (1053)
T ss_pred             EEecCHH---HHHHHHHHHHhc----CC---eeEEeCCCcchHHHHHhC-----CccEecCCCccHHHHHhcCEEEecCC
Confidence            4555566   888888888765    33   789999999999999999     6999998 5554  4689998864  


Q ss_pred             hhHHHHHH
Q 040896          268 PDEVMSFL  275 (288)
Q Consensus       268 ~~~v~~~l  275 (288)
                      -..+.+.+
T Consensus       791 f~~I~~~i  798 (1053)
T TIGR01523       791 FASILNAI  798 (1053)
T ss_pred             HHHHHHHH
Confidence            44444443

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=96.30  E-value=0.0098  Score=52.28  Aligned_cols=68  Identities=19%  Similarity=0.214  Sum_probs=53.1

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCC--C----CccceEEeCChhHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVP--R----ETKALYSLRDPDEVMS  273 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~--~----~~~A~~~~~~~~~v~~  273 (288)
                      +-.+...++.+++.+|++++   ++++|||+.||+.+.+.+     |+ ++.|.++.  .    +..+++++++..++..
T Consensus       156 ~Kp~p~~~~~~~~~~g~~~~---~~l~IGD~~~Di~aA~~a-----Gi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~  227 (272)
T PRK13223        156 KKPDPAALLFVMKMAGVPPS---QSLFVGDSRSDVLAAKAA-----GVQCVALSYGYNHGRPIAEESPALVIDDLRALLP  227 (272)
T ss_pred             CCCCcHHHHHHHHHhCCChh---HEEEECCCHHHHHHHHHC-----CCeEEEEecCCCCchhhhhcCCCEEECCHHHHHH
Confidence            45678899999999999887   999999999999998888     54 56665542  1    2368888988888776


Q ss_pred             HHH
Q 040896          274 FLR  276 (288)
Q Consensus       274 ~l~  276 (288)
                      ++.
T Consensus       228 ~~~  230 (272)
T PRK13223        228 GCA  230 (272)
T ss_pred             HHh
Confidence            544

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=96.30  E-value=0.0073  Score=50.95  Aligned_cols=34  Identities=12%  Similarity=-0.009  Sum_probs=24.1

Q ss_pred             CCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           43 FMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        43 ~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      .+.+.+.+.|++|++.+ +++|+||.+...+...+
T Consensus        85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l  119 (219)
T TIGR00338        85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVK  119 (219)
T ss_pred             CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH
Confidence            34566777888888774 78888888776655543

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=96.28  E-value=0.012  Score=51.76  Aligned_cols=72  Identities=25%  Similarity=0.374  Sum_probs=56.4

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCC--C----CccceEEeCChhHHHHHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVP--R----ETKALYSLRDPDEVMSFL  275 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~--~----~~~A~~~~~~~~~v~~~l  275 (288)
                      ..|..++..++++++++++   ++++|||+.+|+.+-+.+.    -.+|.+..+.  .    ...|++++.+..++..++
T Consensus       195 ~~k~~~~~~~l~~~~~~p~---~~l~IGDs~~Di~aA~~AG----~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~  267 (273)
T PRK13225        195 LSKRRALSQLVAREGWQPA---AVMYVGDETRDVEAARQVG----LIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAV  267 (273)
T ss_pred             CCCHHHHHHHHHHhCcChh---HEEEECCCHHHHHHHHHCC----CeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHH
Confidence            3577899999999999877   9999999999999888872    2455555442  1    236899999999999988


Q ss_pred             HHHHH
Q 040896          276 RRLAR  280 (288)
Q Consensus       276 ~~~~~  280 (288)
                      .++++
T Consensus       268 ~~~~~  272 (273)
T PRK13225        268 TQLMR  272 (273)
T ss_pred             HHHhc
Confidence            88764

>PRK06769 hypothetical protein; Validated

Probab=96.24  E-value=0.0041  Score=50.81  Aligned_cols=49  Identities=12%  Similarity=0.145  Sum_probs=36.5

Q ss_pred             CcEEEEEecCCccccCcC--CCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCC
Q 040896           20 KKIVVFLDYDGTLSPIVE--DPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRC   68 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~--~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~   68 (288)
                      ..++|++|.||||-.+..  .+..-.+-|.+.+.|++|++.+ +++|+|+.+
T Consensus         3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~   54 (173)
T PRK06769          3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQP   54 (173)
T ss_pred             CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCc
Confidence            578999999999965421  0113345688999999999885 888888765

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=96.24  E-value=0.0063  Score=60.00  Aligned_cols=68  Identities=16%  Similarity=0.175  Sum_probs=53.2

Q ss_pred             EEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeC--Ch
Q 040896          193 VMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLR--DP  268 (288)
Q Consensus       193 ~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~~  268 (288)
                      +-+..|.   +|..-|+.+.++    ++   .|...||+.||-|+|+.+     ..||+|+++.+  +..|+.++-  +.
T Consensus       488 ~A~~~Pe---dK~~iV~~lQ~~----G~---~VaMtGDGvNDAPALa~A-----DVGIAMgsGTdvAkeAADiVLldd~~  552 (679)
T PRK01122        488 LAEATPE---DKLALIRQEQAE----GR---LVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAGNMVDLDSNP  552 (679)
T ss_pred             EccCCHH---HHHHHHHHHHHc----CC---eEEEECCCcchHHHHHhC-----CEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence            4566677   899999998765    33   789999999999999999     69999998866  468998874  35


Q ss_pred             hHHHHHH
Q 040896          269 DEVMSFL  275 (288)
Q Consensus       269 ~~v~~~l  275 (288)
                      ..+.+.+
T Consensus       553 s~Iv~av  559 (679)
T PRK01122        553 TKLIEVV  559 (679)
T ss_pred             HHHHHHH
Confidence            5555444

>PTZ00445 p36-lilke protein; Provisional

Probab=96.20  E-value=0.012  Score=49.26  Aligned_cols=58  Identities=10%  Similarity=0.011  Sum_probs=41.1

Q ss_pred             HHHhh-cCCcEEEEEecCCcccc-CcCCCCCC---------CCCHHHHHHHHHHhhcC-CEEEEcCCChh
Q 040896           13 MVAAA-KGKKIVVFLDYDGTLSP-IVEDPDKA---------FMSDTMRMAVHEVAHFF-PTAIVSGRCLD   70 (288)
Q Consensus        13 ~~~~~-~~~~~li~~DlDGTL~~-~~~~~~~~---------~i~~~~~~aL~~L~~~~-~v~i~TGR~~~   70 (288)
                      ++... ..+.|+|++|+|.||+. |.....+.         .++|+....+.+|++.+ +|+|+|=-.-.
T Consensus        34 ~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~  103 (219)
T PTZ00445         34 FVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKE  103 (219)
T ss_pred             HHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchh
Confidence            33443 56799999999999998 21111122         26889999999999874 89999965543

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=96.20  E-value=0.0078  Score=61.59  Aligned_cols=69  Identities=17%  Similarity=0.180  Sum_probs=50.3

Q ss_pred             eEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEec-CCC--CccceEEeC--
Q 040896          192 KVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSS-VPR--ETKALYSLR--  266 (288)
Q Consensus       192 ~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~n-a~~--~~~A~~~~~--  266 (288)
                      .+-...|.   .|..-++.+.+.    ++   .|.++||+.||.+|++.+     +.||+||+ +.+  +..|++++.  
T Consensus       597 Vfar~~P~---~K~~iv~~lq~~----g~---~v~mvGDGvND~pAl~~A-----dVGia~g~~g~~va~~aaDivl~dd  661 (884)
T TIGR01522       597 VFARASPE---HKMKIVKALQKR----GD---VVAMTGDGVNDAPALKLA-----DIGVAMGQTGTDVAKEAADMILTDD  661 (884)
T ss_pred             EEEECCHH---HHHHHHHHHHHC----CC---EEEEECCCcccHHHHHhC-----CeeEecCCCcCHHHHHhcCEEEcCC
Confidence            34445555   787777776653    34   899999999999999999     79999984 443  357899984  


Q ss_pred             ChhHHHHHH
Q 040896          267 DPDEVMSFL  275 (288)
Q Consensus       267 ~~~~v~~~l  275 (288)
                      +...+.+.+
T Consensus       662 ~~~~i~~~i  670 (884)
T TIGR01522       662 DFATILSAI  670 (884)
T ss_pred             CHHHHHHHH
Confidence            355555544

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=96.13  E-value=0.01  Score=60.78  Aligned_cols=62  Identities=19%  Similarity=0.231  Sum_probs=51.3

Q ss_pred             ceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCC
Q 040896          191 KKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRD  267 (288)
Q Consensus       191 ~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~  267 (288)
                      ..|-.+.|.   +|..-|+.+.++    +.   .|...||+.||.++|+.+     ..||+|+++.+  +..|+.++.+
T Consensus       616 ~VfAr~sPe---~K~~IV~~Lq~~----G~---vVam~GDGvNDaPALk~A-----DVGIAmg~gtdvAkeaADiVLld  679 (902)
T PRK10517        616 TLFARLTPM---HKERIVTLLKRE----GH---VVGFMGDGINDAPALRAA-----DIGISVDGAVDIAREAADIILLE  679 (902)
T ss_pred             cEEEEcCHH---HHHHHHHHHHHC----CC---EEEEECCCcchHHHHHhC-----CEEEEeCCcCHHHHHhCCEEEec
Confidence            456677787   999999988764    33   889999999999999999     69999998865  4689998753

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=96.12  E-value=0.03  Score=47.12  Aligned_cols=57  Identities=19%  Similarity=0.229  Sum_probs=39.8

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEE-ecCCCCccce
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV-SSVPRETKAL  262 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v-~na~~~~~A~  262 (288)
                      |--|..-++.+++.-+++-    .++++|||..|.+||+.++..| |.+|+- ||-..-..|+
T Consensus       189 gg~ka~i~e~~~ele~~d~----sa~~VGDSItDv~ml~~~rgrG-glAvaFNGNeYal~eAd  246 (315)
T COG4030         189 GGEKAKIMEGYCELEGIDF----SAVVVGDSITDVKMLEAARGRG-GLAVAFNGNEYALKEAD  246 (315)
T ss_pred             CcchhHHHHHHHhhcCCCc----ceeEecCcccchHHHHHhhccC-ceEEEecCCcccccccc
Confidence            5566777777777767653    5799999999999999998654 566554 4433223444

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=96.11  E-value=0.011  Score=60.51  Aligned_cols=62  Identities=23%  Similarity=0.237  Sum_probs=51.7

Q ss_pred             ceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCC
Q 040896          191 KKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRD  267 (288)
Q Consensus       191 ~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~  267 (288)
                      ..|-.+.|.   .|..-|+.|.++    ++   .|...||+.||.|+|+.+     ..||+||++.+  +..|+.++-+
T Consensus       616 ~VfAr~sPe---~K~~iV~~Lq~~----G~---vVamtGDGvNDaPALk~A-----DVGIAmg~gtdvAkeaADiVLld  679 (903)
T PRK15122        616 TVFAKLTPL---QKSRVLKALQAN----GH---TVGFLGDGINDAPALRDA-----DVGISVDSGADIAKESADIILLE  679 (903)
T ss_pred             CEEEEeCHH---HHHHHHHHHHhC----CC---EEEEECCCchhHHHHHhC-----CEEEEeCcccHHHHHhcCEEEec
Confidence            467778888   999999998764    33   889999999999999999     69999998765  5689998753

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=96.09  E-value=0.011  Score=50.09  Aligned_cols=69  Identities=17%  Similarity=0.087  Sum_probs=48.5

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCC----CCccceEEeCChhHHHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVP----RETKALYSLRDPDEVMSFLR  276 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~----~~~~A~~~~~~~~~v~~~l~  276 (288)
                      |..|..+++.    ++...+   +++++|||.||+.|.+.+     |..++-+.-.    ....+.+..++..++.+.|+
T Consensus       146 ~~~K~~~l~~----~~~~~~---~~i~iGDs~~Di~aa~~A-----g~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~l~  213 (219)
T PRK09552        146 GCCKPSLIRK----LSDTND---FHIVIGDSITDLEAAKQA-----DKVFARDFLITKCEELGIPYTPFETFHDVQTELK  213 (219)
T ss_pred             CCchHHHHHH----hccCCC---CEEEEeCCHHHHHHHHHC-----CcceeHHHHHHHHHHcCCCccccCCHHHHHHHHH
Confidence            3468876665    455555   899999999999999887     6755522101    12356566688999999998


Q ss_pred             HHHHH
Q 040896          277 RLARW  281 (288)
Q Consensus       277 ~~~~~  281 (288)
                      ++.+.
T Consensus       214 ~~~~~  218 (219)
T PRK09552        214 HLLEV  218 (219)
T ss_pred             HHhcc
Confidence            88754

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=96.05  E-value=0.017  Score=55.40  Aligned_cols=52  Identities=19%  Similarity=0.192  Sum_probs=38.5

Q ss_pred             cCCcEEEEEecCCccccCcC------CCCCCC-CCHHHHHHHHHHhhcC-CEEEEcCCCh
Q 040896           18 KGKKIVVFLDYDGTLSPIVE------DPDKAF-MSDTMRMAVHEVAHFF-PTAIVSGRCL   69 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~~~~------~~~~~~-i~~~~~~aL~~L~~~~-~v~i~TGR~~   69 (288)
                      ..+.|++|||+||||.....      ++++-+ +.+.+.++|++|++.+ .++|+|..+-
T Consensus       165 ~~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g  224 (526)
T TIGR01663       165 KGQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGG  224 (526)
T ss_pred             CccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence            35679999999999996321      111212 4678899999999996 8999998655

Note that the EC number for the kinase function is: 2.7.1.78

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=96.04  E-value=0.0076  Score=48.31  Aligned_cols=55  Identities=15%  Similarity=0.192  Sum_probs=39.0

Q ss_pred             EEEEEecCCccccCcCCCCC--------------CCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhc
Q 040896           22 IVVFLDYDGTLSPIVEDPDK--------------AFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~~~--------------~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~   76 (288)
                      |++++||||||+.....+..              -.+.|.+.+.|+.+.+...++|.|..+...+...+
T Consensus         1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~   69 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVL   69 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHH
T ss_pred             CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHH
Confidence            68999999999985432111              12568899999999877899999999988777764

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=96.02  E-value=0.0057  Score=59.05  Aligned_cols=62  Identities=19%  Similarity=0.207  Sum_probs=44.0

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC-ccceEEeCChhHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE-TKALYSLRDPDEVMS  273 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~-~~A~~~~~~~~~v~~  273 (288)
                      -|+.-++.|.++-+ .     .|.|+||+.||++|++.++-   |.||-=..+.+. -+|+|.++--.-|.+
T Consensus       768 QKA~v~~llq~~t~-k-----rvc~IGDGGNDVsMIq~A~~---GiGI~gkEGkQASLAADfSItqF~Hv~r  830 (1051)
T KOG0210|consen  768 QKAQVVRLLQKKTG-K-----RVCAIGDGGNDVSMIQAADV---GIGIVGKEGKQASLAADFSITQFSHVSR  830 (1051)
T ss_pred             HHHHHHHHHHHhhC-c-----eEEEEcCCCccchheeeccc---ceeeecccccccchhccccHHHHHHHHH
Confidence            78888888888777 2     99999999999999999963   777743323333 378877653333333

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=95.98  E-value=0.0074  Score=51.16  Aligned_cols=15  Identities=40%  Similarity=0.786  Sum_probs=13.2

Q ss_pred             cEEEEEecCCccccC
Q 040896           21 KIVVFLDYDGTLSPI   35 (288)
Q Consensus        21 ~~li~~DlDGTL~~~   35 (288)
                      +++++||+||||+..
T Consensus         3 ~~~vifDfDgTi~~~   17 (219)
T PRK09552          3 SIQIFCDFDGTITNN   17 (219)
T ss_pred             CcEEEEcCCCCCCcc
Confidence            469999999999983

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=95.97  E-value=0.0097  Score=61.31  Aligned_cols=69  Identities=19%  Similarity=0.167  Sum_probs=53.2

Q ss_pred             eEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEe-cCCC--CccceEEeCC-
Q 040896          192 KVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVS-SVPR--ETKALYSLRD-  267 (288)
Q Consensus       192 ~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~-na~~--~~~A~~~~~~-  267 (288)
                      .+-.+.|.   .|..-|+.+.++    +.   .|..+||+.||.++|+.+     ..||+|| ++.+  +..|++++.+ 
T Consensus       648 Vfar~sPe---~K~~iV~~lq~~----g~---vVam~GDGvNDapALk~A-----dVGIAmg~~gtdvAk~aADivL~dd  712 (941)
T TIGR01517       648 VLARSSPL---DKQLLVLMLKDM----GE---VVAVTGDGTNDAPALKLA-----DVGFSMGISGTEVAKEASDIILLDD  712 (941)
T ss_pred             EEEECCHH---HHHHHHHHHHHC----CC---EEEEECCCCchHHHHHhC-----CcceecCCCccHHHHHhCCEEEecC
Confidence            45677777   999999998764    33   889999999999999999     5999999 6655  4688998863 


Q ss_pred             -hhHHHHHH
Q 040896          268 -PDEVMSFL  275 (288)
Q Consensus       268 -~~~v~~~l  275 (288)
                       -..+.+.+
T Consensus       713 ~f~~I~~~i  721 (941)
T TIGR01517       713 NFASIVRAV  721 (941)
T ss_pred             CHHHHHHHH
Confidence             34444444

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=95.95  E-value=0.0088  Score=61.97  Aligned_cols=61  Identities=21%  Similarity=0.154  Sum_probs=46.7

Q ss_pred             eEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecC-CC--CccceEEeCC
Q 040896          192 KVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSV-PR--ETKALYSLRD  267 (288)
Q Consensus       192 ~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na-~~--~~~A~~~~~~  267 (288)
                      .+-.+.|.   .|..-|+.+.+. |   .   .|.++||+.||.+||+.+     ..||+||+. .+  +.+|++++.+
T Consensus       663 VfaR~sPe---qK~~IV~~lq~~-g---~---vv~~~GDG~ND~paLk~A-----dVGiamg~~G~~vak~aADivL~d  726 (997)
T TIGR01106       663 VFARTSPQ---QKLIIVEGCQRQ-G---A---IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDVSKQAADMILLD  726 (997)
T ss_pred             EEEECCHH---HHHHHHHHHHHC-C---C---EEEEECCCcccHHHHhhC-----CcceecCCcccHHHHHhhceEEec
Confidence            34455555   788888777653 3   3   789999999999999999     699999964 43  4688999864

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=95.93  E-value=0.0097  Score=58.66  Aligned_cols=68  Identities=19%  Similarity=0.193  Sum_probs=52.6

Q ss_pred             EEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeC--Ch
Q 040896          193 VMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLR--DP  268 (288)
Q Consensus       193 ~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~~  268 (288)
                      +-++.|.   +|..-++.+.++    ++   .|...||+.||.|.|+.+     ..||+|+++.+  +..|+.++-  +.
T Consensus       484 ~A~~~Pe---dK~~iV~~lQ~~----G~---~VaMtGDGvNDAPALa~A-----DVGIAMgsGTdvAkeAADiVLldd~l  548 (673)
T PRK14010        484 VAECKPE---DKINVIREEQAK----GH---IVAMTGDGTNDAPALAEA-----NVGLAMNSGTMSAKEAANLIDLDSNP  548 (673)
T ss_pred             EcCCCHH---HHHHHHHHHHhC----CC---EEEEECCChhhHHHHHhC-----CEEEEeCCCCHHHHHhCCEEEcCCCH
Confidence            4566676   899999988764    33   788999999999999999     69999998866  468998875  34


Q ss_pred             hHHHHHH
Q 040896          269 DEVMSFL  275 (288)
Q Consensus       269 ~~v~~~l  275 (288)
                      ..+.+.+
T Consensus       549 s~Iv~av  555 (673)
T PRK14010        549 TKLMEVV  555 (673)
T ss_pred             HHHHHHH
Confidence            4444444

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=95.93  E-value=0.015  Score=52.43  Aligned_cols=46  Identities=15%  Similarity=0.056  Sum_probs=34.4

Q ss_pred             EEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc----C-CEEEEc---CCChhhHhh
Q 040896           23 VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF----F-PTAIVS---GRCLDKVSR   74 (288)
Q Consensus        23 li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~----~-~v~i~T---GR~~~~l~~   74 (288)
                      .++||+||||..      ...+-+...++|+.|...    + ++.++|   |++......
T Consensus         2 ~~ifD~DGvL~~------g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~   55 (321)
T TIGR01456         2 GFAFDIDGVLFR------GKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAE   55 (321)
T ss_pred             EEEEeCcCceEC------CccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHH
Confidence            589999999998      234578899999999985    4 666655   666655333

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=95.92  E-value=0.0063  Score=49.15  Aligned_cols=36  Identities=28%  Similarity=0.235  Sum_probs=30.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      -|...+..+++.++++++   +++++||+.+|+.+-+.+
T Consensus       104 P~~~~~~~~~~~~~~~~~---e~l~IGD~~~Di~~A~~a  139 (161)
T TIGR01261       104 PKIKLLEPYLKKNLIDKA---RSYVIGDRETDMQLAENL  139 (161)
T ss_pred             CCHHHHHHHHHHcCCCHH---HeEEEeCCHHHHHHHHHC
Confidence            456778888888888877   999999999999987777

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=95.89  E-value=0.021  Score=48.71  Aligned_cols=65  Identities=17%  Similarity=0.116  Sum_probs=49.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCC---C----CccceEEeCChhHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVP---R----ETKALYSLRDPDEVMSF  274 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~---~----~~~A~~~~~~~~~v~~~  274 (288)
                      -+...+..+++++|++++   ++++|||+.+|+.+-+.+     |+ ++.+.-+.   .    ...+++++++..++.+.
T Consensus       152 P~p~~~~~~~~~l~~~p~---~~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~  223 (229)
T PRK13226        152 PHPLPLLVAAERIGVAPT---DCVYVGDDERDILAARAA-----GMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNP  223 (229)
T ss_pred             CCHHHHHHHHHHhCCChh---hEEEeCCCHHHHHHHHHC-----CCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence            456779999999999888   999999999999998888     54 34443321   1    12488999999988776


Q ss_pred             H
Q 040896          275 L  275 (288)
Q Consensus       275 l  275 (288)
                      +
T Consensus       224 ~  224 (229)
T PRK13226        224 A  224 (229)
T ss_pred             h
Confidence            5

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=95.88  E-value=0.017  Score=47.72  Aligned_cols=31  Identities=26%  Similarity=0.124  Sum_probs=21.8

Q ss_pred             HHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           46 DTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        46 ~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      +.+.+.|+.|++++ +++|+|+.....+...+
T Consensus        83 ~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l  114 (201)
T TIGR01491        83 DYAEELVRWLKEKGLKTAIVSGGIMCLAKKVA  114 (201)
T ss_pred             ccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH
Confidence            34466677777764 78888888877766654

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01686 FkbH FkbH-like domain

Probab=95.86  E-value=0.019  Score=51.73  Aligned_cols=57  Identities=21%  Similarity=0.133  Sum_probs=43.6

Q ss_pred             CcEEEEEecCCccccCcCCCC------CCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           20 KKIVVFLDYDGTLSPIVEDPD------KAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~------~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      .+|+|++|+|+||..-...+.      -....+...++|++|++.+ .++|||..+...+...+
T Consensus         2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l   65 (320)
T TIGR01686         2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVF   65 (320)
T ss_pred             CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Confidence            369999999999997321111      1123578999999999996 89999999998887765

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=95.86  E-value=0.017  Score=58.07  Aligned_cols=61  Identities=25%  Similarity=0.215  Sum_probs=50.0

Q ss_pred             eEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCC
Q 040896          192 KVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRD  267 (288)
Q Consensus       192 ~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~  267 (288)
                      .|-.+.|.   .|..-|+.+.+.    +.   .|..+||+.||.+.|+.+     ..||+|+++.+  +..|+.++-+
T Consensus       514 vfAr~~Pe---~K~~iV~~lq~~----G~---~VamvGDGvNDapAL~~A-----dVGIAm~~gtdvAkeaADivLl~  576 (755)
T TIGR01647       514 GFAEVFPE---HKYEIVEILQKR----GH---LVGMTGDGVNDAPALKKA-----DVGIAVAGATDAARSAADIVLTE  576 (755)
T ss_pred             EEEecCHH---HHHHHHHHHHhc----CC---EEEEEcCCcccHHHHHhC-----CeeEEecCCcHHHHHhCCEEEEc
Confidence            56777887   899988887653    33   899999999999999999     69999998765  4689988753

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=95.85  E-value=0.0086  Score=49.16  Aligned_cols=33  Identities=24%  Similarity=0.303  Sum_probs=27.9

Q ss_pred             CHHHHHHHH---HHhcCCCCCCCceeEEEcCCcccHHHHH
Q 040896          203 DKGRALEYL---LDTFGFNNASDFLPLYIGDDKTDEDAFK  239 (288)
Q Consensus       203 sKg~al~~l---~~~~~~~~~~~~~vv~~GDs~ND~~Ml~  239 (288)
                      +|..+++.+   ... +....   .++++|||.||++||+
T Consensus       157 ~K~~~l~~~~~~~~~-~~~~~---~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  157 GKAEALKELYIRDEE-DIDPD---RVIAIGDSINDLPMLR  192 (192)
T ss_dssp             HHHHHHHHHHHHHHH-THTCC---EEEEEESSGGGHHHHH
T ss_pred             cHHHHHHHHHHHhhc-CCCCC---eEEEEECCHHHHHHhC
Confidence            499999999   444 55555   9999999999999986

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=95.79  E-value=0.038  Score=46.44  Aligned_cols=69  Identities=19%  Similarity=0.166  Sum_probs=53.2

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCC--C----CccceEEeCChhHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVP--R----ETKALYSLRDPDEVMS  273 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~--~----~~~A~~~~~~~~~v~~  273 (288)
                      +--|...+++++++++++++   ++++|||+.+|+.+-+.+     |. ++.+..+.  +    +..+++++++..++.+
T Consensus       137 ~Kp~p~~~~~~~~~~~~~~~---~~~~iGDs~~Di~aa~~a-----G~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~  208 (214)
T PRK13288        137 AKPDPEPVLKALELLGAKPE---EALMVGDNHHDILAGKNA-----GTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLA  208 (214)
T ss_pred             CCCCcHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHH
Confidence            34678899999999999877   999999999999988888     54 45554432  1    1258889999998888


Q ss_pred             HHHH
Q 040896          274 FLRR  277 (288)
Q Consensus       274 ~l~~  277 (288)
                      ++..
T Consensus       209 ~i~~  212 (214)
T PRK13288        209 IVGD  212 (214)
T ss_pred             HHhh
Confidence            7654

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=95.79  E-value=0.019  Score=47.95  Aligned_cols=66  Identities=15%  Similarity=0.209  Sum_probs=50.5

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecC--CC----CccceEEeCChhHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSV--PR----ETKALYSLRDPDEVMSFL  275 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na--~~----~~~A~~~~~~~~~v~~~l  275 (288)
                      -|...++.+++.++++++   ++++|||+.+|+.+-+.+     |. ++.+..+  ..    +..|++++++..++..++
T Consensus       132 P~~~~~~~~~~~~~~~~~---~~l~igD~~~Di~aA~~~-----Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~  203 (205)
T TIGR01454       132 PAPDIVREALRLLDVPPE---DAVMVGDAVTDLASARAA-----GTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC  203 (205)
T ss_pred             CChHHHHHHHHHcCCChh---heEEEcCCHHHHHHHHHc-----CCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence            567889999999999887   999999999999988887     54 3444322  22    246889999998887665


Q ss_pred             H
Q 040896          276 R  276 (288)
Q Consensus       276 ~  276 (288)
                      +
T Consensus       204 ~  204 (205)
T TIGR01454       204 R  204 (205)
T ss_pred             h
Confidence            3

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=95.78  E-value=0.018  Score=48.21  Aligned_cols=64  Identities=14%  Similarity=0.193  Sum_probs=48.7

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEec--CCC----CccceEEeCChhHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSS--VPR----ETKALYSLRDPDEVMSF  274 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~n--a~~----~~~A~~~~~~~~~v~~~  274 (288)
                      -+...+..++++++++++   ++++|||+.+|+.+.+.+     |+ ++.+.-  ...    ...|++++++..++..+
T Consensus       142 p~p~~~~~~~~~~~~~~~---~~~~igDs~~d~~aa~~a-----G~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~  212 (213)
T TIGR01449       142 PHPDPLLLAAERLGVAPQ---QMVYVGDSRVDIQAARAA-----GCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL  212 (213)
T ss_pred             CChHHHHHHHHHcCCChh---HeEEeCCCHHHHHHHHHC-----CCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence            456789999999999887   999999999999999998     54 444522  211    23688888888887653

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=95.73  E-value=0.013  Score=51.17  Aligned_cols=49  Identities=18%  Similarity=0.136  Sum_probs=37.1

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcC---CChhhHhh
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSG---RCLDKVSR   74 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TG---R~~~~l~~   74 (288)
                      +.+.++||+||||..      ....-|...++|++|++++ +++++|=   |++..+.+
T Consensus         7 ~y~~~l~DlDGvl~~------G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~   59 (269)
T COG0647           7 KYDGFLFDLDGVLYR------GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAA   59 (269)
T ss_pred             hcCEEEEcCcCceEe------CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Confidence            356799999999998      3456678999999999995 8888764   44443443

>PRK08238 hypothetical protein; Validated

Probab=95.69  E-value=0.025  Score=53.74  Aligned_cols=46  Identities=7%  Similarity=-0.150  Sum_probs=35.0

Q ss_pred             CCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCce
Q 040896           43 FMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGM   89 (288)
Q Consensus        43 ~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa   89 (288)
                      .+.+...+.|+++++++ +++++|+++...+.+..   ++. ..++|.++.
T Consensus        72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF-d~Vigsd~~  121 (479)
T PRK08238         72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF-DGVFASDGT  121 (479)
T ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-CEEEeCCCc
Confidence            35588999999999996 89999999998877653   442 346666654

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=95.65  E-value=0.018  Score=48.59  Aligned_cols=66  Identities=20%  Similarity=0.098  Sum_probs=45.2

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCC----CCccceEEeCChhHHHHHHHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVP----RETKALYSLRDPDEVMSFLRR  277 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~----~~~~A~~~~~~~~~v~~~l~~  277 (288)
                      ..|..+++.+..    ..+   .++++||+.||++|.+.+     ++.++-+.-.    ....+.+...+-.+|.++|++
T Consensus       143 ~~K~~~l~~~~~----~~~---~~i~iGDg~~D~~~a~~A-----d~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~  210 (214)
T TIGR03333       143 CCKPSLIRKLSE----PND---YHIVIGDSVTDVEAAKQS-----DLCFARDYLLNECEELGLNHAPFQDFYDVRKELEN  210 (214)
T ss_pred             CCHHHHHHHHhh----cCC---cEEEEeCCHHHHHHHHhC-----CeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHH
Confidence            458888887653    334   899999999999999988     6766544211    112333334678889888876


Q ss_pred             HH
Q 040896          278 LA  279 (288)
Q Consensus       278 ~~  279 (288)
                      ..
T Consensus       211 ~~  212 (214)
T TIGR03333       211 VK  212 (214)
T ss_pred             Hh
Confidence            54

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=95.57  E-value=0.0091  Score=51.14  Aligned_cols=53  Identities=19%  Similarity=0.044  Sum_probs=39.4

Q ss_pred             CCcEEEEEecCCccccCcCC------------C---------CCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhh
Q 040896           19 GKKIVVFLDYDGTLSPIVED------------P---------DKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDK   71 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~------------~---------~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~   71 (288)
                      .++..++||+|+|+++....            +         .....-|.+++.++.+++++ .|+++|||+...
T Consensus        70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~  144 (229)
T PF03767_consen   70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQ  144 (229)
T ss_dssp             TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTC
T ss_pred             CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchh
Confidence            57899999999999862100            0         12233456889999999996 999999999873

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=95.56  E-value=0.014  Score=49.37  Aligned_cols=43  Identities=23%  Similarity=0.095  Sum_probs=30.7

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEec
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSS  254 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~n  254 (288)
                      |-.|-..++..+   +.+.+   ..++.|||.||+|||+.+     +++++|..
T Consensus       160 g~~Kv~rl~~~~---~~~~~---~~~aYsDS~~D~pmL~~a-----~~~~~Vnp  202 (210)
T TIGR01545       160 GHEKVAQLEQKI---GSPLK---LYSGYSDSKQDNPLLAFC-----EHRWRVSK  202 (210)
T ss_pred             ChHHHHHHHHHh---CCChh---heEEecCCcccHHHHHhC-----CCcEEECc
Confidence            445555555444   43333   778999999999999999     67887753

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>PRK11590 hypothetical protein; Provisional

Probab=95.56  E-value=0.022  Score=47.98  Aligned_cols=43  Identities=21%  Similarity=0.083  Sum_probs=30.8

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEec
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSS  254 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~n  254 (288)
                      |-.|-..|+.   .++.+..   ..++.|||.||+|||+.+     +.+++|..
T Consensus       161 g~~K~~~l~~---~~~~~~~---~~~aY~Ds~~D~pmL~~a-----~~~~~vnp  203 (211)
T PRK11590        161 GHEKVAQLER---KIGTPLR---LYSGYSDSKQDNPLLYFC-----QHRWRVTP  203 (211)
T ss_pred             ChHHHHHHHH---HhCCCcc---eEEEecCCcccHHHHHhC-----CCCEEECc
Confidence            4455544444   4454444   778999999999999999     67887753

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=95.55  E-value=0.019  Score=47.79  Aligned_cols=31  Identities=10%  Similarity=0.047  Sum_probs=24.7

Q ss_pred             HHHHHHHHHHhhcCCEEEEcCCChhhHhhhc
Q 040896           46 DTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        46 ~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~   76 (288)
                      |.+.+.|..|++..+++|+|+.....+..++
T Consensus        71 pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l  101 (205)
T PRK13582         71 PGAVEFLDWLRERFQVVILSDTFYEFAGPLM  101 (205)
T ss_pred             CCHHHHHHHHHhcCCEEEEeCCcHHHHHHHH
Confidence            4567788888776788999999998877764

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=95.55  E-value=0.017  Score=48.79  Aligned_cols=34  Identities=15%  Similarity=-0.000  Sum_probs=29.4

Q ss_pred             CCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh
Q 040896           42 AFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF   75 (288)
Q Consensus        42 ~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~   75 (288)
                      ..+.|.+.+.++.+++.+ .++|+||-+-..+.++
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~i  110 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPI  110 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHH
Confidence            577888999999999996 8999999999777665

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=95.50  E-value=0.01  Score=61.90  Aligned_cols=70  Identities=14%  Similarity=0.193  Sum_probs=51.2

Q ss_pred             eEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCC---CCccceEEeCCh
Q 040896          192 KVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVP---RETKALYSLRDP  268 (288)
Q Consensus       192 ~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~---~~~~A~~~~~~~  268 (288)
                      .+-.++|.   .|+.-|+.+.+..|   .   .|.++||+.||.+||+.+     ..||.+.+..   ....|++++.+-
T Consensus       747 V~aR~sP~---qK~~IV~~lk~~~~---~---~vl~iGDG~ND~~mlk~A-----dVGIgi~g~eg~qA~~aaD~~i~~F  812 (1057)
T TIGR01652       747 ICCRVSPS---QKADVVRLVKKSTG---K---TTLAIGDGANDVSMIQEA-----DVGVGISGKEGMQAVMASDFAIGQF  812 (1057)
T ss_pred             EEeCCCHH---HHHHHHHHHHhcCC---C---eEEEEeCCCccHHHHhhc-----CeeeEecChHHHHHHHhhhhhhhhH
Confidence            45566666   89999988877643   3   899999999999999999     4788765443   234788888764


Q ss_pred             hHHHHHH
Q 040896          269 DEVMSFL  275 (288)
Q Consensus       269 ~~v~~~l  275 (288)
                      ..+.+.|
T Consensus       813 ~~L~~ll  819 (1057)
T TIGR01652       813 RFLTKLL  819 (1057)
T ss_pred             HHHHHHH
Confidence            4444443

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=95.48  E-value=0.018  Score=48.40  Aligned_cols=34  Identities=12%  Similarity=0.003  Sum_probs=28.1

Q ss_pred             CCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhc
Q 040896           43 FMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        43 ~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~   76 (288)
                      .+.|...+.|+.|++.++++|+||.....+.+++
T Consensus        68 ~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il  101 (203)
T TIGR02137        68 KPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLM  101 (203)
T ss_pred             CCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHH
Confidence            5677788889888887799999999998777764

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=95.33  E-value=0.018  Score=59.15  Aligned_cols=61  Identities=25%  Similarity=0.275  Sum_probs=49.3

Q ss_pred             eEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEec-CCC--CccceEEeCC
Q 040896          192 KVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSS-VPR--ETKALYSLRD  267 (288)
Q Consensus       192 ~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~n-a~~--~~~A~~~~~~  267 (288)
                      .|-.+.|.   .|..-|+.+.++ |   .   .|.+.||+.||.+||+.|     ..||+|+. +.+  +.+|+.++.+
T Consensus       618 VfARvsP~---qK~~IV~~lq~~-g---~---vVamtGDGvNDapALk~A-----DVGIamg~~Gtdaak~Aadivl~d  681 (917)
T COG0474         618 VFARVSPE---QKARIVEALQKS-G---H---VVAMTGDGVNDAPALKAA-----DVGIAMGGEGTDAAKEAADIVLLD  681 (917)
T ss_pred             EEEEcCHH---HHHHHHHHHHhC-C---C---EEEEeCCCchhHHHHHhc-----CccEEecccHHHHHHhhcceEeec
Confidence            67778888   899988888876 4   3   899999999999999999     59998885 443  4578877654

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=95.33  E-value=0.013  Score=48.78  Aligned_cols=32  Identities=16%  Similarity=0.234  Sum_probs=28.2

Q ss_pred             HHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          207 ALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       207 al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      ....+++.++.++.   .|+++||+.||++|++.+
T Consensus       183 ~~~~~i~~l~~~~~---~v~~vGDg~nD~~al~~A  214 (215)
T PF00702_consen  183 IFLRIIKELQVKPG---EVAMVGDGVNDAPALKAA  214 (215)
T ss_dssp             HHHHHHHHHTCTGG---GEEEEESSGGHHHHHHHS
T ss_pred             hHHHHHHHHhcCCC---EEEEEccCHHHHHHHHhC
Confidence            56778888888777   999999999999999987

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=95.31  E-value=0.027  Score=45.60  Aligned_cols=32  Identities=22%  Similarity=-0.016  Sum_probs=23.9

Q ss_pred             CHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           45 SDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        45 ~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      .+.+.+.|+.+++.+ .++|+||.....+.+.+
T Consensus        75 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~  107 (177)
T TIGR01488        75 RPGARELISWLKERGIDTVIVSGGFDFFVEPVA  107 (177)
T ss_pred             CcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH
Confidence            456777777777775 78899998887777654

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=95.23  E-value=0.024  Score=51.61  Aligned_cols=48  Identities=21%  Similarity=0.241  Sum_probs=38.5

Q ss_pred             CcEEEEEecCCccccCc------CCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCC
Q 040896           20 KKIVVFLDYDGTLSPIV------EDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGR   67 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~------~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR   67 (288)
                      +++++|+|.||||....      ..+.+..+.|...++|.+|++.+ +++|+|..
T Consensus         1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq   55 (354)
T PRK05446          1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQ   55 (354)
T ss_pred             CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence            36899999999999842      12234577888999999999885 89999985

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=95.13  E-value=0.043  Score=44.32  Aligned_cols=56  Identities=18%  Similarity=0.210  Sum_probs=43.0

Q ss_pred             cEEEEEecCCccccCcCCCCC-------------------CCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhc
Q 040896           21 KIVVFLDYDGTLSPIVEDPDK-------------------AFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~-------------------~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~   76 (288)
                      ++.+++|||+||+.....+..                   -...|.+.+.|.+|.+...++|.|..+..-+..++
T Consensus         1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il   75 (162)
T TIGR02251         1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVL   75 (162)
T ss_pred             CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHH
Confidence            468999999999975433311                   02567889999999887789999999888777765

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=95.13  E-value=0.067  Score=37.04  Aligned_cols=58  Identities=29%  Similarity=0.310  Sum_probs=43.5

Q ss_pred             HHHHHHHHhcCCCCCCCceeEEEcCC-cccHHHHHHHHhcCCceEEEEecCC--C------CccceEEeCChhH
Q 040896          206 RALEYLLDTFGFNNASDFLPLYIGDD-KTDEDAFKVIRHMGRGYPIIVSSVP--R------ETKALYSLRDPDE  270 (288)
Q Consensus       206 ~al~~l~~~~~~~~~~~~~vv~~GDs-~ND~~Ml~~~~~~~~g~~v~v~na~--~------~~~A~~~~~~~~~  270 (288)
                      ..++..++.++++++   +++++||+ ..|+.+=+.+.    -.++.|..+.  .      ...++|++++..+
T Consensus         8 ~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~a~~~G----~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e   74 (75)
T PF13242_consen    8 GMLEQALKRLGVDPS---RCVMVGDSLETDIEAAKAAG----IDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE   74 (75)
T ss_dssp             HHHHHHHHHHTSGGG---GEEEEESSTTTHHHHHHHTT----SEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred             HHHHHHHHHcCCCHH---HEEEEcCCcHhHHHHHHHcC----CcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence            457778888898877   99999999 99999888872    3567776653  2      1368888887543

...

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=95.10  E-value=0.022  Score=46.28  Aligned_cols=56  Identities=20%  Similarity=0.131  Sum_probs=29.7

Q ss_pred             cEEEEEecCCccccCcCCC--------------------CCCCCCHHHHHHHHHHhhcC-CEEEEcCCCh-hhHhhhc
Q 040896           21 KIVVFLDYDGTLSPIVEDP--------------------DKAFMSDTMRMAVHEVAHFF-PTAIVSGRCL-DKVSRFV   76 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~--------------------~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~-~~l~~~~   76 (288)
                      .+|++||||+||.++.-..                    ..-.+-+.+..+|++|++.+ .+++||--+. ..+++.+
T Consensus         3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L   80 (169)
T PF12689_consen    3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELL   80 (169)
T ss_dssp             -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHH
T ss_pred             CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHH
Confidence            5899999999999842110                    01134566777788877774 7777774333 3344443

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=95.06  E-value=0.054  Score=43.46  Aligned_cols=59  Identities=17%  Similarity=0.237  Sum_probs=44.3

Q ss_pred             cCCcEEEEEecCCccccCcCCCCC------------------------------CCCCHHHHHHHHHHhhcCCEEEEcCC
Q 040896           18 KGKKIVVFLDYDGTLSPIVEDPDK------------------------------AFMSDTMRMAVHEVAHFFPTAIVSGR   67 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~~~~~~~~------------------------------~~i~~~~~~aL~~L~~~~~v~i~TGR   67 (288)
                      ..+++.+++|||.||++....+..                              -.+-|.+.+.|++|.+...++|+|..
T Consensus         3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~   82 (156)
T TIGR02250         3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG   82 (156)
T ss_pred             cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence            457889999999999984322100                              11356889999999977789999999


Q ss_pred             ChhhHhhhc
Q 040896           68 CLDKVSRFV   76 (288)
Q Consensus        68 ~~~~l~~~~   76 (288)
                      +..-+...+
T Consensus        83 ~~~yA~~vl   91 (156)
T TIGR02250        83 TRAYAQAIA   91 (156)
T ss_pred             cHHHHHHHH
Confidence            998777765

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=95.01  E-value=0.095  Score=44.29  Aligned_cols=63  Identities=14%  Similarity=0.018  Sum_probs=47.4

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCC-----CccceEEeCChhHHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPR-----ETKALYSLRDPDEVM  272 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~-----~~~A~~~~~~~~~v~  272 (288)
                      -.+...++.+++.+|++++   ++++|||+.+|+++-+.+     |. ++.+.....     ...|++++.+..++.
T Consensus       148 Kp~~~~~~~~~~~~~~~~~---~~~~igDs~~Di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~  216 (222)
T PRK10826        148 KPHPEVYLNCAAKLGVDPL---TCVALEDSFNGMIAAKAA-----RMRSIVVPAPEQQNDPRWALADVKLESLTELT  216 (222)
T ss_pred             CCCHHHHHHHHHHcCCCHH---HeEEEcCChhhHHHHHHc-----CCEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence            3566799999999999887   999999999999999888     54 455544321     135777777776653

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=95.01  E-value=0.049  Score=44.41  Aligned_cols=37  Identities=32%  Similarity=0.466  Sum_probs=31.5

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          198 PCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       198 ~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      +. |..|+..++.+++.+   ++   +++++||+.||+++.+.+
T Consensus       145 ~~-g~~K~~~~~~~~~~~---~~---~~i~iGD~~~D~~aa~~~  181 (188)
T TIGR01489       145 PC-GCCKGKVIHKLSEPK---YQ---HIIYIGDGVTDVCPAKLS  181 (188)
T ss_pred             CC-CCCHHHHHHHHHhhc---Cc---eEEEECCCcchhchHhcC
Confidence            55 788999999998875   34   999999999999988776

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=94.93  E-value=0.048  Score=45.97  Aligned_cols=15  Identities=40%  Similarity=0.445  Sum_probs=13.3

Q ss_pred             CcEEEEEecCCcccc
Q 040896           20 KKIVVFLDYDGTLSP   34 (288)
Q Consensus        20 ~~~li~~DlDGTL~~   34 (288)
                      ..++++||+||||++
T Consensus         5 ~~~~iiFD~DGTL~d   19 (226)
T PRK13222          5 DIRAVAFDLDGTLVD   19 (226)
T ss_pred             cCcEEEEcCCccccc
Confidence            467999999999996

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=94.84  E-value=0.12  Score=45.16  Aligned_cols=70  Identities=14%  Similarity=0.052  Sum_probs=46.2

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCC-CHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh---cCCCC-eEEEccCceeEe
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFM-SDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF---VQLKN-VVYAGSHGMDIS   92 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i-~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~---~~~~~-~~~i~~nGa~i~   92 (288)
                      ...+|+||||.||....   ...+| .+...+.|.+|++.+ .+++=|-...+.+..-   +++++ +.+|-++|....
T Consensus       121 ~phVIVfDlD~TLItd~---~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~  196 (297)
T PF05152_consen  121 PPHVIVFDLDSTLITDE---GDVRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAG  196 (297)
T ss_pred             CCcEEEEECCCcccccC---CccccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCC
Confidence            56899999999999843   22233 568899999999997 5566565566555553   34443 334545555443

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=94.83  E-value=0.047  Score=57.06  Aligned_cols=70  Identities=20%  Similarity=0.172  Sum_probs=54.3

Q ss_pred             eEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCCccceEEeC--Chh
Q 040896          192 KVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRETKALYSLR--DPD  269 (288)
Q Consensus       192 ~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~~~A~~~~~--~~~  269 (288)
                      .|--+.|.   .|..-|+.+.+. |   .   .|...||+.||.++|+.|     ..||+|+++....+|+++..  +..
T Consensus       781 VfAR~sP~---qK~~iV~~lq~~-g---~---~V~m~GDG~ND~~ALK~A-----dVGIam~~~das~AA~f~l~~~~~~  845 (1054)
T TIGR01657       781 VFARMAPD---QKETLVELLQKL-D---Y---TVGMCGDGANDCGALKQA-----DVGISLSEAEASVAAPFTSKLASIS  845 (1054)
T ss_pred             EEEecCHH---HHHHHHHHHHhC-C---C---eEEEEeCChHHHHHHHhc-----CcceeeccccceeecccccCCCcHH
Confidence            57778888   999999988763 3   3   889999999999999999     58999998755567888764  344


Q ss_pred             HHHHHHH
Q 040896          270 EVMSFLR  276 (288)
Q Consensus       270 ~v~~~l~  276 (288)
                      .|...++
T Consensus       846 ~I~~~I~  852 (1054)
T TIGR01657       846 CVPNVIR  852 (1054)
T ss_pred             HHHHHHH
Confidence            5555543

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>PLN03190 aminophospholipid translocase; Provisional

Probab=94.78  E-value=0.044  Score=57.60  Aligned_cols=67  Identities=12%  Similarity=0.203  Sum_probs=44.6

Q ss_pred             EEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCC--C-CccceEEeCChhH
Q 040896          194 MEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVP--R-ETKALYSLRDPDE  270 (288)
Q Consensus       194 ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~--~-~~~A~~~~~~~~~  270 (288)
                      .-++|.   .|+.-|+.+.+..+   .   .|+++||+.||.+|++.|     ..||.+....  + ...|||.+..-.-
T Consensus       852 cR~sP~---QKa~IV~~vk~~~~---~---vtlaIGDGaNDv~mIq~A-----dVGIGIsG~EG~qA~~aSDfaI~~Fr~  917 (1178)
T PLN03190        852 CRVAPL---QKAGIVALVKNRTS---D---MTLAIGDGANDVSMIQMA-----DVGVGISGQEGRQAVMASDFAMGQFRF  917 (1178)
T ss_pred             ecCCHH---HHHHHHHHHHhcCC---c---EEEEECCCcchHHHHHhc-----CeeeeecCchhHHHHHhhccchhhhHH
Confidence            445555   78777776665432   2   789999999999999999     4777554332  2 2478887765444


Q ss_pred             HHHH
Q 040896          271 VMSF  274 (288)
Q Consensus       271 v~~~  274 (288)
                      +.++
T Consensus       918 L~rL  921 (1178)
T PLN03190        918 LVPL  921 (1178)
T ss_pred             HHHH
Confidence            4443

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=94.65  E-value=0.077  Score=45.48  Aligned_cols=79  Identities=25%  Similarity=0.271  Sum_probs=51.3

Q ss_pred             EEEeCCCCCCHHHHHHHHHHhc---CCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEec-------C-CC-Cccc
Q 040896          194 MEIRPCIDWDKGRALEYLLDTF---GFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSS-------V-PR-ETKA  261 (288)
Q Consensus       194 ieI~~~~~~sKg~al~~l~~~~---~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~n-------a-~~-~~~A  261 (288)
                      ..-.|+ +.-||..++.+++..   |.+.+   +|+++||+.||.-....++..  .+.++=.+       + .+ ...|
T Consensus       142 C~~C~~-NmCK~~il~~~~~~~~~~g~~~~---rviYiGDG~nD~Cp~~~L~~~--D~v~~R~~~~l~~~i~~~~~~~~a  215 (234)
T PF06888_consen  142 CSLCPP-NMCKGKILERLLQEQAQRGVPYD---RVIYIGDGRNDFCPALRLRPR--DVVFPRKGYPLHKLIQKNPGEVKA  215 (234)
T ss_pred             CCcCCC-ccchHHHHHHHHHHHhhcCCCcc---eEEEECCCCCCcCcccccCCC--CEEecCCCChHHHHHhcCCCccee
Confidence            345577 889999999999884   55444   999999999998765544321  23322211       0 11 2356


Q ss_pred             eEEe-CChhHHHHHHHHH
Q 040896          262 LYSL-RDPDEVMSFLRRL  278 (288)
Q Consensus       262 ~~~~-~~~~~v~~~l~~~  278 (288)
                      ..+. ++..++.+.|+++
T Consensus       216 ~v~~W~~g~~i~~~l~~~  233 (234)
T PF06888_consen  216 EVVPWSSGEEILEILLQL  233 (234)
T ss_pred             EEEecCCHHHHHHHHHhh
Confidence            5443 4778888888775

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=94.64  E-value=0.053  Score=47.28  Aligned_cols=52  Identities=21%  Similarity=0.201  Sum_probs=38.1

Q ss_pred             CcEEEEEecCCccccCc----------CC------------CCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhh
Q 040896           20 KKIVVFLDYDGTLSPIV----------ED------------PDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDK   71 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~----------~~------------~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~   71 (288)
                      .+-++++|+|+|+++..          +.            ......-|.+++.++.+++.+ .|+++|||+-..
T Consensus       100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~  174 (275)
T TIGR01680       100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDK  174 (275)
T ss_pred             CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            56899999999999410          00            013344567889999999886 899999998643

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PLN02940 riboflavin kinase

Probab=94.44  E-value=0.074  Score=49.14  Aligned_cols=30  Identities=10%  Similarity=0.049  Sum_probs=21.7

Q ss_pred             HHHHHHHHHHhhcC-CEEEEcCCChhhHhhh
Q 040896           46 DTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF   75 (288)
Q Consensus        46 ~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~   75 (288)
                      +.+.+.|+.|++.+ +++|+|+.+...+...
T Consensus        96 pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~  126 (382)
T PLN02940         96 PGANRLIKHLKSHGVPMALASNSPRANIEAK  126 (382)
T ss_pred             cCHHHHHHHHHHCCCcEEEEeCCcHHHHHHH
Confidence            44566777887774 8899999888766544

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=94.37  E-value=0.051  Score=44.34  Aligned_cols=15  Identities=47%  Similarity=0.753  Sum_probs=12.9

Q ss_pred             cEEEEEecCCccccC
Q 040896           21 KIVVFLDYDGTLSPI   35 (288)
Q Consensus        21 ~~li~~DlDGTL~~~   35 (288)
                      +.+++||+||||++.
T Consensus         1 ~~~iiFD~dgTL~~~   15 (188)
T TIGR01489         1 KVVVVSDFDGTITLN   15 (188)
T ss_pred             CeEEEEeCCCcccCC
Confidence            358999999999984

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=94.37  E-value=0.062  Score=44.48  Aligned_cols=28  Identities=11%  Similarity=-0.060  Sum_probs=20.3

Q ss_pred             CCCHHHHHHHHHHhhcC-CEEEEcCCChh
Q 040896           43 FMSDTMRMAVHEVAHFF-PTAIVSGRCLD   70 (288)
Q Consensus        43 ~i~~~~~~aL~~L~~~~-~v~i~TGR~~~   70 (288)
                      .+-+.+.++|++|.+.+ .++++|+|+..
T Consensus        73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~  101 (191)
T PF06941_consen   73 PPIPGAVEALKKLRDKGHEIVIITARPPE  101 (191)
T ss_dssp             -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred             CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence            34567899999999886 78888888754

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=94.36  E-value=0.05  Score=45.86  Aligned_cols=34  Identities=18%  Similarity=0.076  Sum_probs=26.0

Q ss_pred             CCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           43 FMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        43 ~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      .+.|.+.+.|+.|++++ .++|+||.....+.+++
T Consensus        70 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il  104 (214)
T TIGR03333        70 EIREGFREFVAFINEHGIPFYVISGGMDFFVYPLL  104 (214)
T ss_pred             cccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHH
Confidence            45566777888888774 89999999887777654

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=94.28  E-value=0.2  Score=43.75  Aligned_cols=69  Identities=10%  Similarity=-0.001  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHhcCCC-CCCCceeEEEcCCcccHHHHHHHHhcCCc-eEEEEecCCC------------------------
Q 040896          204 KGRALEYLLDTFGFN-NASDFLPLYIGDDKTDEDAFKVIRHMGRG-YPIIVSSVPR------------------------  257 (288)
Q Consensus       204 Kg~al~~l~~~~~~~-~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g-~~v~v~na~~------------------------  257 (288)
                      +...+...++++++. ++   ++++|||+.+|+.+=+.+     | .+|.+..+..                        
T Consensus       160 ~p~~~~~a~~~l~~~~~~---e~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (267)
T PRK13478        160 YPWMALKNAIELGVYDVA---ACVKVDDTVPGIEEGLNA-----GMWTVGVILSGNELGLSEEEYQALSAAELAARRERA  231 (267)
T ss_pred             ChHHHHHHHHHcCCCCCc---ceEEEcCcHHHHHHHHHC-----CCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHH
Confidence            456788889999985 46   899999999998877776     4 3455544321                        


Q ss_pred             -----CccceEEeCChhHHHHHHHHHHH
Q 040896          258 -----ETKALYSLRDPDEVMSFLRRLAR  280 (288)
Q Consensus       258 -----~~~A~~~~~~~~~v~~~l~~~~~  280 (288)
                           +.-|++++++..++..+|+.+..
T Consensus       232 ~~~l~~~~a~~vi~~~~~l~~~l~~~~~  259 (267)
T PRK13478        232 RARLRAAGAHYVIDTIADLPAVIADIEA  259 (267)
T ss_pred             HHHHHHcCCCeehhhHHHHHHHHHHHHH
Confidence                 13588999999999988864433

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=94.25  E-value=0.024  Score=46.50  Aligned_cols=36  Identities=8%  Similarity=0.002  Sum_probs=31.0

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      -+-..+...+++++++++   ++++|||+.+|+..=..+
T Consensus       143 P~p~~~~~~~~~~~~~~~---~~l~igDs~~di~aA~~a  178 (188)
T PRK10725        143 PAPDTFLRCAQLMGVQPT---QCVVFEDADFGIQAARAA  178 (188)
T ss_pred             CChHHHHHHHHHcCCCHH---HeEEEeccHhhHHHHHHC
Confidence            566789999999999877   999999999998876666

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=94.23  E-value=0.15  Score=41.66  Aligned_cols=48  Identities=17%  Similarity=0.210  Sum_probs=34.3

Q ss_pred             cEEEEEecCCccccCcCC----CCCCCCCHHHHHHHHHHhhcC-CEEEEcCCC
Q 040896           21 KIVVFLDYDGTLSPIVED----PDKAFMSDTMRMAVHEVAHFF-PTAIVSGRC   68 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~----~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~   68 (288)
                      .|+++||.||||......    ...-.+-+.+.++|++|++.+ .++|+|..+
T Consensus         3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~   55 (181)
T PRK08942          3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQS   55 (181)
T ss_pred             ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence            589999999999764311    112234567789999999885 788777655

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=94.18  E-value=0.044  Score=44.97  Aligned_cols=45  Identities=20%  Similarity=0.161  Sum_probs=32.6

Q ss_pred             cEEEEEecCCccccCcC----CCCCCCCCHHHHHHHHHHhhcC-CEEEEc
Q 040896           21 KIVVFLDYDGTLSPIVE----DPDKAFMSDTMRMAVHEVAHFF-PTAIVS   65 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~----~~~~~~i~~~~~~aL~~L~~~~-~v~i~T   65 (288)
                      .+++|+|-||||-....    ..++-...+.++++|.+|++.+ .++++|
T Consensus         5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvT   54 (181)
T COG0241           5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVT   54 (181)
T ss_pred             CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCCCeEEEEE
Confidence            68999999999987432    1123345677889999998775 677766

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=94.09  E-value=0.098  Score=43.56  Aligned_cols=58  Identities=16%  Similarity=0.096  Sum_probs=43.0

Q ss_pred             CCcEEEEEecCCccccCcCC--CCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhc
Q 040896           19 GKKIVVFLDYDGTLSPIVED--PDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~--~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~   76 (288)
                      .+++++++|||+||+++...  ...-...|.+.+.|+.+.+.-.|+|=|..+...+...+
T Consensus        19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l   78 (195)
T TIGR02245        19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKM   78 (195)
T ss_pred             CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHH
Confidence            46799999999999975211  11224567899999999998788888887777666643

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=93.99  E-value=0.034  Score=49.22  Aligned_cols=60  Identities=17%  Similarity=0.112  Sum_probs=45.0

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCC--CC--ccceEEeCChhH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVP--RE--TKALYSLRDPDE  270 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~--~~--~~A~~~~~~~~~  270 (288)
                      -+...+..++++++++++   ++++|||+.+|+.+-+.+     |. .|.+..+.  .+  ..|++++++..+
T Consensus       203 P~p~~~~~a~~~~~~~p~---~~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~l~~ad~vi~~~~~  267 (286)
T PLN02779        203 PDPDIYNLAAETLGVDPS---RCVVVEDSVIGLQAAKAA-----GMRCIVTKSSYTADEDFSGADAVFDCLGD  267 (286)
T ss_pred             CCHHHHHHHHHHhCcChH---HEEEEeCCHHhHHHHHHc-----CCEEEEEccCCccccccCCCcEEECChhh
Confidence            346688999999999887   999999999999988887     54 45554432  22  358888887654

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=93.87  E-value=0.1  Score=43.02  Aligned_cols=39  Identities=13%  Similarity=0.137  Sum_probs=31.8

Q ss_pred             CCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh---cCCC
Q 040896           41 KAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF---VQLK   79 (288)
Q Consensus        41 ~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~---~~~~   79 (288)
                      ..+++|..++..++|++++ .|+++||--+..+.+.   +++|
T Consensus        86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~  128 (227)
T KOG1615|consen   86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIP  128 (227)
T ss_pred             CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCc
Confidence            4567889999999999995 8999999888777765   5554

>PRK11587 putative phosphatase; Provisional

Probab=93.81  E-value=0.029  Score=47.39  Aligned_cols=61  Identities=11%  Similarity=0.014  Sum_probs=45.2

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCc-eEEEEecCCC---CccceEEeCChhHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRG-YPIIVSSVPR---ETKALYSLRDPDEV  271 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g-~~v~v~na~~---~~~A~~~~~~~~~v  271 (288)
                      -+.......++.+|++++   ++++|||+.+|+.+=+.+     | .++.+.+...   ...+++++++..++
T Consensus       139 P~p~~~~~~~~~~g~~p~---~~l~igDs~~di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~el  203 (218)
T PRK11587        139 PEPDAYLLGAQLLGLAPQ---ECVVVEDAPAGVLSGLAA-----GCHVIAVNAPADTPRLDEVDLVLHSLEQL  203 (218)
T ss_pred             CCcHHHHHHHHHcCCCcc---cEEEEecchhhhHHHHHC-----CCEEEEECCCCchhhhccCCEEecchhhe
Confidence            346778888899999888   999999999998866666     5 4677765532   23577777776654

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=93.78  E-value=0.042  Score=45.71  Aligned_cols=34  Identities=21%  Similarity=0.281  Sum_probs=28.8

Q ss_pred             HHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHH
Q 040896          205 GRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVI  241 (288)
Q Consensus       205 g~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~  241 (288)
                      ....+.+++.+|++++   ++++|||+. +|+..=+.+
T Consensus       163 ~~~~~~~~~~~~~~~~---~~~~IgD~~~~Di~~A~~a  197 (203)
T TIGR02252       163 PKIFQEALERAGISPE---EALHIGDSLRNDYQGARAA  197 (203)
T ss_pred             HHHHHHHHHHcCCChh---HEEEECCCchHHHHHHHHc
Confidence            4568889999999887   999999997 898876665

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=93.76  E-value=0.097  Score=43.39  Aligned_cols=32  Identities=13%  Similarity=-0.089  Sum_probs=22.6

Q ss_pred             CCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh
Q 040896           44 MSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF   75 (288)
Q Consensus        44 i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~   75 (288)
                      +.+.+.+.|+++++++ .++|+||.+...+..+
T Consensus        88 ~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~  120 (202)
T TIGR01490        88 LYPEARDLIRWHKAEGHTIVLVSASLTILVKPL  120 (202)
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH
Confidence            4556677777777764 7888888887666655

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=93.71  E-value=0.13  Score=47.41  Aligned_cols=70  Identities=20%  Similarity=0.157  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC---ccceEEeCChhHH-HHHHHHHH
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE---TKALYSLRDPDEV-MSFLRRLA  279 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~---~~A~~~~~~~~~v-~~~l~~~~  279 (288)
                      +.......++.+|+.++   ++++|||+.+|+.+-+.+.    -..|.+.+....   ..|++++++.+++ ...++.++
T Consensus       274 ~Peifl~A~~~lgl~Pe---ecl~IGDS~~DIeAAk~AG----m~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l~  346 (381)
T PLN02575        274 DPEMFIYAAQLLNFIPE---RCIVFGNSNQTVEAAHDAR----MKCVAVASKHPIYELGAADLVVRRLDELSIVDLKNLA  346 (381)
T ss_pred             CHHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHcC----CEEEEECCCCChhHhcCCCEEECCHHHHHHHHHhhhh
Confidence            34566667777788877   9999999999988777662    245666654321   3588899998886 44555554


Q ss_pred             H
Q 040896          280 R  280 (288)
Q Consensus       280 ~  280 (288)
                      .
T Consensus       347 ~  347 (381)
T PLN02575        347 D  347 (381)
T ss_pred             h
Confidence            4

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=93.63  E-value=0.033  Score=46.21  Aligned_cols=32  Identities=16%  Similarity=0.138  Sum_probs=27.1

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHH
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAF  238 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml  238 (288)
                      +...+..+++.++++++   ++++|||+.+|+.+-
T Consensus       163 ~p~~~~~~~~~~~~~~~---~~i~vGD~~~Di~aA  194 (197)
T TIGR01548       163 NPEPLILAAKALGVEAC---HAAMVGDTVDDIITG  194 (197)
T ss_pred             CHHHHHHHHHHhCcCcc---cEEEEeCCHHHHHHH
Confidence            45678888899999887   999999999998754

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=93.59  E-value=0.1  Score=43.96  Aligned_cols=59  Identities=15%  Similarity=0.211  Sum_probs=42.6

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCce-EEEEecCCC-------CccceEEeCChhH
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGY-PIIVSSVPR-------ETKALYSLRDPDE  270 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~-~v~v~na~~-------~~~A~~~~~~~~~  270 (288)
                      +....+.+++.+|++++   ++++|||+. +|+.+=+.+     |+ +|.+.....       ...+++++.+..+
T Consensus       152 ~~~~~~~~~~~~~~~~~---~~~~igDs~~~di~~A~~a-----G~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~e  219 (221)
T TIGR02253       152 HPKIFYAALKRLGVKPE---EAVMVGDRLDKDIKGAKNL-----GMKTVWINQGKSSKMEDDVYPYPDYEISSLRE  219 (221)
T ss_pred             CHHHHHHHHHHcCCChh---hEEEECCChHHHHHHHHHC-----CCEEEEECCCCCcccccccccCCCeeeCcHHh
Confidence            45688999999999887   999999997 999877777     54 566654321       1245667666554

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=93.58  E-value=0.16  Score=43.19  Aligned_cols=68  Identities=16%  Similarity=0.179  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce--EEEEecCCC--CccceEEeCChhHHHHHHHHHH
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY--PIIVSSVPR--ETKALYSLRDPDEVMSFLRRLA  279 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~--~v~v~na~~--~~~A~~~~~~~~~v~~~l~~~~  279 (288)
                      +....+.++++++++++   ++++|||+.+|+..=+.+     |.  .+.|.+...  ...+...+.+.+++.++++.+.
T Consensus       151 ~p~~~~~~~~~~~~~p~---~~l~igDs~~di~aA~~a-----G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  222 (224)
T PRK14988        151 DQRLWQAVAEHTGLKAE---RTLFIDDSEPILDAAAQF-----GIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM  222 (224)
T ss_pred             CHHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHc-----CCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhhc
Confidence            46788999999999888   999999999997755555     55  355666533  2345455667788888776653

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=93.55  E-value=0.044  Score=47.05  Aligned_cols=64  Identities=13%  Similarity=0.080  Sum_probs=42.4

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCC-cccHHHHHHHHhcCCce-EEEEecCCC---C-----ccceEEeCChhHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDD-KTDEDAFKVIRHMGRGY-PIIVSSVPR---E-----TKALYSLRDPDEVM  272 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs-~ND~~Ml~~~~~~~~g~-~v~v~na~~---~-----~~A~~~~~~~~~v~  272 (288)
                      -+.......++.++++++   +++++||+ ..|+..=+.+     |. ++.+.+...   .     ...++.+.+..++.
T Consensus       164 P~p~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~A~~a-----G~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~  235 (238)
T PRK10748        164 PFSDMYHLAAEKLNVPIG---EILHVGDDLTTDVAGAIRC-----GMQACWINPENGDLMQTWDSRLLPHIEISRLASLT  235 (238)
T ss_pred             CcHHHHHHHHHHcCCChh---HEEEEcCCcHHHHHHHHHC-----CCeEEEEcCCCccccccccccCCCCEEECCHHHHH
Confidence            346678888899999877   99999999 5998876665     54 455543211   1     13445566666655


Q ss_pred             HH
Q 040896          273 SF  274 (288)
Q Consensus       273 ~~  274 (288)
                      ++
T Consensus       236 ~~  237 (238)
T PRK10748        236 SL  237 (238)
T ss_pred             hh
Confidence            43

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=93.45  E-value=0.039  Score=46.40  Aligned_cols=14  Identities=43%  Similarity=0.532  Sum_probs=13.0

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .++|+||+||||++
T Consensus         3 ~~~viFD~DGTL~d   16 (214)
T PRK13288          3 INTVLFDLDGTLIN   16 (214)
T ss_pred             ccEEEEeCCCcCcc
Confidence            57899999999998

>PRK11590 hypothetical protein; Provisional

Probab=93.42  E-value=0.042  Score=46.28  Aligned_cols=17  Identities=47%  Similarity=0.747  Sum_probs=14.6

Q ss_pred             cCCcEEEEEecCCcccc
Q 040896           18 KGKKIVVFLDYDGTLSP   34 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~   34 (288)
                      ..++++++||+||||+.
T Consensus         3 ~~~~k~~iFD~DGTL~~   19 (211)
T PRK11590          3 THERRVVFFDLDGTLHQ   19 (211)
T ss_pred             CccceEEEEecCCCCcc
Confidence            34678999999999995

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=93.42  E-value=0.038  Score=47.76  Aligned_cols=68  Identities=13%  Similarity=0.163  Sum_probs=48.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCC-----CccceEEeCChhH--HHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPR-----ETKALYSLRDPDE--VMSF  274 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~-----~~~A~~~~~~~~~--v~~~  274 (288)
                      -+.....+.+++++++++   ++++|||+.+|+.+=+.+     |. .+.+..+..     ...|++++++..+  +.+.
T Consensus       165 P~p~~~~~a~~~~~~~~~---~~l~vgDs~~Di~aA~~a-----Gi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~~~~~  236 (248)
T PLN02770        165 PHPDPYLKALEVLKVSKD---HTFVFEDSVSGIKAGVAA-----GMPVVGLTTRNPESLLMEAKPTFLIKDYEDPKLWAA  236 (248)
T ss_pred             CChHHHHHHHHHhCCChh---HEEEEcCCHHHHHHHHHC-----CCEEEEEeCCCCHHHHhhcCCCEEeccchhhHHHHH
Confidence            456788999999999887   999999999999877766     54 455543322     2368888888766  4444


Q ss_pred             HHHH
Q 040896          275 LRRL  278 (288)
Q Consensus       275 l~~~  278 (288)
                      |+.+
T Consensus       237 ~~~~  240 (248)
T PLN02770        237 LEEL  240 (248)
T ss_pred             Hhhc
Confidence            4433

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=93.28  E-value=0.055  Score=45.58  Aligned_cols=65  Identities=14%  Similarity=0.037  Sum_probs=47.4

Q ss_pred             CHHHHHHHHHHhcCCC-CCCCceeEEEcCCcccHHHHHHHHhcCCceE--EEEecCC--C----CccceEEeCChhHHHH
Q 040896          203 DKGRALEYLLDTFGFN-NASDFLPLYIGDDKTDEDAFKVIRHMGRGYP--IIVSSVP--R----ETKALYSLRDPDEVMS  273 (288)
Q Consensus       203 sKg~al~~l~~~~~~~-~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~--v~v~na~--~----~~~A~~~~~~~~~v~~  273 (288)
                      -+...+...+++++++ ++   ++++|||+.+|+.+-+.+     |+.  +.+..+.  .    ...+++++++..++..
T Consensus       146 P~p~~~~~a~~~~~~~~~~---~~~~igD~~~Di~aa~~a-----G~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~  217 (220)
T TIGR03351       146 PAPDLILRAMELTGVQDVQ---SVAVAGDTPNDLEAGINA-----GAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPA  217 (220)
T ss_pred             CCHHHHHHHHHHcCCCChh---HeEEeCCCHHHHHHHHHC-----CCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHH
Confidence            4678899999999986 56   999999999999988877     654  4444332  1    1357778888777655


Q ss_pred             HH
Q 040896          274 FL  275 (288)
Q Consensus       274 ~l  275 (288)
                      .+
T Consensus       218 ~~  219 (220)
T TIGR03351       218 LL  219 (220)
T ss_pred             hh
Confidence            43

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=93.24  E-value=0.18  Score=50.21  Aligned_cols=60  Identities=22%  Similarity=0.200  Sum_probs=46.2

Q ss_pred             EEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEe-cCCC--CccceEEeCC
Q 040896          193 VMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVS-SVPR--ETKALYSLRD  267 (288)
Q Consensus       193 ~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~-na~~--~~~A~~~~~~  267 (288)
                      |--..|+   .|-.-++.|.+.    .+   -|..-||+-||-+.|+.+     ..||||| ++.+  |.+|+.|+.|
T Consensus       658 FaR~~P~---HK~kIVeaLq~~----ge---ivAMTGDGVNDApALK~A-----dIGIAMG~~GTdVaKeAsDMVL~D  720 (972)
T KOG0202|consen  658 FARAEPQ---HKLKIVEALQSR----GE---VVAMTGDGVNDAPALKKA-----DIGIAMGISGTDVAKEASDMVLAD  720 (972)
T ss_pred             EEecCch---hHHHHHHHHHhc----CC---EEEecCCCccchhhhhhc-----ccceeecCCccHhhHhhhhcEEec
Confidence            3444455   888888777664    33   667779999999999999     5999999 7765  5789988864

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=93.20  E-value=0.093  Score=46.10  Aligned_cols=58  Identities=17%  Similarity=0.300  Sum_probs=42.2

Q ss_pred             CCcEEEEEecCCccccCcC-CC-----------CCCCCCHHHHHHHHHHhhc-CCEEEEcCCChhhHhhhc
Q 040896           19 GKKIVVFLDYDGTLSPIVE-DP-----------DKAFMSDTMRMAVHEVAHF-FPTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~-~~-----------~~~~i~~~~~~aL~~L~~~-~~v~i~TGR~~~~l~~~~   76 (288)
                      ..+..|++|+|.||+.... +.           ....+++..++.+++|.++ .++=+-+..+.++=.+++
T Consensus        20 ~~~lqvisDFD~Tlt~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~~~~~~eK~~~m   90 (277)
T TIGR01544        20 AAKLQIISDFDYTLSRFSYEDGKRCPTCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVDPVLTVEEKYPYM   90 (277)
T ss_pred             hhheEEeeccCccceeeecCCCCCCcchHhHHhhCCCCCHHHHHHHHHHHhhccceecCCCCChHHhhhHH
Confidence            3567799999999997541 11           2456788889999999887 577777777776644443

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=93.19  E-value=0.014  Score=47.85  Aligned_cols=43  Identities=19%  Similarity=0.258  Sum_probs=34.0

Q ss_pred             EEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHH
Q 040896          194 MEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIR  242 (288)
Q Consensus       194 ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~  242 (288)
                      .+-+.. +..|+.+|+.+++.++..     .++.+||+.||++|..-+.
T Consensus       151 ~~ptsd-sggKa~~i~~lrk~~~~~-----~~~mvGDGatDlea~~pa~  193 (227)
T KOG1615|consen  151 NEPTSD-SGGKAEVIALLRKNYNYK-----TIVMVGDGATDLEAMPPAD  193 (227)
T ss_pred             CCcccc-CCccHHHHHHHHhCCChh-----eeEEecCCccccccCCchh
Confidence            334455 678999999999955554     8999999999999877654

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=92.95  E-value=0.045  Score=46.30  Aligned_cols=17  Identities=24%  Similarity=0.389  Sum_probs=14.9

Q ss_pred             cCCcEEEEEecCCcccc
Q 040896           18 KGKKIVVFLDYDGTLSP   34 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~   34 (288)
                      ....+.|+||+||||++
T Consensus         4 ~~~~k~iiFD~DGTL~d   20 (222)
T PRK10826          4 PRQILAAIFDMDGLLID   20 (222)
T ss_pred             cccCcEEEEcCCCCCCc
Confidence            34679999999999998

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=92.93  E-value=0.24  Score=40.26  Aligned_cols=65  Identities=17%  Similarity=0.161  Sum_probs=43.6

Q ss_pred             HHHHHHhh-cCCcEEEEEecCCccccCcCC---------C-------------------CCCCCCHHHHHHHHHHhhc-C
Q 040896           10 FDRMVAAA-KGKKIVVFLDYDGTLSPIVED---------P-------------------DKAFMSDTMRMAVHEVAHF-F   59 (288)
Q Consensus        10 ~~~~~~~~-~~~~~li~~DlDGTL~~~~~~---------~-------------------~~~~i~~~~~~aL~~L~~~-~   59 (288)
                      .++|-... .++...+-||+|.|++.....         |                   +...|+.+.-..|-.++.+ +
T Consensus        51 vaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG  130 (237)
T COG3700          51 VAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG  130 (237)
T ss_pred             HHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence            34555553 457788999999999963211         0                   1345677666666666555 7


Q ss_pred             -CEEEEcCCChhhHhh
Q 040896           60 -PTAIVSGRCLDKVSR   74 (288)
Q Consensus        60 -~v~i~TGR~~~~l~~   74 (288)
                       .|+.+|||+......
T Consensus       131 D~i~FvTGRt~gk~d~  146 (237)
T COG3700         131 DAIYFVTGRTPGKTDT  146 (237)
T ss_pred             CeEEEEecCCCCcccc
Confidence             899999999976554

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=92.92  E-value=0.22  Score=41.94  Aligned_cols=29  Identities=21%  Similarity=0.169  Sum_probs=19.6

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF   58 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~   58 (288)
                      .++|+||+||||++.     .    +...++++++.+.
T Consensus         1 ~k~iiFD~DGTL~ds-----~----~~~~~~~~~~~~~   29 (220)
T TIGR03351         1 ISLVVLDMAGTTVDE-----D----GLVYRALRQAVTA   29 (220)
T ss_pred             CcEEEEecCCCeecc-----C----chHHHHHHHHHHH
Confidence            378999999999983     2    2345555555444

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=92.83  E-value=0.05  Score=44.32  Aligned_cols=36  Identities=8%  Similarity=0.049  Sum_probs=30.2

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      .+......+++.++++++   +++++||+.+|+.+-+.+
T Consensus       143 p~~~~~~~~~~~~~~~~~---~~v~IgD~~~di~aA~~~  178 (185)
T TIGR02009       143 PHPETFLLAAELLGVSPN---ECVVFEDALAGVQAARAA  178 (185)
T ss_pred             CChHHHHHHHHHcCCCHH---HeEEEeCcHhhHHHHHHC
Confidence            345677889999999877   999999999999877766

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=92.76  E-value=0.23  Score=49.83  Aligned_cols=70  Identities=17%  Similarity=0.131  Sum_probs=54.2

Q ss_pred             ceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEe--C
Q 040896          191 KKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSL--R  266 (288)
Q Consensus       191 ~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~--~  266 (288)
                      ..+-|+.|.   .|..-++.|.+.-    .   .|+.+||+.||-|.|..+     ..||+++.+..-  ..|++++  +
T Consensus       764 ~V~aev~P~---~K~~~Ik~lq~~~----~---~VaMVGDGINDaPALA~A-----dVGIaig~gs~vAieaADIVLmrn  828 (951)
T KOG0207|consen  764 NVYAEVLPE---QKAEKIKEIQKNG----G---PVAMVGDGINDAPALAQA-----DVGIAIGAGSDVAIEAADIVLMRN  828 (951)
T ss_pred             eEEeccCch---hhHHHHHHHHhcC----C---cEEEEeCCCCccHHHHhh-----ccceeeccccHHHHhhCCEEEEcc
Confidence            456888888   8999999988764    2   789999999999999999     589999888542  5788886  3


Q ss_pred             ChhHHHHHH
Q 040896          267 DPDEVMSFL  275 (288)
Q Consensus       267 ~~~~v~~~l  275 (288)
                      +..+|...+
T Consensus       829 ~L~~v~~ai  837 (951)
T KOG0207|consen  829 DLRDVPFAI  837 (951)
T ss_pred             chhhhHHHH
Confidence            444544433

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=92.65  E-value=0.11  Score=45.00  Aligned_cols=64  Identities=14%  Similarity=0.091  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHhcCCC-CCCCceeEEEcCCcccHHHHHHHHhcCCc-eEEEEecCCC------------------------
Q 040896          204 KGRALEYLLDTFGFN-NASDFLPLYIGDDKTDEDAFKVIRHMGRG-YPIIVSSVPR------------------------  257 (288)
Q Consensus       204 Kg~al~~l~~~~~~~-~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g-~~v~v~na~~------------------------  257 (288)
                      +.......++++++. ++   ++++|||+.+|+.+=+.+     | .+|.+..+..                        
T Consensus       158 ~p~~~~~a~~~l~~~~~~---~~l~IGDs~~Di~aA~~a-----Gi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (253)
T TIGR01422       158 APWMALKNAIELGVYDVA---ACVKVGDTVPDIEEGRNA-----GMWTVGLILSSNELGLSEEEYRALDPAELEARRAEA  229 (253)
T ss_pred             CHHHHHHHHHHcCCCCch---heEEECCcHHHHHHHHHC-----CCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHH
Confidence            456778888899984 66   899999999998877777     4 4566654321                        


Q ss_pred             -----CccceEEeCChhHHHHHH
Q 040896          258 -----ETKALYSLRDPDEVMSFL  275 (288)
Q Consensus       258 -----~~~A~~~~~~~~~v~~~l  275 (288)
                           +..|++++++..++..+|
T Consensus       230 ~~~l~~~~~~~v~~~~~el~~~~  252 (253)
T TIGR01422       230 TARLKAAGAHYVIDTLAELPAVI  252 (253)
T ss_pred             HHHHHhcCCCEehhcHHHHHHhh
Confidence                 135788888888876554

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=92.65  E-value=0.18  Score=48.23  Aligned_cols=57  Identities=25%  Similarity=0.282  Sum_probs=43.7

Q ss_pred             EEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCCccceEEeCC
Q 040896          193 VMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRETKALYSLRD  267 (288)
Q Consensus       193 ~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~~~A~~~~~~  267 (288)
                      +-+..|.   .|..-++.+.+. |   .   .++.+||+.||.+|++.+     ..|++|+   .+..|++++.+
T Consensus       387 ~~~~~p~---~K~~~v~~l~~~-g---~---~v~~vGDg~nD~~al~~A-----dvgia~~---a~~~adivl~~  443 (499)
T TIGR01494       387 FARVTPE---EKAALVEALQKK-G---R---VVAMTGDGVNDAPALKKA-----DVGIAMG---AKAAADIVLLD  443 (499)
T ss_pred             eeccCHH---HHHHHHHHHHHC-C---C---EEEEECCChhhHHHHHhC-----CCccccc---hHHhCCeEEec
Confidence            4556665   888888887543 2   3   899999999999999998     6888887   35568888753

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=92.49  E-value=0.37  Score=45.17  Aligned_cols=74  Identities=20%  Similarity=0.153  Sum_probs=50.7

Q ss_pred             ccchhhHHHHHHh-hcCCcEEEEEecCCccccCcC-----------CCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChh
Q 040896            4 PSALDTFDRMVAA-AKGKKIVVFLDYDGTLSPIVE-----------DPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLD   70 (288)
Q Consensus         4 ~~~~~~~~~~~~~-~~~~~~li~~DlDGTL~~~~~-----------~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~   70 (288)
                      |.|-.--.+++.+ ..+..|.+++|||+||..=..           +...+..-....+.+..|.+++ .++|||=....
T Consensus       204 ~l~~~ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~  283 (574)
T COG3882         204 PLAADEIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEK  283 (574)
T ss_pred             hHhhHHHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchh
Confidence            3333334444444 567789999999999996110           1112333456677778888886 88999999999


Q ss_pred             hHhhhcC
Q 040896           71 KVSRFVQ   77 (288)
Q Consensus        71 ~l~~~~~   77 (288)
                      .+.+.|.
T Consensus       284 da~evF~  290 (574)
T COG3882         284 DAKEVFR  290 (574)
T ss_pred             hHHHHHh
Confidence            9998774

>PRK06769 hypothetical protein; Validated

Probab=92.42  E-value=0.26  Score=40.15  Aligned_cols=65  Identities=17%  Similarity=0.177  Sum_probs=46.1

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCC------------CccceEEeCChh
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPR------------ETKALYSLRDPD  269 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~------------~~~A~~~~~~~~  269 (288)
                      -+......++++++.+++   +++++||+.+|+.+=+.+     |+ +|.+..+..            +..+++++.+..
T Consensus        94 P~p~~~~~~~~~l~~~p~---~~i~IGD~~~Di~aA~~a-----Gi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~  165 (173)
T PRK06769         94 PSTGMLLQAAEKHGLDLT---QCAVIGDRWTDIVAAAKV-----NATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFE  165 (173)
T ss_pred             CCHHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHC-----CCeEEEEecCCCchhhhhhhcccccCCCcchhhCHH
Confidence            345677888888998877   999999999998876666     43 455544321            124667777777


Q ss_pred             HHHHHH
Q 040896          270 EVMSFL  275 (288)
Q Consensus       270 ~v~~~l  275 (288)
                      ++..+|
T Consensus       166 el~~~l  171 (173)
T PRK06769        166 DAVNWI  171 (173)
T ss_pred             HHHHHH
Confidence            776654

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=92.37  E-value=0.12  Score=42.32  Aligned_cols=35  Identities=20%  Similarity=0.279  Sum_probs=28.8

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      +-...+.+++.+|++++   ++++|||+..|+..=+.+
T Consensus       143 ~p~~~~~~~~~~~~~~~---~~l~vgD~~~di~aA~~~  177 (184)
T TIGR01993       143 SPQAYEKALREAGVDPE---RAIFFDDSARNIAAAKAL  177 (184)
T ss_pred             CHHHHHHHHHHhCCCcc---ceEEEeCCHHHHHHHHHc
Confidence            45688899999999887   999999999887755554

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=92.18  E-value=0.54  Score=43.34  Aligned_cols=16  Identities=6%  Similarity=0.264  Sum_probs=14.1

Q ss_pred             CCcEEEEEecCCcccc
Q 040896           19 GKKIVVFLDYDGTLSP   34 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~   34 (288)
                      ...+.++||+||||++
T Consensus       129 ~~~~~VIFDlDGTLID  144 (381)
T PLN02575        129 CGWLGAIFEWEGVIIE  144 (381)
T ss_pred             CCCCEEEEcCcCccee
Confidence            4578999999999998

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=92.17  E-value=0.35  Score=41.70  Aligned_cols=14  Identities=29%  Similarity=0.389  Sum_probs=13.1

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .+.|+||+||||++
T Consensus         2 ~k~viFD~DGTLiD   15 (253)
T TIGR01422         2 IEAVIFDWAGTTVD   15 (253)
T ss_pred             ceEEEEeCCCCeec
Confidence            57899999999999

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=92.02  E-value=0.077  Score=45.15  Aligned_cols=15  Identities=47%  Similarity=0.532  Sum_probs=13.8

Q ss_pred             CcEEEEEecCCcccc
Q 040896           20 KKIVVFLDYDGTLSP   34 (288)
Q Consensus        20 ~~~li~~DlDGTL~~   34 (288)
                      +.++|+|||||||++
T Consensus         9 ~~k~vIFDlDGTL~d   23 (224)
T PRK14988          9 DVDTVLLDMDGTLLD   23 (224)
T ss_pred             cCCEEEEcCCCCccc
Confidence            468999999999999

>PHA02597 30

Probab=91.98  E-value=0.075  Score=44.00  Aligned_cols=62  Identities=13%  Similarity=0.091  Sum_probs=40.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH-HhcCCceEEEEecCCC--CccceEEeCChhHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI-RHMGRGYPIIVSSVPR--ETKALYSLRDPDEVM  272 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~-~~~~~g~~v~v~na~~--~~~A~~~~~~~~~v~  272 (288)
                      .|...+..++++++  ++   .+++|||+.+|+..-+.+ +  | --+|.+..+..  .....|.+++..++.
T Consensus       131 ~kp~~~~~a~~~~~--~~---~~v~vgDs~~di~aA~~a~~--G-i~~i~~~~~~~~~~~~~~~~~~~~~~~~  195 (197)
T PHA02597        131 SKEKLFIKAKEKYG--DR---VVCFVDDLAHNLDAAHEALS--Q-LPVIHMLRGERDHIPKLAHRVKSWNDIE  195 (197)
T ss_pred             ccHHHHHHHHHHhC--CC---cEEEeCCCHHHHHHHHHHHc--C-CcEEEecchhhccccchhhhhccHHHHh
Confidence            46788999999999  44   899999999997765553 1  1 22455544432  234557777766654

2 hypothetical protein; Provisional

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=91.93  E-value=0.096  Score=44.02  Aligned_cols=64  Identities=20%  Similarity=0.343  Sum_probs=45.3

Q ss_pred             CHHHHHHHHHHhc-CCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCce-EEEEecC--C-C-CccceEEeCChhHHHHH
Q 040896          203 DKGRALEYLLDTF-GFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGY-PIIVSSV--P-R-ETKALYSLRDPDEVMSF  274 (288)
Q Consensus       203 sKg~al~~l~~~~-~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~-~v~v~na--~-~-~~~A~~~~~~~~~v~~~  274 (288)
                      -+....+..++.+ +++++   +++++||+. +|+.+=+.+     |. ++.+...  . . ...+++++++..++..+
T Consensus       153 P~~~~~~~~~~~~~~~~~~---~~v~igD~~~~di~~A~~~-----G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~  223 (224)
T TIGR02254       153 PDKEIFNYALERMPKFSKE---EVLMIGDSLTADIKGGQNA-----GLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEI  223 (224)
T ss_pred             CCHHHHHHHHHHhcCCCch---heEEECCCcHHHHHHHHHC-----CCcEEEECCCCCCCCCCCCCceEECCHHHHHhh
Confidence            4456788888999 99887   999999997 898877766     54 3444322  1 1 23567788888877654

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=91.87  E-value=0.14  Score=44.66  Aligned_cols=14  Identities=29%  Similarity=0.408  Sum_probs=13.2

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .++|+||+||||++
T Consensus         4 ~k~vIFDlDGTLiD   17 (267)
T PRK13478          4 IQAVIFDWAGTTVD   17 (267)
T ss_pred             eEEEEEcCCCCeec
Confidence            58999999999999

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=91.81  E-value=0.065  Score=47.15  Aligned_cols=16  Identities=31%  Similarity=0.567  Sum_probs=14.1

Q ss_pred             CCcEEEEEecCCcccc
Q 040896           19 GKKIVVFLDYDGTLSP   34 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~   34 (288)
                      +..+.++||+||||++
T Consensus        60 ~~~k~vIFDlDGTLiD   75 (273)
T PRK13225         60 QTLQAIIFDFDGTLVD   75 (273)
T ss_pred             hhcCEEEECCcCcccc
Confidence            3468899999999999

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=91.66  E-value=0.34  Score=39.63  Aligned_cols=15  Identities=53%  Similarity=0.906  Sum_probs=12.6

Q ss_pred             CcEEEEEecCCcccc
Q 040896           20 KKIVVFLDYDGTLSP   34 (288)
Q Consensus        20 ~~~li~~DlDGTL~~   34 (288)
                      ++..||+|+|||.+-
T Consensus         2 kk~vi~sDFDGTITl   16 (220)
T COG4359           2 KKPVIFSDFDGTITL   16 (220)
T ss_pred             CceEEEecCCCceEe
Confidence            457899999999884

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=91.65  E-value=0.076  Score=46.65  Aligned_cols=29  Identities=28%  Similarity=0.290  Sum_probs=20.8

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF   58 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~   58 (288)
                      .++|+||+||||++.     .    +...+++.++.+.
T Consensus        13 ~k~viFDlDGTL~Ds-----~----~~~~~a~~~~~~~   41 (272)
T PRK13223         13 PRLVMFDLDGTLVDS-----V----PDLAAAVDRMLLE   41 (272)
T ss_pred             CCEEEEcCCCccccC-----H----HHHHHHHHHHHHH
Confidence            579999999999993     2    2356666665544

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=91.58  E-value=0.57  Score=40.87  Aligned_cols=66  Identities=12%  Similarity=0.093  Sum_probs=48.5

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCC---CccceEEeCChhHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPR---ETKALYSLRDPDEVMSFLR  276 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~---~~~A~~~~~~~~~v~~~l~  276 (288)
                      -+.......+++++++++   ++++|||+.+|+.+=+.+     |+ +|++.+...   ...|++++.+..++..++-
T Consensus       166 P~Pe~~~~a~~~l~~~p~---~~l~IgDs~~Di~aA~~a-----G~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~  235 (260)
T PLN03243        166 PDPEMFMYAAERLGFIPE---RCIVFGNSNSSVEAAHDG-----CMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDL  235 (260)
T ss_pred             CCHHHHHHHHHHhCCChH---HeEEEcCCHHHHHHHHHc-----CCEEEEEecCCchhhhccCCEEeCCHHHHHHHHH
Confidence            346788899999999887   999999999998877776     54 455543221   1468888898887655543

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=91.53  E-value=0.075  Score=45.30  Aligned_cols=29  Identities=28%  Similarity=0.291  Sum_probs=20.2

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF   58 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~   58 (288)
                      .+.++||+||||++.     .    +...++++.+.+.
T Consensus        12 ~k~viFD~DGTL~Ds-----~----~~~~~a~~~~~~~   40 (229)
T PRK13226         12 PRAVLFDLDGTLLDS-----A----PDMLATVNAMLAA   40 (229)
T ss_pred             CCEEEEcCcCccccC-----H----HHHHHHHHHHHHH
Confidence            478999999999993     2    2345566655544

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=91.44  E-value=0.16  Score=44.36  Aligned_cols=19  Identities=16%  Similarity=0.263  Sum_probs=16.3

Q ss_pred             hhcCCcEEEEEecCCcccc
Q 040896           16 AAKGKKIVVFLDYDGTLSP   34 (288)
Q Consensus        16 ~~~~~~~li~~DlDGTL~~   34 (288)
                      ......++|+|||||||++
T Consensus        19 ~~~~~~k~vIFDlDGTLvD   37 (260)
T PLN03243         19 RLGCGWLGVVLEWEGVIVE   37 (260)
T ss_pred             HhcCCceEEEEeCCCceeC
Confidence            3456789999999999998

>PRK11587 putative phosphatase; Provisional

Probab=91.32  E-value=0.51  Score=39.75  Aligned_cols=29  Identities=24%  Similarity=0.123  Sum_probs=19.9

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF   58 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~   58 (288)
                      .+.++||+||||++.     .    +...++++++.+.
T Consensus         3 ~k~viFDlDGTL~Ds-----~----~~~~~a~~~~~~~   31 (218)
T PRK11587          3 CKGFLFDLDGTLVDS-----L----PAVERAWSNWADR   31 (218)
T ss_pred             CCEEEEcCCCCcCcC-----H----HHHHHHHHHHHHH
Confidence            578999999999993     2    2345555555544

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=91.12  E-value=0.48  Score=40.89  Aligned_cols=15  Identities=40%  Similarity=0.510  Sum_probs=13.8

Q ss_pred             CcEEEEEecCCcccc
Q 040896           20 KKIVVFLDYDGTLSP   34 (288)
Q Consensus        20 ~~~li~~DlDGTL~~   34 (288)
                      +.+.|+||+||||++
T Consensus        21 ~~k~viFDlDGTLiD   35 (248)
T PLN02770         21 PLEAVLFDVDGTLCD   35 (248)
T ss_pred             ccCEEEEcCCCccCc
Confidence            568999999999999

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=90.99  E-value=0.11  Score=44.04  Aligned_cols=43  Identities=12%  Similarity=0.014  Sum_probs=31.7

Q ss_pred             HHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecC
Q 040896          206 RALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSV  255 (288)
Q Consensus       206 ~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na  255 (288)
                      ..-..-++++|++++   +.++|.||.+.+..-..+.    -..|.+.+.
T Consensus       146 d~yL~Aa~~Lgv~P~---~CvviEDs~~Gi~Aa~aAG----m~vv~v~~~  188 (221)
T COG0637         146 DIYLLAAERLGVDPE---ECVVVEDSPAGIQAAKAAG----MRVVGVPAG  188 (221)
T ss_pred             HHHHHHHHHcCCChH---HeEEEecchhHHHHHHHCC----CEEEEecCC
Confidence            344455566888888   9999999999999888882    345666653

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=90.82  E-value=0.22  Score=42.02  Aligned_cols=15  Identities=47%  Similarity=0.837  Sum_probs=13.9

Q ss_pred             CcEEEEEecCCcccc
Q 040896           20 KKIVVFLDYDGTLSP   34 (288)
Q Consensus        20 ~~~li~~DlDGTL~~   34 (288)
                      .+++.+||+||||++
T Consensus         4 ~~~la~FDfDgTLt~   18 (210)
T TIGR01545         4 AKRIIFFDLDGTLHQ   18 (210)
T ss_pred             cCcEEEEcCCCCCcc
Confidence            579999999999998

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=90.55  E-value=0.21  Score=40.64  Aligned_cols=36  Identities=14%  Similarity=0.117  Sum_probs=31.3

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      -+....+..+++++++++   ++++|||+.+|+.+-+.+
T Consensus       142 p~p~~~~~~~~~~~~~~~---~~v~vgD~~~di~aA~~a  177 (185)
T TIGR01990       142 PDPEIFLAAAEGLGVSPS---ECIGIEDAQAGIEAIKAA  177 (185)
T ss_pred             CChHHHHHHHHHcCCCHH---HeEEEecCHHHHHHHHHc
Confidence            567788899999999877   999999999998877776

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK09449 dUMP phosphatase; Provisional

Probab=90.27  E-value=1.1  Score=37.64  Aligned_cols=65  Identities=17%  Similarity=0.204  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHhcCCC-CCCCceeEEEcCCc-ccHHHHHHHHhcCCce-EEEEec-CCC---CccceEEeCChhHHHHHHH
Q 040896          204 KGRALEYLLDTFGFN-NASDFLPLYIGDDK-TDEDAFKVIRHMGRGY-PIIVSS-VPR---ETKALYSLRDPDEVMSFLR  276 (288)
Q Consensus       204 Kg~al~~l~~~~~~~-~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~-~v~v~n-a~~---~~~A~~~~~~~~~v~~~l~  276 (288)
                      +......+++.+|+. .+   +++++||+. +|+..=+.+     |+ ++.+.. +..   ...+++++++..++.++|+
T Consensus       152 ~p~~~~~~~~~~~~~~~~---~~~~vgD~~~~Di~~A~~a-----G~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~  223 (224)
T PRK09449        152 DVAIFDYALEQMGNPDRS---RVLMVGDNLHSDILGGINA-----GIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC  223 (224)
T ss_pred             CHHHHHHHHHHcCCCCcc---cEEEEcCCcHHHHHHHHHC-----CCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence            456788889999874 35   899999997 798876666     55 455542 211   2357888899988887764

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=90.23  E-value=0.52  Score=41.73  Aligned_cols=24  Identities=25%  Similarity=0.415  Sum_probs=18.5

Q ss_pred             HHHHHhh-cCCcEEEEEecCCcccc
Q 040896           11 DRMVAAA-KGKKIVVFLDYDGTLSP   34 (288)
Q Consensus        11 ~~~~~~~-~~~~~li~~DlDGTL~~   34 (288)
                      .++.++. ..+.++|+||+||||++
T Consensus        29 ~~~~~~~~~~~~k~VIFDlDGTLvD   53 (286)
T PLN02779         29 ARVASASASALPEALLFDCDGVLVE   53 (286)
T ss_pred             hhhhhhccccCCcEEEEeCceeEEc
Confidence            3555664 34568999999999999

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=90.22  E-value=0.18  Score=42.56  Aligned_cols=41  Identities=7%  Similarity=0.064  Sum_probs=34.1

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEE
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPII  251 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~  251 (288)
                      -+.......++.++++++   +++++||+.+|+..=+.+     |..+.
T Consensus       143 P~p~~~~~a~~~~~~~p~---~~l~igDs~~di~aA~~a-----G~~~i  183 (221)
T PRK10563        143 PDPALMFHAAEAMNVNVE---NCILVDDSSAGAQSGIAA-----GMEVF  183 (221)
T ss_pred             CChHHHHHHHHHcCCCHH---HeEEEeCcHhhHHHHHHC-----CCEEE
Confidence            467899999999999877   999999999998876666     66543

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=90.13  E-value=0.1  Score=43.42  Aligned_cols=25  Identities=32%  Similarity=0.307  Sum_probs=16.9

Q ss_pred             EEEecCCccccCcCCCCCCCCCHHHHHHHHHHhh
Q 040896           24 VFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAH   57 (288)
Q Consensus        24 i~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~   57 (288)
                      ++||+||||++.     .    +...+++++..+
T Consensus         1 iiFDlDGTL~Ds-----~----~~~~~~~~~~~~   25 (205)
T TIGR01454         1 VVFDLDGVLVDS-----F----AVMREAFAIAYR   25 (205)
T ss_pred             CeecCcCccccC-----H----HHHHHHHHHHHH
Confidence            589999999993     2    345556655543

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=90.05  E-value=0.12  Score=40.88  Aligned_cols=35  Identities=17%  Similarity=0.250  Sum_probs=28.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      .+...+.++++++++++    +++++||+.+|+.+=+.+
T Consensus       119 p~~~~~~~~~~~~~~~~----~~l~iGDs~~Di~aa~~a  153 (154)
T TIGR01549       119 PEPEIFLAALESLGLPP----EVLHVGDNLNDIEGARNA  153 (154)
T ss_pred             cCHHHHHHHHHHcCCCC----CEEEEeCCHHHHHHHHHc
Confidence            46788999999999863    799999999998765543

HAD subfamilies caused by an overly broad single model.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=89.99  E-value=0.22  Score=40.19  Aligned_cols=31  Identities=19%  Similarity=0.169  Sum_probs=25.6

Q ss_pred             HHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHH
Q 040896          205 GRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAF  238 (288)
Q Consensus       205 g~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml  238 (288)
                      ...-+..++.+|++++   +++++||+..|+..=
T Consensus       142 p~~f~~~~~~~~~~p~---~~l~vgD~~~Di~~A  172 (175)
T TIGR01493       142 PVVYELVFDTVGLPPD---RVLMVAAHQWDLIGA  172 (175)
T ss_pred             HHHHHHHHHHHCCCHH---HeEeEecChhhHHHH
Confidence            5556788888999887   999999999998753

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=89.92  E-value=0.84  Score=38.20  Aligned_cols=14  Identities=21%  Similarity=0.325  Sum_probs=12.7

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .++++||+||||++
T Consensus         1 ~k~viFD~DGTL~d   14 (224)
T TIGR02254         1 YKTLLFDLDDTILD   14 (224)
T ss_pred             CCEEEEcCcCcccc
Confidence            37899999999999

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=89.62  E-value=0.88  Score=36.99  Aligned_cols=48  Identities=23%  Similarity=0.234  Sum_probs=35.8

Q ss_pred             EEEEEecCCccccCcC---CCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCCh
Q 040896           22 IVVFLDYDGTLSPIVE---DPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCL   69 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~---~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~   69 (288)
                      +++|+|.||||.....   .+.+-.+.|.+.++|++|++.+ +++|+|..+.
T Consensus         2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~   53 (176)
T TIGR00213         2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSG   53 (176)
T ss_pred             CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence            7899999999994211   1123345678999999999885 8898887664

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=89.30  E-value=0.12  Score=43.10  Aligned_cols=11  Identities=55%  Similarity=0.854  Sum_probs=10.2

Q ss_pred             EEEecCCcccc
Q 040896           24 VFLDYDGTLSP   34 (288)
Q Consensus        24 i~~DlDGTL~~   34 (288)
                      ++||+||||++
T Consensus         1 viFD~DGTL~D   11 (213)
T TIGR01449         1 VLFDLDGTLVD   11 (213)
T ss_pred             CeecCCCcccc
Confidence            58999999998

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>KOG0206 consensus P-type ATPase [General function prediction only]

Probab=89.22  E-value=0.26  Score=51.23  Aligned_cols=33  Identities=18%  Similarity=0.252  Sum_probs=25.1

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      =|+.-++.+.+..+.      .++++||+.||++|++.+
T Consensus       781 QKA~Vv~lVk~~~~~------~TLAIGDGANDVsMIQ~A  813 (1151)
T KOG0206|consen  781 QKALVVKLVKKGLKA------VTLAIGDGANDVSMIQEA  813 (1151)
T ss_pred             HHHHHHHHHHhcCCc------eEEEeeCCCccchheeeC
Confidence            466666666433332      899999999999999988

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=89.09  E-value=1  Score=37.77  Aligned_cols=33  Identities=21%  Similarity=0.284  Sum_probs=20.7

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF   58 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~   58 (288)
                      .++++||+||||++.     ...+......+.+.+.+.
T Consensus         2 ~~~viFDlDGTL~ds-----~~~~~~~~~~~~~~~~~~   34 (221)
T TIGR02253         2 IKAIFFDLDDTLIDT-----SGLAEKARRNAIEVLIEA   34 (221)
T ss_pred             ceEEEEeCCCCCcCC-----CCccCHHHHHHHHHHHHC
Confidence            478999999999993     333333333344445444

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK09449 dUMP phosphatase; Provisional

Probab=88.79  E-value=0.22  Score=41.99  Aligned_cols=14  Identities=29%  Similarity=0.183  Sum_probs=12.9

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .+.|+||+||||++
T Consensus         3 ~k~iiFDlDGTLid   16 (224)
T PRK09449          3 YDWILFDADETLFH   16 (224)
T ss_pred             ccEEEEcCCCchhc
Confidence            57899999999997

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=88.73  E-value=1.3  Score=41.93  Aligned_cols=66  Identities=20%  Similarity=0.187  Sum_probs=48.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCC--C--CccceEEeCChhHHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVP--R--ETKALYSLRDPDEVMSFLRR  277 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~--~--~~~A~~~~~~~~~v~~~l~~  277 (288)
                      .|...+...++.++.  +   ++++|||+.+|+.+-+.+     |. ++.+....  .  ...+++++++..++..++..
T Consensus       386 ~kP~~~~~al~~l~~--~---~~v~VGDs~~Di~aAk~A-----G~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~  455 (459)
T PRK06698        386 NKSDLVKSILNKYDI--K---EAAVVGDRLSDINAAKDN-----GLIAIGCNFDFAQEDELAQADIVIDDLLELKGILST  455 (459)
T ss_pred             CCcHHHHHHHHhcCc--c---eEEEEeCCHHHHHHHHHC-----CCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHH
Confidence            456677788877654  4   999999999999988887     54 56664432  1  24688999999988887755


Q ss_pred             H
Q 040896          278 L  278 (288)
Q Consensus       278 ~  278 (288)
                      +
T Consensus       456 ~  456 (459)
T PRK06698        456 V  456 (459)
T ss_pred             H
Confidence            4

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=88.68  E-value=0.62  Score=35.96  Aligned_cols=47  Identities=11%  Similarity=0.048  Sum_probs=40.6

Q ss_pred             EEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhc
Q 040896           24 VFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        24 i~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~   76 (288)
                      .+-++++|+..      .+.+-++..+.|++|++...|+|+||-....+.+..
T Consensus        17 ~~~~v~~tiat------gGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~la   63 (152)
T COG4087          17 KAGKVLYTIAT------GGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLA   63 (152)
T ss_pred             ecceEEEEEcc------CcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHH
Confidence            45688999887      567888999999999998999999999998888764

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=88.61  E-value=0.21  Score=47.29  Aligned_cols=29  Identities=17%  Similarity=0.308  Sum_probs=19.3

Q ss_pred             EEEEEecCCccccCcCCCCCCCCCHHHHHHHHHH
Q 040896           22 IVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV   55 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L   55 (288)
                      +.++||+||||++     +...+.....++++++
T Consensus       242 k~vIFDlDGTLiD-----s~~~~~~a~~~~~~~~  270 (459)
T PRK06698        242 QALIFDMDGTLFQ-----TDKILELSLDDTFDHL  270 (459)
T ss_pred             hheeEccCCceec-----chhHHHHHHHHHHHHH
Confidence            7899999999999     3333344444555444

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=88.38  E-value=0.25  Score=40.81  Aligned_cols=35  Identities=14%  Similarity=0.225  Sum_probs=30.2

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      +....+.++++++++++   ++++|||+.+|+..-+.+
T Consensus       150 ~~~~~~~~~~~~~~~p~---~~~~vgD~~~Di~~A~~~  184 (198)
T TIGR01428       150 APQVYQLALEALGVPPD---EVLFVASNPWDLGGAKKF  184 (198)
T ss_pred             CHHHHHHHHHHhCCChh---hEEEEeCCHHHHHHHHHC
Confidence            46778899999999887   999999999998876666

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=87.37  E-value=0.75  Score=44.59  Aligned_cols=75  Identities=13%  Similarity=0.151  Sum_probs=48.8

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCC---------CHHHHHHHHHHhhcC-CEEEEcCCChhhH---hhhcC-CCCeEEEc
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFM---------SDTMRMAVHEVAHFF-PTAIVSGRCLDKV---SRFVQ-LKNVVYAG   85 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i---------~~~~~~aL~~L~~~~-~v~i~TGR~~~~l---~~~~~-~~~~~~i~   85 (288)
                      ..++|++|+|||++..+.   -+.+         +...-+...++.+++ +++.+|.|+....   +.+|. +...+...
T Consensus       529 n~kIVISDIDGTITKSDv---LGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~L  605 (738)
T KOG2116|consen  529 NDKIVISDIDGTITKSDV---LGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKL  605 (738)
T ss_pred             CCcEEEecCCCceEhhhh---hhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccC
Confidence            468999999999997331   1111         345567777888887 8999999998643   33442 33333444


Q ss_pred             cCceeEeCCCCC
Q 040896           86 SHGMDISTPAGS   97 (288)
Q Consensus        86 ~nGa~i~~~~~~   97 (288)
                      -.|=+|..|++.
T Consensus       606 PdGPViLSPd~l  617 (738)
T KOG2116|consen  606 PDGPVILSPDSL  617 (738)
T ss_pred             CCCCEEeCCCcc
Confidence            456666666554

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=87.34  E-value=0.57  Score=37.75  Aligned_cols=47  Identities=19%  Similarity=0.174  Sum_probs=33.3

Q ss_pred             EEEEEecCCccccCcC------CCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCC
Q 040896           22 IVVFLDYDGTLSPIVE------DPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRC   68 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~------~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~   68 (288)
                      +++|||.||||.....      .+..-.+-+.+.++|++|++++ +++|+|-.+
T Consensus         2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~   55 (161)
T TIGR01261         2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQD   55 (161)
T ss_pred             CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCc
Confidence            7899999999997321      0112234467899999999885 788887653

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PLN02645 phosphoglycolate phosphatase

Probab=87.06  E-value=2.5  Score=37.88  Aligned_cols=66  Identities=17%  Similarity=0.189  Sum_probs=48.3

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCc-eEEEEecCC--CC--------ccceEEeCChhH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRG-YPIIVSSVP--RE--------TKALYSLRDPDE  270 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g-~~v~v~na~--~~--------~~A~~~~~~~~~  270 (288)
                      -+...++.++++++++.+   +++++||+. +|+.+=+.+     | .++.|..+.  .+        ..+++++++..+
T Consensus       231 P~p~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~A~~a-----G~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~  302 (311)
T PLN02645        231 PSTFMMDYLANKFGIEKS---QICMVGDRLDTDILFGQNG-----GCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISD  302 (311)
T ss_pred             ChHHHHHHHHHHcCCCcc---cEEEEcCCcHHHHHHHHHc-----CCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHH
Confidence            345577788888999887   999999996 999887777     4 356664432  11        246788888888


Q ss_pred             HHHHHH
Q 040896          271 VMSFLR  276 (288)
Q Consensus       271 v~~~l~  276 (288)
                      +.++++
T Consensus       303 l~~~~~  308 (311)
T PLN02645        303 FLTLKA  308 (311)
T ss_pred             HHHHhh
Confidence            877665

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=87.00  E-value=0.68  Score=44.28  Aligned_cols=40  Identities=28%  Similarity=0.292  Sum_probs=30.0

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEec
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSS  254 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~n  254 (288)
                      .|-.+++   +.++.+..   . ++.|||.||.+||+.+     +.+++|..
T Consensus       176 ~Kv~rl~---~~~g~~~~---~-~aYgDS~sD~plL~~a-----~e~y~V~~  215 (497)
T PLN02177        176 HKRDAVL---KEFGDALP---D-LGLGDRETDHDFMSIC-----KEGYMVPR  215 (497)
T ss_pred             HHHHHHH---HHhCCCCc---e-EEEECCccHHHHHHhC-----CccEEeCC
Confidence            3666666   55564432   4 8999999999999999     56777766

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=86.78  E-value=1.2  Score=34.04  Aligned_cols=36  Identities=31%  Similarity=0.347  Sum_probs=31.7

Q ss_pred             CHHHHHHHHHHhc-CCCCCCCceeEEEcC-CcccHHHHHHH
Q 040896          203 DKGRALEYLLDTF-GFNNASDFLPLYIGD-DKTDEDAFKVI  241 (288)
Q Consensus       203 sKg~al~~l~~~~-~~~~~~~~~vv~~GD-s~ND~~Ml~~~  241 (288)
                      .|...++.+++.+ +++++   +++++|| +.+|+.+-+.+
T Consensus        86 P~~~~~~~~~~~~~~~~~~---~~v~IGD~~~~Di~~A~~~  123 (132)
T TIGR01662        86 PKPGMFLEALKRFNEIDPE---ESVYVGDQDLTDLQAAKRA  123 (132)
T ss_pred             CChHHHHHHHHHcCCCChh---heEEEcCCCcccHHHHHHC
Confidence            5778999999999 59887   9999999 79999887776

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=85.94  E-value=1.1  Score=39.83  Aligned_cols=51  Identities=12%  Similarity=0.092  Sum_probs=36.6

Q ss_pred             hHHHHHHhh----cCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc-C----CEEEEc
Q 040896            9 TFDRMVAAA----KGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF-F----PTAIVS   65 (288)
Q Consensus         9 ~~~~~~~~~----~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~-~----~v~i~T   65 (288)
                      .|-++....    +.+.-.|+||+||.|+.      .+++-+...+||+.|.++ +    ++++.|
T Consensus        19 ~~~kf~~~~s~~ss~~~fgfafDIDGVL~R------G~~~i~~~~~Alr~L~~~~g~lkIP~vfLT   78 (389)
T KOG1618|consen   19 PMRKFISEISFESSPPTFGFAFDIDGVLFR------GHRPIPGALKALRRLVDNQGQLKIPFVFLT   78 (389)
T ss_pred             chhhhhcccCCCCCCCceeEEEecccEEEe------cCCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence            345555553    34668899999999998      345667889999999877 2    556655

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=85.48  E-value=0.74  Score=37.32  Aligned_cols=27  Identities=22%  Similarity=0.349  Sum_probs=19.4

Q ss_pred             EEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc
Q 040896           23 VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF   58 (288)
Q Consensus        23 li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~   58 (288)
                      +++||+||||++.         .+...++++++.+.
T Consensus         1 ~iiFD~DGTL~ds---------~~~~~~~~~~~~~~   27 (185)
T TIGR01990         1 AVIFDLDGVITDT---------AEYHYLAWKALADE   27 (185)
T ss_pred             CeEEcCCCccccC---------hHHHHHHHHHHHHH
Confidence            4799999999993         23456666666655

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=85.39  E-value=3.3  Score=35.99  Aligned_cols=46  Identities=20%  Similarity=0.113  Sum_probs=39.0

Q ss_pred             EEEEEecCCccccCcCCCCCC---CCCHHHHHHHHHHhhcC-CEEEEcCCChhhH
Q 040896           22 IVVFLDYDGTLSPIVEDPDKA---FMSDTMRMAVHEVAHFF-PTAIVSGRCLDKV   72 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~~~~---~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l   72 (288)
                      ++|+||+||||++.     ..   .+.+.+.++|++|++.+ +++++|||+....
T Consensus         2 k~i~~D~DGtl~~~-----~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~   51 (257)
T TIGR01458         2 KGVLLDISGVLYIS-----DAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESK   51 (257)
T ss_pred             CEEEEeCCCeEEeC-----CCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCH
Confidence            68999999999983     33   27789999999999995 8999999888753

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=85.33  E-value=0.48  Score=39.56  Aligned_cols=34  Identities=12%  Similarity=0.258  Sum_probs=29.2

Q ss_pred             HHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          205 GRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       205 g~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      ....+.+++++|++++   ++++|||+..|+.+=+.+
T Consensus       155 p~~~~~~~~~~g~~~~---~~l~i~D~~~di~aA~~a  188 (211)
T TIGR02247       155 PRIYQLMLERLGVAPE---ECVFLDDLGSNLKPAAAL  188 (211)
T ss_pred             HHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHc
Confidence            5578888999999887   999999999998877766

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PRK08238 hypothetical protein; Validated

Probab=85.25  E-value=1  Score=42.86  Aligned_cols=43  Identities=26%  Similarity=0.322  Sum_probs=31.4

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCC
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVP  256 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~  256 (288)
                      +..|...++   +.++..     .+.++||+.+|++|++.+     +.+++|++..
T Consensus       126 g~~K~~~l~---~~l~~~-----~~~yvGDS~~Dlp~~~~A-----~~av~Vn~~~  168 (479)
T PRK08238        126 GAAKAAALV---EAFGER-----GFDYAGNSAADLPVWAAA-----RRAIVVGASP  168 (479)
T ss_pred             CchHHHHHH---HHhCcc-----CeeEecCCHHHHHHHHhC-----CCeEEECCCH
Confidence            345755544   555532     567889999999999999     6888887654

>COG4996 Predicted phosphatase [General function prediction only]

Probab=84.30  E-value=1.2  Score=34.33  Aligned_cols=14  Identities=29%  Similarity=0.223  Sum_probs=12.3

Q ss_pred             EEEEEecCCccccC
Q 040896           22 IVVFLDYDGTLSPI   35 (288)
Q Consensus        22 ~li~~DlDGTL~~~   35 (288)
                      ++|+||.||||.++
T Consensus         1 ~~i~~d~d~t~wdh   14 (164)
T COG4996           1 RAIVFDADKTLWDH   14 (164)
T ss_pred             CcEEEeCCCccccc
Confidence            47999999999984

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=84.22  E-value=0.9  Score=38.33  Aligned_cols=87  Identities=17%  Similarity=0.188  Sum_probs=54.9

Q ss_pred             CceEEEEeCCCCCCHHHHHHHHHHhc---CCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEec--------CCC-
Q 040896          190 GKKVMEIRPCIDWDKGRALEYLLDTF---GFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSS--------VPR-  257 (288)
Q Consensus       190 ~~~~ieI~~~~~~sKg~al~~l~~~~---~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~n--------a~~-  257 (288)
                      ........|+ +.=||.-+..+....   |+..+   +++++||+.||+--....+.  ..|++.-.|        +.+ 
T Consensus       151 ~~hsC~~CPs-NmCKg~Vl~~~~~s~~~~gv~ye---r~iYvGDG~nD~CP~l~Lr~--~D~ampRkgfpl~k~~~~~p~  224 (256)
T KOG3120|consen  151 TQHSCNLCPS-NMCKGLVLDELVASQLKDGVRYE---RLIYVGDGANDFCPVLRLRA--CDVAMPRKGFPLWKLISANPM  224 (256)
T ss_pred             CCCccCcCch-hhhhhHHHHHHHHHHhhcCCcee---eEEEEcCCCCCcCcchhccc--CceecccCCCchHhhhhcCcc
Confidence            3456677899 999999999998765   55555   99999999999854333321  122222121        111 


Q ss_pred             CccceEEe-CChhHHHHHHHHHHHHh
Q 040896          258 ETKALYSL-RDPDEVMSFLRRLARWK  282 (288)
Q Consensus       258 ~~~A~~~~-~~~~~v~~~l~~~~~~~  282 (288)
                      .-+|..+. ++..++.+.|.+++..-
T Consensus       225 ~~kasV~~W~sg~d~~~~L~~lik~~  250 (256)
T KOG3120|consen  225 LLKASVLEWSSGEDLERILQQLIKTI  250 (256)
T ss_pred             eeeeeEEecccHHHHHHHHHHHHHHh
Confidence            12455443 46778888887776543

>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]

Probab=84.17  E-value=2.5  Score=42.46  Aligned_cols=37  Identities=19%  Similarity=0.159  Sum_probs=30.1

Q ss_pred             eeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC---CccceEEe
Q 040896          224 LPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR---ETKALYSL  265 (288)
Q Consensus       224 ~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~---~~~A~~~~  265 (288)
                      -|.+-||+.||-|.|+.+     ..|||||=+..   +.+|+.++
T Consensus       707 iVaVTGDGVNDsPALKKA-----DIGVAMGiaGSDvsKqAADmIL  746 (1019)
T KOG0203|consen  707 IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDVSKQAADMIL  746 (1019)
T ss_pred             EEEEeCCCcCCChhhccc-----ccceeeccccchHHHhhcceEE
Confidence            577889999999999999     59999976632   56788774

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=84.04  E-value=1.1  Score=35.28  Aligned_cols=36  Identities=22%  Similarity=0.245  Sum_probs=30.8

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      -|...++.+++.++++++   +++++||+..|+.+-+.+
T Consensus       102 P~~~~~~~~~~~~~~~~~---e~i~IGDs~~Di~~A~~~  137 (147)
T TIGR01656       102 PKPGLILEALKRLGVDAS---RSLVVGDRLRDLQAARNA  137 (147)
T ss_pred             CCHHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHC
Confidence            567789999999999887   999999999998766665

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PHA02597 30

Probab=83.76  E-value=1.9  Score=35.50  Aligned_cols=14  Identities=36%  Similarity=0.515  Sum_probs=12.8

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .++++||+||||++
T Consensus         2 ~k~viFDlDGTLiD   15 (197)
T PHA02597          2 KPTILTDVDGVLLS   15 (197)
T ss_pred             CcEEEEecCCceEc
Confidence            47899999999999

2 hypothetical protein; Provisional

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=83.42  E-value=0.52  Score=39.04  Aligned_cols=49  Identities=10%  Similarity=0.172  Sum_probs=28.8

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcC--CcccHHHHHHHHhcC--CceEEEEecC
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGD--DKTDEDAFKVIRHMG--RGYPIIVSSV  255 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GD--s~ND~~Ml~~~~~~~--~g~~v~v~na  255 (288)
                      +....+..+++.+|+..    .+++.+.  +.++-.+++.+.+++  .+..+++|.+
T Consensus       152 D~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg  204 (215)
T PF00702_consen  152 DNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDG  204 (215)
T ss_dssp             SEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESS
T ss_pred             ccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEEEccC
Confidence            44556677788899952    4455555  666664555555543  1345666654

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=83.25  E-value=1.3  Score=37.43  Aligned_cols=55  Identities=16%  Similarity=0.252  Sum_probs=36.2

Q ss_pred             HHHHHHHHHhcCCC-CCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCCccceEEeC
Q 040896          205 GRALEYLLDTFGFN-NASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRETKALYSLR  266 (288)
Q Consensus       205 g~al~~l~~~~~~~-~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~~~A~~~~~  266 (288)
                      -.|-++..+..|+. +.   ++++|-||.+-+.-=+.+   | -.++.++-.....-+++++.
T Consensus       163 ~~afE~a~k~agi~~p~---~t~FfDDS~~NI~~ak~v---G-l~tvlv~~~~~~~~~d~~l~  218 (244)
T KOG3109|consen  163 EEAFEKAMKVAGIDSPR---NTYFFDDSERNIQTAKEV---G-LKTVLVGREHKIKGVDYALE  218 (244)
T ss_pred             HHHHHHHHHHhCCCCcC---ceEEEcCchhhHHHHHhc---c-ceeEEEEeeecccchHHHHH
Confidence            45778888888987 56   999999998876644444   2 24677775543334444443

>PLN02940 riboflavin kinase

Probab=82.76  E-value=2.3  Score=39.28  Aligned_cols=61  Identities=18%  Similarity=0.086  Sum_probs=45.0

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCC----CccceEEeCChhHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPR----ETKALYSLRDPDEV  271 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~----~~~A~~~~~~~~~v  271 (288)
                      -+.......++.++++++   ++++|||+.+|+.+-+.+     |. .+.+.....    ..-+++++++..++
T Consensus       151 P~p~~~~~a~~~lgv~p~---~~l~VGDs~~Di~aA~~a-----Gi~~I~v~~g~~~~~~~~~ad~~i~sl~el  216 (382)
T PLN02940        151 PSPDIFLEAAKRLNVEPS---NCLVIEDSLPGVMAGKAA-----GMEVIAVPSIPKQTHLYSSADEVINSLLDL  216 (382)
T ss_pred             CCHHHHHHHHHHcCCChh---HEEEEeCCHHHHHHHHHc-----CCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence            457889999999999988   999999999998877776     54 455654321    23566777776654

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=82.47  E-value=0.81  Score=38.46  Aligned_cols=63  Identities=19%  Similarity=0.406  Sum_probs=41.8

Q ss_pred             HHHHHHHHhcCCCCCCCceeEEEcCC-cccHHHHHHHHhcCCce-EEEEecCCC-----CccceEEeCChhHHHHHHH
Q 040896          206 RALEYLLDTFGFNNASDFLPLYIGDD-KTDEDAFKVIRHMGRGY-PIIVSSVPR-----ETKALYSLRDPDEVMSFLR  276 (288)
Q Consensus       206 ~al~~l~~~~~~~~~~~~~vv~~GDs-~ND~~Ml~~~~~~~~g~-~v~v~na~~-----~~~A~~~~~~~~~v~~~l~  276 (288)
                      ..=+.+++++|++++   +++++||+ .||+..-..+     |+ +|.+.....     ....++.+.+..++...++
T Consensus       158 ~~f~~~~~~~g~~p~---~~l~VgD~~~~di~gA~~~-----G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~  227 (229)
T COG1011         158 EIFEYALEKLGVPPE---EALFVGDSLENDILGARAL-----GMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLE  227 (229)
T ss_pred             HHHHHHHHHcCCCcc---eEEEECCChhhhhHHHHhc-----CcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHh
Confidence            456778888999887   99999999 7775544444     44 454443321     1345666677777776664

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=81.36  E-value=6.1  Score=33.02  Aligned_cols=48  Identities=15%  Similarity=0.032  Sum_probs=27.9

Q ss_pred             HHHHHHHhcCCCCCCCceeEEEcCCc---ccHHHHHHHHhcC---CceEEEEecC
Q 040896          207 ALEYLLDTFGFNNASDFLPLYIGDDK---TDEDAFKVIRHMG---RGYPIIVSSV  255 (288)
Q Consensus       207 al~~l~~~~~~~~~~~~~vv~~GDs~---ND~~Ml~~~~~~~---~g~~v~v~na  255 (288)
                      ..+..++.+|+.. .++.++..++-.   =|-.+|+.+-+.-   ..-++.||..
T Consensus       127 ~~~~~l~~~gl~~-~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~VgD~  180 (229)
T COG1011         127 HQERKLRQLGLLD-YFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFVGDS  180 (229)
T ss_pred             HHHHHHHHcCChh-hhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEEECCC
Confidence            3455566666542 344767666653   1888888886531   1135667764

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=81.22  E-value=1.5  Score=34.55  Aligned_cols=36  Identities=25%  Similarity=0.352  Sum_probs=31.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      .+....+.+++.++++++   ++++|||+..|+.+-..+
T Consensus       134 p~~~~~~~~~~~~~~~p~---~~~~vgD~~~d~~~A~~~  169 (176)
T PF13419_consen  134 PDPDAYRRALEKLGIPPE---EILFVGDSPSDVEAAKEA  169 (176)
T ss_dssp             TSHHHHHHHHHHHTSSGG---GEEEEESSHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHcCCCcc---eEEEEeCCHHHHHHHHHc
Confidence            456889999999999887   999999999998887776

...

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=81.08  E-value=2.1  Score=35.37  Aligned_cols=36  Identities=19%  Similarity=0.383  Sum_probs=29.4

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      -+....+.+++.+|++++   ++++|||+..|+..=+.+
T Consensus       142 P~p~~~~~~~~~~~~~p~---~~l~vgD~~~di~aA~~a  177 (199)
T PRK09456        142 PEARIYQHVLQAEGFSAA---DAVFFDDNADNIEAANAL  177 (199)
T ss_pred             CCHHHHHHHHHHcCCChh---HeEEeCCCHHHHHHHHHc
Confidence            457778888999999988   999999999886655554

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=80.75  E-value=1.6  Score=35.24  Aligned_cols=28  Identities=21%  Similarity=0.210  Sum_probs=19.3

Q ss_pred             EEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc
Q 040896           22 IVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF   58 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~   58 (288)
                      ++|+||+||||++.     .    +....+++++.+.
T Consensus         2 ~~iiFD~DGTL~ds-----~----~~~~~~~~~~~~~   29 (185)
T TIGR02009         2 KAVIFDMDGVIVDT-----A----PLHAQAWKHLADK   29 (185)
T ss_pred             CeEEEcCCCcccCC-----h----HHHHHHHHHHHHH
Confidence            68999999999993     2    2345555555444

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=80.71  E-value=6.2  Score=34.25  Aligned_cols=52  Identities=23%  Similarity=0.326  Sum_probs=37.0

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccH-HHHHHHHhcC-CceEEEEecC
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDE-DAFKVIRHMG-RGYPIIVSSV  255 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~-~Ml~~~~~~~-~g~~v~v~na  255 (288)
                      |.+||.++..++...|..++   .|+++-|+.-.+ .|=+++...+ ..+|+.-.++
T Consensus       160 ~~~KG~~L~~fL~~~~~~pk---~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~  213 (252)
T PF11019_consen  160 GQDKGEVLKYFLDKINQSPK---KIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA  213 (252)
T ss_pred             CCccHHHHHHHHHHcCCCCC---eEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence            89999999999999999888   999999995444 3434444332 2245555544

The function is not known.

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=80.57  E-value=0.74  Score=37.10  Aligned_cols=34  Identities=18%  Similarity=0.224  Sum_probs=29.6

Q ss_pred             HHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          205 GRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       205 g~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      ....+.+++.++++++   ++++|||+..|+.+-+.+
T Consensus       143 ~~~~~~~~~~~~~~~~---~~~~vgD~~~di~aA~~~  176 (183)
T TIGR01509       143 PDIYLLALKKLGLKPE---ECLFVDDSPAGIEAAKAA  176 (183)
T ss_pred             HHHHHHHHHHcCCCcc---eEEEEcCCHHHHHHHHHc
Confidence            6788899999999887   999999999998877666

HAD subfamilies caused by an overly broad single model.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	288
1u02_A	239	Crystal Structure Of Trehalose-6-Phosphate Phosphat		4e-07

>pdb|1U02|A Chain A, Crystal Structure Of Trehalose-6-Phosphate Phosphatase Related Protein Length = 239

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 37/220 (16%)
Query: 23  VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQL--KN 80
           ++FLDYDGTL PI+ +P++++    +   + ++   F T IV+GR  +++SRF+ L    
Sbjct: 3   LIFLDYDGTLVPIIXNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEISRFLPLDINX 62
Query: 81  VVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEK 140
           + Y G+                         +   ++V+   +  FL     + +     
Sbjct: 63  ICYHGA-----------------------CSKINGQIVYNNGSDRFLGVFDRIYEDTRSW 99
Query: 141 IKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIR-PC 199
           +    G  +      +  H      D    L+  +  I   +       GK ++E+R P 
Sbjct: 100 VSDFPGLRIYRKNLAVLYHLGLXGADXKPKLRSRIEEIARIF-GVETYYGKXIIELRVPG 158
Query: 200 IDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFK 239
           +  +KG A+  +          +   +  GDD TDE AF+
Sbjct: 159 V--NKGSAIRSV--------RGERPAIIAGDDATDEAAFE 188

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	288
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	3e-80
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	3e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	6e-07
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	3e-06
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	5e-05
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	6e-05

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239

 Score =  241 bits (618), Expect = 3e-80
 Identities = 54/258 (20%), Positives = 100/258 (38%), Gaps = 36/258 (13%)

Query: 23  VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKNVV 82
           ++FLDYDGTL PI+ +P++++    +   + ++   F T IV+GR  +++SRF+ L ++ 
Sbjct: 3   LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEISRFLPL-DIN 61

Query: 83  YAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIK 142
               HG                           ++V+   +  FL     + +     + 
Sbjct: 62  MICYHGACSKIN--------------------GQIVYNNGSDRFLGVFDRIYEDTRSWVS 101

Query: 143 TIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDW 202
              G  +      +  H   +  D    L+  +  I   +       GK ++E+R     
Sbjct: 102 DFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFG-VETYYGKMIIELRV-PGV 159

Query: 203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRETKAL 262
           +KG A+  +          +   +  GDD TDE AF+          I V     ET A 
Sbjct: 160 NKGSAIRSVRG--------ERPAIIAGDDATDEAAFEANDD---ALTIKVG--EGETHAK 206

Query: 263 YSLRDPDEVMSFLRRLAR 280
           + + D  E+   L+ +  
Sbjct: 207 FHVADYIEMRKILKFIEM 224

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A Length = 246

 Score = 55.3 bits (132), Expect = 3e-09
 Identities = 45/282 (15%), Positives = 84/282 (29%), Gaps = 56/282 (19%)

Query: 15  AAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVS- 73
           +AA G  + +F D DGTL+       +  ++  M   + ++       +V G   +KV  
Sbjct: 1   SAAPGPALCLF-DVDGTLT-----APRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQE 54

Query: 74  ------------RFVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQ 121
                        F +   V Y     +        L +   +           ++   +
Sbjct: 55  QLGNDVVEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPK 114

Query: 122 PAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA 181
               F+     M+ V        +   +E  +     + R+    D+             
Sbjct: 115 KRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLR------KEFAGK 168

Query: 182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKT-----DED 236
              F I  G+   ++ P   WDK   L ++ +         +  +Y   DKT     D +
Sbjct: 169 GLTFSIG-GQISFDVFP-DGWDKRYCLRHVEND-------GYKTIYFFGDKTMPGGNDHE 219

Query: 237 AFKVIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRL 278
            F   R MG                 YS+  P++       L
Sbjct: 220 IFTDPRTMG-----------------YSVTAPEDTRRICELL 244

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.5 bits (130), Expect = 2e-08
 Identities = 59/349 (16%), Positives = 106/349 (30%), Gaps = 100/349 (28%)

Query: 3   HPSALDTFDRMVAAAKGKKIV-VFLDYDGTLSPIVEDPDKAFMSDTMRMAV--HEVAHFF 59
           H   +D F+      + K I+ VF D        V++ D   + D  +  +   E+ H  
Sbjct: 3   HHHHMD-FETGEHQYQYKDILSVFED------AFVDNFDCKDVQDMPKSILSKEEIDHII 55

Query: 60  --PTAIVSGRCL-----DK----VSRFVQLKNVVYAGSHGMDISTPAGSLKQ--NNPKHE 106
               A+     L      K    V +FV+           ++       +K     P   
Sbjct: 56  MSKDAVSGTLRLFWTLLSKQEEMVQKFVE-------EVLRINYKFLMSPIKTEQRQPSMM 108

Query: 107 TRTVDEQGNEVVHFQPAQEFLP---QIQEMIQVLEEKIKTIK-------------GATV- 149
           TR   EQ + +  +   Q F        +    L + +  ++             G T  
Sbjct: 109 TRMYIEQRDRL--YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV 166

Query: 150 --------------EDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVME 195
                         +   F +++      E  +  LQ+++  I    PN+  S       
Sbjct: 167 ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID---PNW-TSRSDHSSN 222

Query: 196 IRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDE---DAF----KVI---RHMG 245
           I+  I   +   L  LL +  + N      L +  +  +    +AF    K++   R   
Sbjct: 223 IKLRIHSIQAE-LRRLLKSKPYENC-----LLVLLNVQNAKAWNAFNLSCKILLTTRFKQ 276

Query: 246 RGYPIIVSSVPRETKALYSLRD------PDEVMSFLRRLARWKKSLGIP 288
                +   +   T    SL        PDEV S    L ++   L   
Sbjct: 277 -----VTDFLSAATTTHISLDHHSMTLTPDEVKSL---LLKY---LDCR 314

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 1e-06
 Identities = 42/326 (12%), Positives = 92/326 (28%), Gaps = 76/326 (23%)

Query: 2   KHPSALDTFDRM--VAAAKGKKIV-VFL------DYDGTLSPIVEDPDKAFMSDTMRMAV 52
               A+    R+     +K +++V  F+      +Y   +SPI  +  +  M   M +  
Sbjct: 56  MSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQ 115

Query: 53  HEVAH-----FFPTAIVSGRCLDKVSRFV-QLKNVVYAGSHGMDISTPAGSLKQ------ 100
            +  +     F    +   +   K+ + + +L+        G+      GS K       
Sbjct: 116 RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGV-----LGSGKTWVALDV 170

Query: 101 -NNPKHETR--------TVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVED 151
             + K + +         +    +     +  Q+ L QI        +    IK   +  
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK-LRIHS 229

Query: 152 NKFCISVHFRRVDE-------DDINTLQEMVNSIVEAYPNFR-----ISGGKKVMEIRPC 199
            +  +    +            ++   +        A+ N        +  K+V +    
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAK-----AWNAF-NLSCKILLTTRFKQVTDFLS- 282

Query: 200 IDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTD--EDAFKVIRHMGRGYPIIVSSVPR 257
                  +L++   T   +     L  Y+     D   +            P  +S +  
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN-------PRRLSIIAE 335

Query: 258 ETKALYSLRDPDEVMSFLRRLARWKK 283
                 S+RD       L     WK 
Sbjct: 336 ------SIRD------GLATWDNWKH 349

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* Length = 262

 Score = 48.8 bits (115), Expect = 6e-07
 Identities = 38/261 (14%), Positives = 84/261 (32%), Gaps = 31/261 (11%)

Query: 15  AAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSR 74
           AA + ++++   D DGTL+     P +  +   +   + ++       +V G    K++ 
Sbjct: 7   AARRKERVLCLFDVDGTLT-----PARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAE 61

Query: 75  FVQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMI 134
             QL +          +    G+++  + +  ++         +  +  Q+ +      +
Sbjct: 62  --QLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQT---IQNHLGEELLQDLINFCLSYM 116

Query: 135 QVLEEKIKTIKGATVEDNKFCISVHFRRVDEDD----------INTLQEMVNSIVEAYPN 184
            +L    K        +    IS   R    ++              ++ V ++   +  
Sbjct: 117 ALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAG 176

Query: 185 FRIS---GGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI 241
             +    GG    ++ P   WDK   L+ L           F          D + F   
Sbjct: 177 KGLRFSRGGMISFDVFPE-GWDKRYCLDSLDQDSFDTIH--FFGNETSPGGNDFEIFADP 233

Query: 242 RHMGRGYPIIVSSVPRETKAL 262
           R +G      V S P++T   
Sbjct: 234 RTVG----HSVVS-PQDTVQR 249

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 Length = 275

 Score = 46.6 bits (110), Expect = 3e-06
 Identities = 32/247 (12%), Positives = 72/247 (29%), Gaps = 15/247 (6%)

Query: 20  KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV-AHFFPTAIVSGRCLDKVSRFVQ- 77
           + ++VF D DGTL     D    +        +  +     P  + S +   ++    + 
Sbjct: 8   QPLLVFSDLDGTLL----DSHS-YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKT 62

Query: 78  --LKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQ 135
             L+ +     +G  I       + +        +      +V     ++   +      
Sbjct: 63  LGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDD 122

Query: 136 VLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVME 195
           V +  I    G +                    +  +    +        +   G +   
Sbjct: 123 VDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWH 182

Query: 196 IRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSV 255
           +       K +A  +++ T+   +      L +GD   D    +V+      Y +IV  +
Sbjct: 183 VLD-ASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVM-----DYAVIVKGL 236

Query: 256 PRETKAL 262
            RE   L
Sbjct: 237 NREGVHL 243

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} PDB: 2i54_A* 2i55_A* Length = 246

 Score = 42.6 bits (99), Expect = 5e-05
 Identities = 44/273 (16%), Positives = 95/273 (34%), Gaps = 47/273 (17%)

Query: 20  KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF-FPTAIVSGRCLDKVSRFVQL 78
           K++++  D DGTL+     P +   +D MR  +       F    V G    K     QL
Sbjct: 3   KRVLLLFDVDGTLT-----PPRLCQTDEMRALIKRARGAGFCVGTVGGSDFAKQVE--QL 55

Query: 79  KNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLE 138
              V      +       + +     H    ++  GN+ +      +F+ +   +I  L+
Sbjct: 56  GRDVLTQFDYVFAENGLLAYRNGLEIHRQSLLNALGNDRI-----VKFVKKTLRLIADLD 110

Query: 139 EKIKTIKGATVEDNKFCISVHFRRVDEDDI----------NTLQEMVNSIVEAYPNFRIS 188
             ++        +    +S   R   + +                ++  +  ++P+F + 
Sbjct: 111 IPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIAELENSFPDFGLK 170

Query: 189 ---GGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMG 245
              GG+   ++ P + WDK   L+++ D F          ++   DKT E         G
Sbjct: 171 YSIGGQISFDVFP-VGWDKTYCLQFVEDDFE--------EIHFFGDKTQEG--------G 213

Query: 246 RGYPIIVSSVPRETKALYSLRDPDEVMSFLRRL 278
             Y I   +  R     + +    + ++ + ++
Sbjct: 214 NDYEIY--TDKRTIG--HKVTSYKDTIAEVEKI 242

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 Length = 332

 Score = 42.8 bits (100), Expect = 6e-05
 Identities = 13/96 (13%), Positives = 32/96 (33%), Gaps = 11/96 (11%)

Query: 150 EDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALE 209
              +  +S+             +++           R    K V  ++     +K + + 
Sbjct: 160 GLREELLSIIDVIASLSGEELFRKLDELF------SRSEVRKIVESVKAVGAGEKAKIMR 213

Query: 210 YLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMG 245
              ++ G +      P+ +GD  +D   F+  R +G
Sbjct: 214 GYCESKGID-----FPVVVGDSISDYKMFEAARGLG 244

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	288
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	100.0
3dao_A	283	Putative phosphatse; structural genomics, joint ce	100.0
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	100.0
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	99.98
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	99.97
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	99.97
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	99.97
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	99.97
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	99.97
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	99.97
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	99.97
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	99.97
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	99.97
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	99.96
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	99.96
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	99.96
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	99.96
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.96
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	99.96
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	99.96
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	99.96
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	99.95
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.95
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	99.95
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	99.94
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.89
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	99.67
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.65
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.62
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.62
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.59
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.54
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.49
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.48
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.44
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.42
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.41
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.4
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.39
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.37
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.37
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.35
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.33
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.3
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.24
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.22
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.19
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.18
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.15
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.14
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.14
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.12
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.1
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.09
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.06
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.04
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.01
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	98.93
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	98.91
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	98.88
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.83
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	98.82
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	98.73
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	98.7
2o2x_A	218	Hypothetical protein; structural genomics, joint c	98.68
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	98.67
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	98.66
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	98.65
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.65
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	98.64
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	98.63
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	98.62
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	98.6
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	98.59
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	98.58
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	98.57
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	98.52
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	98.51
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	98.5
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	98.41
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	98.39
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	98.37
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	98.37
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	98.34
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	98.32
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	98.32
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	98.32
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	98.29
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	98.28
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	98.27
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	98.27
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	98.2
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	98.18
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	98.17
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	98.16
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.16
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	98.15
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	98.14
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	98.14
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	98.09
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	98.06
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	97.98
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	97.94
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	97.92
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	97.89
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	97.88
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	97.86
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	97.84
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	97.83
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	97.83
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	97.83
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	97.8
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	97.75
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	97.73
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	97.7
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	97.7
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	97.68
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	97.64
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	97.58
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	97.58
2hsz_A	243	Novel predicted phosphatase; structural genomics,	97.54
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	97.51
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	97.39
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	97.39
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	97.38
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	97.28
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	97.28
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	97.26
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	97.25
3fvv_A	232	Uncharacterized protein; unknown function, structu	97.24
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	97.24
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	97.21
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	97.2
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	96.23
3fvv_A	232	Uncharacterized protein; unknown function, structu	97.14
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	97.12
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	97.1
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	97.09
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	97.03
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	96.99
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	96.92
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	96.91
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	96.85
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	96.71
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	96.69
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	96.59
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	96.53
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	96.53
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	96.49
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	96.48
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	96.44
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	96.44
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	96.41
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	96.37
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	96.35
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	96.31
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	96.24
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	96.23
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	96.21
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	96.2
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	96.06
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	95.98
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	95.94
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	95.87
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	95.85
4gxt_A	385	A conserved functionally unknown protein; structur	95.83
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	95.75
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	95.56
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	95.55
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	95.51
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	95.51
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	95.43
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	95.42
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	95.41
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	95.39
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	95.33
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	95.32
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	95.24
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	95.23
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	95.22
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	95.11
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	95.06
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	95.04
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	95.04
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	94.92
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	94.9
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	94.85
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	94.84
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	94.81
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	94.78
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	94.76
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	94.68
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	94.68
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	94.56
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	94.5
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	94.47
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	94.33
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	94.14
2hsz_A	243	Novel predicted phosphatase; structural genomics,	94.05
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	93.64
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	93.63
2zg6_A	220	Putative uncharacterized protein ST2620, probable	93.41
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	93.3
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	93.29
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	93.21
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	93.14
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	93.09
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	93.03
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	92.75
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	92.55
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	92.37
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	92.14
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	91.91
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	91.84
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	91.79
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	91.57
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	91.54
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	91.37
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	91.01
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	89.33
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	87.72
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	87.31
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	87.23
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	87.13
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	86.73
2zg6_A	220	Putative uncharacterized protein ST2620, probable	86.08
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	85.53
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	84.77
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	84.72
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	81.54

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=100.00  E-value=6.8e-36  Score=256.69  Aligned_cols=229  Identities=23%  Similarity=0.334  Sum_probs=162.6

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhcCCCCeEEEccCceeEeCCCCCccc
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQ  100 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~~~~  100 (288)
                      .++||+||||||+++..++++..++++++++|++|++++.|+|||||++..+.+++... .++||+||++|+. ++... 
T Consensus         1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~g~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~-~~~~~-   77 (239)
T 1u02_A            1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEISRFLPLD-INMICYHGACSKI-NGQIV-   77 (239)
T ss_dssp             -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHHSEEEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEE-TTEEE-
T ss_pred             CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHhccc-hheEEECCEEEee-CCeee-
Confidence            37999999999998543334568999999999999987889999999999999988644 6899999999987 34321 


Q ss_pred             CCCCCcccccccCCCceeccCCCccc-hhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCCcccHHHHHHHHHHHH
Q 040896          101 NNPKHETRTVDEQGNEVVHFQPAQEF-LPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIV  179 (288)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  179 (288)
                       |...           .+ .  ...+ ......+.+.+    ...++..++.+...+.++++..+.. .....+.+.+.+
T Consensus        78 -~~~~-----------~~-~--~~~l~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l  137 (239)
T 1u02_A           78 -YNNG-----------SD-R--FLGVFDRIYEDTRSWV----SDFPGLRIYRKNLAVLYHLGLMGAD-MKPKLRSRIEEI  137 (239)
T ss_dssp             -ECTT-----------GG-G--GHHHHHHHHHHHTTHH----HHSTTCEEEEETTEEEEECTTSCST-THHHHHHHHHHH
T ss_pred             -eccc-----------cc-c--cchhhHHHHHHHHHHH----hhCCCcEEEecCCEEEEEcCCCChh-HHHHHHHHHHHH
Confidence             0000           00 0  0000 01223333333    2344566665565566666654321 122233333333


Q ss_pred             HhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCCc
Q 040896          180 EAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRET  259 (288)
Q Consensus       180 ~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~~  259 (288)
                      .+.+++.+.++..++||+|+ ++|||.||++|++++|        +++|||+.||++||+.+..   |+||+|+||  +.
T Consensus       138 ~~~~~~~~~~~~~~lei~~~-~~~Kg~al~~l~~~~g--------via~GD~~ND~~Ml~~a~~---g~~vam~Na--~~  203 (239)
T 1u02_A          138 ARIFGVETYYGKMIIELRVP-GVNKGSAIRSVRGERP--------AIIAGDDATDEAAFEANDD---ALTIKVGEG--ET  203 (239)
T ss_dssp             HHHHTCEEEECSSEEEEECT-TCCHHHHHHHHHTTSC--------EEEEESSHHHHHHHHTTTT---SEEEEESSS--CC
T ss_pred             hccCCcEEEeCCcEEEEEcC-CCCHHHHHHHHHhhCC--------eEEEeCCCccHHHHHHhhC---CcEEEECCC--CC
Confidence            32234666778899999999 9999999999999987        7999999999999999842   699999999  67


Q ss_pred             cceEEeCC---hhHHHHHHHHHHHHhhhCC
Q 040896          260 KALYSLRD---PDEVMSFLRRLARWKKSLG  286 (288)
Q Consensus       260 ~A~~~~~~---~~~v~~~l~~~~~~~~~~~  286 (288)
                      .|++++.+   .+||+++|++++..+++-|
T Consensus       204 ~A~~v~~~~~~~~gV~~~l~~~~~~~~~~~  233 (239)
T 1u02_A          204 HAKFHVADYIEMRKILKFIEMLGVQKKQEG  233 (239)
T ss_dssp             CCSEEESSHHHHHHHHHHHHHHHHHHC---
T ss_pred             cceEEeCCCCCHHHHHHHHHHHHHhccccc
Confidence            89999988   8899999999998877655

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=100.00  E-value=1.7e-32  Score=240.85  Aligned_cols=221  Identities=18%  Similarity=0.243  Sum_probs=150.5

Q ss_pred             cCCcEEEEEecCCccccCcCCCCCC-CCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcC-C-CCeEEEccCceeEeC
Q 040896           18 KGKKIVVFLDYDGTLSPIVEDPDKA-FMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ-L-KNVVYAGSHGMDIST   93 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~~~~~~~~~-~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~-~-~~~~~i~~nGa~i~~   93 (288)
                      ....|+|+|||||||++     ++. .+++.++++|++|++++ .|++||||+...+.+++. + ...++|++||+.++.
T Consensus        18 ~~~~kli~~DlDGTLl~-----~~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~   92 (283)
T 3dao_A           18 QGMIKLIATDIDGTLVK-----DGSLLIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRT   92 (283)
T ss_dssp             -CCCCEEEECCBTTTBS-----TTCSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEEC
T ss_pred             ccCceEEEEeCcCCCCC-----CCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEE
Confidence            35679999999999998     455 79999999999999985 899999999999998764 2 246899999999997


Q ss_pred             CCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHh-------hccCCeEE-----------------
Q 040896           94 PAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKI-------KTIKGATV-----------------  149 (288)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-----------------  149 (288)
                      .+.....                   .....   ....++.+.+....       ....+.+.                 
T Consensus        93 ~~~~i~~-------------------~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (283)
T 3dao_A           93 PKEILKT-------------------YPMDE---DIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGF  150 (283)
T ss_dssp             SSCEEEE-------------------CCCCH---HHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCC
T ss_pred             CCEEEEE-------------------ecCCH---HHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcC
Confidence            4322210                   00111   12222222222110       00000000                 


Q ss_pred             -----E-------ecCceEEEeccCCCcccHHHHHHHHHHHHHhCCCeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcC
Q 040896          150 -----E-------DNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFG  216 (288)
Q Consensus       150 -----e-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~  216 (288)
                           +       .....+.+..   +........+.+.+.+.  ..+.+ .++..++||+|+ ++|||.||+++++++|
T Consensus       151 ~~~~~~~l~~l~~~~~~ki~i~~---~~~~~~~~~~~l~~~~~--~~~~~~~s~~~~~ei~~~-~~~K~~~l~~l~~~lg  224 (283)
T 3dao_A          151 EMREVDDITRLDRNDIIKFTVFH---PDKCEELCTPVFIPAWN--KKAHLAAAGKEWVDCNAK-GVSKWTALSYLIDRFD  224 (283)
T ss_dssp             CEEECSCGGGCCCSCCCEEEEEC---SSCHHHHHTTTHHHHHT--TTEEEEEETTTEEEEEET-TCCHHHHHHHHHHHTT
T ss_pred             CceEcCCHHHcCccCceEEEEEc---ChHHHHHHHHHHHHHhc--CCEEEEEecCceEEEeeC-CCcHHHHHHHHHHHhC
Confidence                 0       0111122110   11111122222322222  13543 567889999999 9999999999999999


Q ss_pred             CCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHHH
Q 040896          217 FNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRLA  279 (288)
Q Consensus       217 ~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~~  279 (288)
                      ++.+   ++++|||+.||++||+.+     |++|+|+||.++  ..|+|++.+  .+||+++|++++
T Consensus       225 i~~~---e~ia~GD~~NDi~ml~~a-----g~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~l  283 (283)
T 3dao_A          225 LLPD---EVCCFGDNLNDIEMLQNA-----GISYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSFL  283 (283)
T ss_dssp             CCGG---GEEEEECSGGGHHHHHHS-----SEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHTC
T ss_pred             CCHH---HEEEECCCHHHHHHHHhC-----CCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHHHhC
Confidence            9987   999999999999999999     899999999874  689999975  668999998763

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=100.00  E-value=1.9e-32  Score=240.78  Aligned_cols=220  Identities=17%  Similarity=0.210  Sum_probs=146.5

Q ss_pred             CCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCC
Q 040896           19 GKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTP   94 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~   94 (288)
                      ...|+|+|||||||++     +...+++.++++|++|++++ .|++||||++..+.+++   +++ .++|++||+.++..
T Consensus        19 ~~~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~-~~~I~~nGa~i~~~   92 (285)
T 3pgv_A           19 GMYQVVASDLDGTLLS-----PDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIR-SYMITSNGARVHDS   92 (285)
T ss_dssp             --CCEEEEECCCCCSC-----TTSCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSC-CEEEEGGGTEEECT
T ss_pred             CcceEEEEeCcCCCCC-----CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCC-ccEEEcCCeEEECC
Confidence            4679999999999999     56789999999999999985 89999999999888765   454 67999999999965


Q ss_pred             CCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHH-------------------------HHHhhc--cCCe
Q 040896           95 AGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVL-------------------------EEKIKT--IKGA  147 (288)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~--~~~~  147 (288)
                      ++......                  ....   .....+.+.+                         ..+...  .+..
T Consensus        93 ~~~~l~~~------------------~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (285)
T 3pgv_A           93 DGQQIFAH------------------NLDR---DIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYK  151 (285)
T ss_dssp             TSCEEEEC------------------CCCH---HHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEE
T ss_pred             CCCEEEec------------------CCCH---HHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccE
Confidence            44422100                  0000   0111111100                         000000  0000


Q ss_pred             EEE-----ecC-ceEEEeccCCCcccHHHHHHHHHHHHHhCC-CeE-EeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCC
Q 040896          148 TVE-----DNK-FCISVHFRRVDEDDINTLQEMVNSIVEAYP-NFR-ISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNN  219 (288)
Q Consensus       148 ~~e-----~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~-~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~  219 (288)
                      ...     ... ..+.+.  ..++.....+.+.+.   +.++ .+. +.++..++||+|+ ++|||.||+++++++|++.
T Consensus       152 ~~~~~~~~~~~i~ki~~~--~~~~~~~~~~~~~l~---~~~~~~~~~~~s~~~~~ei~~~-~~~K~~al~~l~~~lgi~~  225 (285)
T 3pgv_A          152 LYEPGELDPQGISKVFFT--CEDHEHLLPLEQAMN---ARWGDRVNVSFSTLTCLEVMAG-GVSKGHALEAVAKMLGYTL  225 (285)
T ss_dssp             ECCTTCSCCSSEEEEEEE--CSCHHHHHHHHHHHH---HHHGGGEEEEESSTTEEEEEET-TCSHHHHHHHHHHHTTCCG
T ss_pred             EecHHHcCCCCceEEEEe--CCCHHHHHHHHHHHH---HHhcCCEEEEEeCCceEEEecC-CCChHHHHHHHHHHhCCCH
Confidence            000     000 011111  111111122222222   2232 244 4677899999999 9999999999999999998


Q ss_pred             CCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceE--EeC--ChhHHHHHHHHHH
Q 040896          220 ASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALY--SLR--DPDEVMSFLRRLA  279 (288)
Q Consensus       220 ~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~--~~~--~~~~v~~~l~~~~  279 (288)
                      +   ++++|||+.||++||+.+     |+||+|+||.++  .+|++  ++.  +.+||+++|++++
T Consensus       226 ~---~~ia~GD~~NDi~ml~~a-----g~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~  283 (285)
T 3pgv_A          226 S---DCIAFGDGMNDAEMLSMA-----GKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY  283 (285)
T ss_dssp             G---GEEEEECSGGGHHHHHHS-----SEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred             H---HEEEECCcHhhHHHHHhc-----CCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence            7   999999999999999999     899999999874  56774  665  4789999999986

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.98  E-value=4.1e-31  Score=232.22  Aligned_cols=222  Identities=17%  Similarity=0.218  Sum_probs=154.1

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAG   96 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~   96 (288)
                      .|+|+|||||||++     +...+++.+.++|+++++++ .|++||||+...+..++   +++ .++|++||+.++...+
T Consensus         6 ~kli~fDlDGTLl~-----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~-~~~i~~nGa~i~~~~~   79 (290)
T 3dnp_A            6 KQLLALNIDGALLR-----SNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLD-AKLITHSGAYIAEKID   79 (290)
T ss_dssp             CCEEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCC-SCEEEGGGTEEESSTT
T ss_pred             ceEEEEcCCCCCCC-----CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC-CeEEEcCCeEEEcCCC
Confidence            68999999999999     56789999999999999985 89999999999887765   443 3799999999987444


Q ss_pred             CcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHh-----hccCCeEEEec-------------------
Q 040896           97 SLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKI-----KTIKGATVEDN-------------------  152 (288)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~e~~-------------------  152 (288)
                      .....                  .....   ....++.+.+....     ....+.+....                   
T Consensus        80 ~~~~~------------------~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (290)
T 3dnp_A           80 APFFE------------------KRISD---DHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIF  138 (290)
T ss_dssp             SCSEE------------------CCCCH---HHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTT
T ss_pred             CEEEe------------------cCCCH---HHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhcccccccc
Confidence            32210                  00111   22333444333210     00000000000                   


Q ss_pred             -------------------CceEEEeccCCCcccHHHHHHHHHHHHHhCCCeEE-eCCceEEEEeCCCCCCHHHHHHHHH
Q 040896          153 -------------------KFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRI-SGGKKVMEIRPCIDWDKGRALEYLL  212 (288)
Q Consensus       153 -------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ieI~~~~~~sKg~al~~l~  212 (288)
                                         ...+.+ +  .+.......   ++.+....+++.+ .++..++||.|+ ++|||.||++++
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~ki~~-~--~~~~~~~~~---~~~l~~~~~~~~~~~s~~~~~ei~~~-~~~K~~~l~~l~  211 (290)
T 3dnp_A          139 YPVQFVESLSDLLMDEPVSAPVIEV-Y--TEHDIQHDI---TETITKAFPAVDVIRVNDEKLNIVPK-GVSKEAGLALVA  211 (290)
T ss_dssp             BCEEECSCHHHHHHHSCCCCSEEEE-E--CCGGGHHHH---HHHHHHHCTTEEEEEEETTEEEEEET-TCCHHHHHHHHH
T ss_pred             ccccccCCHHHHHhcCCCCceEEEE-e--CCHHHHHHH---HHHHHhhCCcEEEEEeCCCeEEEEEC-CCCHHHHHHHHH
Confidence                               000000 0  011111112   2222233455664 456899999999 999999999999


Q ss_pred             HhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHHHHHhhh
Q 040896          213 DTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRLARWKKS  284 (288)
Q Consensus       213 ~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~~~~~~~  284 (288)
                      +++|++++   ++++||||.||++||+.+     |++|+|+||.+.  .+|++++.+  .+||+++|++++..+..
T Consensus       212 ~~lgi~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~  279 (290)
T 3dnp_A          212 SELGLSMD---DVVAIGHQYDDLPMIELA-----GLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQQR  279 (290)
T ss_dssp             HHTTCCGG---GEEEEECSGGGHHHHHHS-----SEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHHHHH
T ss_pred             HHcCCCHH---HEEEECCchhhHHHHHhc-----CCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHHhcCc
Confidence            99999987   999999999999999999     999999999874  689999874  67899999999876543

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.97  E-value=7.7e-31  Score=227.94  Aligned_cols=219  Identities=14%  Similarity=0.164  Sum_probs=147.2

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcCCCCeEEEccCceeE-eCCCCC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDI-STPAGS   97 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~~~~~~~i~~nGa~i-~~~~~~   97 (288)
                      ..|+|+|||||||+++    +...+++.++++|+++++++ .|++||||+...+..+..++..++|++||+.+ +..+..
T Consensus        11 miKli~~DlDGTLl~~----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~~   86 (268)
T 3r4c_A           11 MIKVLLLDVDGTLLSF----ETHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEIDAVPYDGVIALNGAECVLRDGSV   86 (268)
T ss_dssp             CCCEEEECSBTTTBCT----TTCSCCHHHHHHHHHHHHTTCEEEEECSSCTTCCGGGTTSCCCEEEEGGGTEEEETTSCE
T ss_pred             ceEEEEEeCCCCCcCC----CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHhHHHHhcCCCcEEEeCCcEEEEcCCeE
Confidence            4699999999999983    25679999999999999995 89999999998875443343356899999999 876432


Q ss_pred             cccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEE---------------eccC
Q 040896           98 LKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISV---------------HFRR  162 (288)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~---------------~~~~  162 (288)
                      ...                   .....   ....++.+.+...  .. ...+.........               .+..
T Consensus        87 ~~~-------------------~~l~~---~~~~~i~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (268)
T 3r4c_A           87 IRK-------------------VAIPA---QDFRKSMELAREF--DF-AVALELNEGVFVNRLTPTVEQIAGIVEHPVPP  141 (268)
T ss_dssp             EEE-------------------CCCCH---HHHHHHHHHHHHT--TC-EEEEEETTEEEESCCCHHHHHHHHHHTCCCCC
T ss_pred             EEE-------------------ecCCH---HHHHHHHHHHHHc--Cc-EEEEEECCEEEEeCCcHHHHHHHHHcCCCCCc
Confidence            111                   00111   1222233332221  00 0000000000000               0000


Q ss_pred             CCcccHH-HH-------------HHHHHHHHHhCCCeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEE
Q 040896          163 VDEDDIN-TL-------------QEMVNSIVEAYPNFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLY  227 (288)
Q Consensus       163 ~~~~~~~-~~-------------~~~l~~~~~~~~~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~  227 (288)
                      ..  ... ..             .+...++.+.++++.+ .++..++||.|+ ++|||.||+++++++|++.+   ++++
T Consensus       142 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~-~~~K~~~l~~l~~~lgi~~~---~~ia  215 (268)
T 3r4c_A          142 VV--DIEEMFERKECCQLCFYFDEEAEQKVMPLLSGLSATRWHPLFADVNVA-GTSKATGLSLFADYYRVKVS---EIMA  215 (268)
T ss_dssp             BC--CHHHHHHHSCCCCEEEECCHHHHHHHGGGCTTEEEEEEETTEEEEEET-TCCHHHHHHHHHHHTTCCGG---GEEE
T ss_pred             cc--chHHHhccCceEEEEEecChHHHHHHHHhCCCcEEEEecCCeEEEeeC-CCCHHHHHHHHHHHcCCCHH---HEEE
Confidence            00  000 00             0112233344555554 456789999999 99999999999999999987   9999


Q ss_pred             EcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHH
Q 040896          228 IGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRL  278 (288)
Q Consensus       228 ~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~  278 (288)
                      |||+.||++||+.+     |++|+|+||.++  .+|++++.+  .+||+++|+++
T Consensus       216 ~GD~~NDi~m~~~a-----g~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~  265 (268)
T 3r4c_A          216 CGDGGNDIPMLKAA-----GIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKHF  265 (268)
T ss_dssp             EECSGGGHHHHHHS-----SEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHHT
T ss_pred             ECCcHHhHHHHHhC-----CCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHHh
Confidence            99999999999999     899999999874  689999874  77999999875

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=99.97  E-value=8e-31  Score=229.12  Aligned_cols=219  Identities=17%  Similarity=0.152  Sum_probs=150.7

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCC--CeEEEccCceeEeC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLK--NVVYAGSHGMDIST   93 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~--~~~~i~~nGa~i~~   93 (288)
                      +.|+|+|||||||++     +...+++.++++|+++++++ .|+++|||++..+.+++   +++  ..++|++||+.++.
T Consensus         4 ~~kli~fDlDGTLl~-----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~   78 (279)
T 4dw8_A            4 KYKLIVLDLDGTLTN-----SKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIIN   78 (279)
T ss_dssp             CCCEEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEE
T ss_pred             cceEEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEE
Confidence            368999999999999     56789999999999999985 89999999999988875   442  46899999999985


Q ss_pred             C-CCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhc-----cCCeEEE-----------------
Q 040896           94 P-AGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKT-----IKGATVE-----------------  150 (288)
Q Consensus        94 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~e-----------------  150 (288)
                      . .+.....                  .....   ....++.+.+....-.     ..+.+..                 
T Consensus        79 ~~~~~~~~~------------------~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (279)
T 4dw8_A           79 WESKEMMYE------------------NVLPN---EVVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMA  137 (279)
T ss_dssp             TTTCCEEEE------------------CCCCG---GGHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCE
T ss_pred             CCCCeEEEE------------------ecCCH---HHHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCC
Confidence            4 3332210                  00111   1223333333221000     0000000                 


Q ss_pred             ------------ecCceEEEeccCCCcccHHHHHHHHHHHH-HhCC-CeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhc
Q 040896          151 ------------DNKFCISVHFRRVDEDDINTLQEMVNSIV-EAYP-NFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTF  215 (288)
Q Consensus       151 ------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~-~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~  215 (288)
                                  .....+.+.   .+    ....+.+.+.+ +.+. .+.+ .++..++||.|+ ++||+.|++++++++
T Consensus       138 ~~~~~~~~~~~~~~~~ki~~~---~~----~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~-~~~K~~~l~~l~~~l  209 (279)
T 4dw8_A          138 IRETNDFLTDITLPVAKCLIV---GD----AGKLIPVESELCIRLQGKINVFRSEPYFLELVPQ-GIDKALSLSVLLENI  209 (279)
T ss_dssp             EEECSCHHHHSCSCCSCEEEE---SC----HHHHHHHHHHHHHHTTTTCEEEEEETTEEEEECT-TCCHHHHHHHHHHHH
T ss_pred             cccHHHHHHhhcCCceEEEEe---CC----HHHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecC-CCChHHHHHHHHHHc
Confidence                        000011110   01    11222333323 3342 3554 466789999999 999999999999999


Q ss_pred             CCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHHHH
Q 040896          216 GFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRLAR  280 (288)
Q Consensus       216 ~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~~~  280 (288)
                      |++++   ++++|||+.||++||+.+     |+||+|+||.+.  ..|++++.+  .+||+++|++++.
T Consensus       210 gi~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~  270 (279)
T 4dw8_A          210 GMTRE---EVIAIGDGYNDLSMIKFA-----GMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFN  270 (279)
T ss_dssp             TCCGG---GEEEEECSGGGHHHHHHS-----SEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC-
T ss_pred             CCCHH---HEEEECCChhhHHHHHHc-----CcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHh
Confidence            99987   999999999999999999     899999999764  689999875  6799999999864

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=99.97  E-value=6.8e-31  Score=232.99  Aligned_cols=218  Identities=17%  Similarity=0.284  Sum_probs=151.7

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHH-HHHHHHHHhhcC-CEEEEcCCChhhHhhhcC-CC-CeEEEccCceeEeCCC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDT-MRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ-LK-NVVYAGSHGMDISTPA   95 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~-~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~-~~-~~~~i~~nGa~i~~~~   95 (288)
                      ..|+|+|||||||++     +...+++. +.++|+++++++ .|++||||+...+.+++. +. ..++|++||+.++..+
T Consensus        36 ~iKli~fDlDGTLld-----~~~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~  110 (304)
T 3l7y_A           36 SVKVIATDMDGTFLN-----SKGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKN  110 (304)
T ss_dssp             CCSEEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETT
T ss_pred             eeEEEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECC
Confidence            368999999999999     56789998 899999999985 899999999999998875 32 3689999999997543


Q ss_pred             CCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHh---------------------------hcc-CCe
Q 040896           96 GSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKI---------------------------KTI-KGA  147 (288)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~-~~~  147 (288)
                      .....                   .....   ..+.++.+.+....                           ... +..
T Consensus       111 ~~i~~-------------------~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (304)
T 3l7y_A          111 QSLIE-------------------VFQQR---EDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVL  168 (304)
T ss_dssp             EEEEE-------------------CCCCH---HHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSE
T ss_pred             EEEEE-------------------ecCCH---HHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccc
Confidence            22110                   00111   12233333332210                           000 000


Q ss_pred             E-E-------EecCceEEEeccCCCcccHHHHHHHHHHHHH-hCCC--eEE-eCCceEEEEeCCCCCCHHHHHHHHHHhc
Q 040896          148 T-V-------EDNKFCISVHFRRVDEDDINTLQEMVNSIVE-AYPN--FRI-SGGKKVMEIRPCIDWDKGRALEYLLDTF  215 (288)
Q Consensus       148 ~-~-------e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~--~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~  215 (288)
                      . +       ......+.+..   +....    +.+.+.+. .+++  +.+ .++..++||.|+ ++|||.||+++++++
T Consensus       169 ~~~~~l~~~~~~~~~ki~~~~---~~~~~----~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~-~~~K~~al~~l~~~l  240 (304)
T 3l7y_A          169 ELVNSFSPLPDERFFKLTLQV---KEEES----AQIMKAIADYKTSQRLVGTASGFGYIDIITK-GLHKGWALQQLLKRW  240 (304)
T ss_dssp             EEESCCSSCC-CCEEEEEEEC---CGGGH----HHHHHHHHTSTTTTTEEEEECSTTEEEEEET-TCSHHHHHHHHHHHT
T ss_pred             eecCCHHHcCcCCeEEEEEEc---CHHHH----HHHHHHHHHhcCCCeEEEEEcCCceEEEEcC-CCCHHHHHHHHHHHh
Confidence            0 0       00001111111   11111    22333333 3444  554 567889999999 999999999999999


Q ss_pred             CCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHHHH
Q 040896          216 GFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRLAR  280 (288)
Q Consensus       216 ~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~~~  280 (288)
                      |++++   ++++|||+.||++|++.+     |++|+|+||.++  .+|++++.+  .+||+++|++++.
T Consensus       241 gi~~~---e~i~~GDs~NDi~m~~~a-----g~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~  301 (304)
T 3l7y_A          241 NFTSD---HLMAFGDGGNDIEMLKLA-----KYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLA  301 (304)
T ss_dssp             TCCGG---GEEEEECSGGGHHHHHHC-----TEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred             CcCHH---HEEEECCCHHHHHHHHhc-----CCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHH
Confidence            99987   999999999999999999     899999999874  689999875  6689999999875

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=99.97  E-value=1.3e-30  Score=225.51  Aligned_cols=209  Identities=15%  Similarity=0.231  Sum_probs=143.8

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAG   96 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~   96 (288)
                      .|+|+|||||||++     ++..+++.++++|+++++++ .|+++|||+...+.+++   ++..  +|++||+.++..+.
T Consensus         3 ~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~--~i~~nGa~i~~~~~   75 (258)
T 2pq0_A            3 RKIVFFDIDGTLLD-----EQKQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDS--FVSFNGQYVVFEGN   75 (258)
T ss_dssp             CCEEEECTBTTTBC-----TTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCC--EEEGGGTEEEETTE
T ss_pred             ceEEEEeCCCCCcC-----CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCE--EEECCCCEEEECCE
Confidence            58999999999999     45679999999999999985 89999999998877764   4433  78999999986432


Q ss_pred             CcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccC-------CeEEE-------------------
Q 040896           97 SLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIK-------GATVE-------------------  150 (288)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~e-------------------  150 (288)
                      ....                   .....   +.+.++.+.+...  ..+       +.+..                   
T Consensus        76 ~i~~-------------------~~~~~---~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (258)
T 2pq0_A           76 VLYK-------------------QPLRR---EKVRALTEEAHKN--GHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHP  131 (258)
T ss_dssp             EEEE-------------------CCCCH---HHHHHHHHHHHHT--TCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCC
T ss_pred             EEEE-------------------ecCCH---HHHHHHHHHHHhC--CCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCcc
Confidence            2110                   00000   1122222222211  000       00000                   


Q ss_pred             ---------ecCceEEEeccCCCcccHHHHHHHHHHHHHhCCCeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCC
Q 040896          151 ---------DNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNA  220 (288)
Q Consensus       151 ---------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~  220 (288)
                               ...+.+.+.   .+    ...   .....+.++.+.+ .+++.++||+|+ ++|||.|++++++++|++.+
T Consensus       132 ~~~~~~~~~~~~~k~~~~---~~----~~~---~~~~~~~~~~~~~~~~~~~~~ei~~~-~~~K~~~l~~l~~~lgi~~~  200 (258)
T 2pq0_A          132 PVDPLYYENKDIYQALLF---CR----AEE---EEPYVRNYPEFRFVRWHDVSTDVLPA-GGSKAEGIRMMIEKLGIDKK  200 (258)
T ss_dssp             CBCTTGGGGSCCCEEEEC---SC----HHH---HHHHHHHCTTEEEEEEETTEEEEEES-SCCHHHHHHHHHHHHTCCGG
T ss_pred             ccccchhhccCceEEEEE---CC----HHH---HHHHHHhCCCeEEEEeCCceEEEEEC-CCChHHHHHHHHHHhCCCHH
Confidence                     000001000   00    011   1122223455654 446789999999 99999999999999999987


Q ss_pred             CCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHHH
Q 040896          221 SDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRLA  279 (288)
Q Consensus       221 ~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~~  279 (288)
                         ++++||||.||++||+.+     |++|+|+||.+.  ..|++++.+  .+||+++|+++.
T Consensus       201 ---~~ia~GDs~NDi~ml~~a-----g~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~~~  255 (258)
T 2pq0_A          201 ---DVYAFGDGLNDIEMLSFV-----GTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQLQ  255 (258)
T ss_dssp             ---GEEEECCSGGGHHHHHHS-----SEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHHHTT
T ss_pred             ---HEEEECCcHHhHHHHHhC-----CcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHHhC
Confidence               999999999999999999     899999999764  689999875  679999998864

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=99.97  E-value=1.7e-30  Score=227.40  Aligned_cols=225  Identities=15%  Similarity=0.213  Sum_probs=128.3

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEe-CC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDIS-TP   94 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~-~~   94 (288)
                      +.++|||||||||++.     +..++++++++|++|++++ .|+|||||++..+.+++   ++...++||+||+.|+ ..
T Consensus         8 ~~~li~~DlDGTLl~~-----~~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~   82 (275)
T 1xvi_A            8 QPLLVFSDLDGTLLDS-----HSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAE   82 (275)
T ss_dssp             CCEEEEEECTTTTSCS-----SCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCT
T ss_pred             CceEEEEeCCCCCCCC-----CCcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecC
Confidence            5799999999999983     4567788999999999885 99999999999988875   4433369999999998 33


Q ss_pred             CCCc---ccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhh----ccCCeE----------------E-E
Q 040896           95 AGSL---KQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIK----TIKGAT----------------V-E  150 (288)
Q Consensus        95 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----------------~-e  150 (288)
                      ++..   ...|.                .....   ..+..+.+.+.....    ...+..                . .
T Consensus        83 ~~~~~~~~~~~~----------------~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (275)
T 1xvi_A           83 QWQEIDGFPRII----------------SGISH---GEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQ  143 (275)
T ss_dssp             TCTTSTTTTEEE----------------CSSCH---HHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHH
T ss_pred             cccccCceEEEe----------------cCCCH---HHHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHH
Confidence            2220   00000                00100   111222222111000    000000                0 0


Q ss_pred             ecCceEEEeccCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcC-CCCCCCce--eEE
Q 040896          151 DNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFG-FNNASDFL--PLY  227 (288)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~-~~~~~~~~--vv~  227 (288)
                      .+.+...+.+.. +    .+..+.+.+.+... ++.+.+++.++||+|+ +++||.|+++++++++ ++.+   +  +++
T Consensus       144 ~~~~~~~~~~~~-~----~~~~~~~~~~l~~~-~~~~~~~~~~leI~~~-~~~K~~~l~~l~~~~~~~~~~---~~~~~~  213 (275)
T 1xvi_A          144 LHEASVTLIWRD-S----DERMAQFTARLNEL-GLQFMQGARFWHVLDA-SAGKDQAANWIIATYQQLSGK---RPTTLG  213 (275)
T ss_dssp             CCSSCEEEEECS-C----HHHHHHHHHHHHHT-TEEEEECSSCEEEEET-TCCHHHHHHHHHHHHHHHHSS---CCEEEE
T ss_pred             hhccCceeEecC-C----HHHHHHHHHHHHhh-CeEEEECCceEEEecC-CCCHHHHHHHHHHHhhhcccc---cCcEEE
Confidence            001111111211 1    12233444444443 4666556679999999 9999999999999999 8877   7  999


Q ss_pred             EcCCcccHHHHHHHHhcCCceEEEEecCC---CCc----cce-EEeC--ChhHHHHHHHHHHHHhh
Q 040896          228 IGDDKTDEDAFKVIRHMGRGYPIIVSSVP---RET----KAL-YSLR--DPDEVMSFLRRLARWKK  283 (288)
Q Consensus       228 ~GDs~ND~~Ml~~~~~~~~g~~v~v~na~---~~~----~A~-~~~~--~~~~v~~~l~~~~~~~~  283 (288)
                      |||+.||++||+.+     |++|+|+|+.   ++.    .|+ +++.  +.+||+++|++++..|.
T Consensus       214 ~GD~~nD~~m~~~a-----g~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~~~l~~~~  274 (275)
T 1xvi_A          214 LGDGPNDAPLLEVM-----DYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFSARG  274 (275)
T ss_dssp             EESSGGGHHHHHTS-----SEEEECCCCC-------------------------------------
T ss_pred             ECCChhhHHHHHhC-----CceEEecCCCccchhhccccCCceeEccCCCchHHHHHHHHHHHhcC
Confidence            99999999999999     8999999996   332    268 8875  47799999999987664

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=99.97  E-value=3.3e-31  Score=231.61  Aligned_cols=219  Identities=16%  Similarity=0.157  Sum_probs=127.1

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCC--CeEEEccCceeEeC-
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLK--NVVYAGSHGMDIST-   93 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~--~~~~i~~nGa~i~~-   93 (288)
                      .|+|+|||||||++     +...+++.++++|+++++.+ .|+++|||++..+.+++   +++  ..++|++||+ ++. 
T Consensus         5 ~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa-i~~~   78 (279)
T 3mpo_A            5 IKLIAIDIDGTLLN-----EKNELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGS-VAQT   78 (279)
T ss_dssp             CCEEEECC----------------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGT-EEEE
T ss_pred             eEEEEEcCcCCCCC-----CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcE-EEEC
Confidence            68999999999999     56789999999999999985 89999999999988865   432  3579999999 553 


Q ss_pred             CCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHH----------------------------hhccC
Q 040896           94 PAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEK----------------------------IKTIK  145 (288)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  145 (288)
                      ..+.....                  .....   ..+.++.+.+...                            ....+
T Consensus        79 ~~~~~~~~------------------~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (279)
T 3mpo_A           79 ISGKVLTN------------------HSLTY---EDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRML  137 (279)
T ss_dssp             TTSCEEEE------------------CCCCH---HHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCC
T ss_pred             CCCCEEEe------------------cCCCH---HHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCc
Confidence            33332210                  00110   1222233322221                            00011


Q ss_pred             CeEEE-------ecCceEEEeccCCCcccHHHHHHHHHHHHHhCCCeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCC
Q 040896          146 GATVE-------DNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGF  217 (288)
Q Consensus       146 ~~~~e-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~  217 (288)
                      .....       .....+.+.   .+........+.+.+.+..  .+.+ .++..++||.|+ ++|||.|++++++++|+
T Consensus       138 ~~~~~~~~~~~~~~~~ki~~~---~~~~~~~~~~~~l~~~~~~--~~~~~~s~~~~~ei~~~-~~~K~~~l~~l~~~lgi  211 (279)
T 3mpo_A          138 IQYREVSETPRDLTISKAMFV---DYPQVIEQVKANMPQDFKD--RFSVVQSAPYFIEVMNR-RASKGGTLSELVDQLGL  211 (279)
T ss_dssp             EEECCGGGSCTTCCCCEEEEE---CCHHHHHHHHHHCCHHHHH--HEEEECCSSSEEEEEES-SCCHHHHHHHHHHHTTC
T ss_pred             ceecCHHHhhccCCcEEEEEc---CCHHHHHHHHHHHHHHhCC--CEEEEEecCceEEEecC-CCChHHHHHHHHHHcCC
Confidence            10000       000011110   0111111122222221211  1443 567899999999 99999999999999999


Q ss_pred             CCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHHHH
Q 040896          218 NNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRLAR  280 (288)
Q Consensus       218 ~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~~~  280 (288)
                      +++   ++++|||+.||++|++.+     |++|+|+||.+.  .+|++++.+  .+||+++|++++.
T Consensus       212 ~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~  270 (279)
T 3mpo_A          212 TAD---DVMTLGDQGNDLTMIKYA-----GLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRKYAL  270 (279)
T ss_dssp             CGG---GEEEC--CCTTHHHHHHS-----TEECBC---CCHHHHHCSCBC------CHHHHHC----
T ss_pred             CHH---HEEEECCchhhHHHHHhc-----CceeeccCCCHHHHHhcceeccCCCccHHHHHHHHHhc
Confidence            987   999999999999999999     899999999874  689999864  6789999998764

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=99.97  E-value=4.1e-30  Score=227.97  Aligned_cols=220  Identities=18%  Similarity=0.212  Sum_probs=150.4

Q ss_pred             cEEEEEecCCccccCcCCCC-CCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc--C----CC--CeEEEccCcee
Q 040896           21 KIVVFLDYDGTLSPIVEDPD-KAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV--Q----LK--NVVYAGSHGMD   90 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~-~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~--~----~~--~~~~i~~nGa~   90 (288)
                      .|+|||||||||++     + +..++++++++|++|++++ .|++||||++..+.+++  .    +.  +.++||+||+.
T Consensus        27 ikli~~DlDGTLl~-----~~~~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~  101 (301)
T 2b30_A           27 IKLLLIDFDGTLFV-----DKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTI  101 (301)
T ss_dssp             CCEEEEETBTTTBC-----CTTTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTE
T ss_pred             ccEEEEECCCCCcC-----CCCCccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeE
Confidence            58999999999999     5 6789999999999999985 89999999999888776  3    22  14699999999


Q ss_pred             EeCCCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhh----cc---CCeEEEe------------
Q 040896           91 ISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIK----TI---KGATVED------------  151 (288)
Q Consensus        91 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~e~------------  151 (288)
                      |+.+++.....                  .....   ..+..+.+.+....-    ..   .+.+...            
T Consensus       102 i~~~~~~~i~~------------------~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~  160 (301)
T 2b30_A          102 VYDQIGYTLLD------------------ETIET---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMY  160 (301)
T ss_dssp             EECTTCCEEEE------------------CCCCH---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHH
T ss_pred             EEeCCCCEEEE------------------ccCCH---HHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhh
Confidence            99743332210                  00111   122223322221100    00   0011100            


Q ss_pred             -----------------cCceEEEeccCCCcccHHHHHHHHHHHH-HhC-CCeEE-eCCceEEEEeCCCCCCHHHHHHHH
Q 040896          152 -----------------NKFCISVHFRRVDEDDINTLQEMVNSIV-EAY-PNFRI-SGGKKVMEIRPCIDWDKGRALEYL  211 (288)
Q Consensus       152 -----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~-~~~~~-~~~~~~ieI~~~~~~sKg~al~~l  211 (288)
                                       ....+.+..   ++...    +.+.+.+ +.+ .++.+ .++..++||+|+ +++||.|++++
T Consensus       161 ~~~~~~~~~~~~~~~~~~i~ki~~~~---~~~~~----~~~~~~l~~~~~~~~~~~~s~~~~lei~~~-~~~K~~~l~~l  232 (301)
T 2b30_A          161 SENRSIIIRHNEMLKYRTMNKLMIVL---DPSES----KTVIGNLKQKFKNKLTIFTTYNGHAEVTKL-GHDKYTGINYL  232 (301)
T ss_dssp             SCCCCEEECHHHHTTCCCCSEEEECC---CTTTH----HHHHHHHHHHSTTTEEEEECTTSCEEEEET-TCCHHHHHHHH
T ss_pred             ccCCceeecchhhhccCCceEEEEEC---CHHHH----HHHHHHHHHHhcCCEEEEEeCCcceEecCC-CCCcHHHHHHH
Confidence                             000111100   11111    2222222 233 24665 466789999999 99999999999


Q ss_pred             HHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeC-C--hhHHHHHHHHHHHHh
Q 040896          212 LDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLR-D--PDEVMSFLRRLARWK  282 (288)
Q Consensus       212 ~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~-~--~~~v~~~l~~~~~~~  282 (288)
                      ++++|++.+   ++++|||+.||++||+.+     |++|+|+|+.+.  ..|++++. +  .+||+++|++++..+
T Consensus       233 ~~~~~~~~~---~~~~~GD~~nD~~m~~~a-----g~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~~~  300 (301)
T 2b30_A          233 LKHYNISND---QVLVVGDAENDIAMLSNF-----KYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDLK  300 (301)
T ss_dssp             HHHTTCCGG---GEEEEECSGGGHHHHHSC-----SEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTTC
T ss_pred             HHHcCCCHH---HEEEECCCHHHHHHHHHc-----CCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHhcC
Confidence            999999877   999999999999999999     899999999763  57999987 5  678999999998664

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=99.97  E-value=5.9e-30  Score=222.59  Aligned_cols=213  Identities=19%  Similarity=0.244  Sum_probs=145.0

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcC-CCCeEEEccCceeEeCCCCCc
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ-LKNVVYAGSHGMDISTPAGSL   98 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~-~~~~~~i~~nGa~i~~~~~~~   98 (288)
                      .|+|+|||||||++     +...+++.++++|+++++.+ .|+++|||+...+.+++. +....+|++||+.++..+...
T Consensus         5 ~kli~fDlDGTLl~-----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~   79 (274)
T 3fzq_A            5 YKLLILDIDGTLRD-----EVYGIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELL   79 (274)
T ss_dssp             CCEEEECSBTTTBB-----TTTBCCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEE
T ss_pred             ceEEEEECCCCCCC-----CCCcCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEE
Confidence            58999999999999     56789999999999999885 899999999998887652 322348999999998543221


Q ss_pred             ccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhc-----cCCeEE------------------------
Q 040896           99 KQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKT-----IKGATV------------------------  149 (288)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~------------------------  149 (288)
                      ..                   .....   ....++.+.+......     ..+.+.                        
T Consensus        80 ~~-------------------~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (274)
T 3fzq_A           80 YN-------------------QSFNQ---RLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQ  137 (274)
T ss_dssp             EE-------------------CCCCH---HHHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHH
T ss_pred             EE-------------------cCCCH---HHHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhh
Confidence            11                   00000   1122222222211000     000000                        


Q ss_pred             ----------------EecCceEEEeccCCCcccHHHHHHHHHHHHHhCCCeEE-eCCc--eEEEEeCCCCCCHHHHHHH
Q 040896          150 ----------------EDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRI-SGGK--KVMEIRPCIDWDKGRALEY  210 (288)
Q Consensus       150 ----------------e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~--~~ieI~~~~~~sKg~al~~  210 (288)
                                      ......+.+.   .+    ....+.+.+.+...  +.+ .++.  .++||.|+ +++||.|+++
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~ki~~~---~~----~~~~~~~~~~l~~~--~~~~~~~~~~~~~ei~~~-~~~K~~~l~~  207 (274)
T 3fzq_A          138 HIQEKITYENNIEEYKSQDIHKICLW---SN----EKVFDEVKDILQDK--MELAQRDISSQYYEIIQK-DFHKGKAIKR  207 (274)
T ss_dssp             HCCSSSCCCCCGGGCSSCCCCEEEEE---CC----HHHHHHHHHHHGGG--EEEEEEEGGGTEEEEEET-TCSHHHHHHH
T ss_pred             hhhhhcccccchhhhcccCeEEEEEE---cC----HHHHHHHHHHhhcc--eEEEeccCCCceEEEeeC-CCCHHHHHHH
Confidence                            0000111111   01    12223333333321  333 3444  89999999 9999999999


Q ss_pred             HHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHH
Q 040896          211 LLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRL  278 (288)
Q Consensus       211 l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~  278 (288)
                      +++++|++++   ++++||||.||++|++.+     |++|+|+|+.++  ..|++++.+  .+||+++|+++
T Consensus       208 l~~~lgi~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~~  271 (274)
T 3fzq_A          208 LQERLGVTQK---ETICFGDGQNDIVMFQAS-----DVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKRR  271 (274)
T ss_dssp             HHHHHTCCST---TEEEECCSGGGHHHHHTC-----SEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHHT
T ss_pred             HHHHcCCCHH---HEEEECCChhHHHHHHhc-----CceEEecCccHHHHHhhhheeCCCchhHHHHHHHHh
Confidence            9999999988   999999999999999999     899999999874  689999975  67999999876

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=99.97  E-value=1.5e-29  Score=220.79  Aligned_cols=220  Identities=16%  Similarity=0.228  Sum_probs=148.9

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHH-HHHHHHHhhcC-CEEEEcCCChhhHhhhcC-CC-CeEEEccCceeEeCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTM-RMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ-LK-NVVYAGSHGMDISTPAG   96 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~-~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~-~~-~~~~i~~nGa~i~~~~~   96 (288)
                      .|+|+|||||||++     +++.+++.+ +++|++|++++ .|+|||||++..+.+++. +. ..++||+||+.|+..+.
T Consensus         3 ~kli~~DlDGTLl~-----~~~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~   77 (271)
T 1rlm_A            3 VKVIVTDMDGTFLN-----DAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGK   77 (271)
T ss_dssp             CCEEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTE
T ss_pred             ccEEEEeCCCCCCC-----CCCcCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCe
Confidence            58999999999999     567899995 99999999985 899999999999998874 32 35799999999986432


Q ss_pred             CcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHH---------------------------hhccCCeEE
Q 040896           97 SLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEK---------------------------IKTIKGATV  149 (288)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~  149 (288)
                      .....                   ....   ....++.+.+...                           ....++...
T Consensus        78 ~i~~~-------------------~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (271)
T 1rlm_A           78 QLFHG-------------------ELTR---HESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKP  135 (271)
T ss_dssp             EEEEC-------------------CCCH---HHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEE
T ss_pred             EEEEe-------------------cCCH---HHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEE
Confidence            21110                   0000   1111111111110                           000111110


Q ss_pred             -Ee------cCceEEEeccCCCcccHHHHHHHHHHHHHhCC-CeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCC
Q 040896          150 -ED------NKFCISVHFRRVDEDDINTLQEMVNSIVEAYP-NFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNA  220 (288)
Q Consensus       150 -e~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~  220 (288)
                       +.      ....+.+..   +......+.+.+.   +.++ .+.+ .++..++||+|+ +++|+.|++++++++|++.+
T Consensus       136 ~~~~~~~~~~~~ki~i~~---~~~~~~~~~~~l~---~~~~~~~~~~~s~~~~~ei~~~-~~~K~~~~~~l~~~l~i~~~  208 (271)
T 1rlm_A          136 VKDYQEIDDVLFKFSLNL---PDEQIPLVIDKLH---VALDGIMKPVTSGFGFIDLIIP-GLHKANGISRLLKRWDLSPQ  208 (271)
T ss_dssp             ESCGGGCCSCEEEEEEEC---CGGGHHHHHHHHH---HHTTTSSEEEECSTTEEEEECT-TCSHHHHHHHHHHHHTCCGG
T ss_pred             eCchhhCCCceEEEEEEc---CHHHHHHHHHHHH---HHcCCcEEEEeccCCeEEEEcC-CCChHHHHHHHHHHhCCCHH
Confidence             00      001111111   1111122222222   2233 2554 567789999999 99999999999999999987


Q ss_pred             CCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHHHHHh
Q 040896          221 SDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRLARWK  282 (288)
Q Consensus       221 ~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~~~~~  282 (288)
                         ++++|||+.||++|++.+     |++++|+|+.+.  ..|++++.+  .+||+++|++++..+
T Consensus       209 ---~~~~~GD~~nD~~m~~~a-----g~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~~~  266 (271)
T 1rlm_A          209 ---NVVAIGDSGNDAEMLKMA-----RYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNT  266 (271)
T ss_dssp             ---GEEEEECSGGGHHHHHHC-----SEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTC
T ss_pred             ---HEEEECCcHHHHHHHHHc-----CCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHHHHHhhc
Confidence               999999999999999999     899999999763  579999875  578999999988643

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=99.96  E-value=1.2e-29  Score=222.71  Aligned_cols=219  Identities=14%  Similarity=0.156  Sum_probs=147.4

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCC--CeEEEccCceeEeCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLK--NVVYAGSHGMDISTP   94 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~--~~~~i~~nGa~i~~~   94 (288)
                      .|+|+|||||||++     +++.++++++++|++|++++ .|++||||++..+.+++   ++.  +.++|++||+.|+.+
T Consensus         5 ~kli~~DlDGTLl~-----~~~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~   79 (282)
T 1rkq_A            5 IKLIAIDMDGTLLL-----PDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKA   79 (282)
T ss_dssp             CCEEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEET
T ss_pred             ceEEEEeCCCCCCC-----CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEEC
Confidence            58999999999999     56789999999999999985 89999999999888764   443  247999999999873


Q ss_pred             -CCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhh-----ccCCeEEEec----------------
Q 040896           95 -AGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIK-----TIKGATVEDN----------------  152 (288)
Q Consensus        95 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~e~~----------------  152 (288)
                       ++.....                  .....   ..+.++.+.+....-     ...+.+....                
T Consensus        80 ~~~~~i~~------------------~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (282)
T 1rkq_A           80 ADGSTVAQ------------------TALSY---DDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIP  138 (282)
T ss_dssp             TTCCEEEE------------------CCBCH---HHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCC
T ss_pred             CCCeEEEE------------------ecCCH---HHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCC
Confidence             3332210                  00110   122233333222100     0000111000                


Q ss_pred             --------------CceEEEeccCCCcccHHHHHHHHHHHHH-hCC-CeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhc
Q 040896          153 --------------KFCISVHFRRVDEDDINTLQEMVNSIVE-AYP-NFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTF  215 (288)
Q Consensus       153 --------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~-~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~  215 (288)
                                    ...+.+. .  ++    ...+.+.+.+. .++ ++.+ .++..++||+|+ +++|+.|++++++++
T Consensus       139 ~~~~~~~~~~~~~~~~ki~~~-~--~~----~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~-~~~K~~~l~~l~~~~  210 (282)
T 1rkq_A          139 LVFCEAEKMDPNTQFLKVMMI-D--EP----AILDQAIARIPQEVKEKYTVLKSAPYFLEILDK-RVNKGTGVKSLADVL  210 (282)
T ss_dssp             EEECCGGGSCTTCCBCEEEEE-C--CH----HHHHHHHHHSCHHHHHHEEEEEEETTEEEEEET-TCSHHHHHHHHHHHH
T ss_pred             ccccchhHhcccCCceEEEEE-C--CH----HHHHHHHHHHHHHhcCCEEEEEeCCceEEecCC-CCCCHHHHHHHHHHh
Confidence                          0011110 0  11    11122222111 121 2554 456789999999 999999999999999


Q ss_pred             CCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHHHHH
Q 040896          216 GFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRLARW  281 (288)
Q Consensus       216 ~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~~~~  281 (288)
                      +++.+   ++++|||+.||++|++.+     |++|+|+|+.+.  ..|++++.+  .+||+++|++++..
T Consensus       211 ~~~~~---~~~~~GD~~nD~~m~~~a-----g~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~~~  272 (282)
T 1rkq_A          211 GIKPE---EIMAIGDQENDIAMIEYA-----GVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLN  272 (282)
T ss_dssp             TCCGG---GEEEEECSGGGHHHHHHS-----SEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHTTC
T ss_pred             CCCHH---HEEEECCcHHHHHHHHHC-----CcEEEecCCcHHHHhhCCEEecCCCcchHHHHHHHHHhc
Confidence            99877   999999999999999999     899999999753  579999865  67899999998643

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=99.96  E-value=2.3e-29  Score=216.52  Aligned_cols=216  Identities=16%  Similarity=0.237  Sum_probs=144.5

Q ss_pred             EEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhc---CCC-CeEEEccCceeEeCCCCC
Q 040896           22 IVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV---QLK-NVVYAGSHGMDISTPAGS   97 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~---~~~-~~~~i~~nGa~i~~~~~~   97 (288)
                      ++||+||||||++.     +..+ +.++++|+++++...|++||||++..+.+++   +++ ..++||+||+.|+.....
T Consensus         4 ~li~~DlDGTLl~~-----~~~~-~~~~~~l~~~~~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~~   77 (244)
T 1s2o_A            4 LLLISDLDNTWVGD-----QQAL-EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGL   77 (244)
T ss_dssp             EEEEECTBTTTBSC-----HHHH-HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEE
T ss_pred             eEEEEeCCCCCcCC-----HHHH-HHHHHHHHHhcCCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCCc
Confidence            59999999999983     3333 6788899887654699999999999988875   343 257999999999874211


Q ss_pred             cccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEE----EecCceEEEeccCCCcccHHHHHH
Q 040896           98 LKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATV----EDNKFCISVHFRRVDEDDINTLQE  173 (288)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----e~~~~~~~~~~~~~~~~~~~~~~~  173 (288)
                       ...|..    .            ....+.  ...+...+    ...+....    +.+.+.+.+.+....   .....+
T Consensus        78 -~~~~~~----~------------~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~ki~~~~~~~~---~~~~~~  131 (244)
T 1s2o_A           78 -DQHWAD----Y------------LSEHWQ--RDILQAIA----DGFEALKPQSPLEQNPWKISYHLDPQA---CPTVID  131 (244)
T ss_dssp             -CHHHHH----H------------HHTTCC--HHHHHHHH----HTCTTEEECCGGGCBTTBEEEEECTTS---CTHHHH
T ss_pred             -ChHHHH----H------------Hhcccc--HHHHHHHH----HhccCccccCcccCCCeEEEEEeChhh---HHHHHH
Confidence             000100    0            000110  11111111    12222211    112344444433211   113334


Q ss_pred             HHHHHHHhC-CCeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEE
Q 040896          174 MVNSIVEAY-PNFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPII  251 (288)
Q Consensus       174 ~l~~~~~~~-~~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~  251 (288)
                      .+.+.+... .++.+ .+++.++||+|+ +++|+.|+++++++++++.+   ++++|||+.||++||+.+     |++|+
T Consensus       132 ~l~~~~~~~~~~~~~~~s~~~~lei~~~-~~~K~~~l~~l~~~~~~~~~---~~~~~GD~~nD~~m~~~~-----g~~va  202 (244)
T 1s2o_A          132 QLTEMLKETGIPVQVIFSSGKDVDLLPQ-RSNKGNATQYLQQHLAMEPS---QTLVCGDSGNDIGLFETS-----ARGVI  202 (244)
T ss_dssp             HHHHHHHTSSCCEEEEEETTTEEEEEET-TCSHHHHHHHHHHHTTCCGG---GEEEEECSGGGHHHHTSS-----SEEEE
T ss_pred             HHHHHHHhcCCCeEEEEecCceEEeccC-CCChHHHHHHHHHHhCCCHH---HEEEECCchhhHHHHhcc-----CcEEE
Confidence            455545432 24665 466789999999 99999999999999999877   999999999999999987     89999


Q ss_pred             EecCCCC--cc-------ceEEeCC--hhHHHHHHHHH
Q 040896          252 VSSVPRE--TK-------ALYSLRD--PDEVMSFLRRL  278 (288)
Q Consensus       252 v~na~~~--~~-------A~~~~~~--~~~v~~~l~~~  278 (288)
                      |+|+.+.  ..       |+|++.+  .+||+++|+++
T Consensus       203 ~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~~  240 (244)
T 1s2o_A          203 VRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAHF  240 (244)
T ss_dssp             CTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHHT
T ss_pred             EcCCcHHHHHHHhcccccceeecCCcchhHHHHHHHHh
Confidence            9999763  33       7898864  67899999875

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=99.96  E-value=1.7e-28  Score=215.98  Aligned_cols=238  Identities=16%  Similarity=0.163  Sum_probs=148.4

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcC-C-CCeEEEccCceeEeCCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ-L-KNVVYAGSHGMDISTPAGS   97 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~-~-~~~~~i~~nGa~i~~~~~~   97 (288)
                      .|+|+|||||||++     +++.+++.++++|++|++.+ .|+++|||++..+.+++. + ...++|++||+.++...+.
T Consensus         4 ikli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~   78 (288)
T 1nrw_A            4 MKLIAIDLDGTLLN-----SKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGR   78 (288)
T ss_dssp             CCEEEEECCCCCSC-----TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCC
T ss_pred             eEEEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCc
Confidence            47999999999999     56789999999999999885 899999999999888753 2 1246999999999874333


Q ss_pred             cccC--CCCC-c---ccccccCCCceeccCCCccch-----hHHHHHHHHHHH------------Hhh---ccCCeE-EE
Q 040896           98 LKQN--NPKH-E---TRTVDEQGNEVVHFQPAQEFL-----PQIQEMIQVLEE------------KIK---TIKGAT-VE  150 (288)
Q Consensus        98 ~~~~--~~~~-~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~------------~~~---~~~~~~-~e  150 (288)
                      ....  .... .   .+.+...+.....+.....+.     .+.......+..            ...   ...... +.
T Consensus        79 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (288)
T 1nrw_A           79 LYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYIN  158 (288)
T ss_dssp             EEEECCCCHHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEECS
T ss_pred             EEEEeeCCHHHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHhhhhhhhhcCCceEcC
Confidence            2110  0000 0   000000011000010000000     011111111100            000   000000 00


Q ss_pred             ---e--------cCceEEEeccCCCcccHHHHHHHHHHHHHhCCCeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCC
Q 040896          151 ---D--------NKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFN  218 (288)
Q Consensus       151 ---~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~  218 (288)
                         .        ....+.+..  .++    ...+.+.+.++.++++.+ .++..++||+|+ +++||.|++.+++++|++
T Consensus       159 ~~~~~~~~~~~~~~~ki~~~~--~~~----~~~~~~~~~l~~~~~~~~~~s~~~~lei~~~-~~~K~~~~~~~~~~~~~~  231 (288)
T 1nrw_A          159 SFQELFEADEPIDFYNILGFS--FFK----EKLEAGWKRYEHAEDLTLVSSAEHNFELSSR-KASKGQALKRLAKQLNIP  231 (288)
T ss_dssp             CGGGGTSSSSCCCEEEEEEEC--SCH----HHHHHHHHHHTTCTTEEEECSSTTEEEEEET-TCSHHHHHHHHHHHTTCC
T ss_pred             CHHHhhccccCCCceEEEEEc--CCH----HHHHHHHHHHhhCCCEEEEeeCCCcEEEecC-CCChHHHHHHHHHHhCCC
Confidence               0        001111111  111    223344444443556765 456789999999 999999999999999999


Q ss_pred             CCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHH
Q 040896          219 NASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRL  278 (288)
Q Consensus       219 ~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~  278 (288)
                      .+   ++++|||+.||++|++.+     |++|+|+|+.+.  ..|++++.+  .+||+++|+++
T Consensus       232 ~~---~~~~~GD~~nD~~m~~~a-----g~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~~  287 (288)
T 1nrw_A          232 LE---ETAAVGDSLNDKSMLEAA-----GKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL  287 (288)
T ss_dssp             GG---GEEEEESSGGGHHHHHHS-----SEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred             HH---HEEEEcCCHHHHHHHHHc-----CcEEEEcCCCHHHHhhCceeecCCCcChHHHHHHHh
Confidence            87   999999999999999999     899999998763  579999875  67999999875

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=99.96  E-value=8.3e-30  Score=221.53  Aligned_cols=214  Identities=16%  Similarity=0.221  Sum_probs=136.8

Q ss_pred             CCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhcCC------CCeEEEccCceeEe
Q 040896           19 GKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQL------KNVVYAGSHGMDIS   92 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~~~------~~~~~i~~nGa~i~   92 (288)
                      .+.|+|++||||||++     +++.++++++++|++|++.+.|+|||||++..+.+.++.      ...++||+||+.|+
T Consensus        11 ~~~kli~~DlDGTLl~-----~~~~is~~~~~al~~l~~~i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~NGa~i~   85 (262)
T 2fue_A           11 KERVLCLFDVDGTLTP-----ARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQY   85 (262)
T ss_dssp             --CEEEEEESBTTTBS-----TTSCCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEE
T ss_pred             cCeEEEEEeCccCCCC-----CCCcCCHHHHHHHHHHHhCCEEEEEcCCCHHHHHHHHhhhhcccccCCeEEECCCcEEE
Confidence            3579999999999999     467899999999999987777999999999998887764      12469999999998


Q ss_pred             CCCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHh-----hccCCeEEEecCceEEEe-c-cCCCc
Q 040896           93 TPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKI-----KTIKGATVEDNKFCISVH-F-RRVDE  165 (288)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~e~~~~~~~~~-~-~~~~~  165 (288)
                      .. +...  |..    .        +......   ..+..+.+.+....     ....+.+.+.......+. + +....
T Consensus        86 ~~-~~~i--~~~----~--------~~~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (262)
T 2fue_A           86 KH-GRLL--SKQ----T--------IQNHLGE---ELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTL  147 (262)
T ss_dssp             ET-TEEC--CCC----C--------HHHHHCH---HHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCH
T ss_pred             eC-CeEE--EEe----e--------ccccCCH---HHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCcc
Confidence            73 3322  100    0        0000011   23333444433220     111222222221111111 1 11110


Q ss_pred             c----c--H---HHHHHHHHHHH-HhCCC--eEEe-CCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcC--
Q 040896          166 D----D--I---NTLQEMVNSIV-EAYPN--FRIS-GGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGD--  230 (288)
Q Consensus       166 ~----~--~---~~~~~~l~~~~-~~~~~--~~~~-~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GD--  230 (288)
                      .    .  .   ....+.+.+.+ +.+++  +.+. ++..++||+|+ ++|||.||++|   +|++.+   ++++|||  
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~-~vsKg~al~~l---~gi~~~---~viafGDs~  220 (262)
T 2fue_A          148 EERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPE-GWDKRYCLDSL---DQDSFD---TIHFFGNET  220 (262)
T ss_dssp             HHHHHHHHHHHHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEET-TCSTTHHHHHH---TTSCCS---EEEEEESCC
T ss_pred             cccccEEEEcCCHHHHHHHHHHHHHhCCCceEEEEECCCcEEEEecC-CCCHHHHHHHH---HCCCHH---HEEEECCCC
Confidence            0    0  0   01112222222 34443  5554 46789999999 99999999999   888877   9999999  


Q ss_pred             --CcccHHHHHHHHhcCCc-eEEEEecCCC--CccceEEeCC
Q 040896          231 --DKTDEDAFKVIRHMGRG-YPIIVSSVPR--ETKALYSLRD  267 (288)
Q Consensus       231 --s~ND~~Ml~~~~~~~~g-~~v~v~na~~--~~~A~~~~~~  267 (288)
                        +.||++||+.+     | .|++|+||.+  +..|++++.+
T Consensus       221 ~~~~NDi~Ml~~~-----~~~g~av~NA~~~~k~~a~~v~~~  257 (262)
T 2fue_A          221 SPGGNDFEIFADP-----RTVGHSVVSPQDTVQRCREIFFPE  257 (262)
T ss_dssp             STTSTTHHHHHST-----TSEEEECSSHHHHHHHHHHHHCTT
T ss_pred             CCCCCCHHHHhcC-----ccCcEEecCCCHHHHHhhheeCCC
Confidence              99999999998     6 4899999966  4678888764

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.96  E-value=2e-29  Score=214.73  Aligned_cols=210  Identities=14%  Similarity=0.148  Sum_probs=146.1

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAG   96 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~   96 (288)
                      .|+|++|+||||++     .+..++++++++|++|++++ .|+++|||+...+.+++   ++. .++||+||+.++.+++
T Consensus         5 ~kli~~DlDGTLl~-----~~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~-~~~I~~NGa~i~~~~~   78 (227)
T 1l6r_A            5 IRLAAIDVDGNLTD-----RDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN-GPVFGENGGIMFDNDG   78 (227)
T ss_dssp             CCEEEEEHHHHSBC-----TTSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC-SCEEEGGGTEEECTTS
T ss_pred             eEEEEEECCCCCcC-----CCCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCC-CeEEEeCCcEEEeCCC
Confidence            48999999999999     46689999999999999885 89999999999988765   443 3699999999987433


Q ss_pred             CcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEE---EecCceEEEeccCCCcccHHHHHH
Q 040896           97 SLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATV---EDNKFCISVHFRRVDEDDINTLQE  173 (288)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~  173 (288)
                      .... |.                 .+   + .....+ +.+.... .....+.   ........+.+     .. .   +
T Consensus        79 ~~i~-~~-----------------~~---l-~~~~~i-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~-~---~  125 (227)
T 1l6r_A           79 SIKK-FF-----------------SN---E-GTNKFL-EEMSKRT-SMRSILTNRWREASTGFDIDP-----ED-V---D  125 (227)
T ss_dssp             CEEE-SS-----------------CS---H-HHHHHH-HHHTTTS-SCBCCGGGGGCSSSEEEBCCG-----GG-H---H
T ss_pred             CEEE-Ee-----------------cc---H-HHHHHH-HHHHHHh-cCCccccccceecccceEEec-----CC-H---H
Confidence            3210 10                 00   0 122223 2222100 0000000   00000000000     00 1   1


Q ss_pred             HHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEe
Q 040896          174 MVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVS  253 (288)
Q Consensus       174 ~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~  253 (288)
                      .++++.+.+ ++.+.+++.++||+|+ +++|+.++++++++++++.+   ++++|||+.||++|++.+     |++++|+
T Consensus       126 ~~~~~~~~~-~~~~~~~~~~~ei~~~-~~~K~~~l~~l~~~~~~~~~---~~~~iGD~~nD~~m~~~a-----g~~va~~  195 (227)
T 1l6r_A          126 YVRKEAESR-GFVIFYSGYSWHLMNR-GEDKAFAVNKLKEMYSLEYD---EILVIGDSNNDMPMFQLP-----VRKACPA  195 (227)
T ss_dssp             HHHHHHHTT-TEEEEEETTEEEEEET-TCSHHHHHHHHHHHTTCCGG---GEEEECCSGGGHHHHTSS-----SEEEECT
T ss_pred             HHHHHHHhc-CEEEEecCcEEEEecC-CCCHHHHHHHHHHHhCcCHH---HEEEECCcHHhHHHHHHc-----CceEEec
Confidence            233333445 5666677899999999 99999999999999999877   999999999999999999     8999999


Q ss_pred             cCCCC--ccceEEeCC--hhHHHHHHHHHH
Q 040896          254 SVPRE--TKALYSLRD--PDEVMSFLRRLA  279 (288)
Q Consensus       254 na~~~--~~A~~~~~~--~~~v~~~l~~~~  279 (288)
                      |+.+.  ..|++++.+  .+||+++|++++
T Consensus       196 n~~~~~k~~a~~v~~~~~~~Gv~~~l~~~~  225 (227)
T 1l6r_A          196 NATDNIKAVSDFVSDYSYGEEIGQIFKHFE  225 (227)
T ss_dssp             TSCHHHHHHCSEECSCCTTHHHHHHHHHTT
T ss_pred             CchHHHHHhCCEEecCCCCcHHHHHHHHHh
Confidence            99763  579999864  679999998764

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=99.96  E-value=8.5e-30  Score=219.26  Aligned_cols=211  Identities=16%  Similarity=0.246  Sum_probs=133.4

Q ss_pred             CCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhcCCC----CeEEEccCceeEeCC
Q 040896           19 GKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLK----NVVYAGSHGMDISTP   94 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~~~~----~~~~i~~nGa~i~~~   94 (288)
                      .+.|+||+||||||++     +++.++++++++|++|++++.|+|||||++..+.+.++..    ..++||+||+.|+..
T Consensus         4 ~~~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~~   78 (246)
T 2amy_A            4 PGPALCLFDVDGTLTA-----PRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKD   78 (246)
T ss_dssp             CCSEEEEEESBTTTBC-----TTSCCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEET
T ss_pred             CCceEEEEECCCCcCC-----CCcccCHHHHHHHHHHHhCCeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEeC
Confidence            4679999999999999     4678999999999999877779999999999888877742    246999999999873


Q ss_pred             CCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHH-----hhccCCeEEEecCceEEEe-c-cCCCcc-
Q 040896           95 AGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEK-----IKTIKGATVEDNKFCISVH-F-RRVDED-  166 (288)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~e~~~~~~~~~-~-~~~~~~-  166 (288)
                       +....  ..    .        +......   ..+..+.+.+...     .....+.+.+.......+. + +..... 
T Consensus        79 -~~~i~--~~----~--------l~~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (246)
T 2amy_A           79 -GKLLC--RQ----N--------IQSHLGE---ALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEE  140 (246)
T ss_dssp             -TEEEE--EC----C--------HHHHHCH---HHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHH
T ss_pred             -CcEEE--ee----e--------cccccCH---HHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhh
Confidence             33221  00    0        0000011   2333344433321     1111222222221111111 1 111100 


Q ss_pred             --c---HH---HHHHHHHHHH-HhCCC--eEEe-CCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcC----
Q 040896          167 --D---IN---TLQEMVNSIV-EAYPN--FRIS-GGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGD----  230 (288)
Q Consensus       167 --~---~~---~~~~~l~~~~-~~~~~--~~~~-~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GD----  230 (288)
                        .   +.   ...+.+.+.+ +.+++  +.+. ++..++||+|+ ++|||.||++|   ++++.+   ++++|||    
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~-~~~Kg~al~~l---~~i~~~---~viafGD~~~~  213 (246)
T 2amy_A          141 RIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPD-GWDKRYCLRHV---ENDGYK---TIYFFGDKTMP  213 (246)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHHHTTTSCEEEEEETTTEEEEEET-TCSGGGGGGGT---TTSCCS---EEEEEECSCC-
T ss_pred             hhhheeecCCHHHHHHHHHHHHHhcCCCcEEEEEcCCcEEEEecC-CCchHHHHHHH---hCCCHH---HEEEECCCCCC
Confidence              0   00   1112222222 33543  5554 46789999999 99999999999   888877   9999999    


Q ss_pred             CcccHHHHHHHHhcCCce-EEEEecCCCC--ccceEE
Q 040896          231 DKTDEDAFKVIRHMGRGY-PIIVSSVPRE--TKALYS  264 (288)
Q Consensus       231 s~ND~~Ml~~~~~~~~g~-~v~v~na~~~--~~A~~~  264 (288)
                      +.||++||+.+     |+ |++|+||.+.  ..|+||
T Consensus       214 ~~ND~~Ml~~a-----~~ag~av~Na~~~vk~~A~~v  245 (246)
T 2amy_A          214 GGNDHEIFTDP-----RTMGYSVTAPEDTRRICELLF  245 (246)
T ss_dssp             --CCCHHHHCT-----TEEEEECSSHHHHHHHHHHHC
T ss_pred             CCCcHHHHHhC-----CcceEEeeCCCHHHHHHHhhc
Confidence            99999999998     77 9999999663  567665

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=99.96  E-value=7e-29  Score=216.24  Aligned_cols=216  Identities=17%  Similarity=0.185  Sum_probs=143.9

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAG   96 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~   96 (288)
                      .|+|+|||||||++     +++.+++.++++|++ ++.+ .|++||||++..+.+++   ++...++|++||+.++..++
T Consensus         2 ikli~~DlDGTLl~-----~~~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~   75 (268)
T 1nf2_A            2 YRVFVFDLDGTLLN-----DNLEISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEE   75 (268)
T ss_dssp             BCEEEEECCCCCSC-----TTSCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTT
T ss_pred             ccEEEEeCCCcCCC-----CCCccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCC
Confidence            47999999999999     567899999999999 8775 89999999999988875   44322799999999987433


Q ss_pred             CcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhh-----ccCCeEEE---------------------
Q 040896           97 SLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIK-----TIKGATVE---------------------  150 (288)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~e---------------------  150 (288)
                      ......                  ....   ....++.+.+.....     ...+.+..                     
T Consensus        76 ~~i~~~------------------~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (268)
T 1nf2_A           76 GVILNE------------------KIPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEP  134 (268)
T ss_dssp             EEEEEC------------------CBCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECT
T ss_pred             CEEEec------------------CCCH---HHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecC
Confidence            322100                  0000   111112221111000     00000000                     


Q ss_pred             --------ecCceEEEeccCCCcccHHHHHHHHHHHH-HhC-CCeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCC
Q 040896          151 --------DNKFCISVHFRRVDEDDINTLQEMVNSIV-EAY-PNFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNN  219 (288)
Q Consensus       151 --------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~-~~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~  219 (288)
                              .....+.+. .  ++    ...+.+.+.+ +.+ +.+.+ .++..++||+|+ +++|+.+++++++++++++
T Consensus       135 ~~~~~~~~~~~~ki~~~-~--~~----~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~-~~~K~~~~~~~~~~~~~~~  206 (268)
T 1nf2_A          135 NLSELVSKMGTTKLLLI-D--TP----ERLDELKEILSERFKDVVKVFKSFPTYLEIVPK-NVDKGKALRFLRERMNWKK  206 (268)
T ss_dssp             THHHHHHHHCBSEEEEE-C--CH----HHHHHHHHHHHHHHTTTSEEEEEETTEEEEECT-TCCHHHHHHHHHHHHTCCG
T ss_pred             CHHHhcccCCceEEEEE-C--CH----HHHHHHHHHHHHHhcCCEEEEEecCceEEEeCC-CCChHHHHHHHHHHcCCCH
Confidence                    000111111 0  11    1122222222 222 24655 356789999999 9999999999999999987


Q ss_pred             CCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHHH
Q 040896          220 ASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRLA  279 (288)
Q Consensus       220 ~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~~  279 (288)
                      +   ++++|||+.||++|++.+     |++++|+|+.++  ..|++++.+  .+||+++|++++
T Consensus       207 ~---~~~~~GD~~nD~~~~~~a-----g~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~~  262 (268)
T 1nf2_A          207 E---EIVVFGDNENDLFMFEEA-----GLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS  262 (268)
T ss_dssp             G---GEEEEECSHHHHHHHTTC-----SEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred             H---HeEEEcCchhhHHHHHHc-----CCEEEecCCCHHHHhhCCEEEccCCcchHHHHHHHHH
Confidence            7   999999999999999999     899999998753  579999875  679999998764

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=99.96  E-value=3.5e-28  Score=210.66  Aligned_cols=224  Identities=17%  Similarity=0.184  Sum_probs=146.7

Q ss_pred             EEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcCCCCeEEEccCceeEeCCCCCcccC
Q 040896           23 VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQN  101 (288)
Q Consensus        23 li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~~~~~  101 (288)
                      +|+|||||||++     +. .+++.+.++|++|++.+ +|+++|||+...+. .+++. .++|++||+.++.+.+.....
T Consensus         2 li~~DlDGTLl~-----~~-~i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~-~l~~~-~~~i~~nGa~i~~~~~~~~~~   73 (259)
T 3zx4_A            2 IVFTDLDGTLLD-----ER-GELGPAREALERLRALGVPVVPVTAKTRKEVE-ALGLE-PPFIVENGGGLYLPRDWPVRA   73 (259)
T ss_dssp             EEEECCCCCCSC-----SS-SSCSTTHHHHHHHHHTTCCEEEBCSSCHHHHH-HTTCC-SSEEEGGGTEEEEETTCSSCC
T ss_pred             EEEEeCCCCCcC-----CC-cCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH-HcCCC-CcEEEECCcEEEeCCCCcccc
Confidence            799999999999     45 79999999999999885 99999999999998 66654 569999999998765430000


Q ss_pred             CCCCcccccccCCCceeccCCCccchhHHHHHHHHHHH-Hhhcc---C-----------CeEE------EecCceEEEec
Q 040896          102 NPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEE-KIKTI---K-----------GATV------EDNKFCISVHF  160 (288)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~-----------~~~~------e~~~~~~~~~~  160 (288)
                      |....        ...+......  ...+.++.+.+.. +....   .           +...      ....+...+.+
T Consensus        74 ~~~~~--------~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (259)
T 3zx4_A           74 GRPKG--------GYRVVSLAWP--YRKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETLVL  143 (259)
T ss_dssp             SEEET--------TEEEEECSCC--HHHHHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCC
T ss_pred             cccCC--------ceEEEEcCCC--HHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhccccceeEEe
Confidence            10000        0000000000  0112223322221 10000   0           0000      00000111111


Q ss_pred             cCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCC--CCCceeEEEcCCcccHHHH
Q 040896          161 RRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNN--ASDFLPLYIGDDKTDEDAF  238 (288)
Q Consensus       161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~--~~~~~vv~~GDs~ND~~Ml  238 (288)
                        .++     ..+.+.+.+... ++.+..+..++||.|+  ++|+.|+++++++++++.  +   ++++||||.||++||
T Consensus       144 --~~~-----~~~~~~~~l~~~-~~~~~~s~~~~ei~~~--~~K~~~l~~l~~~~~i~~~~~---~~~~~GD~~nD~~m~  210 (259)
T 3zx4_A          144 --CPE-----EVEAVLEALEAV-GLEWTHGGRFYHAAKG--ADKGRAVARLRALWPDPEEAR---FAVGLGDSLNDLPLF  210 (259)
T ss_dssp             --CTT-----THHHHHHHHHHT-TCEEEECSSSEEEESS--CCHHHHHHHHHHTCSSHHHHT---SEEEEESSGGGHHHH
T ss_pred             --CcH-----HHHHHHHHHHHC-CcEEEecCceEEEcCC--CCHHHHHHHHHHHhCCCCCCc---eEEEEeCCHHHHHHH
Confidence              111     123444444444 4666555567899986  899999999999999986  7   999999999999999


Q ss_pred             HHHHhcCCceEEEEecCCCCccceEEeCC--hhHHHHHHHHHHHHhh
Q 040896          239 KVIRHMGRGYPIIVSSVPRETKALYSLRD--PDEVMSFLRRLARWKK  283 (288)
Q Consensus       239 ~~~~~~~~g~~v~v~na~~~~~A~~~~~~--~~~v~~~l~~~~~~~~  283 (288)
                      +.+     |++|+|+||.+ ..|+|++.+  .+||+++|++++..++
T Consensus       211 ~~a-----g~~va~~na~~-~~~~~~~~~~~~~gv~~~~~~~~~~~~  251 (259)
T 3zx4_A          211 RAV-----DLAVYVGRGDP-PEGVLATPAPGPEGFRYAVERYLLPRL  251 (259)
T ss_dssp             HTS-----SEEEECSSSCC-CTTCEECSSCHHHHHHHHHHHHTTTC-
T ss_pred             HhC-----CCeEEeCChhh-cCCcEEeCCCCchHHHHHHHHHHHhCc
Confidence            999     89999999988 778888764  6789999999986554

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=99.95  E-value=3.8e-28  Score=210.55  Aligned_cols=220  Identities=14%  Similarity=0.169  Sum_probs=143.7

Q ss_pred             EEEEEecCCccccCcCCCCCCC-CCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcC-CC----CeEEEccCceeEeCC
Q 040896           22 IVVFLDYDGTLSPIVEDPDKAF-MSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ-LK----NVVYAGSHGMDISTP   94 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~~~~~-i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~-~~----~~~~i~~nGa~i~~~   94 (288)
                      |+|+|||||||++     ++.. +++.++++|++|++.+ .|++||||+ ..+.+++. +.    ..++|++||+.++..
T Consensus         3 kli~~DlDGTLl~-----~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~   76 (261)
T 2rbk_A            3 KALFFDIDGTLVS-----FETHRIPSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVG   76 (261)
T ss_dssp             CEEEECSBTTTBC-----TTTSSCCHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEET
T ss_pred             cEEEEeCCCCCcC-----CCCCcCCHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEEC
Confidence            7999999999999     4556 9999999999999985 899999999 88776642 21    235899999999863


Q ss_pred             CCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhh-----ccCCeEEEecCceEE-EeccCCC----
Q 040896           95 AGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIK-----TIKGATVEDNKFCIS-VHFRRVD----  164 (288)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~e~~~~~~~-~~~~~~~----  164 (288)
                       +.....                  .....   +.+.++.+.+....-     ...+.+.......+. ..++...    
T Consensus        77 -~~~i~~------------------~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (261)
T 2rbk_A           77 -EEVIYK------------------SAIPQ---EEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVI  134 (261)
T ss_dssp             -TEEEEE------------------CCCCH---HHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCC
T ss_pred             -CEEEEe------------------cCCCH---HHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCC
Confidence             332110                  00111   233334443332100     001111110000000 0000000    


Q ss_pred             ----------cccHH----HHHHHHHHHHHhCCCeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEc
Q 040896          165 ----------EDDIN----TLQEMVNSIVEAYPNFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIG  229 (288)
Q Consensus       165 ----------~~~~~----~~~~~l~~~~~~~~~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~G  229 (288)
                                ....+    .......++.+.++++.+ .+++.++||+|+ +++|+.+++++++++|++++   ++++||
T Consensus       135 ~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~-~~~K~~~~~~~~~~~~~~~~---~~~~iG  210 (261)
T 2rbk_A          135 PTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAFADVTAK-GDTKQKGIDEIIRHFGIKLE---ETMSFG  210 (261)
T ss_dssp             CBCCHHHHHTSCCSEEEECCCHHHHHHHGGGSTTCEEECSSTTCCEEEST-TCSHHHHHHHHHHHHTCCGG---GEEEEE
T ss_pred             CccccchhccCceeEEEEEeCHHHHHHHHHhcCCeEEEEecCCeEEecCC-CCChHHHHHHHHHHcCCCHH---HEEEEC
Confidence                      00000    000112223344555665 456789999999 99999999999999999887   999999


Q ss_pred             CCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCCh--hHHHHHHHHH
Q 040896          230 DDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRDP--DEVMSFLRRL  278 (288)
Q Consensus       230 Ds~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~~--~~v~~~l~~~  278 (288)
                      |+.||++|++.+     |++++|+|+.+.  ..|++++.+.  +||+++|+++
T Consensus       211 D~~nD~~~~~~a-----g~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~  258 (261)
T 2rbk_A          211 DGGNDISMLRHA-----AIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF  258 (261)
T ss_dssp             CSGGGHHHHHHS-----SEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred             CCHHHHHHHHHc-----CceEEecCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence            999999999999     899999998763  5799998864  5699999875

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.95  E-value=2.9e-27  Score=201.61  Aligned_cols=212  Identities=16%  Similarity=0.179  Sum_probs=148.8

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAG   96 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~   96 (288)
                      .|+|+|||||||++     ++..+++.++++|++|++++ .|+++|||+...+.+++   +++ .++|++||+.++.. +
T Consensus         3 ~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~-~~~i~~nGa~i~~~-~   75 (231)
T 1wr8_A            3 IKAISIDIDGTITY-----PNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTS-GPVVAEDGGAISYK-K   75 (231)
T ss_dssp             CCEEEEESTTTTBC-----TTSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC-SCEEEGGGTEEEET-T
T ss_pred             eeEEEEECCCCCCC-----CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCC-CeEEEeCCcEEEeC-C
Confidence            47999999999999     46789999999999999885 99999999999887764   443 35899999998863 3


Q ss_pred             CcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEe-cCc---eEEEeccCCCcccHHHHH
Q 040896           97 SLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVED-NKF---CISVHFRRVDEDDINTLQ  172 (288)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~~~---~~~~~~~~~~~~~~~~~~  172 (288)
                      ...  |.                ...     ....++.+.+..   ..++..... ..+   .+.+.....+    ..  
T Consensus        76 ~~~--~~----------------~~l-----~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--  123 (231)
T 1wr8_A           76 KRI--FL----------------ASM-----DEEWILWNEIRK---RFPNARTSYTMPDRRAGLVIMRETIN----VE--  123 (231)
T ss_dssp             EEE--ES----------------CCC-----SHHHHHHHHHHH---HCTTCCBCTTGGGCSSCEEECTTTSC----HH--
T ss_pred             EEE--Ee----------------ccH-----HHHHHHHHHHHH---hCCCceEEecCCCceeeEEEECCCCC----HH--
Confidence            221  10                001     123333333331   122221100 000   1112110111    11  


Q ss_pred             HHHHHHHHhCC-CeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEE
Q 040896          173 EMVNSIVEAYP-NFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPII  251 (288)
Q Consensus       173 ~~l~~~~~~~~-~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~  251 (288)
                       .++++++.++ .+.+.++..++|+.|+ +.+|+.+++++++++|++++   ++++|||+.||++|++.+     |++++
T Consensus       124 -~~~~~~~~~~~~~~~~~~~~~~ei~~~-~~~K~~~~~~~~~~~~~~~~---~~~~iGD~~nD~~~~~~a-----g~~v~  193 (231)
T 1wr8_A          124 -TVREIINELNLNLVAVDSGFAIHVKKP-WINKGSGIEKASEFLGIKPK---EVAHVGDGENDLDAFKVV-----GYKVA  193 (231)
T ss_dssp             -HHHHHHHHTTCSCEEEECSSCEEEECT-TCCHHHHHHHHHHHHTSCGG---GEEEEECSGGGHHHHHHS-----SEEEE
T ss_pred             -HHHHHHHhcCCcEEEEecCcEEEEecC-CCChHHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHc-----CCeEE
Confidence             2333334443 3555577789999999 99999999999999999877   999999999999999999     89999


Q ss_pred             EecCCC--CccceEEeCC--hhHHHHHHHHHHHH
Q 040896          252 VSSVPR--ETKALYSLRD--PDEVMSFLRRLARW  281 (288)
Q Consensus       252 v~na~~--~~~A~~~~~~--~~~v~~~l~~~~~~  281 (288)
                      |+|+.+  +..|++++.+  .+||+++|++++..
T Consensus       194 ~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~~~~~  227 (231)
T 1wr8_A          194 VAQAPKILKENADYVTKKEYGEGGAEAIYHILEK  227 (231)
T ss_dssp             CTTSCHHHHTTCSEECSSCHHHHHHHHHHHHHHH
T ss_pred             ecCCCHHHHhhCCEEecCCCcchHHHHHHHHHHh
Confidence            999865  3579999875  56899999998753

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=99.95  E-value=8e-28  Score=207.25  Aligned_cols=212  Identities=17%  Similarity=0.276  Sum_probs=136.3

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcCCC----CeEEEccCceeEeCC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQLK----NVVYAGSHGMDISTP   94 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~~~----~~~~i~~nGa~i~~~   94 (288)
                      ..|+|+|||||||++     +++.++++++++|++|++++ .|++||||++..+.+.++..    ..++||+||+.|+..
T Consensus         3 ~~kli~~DlDGTLl~-----~~~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~   77 (246)
T 3f9r_A            3 KRVLLLFDVDGTLTP-----PRLCQTDEMRALIKRARGAGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRN   77 (246)
T ss_dssp             CSEEEEECSBTTTBS-----TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEET
T ss_pred             CceEEEEeCcCCcCC-----CCCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEEC
Confidence            369999999999999     56789999999999999995 89999999999988888742    357999999999975


Q ss_pred             CCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHh-----hccCCeEEEecCceEEEec--cCCCccc
Q 040896           95 AGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKI-----KTIKGATVEDNKFCISVHF--RRVDEDD  167 (288)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~e~~~~~~~~~~--~~~~~~~  167 (288)
                      +....   ..            .+......   .....+.+.+..+.     ...++.+++.+...+.+..  +......
T Consensus        78 ~~~i~---~~------------~i~~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (246)
T 3f9r_A           78 GLEIH---RQ------------SLLNALGN---DRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAE  139 (246)
T ss_dssp             TEEEE---EC------------CHHHHTCH---HHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHH
T ss_pred             CEEEE---Ee------------eccccCCH---HHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhh
Confidence            32211   00            00000111   23334444433221     1123345554443333211  1111000


Q ss_pred             ------HH-H--HHHHHHH-HHHhCCC--eE-EeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCC---
Q 040896          168 ------IN-T--LQEMVNS-IVEAYPN--FR-ISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDD---  231 (288)
Q Consensus       168 ------~~-~--~~~~l~~-~~~~~~~--~~-~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs---  231 (288)
                            +. .  ..+.+.+ +.+.+++  +. +.+++.++||+|+ |+|||.||++|++    +.+   ++++|||+   
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~sg~~~leI~~~-gv~Kg~al~~L~~----~~~---ev~afGD~~~~  211 (246)
T 3f9r_A          140 RDEFEVYDNEHRVRASLIAELENSFPDFGLKYSIGGQISFDVFPV-GWDKTYCLQFVED----DFE---EIHFFGDKTQE  211 (246)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHHHCGGGCEEEEEETTTEEEEEET-TCSGGGGGGGTTT----TCS---EEEEEESCCST
T ss_pred             ceeeeEecccchHHHHHHHHHHhhCcCCcEEEEecCCeEEEEEeC-CCCHHHHHHHHHc----Ccc---cEEEEeCCCCC
Confidence                  00 0  1223333 3335654  45 4678899999999 9999999999999    455   99999996   


Q ss_pred             -cccHHHHHHHHhcCCceEEEEecCCCCccceEEeCChhHHHHHHHHHH
Q 040896          232 -KTDEDAFKVIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFLRRLA  279 (288)
Q Consensus       232 -~ND~~Ml~~~~~~~~g~~v~v~na~~~~~A~~~~~~~~~v~~~l~~~~  279 (288)
                       .||++||+.+.    ..+++|+|             ++++...|+.++
T Consensus       212 g~NDi~Ml~~a~----~~g~~v~n-------------~~~~~~~~~~~~  243 (246)
T 3f9r_A          212 GGNDYEIYTDKR----TIGHKVTS-------------YKDTIAEVEKII  243 (246)
T ss_dssp             TSTTHHHHTCTT----SEEEECSS-------------HHHHHHHHHHHH
T ss_pred             CCCCHHHHhCCC----ccEEEeCC-------------HHHHHHHHHHHh
Confidence             99999999772    24666664             455555566655

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=99.94  E-value=2.6e-27  Score=204.25  Aligned_cols=211  Identities=17%  Similarity=0.203  Sum_probs=128.6

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAG   96 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~   96 (288)
                      .|+|||||||||+ ..     ..++ +++++|++|++++ .|+|||||++..+..++   +++ .++||+||+.|+.+++
T Consensus         2 ikli~~DlDGTLl-~~-----~~~~-~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~-~~~I~~NGa~i~~~~~   73 (249)
T 2zos_A            2 IRLIFLDIDKTLI-PG-----YEPD-PAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE-TPFISENGSAIFIPKG   73 (249)
T ss_dssp             EEEEEECCSTTTC-TT-----SCSG-GGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC-SCEEETTTTEEECCTT
T ss_pred             ccEEEEeCCCCcc-CC-----CCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-ccEEEeCCeEEEccCC
Confidence            4899999999999 42     2344 4999999999886 99999999999888765   443 4799999999997642


Q ss_pred             Cccc---CCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHH------hh-------ccCCeEE------EecCc
Q 040896           97 SLKQ---NNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEK------IK-------TIKGATV------EDNKF  154 (288)
Q Consensus        97 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~------e~~~~  154 (288)
                      ....   .|..        .+..........   ..+..+.+.+...      ..       ...+...      ....+
T Consensus        74 ~~~~~~~~~~~--------~~~~i~~~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (249)
T 2zos_A           74 YFPFDVKGKEV--------GNYIVIELGIRV---EKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREY  142 (249)
T ss_dssp             CCC------CC--------CCCCEEECSCCH---HHHHHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSS
T ss_pred             ccccccccccc--------CceEEEecCCCH---HHHHHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhhhhh
Confidence            1000   0000        000000001111   1222233222211      00       0000000      00001


Q ss_pred             eEEEeccCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCC-CCCCCceeEEEcCCcc
Q 040896          155 CISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGF-NNASDFLPLYIGDDKT  233 (288)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~-~~~~~~~vv~~GDs~N  233 (288)
                      ...+.+.. +..   . .+.+    +.. ++.+.++..++||+|  ++|||.||++|++++++ +.+   ++++|||+.|
T Consensus       143 ~~~~~~~~-~~~---~-~~~l----~~~-~~~~~~s~~~~ei~~--g~sKg~al~~l~~~~~~~~~~---~viafGD~~N  207 (249)
T 2zos_A          143 SETIFEWS-RDG---W-EEVL----VEG-GFKVTMGSRFYTVHG--NSDKGKAAKILLDFYKRLGQI---ESYAVGDSYN  207 (249)
T ss_dssp             CEEEEECS-SSC---H-HHHH----HHT-TCEEEECSSSEEEEC--SCCHHHHHHHHHHHHHTTSCE---EEEEEECSGG
T ss_pred             cCceEecC-CHH---H-HHHH----HhC-CEEEEecCCeEEEeC--CCChHHHHHHHHHHhccCCCc---eEEEECCCcc
Confidence            01111111 111   1 1222    223 466555557899997  79999999999999988 766   9999999999


Q ss_pred             cHHHHHHHHhcCCceEEEEecCC-CC--ccceEEeCChhH
Q 040896          234 DEDAFKVIRHMGRGYPIIVSSVP-RE--TKALYSLRDPDE  270 (288)
Q Consensus       234 D~~Ml~~~~~~~~g~~v~v~na~-~~--~~A~~~~~~~~~  270 (288)
                      |++||+.+     |++|+|+|+. ++  ..|+++++++++
T Consensus       208 Di~Ml~~a-----g~~va~gna~~~~~~~~a~~v~~~~~~  242 (249)
T 2zos_A          208 DFPMFEVV-----DKVFIVGSLKHKKAQNVSSIIDVLEVI  242 (249)
T ss_dssp             GHHHHTTS-----SEEEEESSCCCTTEEEESSHHHHHHHH
T ss_pred             cHHHHHhC-----CcEEEeCCCCccccchhceEEeccccc
Confidence            99999999     8999999997 43  467877765443

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.89  E-value=4.6e-23  Score=180.95  Aligned_cols=229  Identities=14%  Similarity=0.250  Sum_probs=149.1

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHH--------hhcC-CEEEEcCCChhhHhhhc---CCC--CeEEEc
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV--------AHFF-PTAIVSGRCLDKVSRFV---QLK--NVVYAG   85 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L--------~~~~-~v~i~TGR~~~~l~~~~---~~~--~~~~i~   85 (288)
                      ..++|+|||||||++     +.  +++.+..++.++        ++.+ .++++|||+...+..++   +++  ...+++
T Consensus        21 ~~kliifDlDGTLld-----s~--i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~   93 (289)
T 3gyg_A           21 PQYIVFCDFDETYFP-----HT--IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIAS   93 (289)
T ss_dssp             CSEEEEEETBTTTBC-----SS--CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEE
T ss_pred             CCeEEEEECCCCCcC-----CC--CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEee
Confidence            468999999999999     33  788888888843        3444 89999999999888764   442  345888


Q ss_pred             cCceeEeCCC--CCccc--CCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccC---CeEEEecCceEEE
Q 040896           86 SHGMDISTPA--GSLKQ--NNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIK---GATVEDNKFCISV  158 (288)
Q Consensus        86 ~nGa~i~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~e~~~~~~~~  158 (288)
                      .+|+.++...  +....  .|..            .+ ... .. .+.+.++.+.+.... ...   ....+...+.+.+
T Consensus        94 ~~g~~i~~~~~ng~~~~~~~~~~------------~~-~~~-~~-~~~v~e~l~~l~~~~-g~~l~~~t~~~~~~~~~~~  157 (289)
T 3gyg_A           94 DLGTEITYFSEHNFGQQDNKWNS------------RI-NEG-FS-KEKVEKLVKQLHENH-NILLNPQTQLGKSRYKHNF  157 (289)
T ss_dssp             TTTTEEEECCSSSTTEECHHHHH------------HH-HTT-CC-HHHHHHHHHHHHHHS-SCCCEEGGGTCGGGTTCCE
T ss_pred             cCCceEEEEcCCCcEeecCchhh------------hh-ccc-CC-HHHHHHHHHHHHhhh-CceeeecccccccceEEEE
Confidence            9888887632  22110  0100            00 000 00 123334444443210 010   0001122234455


Q ss_pred             eccCCCcccHHHHHHHHHHHHHhCCCe--EE-eC--------CceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEE
Q 040896          159 HFRRVDEDDINTLQEMVNSIVEAYPNF--RI-SG--------GKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLY  227 (288)
Q Consensus       159 ~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~-~~--------~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~  227 (288)
                      +++..+..........+.++++.+ ++  .+ .+        +..++|+.|. +.+|+.+++++++++|++++   ++++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~~~~~~~~~~~~---~~~~  232 (289)
T 3gyg_A          158 YYQEQDEINDKKNLLAIEKICEEY-GVSVNINRCNPLAGDPEDSYDVDFIPI-GTGKNEIVTFMLEKYNLNTE---RAIA  232 (289)
T ss_dssp             EEECCCHHHHHHHHHHHHHHHHHH-TEEEEEEECCGGGTCCTTEEEEEEEES-CCSHHHHHHHHHHHHTCCGG---GEEE
T ss_pred             EEeccccccchHHHHHHHHHHHHc-CCCEEEEEccccccCCCCceEEEEEeC-CCCHHHHHHHHHHHcCCChh---hEEE
Confidence            555433211112334455556554 33  23 22        3378999999 99999999999999999887   9999


Q ss_pred             EcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHHHHH
Q 040896          228 IGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRLARW  281 (288)
Q Consensus       228 ~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~~~~  281 (288)
                      ||||.||++|++.+     |++++|+|+.+.  ..|++++.+  .+||+++|++++..
T Consensus       233 ~GDs~~D~~~~~~a-----g~~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~~~~~~  285 (289)
T 3gyg_A          233 FGDSGNDVRMLQTV-----GNGYLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIGF  285 (289)
T ss_dssp             EECSGGGHHHHTTS-----SEEEECTTCCHHHHHHCCCBCSSCHHHHHHHHHHHHTCC
T ss_pred             EcCCHHHHHHHHhC-----CcEEEECCccHHHHHhCCEEcCCCCcCHHHHHHHHHHHH
Confidence            99999999999999     899999998763  578998875  56799999988753

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=99.67  E-value=1.9e-19  Score=161.35  Aligned_cols=83  Identities=17%  Similarity=0.253  Sum_probs=63.6

Q ss_pred             EEE--EeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCC-
Q 040896          193 VME--IRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRD-  267 (288)
Q Consensus       193 ~ie--I~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~-  267 (288)
                      ++|  +.|+ +++|+.|++.+-..-+..     .+++||||.||++||+.+.+.+ |++|+| |+.+  +..|++++.+ 
T Consensus       196 ~~e~ii~~~-g~~K~~al~gi~~~~~~~-----~via~GDs~NDi~ml~~A~~~~-g~~vam-na~~~lk~~Ad~v~~~~  267 (332)
T 1y8a_A          196 IVESVKAVG-AGEKAKIMRGYCESKGID-----FPVVVGDSISDYKMFEAARGLG-GVAIAF-NGNEYALKHADVVIISP  267 (332)
T ss_dssp             HHHTCBCCC-HHHHHHHHHHHHHHHTCS-----SCEEEECSGGGHHHHHHHHHTT-CEEEEE-SCCHHHHTTCSEEEECS
T ss_pred             eeeEEecCC-CCCHHHHHhccChhhcCc-----eEEEEeCcHhHHHHHHHHhhcC-CeEEEe-cCCHHHHhhCcEEecCC
Confidence            444  8999 999999999332211111     3999999999999999995433 699999 9876  3689999864 


Q ss_pred             -hhHHHHHHHHHHHHhh
Q 040896          268 -PDEVMSFLRRLARWKK  283 (288)
Q Consensus       268 -~~~v~~~l~~~~~~~~  283 (288)
                       .+||+++|++++...+
T Consensus       268 ~~dGV~~~l~~~~~~~~  284 (332)
T 1y8a_A          268 TAMSEAKVIELFMERKE  284 (332)
T ss_dssp             STHHHHHHHHHHHHHGG
T ss_pred             CCCHHHHHHHHHHHcCC
Confidence             7899999999875443

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.65  E-value=3e-16  Score=135.58  Aligned_cols=74  Identities=15%  Similarity=0.138  Sum_probs=58.9

Q ss_pred             EEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCC-cccHHHHHHHHhcCCceEEEEec----CCC--Cc---cceEE
Q 040896          195 EIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDD-KTDEDAFKVIRHMGRGYPIIVSS----VPR--ET---KALYS  264 (288)
Q Consensus       195 eI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs-~ND~~Ml~~~~~~~~g~~v~v~n----a~~--~~---~A~~~  264 (288)
                      ++.+. +..|+.+++.+++++|++++   ++++|||+ .||++|++.+     |+++++.+    +.+  +.   .|+|+
T Consensus       177 ~~~~~-~kp~~~~~~~~~~~lgi~~~---~~~~iGD~~~~Di~~~~~a-----G~~~~~v~~g~~~~~~~~~~~~~~d~v  247 (266)
T 3pdw_A          177 QPVFI-GKPESIIMEQAMRVLGTDVS---ETLMVGDNYATDIMAGINA-----GMDTLLVHTGVTKREHMTDDMEKPTHA  247 (266)
T ss_dssp             CCEEC-STTSSHHHHHHHHHHTCCGG---GEEEEESCTTTHHHHHHHH-----TCEEEEECCC------CCTTSCCCSEE
T ss_pred             Ccccc-CCCCHHHHHHHHHHcCCChh---hEEEECCCcHHHHHHHHHC-----CCeEEEECCCCCChHHHHhcCCCCCEE
Confidence            44566 78999999999999999987   99999999 8999999999     87655544    222  22   59999


Q ss_pred             eCChhHHHHHHHH
Q 040896          265 LRDPDEVMSFLRR  277 (288)
Q Consensus       265 ~~~~~~v~~~l~~  277 (288)
                      +.+..++...++.
T Consensus       248 ~~~~~el~~~~~~  260 (266)
T 3pdw_A          248 IDSLTEWIPYIEG  260 (266)
T ss_dssp             ESSGGGGHHHHHH
T ss_pred             eCCHHHHHHHhhc
Confidence            9999888776653

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.62  E-value=6.1e-16  Score=126.36  Aligned_cols=73  Identities=22%  Similarity=0.241  Sum_probs=62.0

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHH-HHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVM-SFLRR  277 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~-~~l~~  277 (288)
                      +|+.+++.+++.++++++   ++++|||+.||++|++.+     |++++|+|+.+.  ..|++++.+  .+++. ++++.
T Consensus        83 ~k~~~~~~~~~~~~~~~~---~~~~vGD~~~Di~~~~~a-----g~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~  154 (180)
T 1k1e_A           83 EKETACFDLMKQAGVTAE---QTAYIGDDSVDLPAFAAC-----GTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDM  154 (180)
T ss_dssp             CHHHHHHHHHHHHTCCGG---GEEEEECSGGGHHHHHHS-----SEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHH
T ss_pred             CcHHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHc-----CCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHH
Confidence            799999999999999877   999999999999999999     899999988653  679999875  55777 77777


Q ss_pred             HHHHhh
Q 040896          278 LARWKK  283 (288)
Q Consensus       278 ~~~~~~  283 (288)
                      ++..|.
T Consensus       155 ~l~~~~  160 (180)
T 1k1e_A          155 ILQAQG  160 (180)
T ss_dssp             HHHHTT
T ss_pred             HHHhcC
Confidence            766543

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.62  E-value=1.9e-15  Score=130.62  Aligned_cols=71  Identities=21%  Similarity=0.256  Sum_probs=57.3

Q ss_pred             eCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCC-cccHHHHHHHHhcCCce---EEEEecCCCC--c--------cce
Q 040896          197 RPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDD-KTDEDAFKVIRHMGRGY---PIIVSSVPRE--T--------KAL  262 (288)
Q Consensus       197 ~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs-~ND~~Ml~~~~~~~~g~---~v~v~na~~~--~--------~A~  262 (288)
                      ... +..|+.+++.+++++|++++   ++++|||+ .||+.|.+.+     |+   .|.+|++..+  .        .++
T Consensus       183 ~~~-~kp~~~~~~~~~~~~~~~~~---~~~~vGD~~~~Di~~~~~~-----g~~~~~v~~g~~~~~~~~~~~~~~~~~~d  253 (268)
T 3qgm_A          183 VVV-GKPSEVIMREALDILGLDAK---DVAVVGDQIDVDVAAGKAI-----GAETVLVLTGVTTRENLDQMIERHGLKPD  253 (268)
T ss_dssp             EEC-STTSHHHHHHHHHHHTCCGG---GEEEEESCTTTHHHHHHHH-----TCEEEEESSSSCCTTTHHHHHHHHTCCCS
T ss_pred             eec-CCCCHHHHHHHHHHhCCCch---hEEEECCCchHHHHHHHHC-----CCcEEEECCCCCCHHHHHhhccccCCCCC
Confidence            345 67899999999999999987   99999999 6999999999     63   4555555432  2        689


Q ss_pred             EEeCChhHHHHHHH
Q 040896          263 YSLRDPDEVMSFLR  276 (288)
Q Consensus       263 ~~~~~~~~v~~~l~  276 (288)
                      |++++..++.++|+
T Consensus       254 ~v~~~~~el~~~l~  267 (268)
T 3qgm_A          254 YVFNSLKDMVEALE  267 (268)
T ss_dssp             EEESSHHHHHHTC-
T ss_pred             EEECCHHHHHHHHh
Confidence            99999999887764

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.59  E-value=1.7e-15  Score=130.96  Aligned_cols=70  Identities=17%  Similarity=0.161  Sum_probs=56.9

Q ss_pred             eCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCC-cccHHHHHHHHhcCCceEEEE-ecCCCC--------ccceEEeC
Q 040896          197 RPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDD-KTDEDAFKVIRHMGRGYPIIV-SSVPRE--------TKALYSLR  266 (288)
Q Consensus       197 ~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs-~ND~~Ml~~~~~~~~g~~v~v-~na~~~--------~~A~~~~~  266 (288)
                      .+. +.+|+.+++.+++++|++++   ++++|||+ .||++|++.+     |+.+++ ..+...        ..++++++
T Consensus       191 ~~~-~kpk~~~~~~~~~~lgi~~~---e~i~iGD~~~nDi~~a~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~~i~  261 (271)
T 1vjr_A          191 LIA-GKPNPLVVDVISEKFGVPKE---RMAMVGDRLYTDVKLGKNA-----GIVSILVLTGETTPEDLERAETKPDFVFK  261 (271)
T ss_dssp             EEC-STTSTHHHHHHHHHHTCCGG---GEEEEESCHHHHHHHHHHH-----TCEEEEESSSSCCHHHHHHCSSCCSEEES
T ss_pred             ccC-CCCCHHHHHHHHHHhCCCCc---eEEEECCCcHHHHHHHHHc-----CCeEEEECCCCCCHHHHhhcCCCCCEEEC
Confidence            567 88999999999999999988   99999999 6999999999     776544 433211        25889999


Q ss_pred             ChhHHHHHH
Q 040896          267 DPDEVMSFL  275 (288)
Q Consensus       267 ~~~~v~~~l  275 (288)
                      +..++.++|
T Consensus       262 ~l~el~~~l  270 (271)
T 1vjr_A          262 NLGELAKAV  270 (271)
T ss_dssp             SHHHHHHHH
T ss_pred             CHHHHHHHh
Confidence            988887765

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.54  E-value=2.9e-14  Score=122.31  Aligned_cols=74  Identities=16%  Similarity=0.144  Sum_probs=59.8

Q ss_pred             EEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCceEEEE-ecC--CCC------ccceEE
Q 040896          195 EIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGYPIIV-SSV--PRE------TKALYS  264 (288)
Q Consensus       195 eI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~~v~v-~na--~~~------~~A~~~  264 (288)
                      |+.+. +.+|+.+++.+++++|++++   ++++|||+. ||++|++.+     |+++++ ..+  .+.      ..|+++
T Consensus       184 ~~~~~-~kpk~~~~~~~~~~lgi~~~---~~i~iGD~~~nDi~~a~~a-----G~~~~~v~~g~~~~~~~~~~~~~~~~~  254 (271)
T 2x4d_A          184 KAEVV-GKPSPEFFKSALQAIGVEAH---QAVMIGDDIVGDVGGAQRC-----GMRALQVRTGKFRPSDEHHPEVKADGY  254 (271)
T ss_dssp             CCEEE-STTCHHHHHHHHHHHTCCGG---GEEEEESCTTTTHHHHHHT-----TCEEEEESSTTCCGGGGGCSSCCCSEE
T ss_pred             ceeec-cCCCHHHHHHHHHHhCCCcc---eEEEECCCcHHHHHHHHHC-----CCcEEEEcCCCCCchhhcccCCCCCEE
Confidence            55667 88999999999999999987   999999998 999999999     776554 333  111      248899


Q ss_pred             eCChhHHHHHHHH
Q 040896          265 LRDPDEVMSFLRR  277 (288)
Q Consensus       265 ~~~~~~v~~~l~~  277 (288)
                      +.+..++.++|.+
T Consensus       255 ~~~~~el~~~l~~  267 (271)
T 2x4d_A          255 VDNLAEAVDLLLQ  267 (271)
T ss_dssp             ESSHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHh
Confidence            9999888877754

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.49  E-value=4.3e-15  Score=125.57  Aligned_cols=69  Identities=13%  Similarity=0.060  Sum_probs=55.6

Q ss_pred             EEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCC-cccHHHHHHHHhcCCceEEE---EecCCCC------ccceE
Q 040896          194 MEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDD-KTDEDAFKVIRHMGRGYPII---VSSVPRE------TKALY  263 (288)
Q Consensus       194 ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs-~ND~~Ml~~~~~~~~g~~v~---v~na~~~------~~A~~  263 (288)
                      .|+.+. +.+|+.+++.+++++|++++   ++++|||+ .||++|++.+     |++++   +|+...+      ..|++
T Consensus       169 ~~~~~~-~kpk~~~~~~~~~~lgi~~~---~~i~iGD~~~nDi~~~~~a-----G~~~~~v~~g~~~~~~~~~~~~~~~~  239 (250)
T 2c4n_A          169 RKPFYV-GKPSPWIIRAALNKMQAHSE---ETVIVGDNLRTDILAGFQA-----GLETILVLSGVSSLDDIDSMPFRPSW  239 (250)
T ss_dssp             CCCEEC-STTSTHHHHHHHHHHTCCGG---GEEEEESCTTTHHHHHHHT-----TCEEEEESSSSCCGGGGSSCSSCCSE
T ss_pred             CCceEe-CCCCHHHHHHHHHHcCCCcc---eEEEECCCchhHHHHHHHc-----CCeEEEECCCCCChhhhhhcCCCCCE
Confidence            356677 89999999999999999987   99999999 7999999999     77633   3444321      36889


Q ss_pred             EeCChhHH
Q 040896          264 SLRDPDEV  271 (288)
Q Consensus       264 ~~~~~~~v  271 (288)
                      ++++..++
T Consensus       240 v~~~~~el  247 (250)
T 2c4n_A          240 IYPSVAEI  247 (250)
T ss_dssp             EESSGGGC
T ss_pred             EECCHHHh
Confidence            98886654

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.48  E-value=1.6e-13  Score=118.49  Aligned_cols=67  Identities=13%  Similarity=0.137  Sum_probs=53.3

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEc---CCChhhHhhhc---CCC--CeEEEccCcee
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVS---GRCLDKVSRFV---QLK--NVVYAGSHGMD   90 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~T---GR~~~~l~~~~---~~~--~~~~i~~nGa~   90 (288)
                      ..|+|+||+||||++     ++..+ +.++++|+++++.+ +|+++|   ||+...+.+.+   +++  ...++++||+.
T Consensus         4 ~~kli~~DlDGTLl~-----~~~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~~   77 (264)
T 3epr_A            4 AYKGYLIDLDGTIYK-----GKSRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMAT   77 (264)
T ss_dssp             CCCEEEECCBTTTEE-----TTEEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHH
T ss_pred             CCCEEEEeCCCceEe-----CCEEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHHH
Confidence            368999999999999     56677 89999999999995 999999   88888877764   432  23477777775


Q ss_pred             Ee
Q 040896           91 IS   92 (288)
Q Consensus        91 i~   92 (288)
                      +.
T Consensus        78 ~~   79 (264)
T 3epr_A           78 VD   79 (264)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.44  E-value=1.8e-13  Score=109.25  Aligned_cols=71  Identities=20%  Similarity=0.349  Sum_probs=58.5

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHH-HHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVM-SFLRR  277 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~-~~l~~  277 (288)
                      .|..+++.+++.++++++   +++++||+.||++|.+.+     |+++++.|+.+.  ..|++++.+  .+++. ++++.
T Consensus        84 p~~~~~~~~~~~~~~~~~---~~~~vGD~~~Di~~a~~a-----g~~~~~~~~~~~~~~~a~~v~~~~~~~g~~~~~~~~  155 (162)
T 2p9j_A           84 KKLEIYEKIKEKYSLKDE---EIGFIGDDVVDIEVMKKV-----GFPVAVRNAVEEVRKVAVYITQRNGGEGALREVAEL  155 (162)
T ss_dssp             -CHHHHHHHHHHTTCCGG---GEEEEECSGGGHHHHHHS-----SEEEECTTSCHHHHHHCSEECSSCSSSSHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEEecCccHHHHhhCCEEecCCCCCcHHHHHHHH
Confidence            688999999999999877   999999999999999998     899999887543  479999876  34555 77887


Q ss_pred             HHHH
Q 040896          278 LARW  281 (288)
Q Consensus       278 ~~~~  281 (288)
                      +++.
T Consensus       156 ~~~~  159 (162)
T 2p9j_A          156 IHFL  159 (162)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            7764

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.42  E-value=6e-13  Score=109.30  Aligned_cols=74  Identities=20%  Similarity=0.192  Sum_probs=62.8

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHH-HHHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVM-SFLR  276 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~-~~l~  276 (288)
                      ..|..+++.+++.+|++++   ++++|||+.||++|++.+     |++++++|+.+.  ..|++++.+  .+++. ++++
T Consensus       100 kpk~~~~~~~~~~~g~~~~---~~~~iGD~~~Di~~a~~a-----g~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~  171 (188)
T 2r8e_A          100 SNKLIAFSDLLEKLAIAPE---NVAYVGDDLIDWPVMEKV-----GLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD  171 (188)
T ss_dssp             SCSHHHHHHHHHHHTCCGG---GEEEEESSGGGHHHHTTS-----SEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence            4789999999999999877   999999999999999998     899999987653  579999875  45666 8888


Q ss_pred             HHHHHhh
Q 040896          277 RLARWKK  283 (288)
Q Consensus       277 ~~~~~~~  283 (288)
                      .++..+.
T Consensus       172 ~ll~~~~  178 (188)
T 2r8e_A          172 LLLLAQG  178 (188)
T ss_dssp             HHHHHTT
T ss_pred             HHHHhcC
Confidence            8877664

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.41  E-value=2.3e-13  Score=110.68  Aligned_cols=71  Identities=23%  Similarity=0.266  Sum_probs=59.7

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRR  277 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~  277 (288)
                      .+|+.+++.+++.++++++   ++++|||+.||++|++.+     |++++|+|+.+.  ..|++++.+  .+|+.+.+.+
T Consensus        85 ~~k~~~l~~~~~~~~~~~~---~~~~vGD~~nD~~~~~~a-----g~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~  156 (176)
T 3mmz_A           85 DRKDLALKQWCEEQGIAPE---RVLYVGNDVNDLPCFALV-----GWPVAVASAHDVVRGAARAVTTVPGGDGAIREIAS  156 (176)
T ss_dssp             SCHHHHHHHHHHHHTCCGG---GEEEEECSGGGHHHHHHS-----SEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred             CChHHHHHHHHHHcCCCHH---HEEEEcCCHHHHHHHHHC-----CCeEECCChhHHHHHhCCEEecCCCCCcHHHHHHH
Confidence            4899999999999999887   999999999999999999     899999998653  578998864  5566666655


Q ss_pred             HHH
Q 040896          278 LAR  280 (288)
Q Consensus       278 ~~~  280 (288)
                      ++.
T Consensus       157 ~l~  159 (176)
T 3mmz_A          157 WIL  159 (176)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.40  E-value=7.5e-13  Score=109.53  Aligned_cols=73  Identities=16%  Similarity=0.136  Sum_probs=61.4

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHH-HHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEV-MSFLRR  277 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v-~~~l~~  277 (288)
                      +|+.+++.+++.++++++   ++++|||+.||++|++.+     |++++|+|+.+.  ..|++++.+  .+|+ .++++.
T Consensus       100 ~k~~~~~~~~~~~~~~~~---~~~~vGD~~nDi~~~~~a-----g~~va~~na~~~~~~~ad~v~~~~~~~G~~~~~~~~  171 (195)
T 3n07_A          100 DKVQAYYDICQKLAIAPE---QTGYIGDDLIDWPVMEKV-----ALRVCVADGHPLLAQRANYVTHIKGGHGAVREVCDL  171 (195)
T ss_dssp             SHHHHHHHHHHHHCCCGG---GEEEEESSGGGHHHHTTS-----SEEEECTTSCHHHHHHCSEECSSCTTTTHHHHHHHH
T ss_pred             CcHHHHHHHHHHhCCCHH---HEEEEcCCHHHHHHHHHC-----CCEEEECChHHHHHHhCCEEEcCCCCCCHHHHHHHH
Confidence            799999999999999987   999999999999999999     899999999764  589999864  5564 556666


Q ss_pred             HHHHhh
Q 040896          278 LARWKK  283 (288)
Q Consensus       278 ~~~~~~  283 (288)
                      ++..+.
T Consensus       172 il~~~~  177 (195)
T 3n07_A          172 ILQARN  177 (195)
T ss_dssp             HHHHTT
T ss_pred             HHHhcc
Confidence            665543

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.39  E-value=1.3e-12  Score=107.64  Aligned_cols=70  Identities=27%  Similarity=0.287  Sum_probs=58.5

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRL  278 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~  278 (288)
                      +|+.+++.+++.++++++   ++++|||+.||++|++.+     |++++|+|+.+.  ..|++++.+  .+|+.+.+.++
T Consensus        94 pk~~~~~~~~~~~~~~~~---~~~~vGD~~~Di~~~~~a-----g~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~  165 (191)
T 3n1u_A           94 DKRSAYQHLKKTLGLNDD---EFAYIGDDLPDLPLIQQV-----GLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDL  165 (191)
T ss_dssp             SCHHHHHHHHHHHTCCGG---GEEEEECSGGGHHHHHHS-----SEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHHC-----CCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHH
Confidence            789999999999999887   999999999999999999     899999998653  579999875  55655555554


Q ss_pred             HH
Q 040896          279 AR  280 (288)
Q Consensus       279 ~~  280 (288)
                      +.
T Consensus       166 ll  167 (191)
T 3n1u_A          166 IL  167 (191)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.37  E-value=1.1e-12  Score=107.90  Aligned_cols=71  Identities=21%  Similarity=0.231  Sum_probs=57.5

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHH-HHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMS-FLR  276 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~-~l~  276 (288)
                      .+|..+++.+++.+|++++   ++++|||+.||++|++.+     |++++|+|+.+.  ..|++++.+  .+|+.+ +++
T Consensus        93 ~~K~~~~~~~~~~~g~~~~---~~~~vGD~~nDi~~~~~a-----g~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~  164 (189)
T 3mn1_A           93 EDKLVVLDKLLAELQLGYE---QVAYLGDDLPDLPVIRRV-----GLGMAVANAASFVREHAHGITRAQGGEGAAREFCE  164 (189)
T ss_dssp             SCHHHHHHHHHHHHTCCGG---GEEEEECSGGGHHHHHHS-----SEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHH
T ss_pred             CChHHHHHHHHHHcCCChh---HEEEECCCHHHHHHHHHC-----CCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHH
Confidence            3899999999999999887   999999999999999999     899999998653  579999875  345433 344


Q ss_pred             HHHH
Q 040896          277 RLAR  280 (288)
Q Consensus       277 ~~~~  280 (288)
                      .+..
T Consensus       165 ~l~~  168 (189)
T 3mn1_A          165 LILS  168 (189)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            3433

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.37  E-value=7.2e-13  Score=106.00  Aligned_cols=69  Identities=28%  Similarity=0.343  Sum_probs=59.9

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhH-HHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDE-VMSFLRR  277 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~-v~~~l~~  277 (288)
                      .|..+++.++++++++++   ++++|||+.||++|++.+     |++++++|+.+.  ..|++++.+  .++ +.++++.
T Consensus        79 pk~~~~~~~~~~~~~~~~---~~~~vGD~~~Di~~~~~a-----g~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~~  150 (164)
T 3e8m_A           79 DKLSAAEELCNELGINLE---QVAYIGDDLNDAKLLKRV-----GIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVEK  150 (164)
T ss_dssp             CHHHHHHHHHHHHTCCGG---GEEEECCSGGGHHHHTTS-----SEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHHHH
Confidence            799999999999999887   999999999999999998     899999988653  578998865  345 8888887


Q ss_pred             HH
Q 040896          278 LA  279 (288)
Q Consensus       278 ~~  279 (288)
                      ++
T Consensus       151 ll  152 (164)
T 3e8m_A          151 VL  152 (164)
T ss_dssp             HT
T ss_pred             HH
Confidence            76

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.35  E-value=4.1e-12  Score=112.00  Aligned_cols=70  Identities=16%  Similarity=0.144  Sum_probs=54.0

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCceE-EEEecCCC--------------Cccc
Q 040896          198 PCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGYP-IIVSSVPR--------------ETKA  261 (288)
Q Consensus       198 ~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~~-v~v~na~~--------------~~~A  261 (288)
                      .. +..|+.+++.+++.+|++++   ++++|||+. ||+.|.+.+     |+. +.+..+..              ...+
T Consensus       212 ~~-~KP~~~~~~~~~~~lgi~~~---e~l~vGD~~~~Di~~a~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~~~~p  282 (306)
T 2oyc_A          212 VV-GKPSPYMFECITENFSIDPA---RTLMVGDRLETDILFGHRC-----GMTTVLTLTGVSRLEEAQAYLAAGQHDLVP  282 (306)
T ss_dssp             EC-STTSTHHHHHHHHHSCCCGG---GEEEEESCTTTHHHHHHHH-----TCEEEEESSSSCCHHHHHHHHHTTCGGGSC
T ss_pred             ee-CCCCHHHHHHHHHHcCCChH---HEEEECCCchHHHHHHHHC-----CCeEEEECCCCCCHHHHHhhhcccccCCCC
Confidence            45 67889999999999999987   999999995 999999999     765 44443321              1257


Q ss_pred             eEEeCChhHHHHHHH
Q 040896          262 LYSLRDPDEVMSFLR  276 (288)
Q Consensus       262 ~~~~~~~~~v~~~l~  276 (288)
                      ++++++..++.++|+
T Consensus       283 d~vi~~l~el~~~l~  297 (306)
T 2oyc_A          283 HYYVESIADLTEGLE  297 (306)
T ss_dssp             SEEESSGGGGGGGC-
T ss_pred             CEEECCHHHHHHHHH
Confidence            888888887766553

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.33  E-value=2.9e-14  Score=118.51  Aligned_cols=74  Identities=15%  Similarity=0.121  Sum_probs=55.1

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEE----ecCCCC--c-cceEEeCChhH
Q 040896          198 PCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV----SSVPRE--T-KALYSLRDPDE  270 (288)
Q Consensus       198 ~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v----~na~~~--~-~A~~~~~~~~~  270 (288)
                      +. +..|+.+++.+++++|++++   ++++|||+.||++|++.+     |+++++    +|+.+.  . .|++++.+.++
T Consensus       142 ~~-~k~~~~~~~~~~~~~~~~~~---~~i~iGD~~nDi~~~~~a-----G~~~~~~~~~~~~~~~l~~~~ad~v~~~~~e  212 (225)
T 3d6j_A          142 TH-HKPDPEGLLLAIDRLKACPE---EVLYIGDSTVDAGTAAAA-----GVSFTGVTSGMTTAQEFQAYPYDRIISTLGQ  212 (225)
T ss_dssp             SS-CTTSTHHHHHHHHHTTCCGG---GEEEEESSHHHHHHHHHH-----TCEEEEETTSSCCTTGGGGSCCSEEESSGGG
T ss_pred             CC-CCCChHHHHHHHHHhCCChH---HeEEEcCCHHHHHHHHHC-----CCeEEEECCCCCChHHHhhcCCCEEECCHHH
Confidence            45 66788999999999999987   999999999999999999     887665    343332  2 38999999999


Q ss_pred             HHHHHHHHHH
Q 040896          271 VMSFLRRLAR  280 (288)
Q Consensus       271 v~~~l~~~~~  280 (288)
                      +.++|+.+.+
T Consensus       213 l~~~l~~~~~  222 (225)
T 3d6j_A          213 LISVPEDKSG  222 (225)
T ss_dssp             GC--------
T ss_pred             HHHhhhhhcC
Confidence            9998887764

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.30  E-value=1.1e-13  Score=115.63  Aligned_cols=79  Identities=14%  Similarity=0.109  Sum_probs=64.0

Q ss_pred             EEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce---EEEEecCCC----CccceEEeCC
Q 040896          195 EIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY---PIIVSSVPR----ETKALYSLRD  267 (288)
Q Consensus       195 eI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~---~v~v~na~~----~~~A~~~~~~  267 (288)
                      +..+. +..|+.+++.+++++|++++   ++++|||+.||++|++.+     |+   +|+++++..    +..|++++.+
T Consensus       136 ~~~~~-~kp~~~~~~~~~~~lgi~~~---~~i~iGD~~~Di~~a~~a-----G~~~i~v~~g~~~~~~~~~~~ad~v~~s  206 (226)
T 3mc1_A          136 SLDGK-LSTKEDVIRYAMESLNIKSD---DAIMIGDREYDVIGALKN-----NLPSIGVTYGFGSYEELKNAGANYIVNS  206 (226)
T ss_dssp             CTTSS-SCSHHHHHHHHHHHHTCCGG---GEEEEESSHHHHHHHHTT-----TCCEEEESSSSSCHHHHHHHTCSEEESS
T ss_pred             CCCCC-CCCCHHHHHHHHHHhCcCcc---cEEEECCCHHHHHHHHHC-----CCCEEEEccCCCCHHHHHHcCCCEEECC
Confidence            44567 78999999999999999987   999999999999999999     76   666676653    2579999999


Q ss_pred             hhHHHHHHHHHHHHh
Q 040896          268 PDEVMSFLRRLARWK  282 (288)
Q Consensus       268 ~~~v~~~l~~~~~~~  282 (288)
                      .+++.++|+..-+.+
T Consensus       207 ~~el~~~~~~~~~~~  221 (226)
T 3mc1_A          207 VDELHKKILELREGH  221 (226)
T ss_dssp             HHHHHHHHHTC----
T ss_pred             HHHHHHHHHHHhccc
Confidence            999999887655444

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.24  E-value=5.3e-11  Score=101.49  Aligned_cols=69  Identities=16%  Similarity=0.134  Sum_probs=56.1

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCce-EEEEecCC--C------CccceEEeCChhH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGY-PIIVSSVP--R------ETKALYSLRDPDE  270 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~-~v~v~na~--~------~~~A~~~~~~~~~  270 (288)
                      +..|..+++.+++++|++++   ++++|||+. ||+.|.+.+     |+ ++.+..+.  .      ...+++++++..+
T Consensus       178 ~Kp~~~~~~~~~~~lgi~~~---~~~~iGD~~~~Di~~a~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~  249 (259)
T 2ho4_A          178 GKPEKTFFLEALRDADCAPE---EAVMIGDDCRDDVDGAQNI-----GMLGILVKTGKYKAADEEKINPPPYLTCESFPH  249 (259)
T ss_dssp             STTSHHHHHHHGGGGTCCGG---GEEEEESCTTTTHHHHHHT-----TCEEEEESSTTCCTTGGGGSSSCCSEEESCHHH
T ss_pred             cCCCHHHHHHHHHHcCCChH---HEEEECCCcHHHHHHHHHC-----CCcEEEECCCCCCcccccccCCCCCEEECCHHH
Confidence            56899999999999999987   999999998 999999999     64 56665541  1      2357889999998


Q ss_pred             HHHHHHH
Q 040896          271 VMSFLRR  277 (288)
Q Consensus       271 v~~~l~~  277 (288)
                      +.++|.+
T Consensus       250 l~~~l~~  256 (259)
T 2ho4_A          250 AVDHILQ  256 (259)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8877653

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.22  E-value=5.3e-13  Score=110.88  Aligned_cols=64  Identities=14%  Similarity=-0.015  Sum_probs=54.8

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEE----ecCCC--CccceEEeCChhHHHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV----SSVPR--ETKALYSLRDPDEVMS  273 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v----~na~~--~~~A~~~~~~~~~v~~  273 (288)
                      ..|+.+++.+++++|++++   ++++|||+.||++|++.+     |+++++    +|+.+  +..|++++.+.+++..
T Consensus       150 kp~~~~~~~~~~~~~i~~~---~~i~iGD~~nDi~~a~~a-----G~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~  219 (226)
T 1te2_A          150 KPHPQVYLDCAAKLGVDPL---TCVALEDSVNGMIASKAA-----RMRSIVVPAPEAQNDPRFVLANVKLSSLTELTA  219 (226)
T ss_dssp             TTSTHHHHHHHHHHTSCGG---GEEEEESSHHHHHHHHHT-----TCEEEECCCTTTTTCGGGGGSSEECSCGGGCCH
T ss_pred             CCChHHHHHHHHHcCCCHH---HeEEEeCCHHHHHHHHHc-----CCEEEEEcCCCCcccccccccCeEECCHHHHhH
Confidence            3459999999999999987   999999999999999999     899888    66654  4679999998877544

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.19  E-value=1.8e-12  Score=108.38  Aligned_cols=70  Identities=13%  Similarity=0.166  Sum_probs=58.8

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCceEEEE---ecCCCC--ccceEEeCChhHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGYPIIV---SSVPRE--TKALYSLRDPDEVMSF  274 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~~v~v---~na~~~--~~A~~~~~~~~~v~~~  274 (288)
                      .-.|..+++.+++++|++++   ++++|||+. ||++|++.+     |+++++   +++..+  ..|++++++.+++..+
T Consensus       157 ~kp~~~~~~~~~~~lgi~~~---~~~~iGD~~~nDi~~a~~a-----G~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~  228 (235)
T 2om6_A          157 YKPRKEMFEKVLNSFEVKPE---ESLHIGDTYAEDYQGARKV-----GMWAVWINQEGDKVRKLEERGFEIPSIANLKDV  228 (235)
T ss_dssp             CTTCHHHHHHHHHHTTCCGG---GEEEEESCTTTTHHHHHHT-----TSEEEEECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCcc---ceEEECCChHHHHHHHHHC-----CCEEEEECCCCCCcccCCCCcchHhhHHHHHHH
Confidence            44678999999999999987   999999999 999999999     899888   433322  3588999999999888


Q ss_pred             HHHH
Q 040896          275 LRRL  278 (288)
Q Consensus       275 l~~~  278 (288)
                      |+++
T Consensus       229 l~~~  232 (235)
T 2om6_A          229 IELI  232 (235)
T ss_dssp             HHHT
T ss_pred             HHHH
Confidence            8765

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.18  E-value=2.1e-11  Score=102.40  Aligned_cols=72  Identities=10%  Similarity=-0.002  Sum_probs=61.2

Q ss_pred             eCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce---EEEEecCCCC----ccceEEeCChh
Q 040896          197 RPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY---PIIVSSVPRE----TKALYSLRDPD  269 (288)
Q Consensus       197 ~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~---~v~v~na~~~----~~A~~~~~~~~  269 (288)
                      .+. +..|+.+++.+++++|++++   ++++|||+.||++|++.+     |+   +|++++...+    ..|++++.+.+
T Consensus       156 ~~~-~kp~~~~~~~~~~~lg~~~~---~~i~vGD~~~Di~~a~~a-----G~~~i~v~~g~~~~~~~~~~~ad~v~~~~~  226 (237)
T 4ex6_A          156 VER-GKPHPDMALHVARGLGIPPE---RCVVIGDGVPDAEMGRAA-----GMTVIGVSYGVSGPDELMRAGADTVVDSFP  226 (237)
T ss_dssp             SSS-CTTSSHHHHHHHHHHTCCGG---GEEEEESSHHHHHHHHHT-----TCEEEEESSSSSCHHHHHHTTCSEEESSHH
T ss_pred             CCC-CCCCHHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHC-----CCeEEEEecCCCCHHHHHhcCCCEEECCHH
Confidence            466 78999999999999999987   999999999999999999     77   6666655421    37999999999


Q ss_pred             HHHHHHHH
Q 040896          270 EVMSFLRR  277 (288)
Q Consensus       270 ~v~~~l~~  277 (288)
                      ++.++|++
T Consensus       227 el~~~l~~  234 (237)
T 4ex6_A          227 AAVTAVLD  234 (237)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHc
Confidence            99888864

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.15  E-value=2.7e-11  Score=101.50  Aligned_cols=74  Identities=18%  Similarity=0.196  Sum_probs=58.5

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCCCccceEEeCChhHHHHHHH
Q 040896          198 PCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPRETKALYSLRDPDEVMSFLR  276 (288)
Q Consensus       198 ~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~~~~A~~~~~~~~~v~~~l~  276 (288)
                      .. +..|..+++.+++++|++++  +++++|||+.||+.|.+.+     |+ ++.|+++.. ..+++++.+..++.++|+
T Consensus       156 ~~-~Kp~~~~~~~~~~~lgi~~~--~~~v~vGD~~~Di~~a~~a-----G~~~v~~~~~~~-~~~~~~~~~~~el~~~l~  226 (231)
T 3kzx_A          156 GT-IKPSPEPVLAALTNINIEPS--KEVFFIGDSISDIQSAIEA-----GCLPIKYGSTNI-IKDILSFKNFYDIRNFIC  226 (231)
T ss_dssp             SC-CTTSSHHHHHHHHHHTCCCS--TTEEEEESSHHHHHHHHHT-----TCEEEEECC------CCEEESSHHHHHHHHH
T ss_pred             CC-CCCChHHHHHHHHHcCCCcc--cCEEEEcCCHHHHHHHHHC-----CCeEEEECCCCC-CCCceeeCCHHHHHHHHH
Confidence            44 56778999999999999752  1699999999999999999     74 788876644 466778999999999998


Q ss_pred             HHHH
Q 040896          277 RLAR  280 (288)
Q Consensus       277 ~~~~  280 (288)
                      ++++
T Consensus       227 ~~l~  230 (231)
T 3kzx_A          227 QLIN  230 (231)
T ss_dssp             HHHC
T ss_pred             HHhc
Confidence            8864

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.14  E-value=8.4e-12  Score=104.44  Aligned_cols=71  Identities=24%  Similarity=0.309  Sum_probs=59.4

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCce---EEEEecCCCC--ccceEEeCChhHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGY---PIIVSSVPRE--TKALYSLRDPDEVMSF  274 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~---~v~v~na~~~--~~A~~~~~~~~~v~~~  274 (288)
                      +..|+.+++.+++++|++++   ++++|||+. ||++|.+.+     |+   .|.++|+.++  ..|++++++.+++.++
T Consensus       154 ~kp~~~~~~~~~~~~~~~~~---~~~~vGD~~~~Di~~a~~a-----G~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~  225 (234)
T 3u26_A          154 FKPHPRIFELALKKAGVKGE---EAVYVGDNPVKDCGGSKNL-----GMTSILLDRKGEKREFWDKCDFIVSDLREVIKI  225 (234)
T ss_dssp             CTTSHHHHHHHHHHHTCCGG---GEEEEESCTTTTHHHHHTT-----TCEEEEECSSSTTGGGGGGCSEEESSTHHHHHH
T ss_pred             CCcCHHHHHHHHHHcCCCch---hEEEEcCCcHHHHHHHHHc-----CCEEEEECCCCCccccccCCCEeeCCHHHHHHH
Confidence            55778899999999999987   999999997 999999999     74   4555665443  4899999999999999


Q ss_pred             HHHHH
Q 040896          275 LRRLA  279 (288)
Q Consensus       275 l~~~~  279 (288)
                      |+++.
T Consensus       226 l~~~~  230 (234)
T 3u26_A          226 VDELN  230 (234)
T ss_dssp             HHHHC
T ss_pred             HHHHh
Confidence            98764

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.14  E-value=3.4e-10  Score=101.04  Aligned_cols=73  Identities=18%  Similarity=0.164  Sum_probs=63.7

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeC--ChhHHHHHHHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLR--DPDEVMSFLRR  277 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~~~~v~~~l~~  277 (288)
                      ..|+.+++.+++.+|++++   ++++|||+.||++|++.+     |++++| |+.+  +..|++++.  +.+++..+|+.
T Consensus       244 kpk~~~~~~~~~~lgi~~~---~~v~vGDs~nDi~~a~~a-----G~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~  314 (335)
T 3n28_A          244 QTKADILLTLAQQYDVEIH---NTVAVGDGANDLVMMAAA-----GLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSA  314 (335)
T ss_dssp             HHHHHHHHHHHHHHTCCGG---GEEEEECSGGGHHHHHHS-----SEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHcCCChh---hEEEEeCCHHHHHHHHHC-----CCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHh
Confidence            4799999999999999987   999999999999999999     899999 8765  357888875  57899999998


Q ss_pred             HHHHhh
Q 040896          278 LARWKK  283 (288)
Q Consensus       278 ~~~~~~  283 (288)
                      .+..++
T Consensus       315 ~l~~~~  320 (335)
T 3n28_A          315 ALVAQQ  320 (335)
T ss_dssp             HHHHTT
T ss_pred             HHHHhh
Confidence            876654

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.12  E-value=8.6e-11  Score=94.75  Aligned_cols=74  Identities=15%  Similarity=0.214  Sum_probs=63.2

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCC--hhH-HHHHHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRD--PDE-VMSFLR  276 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~--~~~-v~~~l~  276 (288)
                      .+|+.+++.++++++++++   ++++|||+.||++|++.+     |++++|+|+.+  +..|++++.+  .+| +.++++
T Consensus        82 ~~K~~~l~~~~~~~gi~~~---~~~~vGD~~nDi~~~~~a-----g~~~a~~na~~~~k~~Ad~v~~~~~~~G~~~~~~~  153 (168)
T 3ewi_A           82 SDKLATVDEWRKEMGLCWK---EVAYLGNEVSDEECLKRV-----GLSAVPADACSGAQKAVGYICKCSGGRGAIREFAE  153 (168)
T ss_dssp             SCHHHHHHHHHHHTTCCGG---GEEEECCSGGGHHHHHHS-----SEEEECTTCCHHHHTTCSEECSSCTTTTHHHHHHH
T ss_pred             CChHHHHHHHHHHcCcChH---HEEEEeCCHhHHHHHHHC-----CCEEEeCChhHHHHHhCCEEeCCCCCccHHHHHHH
Confidence            4899999999999999987   999999999999999999     89999999976  4789999874  556 556777


Q ss_pred             HHHHHhh
Q 040896          277 RLARWKK  283 (288)
Q Consensus       277 ~~~~~~~  283 (288)
                      .++..+.
T Consensus       154 ~il~~~~  160 (168)
T 3ewi_A          154 HIFLLIE  160 (168)
T ss_dssp             HHHHHHH
T ss_pred             HHHHhhh
Confidence            7766543

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.10  E-value=2.8e-12  Score=107.36  Aligned_cols=70  Identities=20%  Similarity=0.143  Sum_probs=56.4

Q ss_pred             CHHHHHHHHHHhcC--CCCCCCceeEEEcCCcccHHHHHHHHhcCCceE-EEEecCC--CC----ccceEEeCChhHHHH
Q 040896          203 DKGRALEYLLDTFG--FNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYP-IIVSSVP--RE----TKALYSLRDPDEVMS  273 (288)
Q Consensus       203 sKg~al~~l~~~~~--~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~-v~v~na~--~~----~~A~~~~~~~~~v~~  273 (288)
                      .+..+++.+++++|  ++++   ++++|||+.||++|.+.+     |+. +.|.++.  .+    ..|++++.+.+++.+
T Consensus       152 ~~~~~~~~~~~~lg~~~~~~---~~i~iGD~~~Di~~a~~a-----G~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~  223 (234)
T 2hcf_A          152 LPHIALERARRMTGANYSPS---QIVIIGDTEHDIRCAREL-----DARSIAVATGNFTMEELARHKPGTLFKNFAETDE  223 (234)
T ss_dssp             HHHHHHHHHHHHHCCCCCGG---GEEEEESSHHHHHHHHTT-----TCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHH
T ss_pred             hHHHHHHHHHHHhCCCCCcc---cEEEECCCHHHHHHHHHC-----CCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHH
Confidence            45678899999999  8877   999999999999999999     754 5555542  22    238999999999999


Q ss_pred             HHHHHHH
Q 040896          274 FLRRLAR  280 (288)
Q Consensus       274 ~l~~~~~  280 (288)
                      +|+++..
T Consensus       224 ~l~~~~~  230 (234)
T 2hcf_A          224 VLASILT  230 (234)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhc
Confidence            9988764

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.09  E-value=2e-11  Score=105.89  Aligned_cols=70  Identities=14%  Similarity=0.142  Sum_probs=60.0

Q ss_pred             CCCHHHHHHHHHHhcCCCC-CCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--------CccceEEeCChhHH
Q 040896          201 DWDKGRALEYLLDTFGFNN-ASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--------ETKALYSLRDPDEV  271 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~-~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--------~~~A~~~~~~~~~v  271 (288)
                      +..|+.+++.+++++|+++ +   ++++|||+.||+.|.+.+     |++.+|+++..        ...|++++++..++
T Consensus       203 ~Kp~~~~~~~~~~~lgi~~~~---~~i~vGD~~~Di~~a~~a-----G~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el  274 (282)
T 3nuq_A          203 CKPHVKAFEKAMKESGLARYE---NAYFIDDSGKNIETGIKL-----GMKTCIHLVENEVNEILGQTPEGAIVISDILEL  274 (282)
T ss_dssp             CTTSHHHHHHHHHHHTCCCGG---GEEEEESCHHHHHHHHHH-----TCSEEEEECSCCC----CCCCTTCEEESSGGGG
T ss_pred             CCcCHHHHHHHHHHcCCCCcc---cEEEEcCCHHHHHHHHHC-----CCeEEEEEcCCccccccccCCCCCEEeCCHHHH
Confidence            5689999999999999997 8   999999999999999999     88777877743        23788999999888


Q ss_pred             HHHHHHH
Q 040896          272 MSFLRRL  278 (288)
Q Consensus       272 ~~~l~~~  278 (288)
                      .++|.++
T Consensus       275 ~~~l~~l  281 (282)
T 3nuq_A          275 PHVVSDL  281 (282)
T ss_dssp             GGTSGGG
T ss_pred             HHHhhhh
Confidence            8776554

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.06  E-value=1.8e-09  Score=87.15  Aligned_cols=66  Identities=17%  Similarity=0.093  Sum_probs=53.1

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCC--C------CccceEEeCChhHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVP--R------ETKALYSLRDPDEVMS  273 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~--~------~~~A~~~~~~~~~v~~  273 (288)
                      -+...++.+++++|++++   ++++|||+.||+.|.+.+     |+ ++.+..+.  .      ...|++++++..++.+
T Consensus       102 P~~~~~~~~~~~~~~~~~---~~~~vGD~~~Di~~a~~a-----G~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~  173 (179)
T 3l8h_A          102 PLPGMYRDIARRYDVDLA---GVPAVGDSLRDLQAAAQA-----GCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAE  173 (179)
T ss_dssp             TSSHHHHHHHHHHTCCCT---TCEEEESSHHHHHHHHHH-----TCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHH
Confidence            456788999999999988   999999999999999999     54 45555442  1      2468999999999888


Q ss_pred             HHH
Q 040896          274 FLR  276 (288)
Q Consensus       274 ~l~  276 (288)
                      +|.
T Consensus       174 ~l~  176 (179)
T 3l8h_A          174 QLL  176 (179)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            774

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.04  E-value=4.3e-10  Score=96.50  Aligned_cols=66  Identities=14%  Similarity=0.091  Sum_probs=48.8

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh-------cCCC--CeEEEccCce
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF-------VQLK--NVVYAGSHGM   89 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~-------~~~~--~~~~i~~nGa   89 (288)
                      ..++|+||+||||++     +...+ +.+.++|+.+++.+ .++++|||+......+       ++++  ...+++.+|+
T Consensus         4 ~~k~v~fDlDGTL~~-----~~~~~-~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~   77 (264)
T 1yv9_A            4 DYQGYLIDLDGTIYL-----GKEPI-PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLA   77 (264)
T ss_dssp             SCCEEEECCBTTTEE-----TTEEC-HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHH
T ss_pred             cCCEEEEeCCCeEEe-----CCEEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcHHHH
Confidence            368999999999998     34445 78899999999885 8999999987554432       4442  2347777777


Q ss_pred             eE
Q 040896           90 DI   91 (288)
Q Consensus        90 ~i   91 (288)
                      .+
T Consensus        78 ~~   79 (264)
T 1yv9_A           78 TI   79 (264)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.01  E-value=4.4e-11  Score=99.89  Aligned_cols=72  Identities=11%  Similarity=0.065  Sum_probs=58.8

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCceEEEE-ecCC---C-CccceEEeCChhHH
Q 040896          198 PCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGYPIIV-SSVP---R-ETKALYSLRDPDEV  271 (288)
Q Consensus       198 ~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~~v~v-~na~---~-~~~A~~~~~~~~~v  271 (288)
                      +. +..|+.+++.+++++|++++   ++++|||+. ||+.|.+.+     |+.+++ ..+.   + +..+++++++..++
T Consensus       152 ~~-~kp~~~~~~~~~~~~~~~~~---~~~~vGD~~~~Di~~a~~a-----G~~~~~v~~~~~~~~~~~~~~~~~~~l~el  222 (230)
T 3vay_A          152 GI-GKPDPAPFLEALRRAKVDAS---AAVHVGDHPSDDIAGAQQA-----GMRAIWYNPQGKAWDADRLPDAEIHNLSQL  222 (230)
T ss_dssp             TC-CTTSHHHHHHHHHHHTCCGG---GEEEEESCTTTTHHHHHHT-----TCEEEEECTTCCCCCSSSCCSEEESSGGGH
T ss_pred             CC-CCcCHHHHHHHHHHhCCCch---heEEEeCChHHHHHHHHHC-----CCEEEEEcCCCCCCcccCCCCeeECCHHHH
Confidence            45 56789999999999999987   999999997 999999999     776555 3221   1 35789999999999


Q ss_pred             HHHHHHH
Q 040896          272 MSFLRRL  278 (288)
Q Consensus       272 ~~~l~~~  278 (288)
                      .++|+++
T Consensus       223 ~~~l~~~  229 (230)
T 3vay_A          223 PEVLARW  229 (230)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHhh
Confidence            9888753

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=98.93  E-value=1.1e-09  Score=85.32  Aligned_cols=67  Identities=15%  Similarity=0.045  Sum_probs=48.3

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCC---hhhHhhhc---CCCCeEEEccCce
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRC---LDKVSRFV---QLKNVVYAGSHGM   89 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~---~~~l~~~~---~~~~~~~i~~nGa   89 (288)
                      .++||+|+||||+++... ......+.++++|++|++.+ .|+|+|||+   +..+..++   +++ .+.|+.|+-
T Consensus         3 ~k~i~~DlDGTL~~~~~~-~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~-~~~I~~n~P   76 (142)
T 2obb_A            3 AMTIAVDFDGTIVEHRYP-RIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE-FYAANKDYP   76 (142)
T ss_dssp             CCEEEECCBTTTBCSCTT-SCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC-CSEESSSST
T ss_pred             CeEEEEECcCCCCCCCCc-cccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC-eEEEEcCCc
Confidence            579999999999984311 11234578999999999985 899999998   44555554   343 457777654

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=98.91  E-value=3.5e-09  Score=90.98  Aligned_cols=65  Identities=12%  Similarity=0.159  Sum_probs=49.4

Q ss_pred             EEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh------cCCC--CeEEEccCceeEe
Q 040896           22 IVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF------VQLK--NVVYAGSHGMDIS   92 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~------~~~~--~~~~i~~nGa~i~   92 (288)
                      |+++||+||||++     ....+ +.+.++|++|++.+ .|+++|||+......+      +|++  ...++++||+.+.
T Consensus         2 k~i~~D~DGtL~~-----~~~~~-~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~~~~~   75 (263)
T 1zjj_A            2 VAIIFDMDGVLYR-----GNRAI-PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATRL   75 (263)
T ss_dssp             EEEEEECBTTTEE-----TTEEC-TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHHH
T ss_pred             eEEEEeCcCceEe-----CCEeC-ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHHHHHH
Confidence            7899999999998     33344 78999999999885 9999999997544332      3543  2458888888654

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.88  E-value=7.5e-09  Score=100.20  Aligned_cols=134  Identities=17%  Similarity=0.264  Sum_probs=98.8

Q ss_pred             hcCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcCCCCeEEEccCceeEeCCC
Q 040896           17 AKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPA   95 (288)
Q Consensus        17 ~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~~~~~~~i~~nGa~i~~~~   95 (288)
                      .....+.+++..|++++..-.  -...+.+++.++|++|++.+ +++++|||+......+...                 
T Consensus       433 ~~~g~~~l~va~~~~~~G~i~--~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-----------------  493 (645)
T 3j08_A          433 EREAKTAVIVARNGRVEGIIA--VSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-----------------  493 (645)
T ss_dssp             HTTTCCCEEEEETTEEEEEEE--EECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-----------------
T ss_pred             HhcCCeEEEEEECCEEEEEEE--ecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-----------------
Confidence            455667888888999874211  12357889999999999995 8999999986665443210                 


Q ss_pred             CCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCCcccHHHHHHHH
Q 040896           96 GSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMV  175 (288)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l  175 (288)
                                                               +     ...                              
T Consensus       494 -----------------------------------------l-----gi~------------------------------  497 (645)
T 3j08_A          494 -----------------------------------------L-----NLD------------------------------  497 (645)
T ss_dssp             -----------------------------------------H-----TCS------------------------------
T ss_pred             -----------------------------------------c-----CCC------------------------------
Confidence                                                     0     000                              


Q ss_pred             HHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecC
Q 040896          176 NSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSV  255 (288)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na  255 (288)
                                     ..+.++.|.   +|+.+++.+.++     +   .++++||+.||.+||+.+     +.||+|+|+
T Consensus       498 ---------------~~~~~~~P~---~K~~~v~~l~~~-----~---~v~~vGDg~ND~~al~~A-----~vgiamg~g  546 (645)
T 3j08_A          498 ---------------LVIAEVLPH---QKSEEVKKLQAK-----E---VVAFVGDGINDAPALAQA-----DLGIAVGSG  546 (645)
T ss_dssp             ---------------EEECSCCTT---CHHHHHHHHTTT-----C---CEEEEECSSSCHHHHHHS-----SEEEEECCC
T ss_pred             ---------------EEEEeCCHH---hHHHHHHHHhhC-----C---eEEEEeCCHhHHHHHHhC-----CEEEEeCCC
Confidence                           112233355   899999998775     3   899999999999999999     899999998


Q ss_pred             CC--CccceEEe--CChhHHHHHHH
Q 040896          256 PR--ETKALYSL--RDPDEVMSFLR  276 (288)
Q Consensus       256 ~~--~~~A~~~~--~~~~~v~~~l~  276 (288)
                      .+  +..|++++  ++.+++.+.++
T Consensus       547 ~~~a~~~AD~vl~~~~~~~i~~~i~  571 (645)
T 3j08_A          547 SDVAVESGDIVLIRDDLRDVVAAIQ  571 (645)
T ss_dssp             SCCSSCCSSSEESSCCTTHHHHHHH
T ss_pred             cHHHHHhCCEEEecCCHHHHHHHHH
Confidence            76  46899998  46778877764

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.83  E-value=1.7e-08  Score=99.05  Aligned_cols=134  Identities=17%  Similarity=0.264  Sum_probs=99.3

Q ss_pred             hcCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcCCCCeEEEccCceeEeCCC
Q 040896           17 AKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPA   95 (288)
Q Consensus        17 ~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~~~~~~~i~~nGa~i~~~~   95 (288)
                      .....+.+++-.||+++..-.  -..++.+++.++|++|++.+ +++++||++......+...                 
T Consensus       511 ~~~g~~~~~va~~~~~~G~i~--i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~-----------------  571 (723)
T 3j09_A          511 EREAKTAVIVARNGRVEGIIA--VSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-----------------  571 (723)
T ss_dssp             HTTTCEEEEEEETTEEEEEEE--EECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-----------------
T ss_pred             HhcCCeEEEEEECCEEEEEEe--ecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-----------------
Confidence            456778899999999875210  12357889999999999985 8999999986655433210                 


Q ss_pred             CCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCCcccHHHHHHHH
Q 040896           96 GSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMV  175 (288)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l  175 (288)
                                                               +     ...                              
T Consensus       572 -----------------------------------------l-----gi~------------------------------  575 (723)
T 3j09_A          572 -----------------------------------------L-----NLD------------------------------  575 (723)
T ss_dssp             -----------------------------------------H-----TCS------------------------------
T ss_pred             -----------------------------------------c-----CCc------------------------------
Confidence                                                     0     000                              


Q ss_pred             HHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecC
Q 040896          176 NSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSV  255 (288)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na  255 (288)
                                     ..+.++.|.   +|+.+++.+.+.     +   .|+++||+.||.+||+.+     +.||+|||+
T Consensus       576 ---------------~~~~~~~P~---~K~~~v~~l~~~-----~---~v~~vGDg~ND~~al~~A-----~vgiamg~g  624 (723)
T 3j09_A          576 ---------------LVIAEVLPH---QKSEEVKKLQAK-----E---VVAFVGDGINDAPALAQA-----DLGIAVGSG  624 (723)
T ss_dssp             ---------------EEECSCCTT---CHHHHHHHHTTT-----C---CEEEEECSSTTHHHHHHS-----SEEEECCCC
T ss_pred             ---------------EEEccCCHH---HHHHHHHHHhcC-----C---eEEEEECChhhHHHHhhC-----CEEEEeCCC
Confidence                           112233455   899999998775     3   899999999999999999     899999998


Q ss_pred             CC--CccceEEe--CChhHHHHHHH
Q 040896          256 PR--ETKALYSL--RDPDEVMSFLR  276 (288)
Q Consensus       256 ~~--~~~A~~~~--~~~~~v~~~l~  276 (288)
                      .+  +..|++++  ++.+++.+.++
T Consensus       625 ~~~a~~~AD~vl~~~~~~~i~~~i~  649 (723)
T 3j09_A          625 SDVAVESGDIVLIRDDLRDVVAAIQ  649 (723)
T ss_dssp             SCCSSCCSSEECSSCCTTHHHHHHH
T ss_pred             cHHHHHhCCEEEeCCCHHHHHHHHH
Confidence            76  46899998  46778877774

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=98.82  E-value=3.8e-09  Score=87.95  Aligned_cols=69  Identities=14%  Similarity=0.124  Sum_probs=54.5

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-E-EEEecCCC--C---ccceEEeCChhHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-P-IIVSSVPR--E---TKALYSLRDPDEVMS  273 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~-v~v~na~~--~---~~A~~~~~~~~~v~~  273 (288)
                      +-.|...++.+++.++++++   ++++|||+.||+.|.+.+     |+ + +.+..+..  +   ..+++++.+..++.+
T Consensus       130 ~KP~p~~~~~~~~~lgi~~~---~~~~VGD~~~Di~~a~~a-----G~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~  201 (211)
T 2gmw_A          130 RKPHPGMLLSARDYLHIDMA---ASYMVGDKLEDMQAAVAA-----NVGTKVLVRTGKPITPEAENAADWVLNSLADLPQ  201 (211)
T ss_dssp             STTSCHHHHHHHHHHTBCGG---GCEEEESSHHHHHHHHHT-----TCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHH
T ss_pred             CCCCHHHHHHHHHHcCCCHH---HEEEEcCCHHHHHHHHHC-----CCceEEEEecCCCccccccCCCCEEeCCHHHHHH
Confidence            34567889999999999887   999999999999999998     64 4 66655432  1   258899999988888


Q ss_pred             HHHH
Q 040896          274 FLRR  277 (288)
Q Consensus       274 ~l~~  277 (288)
                      +|..
T Consensus       202 ~l~~  205 (211)
T 2gmw_A          202 AIKK  205 (211)
T ss_dssp             HHHC
T ss_pred             HHHh
Confidence            7754

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=98.73  E-value=9.2e-09  Score=78.71  Aligned_cols=50  Identities=16%  Similarity=0.175  Sum_probs=39.1

Q ss_pred             EEEEEecCCccccCcCCC-CCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhh
Q 040896           22 IVVFLDYDGTLSPIVEDP-DKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDK   71 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~-~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~   71 (288)
                      |+|+|||||||++....+ ....+++.+.++|++|++.+ .++++|||+...
T Consensus         2 k~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~   53 (126)
T 1xpj_A            2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARNMRT   53 (126)
T ss_dssp             CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred             CEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence            689999999999842100 00157789999999999885 899999999754

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=98.70  E-value=3e-08  Score=97.09  Aligned_cols=136  Identities=18%  Similarity=0.177  Sum_probs=96.9

Q ss_pred             HHHhhcCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCc
Q 040896           13 MVAAAKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHG   88 (288)
Q Consensus        13 ~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nG   88 (288)
                      +........+.+++..||+++..-.  -...+.+++.++|++|++.+ +++++|||+......+.   |+..        
T Consensus       526 ~~~~~~~G~~vl~va~d~~~~G~i~--i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~--------  595 (736)
T 3rfu_A          526 ADELRGKGASVMFMAVDGKTVALLV--VEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK--------  595 (736)
T ss_dssp             HHHHHHTTCEEEEEEETTEEEEEEE--EECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC--------
T ss_pred             HHHHHhcCCeEEEEEECCEEEEEEE--eeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE--------
Confidence            3334566789999999999875210  02257889999999999985 89999999987766553   3210        


Q ss_pred             eeEeCCCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCCcccH
Q 040896           89 MDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDI  168 (288)
Q Consensus        89 a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~  168 (288)
                                                                                                      
T Consensus       596 --------------------------------------------------------------------------------  595 (736)
T 3rfu_A          596 --------------------------------------------------------------------------------  595 (736)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce
Q 040896          169 NTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY  248 (288)
Q Consensus       169 ~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~  248 (288)
                                             .+.++.|.   +|...++.+.++    .+   .|+++||+.||.+||+.+     +.
T Consensus       596 -----------------------v~a~~~P~---~K~~~v~~l~~~----g~---~V~~vGDG~ND~paL~~A-----dv  637 (736)
T 3rfu_A          596 -----------------------VVAEIMPE---DKSRIVSELKDK----GL---IVAMAGDGVNDAPALAKA-----DI  637 (736)
T ss_dssp             -----------------------EECSCCHH---HHHHHHHHHHHH----SC---CEEEEECSSTTHHHHHHS-----SE
T ss_pred             -----------------------EEEecCHH---HHHHHHHHHHhc----CC---EEEEEECChHhHHHHHhC-----CE
Confidence                                   00111222   455555555553    23   899999999999999999     89


Q ss_pred             EEEEecCCCC--ccceEEeC--ChhHHHHHHH
Q 040896          249 PIIVSSVPRE--TKALYSLR--DPDEVMSFLR  276 (288)
Q Consensus       249 ~v~v~na~~~--~~A~~~~~--~~~~v~~~l~  276 (288)
                      ||+|||+.+.  ..|++++.  +.+++.+.++
T Consensus       638 GIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~  669 (736)
T 3rfu_A          638 GIAMGTGTDVAIESAGVTLLHGDLRGIAKARR  669 (736)
T ss_dssp             EEEESSSCSHHHHHCSEEECSCCSTTHHHHHH
T ss_pred             EEEeCCccHHHHHhCCEEEccCCHHHHHHHHH
Confidence            9999999774  58999984  5667776654

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=98.68  E-value=1.5e-08  Score=84.52  Aligned_cols=69  Identities=14%  Similarity=0.148  Sum_probs=51.7

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-E-EEEecCC--CC---ccceEEeCChhHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-P-IIVSSVP--RE---TKALYSLRDPDEVMS  273 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~-v~v~na~--~~---~~A~~~~~~~~~v~~  273 (288)
                      +-.|...++.++++++++++   ++++|||+.||+.|.+.+     |+ + +.+..+.  .+   ..+++++++..++.+
T Consensus       136 ~KP~~~~~~~~~~~~~i~~~---~~~~VGD~~~Di~~a~~a-----G~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~  207 (218)
T 2o2x_A          136 RKPNPGMLVEAGKRLALDLQ---RSLIVGDKLADMQAGKRA-----GLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLA  207 (218)
T ss_dssp             STTSCHHHHHHHHHHTCCGG---GCEEEESSHHHHHHHHHT-----TCSEEEEETCCCEEETTEEEEEESSHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCHH---HEEEEeCCHHHHHHHHHC-----CCCEeEEEecCCCCcccccCCCCEecccHHHHHH
Confidence            45677899999999999887   999999999999999988     65 3 5554432  11   256666667777776


Q ss_pred             HHHH
Q 040896          274 FLRR  277 (288)
Q Consensus       274 ~l~~  277 (288)
                      +|.+
T Consensus       208 ~l~~  211 (218)
T 2o2x_A          208 AIET  211 (218)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6654

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=98.67  E-value=1.6e-08  Score=82.98  Aligned_cols=82  Identities=15%  Similarity=0.112  Sum_probs=62.3

Q ss_pred             CCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeC
Q 040896          189 GGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLR  266 (288)
Q Consensus       189 ~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~  266 (288)
                      ....+.++.++ +.+|+.+++.+++.++++++   ++++|||+.||++|++. .-..-++++.++|+.+  +..|+++++
T Consensus       135 ~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~---~~~~vGD~~~Di~~~~~-G~~~~~v~~~~~~~~~~~~~~ad~v~~  209 (219)
T 3kd3_A          135 SDGSFKELDNS-NGACDSKLSAFDKAKGLIDG---EVIAIGDGYTDYQLYEK-GYATKFIAYMEHIEREKVINLSKYVAR  209 (219)
T ss_dssp             TTSBEEEEECT-TSTTTCHHHHHHHHGGGCCS---EEEEEESSHHHHHHHHH-TSCSEEEEECSSCCCHHHHHHCSEEES
T ss_pred             CCCceeccCCC-CCCcccHHHHHHHHhCCCCC---CEEEEECCHhHHHHHhC-CCCcEEEeccCccccHHHHhhcceeeC
Confidence            44677788888 99999999999999999888   99999999999999864 1000034444444433  247999999


Q ss_pred             ChhHHHHHH
Q 040896          267 DPDEVMSFL  275 (288)
Q Consensus       267 ~~~~v~~~l  275 (288)
                      +.+++.++|
T Consensus       210 ~~~el~~~l  218 (219)
T 3kd3_A          210 NVAELASLI  218 (219)
T ss_dssp             SHHHHHHHH
T ss_pred             CHHHHHHhh
Confidence            999887765

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=98.66  E-value=2.9e-08  Score=80.55  Aligned_cols=66  Identities=27%  Similarity=0.351  Sum_probs=57.7

Q ss_pred             EeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCCccceEEeCChhHHHHHH
Q 040896          196 IRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFL  275 (288)
Q Consensus       196 I~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~~~A~~~~~~~~~v~~~l  275 (288)
                      ..|. ..+|+.+++.+      +++   ++++|||+.||++|++.+     |++++|+|+..  .|++++.+.+++.++|
T Consensus       134 ~~~~-~~~k~~~l~~l------~~~---~~i~iGD~~~Di~~~~~a-----g~~v~~~~~~~--~ad~v~~~~~el~~~l  196 (201)
T 4ap9_A          134 IRLR-FRDKGEFLKRF------RDG---FILAMGDGYADAKMFERA-----DMGIAVGREIP--GADLLVKDLKELVDFI  196 (201)
T ss_dssp             EECC-SSCHHHHHGGG------TTS---CEEEEECTTCCHHHHHHC-----SEEEEESSCCT--TCSEEESSHHHHHHHH
T ss_pred             CcCC-ccCHHHHHHhc------CcC---cEEEEeCCHHHHHHHHhC-----CceEEECCCCc--cccEEEccHHHHHHHH
Confidence            4555 67899999987      445   999999999999999999     89999999877  9999999999999988


Q ss_pred             HHH
Q 040896          276 RRL  278 (288)
Q Consensus       276 ~~~  278 (288)
                      +++
T Consensus       197 ~~l  199 (201)
T 4ap9_A          197 KNL  199 (201)
T ss_dssp             HTC
T ss_pred             HHh
Confidence            765

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=98.65  E-value=5.5e-08  Score=98.95  Aligned_cols=69  Identities=19%  Similarity=0.147  Sum_probs=56.0

Q ss_pred             EEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEe-cCCC--CccceEEeCC--
Q 040896          193 VMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVS-SVPR--ETKALYSLRD--  267 (288)
Q Consensus       193 ~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~-na~~--~~~A~~~~~~--  267 (288)
                      +..+.|.   .|...++.+.+. |   .   .|+++||+.||.+||+.+     ++||+|| |+.+  +.+|++++.+  
T Consensus       700 ~ar~~P~---~K~~iv~~lq~~-g---~---~V~a~GDG~ND~~mLk~A-----~vGIAMg~ng~d~aK~aAD~Vl~~~~  764 (1034)
T 3ixz_A          700 FARTSPQ---QKLVIVESCQRL-G---A---IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDAAKNAADMILLDDN  764 (1034)
T ss_pred             EEecCHH---HHHHHHHHHHHc-C---C---EEEEECCcHHhHHHHHHC-----CeeEEeCCccCHHHHHhcCEEeccCC
Confidence            4555666   899988887764 2   3   899999999999999999     8999999 8876  4689999864  


Q ss_pred             hhHHHHHHH
Q 040896          268 PDEVMSFLR  276 (288)
Q Consensus       268 ~~~v~~~l~  276 (288)
                      .++++..++
T Consensus       765 ~~gI~~ai~  773 (1034)
T 3ixz_A          765 FASIVTGVE  773 (1034)
T ss_pred             chHHHHHHH
Confidence            667888774

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.65  E-value=5.1e-08  Score=81.31  Aligned_cols=74  Identities=26%  Similarity=0.202  Sum_probs=62.9

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhH-HHHHHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDE-VMSFLR  276 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~-v~~~l~  276 (288)
                      .+|..+++.+++.+|++++   ++++|||+.||++|++.+     |++++|+|+.+.  ..|++++.+  .+| +.++++
T Consensus       123 k~K~~~l~~~~~~lg~~~~---~~~~vGDs~nDi~~~~~a-----g~~~a~~~~~~~~~~~Ad~v~~~~~~~G~v~e~~~  194 (211)
T 3ij5_A          123 SDKLVAYHELLATLQCQPE---QVAYIGDDLIDWPVMAQV-----GLSVAVADAHPLLLPKAHYVTRIKGGRGAVREVCD  194 (211)
T ss_dssp             SSHHHHHHHHHHHHTCCGG---GEEEEECSGGGHHHHTTS-----SEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred             CChHHHHHHHHHHcCcCcc---eEEEEcCCHHHHHHHHHC-----CCEEEeCCccHHHHhhCCEEEeCCCCCcHHHHHHH
Confidence            4899999999999999987   999999999999999999     899999998664  579999875  344 777777


Q ss_pred             HHHHHhh
Q 040896          277 RLARWKK  283 (288)
Q Consensus       277 ~~~~~~~  283 (288)
                      .++..+.
T Consensus       195 ~ll~~~~  201 (211)
T 3ij5_A          195 LILLAQD  201 (211)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHcC
Confidence            7776543

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=98.64  E-value=3.9e-08  Score=80.64  Aligned_cols=69  Identities=16%  Similarity=0.183  Sum_probs=61.4

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCC--CccceEEeCChhHHHHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPR--ETKALYSLRDPDEVMSFLRR  277 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~--~~~A~~~~~~~~~v~~~l~~  277 (288)
                      +..|..+++.+++.+|++++   ++++|||+.||++|.+.+     |+ +|+|+|+..  +..|++++.+.+++.+.|+.
T Consensus       126 ~kp~~~~~~~~~~~~g~~~~---~~i~iGD~~~Di~~a~~a-----G~~~i~v~~~~~~~~~~ad~v~~~~~el~~~~~~  197 (205)
T 3m9l_A          126 PKPHPGGLLKLAEAWDVSPS---RMVMVGDYRFDLDCGRAA-----GTRTVLVNLPDNPWPELTDWHARDCAQLRDLLSA  197 (205)
T ss_dssp             CTTSSHHHHHHHHHTTCCGG---GEEEEESSHHHHHHHHHH-----TCEEEECSSSSCSCGGGCSEECSSHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHc-----CCEEEEEeCCCCcccccCCEEeCCHHHHHHHHHh
Confidence            56788999999999999987   999999999999999999     77 999999865  35799999999999887753

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=98.63  E-value=3e-07  Score=79.98  Aligned_cols=141  Identities=17%  Similarity=0.248  Sum_probs=97.9

Q ss_pred             HHHHHHhh-cCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcCCCCeEEEccC
Q 040896           10 FDRMVAAA-KGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQLKNVVYAGSH   87 (288)
Q Consensus        10 ~~~~~~~~-~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~~~~~~~i~~n   87 (288)
                      ++.+...+ ....+++++|+|+++.....  ....+.|.+.++|+.|++.+ +++++||++...+...+...++      
T Consensus       131 ~~~~~~~~~~~g~~~i~~~~d~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl------  202 (287)
T 3a1c_A          131 VELALEKLEREAKTAVIVARNGRVEGIIA--VSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------  202 (287)
T ss_dssp             HHHHHHHHHHTTCEEEEEEETTEEEEEEE--EECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTC------
T ss_pred             HHHHHHHHHhCCCeEEEEEECCEEEEEEE--eccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCC------
Confidence            44444433 45678999999999875211  13357789999999999885 8999999987766555421000      


Q ss_pred             ceeEeCCCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCCccc
Q 040896           88 GMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDD  167 (288)
Q Consensus        88 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~  167 (288)
                               . .                                                          + +       
T Consensus       203 ---------~-~----------------------------------------------------------~-f-------  206 (287)
T 3a1c_A          203 ---------D-L----------------------------------------------------------V-I-------  206 (287)
T ss_dssp             ---------S-E----------------------------------------------------------E-E-------
T ss_pred             ---------c-e----------------------------------------------------------e-e-------
Confidence                     0 0                                                          0 0       


Q ss_pred             HHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCc
Q 040896          168 INTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRG  247 (288)
Q Consensus       168 ~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g  247 (288)
                                                -++.|.   +|..+++.+    +.. +   ++++|||+.||++|++.+     |
T Consensus       207 --------------------------~~i~~~---~K~~~~~~l----~~~-~---~~~~vGDs~~Di~~a~~a-----g  244 (287)
T 3a1c_A          207 --------------------------AEVLPH---QKSEEVKKL----QAK-E---VVAFVGDGINDAPALAQA-----D  244 (287)
T ss_dssp             --------------------------CSCCTT---CHHHHHHHH----TTT-C---CEEEEECTTTCHHHHHHS-----S
T ss_pred             --------------------------eecChH---HHHHHHHHH----hcC-C---eEEEEECCHHHHHHHHHC-----C
Confidence                                      000133   676666654    444 5   999999999999999999     8


Q ss_pred             eEEEEecCCC--CccceEEe--CChhHHHHHHH
Q 040896          248 YPIIVSSVPR--ETKALYSL--RDPDEVMSFLR  276 (288)
Q Consensus       248 ~~v~v~na~~--~~~A~~~~--~~~~~v~~~l~  276 (288)
                      ++++++|+.+  ...|++++  ++..++.++|+
T Consensus       245 ~~v~~~~~~~~~~~~ad~v~~~~~~~~l~~~l~  277 (287)
T 3a1c_A          245 LGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ  277 (287)
T ss_dssp             EEEEECCCSCCSSCCSSEEESSSCTHHHHHHHH
T ss_pred             eeEEeCCCCHHHHhhCCEEEeCCCHHHHHHHHH
Confidence            9999998754  35789999  78888887764

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=98.62  E-value=1.4e-08  Score=83.04  Aligned_cols=65  Identities=25%  Similarity=0.337  Sum_probs=55.5

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCC--hhHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRD--PDEVMSF  274 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~--~~~v~~~  274 (288)
                      +.+|+.++..+++++|++++   ++++|||+.||++|++.+     |++++|+ +.+  +..|++++.+  .+++..+
T Consensus       141 ~~~K~~~l~~~~~~lgi~~~---~~~~iGD~~~Di~~~~~a-----g~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~~  209 (211)
T 1l7m_A          141 ENAKGEILEKIAKIEGINLE---DTVAVGDGANDISMFKKA-----GLKIAFC-AKPILKEKADICIEKRDLREILKY  209 (211)
T ss_dssp             TTHHHHHHHHHHHHHTCCGG---GEEEEECSGGGHHHHHHC-----SEEEEES-CCHHHHTTCSEEECSSCGGGGGGG
T ss_pred             CccHHHHHHHHHHHcCCCHH---HEEEEecChhHHHHHHHC-----CCEEEEC-CCHHHHhhcceeecchhHHHHHHh
Confidence            67999999999999999987   999999999999999999     8999987 433  3579999876  6666543

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=98.60  E-value=3.8e-08  Score=81.60  Aligned_cols=77  Identities=13%  Similarity=0.125  Sum_probs=64.4

Q ss_pred             EeCCCC--CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceE-EEEecCCCC---------cc-ce
Q 040896          196 IRPCID--WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYP-IIVSSVPRE---------TK-AL  262 (288)
Q Consensus       196 I~~~~~--~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~-v~v~na~~~---------~~-A~  262 (288)
                      ..+. +  .+|+.+++.+++++|++++   ++++|||+.||++|++.+     |++ ++|+++...         .. |+
T Consensus       136 ~~~~-~~~kpk~~~~~~~~~~l~~~~~---~~i~iGD~~~Di~~a~~a-----G~~~i~~~~~~~~~~~~~~~l~~~~ad  206 (229)
T 2fdr_A          136 DLGA-DRVKPKPDIFLHGAAQFGVSPD---RVVVVEDSVHGIHGARAA-----GMRVIGFTGASHTYPSHADRLTDAGAE  206 (229)
T ss_dssp             HHCT-TCCTTSSHHHHHHHHHHTCCGG---GEEEEESSHHHHHHHHHT-----TCEEEEECCSTTCCTTHHHHHHHHTCS
T ss_pred             cccc-CCCCcCHHHHHHHHHHcCCChh---HeEEEcCCHHHHHHHHHC-----CCEEEEEecCCccchhhhHHHhhcCCc
Confidence            3467 7  8999999999999999987   999999999999999999     786 777776441         13 89


Q ss_pred             EEeCChhHHHHHHHHHHHH
Q 040896          263 YSLRDPDEVMSFLRRLARW  281 (288)
Q Consensus       263 ~~~~~~~~v~~~l~~~~~~  281 (288)
                      +++++.+++.++|+++..|
T Consensus       207 ~v~~~~~el~~~l~~~~~~  225 (229)
T 2fdr_A          207 TVISRMQDLPAVIAAMAEW  225 (229)
T ss_dssp             EEESCGGGHHHHHHHHTC-
T ss_pred             eeecCHHHHHHHHHHhhhh
Confidence            9999999999998877543

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=98.59  E-value=3.7e-08  Score=81.15  Aligned_cols=72  Identities=11%  Similarity=0.050  Sum_probs=59.5

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC-ccceEEeCChhH--HHHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE-TKALYSLRDPDE--VMSFLRR  277 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~-~~A~~~~~~~~~--v~~~l~~  277 (288)
                      +..|..+++.+++++|++++   ++++|||+.||++|++.+     |++++|.|+.+. ..|++++.+.++  +..+++.
T Consensus       144 ~Kp~~~~~~~~~~~lgi~~~---~~i~iGD~~nDi~~a~~a-----G~~~~~~~~~~~~~~a~~v~~~~~el~~~~~~~~  215 (221)
T 2wf7_A          144 SKPAPDIFIAAAHAVGVAPS---ESIGLEDSQAGIQAIKDS-----GALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEV  215 (221)
T ss_dssp             CTTSSHHHHHHHHHTTCCGG---GEEEEESSHHHHHHHHHH-----TCEEEEESCHHHHCSSSEEESSGGGCCHHHHHHH
T ss_pred             CCCChHHHHHHHHHcCCChh---HeEEEeCCHHHHHHHHHC-----CCEEEEECCHHHhccccchhcCHHhCCHHHHHHH
Confidence            34566799999999999987   999999999999999999     899999998542 389999987654  6776666


Q ss_pred             HHH
Q 040896          278 LAR  280 (288)
Q Consensus       278 ~~~  280 (288)
                      ++.
T Consensus       216 ~~~  218 (221)
T 2wf7_A          216 WLQ  218 (221)
T ss_dssp             HHC
T ss_pred             Hhc
Confidence            553

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=98.58  E-value=6.9e-07  Score=73.40  Aligned_cols=55  Identities=11%  Similarity=0.065  Sum_probs=40.9

Q ss_pred             CcEEEEEecCCccccCcCC-C-------CCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhh
Q 040896           20 KKIVVFLDYDGTLSPIVED-P-------DKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSR   74 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~-~-------~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~   74 (288)
                      ..++||||+||||++.... +       ....+-+.+.++|++|++++ +++|+||++...+..
T Consensus         5 ~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~   68 (196)
T 2oda_A            5 TFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTP   68 (196)
T ss_dssp             CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHH
T ss_pred             cCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHH
Confidence            4689999999999973210 0       01245688999999999885 999999987766533

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=98.57  E-value=4.5e-08  Score=79.37  Aligned_cols=63  Identities=21%  Similarity=0.293  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceE-EEEecCCCCccceEEeCChhHHHHHHH
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYP-IIVSSVPRETKALYSLRDPDEVMSFLR  276 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~-v~v~na~~~~~A~~~~~~~~~v~~~l~  276 (288)
                      +..+++.+++++|++++   ++++|||+.||++|++.+     |++ ++|+|+. . .|++++++.+++.++|+
T Consensus       142 ~~~~~~~~~~~~~i~~~---~~~~iGD~~nDi~~~~~a-----G~~~i~~~~~~-~-~a~~v~~~~~el~~~l~  205 (207)
T 2go7_A          142 SPEAATYLLDKYQLNSD---NTYYIGDRTLDVEFAQNS-----GIQSINFLEST-Y-EGNHRIQALADISRIFE  205 (207)
T ss_dssp             SSHHHHHHHHHHTCCGG---GEEEEESSHHHHHHHHHH-----TCEEEESSCCS-C-TTEEECSSTTHHHHHTS
T ss_pred             CcHHHHHHHHHhCCCcc---cEEEECCCHHHHHHHHHC-----CCeEEEEecCC-C-CCCEEeCCHHHHHHHHh
Confidence            38999999999999987   999999999999999999     886 8899887 5 89999999988877663

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=98.52  E-value=3.6e-08  Score=84.14  Aligned_cols=76  Identities=16%  Similarity=0.163  Sum_probs=61.3

Q ss_pred             EeCCCCCCHHHHHHHHHHhcCCCC-CCCceeEEEcCCcccHHHHHHHHhcCCce---EEEEecCC---------------
Q 040896          196 IRPCIDWDKGRALEYLLDTFGFNN-ASDFLPLYIGDDKTDEDAFKVIRHMGRGY---PIIVSSVP---------------  256 (288)
Q Consensus       196 I~~~~~~sKg~al~~l~~~~~~~~-~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~---~v~v~na~---------------  256 (288)
                      ..+. +.+|+.+++.+++++|+++ +   ++++|||+.||++|++.+     |+   +|+++++.               
T Consensus       155 ~~~~-~kp~~~~~~~~~~~lgi~~~~---~~i~iGD~~nDi~~a~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~~  225 (267)
T 1swv_A          155 DVPA-GRPYPWMCYKNAMELGVYPMN---HMIKVGDTVSDMKEGRNA-----GMWTVGVILGSSELGLTEEEVENMDSVE  225 (267)
T ss_dssp             GSSC-CTTSSHHHHHHHHHHTCCSGG---GEEEEESSHHHHHHHHHT-----TSEEEEECTTCTTTCCCHHHHHHSCHHH
T ss_pred             ccCC-CCCCHHHHHHHHHHhCCCCCc---CEEEEeCCHHHHHHHHHC-----CCEEEEEcCCCCccCccHHHHhhchhhh
Confidence            3566 7899999999999999987 7   999999999999999999     64   44445442               


Q ss_pred             ---------C---CccceEEeCChhHHHHHHHHHHH
Q 040896          257 ---------R---ETKALYSLRDPDEVMSFLRRLAR  280 (288)
Q Consensus       257 ---------~---~~~A~~~~~~~~~v~~~l~~~~~  280 (288)
                               .   +..|++++.+.+++.++|+.+..
T Consensus       226 ~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~~~  261 (267)
T 1swv_A          226 LREKIEVVRNRFVENGAHFTIETMQELESVMEHIEK  261 (267)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHTC
T ss_pred             hhhhhhhHHHHHHhcCCceeccCHHHHHHHHHHHhh
Confidence                     1   13489999999999998877643

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=98.51  E-value=1.9e-07  Score=78.64  Aligned_cols=73  Identities=10%  Similarity=-0.019  Sum_probs=63.3

Q ss_pred             EEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecC-----C---C----Cccce
Q 040896          195 EIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSV-----P---R----ETKAL  262 (288)
Q Consensus       195 eI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na-----~---~----~~~A~  262 (288)
                      +..+. +..|+.+++.+++++|++++   ++++|||+.||++|.+.+     |++++|.|.     .   +    +..|+
T Consensus       167 ~~~~~-~kp~~~~~~~~~~~lgi~~~---~~~~iGD~~~Di~~a~~a-----G~~~~~~~~~~~~g~~~~~~l~~~~~ad  237 (254)
T 3umc_A          167 DLFGH-YKPDPQVYLGACRLLDLPPQ---EVMLCAAHNYDLKAARAL-----GLKTAFIARPLEYGPGQSQDLAAEQDWD  237 (254)
T ss_dssp             HHHTC-CTTSHHHHHHHHHHHTCCGG---GEEEEESCHHHHHHHHHT-----TCEEEEECCTTTTCTTCCSSSSCSSCCS
T ss_pred             ccccc-CCCCHHHHHHHHHHcCCChH---HEEEEcCchHhHHHHHHC-----CCeEEEEecCCccCCCCCcccccCCCCc
Confidence            45677 88999999999999999987   999999999999999999     899999882     1   1    34789


Q ss_pred             EEeCChhHHHHHHH
Q 040896          263 YSLRDPDEVMSFLR  276 (288)
Q Consensus       263 ~~~~~~~~v~~~l~  276 (288)
                      +++++..++.++|.
T Consensus       238 ~v~~~l~el~~~l~  251 (254)
T 3umc_A          238 LIASDLLDLHRQLA  251 (254)
T ss_dssp             EEESSHHHHHHHHH
T ss_pred             EEECCHHHHHHHhc
Confidence            99999999988774

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=98.50  E-value=8.5e-08  Score=79.87  Aligned_cols=77  Identities=10%  Similarity=0.003  Sum_probs=55.2

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC-ccceEEeCChhH--HHHH
Q 040896          198 PCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE-TKALYSLRDPDE--VMSF  274 (288)
Q Consensus       198 ~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~-~~A~~~~~~~~~--v~~~  274 (288)
                      .. +..|..+++.+++++|++++   ++++|||+.||+.|.+.+     |+++++.|+... ..|++++.+.++  +..+
T Consensus       143 ~~-~Kp~~~~~~~~~~~lgi~~~---~~i~vGDs~~Di~~a~~a-----G~~~~~~~~~~~~~~ad~v~~s~~el~~~~~  213 (233)
T 3nas_A          143 AK-GKPDPDIFLTAAAMLDVSPA---DCAAIEDAEAGISAIKSA-----GMFAVGVGQGQPMLGADLVVRQTSDLTLELL  213 (233)
T ss_dssp             -------CCHHHHHHHHHTSCGG---GEEEEECSHHHHHHHHHT-----TCEEEECC-------CSEECSSGGGCCHHHH
T ss_pred             CC-CCCChHHHHHHHHHcCCCHH---HEEEEeCCHHHHHHHHHc-----CCEEEEECCccccccCCEEeCChHhCCHHHH
Confidence            44 56778899999999999987   999999999999999999     899999987653 489999988654  5666


Q ss_pred             HHHHHHHhh
Q 040896          275 LRRLARWKK  283 (288)
Q Consensus       275 l~~~~~~~~  283 (288)
                      ++.+-..++
T Consensus       214 ~~~~~~~~~  222 (233)
T 3nas_A          214 HEEWEQYRI  222 (233)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            665544443

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=98.41  E-value=1.6e-07  Score=77.23  Aligned_cols=62  Identities=19%  Similarity=0.222  Sum_probs=54.4

Q ss_pred             EeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCC
Q 040896          196 IRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRD  267 (288)
Q Consensus       196 I~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~  267 (288)
                      ..+. +..|..+++.+++.+|++++   ++++|||+.||++|++.+     |++++| |+.+  +..|++++.+
T Consensus       136 ~~~~-~k~k~~~~~~~~~~~g~~~~---~~i~vGDs~~Di~~a~~a-----G~~~~~-~~~~~l~~~ad~v~~~  199 (217)
T 3m1y_A          136 HMMF-SHSKGEMLLVLQRLLNISKT---NTLVVGDGANDLSMFKHA-----HIKIAF-NAKEVLKQHATHCINE  199 (217)
T ss_dssp             SCCS-TTHHHHHHHHHHHHHTCCST---TEEEEECSGGGHHHHTTC-----SEEEEE-SCCHHHHTTCSEEECS
T ss_pred             CCCC-CCChHHHHHHHHHHcCCCHh---HEEEEeCCHHHHHHHHHC-----CCeEEE-CccHHHHHhcceeecc
Confidence            3446 78999999999999999988   999999999999999999     899999 7765  3689999875

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=98.39  E-value=6.4e-07  Score=75.13  Aligned_cols=74  Identities=15%  Similarity=0.079  Sum_probs=62.7

Q ss_pred             EEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCC------------CCccce
Q 040896          195 EIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVP------------RETKAL  262 (288)
Q Consensus       195 eI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~------------~~~~A~  262 (288)
                      +..+. +..|+.+++.+++++|++++   ++++|||+.||+.|.+.+     |+++++.|..            .+..|+
T Consensus       163 ~~~~~-~kp~~~~~~~~~~~lgi~~~---~~~~iGD~~~Di~~a~~a-----G~~~~~~~~~~~~g~~~~~~~~~~~~~d  233 (254)
T 3umg_A          163 DINRK-YKPDPQAYLRTAQVLGLHPG---EVMLAAAHNGDLEAAHAT-----GLATAFILRPVEHGPHQTDDLAPTGSWD  233 (254)
T ss_dssp             HHHTC-CTTSHHHHHHHHHHTTCCGG---GEEEEESCHHHHHHHHHT-----TCEEEEECCTTTTCTTCCSCSSCSSCCS
T ss_pred             CcCCC-CCCCHHHHHHHHHHcCCChH---HEEEEeCChHhHHHHHHC-----CCEEEEEecCCcCCCCccccccccCCCc
Confidence            33456 67889999999999999987   999999999999999999     8998888732            134788


Q ss_pred             EEeCChhHHHHHHHH
Q 040896          263 YSLRDPDEVMSFLRR  277 (288)
Q Consensus       263 ~~~~~~~~v~~~l~~  277 (288)
                      +++++..++.++|..
T Consensus       234 ~~~~~~~el~~~l~~  248 (254)
T 3umg_A          234 ISATDITDLAAQLRA  248 (254)
T ss_dssp             EEESSHHHHHHHHHH
T ss_pred             eEECCHHHHHHHhcC
Confidence            999999999888754

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=98.37  E-value=3.9e-07  Score=76.57  Aligned_cols=73  Identities=12%  Similarity=0.054  Sum_probs=62.6

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCCC------ccceEEeCChhH
Q 040896          198 PCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPRE------TKALYSLRDPDE  270 (288)
Q Consensus       198 ~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~~------~~A~~~~~~~~~  270 (288)
                      .. +..|+.+++.+++++|++++   ++++|||+.||+.|.+.+     |+ ++.|.++...      ..|++++.+.++
T Consensus       163 ~~-~kp~~~~~~~~~~~lg~~~~---~~i~vGD~~~Di~~a~~a-----G~~~i~v~~~~~~~~~l~~~~ad~v~~s~~e  233 (243)
T 3qxg_A          163 KY-GKPNPEPYLMALKKGGLKAD---EAVVIENAPLGVEAGHKA-----GIFTIAVNTGPLDGQVLLDAGADLLFPSMQT  233 (243)
T ss_dssp             SS-CTTSSHHHHHHHHHTTCCGG---GEEEEECSHHHHHHHHHT-----TCEEEEECCSSSCHHHHHHTTCSEEESCHHH
T ss_pred             CC-CCCChHHHHHHHHHcCCCHH---HeEEEeCCHHHHHHHHHC-----CCEEEEEeCCCCCHHHHHhcCCCEEECCHHH
Confidence            45 67899999999999999988   999999999999999999     76 6777766432      269999999999


Q ss_pred             HHHHHHHHH
Q 040896          271 VMSFLRRLA  279 (288)
Q Consensus       271 v~~~l~~~~  279 (288)
                      +.++|++++
T Consensus       234 l~~~l~~li  242 (243)
T 3qxg_A          234 LCDSWDTIM  242 (243)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHhhh
Confidence            999998763

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=98.37  E-value=2.3e-07  Score=79.79  Aligned_cols=62  Identities=19%  Similarity=0.050  Sum_probs=45.6

Q ss_pred             hhHHHHHHhhcCCcEEEEEecCCccccCcCC-----------C---------CCCCCCHHHHHHHHHHhhcC-CEEEEcC
Q 040896            8 DTFDRMVAAAKGKKIVVFLDYDGTLSPIVED-----------P---------DKAFMSDTMRMAVHEVAHFF-PTAIVSG   66 (288)
Q Consensus         8 ~~~~~~~~~~~~~~~li~~DlDGTL~~~~~~-----------~---------~~~~i~~~~~~aL~~L~~~~-~v~i~TG   66 (288)
                      .-|++.+.....+.++|+||+||||++....           +         ....+.|.+.++|++|++.+ +++|+||
T Consensus        46 ~~~~~~~~~~~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTn  125 (258)
T 2i33_A           46 LKLDAALAKGTEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISN  125 (258)
T ss_dssp             HHHHHHHHHCCSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEE
T ss_pred             HHHHHHHhccCCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcC
Confidence            3445444444567899999999999983100           0         01467889999999999995 8999999


Q ss_pred             CCh
Q 040896           67 RCL   69 (288)
Q Consensus        67 R~~   69 (288)
                      |+.
T Consensus       126 r~~  128 (258)
T 2i33_A          126 RKT  128 (258)
T ss_dssp             EEG
T ss_pred             Cch
Confidence            994

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=98.34  E-value=3.2e-07  Score=76.84  Aligned_cols=75  Identities=16%  Similarity=0.055  Sum_probs=64.3

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCC--C----ccceEEeCChhH
Q 040896          198 PCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPR--E----TKALYSLRDPDE  270 (288)
Q Consensus       198 ~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~--~----~~A~~~~~~~~~  270 (288)
                      +. +..|+.+++.+++++|++++   ++++|||+.||++|.+.+     |+ ++.|.++..  +    ..|++++++.++
T Consensus       162 ~~-~kp~~~~~~~~~~~lg~~~~---~~i~vGD~~~Di~~a~~a-----G~~~i~v~~~~~~~~~l~~~~ad~v~~~~~e  232 (247)
T 3dv9_A          162 KY-GKPNPEPYLMALKKGGFKPN---EALVIENAPLGVQAGVAA-----GIFTIAVNTGPLHDNVLLNEGANLLFHSMPD  232 (247)
T ss_dssp             SS-CTTSSHHHHHHHHHHTCCGG---GEEEEECSHHHHHHHHHT-----TSEEEEECCSSSCHHHHHTTTCSEEESSHHH
T ss_pred             CC-CCCCCHHHHHHHHHcCCChh---heEEEeCCHHHHHHHHHC-----CCeEEEEcCCCCCHHHHHhcCCCEEECCHHH
Confidence            56 77899999999999999987   999999999999999999     75 467766543  1    379999999999


Q ss_pred             HHHHHHHHHHH
Q 040896          271 VMSFLRRLARW  281 (288)
Q Consensus       271 v~~~l~~~~~~  281 (288)
                      +.++|++++..
T Consensus       233 l~~~l~~~~~~  243 (247)
T 3dv9_A          233 FNKNWETLQSA  243 (247)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998764

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=98.32  E-value=3.4e-07  Score=75.79  Aligned_cols=73  Identities=16%  Similarity=0.162  Sum_probs=60.5

Q ss_pred             eCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEE----ecCCC--CccceEEeCChhH
Q 040896          197 RPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV----SSVPR--ETKALYSLRDPDE  270 (288)
Q Consensus       197 ~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v----~na~~--~~~A~~~~~~~~~  270 (288)
                      .+. +..|..+++.+++++|++++   ++++|||+.||+.|.+.+     |+++++    +|+.+  +..|++++++.++
T Consensus       148 ~~~-~kp~~~~~~~~~~~~~~~~~---~~~~iGD~~~Di~~a~~a-----G~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  218 (230)
T 3um9_A          148 VRL-FKPHQKVYELAMDTLHLGES---EILFVSCNSWDATGAKYF-----GYPVCWINRSNGVFDQLGVVPDIVVSDVGV  218 (230)
T ss_dssp             TTC-CTTCHHHHHHHHHHHTCCGG---GEEEEESCHHHHHHHHHH-----TCCEEEECTTSCCCCCSSCCCSEEESSHHH
T ss_pred             ccc-CCCChHHHHHHHHHhCCCcc---cEEEEeCCHHHHHHHHHC-----CCEEEEEeCCCCccccccCCCcEEeCCHHH
Confidence            345 66789999999999999987   999999999999999999     888777    44433  2589999999999


Q ss_pred             HHHHHHHH
Q 040896          271 VMSFLRRL  278 (288)
Q Consensus       271 v~~~l~~~  278 (288)
                      +.++|+++
T Consensus       219 l~~~l~~~  226 (230)
T 3um9_A          219 LASRFSPV  226 (230)
T ss_dssp             HHHTCCC-
T ss_pred             HHHHHHHh
Confidence            98877654

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=98.32  E-value=7.9e-07  Score=73.82  Aligned_cols=71  Identities=14%  Similarity=0.158  Sum_probs=60.0

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEE----ecCCCC--ccceEEeCChhHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV----SSVPRE--TKALYSLRDPDEVMSF  274 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v----~na~~~--~~A~~~~~~~~~v~~~  274 (288)
                      +-.|..+++.+++.+|++++   ++++|||+.||+.|.+.+     |+++++    +|+.+.  ..|++++++.+++.++
T Consensus       154 ~kp~~~~~~~~~~~~~~~~~---~~~~vGD~~~Di~~a~~~-----G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~  225 (233)
T 3umb_A          154 YKTAPAAYALAPRAFGVPAA---QILFVSSNGWDACGATWH-----GFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQF  225 (233)
T ss_dssp             CTTSHHHHTHHHHHHTSCGG---GEEEEESCHHHHHHHHHH-----TCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHH
T ss_pred             CCcCHHHHHHHHHHhCCCcc---cEEEEeCCHHHHHHHHHc-----CCEEEEEcCCCCCchhccCCCCEEECCHHHHHHH
Confidence            45678899999999999987   999999999999999999     898888    555443  5799999999999998


Q ss_pred             HHHHH
Q 040896          275 LRRLA  279 (288)
Q Consensus       275 l~~~~  279 (288)
                      |++.-
T Consensus       226 l~~~~  230 (233)
T 3umb_A          226 VQARQ  230 (233)
T ss_dssp             HHC--
T ss_pred             HHHhh
Confidence            87643

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=98.29  E-value=7.8e-06  Score=66.36  Aligned_cols=64  Identities=14%  Similarity=0.258  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCC-cccHHHHHHHHhcCCce-EEEEecCCC----C----ccceEEeC--ChhHH
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDD-KTDEDAFKVIRHMGRGY-PIIVSSVPR----E----TKALYSLR--DPDEV  271 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs-~ND~~Ml~~~~~~~~g~-~v~v~na~~----~----~~A~~~~~--~~~~v  271 (288)
                      +....+.+++.+|++++   ++++|||+ .+|+.+-+.+     |+ ++.+.++..    +    ..++++++  +..++
T Consensus        99 ~p~~~~~~~~~~~~~~~---~~l~VGD~~~~Di~~A~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l  170 (189)
T 3ib6_A           99 DKTIFDFTLNALQIDKT---EAVMVGNTFESDIIGANRA-----GIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADV  170 (189)
T ss_dssp             SHHHHHHHHHHHTCCGG---GEEEEESBTTTTHHHHHHT-----TCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGH
T ss_pred             CHHHHHHHHHHcCCCcc---cEEEECCCcHHHHHHHHHC-----CCeEEEECCccccccccccccCCCcceeccccHHhH
Confidence            34677778888888877   99999999 7999998888     54 566765432    1    26788888  88888


Q ss_pred             HHHH
Q 040896          272 MSFL  275 (288)
Q Consensus       272 ~~~l  275 (288)
                      .++|
T Consensus       171 ~~~l  174 (189)
T 3ib6_A          171 PEAL  174 (189)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8776

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=98.28  E-value=1.3e-06  Score=72.54  Aligned_cols=71  Identities=17%  Similarity=0.195  Sum_probs=61.4

Q ss_pred             eCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCC-cccHHHHHHHHhcCCceEEEEecCCC----CccceEEeCChhHH
Q 040896          197 RPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDD-KTDEDAFKVIRHMGRGYPIIVSSVPR----ETKALYSLRDPDEV  271 (288)
Q Consensus       197 ~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs-~ND~~Ml~~~~~~~~g~~v~v~na~~----~~~A~~~~~~~~~v  271 (288)
                      .+. +..|+.+++.+++++|++++   ++++|||+ .||++|.+.+     |+++++.|...    +..|++++++.+++
T Consensus       158 ~~~-~kp~~~~~~~~~~~lgi~~~---~~~~iGD~~~~Di~~a~~a-----G~~~~~~~~~~~~~~~~~~d~vi~sl~e~  228 (240)
T 3qnm_A          158 LGV-LKPRPEIFHFALSATQSELR---ESLMIGDSWEADITGAHGV-----GMHQAFYNVTERTVFPFQPTYHIHSLKEL  228 (240)
T ss_dssp             TTC-CTTSHHHHHHHHHHTTCCGG---GEEEEESCTTTTHHHHHHT-----TCEEEEECCSCCCCCSSCCSEEESSTHHH
T ss_pred             CCC-CCCCHHHHHHHHHHcCCCcc---cEEEECCCchHhHHHHHHc-----CCeEEEEcCCCCCCcCCCCceEECCHHHH
Confidence            355 67889999999999999988   99999999 5999999999     89999988754    35799999999988


Q ss_pred             HHHHH
Q 040896          272 MSFLR  276 (288)
Q Consensus       272 ~~~l~  276 (288)
                      ..+++
T Consensus       229 ~~~~~  233 (240)
T 3qnm_A          229 MNLLE  233 (240)
T ss_dssp             HHHTC
T ss_pred             HHHHh
Confidence            87764

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=98.27  E-value=1.3e-06  Score=74.81  Aligned_cols=63  Identities=17%  Similarity=0.277  Sum_probs=54.4

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEe--CChhHHHHHHHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSL--RDPDEVMSFLRR  277 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~--~~~~~v~~~l~~  277 (288)
                      .+|+.+++.+.+.+        ++++|||+.||++|++.+     |++|+|+|+.+.  ..|++++  ++.++|.++|+.
T Consensus       193 ~~k~~~~k~~~~~~--------~~~~vGD~~nDi~~~~~A-----g~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~~  259 (280)
T 3skx_A          193 HEKAEKVKEVQQKY--------VTAMVGDGVNDAPALAQA-----DVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVEL  259 (280)
T ss_dssp             GGHHHHHHHHHTTS--------CEEEEECTTTTHHHHHHS-----SEEEECSCCSSSCCCSSSEECSSCCTHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcC--------CEEEEeCCchhHHHHHhC-----CceEEecCCcHHHHhhCCEEEeCCCHHHHHHHHHH
Confidence            38999999988764        679999999999999999     899999998653  5788888  688999998863

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=98.27  E-value=2e-06  Score=71.27  Aligned_cols=71  Identities=8%  Similarity=-0.010  Sum_probs=58.4

Q ss_pred             CCCHH---HHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCceEEEEecCC----------C---CccceE
Q 040896          201 DWDKG---RALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGYPIIVSSVP----------R---ETKALY  263 (288)
Q Consensus       201 ~~sKg---~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~~v~v~na~----------~---~~~A~~  263 (288)
                      .-++.   .+++. ++++|++++   ++++|||+. ||+.|.+.+     |+++++.|..          .   +..|++
T Consensus       152 KP~~~~~~~~l~~-~~~lgi~~~---~~~~vGD~~~~Di~~a~~a-----G~~~~~~~~~~~~~g~g~~~~~~~~~~ad~  222 (240)
T 3smv_A          152 KPNPNNFTYMIDA-LAKAGIEKK---DILHTAESLYHDHIPANDA-----GLVSAWIYRRHGKEGYGATHVPSRMPNVDF  222 (240)
T ss_dssp             TTSHHHHHHHHHH-HHHTTCCGG---GEEEEESCTTTTHHHHHHH-----TCEEEEECTTCC-------CCCSSCCCCSE
T ss_pred             CCCHHHHHHHHHH-HHhcCCCch---hEEEECCCchhhhHHHHHc-----CCeEEEEcCCCcccCCCCCCCCcCCCCCCE
Confidence            45666   56666 899999988   999999995 999999999     8998885532          1   258999


Q ss_pred             EeCChhHHHHHHHHHHH
Q 040896          264 SLRDPDEVMSFLRRLAR  280 (288)
Q Consensus       264 ~~~~~~~v~~~l~~~~~  280 (288)
                      ++++..++.++|++++.
T Consensus       223 v~~~~~el~~~l~~~l~  239 (240)
T 3smv_A          223 RFNSMGEMAEAHKQALK  239 (240)
T ss_dssp             EESSHHHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHhc
Confidence            99999999999988753

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=98.20  E-value=4.4e-07  Score=75.23  Aligned_cols=73  Identities=19%  Similarity=0.058  Sum_probs=59.4

Q ss_pred             eCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecC--CC---C-ccceEEeCChh
Q 040896          197 RPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSV--PR---E-TKALYSLRDPD  269 (288)
Q Consensus       197 ~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na--~~---~-~~A~~~~~~~~  269 (288)
                      .+. +..|+.+++.+++.+|++++   ++++|||+.||++|++.+     |+ ++.|.++  ..   + ..|++++++..
T Consensus       143 ~~~-~kp~~~~~~~~~~~l~~~~~---~~i~iGD~~~Di~~a~~a-----G~~~i~v~~g~~~~~~l~~~~ad~v~~~~~  213 (233)
T 3s6j_A          143 VSY-GKPDPDLFLAAAKKIGAPID---ECLVIGDAIWDMLAARRC-----KATGVGLLSGGYDIGELERAGALRVYEDPL  213 (233)
T ss_dssp             SSC-CTTSTHHHHHHHHHTTCCGG---GEEEEESSHHHHHHHHHT-----TCEEEEEGGGSCCHHHHHHTTCSEEESSHH
T ss_pred             CCC-CCCChHHHHHHHHHhCCCHH---HEEEEeCCHHhHHHHHHC-----CCEEEEEeCCCCchHhHHhcCCCEEECCHH
Confidence            356 77889999999999999987   999999999999999999     76 4555443  21   1 24899999999


Q ss_pred             HHHHHHHHH
Q 040896          270 EVMSFLRRL  278 (288)
Q Consensus       270 ~v~~~l~~~  278 (288)
                      ++.++|++.
T Consensus       214 el~~~l~~~  222 (233)
T 3s6j_A          214 DLLNHLDEI  222 (233)
T ss_dssp             HHHHTGGGT
T ss_pred             HHHHHHHHH
Confidence            998888654

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=98.18  E-value=6.4e-07  Score=76.33  Aligned_cols=75  Identities=9%  Similarity=-0.024  Sum_probs=61.2

Q ss_pred             eCCCCCCHHHHHHHHHHhcCCCC-CCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCC------------------
Q 040896          197 RPCIDWDKGRALEYLLDTFGFNN-ASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVP------------------  256 (288)
Q Consensus       197 ~~~~~~sKg~al~~l~~~~~~~~-~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~------------------  256 (288)
                      .+. +..|+.+++.+++++|+++ +   ++++|||+.||+.|.+.+     |+ ++.|..+.                  
T Consensus       164 ~~~-~kp~~~~~~~~~~~lgi~~~~---~~i~vGD~~~Di~~a~~a-----G~~~v~v~~g~~~~~~~~~~~~~~~~~~~  234 (277)
T 3iru_A          164 VVR-GRPFPDMALKVALELEVGHVN---GCIKVDDTLPGIEEGLRA-----GMWTVGVSCSGNEVGLDREDWQALSSDEQ  234 (277)
T ss_dssp             SSS-CTTSSHHHHHHHHHHTCSCGG---GEEEEESSHHHHHHHHHT-----TCEEEEECSSSTTTCCCHHHHHHSCHHHH
T ss_pred             cCC-CCCCHHHHHHHHHHcCCCCCc---cEEEEcCCHHHHHHHHHC-----CCeEEEEecCCcccccchhhhhhcchhhh
Confidence            566 7899999999999999998 8   999999999999999999     64 34444431                  


Q ss_pred             --------C--C-ccceEEeCChhHHHHHHHHHHH
Q 040896          257 --------R--E-TKALYSLRDPDEVMSFLRRLAR  280 (288)
Q Consensus       257 --------~--~-~~A~~~~~~~~~v~~~l~~~~~  280 (288)
                              .  + ..|++++++.+++.++|+++-.
T Consensus       235 ~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~  269 (277)
T 3iru_A          235 QSYRQHAEQRLFNAGAHYVIDSVADLETVITDVNR  269 (277)
T ss_dssp             HHHHHHHHHHHHHHTCSEEESSGGGTHHHHHHHHH
T ss_pred             hhhhhhhHHHHhhCCCCEEecCHHHHHHHHHHHHH
Confidence                    1  1 3589999999999999987644

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=98.17  E-value=9.7e-07  Score=73.85  Aligned_cols=72  Identities=19%  Similarity=0.320  Sum_probs=59.0

Q ss_pred             EEeCCCCCCHHHHHHHHHHhcCCC-CCCCceeEEEcCCcccHHHHHHHHhcCCce---EEEEecCCCC----ccceEEeC
Q 040896          195 EIRPCIDWDKGRALEYLLDTFGFN-NASDFLPLYIGDDKTDEDAFKVIRHMGRGY---PIIVSSVPRE----TKALYSLR  266 (288)
Q Consensus       195 eI~~~~~~sKg~al~~l~~~~~~~-~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~---~v~v~na~~~----~~A~~~~~  266 (288)
                      +..+. +..|+.+++.+++.+|++ ++   ++++|||+.||++|.+.+     |+   .|.++++..+    ..|++++.
T Consensus       160 ~~~~~-~kp~~~~~~~~~~~~g~~~~~---~~i~vGD~~~Di~~a~~a-----G~~~i~v~~g~~~~~~~~~~~ad~v~~  230 (240)
T 3sd7_A          160 NLDGT-RVNKNEVIQYVLDLCNVKDKD---KVIMVGDRKYDIIGAKKI-----GIDSIGVLYGYGSFEEISESEPTYIVE  230 (240)
T ss_dssp             CTTSC-CCCHHHHHHHHHHHHTCCCGG---GEEEEESSHHHHHHHHHH-----TCEEEEESSSSCCHHHHHHHCCSEEES
T ss_pred             cccCC-CCCCHHHHHHHHHHcCCCCCC---cEEEECCCHHHHHHHHHC-----CCCEEEEeCCCCCHHHHhhcCCCEEEC
Confidence            44566 789999999999999998 88   999999999999999999     76   4444544432    47999999


Q ss_pred             ChhHHHHHH
Q 040896          267 DPDEVMSFL  275 (288)
Q Consensus       267 ~~~~v~~~l  275 (288)
                      +.+++.++|
T Consensus       231 ~~~el~~~l  239 (240)
T 3sd7_A          231 NVESIKDIL  239 (240)
T ss_dssp             SSTTHHHHH
T ss_pred             CHHHHHHHh
Confidence            988887765

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=98.16  E-value=8.8e-07  Score=72.51  Aligned_cols=67  Identities=16%  Similarity=0.226  Sum_probs=54.8

Q ss_pred             CCCH--HHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEec---C-CCC-ccceEEeCChhHHHH
Q 040896          201 DWDK--GRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSS---V-PRE-TKALYSLRDPDEVMS  273 (288)
Q Consensus       201 ~~sK--g~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~n---a-~~~-~~A~~~~~~~~~v~~  273 (288)
                      +.+|  +.+++.+++.+|++++   ++++|||+.||++|.+.+     |+++++.|   . .+. ..|++++.+.+++.+
T Consensus       135 ~~~KP~~~~~~~~~~~~~~~~~---~~i~vGD~~~Di~~a~~a-----G~~~~~~~~~~~~~~~~~~a~~~~~~~~el~~  206 (209)
T 2hdo_A          135 PKRKPDPLPLLTALEKVNVAPQ---NALFIGDSVSDEQTAQAA-----NVDFGLAVWGMDPNADHQKVAHRFQKPLDILE  206 (209)
T ss_dssp             SCCTTSSHHHHHHHHHTTCCGG---GEEEEESSHHHHHHHHHH-----TCEEEEEGGGCCTTGGGSCCSEEESSGGGGGG
T ss_pred             CCCCCCcHHHHHHHHHcCCCcc---cEEEECCChhhHHHHHHc-----CCeEEEEcCCCCChhhhccCCEEeCCHHHHHH
Confidence            5688  9999999999999887   999999999999999999     88888755   2 221 238999998887765


Q ss_pred             HH
Q 040896          274 FL  275 (288)
Q Consensus       274 ~l  275 (288)
                      +|
T Consensus       207 ~l  208 (209)
T 2hdo_A          207 LF  208 (209)
T ss_dssp             GC
T ss_pred             hh
Confidence            43

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.16  E-value=2.4e-06  Score=69.30  Aligned_cols=57  Identities=14%  Similarity=0.167  Sum_probs=43.9

Q ss_pred             CcEEEEEecCCccccCcC-------------------CCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCC-hhhHhhhc
Q 040896           20 KKIVVFLDYDGTLSPIVE-------------------DPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRC-LDKVSRFV   76 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~-------------------~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~-~~~l~~~~   76 (288)
                      ..++|+||+||||++...                   ......+.+.+.++|++|++.+ +++|+||++ ...+...+
T Consensus        26 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l  103 (187)
T 2wm8_A           26 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLL  103 (187)
T ss_dssp             SCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHH
T ss_pred             ccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHH
Confidence            468999999999994210                   0123467889999999999985 999999999 67666654

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=98.15  E-value=3.9e-06  Score=69.59  Aligned_cols=71  Identities=20%  Similarity=0.311  Sum_probs=58.9

Q ss_pred             CCCCCCHHHHHHHHHHhcC-CCCCCCceeEEEcCCc-ccHHHHHHHHhcCCce-EEEEecC--CC--CccceEEeCChhH
Q 040896          198 PCIDWDKGRALEYLLDTFG-FNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGY-PIIVSSV--PR--ETKALYSLRDPDE  270 (288)
Q Consensus       198 ~~~~~sKg~al~~l~~~~~-~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~-~v~v~na--~~--~~~A~~~~~~~~~  270 (288)
                      .. +..|+.+++.+++++| ++++   ++++|||+. ||++|.+.+     |+ ++.+.++  .+  +..|++++.+.++
T Consensus       155 ~~-~kp~~~~~~~~~~~~g~~~~~---~~i~vGD~~~~Di~~a~~a-----G~~~i~~~~~~~~~~~~~~ad~v~~~~~e  225 (238)
T 3ed5_A          155 GF-QKPMKEYFNYVFERIPQFSAE---HTLIIGDSLTADIKGGQLA-----GLDTCWMNPDMKPNVPEIIPTYEIRKLEE  225 (238)
T ss_dssp             TS-CTTCHHHHHHHHHTSTTCCGG---GEEEEESCTTTTHHHHHHT-----TCEEEEECTTCCCCTTCCCCSEEESSGGG
T ss_pred             CC-CCCChHHHHHHHHHcCCCChh---HeEEECCCcHHHHHHHHHC-----CCEEEEECCCCCCCcccCCCCeEECCHHH
Confidence            45 6678999999999999 9987   999999997 999999999     77 4556554  22  3579999999999


Q ss_pred             HHHHHHH
Q 040896          271 VMSFLRR  277 (288)
Q Consensus       271 v~~~l~~  277 (288)
                      +.++|++
T Consensus       226 l~~~l~~  232 (238)
T 3ed5_A          226 LYHILNI  232 (238)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHHh
Confidence            9888754

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=98.14  E-value=3.5e-06  Score=71.30  Aligned_cols=70  Identities=14%  Similarity=-0.006  Sum_probs=58.9

Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceE-EEEecCCC----------CccceEEeCC
Q 040896          199 CIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYP-IIVSSVPR----------ETKALYSLRD  267 (288)
Q Consensus       199 ~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~-v~v~na~~----------~~~A~~~~~~  267 (288)
                      . +..|..+++.+++.+|++++   ++++|||+.||+.|.+.+     |+. +.+.++..          +..|++++.+
T Consensus       166 ~-~Kp~~~~~~~~~~~lgi~~~---~~i~iGD~~~Di~~a~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~  236 (259)
T 4eek_A          166 R-GKPHPDLYTFAAQQLGILPE---RCVVIEDSVTGGAAGLAA-----GATLWGLLVPGHPHPDGAAALSRLGAARVLTS  236 (259)
T ss_dssp             C-CTTSSHHHHHHHHHTTCCGG---GEEEEESSHHHHHHHHHH-----TCEEEEECCTTSCCSSCHHHHHHHTCSEEECS
T ss_pred             C-CCCChHHHHHHHHHcCCCHH---HEEEEcCCHHHHHHHHHC-----CCEEEEEccCCCcccccHHHHHhcCcchhhCC
Confidence            5 66789999999999999987   999999999999999999     776 66655421          1358999999


Q ss_pred             hhHHHHHHHH
Q 040896          268 PDEVMSFLRR  277 (288)
Q Consensus       268 ~~~v~~~l~~  277 (288)
                      ..++.++|++
T Consensus       237 l~el~~~l~~  246 (259)
T 4eek_A          237 HAELRAALAE  246 (259)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999998875

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.14  E-value=2.4e-06  Score=70.46  Aligned_cols=66  Identities=15%  Similarity=0.145  Sum_probs=53.1

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCceEEEE-------ecCCC--Cc-cceEEeCChhH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGYPIIV-------SSVPR--ET-KALYSLRDPDE  270 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~~v~v-------~na~~--~~-~A~~~~~~~~~  270 (288)
                      -.|+.+++.+++++|++++   ++++|||+. ||++|.+.+     |+++++       +++..  .. .+++++++..+
T Consensus       157 kpk~~~~~~~~~~lgi~~~---~~i~iGD~~~~Di~~a~~a-----G~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~e  228 (234)
T 3ddh_A          157 DKTEKEYLRLLSILQIAPS---ELLMVGNSFKSDIQPVLSL-----GGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDD  228 (234)
T ss_dssp             CCSHHHHHHHHHHHTCCGG---GEEEEESCCCCCCHHHHHH-----TCEEEECCCCTTCCCC---CCCCTTEEECSSGGG
T ss_pred             CCCHHHHHHHHHHhCCCcc---eEEEECCCcHHHhHHHHHC-----CCeEEEecCCcccccCCcccccCCCceecccHHH
Confidence            3799999999999999987   999999996 999999999     886555       23322  23 34899999998


Q ss_pred             HHHHH
Q 040896          271 VMSFL  275 (288)
Q Consensus       271 v~~~l  275 (288)
                      +.++|
T Consensus       229 l~~~l  233 (234)
T 3ddh_A          229 LLSLL  233 (234)
T ss_dssp             HHHHC
T ss_pred             HHHhc
Confidence            88765

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=98.09  E-value=5.4e-06  Score=70.12  Aligned_cols=78  Identities=10%  Similarity=0.143  Sum_probs=63.0

Q ss_pred             eCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecC---------------------
Q 040896          197 RPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSV---------------------  255 (288)
Q Consensus       197 ~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na---------------------  255 (288)
                      ... +..|..+++.+++++|++++   ++++|||+.||+.|.+.+     |+.+++.|.                     
T Consensus       143 ~~~-~Kp~~~~~~~~~~~~~~~~~---~~~~vGD~~~Di~~a~~a-----G~~~~~~~~~~~~~~~~~l~~g~~~~~~~~  213 (253)
T 1qq5_A          143 KRV-FKPHPDSYALVEEVLGVTPA---EVLFVSSNGFDVGGAKNF-----GFSVARVARLSQEALARELVSGTIAPLTMF  213 (253)
T ss_dssp             GTC-CTTSHHHHHHHHHHHCCCGG---GEEEEESCHHHHHHHHHH-----TCEEEEECCSCHHHHHHHTTSSSCCHHHHH
T ss_pred             cCC-CCCCHHHHHHHHHHcCCCHH---HEEEEeCChhhHHHHHHC-----CCEEEEECCcccchhhhhcccccccccccc
Confidence            345 66888999999999999987   999999999999999999     888777665                     


Q ss_pred             ------CC--CccceEEeCChhHHHHHHHHHHHHhh
Q 040896          256 ------PR--ETKALYSLRDPDEVMSFLRRLARWKK  283 (288)
Q Consensus       256 ------~~--~~~A~~~~~~~~~v~~~l~~~~~~~~  283 (288)
                            .+  +..+++++++..++.++|+++.+.+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~  249 (253)
T 1qq5_A          214 KALRMREETYAEAPDFVVPALGDLPRLVRGMAGAHL  249 (253)
T ss_dssp             HHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC----
T ss_pred             cccccccCCCCCCCCeeeCCHHHHHHHHHHhccccc
Confidence                  22  24689999999999999988765544

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=98.06  E-value=1.9e-06  Score=70.03  Aligned_cols=66  Identities=12%  Similarity=0.023  Sum_probs=54.7

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCC--C--CccceEEeCChhHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVP--R--ETKALYSLRDPDEVMSF  274 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~--~--~~~A~~~~~~~~~v~~~  274 (288)
                      +..|+.+++.+++++|++++   ++++|||+.||++|.+.+     |+.+++.+..  .  +..|++++++.+++.++
T Consensus       144 ~kp~~~~~~~~~~~~~~~~~---~~~~iGD~~~Di~~a~~a-----G~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~  213 (214)
T 3e58_A          144 SKPNPEIYLTALKQLNVQAS---RALIIEDSEKGIAAGVAA-----DVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDL  213 (214)
T ss_dssp             CTTSSHHHHHHHHHHTCCGG---GEEEEECSHHHHHHHHHT-----TCEEEEECCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred             CCCChHHHHHHHHHcCCChH---HeEEEeccHhhHHHHHHC-----CCEEEEECCCCccchhccHHHHHHHHHHHHhh
Confidence            56779999999999999987   999999999999999999     8876665542  2  36899999988776543

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=97.98  E-value=6.9e-06  Score=70.03  Aligned_cols=78  Identities=14%  Similarity=0.123  Sum_probs=63.6

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCceEEEEecCCC--C------ccceEEeCChhHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGYPIIVSSVPR--E------TKALYSLRDPDEV  271 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~~v~v~na~~--~------~~A~~~~~~~~~v  271 (288)
                      +-.|...++.+++.+|++++   ++++|||+. ||+.|.+.+     |+.+++.|...  +      ..|++++.+..++
T Consensus       160 ~Kp~~~~~~~~~~~~g~~~~---~~~~vGD~~~~Di~~a~~a-----G~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el  231 (263)
T 3k1z_A          160 PKPDPRIFQEALRLAHMEPV---VAAHVGDNYLCDYQGPRAV-----GMHSFLVVGPQALDPVVRDSVPKEHILPSLAHL  231 (263)
T ss_dssp             CTTSHHHHHHHHHHHTCCGG---GEEEEESCHHHHTHHHHTT-----TCEEEEECCSSCCCHHHHHHSCGGGEESSGGGH
T ss_pred             CCCCHHHHHHHHHHcCCCHH---HEEEECCCcHHHHHHHHHC-----CCEEEEEcCCCCCchhhcccCCCceEeCCHHHH
Confidence            45778999999999999987   999999996 999999998     88888877643  2      2689999999999


Q ss_pred             HHHHHHHHHHhhhCC
Q 040896          272 MSFLRRLARWKKSLG  286 (288)
Q Consensus       272 ~~~l~~~~~~~~~~~  286 (288)
                      .++|+++...+.++.
T Consensus       232 ~~~l~~~~~~~~~~~  246 (263)
T 3k1z_A          232 LPALDCLEGSAENLY  246 (263)
T ss_dssp             HHHHHHHHHC-----
T ss_pred             HHHHHHHHhcCCCCc
Confidence            999999988776654

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=97.94  E-value=8.4e-06  Score=67.61  Aligned_cols=70  Identities=13%  Similarity=0.235  Sum_probs=56.0

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEec----CCC--CccceEEeCChhHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSS----VPR--ETKALYSLRDPDEVMSF  274 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~n----a~~--~~~A~~~~~~~~~v~~~  274 (288)
                      +-.|..+++.+++.+|++++   ++++|||+.||+.|.+.+     |+.+++-+    ..+  +..|++++++..++..+
T Consensus       150 ~Kp~~~~~~~~~~~~~~~~~---~~~~iGD~~~Di~~a~~a-----G~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~  221 (232)
T 1zrn_A          150 YKPDNRVYELAEQALGLDRS---AILFVASNAWDATGARYF-----GFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL  221 (232)
T ss_dssp             CTTSHHHHHHHHHHHTSCGG---GEEEEESCHHHHHHHHHH-----TCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred             CCCCHHHHHHHHHHcCCCcc---cEEEEeCCHHHHHHHHHc-----CCEEEEEcCCCCCccccCCCCCEEECCHHHHHHH
Confidence            56788899999999999887   999999999999999999     78766632    222  24689999999999888


Q ss_pred             HHHH
Q 040896          275 LRRL  278 (288)
Q Consensus       275 l~~~  278 (288)
                      |++.
T Consensus       222 l~~~  225 (232)
T 1zrn_A          222 FETA  225 (232)
T ss_dssp             C---
T ss_pred             HHhh
Confidence            7665

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=97.92  E-value=2.2e-06  Score=72.14  Aligned_cols=69  Identities=16%  Similarity=0.062  Sum_probs=55.1

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCC--CCCceeEEEcCCcccHHHHHHHHhcCCceE---EEEecCCC--CccceEEeCChhH
Q 040896          198 PCIDWDKGRALEYLLDTFGFNN--ASDFLPLYIGDDKTDEDAFKVIRHMGRGYP---IIVSSVPR--ETKALYSLRDPDE  270 (288)
Q Consensus       198 ~~~~~sKg~al~~l~~~~~~~~--~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~---v~v~na~~--~~~A~~~~~~~~~  270 (288)
                      .. +..|..+++.+++++|+++  +   ++++|||+.||++|.+.+     |+.   |.++|+.+  +..|++++.+.++
T Consensus       168 ~~-~Kp~~~~~~~~~~~lgi~~~~~---~~i~iGD~~~Di~~a~~a-----G~~~i~v~~~~~~~~~~~~ad~v~~sl~e  238 (250)
T 3l5k_A          168 QH-GKPDPDIFLACAKRFSPPPAME---KCLVFEDAPNGVEAALAA-----GMQVVMVPDGNLSRDLTTKATLVLNSLQD  238 (250)
T ss_dssp             CS-CTTSTHHHHHHHHTSSSCCCGG---GEEEEESSHHHHHHHHHT-----TCEEEECCCTTSCGGGSTTSSEECSCGGG
T ss_pred             cC-CCCChHHHHHHHHHcCCCCCcc---eEEEEeCCHHHHHHHHHc-----CCEEEEEcCCCCchhhcccccEeecCHHH
Confidence            44 5678899999999999986  6   999999999999999999     743   33455543  3689999999887


Q ss_pred             HHHHH
Q 040896          271 VMSFL  275 (288)
Q Consensus       271 v~~~l  275 (288)
                      +...|
T Consensus       239 l~~~l  243 (250)
T 3l5k_A          239 FQPEL  243 (250)
T ss_dssp             CCGGG
T ss_pred             hhHHH
Confidence            65544

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=97.89  E-value=3.8e-06  Score=72.23  Aligned_cols=64  Identities=13%  Similarity=0.036  Sum_probs=51.8

Q ss_pred             CCCCCCHHHHHHHHHHhcCC-------CCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEE---ecCCC---CccceEE
Q 040896          198 PCIDWDKGRALEYLLDTFGF-------NNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV---SSVPR---ETKALYS  264 (288)
Q Consensus       198 ~~~~~sKg~al~~l~~~~~~-------~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v---~na~~---~~~A~~~  264 (288)
                      +. +..|+.+++.+++++|+       +++   ++++|||+.||++|++.+     |+++++   +++..   +..|+++
T Consensus       167 ~~-~kp~~~~~~~~~~~lgi~~~~~~~~~~---~~i~~GDs~nDi~~a~~A-----G~~~i~v~~~~~~~~~~~~~ad~v  237 (275)
T 2qlt_A          167 KQ-GKPHPEPYLKGRNGLGFPINEQDPSKS---KVVVFEDAPAGIAAGKAA-----GCKIVGIATTFDLDFLKEKGCDII  237 (275)
T ss_dssp             SS-CTTSSHHHHHHHHHTTCCCCSSCGGGS---CEEEEESSHHHHHHHHHT-----TCEEEEESSSSCHHHHTTSSCSEE
T ss_pred             CC-CCCChHHHHHHHHHcCCCccccCCCcc---eEEEEeCCHHHHHHHHHc-----CCEEEEECCCCCHHHHhhCCCCEE
Confidence            56 77899999999999999       877   999999999999999999     777655   33321   2368999


Q ss_pred             eCChhH
Q 040896          265 LRDPDE  270 (288)
Q Consensus       265 ~~~~~~  270 (288)
                      +.+.++
T Consensus       238 ~~~~~e  243 (275)
T 2qlt_A          238 VKNHES  243 (275)
T ss_dssp             ESSGGG
T ss_pred             ECChHH
Confidence            887655

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=97.88  E-value=6e-06  Score=62.65  Aligned_cols=50  Identities=16%  Similarity=0.010  Sum_probs=41.0

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      .|++++|+||||..      ...+.+.+.++|++|++.+ +++++|+++...+...+
T Consensus         2 ~k~i~~D~DgtL~~------~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l   52 (137)
T 2pr7_A            2 MRGLIVDYAGVLDG------TDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPI   52 (137)
T ss_dssp             CCEEEECSTTTTSS------CHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHH
T ss_pred             CcEEEEeccceecC------CCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence            47899999999954      3456788999999999985 89999999887765544

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=97.86  E-value=3.7e-05  Score=62.38  Aligned_cols=66  Identities=18%  Similarity=0.269  Sum_probs=52.8

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEE----ecCCC--CccceEEeCChhHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV----SSVPR--ETKALYSLRDPDEVMSFLR  276 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v----~na~~--~~~A~~~~~~~~~v~~~l~  276 (288)
                      .|..+++.+++.+|  ++   ++++|||+.||+.|.+.+     |+.+++    +++.+  ...|++++++..++.++|.
T Consensus       129 p~~~~~~~~~~~~~--~~---~~~~vGD~~~Di~~a~~a-----G~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~  198 (201)
T 2w43_A          129 PSPKVYKYFLDSIG--AK---EAFLVSSNAFDVIGAKNA-----GMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWIL  198 (201)
T ss_dssp             TCHHHHHHHHHHHT--CS---CCEEEESCHHHHHHHHHT-----TCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcC--CC---cEEEEeCCHHHhHHHHHC-----CCEEEEECCCCCCccccCCCCCEEECCHHHHHHHHH
Confidence            45999999999999  55   999999999999999998     777555    33222  2468899999999988876


Q ss_pred             HH
Q 040896          277 RL  278 (288)
Q Consensus       277 ~~  278 (288)
                      ++
T Consensus       199 ~~  200 (201)
T 2w43_A          199 RY  200 (201)
T ss_dssp             HH
T ss_pred             hc
Confidence            53

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=97.84  E-value=1.3e-05  Score=81.38  Aligned_cols=69  Identities=20%  Similarity=0.277  Sum_probs=56.6

Q ss_pred             eEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeC--C
Q 040896          192 KVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLR--D  267 (288)
Q Consensus       192 ~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~  267 (288)
                      .+.++.|.   +|...++.+.++ |   +   .|+++||+.||.+||+.+     +.||+|+++.+  +..|++++.  +
T Consensus       676 v~~r~~P~---~K~~~v~~l~~~-g---~---~v~~~GDG~ND~~alk~A-----dvgiamg~g~~~ak~aAd~vl~~~~  740 (995)
T 3ar4_A          676 CFARVEPS---HKSKIVEYLQSY-D---E---ITAMTGDGVNDAPALKKA-----EIGIAMGSGTAVAKTASEMVLADDN  740 (995)
T ss_dssp             EEESCCSS---HHHHHHHHHHTT-T---C---CEEEEECSGGGHHHHHHS-----TEEEEETTSCHHHHHTCSEEETTCC
T ss_pred             EEEEeCHH---HHHHHHHHHHHC-C---C---EEEEEcCCchhHHHHHHC-----CeEEEeCCCCHHHHHhCCEEECCCC
Confidence            45666677   999999999886 3   4   899999999999999999     79999998765  358999985  4


Q ss_pred             hhHHHHHH
Q 040896          268 PDEVMSFL  275 (288)
Q Consensus       268 ~~~v~~~l  275 (288)
                      ..++.+.+
T Consensus       741 ~~~i~~~i  748 (995)
T 3ar4_A          741 FSTIVAAV  748 (995)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            66666655

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=97.83  E-value=1.3e-05  Score=73.22  Aligned_cols=66  Identities=26%  Similarity=0.233  Sum_probs=56.2

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeC--ChhHHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLR--DPDEVMSFL  275 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~--~~~~v~~~l  275 (288)
                      +..|..+++.+++.+|++++   ++++|||+.||++|++.+     |+++++ |+.+.  ..|+++++  +.+++..+|
T Consensus       321 ~kpk~~~~~~~~~~~gi~~~---~~i~vGD~~~Di~~a~~a-----G~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l  390 (415)
T 3p96_A          321 RAGKATALREFAQRAGVPMA---QTVAVGDGANDIDMLAAA-----GLGIAF-NAKPALREVADASLSHPYLDTVLFLL  390 (415)
T ss_dssp             HHHHHHHHHHHHHHHTCCGG---GEEEEECSGGGHHHHHHS-----SEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHT
T ss_pred             CcchHHHHHHHHHHcCcChh---hEEEEECCHHHHHHHHHC-----CCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHh
Confidence            34789999999999999987   999999999999999999     899999 77653  57888876  466777766

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=97.83  E-value=2e-05  Score=65.99  Aligned_cols=71  Identities=13%  Similarity=0.051  Sum_probs=56.8

Q ss_pred             eCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecC--CCC----ccceEEeCChh
Q 040896          197 RPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSV--PRE----TKALYSLRDPD  269 (288)
Q Consensus       197 ~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na--~~~----~~A~~~~~~~~  269 (288)
                      .+. +..|..++..+++++|++++   ++++|||+.||+.|.+.+     |+ +|.+.++  ...    ..|++++.+..
T Consensus       161 ~~~-~Kp~p~~~~~~~~~l~~~~~---~~~~vGDs~~Di~~a~~a-----G~~~v~v~~~~~~~~~~~~~~a~~~~~~~~  231 (240)
T 2hi0_A          161 GIR-RKPAPDMTSECVKVLGVPRD---KCVYIGDSEIDIQTARNS-----EMDEIAVNWGFRSVPFLQKHGATVIVDTAE  231 (240)
T ss_dssp             TSC-CTTSSHHHHHHHHHHTCCGG---GEEEEESSHHHHHHHHHT-----TCEEEEESSSSSCHHHHHHTTCCCEECSHH
T ss_pred             CCC-CCCCHHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHC-----CCeEEEECCCCCchhHHHhcCCCEEECCHH
Confidence            455 77899999999999999987   999999999999999999     66 4555443  211    35889999988


Q ss_pred             HHHHHHH
Q 040896          270 EVMSFLR  276 (288)
Q Consensus       270 ~v~~~l~  276 (288)
                      ++.++|.
T Consensus       232 el~~~l~  238 (240)
T 2hi0_A          232 KLEEAIL  238 (240)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhc
Confidence            8877653

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=97.83  E-value=2.2e-05  Score=64.97  Aligned_cols=69  Identities=16%  Similarity=0.181  Sum_probs=57.0

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceE-EEEecCC--CC-ccceEEeCChhHHHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYP-IIVSSVP--RE-TKALYSLRDPDEVMSFLR  276 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~-v~v~na~--~~-~~A~~~~~~~~~v~~~l~  276 (288)
                      +-.|..+++.+++.+|++++   ++++|||+.||++|.+.+     |+. |.+.++.  .. ..|++++++..++.++|.
T Consensus       138 ~Kp~~~~~~~~~~~~~~~~~---~~~~vGD~~~Di~~a~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~~el~~~l~  209 (222)
T 2nyv_A          138 KKPSPTPVLKTLEILGEEPE---KALIVGDTDADIEAGKRA-----GTKTALALWGYVKLNSQIPDFTLSRPSDLVKLMD  209 (222)
T ss_dssp             TCCTTHHHHHHHHHHTCCGG---GEEEEESSHHHHHHHHHH-----TCEEEEETTSSCSCCCCCCSEEESSTTHHHHHHH
T ss_pred             CCCChHHHHHHHHHhCCCch---hEEEECCCHHHHHHHHHC-----CCeEEEEcCCCCCccccCCCEEECCHHHHHHHHH
Confidence            34889999999999999887   999999999999999999     765 7776542  22 568899999999888775


Q ss_pred             H
Q 040896          277 R  277 (288)
Q Consensus       277 ~  277 (288)
                      +
T Consensus       210 ~  210 (222)
T 2nyv_A          210 N  210 (222)
T ss_dssp             T
T ss_pred             H
Confidence            4

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=97.80  E-value=1.2e-05  Score=69.42  Aligned_cols=51  Identities=16%  Similarity=0.103  Sum_probs=41.5

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcC---CChhhHhhhc
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSG---RCLDKVSRFV   76 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TG---R~~~~l~~~~   76 (288)
                      ..++|+||+||||++.     . .+.+.+.++|++|++.+ .++++|+   |+...+.+.+
T Consensus        13 ~~k~i~~D~DGtL~~~-----~-~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l   67 (284)
T 2hx1_A           13 KYKCIFFDAFGVLKTY-----N-GLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSY   67 (284)
T ss_dssp             GCSEEEECSBTTTEET-----T-EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHH
T ss_pred             cCCEEEEcCcCCcCcC-----C-eeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHH
Confidence            4689999999999982     2 35578999999999985 8999995   8877766653

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=97.75  E-value=2.4e-05  Score=64.16  Aligned_cols=69  Identities=22%  Similarity=0.250  Sum_probs=55.3

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce---EEEEecCCC----CccceEEeCChhH
Q 040896          198 PCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY---PIIVSSVPR----ETKALYSLRDPDE  270 (288)
Q Consensus       198 ~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~---~v~v~na~~----~~~A~~~~~~~~~  270 (288)
                      +. +-.|....+.+++++|++++   ++++||||.||+.|.+.+     |+   +|.++++..    +..|++++++.++
T Consensus       134 ~~-~Kp~p~~~~~~~~~lg~~p~---~~~~vgDs~~Di~~a~~a-----G~~~i~v~~~~~~~~~l~~~~a~~v~~~~~e  204 (210)
T 2ah5_A          134 PE-APHKADVIHQALQTHQLAPE---QAIIIGDTKFDMLGARET-----GIQKLAITWGFGEQADLLNYQPDYIAHKPLE  204 (210)
T ss_dssp             SS-CCSHHHHHHHHHHHTTCCGG---GEEEEESSHHHHHHHHHH-----TCEEEEESSSSSCHHHHHTTCCSEEESSTTH
T ss_pred             CC-CCCChHHHHHHHHHcCCCcc---cEEEECCCHHHHHHHHHC-----CCcEEEEcCCCCCHHHHHhCCCCEEECCHHH
Confidence            55 67999999999999999988   999999999999999999     65   344444432    1358899999888


Q ss_pred             HHHHH
Q 040896          271 VMSFL  275 (288)
Q Consensus       271 v~~~l  275 (288)
                      +.++|
T Consensus       205 l~~~l  209 (210)
T 2ah5_A          205 VLAYF  209 (210)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            76643

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=97.73  E-value=4.5e-05  Score=63.67  Aligned_cols=73  Identities=16%  Similarity=0.216  Sum_probs=57.0

Q ss_pred             eCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCceE-EEEecCC--CC-----ccceEEeCC
Q 040896          197 RPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGYP-IIVSSVP--RE-----TKALYSLRD  267 (288)
Q Consensus       197 ~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~~-v~v~na~--~~-----~~A~~~~~~  267 (288)
                      ... +..|..+++.+++.+|++++   ++++|||+. ||+.|.+.+     |+. +.+..+.  ..     ..|++++.+
T Consensus       146 ~~~-~Kp~~~~~~~~~~~~g~~~~---~~i~iGD~~~~Di~~a~~a-----G~~~~~v~~g~~~~~~~~~~~~~~~~i~~  216 (241)
T 2hoq_A          146 EGV-KKPHPKIFKKALKAFNVKPE---EALMVGDRLYSDIYGAKRV-----GMKTVWFRYGKHSERELEYRKYADYEIDN  216 (241)
T ss_dssp             GTC-CTTCHHHHHHHHHHHTCCGG---GEEEEESCTTTTHHHHHHT-----TCEEEEECCSCCCHHHHTTGGGCSEEESS
T ss_pred             CCC-CCCCHHHHHHHHHHcCCCcc---cEEEECCCchHhHHHHHHC-----CCEEEEECCCCCCcccccccCCCCEEECC
Confidence            345 56778999999999999987   999999998 999999999     765 3443332  11     268899999


Q ss_pred             hhHHHHHHHHH
Q 040896          268 PDEVMSFLRRL  278 (288)
Q Consensus       268 ~~~v~~~l~~~  278 (288)
                      ..++.++|+++
T Consensus       217 ~~el~~~l~~~  227 (241)
T 2hoq_A          217 LESLLEVLARE  227 (241)
T ss_dssp             TTHHHHHHHHC
T ss_pred             HHHHHHHHHHH
Confidence            99998887643

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=97.70  E-value=2.7e-05  Score=64.95  Aligned_cols=71  Identities=14%  Similarity=0.187  Sum_probs=55.8

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEE-EE--ecCCC--Cccc-eEEeCChhHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPI-IV--SSVPR--ETKA-LYSLRDPDEVMSF  274 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v-~v--~na~~--~~~A-~~~~~~~~~v~~~  274 (288)
                      +-.|..+++.+++.+|++++   ++++|||+.||+.|.+.+     |+.+ .+  ++..+  +..| ++++++..++..+
T Consensus       160 ~Kp~~~~~~~~~~~~~~~~~---~~~~iGD~~~Di~~a~~a-----G~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~  231 (240)
T 2no4_A          160 YKPDPRIYQFACDRLGVNPN---EVCFVSSNAWDLGGAGKF-----GFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPL  231 (240)
T ss_dssp             CTTSHHHHHHHHHHHTCCGG---GEEEEESCHHHHHHHHHH-----TCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCcc---cEEEEeCCHHHHHHHHHC-----CCEEEEECCCCCCCcccCCCCceeeCCHHHHHHH
Confidence            56788899999999999987   999999999999999999     7553 33  33322  2357 8999999999888


Q ss_pred             HHHHH
Q 040896          275 LRRLA  279 (288)
Q Consensus       275 l~~~~  279 (288)
                      |+++.
T Consensus       232 l~~~~  236 (240)
T 2no4_A          232 LAKNV  236 (240)
T ss_dssp             HCC--
T ss_pred             HHHhh
Confidence            87655

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=97.70  E-value=3.8e-05  Score=78.10  Aligned_cols=62  Identities=21%  Similarity=0.138  Sum_probs=51.4

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEe-cCCC--CccceEEeCC--hhHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVS-SVPR--ETKALYSLRD--PDEVMSFLR  276 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~-na~~--~~~A~~~~~~--~~~v~~~l~  276 (288)
                      .|...++.+.+. |   .   .|+++||+.||.+||+.+     +.||+|| |+.+  +..|++++.+  .+++.+.|+
T Consensus       702 ~K~~iV~~lq~~-g---~---~V~~iGDG~ND~paLk~A-----dvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~  768 (1028)
T 2zxe_A          702 QKLIIVEGCQRQ-G---A---IVAVTGDGVNDSPALKKA-----DIGVAMGISGSDVSKQAADMILLDDNFASIVTGVE  768 (1028)
T ss_dssp             HHHHHHHHHHHT-T---C---CEEEEECSGGGHHHHHHS-----SEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHH
T ss_pred             HHHHHHHHHHhC-C---C---EEEEEcCCcchHHHHHhC-----CceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHH
Confidence            799999998875 3   3   899999999999999999     8999999 6866  3589999864  667777664

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=97.68  E-value=2.6e-05  Score=78.09  Aligned_cols=69  Identities=22%  Similarity=0.212  Sum_probs=56.0

Q ss_pred             eEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCC--
Q 040896          192 KVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRD--  267 (288)
Q Consensus       192 ~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~--  267 (288)
                      .+.++.|.   +|...++.+.++ |   +   .|+++||+.||.+||+.+     +.||+|+++.+  +..|++++.+  
T Consensus       606 V~arv~P~---~K~~iV~~Lq~~-g---~---~Vam~GDGvNDapaLk~A-----dvGIAmg~gtd~ak~aADiVl~~~~  670 (920)
T 1mhs_A          606 GFAEVFPQ---HKYNVVEILQQR-G---Y---LVAMTGDGVNDAPSLKKA-----DTGIAVEGSSDAARSAADIVFLAPG  670 (920)
T ss_dssp             CEESCCST---HHHHHHHHHHTT-T---C---CCEECCCCGGGHHHHHHS-----SEEEEETTSCHHHHHSSSEEESSCC
T ss_pred             EEEEeCHH---HHHHHHHHHHhC-C---C---eEEEEcCCcccHHHHHhC-----CcCcccccccHHHHHhcCeEEcCCC
Confidence            47778887   999999999875 3   4   899999999999999999     79999998765  3589999853  


Q ss_pred             hhHHHHHH
Q 040896          268 PDEVMSFL  275 (288)
Q Consensus       268 ~~~v~~~l  275 (288)
                      .+.+.+.+
T Consensus       671 ~~~I~~ai  678 (920)
T 1mhs_A          671 LGAIIDAL  678 (920)
T ss_dssp             SHHHHHHH
T ss_pred             HHHHHHHH
Confidence            44555544

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=97.64  E-value=4.2e-05  Score=61.16  Aligned_cols=49  Identities=10%  Similarity=0.004  Sum_probs=34.7

Q ss_pred             CCcEEEEEecCCccccCcCC--C---CCCCCCHHHHHHHHHHhhcC-CEEEEcCC
Q 040896           19 GKKIVVFLDYDGTLSPIVED--P---DKAFMSDTMRMAVHEVAHFF-PTAIVSGR   67 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~--~---~~~~i~~~~~~aL~~L~~~~-~v~i~TGR   67 (288)
                      ...|+|++|+||||++....  +   .-..++-....+|+.|++.+ .++|+||+
T Consensus         7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~~~L~~Lk~~Gi~~~I~Tg~   61 (168)
T 3ewi_A            7 KEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDAIGISLLKKSGIEVRLISER   61 (168)
T ss_dssp             CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             hcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcHHHHHHHHHCCCEEEEEeCc
Confidence            46799999999999983211  0   01112333456899999995 89999999

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=97.58  E-value=4.1e-05  Score=63.45  Aligned_cols=64  Identities=16%  Similarity=0.118  Sum_probs=41.3

Q ss_pred             hhHHHHHHhh-cCCcEEEEEecCCccccCcCC---------CC--------------------CCCCCHHHHHHHHHHhh
Q 040896            8 DTFDRMVAAA-KGKKIVVFLDYDGTLSPIVED---------PD--------------------KAFMSDTMRMAVHEVAH   57 (288)
Q Consensus         8 ~~~~~~~~~~-~~~~~li~~DlDGTL~~~~~~---------~~--------------------~~~i~~~~~~aL~~L~~   57 (288)
                      ..++++.... ....++|+||+||||++....         +.                    ...+.+.+.++|++|++
T Consensus        23 ~~~~~i~~~~~~~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~  102 (211)
T 2b82_A           23 VSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR  102 (211)
T ss_dssp             ECHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH
T ss_pred             eeHhhHhhhcccCCCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHH
Confidence            3455555333 335799999999999983210         00                    00123467888888888


Q ss_pred             cC-CEEEEcCCChhh
Q 040896           58 FF-PTAIVSGRCLDK   71 (288)
Q Consensus        58 ~~-~v~i~TGR~~~~   71 (288)
                      .+ +++|+|+|+...
T Consensus       103 ~G~~l~ivTn~~~~~  117 (211)
T 2b82_A          103 RGDAIFFVTGRSPTK  117 (211)
T ss_dssp             HTCEEEEEECSCCCS
T ss_pred             CCCEEEEEcCCcHHH
Confidence            75 888999987543

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=97.58  E-value=0.00011  Score=61.57  Aligned_cols=69  Identities=17%  Similarity=0.191  Sum_probs=54.8

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCceEEEE-ecCC-------C---CccceE-EeCChh
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGYPIIV-SSVP-------R---ETKALY-SLRDPD  269 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~~v~v-~na~-------~---~~~A~~-~~~~~~  269 (288)
                      .++.+++.+++++|++++   ++++|||+. ||+.|.+.+     |+.++. ..+.       .   ...+++ ++++..
T Consensus       163 p~~~~~~~~~~~l~~~~~---~~i~iGD~~~~Di~~a~~a-----G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~  234 (251)
T 2pke_A          163 KDPQTYARVLSEFDLPAE---RFVMIGNSLRSDVEPVLAI-----GGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPS  234 (251)
T ss_dssp             CSHHHHHHHHHHHTCCGG---GEEEEESCCCCCCHHHHHT-----TCEEEECCCC-------------CCTTEEECSSGG
T ss_pred             CCHHHHHHHHHHhCcCch---hEEEECCCchhhHHHHHHC-----CCEEEEECCCCccccccccccccCCCCeeeeCCHH
Confidence            578999999999999987   999999999 999999999     776444 2221       1   135777 889999


Q ss_pred             HHHHHHHHHH
Q 040896          270 EVMSFLRRLA  279 (288)
Q Consensus       270 ~v~~~l~~~~  279 (288)
                      ++..+|+++.
T Consensus       235 el~~~l~~~~  244 (251)
T 2pke_A          235 GWPAAVRALD  244 (251)
T ss_dssp             GHHHHHHHHH
T ss_pred             HHHHHHHHhC
Confidence            9988887765

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=97.54  E-value=2.8e-05  Score=65.35  Aligned_cols=66  Identities=18%  Similarity=0.255  Sum_probs=51.9

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceE-EEEecCC----C--CccceEEeCChhHHHHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYP-IIVSSVP----R--ETKALYSLRDPDEVMSF  274 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~-v~v~na~----~--~~~A~~~~~~~~~v~~~  274 (288)
                      -.|+.+++.+++++|++++   ++++|||+.||++|++.+     |++ +.+.++.    +  +..|++++++..++.++
T Consensus       170 Kp~~~~~~~~~~~~~~~~~---~~~~vGD~~~Di~~a~~a-----G~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~  241 (243)
T 2hsz_A          170 KPHPAPFYYLCGKFGLYPK---QILFVGDSQNDIFAAHSA-----GCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI  241 (243)
T ss_dssp             TTSSHHHHHHHHHHTCCGG---GEEEEESSHHHHHHHHHH-----TCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred             CcCHHHHHHHHHHhCcChh---hEEEEcCCHHHHHHHHHC-----CCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHH
Confidence            3568899999999999887   999999999999999999     766 5555431    1  24688999887776554


Q ss_pred             H
Q 040896          275 L  275 (288)
Q Consensus       275 l  275 (288)
                      |
T Consensus       242 l  242 (243)
T 2hsz_A          242 T  242 (243)
T ss_dssp             T
T ss_pred             h
Confidence            3

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=97.51  E-value=3.5e-05  Score=67.99  Aligned_cols=66  Identities=14%  Similarity=0.101  Sum_probs=53.5

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeC--ChhHHHHHHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLR--DPDEVMSFLR  276 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~--~~~~v~~~l~  276 (288)
                      -.|..+++.+++.+|++++   ++++|||+.||++|++.+     |+++++ |+.+.  ..|++++.  +..++..+|+
T Consensus       245 kpkp~~~~~~~~~lgv~~~---~~i~VGDs~~Di~aa~~A-----G~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~  314 (317)
T 4eze_A          245 ANKKQTLVDLAARLNIATE---NIIACGDGANDLPMLEHA-----GTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE  314 (317)
T ss_dssp             HHHHHHHHHHHHHHTCCGG---GEEEEECSGGGHHHHHHS-----SEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred             CCCHHHHHHHHHHcCCCcc---eEEEEeCCHHHHHHHHHC-----CCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence            4788999999999999887   999999999999999999     899999 55442  46777765  5666666553

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=97.39  E-value=4.7e-05  Score=61.97  Aligned_cols=71  Identities=8%  Similarity=0.032  Sum_probs=52.9

Q ss_pred             EeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--c-cceEE-eCChhHH
Q 040896          196 IRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--T-KALYS-LRDPDEV  271 (288)
Q Consensus       196 I~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~-~A~~~-~~~~~~v  271 (288)
                      ..|+ ...|..+++.+..    .++   ++++|||+.||++|.+.+     |+++++ |+...  . .+.++ +++.+++
T Consensus       127 ~~p~-p~~~~~~l~~l~~----~~~---~~~~iGD~~~Di~~a~~a-----G~~~~~-~~~~~~~~~~~~~~~~~~~~~l  192 (206)
T 1rku_A          127 QLRQ-KDPKRQSVIAFKS----LYY---RVIAAGDSYNDTTMLSEA-----HAGILF-HAPENVIREFPQFPAVHTYEDL  192 (206)
T ss_dssp             ECCS-SSHHHHHHHHHHH----TTC---EEEEEECSSTTHHHHHHS-----SEEEEE-SCCHHHHHHCTTSCEECSHHHH
T ss_pred             ecCC-CchHHHHHHHHHh----cCC---EEEEEeCChhhHHHHHhc-----CccEEE-CCcHHHHHHHhhhccccchHHH
Confidence            3477 7788888877643    445   999999999999999999     899887 43322  2 33443 6889999


Q ss_pred             HHHHHHHHH
Q 040896          272 MSFLRRLAR  280 (288)
Q Consensus       272 ~~~l~~~~~  280 (288)
                      .++|++++.
T Consensus       193 ~~~l~~~~~  201 (206)
T 1rku_A          193 KREFLKASS  201 (206)
T ss_dssp             HHHHHHHCS
T ss_pred             HHHHHHHhc
Confidence            999887653

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=97.38  E-value=0.00013  Score=59.06  Aligned_cols=34  Identities=18%  Similarity=0.105  Sum_probs=27.1

Q ss_pred             CCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           43 FMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        43 ~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      .+++.+.++|+.|++.+ .++++|||+...+...+
T Consensus        76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~  110 (211)
T 1l7m_A           76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIK  110 (211)
T ss_dssp             CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH
Confidence            45677888999999885 89999999987766543

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=97.28  E-value=0.00025  Score=56.78  Aligned_cols=50  Identities=16%  Similarity=0.159  Sum_probs=38.6

Q ss_pred             cCCcEEEEEecCCccccCcC------CCCCCCCCHHHHHHHHHHhhcC-CEEEEcCC
Q 040896           18 KGKKIVVFLDYDGTLSPIVE------DPDKAFMSDTMRMAVHEVAHFF-PTAIVSGR   67 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~~~~------~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR   67 (288)
                      .+..|++++|+||||+....      ......+.|.+.++|++|++.+ +++|+|+.
T Consensus        11 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~   67 (176)
T 2fpr_A           11 GSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQ   67 (176)
T ss_dssp             --CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred             CCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHCCCEEEEEECC
Confidence            35789999999999987421      1123467789999999999986 89999998

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=97.28  E-value=2.8e-05  Score=77.62  Aligned_cols=68  Identities=18%  Similarity=0.157  Sum_probs=53.9

Q ss_pred             EEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCC--h
Q 040896          193 VMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRD--P  268 (288)
Q Consensus       193 ~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~--~  268 (288)
                      +.++.|.   +|...++.++++ |   +   .|+++||+.||.+||+.+     +.||+|+++.+  +..|++++.+  .
T Consensus       561 ~arv~P~---~K~~iV~~lq~~-g---~---~Vam~GDGvNDapaLk~A-----dvGIAmg~gtd~ak~aADivl~~~~~  625 (885)
T 3b8c_A          561 FAGVFPE---HKYEIVKKLQER-K---H---IVGMTGDGVNDAPALKKA-----DIGIAVADATDAARGASDIVLTEPGL  625 (885)
T ss_dssp             EECCCHH---HHHHHHHHHHHT-T---C---CCCBCCCSSTTHHHHHHS-----SSCCCCSSSHHHHGGGCSSCCSSCSH
T ss_pred             EEEECHH---HHHHHHHHHHHC-C---C---eEEEEcCCchhHHHHHhC-----CEeEEeCCccHHHHHhcceeeccCch
Confidence            6667776   999999999985 3   3   889999999999999999     79999998755  4578988754  4


Q ss_pred             hHHHHHH
Q 040896          269 DEVMSFL  275 (288)
Q Consensus       269 ~~v~~~l  275 (288)
                      ..+.+.+
T Consensus       626 ~~I~~ai  632 (885)
T 3b8c_A          626 SVIISAV  632 (885)
T ss_dssp             HHHTHHH
T ss_pred             hHHHHHH
Confidence            4444433

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=97.26  E-value=0.0002  Score=57.02  Aligned_cols=47  Identities=19%  Similarity=0.188  Sum_probs=40.8

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecC
Q 040896          198 PCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSV  255 (288)
Q Consensus       198 ~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na  255 (288)
                      +. +..|+.+++.+++++|++     ++++|||+.||++|++.+     |+++++-+.
T Consensus       134 ~~-~kp~~~~~~~~~~~~~~~-----~~~~iGD~~~Di~~a~~a-----G~~~~~~~~  180 (190)
T 2fi1_A          134 FK-RKPNPESMLYLREKYQIS-----SGLVIGDRPIDIEAGQAA-----GLDTHLFTS  180 (190)
T ss_dssp             CC-CTTSCHHHHHHHHHTTCS-----SEEEEESSHHHHHHHHHT-----TCEEEECSC
T ss_pred             CC-CCCCHHHHHHHHHHcCCC-----eEEEEcCCHHHHHHHHHc-----CCeEEEECC
Confidence            45 668899999999999987     789999999999999999     888776544

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=97.25  E-value=0.00032  Score=64.20  Aligned_cols=49  Identities=20%  Similarity=0.240  Sum_probs=37.7

Q ss_pred             CcEEEEEecCCccccCcC------CCCC-CCCCHHHHHHHHHHhhcC-CEEEEcCCC
Q 040896           20 KKIVVFLDYDGTLSPIVE------DPDK-AFMSDTMRMAVHEVAHFF-PTAIVSGRC   68 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~------~~~~-~~i~~~~~~aL~~L~~~~-~v~i~TGR~   68 (288)
                      ..++++||+||||.....      +..+ ..+.+.+.++|++|++.+ +++|+|+++
T Consensus        57 ~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~  113 (416)
T 3zvl_A           57 QGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQM  113 (416)
T ss_dssp             CSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred             CCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCc
Confidence            568999999999986321      1111 135789999999999985 899999976

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=97.24  E-value=0.00033  Score=57.93  Aligned_cols=45  Identities=18%  Similarity=0.171  Sum_probs=39.8

Q ss_pred             CCCHHHHHHHHHHhcC---CCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEe
Q 040896          201 DWDKGRALEYLLDTFG---FNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVS  253 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~---~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~  253 (288)
                      +..|...++.+++.++   ++++   +++++|||.||++|++.+     |.+++|.
T Consensus       157 ~~~K~~~~~~~~~~~~~~~~~~~---~~~~vGDs~~D~~~~~~a-----g~~~~~~  204 (232)
T 3fvv_A          157 REGKVVRVNQWLAGMGLALGDFA---ESYFYSDSVNDVPLLEAV-----TRPIAAN  204 (232)
T ss_dssp             THHHHHHHHHHHHHTTCCGGGSS---EEEEEECCGGGHHHHHHS-----SEEEEES
T ss_pred             chHHHHHHHHHHHHcCCCcCchh---heEEEeCCHhhHHHHHhC-----CCeEEEC
Confidence            3468888999999999   8877   999999999999999999     8888873

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=97.24  E-value=8.1e-05  Score=63.58  Aligned_cols=61  Identities=18%  Similarity=0.012  Sum_probs=42.8

Q ss_pred             CcEEEEEecCCccccCcC----------C-----------CCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChh----hHh
Q 040896           20 KKIVVFLDYDGTLSPIVE----------D-----------PDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLD----KVS   73 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~----------~-----------~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~----~l~   73 (288)
                      ++.+++||+||||++...          .           .....+-|.+.+.|+.|++.+ .++++|||+..    ...
T Consensus        57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~  136 (260)
T 3pct_A           57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTV  136 (260)
T ss_dssp             -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHH
T ss_pred             CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHH
Confidence            456999999999997320          0           012345568899999999995 89999999764    444


Q ss_pred             hh---cCCCC
Q 040896           74 RF---VQLKN   80 (288)
Q Consensus        74 ~~---~~~~~   80 (288)
                      ..   +|++.
T Consensus       137 ~~L~~lGi~~  146 (260)
T 3pct_A          137 DDMKRLGFTG  146 (260)
T ss_dssp             HHHHHHTCCC
T ss_pred             HHHHHcCcCc
Confidence            43   36653

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=97.21  E-value=0.00027  Score=57.18  Aligned_cols=30  Identities=17%  Similarity=-0.014  Sum_probs=19.0

Q ss_pred             CCHHHHHHHHHHhhc-C-CEEEEcCCChhhHh
Q 040896           44 MSDTMRMAVHEVAHF-F-PTAIVSGRCLDKVS   73 (288)
Q Consensus        44 i~~~~~~aL~~L~~~-~-~v~i~TGR~~~~l~   73 (288)
                      +.|.+.++|++|++. + +++|+|+++...+.
T Consensus        74 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~  105 (193)
T 2i7d_A           74 PIPGALDAVREMNDLPDTQVFICTSPLLKYHH  105 (193)
T ss_dssp             BCTTHHHHHHHHHTSTTEEEEEEECCCSSCTT
T ss_pred             cCcCHHHHHHHHHhCCCCeEEEEeCCChhhHH
Confidence            445667777777766 4 67777777654433

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=97.20  E-value=0.00055  Score=57.67  Aligned_cols=71  Identities=11%  Similarity=0.097  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCc-eEEEEecCCCCccceEEeCChhHH-HHHHHHHHHH
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRG-YPIIVSSVPRETKALYSLRDPDEV-MSFLRRLARW  281 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g-~~v~v~na~~~~~A~~~~~~~~~v-~~~l~~~~~~  281 (288)
                      +.......++++|++++   ++++|||+.+|+.+-+.+     | .+|.+++......|++++++..++ .+.|++.++.
T Consensus       172 ~p~~~~~a~~~lg~~p~---e~l~VGDs~~Di~aA~~a-----G~~~i~v~~~~~~~~ad~vi~~l~eL~~~~i~~~~n~  243 (250)
T 4gib_A          172 HPEIFLMSAKGLNVNPQ---NCIGIEDASAGIDAINSA-----NMFSVGVGNYENLKKANLVVDSTNQLKFEYIQEKYNE  243 (250)
T ss_dssp             SSHHHHHHHHHHTCCGG---GEEEEESSHHHHHHHHHT-----TCEEEEESCTTTTTTSSEEESSGGGCCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhCCChH---HeEEECCCHHHHHHHHHc-----CCEEEEECChhHhccCCEEECChHhCCHHHHHHHHHH
Confidence            35688888999999988   999999999998877777     5 478888776667899999998887 5777777665


Q ss_pred             h
Q 040896          282 K  282 (288)
Q Consensus       282 ~  282 (288)
                      .
T Consensus       244 ~  244 (250)
T 4gib_A          244 Y  244 (250)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=96.23  E-value=6.2e-05  Score=64.45  Aligned_cols=69  Identities=22%  Similarity=0.264  Sum_probs=51.1

Q ss_pred             EEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEe--CCh
Q 040896          193 VMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSL--RDP  268 (288)
Q Consensus       193 ~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~--~~~  268 (288)
                      +-++.|.   .|..+++.    ++.+++   +++++||+.||+++++.+     |++++++++.+.  ..|++++  ++.
T Consensus       179 f~~~~p~---~k~~~~~~----l~~~~~---~~~~VGD~~~D~~aa~~A-----gv~va~g~~~~~~~~~ad~v~~~~~l  243 (263)
T 2yj3_A          179 YSNLSPE---DKVRIIEK----LKQNGN---KVLMIGDGVNDAAALALA-----DVSVAMGNGVDISKNVADIILVSNDI  243 (263)
Confidence            3344465   67655554    455555   899999999999999999     899999987543  4688888  677


Q ss_pred             hHHHHHHH
Q 040896          269 DEVMSFLR  276 (288)
Q Consensus       269 ~~v~~~l~  276 (288)
                      .++..+|+
T Consensus       244 ~~l~~~l~  251 (263)
T 2yj3_A          244 GTLLGLIK  251 (263)
Confidence            77776653

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=97.14  E-value=0.00055  Score=56.54  Aligned_cols=34  Identities=9%  Similarity=-0.159  Sum_probs=27.7

Q ss_pred             CCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           43 FMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        43 ~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      .+.+.+.+.|+.|++.+ +++|+||.+...+..++
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~  126 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIA  126 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence            34677888999999885 89999999987777654

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=97.12  E-value=0.00031  Score=58.19  Aligned_cols=58  Identities=14%  Similarity=0.066  Sum_probs=39.3

Q ss_pred             CCcEEEEEecCCccccCcCC--CC---CCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           19 GKKIVVFLDYDGTLSPIVED--PD---KAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~--~~---~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      ...++++||+||||++....  ..   -.......--+|++|++.+ +++|+||++...+...+
T Consensus        47 ~~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~~L~~L~~~G~~l~I~T~~~~~~~~~~l  110 (211)
T 3ij5_A           47 ANIRLLICDVDGVMSDGLIYMGNQGEELKAFNVRDGYGIRCLITSDIDVAIITGRRAKLLEDRA  110 (211)
T ss_dssp             TTCSEEEECCTTTTSSSEEEEETTSCEEEEEEHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH
T ss_pred             hCCCEEEEeCCCCEECCHHHHhhhhHHHHHhccchHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence            35689999999999983210  00   0111112222789999885 89999999998877764

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=97.10  E-value=9.6e-05  Score=63.19  Aligned_cols=52  Identities=17%  Similarity=-0.012  Sum_probs=38.9

Q ss_pred             CCcEEEEEecCCccccCcC----------CC-----------CCCCCCHHHHHHHHHHhhcC-CEEEEcCCChh
Q 040896           19 GKKIVVFLDYDGTLSPIVE----------DP-----------DKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLD   70 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~----------~~-----------~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~   70 (288)
                      .++.+++||+||||++...          ..           ....+-|.+.+.|+.|++.+ .++|+|||+..
T Consensus        56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~  129 (262)
T 3ocu_A           56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDS  129 (262)
T ss_dssp             TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred             CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCcc
Confidence            4668999999999997421          00           12234457788999999996 89999999864

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=97.09  E-value=0.00032  Score=56.95  Aligned_cols=48  Identities=10%  Similarity=0.148  Sum_probs=41.6

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCC
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVP  256 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~  256 (288)
                      +-.+..+++.+++.+|++++   ++++|||+.||++|.+.+     |+.+++.|+.
T Consensus       149 ~Kp~~~~~~~~~~~~~~~~~---~~~~igD~~~Di~~a~~a-----G~~~~~~~~~  196 (211)
T 2i6x_A          149 YKPNEDIFLEMIADSGMKPE---ETLFIDDGPANVATAERL-----GFHTYCPDNG  196 (211)
T ss_dssp             CTTSHHHHHHHHHHHCCCGG---GEEEECSCHHHHHHHHHT-----TCEEECCCTT
T ss_pred             CCCCHHHHHHHHHHhCCChH---HeEEeCCCHHHHHHHHHc-----CCEEEEECCH
Confidence            34557799999999999987   999999999999999999     8888877654

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=97.03  E-value=0.00061  Score=60.90  Aligned_cols=43  Identities=23%  Similarity=0.176  Sum_probs=35.8

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRC   68 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~   68 (288)
                      +.+.++||+||||+.     .. .+-+.+.++|+.|++.+ +++++|.++
T Consensus        12 ~~~~~l~D~DGvl~~-----g~-~~~p~a~~~l~~l~~~g~~~~~vTNn~   55 (352)
T 3kc2_A           12 KKIAFAFDIDGVLFR-----GK-KPIAGASDALKLLNRNKIPYILLTNGG   55 (352)
T ss_dssp             CCEEEEECCBTTTEE-----TT-EECTTHHHHHHHHHHTTCCEEEECSCC
T ss_pred             cCCEEEEECCCeeEc-----CC-eeCcCHHHHHHHHHHCCCEEEEEeCCC
Confidence            579999999999998     23 34568999999999985 899999654

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=96.99  E-value=0.0002  Score=59.03  Aligned_cols=64  Identities=25%  Similarity=0.284  Sum_probs=50.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC----ccceEEeCChhHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE----TKALYSLRDPDEVMSFLR  276 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~----~~A~~~~~~~~~v~~~l~  276 (288)
                      .|..+++.+++.+|+  +   ++++|||+.||+.|.+.+     |.+|.+++....    ..+++++.+..++.++|+
T Consensus       157 ~Kp~~~~~~~~~~~~--~---~~~~vGDs~~Di~~a~~a-----g~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l~  224 (225)
T 1nnl_A          157 GKGKVIKLLKEKFHF--K---KIIMIGDGATDMEACPPA-----DAFIGFGGNVIRQQVKDNAKWYITDFVELLGELE  224 (225)
T ss_dssp             HHHHHHHHHHHHHCC--S---CEEEEESSHHHHTTTTTS-----SEEEEECSSCCCHHHHHHCSEEESCGGGGCC---
T ss_pred             chHHHHHHHHHHcCC--C---cEEEEeCcHHhHHHHHhC-----CeEEEecCccccHHHHhcCCeeecCHHHHHHHHh
Confidence            699999999999998  4   899999999999998887     788888765332    358888888887766553

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=96.92  E-value=0.00024  Score=59.61  Aligned_cols=36  Identities=14%  Similarity=0.046  Sum_probs=27.9

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CE
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PT   61 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v   61 (288)
                      .|+|+||+||||++     +...+.+...++++++.+.+ .+
T Consensus        13 ~k~iifDlDGTL~d-----~~~~~~~~~~~~~~~l~~~g~~~   49 (251)
T 2pke_A           13 IQLVGFDGDDTLWK-----SEDYYRTAEADFEAILSGYLDLG   49 (251)
T ss_dssp             CCEEEECCBTTTBC-----CHHHHHHHHHHHHHHHTTTCCC-
T ss_pred             eeEEEEeCCCCCcc-----CcHhHHHHHHHHHHHHHHhCCch
Confidence            58999999999999     45556677788888887775 44

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=96.91  E-value=0.00044  Score=57.44  Aligned_cols=31  Identities=10%  Similarity=-0.026  Sum_probs=24.1

Q ss_pred             HHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           46 DTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        46 ~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      +.+.+.|++|++.+ .++++|+++...+...+
T Consensus       108 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l  139 (240)
T 2no4_A          108 PDAAETLEKLKSAGYIVAILSNGNDEMLQAAL  139 (240)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred             CCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence            56677888888875 88999999887766553

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=96.85  E-value=0.0023  Score=54.28  Aligned_cols=69  Identities=16%  Similarity=0.179  Sum_probs=56.2

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCC-cccHHHHHHHHhcCCce--EEEEecCCC-----CccceEEeCChhHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDD-KTDEDAFKVIRHMGRGY--PIIVSSVPR-----ETKALYSLRDPDEVMSF  274 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs-~ND~~Ml~~~~~~~~g~--~v~v~na~~-----~~~A~~~~~~~~~v~~~  274 (288)
                      -+....+.+++.+|++++   ++++|||| .||+.+-+.+     |+  ++.+.+...     ...+++++.+..++..+
T Consensus       177 P~p~~~~~~~~~~~~~~~---~~~~vGDs~~~Di~~A~~a-----G~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~  248 (260)
T 2gfh_A          177 PAPSIFYHCCDLLGVQPG---DCVMVGDTLETDIQGGLNA-----GLKATVWINKSGRVPLTSSPMPHYMVSSVLELPAL  248 (260)
T ss_dssp             TCHHHHHHHHHHHTCCGG---GEEEEESCTTTHHHHHHHT-----TCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHH
T ss_pred             CCHHHHHHHHHHcCCChh---hEEEECCCchhhHHHHHHC-----CCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHH
Confidence            347789999999999987   99999996 9999999988     77  677865422     24688999999999888


Q ss_pred             HHHHH
Q 040896          275 LRRLA  279 (288)
Q Consensus       275 l~~~~  279 (288)
                      |..+.
T Consensus       249 l~~~~  253 (260)
T 2gfh_A          249 LQSID  253 (260)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            87654

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=96.71  E-value=0.0011  Score=54.71  Aligned_cols=48  Identities=8%  Similarity=0.212  Sum_probs=41.7

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE  258 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~  258 (288)
                      -+....+.+++.+|++++   ++++|||+.||+.|.+.+     |+.+++.|+...
T Consensus       174 P~~~~~~~~~~~~g~~~~---~~~~vGD~~~Di~~a~~a-----G~~~i~v~~~~~  221 (229)
T 4dcc_A          174 PEPEIFKAVTEDAGIDPK---ETFFIDDSEINCKVAQEL-----GISTYTPKAGED  221 (229)
T ss_dssp             TCHHHHHHHHHHHTCCGG---GEEEECSCHHHHHHHHHT-----TCEEECCCTTCC
T ss_pred             CCHHHHHHHHHHcCCCHH---HeEEECCCHHHHHHHHHc-----CCEEEEECCHHH
Confidence            345899999999999987   999999999999999999     888888776543

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=96.69  E-value=0.001  Score=55.40  Aligned_cols=69  Identities=17%  Similarity=0.105  Sum_probs=50.0

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC---c-cceEEeCChhHHHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE---T-KALYSLRDPDEVMSFLR  276 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~---~-~A~~~~~~~~~v~~~l~  276 (288)
                      +..|..+++.    ++++++   +++++||+.+|+.+.+.+     |..++..+....   . .+++++.+..++.++|.
T Consensus       149 ~~~K~~~~~~----~~~~~~---~~~~vGDs~~Di~~a~~a-----G~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~  216 (236)
T 2fea_A          149 GCCKPSVIHE----LSEPNQ---YIIMIGDSVTDVEAAKLS-----DLCFARDYLLNECREQNLNHLPYQDFYEIRKEIE  216 (236)
T ss_dssp             SSCHHHHHHH----HCCTTC---EEEEEECCGGGHHHHHTC-----SEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHH
T ss_pred             CCcHHHHHHH----HhccCC---eEEEEeCChHHHHHHHhC-----CeeeechHHHHHHHHCCCCeeecCCHHHHHHHHH
Confidence            3457776654    577777   999999999999999988     777654321111   1 37788899999998887


Q ss_pred             HHHHH
Q 040896          277 RLARW  281 (288)
Q Consensus       277 ~~~~~  281 (288)
                      ++++.
T Consensus       217 ~~~~~  221 (236)
T 2fea_A          217 NVKEV  221 (236)
T ss_dssp             TSHHH
T ss_pred             HhHHH
Confidence            76443

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=96.59  E-value=0.0011  Score=53.61  Aligned_cols=33  Identities=12%  Similarity=-0.055  Sum_probs=25.8

Q ss_pred             CCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           44 MSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        44 i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      +.+.+.++|+.|++.+ .++++|+.+...+...+
T Consensus        71 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l  104 (205)
T 3m9l_A           71 PAPGAVELVRELAGRGYRLGILTRNARELAHVTL  104 (205)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred             CCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHH
Confidence            3456778899998885 89999999987776654

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=96.53  E-value=0.0011  Score=53.38  Aligned_cols=43  Identities=16%  Similarity=0.322  Sum_probs=37.2

Q ss_pred             HHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecC
Q 040896          205 GRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSV  255 (288)
Q Consensus       205 g~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na  255 (288)
                      ..+++.+++.+|++++   ++++|||+.||+.|.+.+     |+.+++.|.
T Consensus       151 ~~~~~~~~~~~~~~~~---~~~~vgD~~~Di~~a~~a-----G~~~~~~~~  193 (206)
T 2b0c_A          151 ARIYQHVLQAEGFSPS---DTVFFDDNADNIEGANQL-----GITSILVKD  193 (206)
T ss_dssp             HHHHHHHHHHHTCCGG---GEEEEESCHHHHHHHHTT-----TCEEEECCS
T ss_pred             HHHHHHHHHHcCCCHH---HeEEeCCCHHHHHHHHHc-----CCeEEEecC
Confidence            5589999999999887   999999999999999988     887766544

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=96.53  E-value=0.0019  Score=56.72  Aligned_cols=34  Identities=21%  Similarity=0.043  Sum_probs=28.1

Q ss_pred             CCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           43 FMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        43 ~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      .+.+.+.+.|++|++.+ +++|+||.+...+...+
T Consensus       179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l  213 (317)
T 4eze_A          179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLK  213 (317)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH
T ss_pred             EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHH
Confidence            45677889999999985 89999999988777654

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=96.49  E-value=0.0023  Score=52.17  Aligned_cols=59  Identities=14%  Similarity=0.144  Sum_probs=46.1

Q ss_pred             cCCcEEEEEecCCccccCcCCCCC------------------CCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhc
Q 040896           18 KGKKIVVFLDYDGTLSPIVEDPDK------------------AFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~~~~~~~~------------------~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~   76 (288)
                      ..+++.+++||||||+.....+..                  -..-|.+.+.|++|.+...++|+|..+...+...+
T Consensus        25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl  101 (195)
T 2hhl_A           25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVA  101 (195)
T ss_dssp             GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHH
T ss_pred             cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHH
Confidence            356899999999999985322111                  13468899999999988889999999998877764

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=96.48  E-value=0.0027  Score=51.46  Aligned_cols=33  Identities=9%  Similarity=-0.040  Sum_probs=26.3

Q ss_pred             CCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           44 MSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        44 i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      +.+.+.+.|+.|++.+ +++++|+.+...+...+
T Consensus        76 ~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l  109 (217)
T 3m1y_A           76 LFEGALELVSALKEKNYKVVCFSGGFDLATNHYR  109 (217)
T ss_dssp             BCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHH
Confidence            4567889999999885 89999998887766653

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=96.44  E-value=0.0023  Score=51.36  Aligned_cols=45  Identities=9%  Similarity=0.029  Sum_probs=38.1

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEe
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVS  253 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~  253 (288)
                      +-.+...++.+++.+|++++   ++++|||+.||++|.+.+     |+.+++-
T Consensus       140 ~Kp~~~~~~~~~~~~~~~~~---~~~~vgD~~~Di~~a~~a-----G~~~~~~  184 (200)
T 3cnh_A          140 MKPNPAMYRLGLTLAQVRPE---EAVMVDDRLQNVQAARAV-----GMHAVQC  184 (200)
T ss_dssp             CTTCHHHHHHHHHHHTCCGG---GEEEEESCHHHHHHHHHT-----TCEEEEC
T ss_pred             CCCCHHHHHHHHHHcCCCHH---HeEEeCCCHHHHHHHHHC-----CCEEEEE
Confidence            34567799999999999887   999999999999999998     7765543

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=96.44  E-value=0.0027  Score=51.07  Aligned_cols=59  Identities=14%  Similarity=0.202  Sum_probs=46.2

Q ss_pred             cCCcEEEEEecCCccccCcCCCCC------------------CCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhc
Q 040896           18 KGKKIVVFLDYDGTLSPIVEDPDK------------------AFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~~~~~~~~------------------~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~   76 (288)
                      ..+++.+++|||+||++....+..                  -..-|.+.+.|++|.+...++|.|..+...+...+
T Consensus        12 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl   88 (181)
T 2ght_A           12 DSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVA   88 (181)
T ss_dssp             GTTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHH
T ss_pred             cCCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHH
Confidence            356799999999999985322211                  13578899999999988889999999998777764

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=96.41  E-value=0.00018  Score=58.59  Aligned_cols=31  Identities=16%  Similarity=0.325  Sum_probs=23.3

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHh
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVA   56 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~   56 (288)
                      .|+|+||+||||++     +...+++...++++++.
T Consensus         2 ~k~i~fDlDGTL~d-----~~~~~~~~~~~~~~~~g   32 (221)
T 2wf7_A            2 FKAVLFDLDGVITD-----TAEYHFRAWKALAEEIG   32 (221)
T ss_dssp             CCEEEECCBTTTBT-----HHHHHHHHHHHHHHHTT
T ss_pred             CcEEEECCCCcccC-----ChHHHHHHHHHHHHHcC
Confidence            47899999999998     34445666677777763

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=96.37  E-value=0.0044  Score=50.50  Aligned_cols=33  Identities=18%  Similarity=0.125  Sum_probs=24.0

Q ss_pred             CCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           44 MSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        44 i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      +.+.+.++|++|++.+ +++++|+.+...+...+
T Consensus        97 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l  130 (230)
T 3um9_A           97 PFADVPQALQQLRAAGLKTAILSNGSRHSIRQVV  130 (230)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred             CCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHH
Confidence            3456677888888774 78888888877666543

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=96.35  E-value=0.0013  Score=54.17  Aligned_cols=31  Identities=16%  Similarity=0.131  Sum_probs=22.2

Q ss_pred             HHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           46 DTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        46 ~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      +.+.+.|+.|++.+ +++++|+++...+...+
T Consensus        98 ~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l  129 (232)
T 1zrn_A           98 SEVPDSLRELKRRGLKLAILSNGSPQSIDAVV  129 (232)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred             ccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence            45667788887774 78888888877665543

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.31  E-value=0.0011  Score=54.14  Aligned_cols=34  Identities=18%  Similarity=0.231  Sum_probs=27.4

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF   59 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~   59 (288)
                      .|+|+||+||||++     +...+++...++++.+.+.+
T Consensus         8 ik~i~fDlDGTL~~-----~~~~~~~~~~~~~~~l~~~g   41 (234)
T 3ddh_A            8 IKVIAFDADDTLWS-----NEPFFQEVEKQYTDLLKPYG   41 (234)
T ss_dssp             CCEEEECCBTTTBC-----CHHHHHHHHHHHHHHTGGGS
T ss_pred             ccEEEEeCCCCCcc-----CcchHHHHHHHHHHHHHhcC
Confidence            68999999999998     44456667777888888766

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=96.24  E-value=0.004  Score=50.95  Aligned_cols=32  Identities=13%  Similarity=0.026  Sum_probs=23.2

Q ss_pred             CHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           45 SDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        45 ~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      .+.+.++|+.|++.+ +++++|+.+...+...+
T Consensus       101 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l  133 (233)
T 3umb_A          101 FPENVPVLRQLREMGLPLGILSNGNPQMLEIAV  133 (233)
T ss_dssp             CTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHH
T ss_pred             CCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHH
Confidence            345567778888774 88899988887766654

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=96.23  E-value=0.0028  Score=53.67  Aligned_cols=33  Identities=9%  Similarity=0.049  Sum_probs=25.8

Q ss_pred             CCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           44 MSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        44 i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      +.+.+.++|+.|++.+ +++++||++...+...+
T Consensus       145 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~  178 (280)
T 3skx_A          145 IRPESREAISKLKAIGIKCMMLTGDNRFVAKWVA  178 (280)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred             CCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence            4467788888888874 88899999888777654

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=96.21  E-value=0.0016  Score=52.42  Aligned_cols=16  Identities=19%  Similarity=0.403  Sum_probs=14.1

Q ss_pred             CcEEEEEecCCccccC
Q 040896           20 KKIVVFLDYDGTLSPI   35 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~   35 (288)
                      ..++|+||+||||++.
T Consensus         6 ~~k~viFDlDGTL~d~   21 (206)
T 2b0c_A            6 AKMLYIFDLGNVIVDI   21 (206)
T ss_dssp             CCCEEEECCBTTTEEE
T ss_pred             cccEEEEcCCCeeecC
Confidence            4689999999999984

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=96.20  E-value=0.0047  Score=49.69  Aligned_cols=33  Identities=18%  Similarity=0.276  Sum_probs=25.5

Q ss_pred             CCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           44 MSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        44 i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      +.+.+.+.|+.|++.+ +++++|+.+...+...+
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~  116 (219)
T 3kd3_A           83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFA  116 (219)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH
T ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHH
Confidence            4556778888888885 89999999887776653

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=96.06  E-value=0.0049  Score=50.45  Aligned_cols=33  Identities=15%  Similarity=0.172  Sum_probs=26.4

Q ss_pred             CCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           44 MSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        44 i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      +.+.+.++|++|++.+ +++|+|+++...+...+
T Consensus        87 ~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l  120 (225)
T 1nnl_A           87 LTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA  120 (225)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH
T ss_pred             CCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Confidence            4567788899999885 89999999987776654

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=95.98  E-value=0.0027  Score=51.05  Aligned_cols=29  Identities=10%  Similarity=0.289  Sum_probs=18.8

Q ss_pred             HHHHHHHHHHhhcCCEEEEcCCChhhHhhh
Q 040896           46 DTMRMAVHEVAHFFPTAIVSGRCLDKVSRF   75 (288)
Q Consensus        46 ~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~   75 (288)
                      +.+.+ |+.|++..+++++|+++...+...
T Consensus        77 ~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~  105 (201)
T 2w43_A           77 EDTKY-LKEISEIAEVYALSNGSINEVKQH  105 (201)
T ss_dssp             GGGGG-HHHHHHHSEEEEEESSCHHHHHHH
T ss_pred             CChHH-HHHHHhCCeEEEEeCcCHHHHHHH
Confidence            34445 666655566888888887665554

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=95.94  E-value=0.0031  Score=52.99  Aligned_cols=29  Identities=14%  Similarity=0.096  Sum_probs=21.7

Q ss_pred             cEEEEEecCCccccCcCCCCCC-CCCHHHHHHHHH
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKA-FMSDTMRMAVHE   54 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~-~i~~~~~~aL~~   54 (288)
                      .|+|+||+||||++     +.. .+.+...+++++
T Consensus         6 ik~i~fDlDGTLld-----~~~~~~~~~~~~~l~~   35 (267)
T 1swv_A            6 IEAVIFAWAGTTVD-----YGCFAPLEVFMEIFHK   35 (267)
T ss_dssp             CCEEEECSBTTTBS-----TTCCTTHHHHHHHHHT
T ss_pred             ceEEEEecCCCEEe-----CCCccHHHHHHHHHHH
Confidence            68999999999999     344 456666666655

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=95.87  E-value=0.0017  Score=51.77  Aligned_cols=30  Identities=20%  Similarity=0.238  Sum_probs=22.2

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHH
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV   55 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L   55 (288)
                      .|+|+||+||||++     +...+++...++++++
T Consensus         4 ~k~i~fDlDGTL~~-----~~~~~~~~~~~~~~~~   33 (207)
T 2go7_A            4 KTAFIWDLDGTLLD-----SYEAILSGIEETFAQF   33 (207)
T ss_dssp             CCEEEECTBTTTEE-----CHHHHHHHHHHHHHHH
T ss_pred             ccEEEEeCCCcccc-----cHHHHHHHHHHHHHHc
Confidence            57999999999998     3444555666666665

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=95.85  E-value=0.0014  Score=52.00  Aligned_cols=30  Identities=13%  Similarity=0.010  Sum_probs=20.6

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHH
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV   55 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L   55 (288)
                      .++|+||+||||++     +...+++...++++++
T Consensus         6 ~k~i~fDlDGTL~d-----~~~~~~~~~~~~~~~~   35 (190)
T 2fi1_A            6 YHDYIWDLGGTLLD-----NYETSTAAFVETLALY   35 (190)
T ss_dssp             CSEEEECTBTTTBC-----HHHHHHHHHHHHHHHT
T ss_pred             ccEEEEeCCCCcCC-----CHHHHHHHHHHHHHHh
Confidence            58999999999998     3333444555555544

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=95.83  E-value=0.0041  Score=56.20  Aligned_cols=46  Identities=20%  Similarity=0.185  Sum_probs=33.6

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEe
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVS  253 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~  253 (288)
                      -.|..+|+.++... +...   .++++|||.||++||+.+.+.  ++++.+.
T Consensus       296 ~gK~~~i~~~~~~~-~~~~---~i~a~GDs~~D~~ML~~~~~~--~~~liin  341 (385)
T 4gxt_A          296 EGKVQTINKLIKND-RNYG---PIMVGGDSDGDFAMLKEFDHT--DLSLIIH  341 (385)
T ss_dssp             HHHHHHHHHHTCCT-TEEC---CSEEEECSGGGHHHHHHCTTC--SEEEEEC
T ss_pred             CchHHHHHHHHHhc-CCCC---cEEEEECCHhHHHHHhcCccC--ceEEEEc
Confidence            35888888776432 2223   789999999999999987653  5777764

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=95.75  E-value=0.011  Score=49.35  Aligned_cols=15  Identities=33%  Similarity=0.308  Sum_probs=13.1

Q ss_pred             cEEEEEecCCccccC
Q 040896           21 KIVVFLDYDGTLSPI   35 (288)
Q Consensus        21 ~~li~~DlDGTL~~~   35 (288)
                      .|+|+||+||||++.
T Consensus         2 ~k~viFDlDGTL~d~   16 (253)
T 1qq5_A            2 IKAVVFDAYGTLFDV   16 (253)
T ss_dssp             CCEEEECTBTTTBCT
T ss_pred             CcEEEEeCCCCCCcc
Confidence            378999999999984

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=95.56  E-value=0.012  Score=51.80  Aligned_cols=44  Identities=11%  Similarity=-0.012  Sum_probs=32.1

Q ss_pred             CCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc-------CCCCeEEEccC
Q 040896           44 MSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV-------QLKNVVYAGSH   87 (288)
Q Consensus        44 i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~-------~~~~~~~i~~n   87 (288)
                      +.+.+++.++.|++++ .|+||||-+...++++.       |+|...+||..
T Consensus       144 ~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~  195 (327)
T 4as2_A          144 VFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVT  195 (327)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEEC
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeee
Confidence            5667888888888885 89999999888887763       45544566543

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=95.55  E-value=0.0028  Score=51.67  Aligned_cols=30  Identities=17%  Similarity=0.245  Sum_probs=20.5

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHH
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV   55 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L   55 (288)
                      .|+|+||+||||++     ....+.+...++++++
T Consensus         4 ik~i~fDlDGTL~d-----~~~~~~~~~~~~~~~~   33 (229)
T 2fdr_A            4 FDLIIFDCDGVLVD-----SEIIAAQVESRLLTEA   33 (229)
T ss_dssp             CSEEEECSBTTTBC-----CHHHHHHHHHHHHHHT
T ss_pred             ccEEEEcCCCCcCc-----cHHHHHHHHHHHHHHh
Confidence            57999999999998     3333444455555544

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=95.51  E-value=0.0033  Score=50.40  Aligned_cols=15  Identities=27%  Similarity=0.372  Sum_probs=13.6

Q ss_pred             CcEEEEEecCCcccc
Q 040896           20 KKIVVFLDYDGTLSP   34 (288)
Q Consensus        20 ~~~li~~DlDGTL~~   34 (288)
                      ..|+|+||+||||++
T Consensus         4 m~k~i~fDlDGTL~~   18 (214)
T 3e58_A            4 MVEAIIFDMDGVLFD   18 (214)
T ss_dssp             CCCEEEEESBTTTBC
T ss_pred             cccEEEEcCCCCccc
Confidence            368999999999998

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=95.43  E-value=0.0021  Score=53.50  Aligned_cols=31  Identities=16%  Similarity=0.191  Sum_probs=22.2

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHH
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV   55 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L   55 (288)
                      ..|+|+||+||||++     ....+++...++++++
T Consensus        21 ~ik~i~fDlDGTL~d-----~~~~~~~~~~~~~~~~   51 (254)
T 3umc_A           21 GMRAILFDVFGTLVD-----WRSSLIEQFQALEREL   51 (254)
T ss_dssp             SCCEEEECCBTTTEE-----HHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEeCCCccEe-----cCccHHHHHHHHHHHh
Confidence            468999999999998     3334455566666555

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=95.42  E-value=0.0087  Score=48.50  Aligned_cols=69  Identities=17%  Similarity=0.223  Sum_probs=48.8

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceE-E-EEecCC--CC---ccceEEeCChhHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYP-I-IVSSVP--RE---TKALYSLRDPDEVMSFL  275 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~-v-~v~na~--~~---~~A~~~~~~~~~v~~~l  275 (288)
                      -+....+..++++|++++   ++++|||+.+|+.+-+.+     |+. | .+..+.  .+   .....++.+++++.+.|
T Consensus       141 P~p~~~~~a~~~lg~~p~---e~l~VgDs~~Di~aA~~a-----G~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli~~l  212 (216)
T 3kbb_A          141 PDPEIYLLVLERLNVVPE---KVVVFEDSKSGVEAAKSA-----GIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVL  212 (216)
T ss_dssp             TSTHHHHHHHHHHTCCGG---GEEEEECSHHHHHHHHHT-----TCCCEEEECCSSSCCHHHHHTTCSEEECGGGHHHHH
T ss_pred             ccHHHHHHHHHhhCCCcc---ceEEEecCHHHHHHHHHc-----CCcEEEEecCCCCCHHHHHhCCCcEECCHHHHHHHH
Confidence            445788999999999988   999999999998887777     653 3 344432  21   12223344678888888


Q ss_pred             HHHH
Q 040896          276 RRLA  279 (288)
Q Consensus       276 ~~~~  279 (288)
                      ++++
T Consensus       213 ~eLL  216 (216)
T 3kbb_A          213 KEVL  216 (216)
T ss_dssp             HHHC
T ss_pred             HHHC
Confidence            8763

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=95.41  E-value=0.0036  Score=51.90  Aligned_cols=31  Identities=23%  Similarity=0.325  Sum_probs=21.1

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHH
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV   55 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L   55 (288)
                      ..|+|+||+||||++     ....+.+...++++++
T Consensus        23 ~~k~i~fDlDGTL~d-----~~~~~~~~~~~~~~~~   53 (243)
T 3qxg_A           23 KLKAVLFDMDGVLFN-----SMPYHSEAWHQVMKTH   53 (243)
T ss_dssp             CCCEEEECSBTTTBC-----CHHHHHHHHHHHHHHT
T ss_pred             cCCEEEEcCCCCCCC-----CHHHHHHHHHHHHHHh
Confidence            368999999999998     3334444555555543

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=95.39  E-value=0.0027  Score=52.11  Aligned_cols=29  Identities=14%  Similarity=0.242  Sum_probs=19.6

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHH
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHE   54 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~   54 (288)
                      .++|+||+||||++     +...+.+...+++++
T Consensus         2 ik~i~fDlDGTL~d-----~~~~~~~~~~~~~~~   30 (233)
T 3nas_A            2 LKAVIFDLDGVITD-----TAEYHFLAWKHIAEQ   30 (233)
T ss_dssp             CCEEEECSBTTTBC-----HHHHHHHHHHHHHHH
T ss_pred             CcEEEECCCCCcCC-----CHHHHHHHHHHHHHH
Confidence            57999999999998     333344444555544

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=95.33  E-value=0.00074  Score=57.66  Aligned_cols=50  Identities=14%  Similarity=0.007  Sum_probs=30.0

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHh--hcC-CEEEEcCCChhhHhhh
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVA--HFF-PTAIVSGRCLDKVSRF   75 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~--~~~-~v~i~TGR~~~~l~~~   75 (288)
                      .++|+||+||||++     +...+.+...++++++.  ... .+..++||+.....+.
T Consensus        35 ik~iifDlDGTLld-----s~~~~~~~~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~   87 (275)
T 2qlt_A           35 INAALFDVDGTIII-----SQPAIAAFWRDFGKDKPYFDAEHVIHISHGWRTYDAIAK   87 (275)
T ss_dssp             ESEEEECCBTTTEE-----CHHHHHHHHHHHHTTCTTCCHHHHHHHCTTCCHHHHHHH
T ss_pred             CCEEEECCCCCCCC-----CHHHHHHHHHHHHHHcCCCCHHHHHHHhcCCCHHHHHHH
Confidence            47999999999998     33334444455554442  111 2345678877655443

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=95.32  E-value=0.003  Score=51.75  Aligned_cols=30  Identities=17%  Similarity=0.224  Sum_probs=20.4

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHH
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHE   54 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~   54 (288)
                      +.|+|+||+||||++     ....++....+++++
T Consensus         6 ~~k~i~fDlDGTL~d-----~~~~~~~~~~~~~~~   35 (238)
T 3ed5_A            6 RYRTLLFDVDDTILD-----FQAAEALALRLLFED   35 (238)
T ss_dssp             CCCEEEECCBTTTBC-----HHHHHHHHHHHHHHH
T ss_pred             cCCEEEEcCcCcCcC-----CchhHHHHHHHHHHH
Confidence            468999999999998     333344444555554

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=95.24  E-value=0.011  Score=48.45  Aligned_cols=58  Identities=3%  Similarity=0.078  Sum_probs=44.8

Q ss_pred             CCcEEEEEecCCccccCcCCCCC---CCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhc
Q 040896           19 GKKIVVFLDYDGTLSPIVEDPDK---AFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~~~~---~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~   76 (288)
                      .+++.+++|||+||+.....+..   -...|.+.+.|+++.+...++|.|.-+..-+..++
T Consensus        32 ~~~~tLVLDLDeTLvh~~~~~~~~~~v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl   92 (204)
T 3qle_A           32 QRPLTLVITLEDFLVHSEWSQKHGWRTAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIA   92 (204)
T ss_dssp             CCSEEEEEECBTTTEEEEEETTTEEEEEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHH
T ss_pred             CCCeEEEEeccccEEeeeccccCceeEEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHH
Confidence            46789999999999985322211   24578899999999966689999999988777764

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=95.23  E-value=0.0033  Score=52.02  Aligned_cols=31  Identities=13%  Similarity=0.027  Sum_probs=22.0

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHH
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV   55 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L   55 (288)
                      ..|+|+||+||||++     ....+.....++++++
T Consensus        14 ~~k~i~fDlDGTL~d-----~~~~~~~~~~~~~~~~   44 (254)
T 3umg_A           14 NVRAVLFDTFGTVVD-----WRTGIATAVADYAARH   44 (254)
T ss_dssp             BCCEEEECCBTTTBC-----HHHHHHHHHHHHHHHT
T ss_pred             CceEEEEeCCCceec-----CchHHHHHHHHHHHHh
Confidence            478999999999998     3334455556666554

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=95.22  E-value=0.0057  Score=50.44  Aligned_cols=31  Identities=16%  Similarity=0.222  Sum_probs=21.3

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHH
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV   55 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L   55 (288)
                      ..|+|+||+||||++     +...+.+...++++++
T Consensus        22 ~~k~i~fDlDGTL~d-----~~~~~~~~~~~~~~~~   52 (247)
T 3dv9_A           22 DLKAVLFDMDGVLFD-----SMPNHAESWHKIMKRF   52 (247)
T ss_dssp             CCCEEEEESBTTTBC-----CHHHHHHHHHHHHHHT
T ss_pred             CCCEEEECCCCccCc-----CHHHHHHHHHHHHHHc
Confidence            469999999999998     3333444555555543

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=95.11  E-value=0.0039  Score=51.88  Aligned_cols=32  Identities=16%  Similarity=0.180  Sum_probs=21.5

Q ss_pred             CCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHH
Q 040896           19 GKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV   55 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L   55 (288)
                      ...|+|+||+||||++     ....+.+...++++++
T Consensus        28 ~~ik~i~fDlDGTL~d-----~~~~~~~~~~~~~~~~   59 (250)
T 3l5k_A           28 QPVTHLIFDMDGLLLD-----TERLYSVVFQEICNRY   59 (250)
T ss_dssp             CCCSEEEEETBTTTBC-----HHHHHHHHHHHHHHHT
T ss_pred             cCCcEEEEcCCCCcCC-----CHHHHHHHHHHHHHHh
Confidence            3578999999999998     3333444555555544

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=95.06  E-value=0.016  Score=52.66  Aligned_cols=34  Identities=12%  Similarity=0.142  Sum_probs=27.1

Q ss_pred             CCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           43 FMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        43 ~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      .+.+.+.+.|+.|++.+ +++|+||.+...+...+
T Consensus       256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~  290 (415)
T 3p96_A          256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLA  290 (415)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH
Confidence            34567788999999885 89999999887766653

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=95.04  E-value=0.005  Score=50.02  Aligned_cols=14  Identities=43%  Similarity=0.721  Sum_probs=13.0

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .++|+||+||||++
T Consensus         4 ~k~viFDlDGTL~d   17 (210)
T 2ah5_A            4 ITAIFFDLDGTLVD   17 (210)
T ss_dssp             CCEEEECSBTTTEE
T ss_pred             CCEEEEcCCCcCcc
Confidence            57999999999998

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=95.04  E-value=0.0046  Score=50.43  Aligned_cols=30  Identities=20%  Similarity=0.236  Sum_probs=20.0

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHH
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHE   54 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~   54 (288)
                      ..++|+||+||||++     ....+.+...+++++
T Consensus         5 ~~k~i~fDlDGTL~~-----~~~~~~~~~~~~~~~   34 (233)
T 3s6j_A            5 PQTSFIFDLDGTLTD-----SVYQNVAAWKEALDA   34 (233)
T ss_dssp             CCCEEEECCBTTTEE-----CHHHHHHHHHHHHHH
T ss_pred             cCcEEEEcCCCcccc-----ChHHHHHHHHHHHHH
Confidence            468999999999998     333334444444444

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=94.92  E-value=0.0044  Score=50.75  Aligned_cols=15  Identities=33%  Similarity=0.432  Sum_probs=13.6

Q ss_pred             CcEEEEEecCCcccc
Q 040896           20 KKIVVFLDYDGTLSP   34 (288)
Q Consensus        20 ~~~li~~DlDGTL~~   34 (288)
                      ..|+|+||+||||++
T Consensus         4 ~~k~i~fDlDGTL~d   18 (240)
T 3qnm_A            4 KYKNLFFDLDDTIWA   18 (240)
T ss_dssp             CCSEEEECCBTTTBC
T ss_pred             CceEEEEcCCCCCcC
Confidence            368999999999998

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=94.90  E-value=0.038  Score=44.01  Aligned_cols=37  Identities=14%  Similarity=0.150  Sum_probs=34.0

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      ..|...++.+++.++++++   ++++|||+.+|+.+.+.+
T Consensus       120 ~~k~~~~~~~~~~~~~~~~---~~~~igD~~~Di~~a~~a  156 (187)
T 2wm8_A          120 GSKITHFERLQQKTGIPFS---QMIFFDDERRNIVDVSKL  156 (187)
T ss_dssp             SCHHHHHHHHHHHHCCCGG---GEEEEESCHHHHHHHHTT
T ss_pred             CchHHHHHHHHHHcCCChH---HEEEEeCCccChHHHHHc
Confidence            3788999999999999887   999999999999998887

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=94.85  E-value=0.041  Score=47.35  Aligned_cols=50  Identities=24%  Similarity=0.229  Sum_probs=37.4

Q ss_pred             cEEEEEecCCccccCcCCC-------CCCCCCHHHHHHHHHHhhcC-CEEEEcCCChh
Q 040896           21 KIVVFLDYDGTLSPIVEDP-------DKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLD   70 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~-------~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~   70 (288)
                      .+.+++|+|||+......-       ....+-+.+.++|+.|++++ +++++|||+..
T Consensus       159 ~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~  216 (301)
T 1ltq_A          159 PKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESG  216 (301)
T ss_dssp             CEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCC
T ss_pred             cceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence            4788999999998732110       01234689999999999985 89999999843

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=94.84  E-value=0.0058  Score=51.11  Aligned_cols=32  Identities=19%  Similarity=0.296  Sum_probs=21.4

Q ss_pred             CCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHH
Q 040896           19 GKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV   55 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L   55 (288)
                      ...++|+||+||||++     ....+.+...++++++
T Consensus        26 ~~ik~i~fDlDGTL~d-----~~~~~~~~~~~~~~~~   57 (259)
T 4eek_A           26 APFDAVLFDLDGVLVE-----SEGIIAQVWQSVLAER   57 (259)
T ss_dssp             CCCSEEEEESBTTTEE-----CHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEECCCCCccc-----CHHHHHHHHHHHHHHh
Confidence            3578999999999998     3333444444555543

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=94.81  E-value=0.0045  Score=49.90  Aligned_cols=14  Identities=36%  Similarity=0.570  Sum_probs=13.0

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .++|+||+||||++
T Consensus         4 ~k~iifDlDGTL~d   17 (209)
T 2hdo_A            4 YQALMFDIDGTLTN   17 (209)
T ss_dssp             CSEEEECSBTTTEE
T ss_pred             ccEEEEcCCCCCcC
Confidence            47999999999998

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=94.78  E-value=0.011  Score=49.56  Aligned_cols=15  Identities=27%  Similarity=0.350  Sum_probs=13.8

Q ss_pred             CcEEEEEecCCcccc
Q 040896           20 KKIVVFLDYDGTLSP   34 (288)
Q Consensus        20 ~~~li~~DlDGTL~~   34 (288)
                      ..++|+||+||||++
T Consensus        13 ~~k~i~fDlDGTL~d   27 (277)
T 3iru_A           13 PVEALILDWAGTTID   27 (277)
T ss_dssp             CCCEEEEESBTTTBS
T ss_pred             cCcEEEEcCCCCccc
Confidence            468999999999998

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=94.76  E-value=0.044  Score=40.60  Aligned_cols=36  Identities=8%  Similarity=-0.009  Sum_probs=31.7

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      -+....+.+++.++++++   +++++||+.+|+.+.+.+
T Consensus        75 p~~~~~~~~~~~~~~~~~---~~~~vgD~~~di~~a~~~  110 (137)
T 2pr7_A           75 PEEAAFQAAADAIDLPMR---DCVLVDDSILNVRGAVEA  110 (137)
T ss_dssp             TSHHHHHHHHHHTTCCGG---GEEEEESCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHC
Confidence            346788899999999877   999999999999998888

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=94.68  E-value=0.019  Score=45.80  Aligned_cols=14  Identities=29%  Similarity=0.399  Sum_probs=13.1

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .++|+||+||||++
T Consensus         4 ~k~viFDlDGTL~d   17 (200)
T 3cnh_A            4 IKALFWDIGGVLLT   17 (200)
T ss_dssp             CCEEEECCBTTTBC
T ss_pred             ceEEEEeCCCeeEC
Confidence            57999999999998

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=94.68  E-value=0.0059  Score=50.54  Aligned_cols=32  Identities=22%  Similarity=0.324  Sum_probs=22.7

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhh
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAH   57 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~   57 (288)
                      .++|+||+||||++     +...+.+...++++++..
T Consensus         2 ~k~iiFDlDGTL~d-----~~~~~~~~~~~~~~~~~~   33 (241)
T 2hoq_A            2 VKVIFFDLDDTLVD-----TSKLAEIARKNAIENMIR   33 (241)
T ss_dssp             CCEEEECSBTTTBC-----HHHHHHHHHHHHHHHHHH
T ss_pred             ccEEEEcCCCCCCC-----ChhhHHHHHHHHHHHHHH
Confidence            47899999999998     333444556666776643

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=94.56  E-value=0.0051  Score=50.27  Aligned_cols=30  Identities=13%  Similarity=0.110  Sum_probs=19.8

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHH
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHE   54 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~   54 (288)
                      ..|+|+||+||||++.     ...+.+...+++++
T Consensus         5 ~~k~i~fD~DGTL~d~-----~~~~~~~~~~~~~~   34 (240)
T 3smv_A            5 DFKALTFDCYGTLIDW-----ETGIVNALQPLAKR   34 (240)
T ss_dssp             GCSEEEECCBTTTBCH-----HHHHHHHTHHHHHH
T ss_pred             cceEEEEeCCCcCcCC-----chhHHHHHHHHHHH
Confidence            3689999999999982     32333444444444

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=94.50  E-value=0.011  Score=48.73  Aligned_cols=71  Identities=8%  Similarity=0.029  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCC---CC----c--cceEEeCChhHH
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVP---RE----T--KALYSLRDPDEV  271 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~---~~----~--~A~~~~~~~~~v  271 (288)
                      ..|...++.+++  +++++   ++++|||+.+|+.+++.+.+.  |. ++.+..+.   ..    .  .+++++++..++
T Consensus       146 ~~K~~~~~~~~~--~~~~~---~~~~vgDs~~d~~di~~A~~a--G~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el  218 (231)
T 2p11_A          146 IHKELMLDQVME--CYPAR---HYVMVDDKLRILAAMKKAWGA--RLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDL  218 (231)
T ss_dssp             SSGGGCHHHHHH--HSCCS---EEEEECSCHHHHHHHHHHHGG--GEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGG
T ss_pred             CChHHHHHHHHh--cCCCc---eEEEEcCccchhhhhHHHHHc--CCeEEEeCCCCCCCcchhccccCCCceeecCHHHH
Confidence            356667777776  57766   999999999988888777665  44 45565441   21    1  388999998888


Q ss_pred             HHHHHHHH
Q 040896          272 MSFLRRLA  279 (288)
Q Consensus       272 ~~~l~~~~  279 (288)
                      .++|++++
T Consensus       219 ~~~l~~~~  226 (231)
T 2p11_A          219 VEMDAEWL  226 (231)
T ss_dssp             GGCGGGGC
T ss_pred             HHHHHHHH
Confidence            77776543

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=94.47  E-value=0.0071  Score=49.86  Aligned_cols=14  Identities=43%  Similarity=0.691  Sum_probs=13.1

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .++|+||+||||++
T Consensus        29 ik~iifDlDGTL~d   42 (240)
T 3sd7_A           29 YEIVLFDLDGTLTD   42 (240)
T ss_dssp             CSEEEECSBTTTEE
T ss_pred             ccEEEEecCCcCcc
Confidence            58999999999998

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=94.33  E-value=0.008  Score=49.84  Aligned_cols=14  Identities=29%  Similarity=0.413  Sum_probs=12.9

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .++|+||+||||++
T Consensus         4 ~k~viFDlDGTL~d   17 (240)
T 2hi0_A            4 YKAAIFDMDGTILD   17 (240)
T ss_dssp             CSEEEECSBTTTEE
T ss_pred             ccEEEEecCCCCcc
Confidence            47899999999999

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=94.14  E-value=0.012  Score=48.48  Aligned_cols=16  Identities=38%  Similarity=0.501  Sum_probs=14.3

Q ss_pred             CCcEEEEEecCCcccc
Q 040896           19 GKKIVVFLDYDGTLSP   34 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~   34 (288)
                      +..++|+||+||||++
T Consensus         9 ~~~k~viFDlDGTL~d   24 (231)
T 2p11_A            9 PHDIVFLFDCDNTLLD   24 (231)
T ss_dssp             CCSEEEEECCBTTTBC
T ss_pred             CCCeEEEEcCCCCCEe
Confidence            4578999999999998

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=94.05  E-value=0.011  Score=49.19  Aligned_cols=16  Identities=31%  Similarity=0.362  Sum_probs=14.3

Q ss_pred             CCcEEEEEecCCcccc
Q 040896           19 GKKIVVFLDYDGTLSP   34 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~   34 (288)
                      ...++|+||+||||++
T Consensus        21 ~~~k~iiFDlDGTL~d   36 (243)
T 2hsz_A           21 TQFKLIGFDLDGTLVN   36 (243)
T ss_dssp             SSCSEEEECSBTTTEE
T ss_pred             ccCCEEEEcCCCcCCC
Confidence            4568999999999998

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=93.64  E-value=0.013  Score=47.90  Aligned_cols=14  Identities=43%  Similarity=0.619  Sum_probs=12.8

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .++|+||+||||++
T Consensus         3 ~k~viFDlDGTL~d   16 (222)
T 2nyv_A            3 LRVILFDLDGTLID   16 (222)
T ss_dssp             ECEEEECTBTTTEE
T ss_pred             CCEEEECCCCcCCC
Confidence            47899999999998

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=93.63  E-value=0.021  Score=48.03  Aligned_cols=13  Identities=23%  Similarity=0.156  Sum_probs=12.4

Q ss_pred             EEEEEecCCcccc
Q 040896           22 IVVFLDYDGTLSP   34 (288)
Q Consensus        22 ~li~~DlDGTL~~   34 (288)
                      |+|+||+||||++
T Consensus         2 k~iiFDlDGTL~d   14 (263)
T 3k1z_A            2 RLLTWDVKDTLLR   14 (263)
T ss_dssp             CEEEECCBTTTEE
T ss_pred             cEEEEcCCCceeC
Confidence            6899999999998

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=93.41  E-value=0.024  Score=46.14  Aligned_cols=63  Identities=13%  Similarity=0.145  Sum_probs=45.1

Q ss_pred             HHHHHHHHHhcCCCCCCCceeEEEcCCcc-cHHHHHHHHhcCCceE-EEEecCCC-CccceEEeCChhHHHHHHHHHH
Q 040896          205 GRALEYLLDTFGFNNASDFLPLYIGDDKT-DEDAFKVIRHMGRGYP-IIVSSVPR-ETKALYSLRDPDEVMSFLRRLA  279 (288)
Q Consensus       205 g~al~~l~~~~~~~~~~~~~vv~~GDs~N-D~~Ml~~~~~~~~g~~-v~v~na~~-~~~A~~~~~~~~~v~~~l~~~~  279 (288)
                      ....+.+++.+|++     . ++|||+.+ |+.+-+.+     |+. +.+..... ... .+++++..++..+|.+++
T Consensus       153 ~~~~~~~~~~~~~~-----~-~~vgD~~~~Di~~a~~a-----G~~~i~v~~~~~~~~~-~~~i~~l~el~~~l~~~~  218 (220)
T 2zg6_A          153 PKIFGFALAKVGYP-----A-VHVGDIYELDYIGAKRS-----YVDPILLDRYDFYPDV-RDRVKNLREALQKIEEMN  218 (220)
T ss_dssp             CCHHHHHHHHHCSS-----E-EEEESSCCCCCCCSSSC-----SEEEEEBCTTSCCTTC-CSCBSSHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCC-----e-EEEcCCchHhHHHHHHC-----CCeEEEECCCCCCCCc-ceEECCHHHHHHHHHHhc
Confidence            35788888999986     5 99999998 99988777     664 44543321 122 456788888888887653

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=93.30  E-value=0.15  Score=42.20  Aligned_cols=53  Identities=17%  Similarity=0.080  Sum_probs=41.4

Q ss_pred             HHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCc-eEEEEecCCCCccceEEeCC
Q 040896          205 GRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRG-YPIIVSSVPRETKALYSLRD  267 (288)
Q Consensus       205 g~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g-~~v~v~na~~~~~A~~~~~~  267 (288)
                      -......++++|++++   ++++|||+.+|+.+=+.+     | .+|.|..+  ...|+.++++
T Consensus       152 p~~~~~a~~~lg~~p~---e~l~VgDs~~di~aA~~a-----G~~~I~V~~g--~~~ad~~~~~  205 (243)
T 4g9b_A          152 PEIFLAACAGLGVPPQ---ACIGIEDAQAGIDAINAS-----GMRSVGIGAG--LTGAQLLLPS  205 (243)
T ss_dssp             THHHHHHHHHHTSCGG---GEEEEESSHHHHHHHHHH-----TCEEEEESTT--CCSCSEEESS
T ss_pred             HHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHc-----CCEEEEECCC--CCcHHHhcCC
Confidence            4678888999999988   999999999999988888     5 57888755  2345555554

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=93.29  E-value=0.014  Score=50.37  Aligned_cols=60  Identities=13%  Similarity=0.093  Sum_probs=39.0

Q ss_pred             CCHHHHHHHHHHhcCC--CCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEe-------cCCC--CccceEEeC
Q 040896          202 WDKGRALEYLLDTFGF--NNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVS-------SVPR--ETKALYSLR  266 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~--~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~-------na~~--~~~A~~~~~  266 (288)
                      .+|...+.+....+..  ...   +|+++||+.||.+|++.+.+.  ..+++||       ++.+  +..|+.|+-
T Consensus       211 ~~k~~~~~k~~~~~~~~~~~~---~v~~vGDGiNDa~m~k~l~~a--dvgiaiGfl~~~v~~~~d~~~e~~Divl~  281 (297)
T 4fe3_A          211 FNKHDGALKNTDYFSQLKDNS---NIILLGDSQGDLRMADGVANV--EHILKIGYLNDRVDELLEKYMDSYDIVLV  281 (297)
T ss_dssp             TCHHHHHHTCHHHHHHTTTCC---EEEEEESSGGGGGTTTTCSCC--SEEEEEEEECSSHHHHHHHHHHHSSEEEE
T ss_pred             hhcccHHHHHHHHHHhhccCC---EEEEEeCcHHHHHHHhCcccc--CeEEEEEecchhHHHhHHHHHhhCCEEEE
Confidence            5788777665544332  334   899999999999997643221  4678887       2222  246787764

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=93.21  E-value=0.036  Score=44.56  Aligned_cols=58  Identities=10%  Similarity=0.030  Sum_probs=34.6

Q ss_pred             HHhcCCCCCCCceeEEEcCCccc----HHHHHHHH-hcCCceEEEEecCCCC--c--cceEEeCCh-hHHHHHHH
Q 040896          212 LDTFGFNNASDFLPLYIGDDKTD----EDAFKVIR-HMGRGYPIIVSSVPRE--T--KALYSLRDP-DEVMSFLR  276 (288)
Q Consensus       212 ~~~~~~~~~~~~~vv~~GDs~ND----~~Ml~~~~-~~~~g~~v~v~na~~~--~--~A~~~~~~~-~~v~~~l~  276 (288)
                      ++.++++++   +++++||+.+|    +.   .+. +.| ..+|.+.+....  .  ....++++. +++...|+
T Consensus       125 ~~~l~~~~~---~~~~vgDs~~dD~~~~~---~a~~~aG-~~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~~l~  192 (197)
T 1q92_A          125 LEQIVLTRD---KTVVSADLLIDDRPDIT---GAEPTPS-WEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILD  192 (197)
T ss_dssp             GGGEEECSC---STTSCCSEEEESCSCCC---CSCSSCS-SEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHH
T ss_pred             HHHhccCCc---cEEEECcccccCCchhh---hcccCCC-ceEEEecCcccccccccccchhhhhHHHHHHHHhc
Confidence            456677777   89999999998    53   333 221 345666654221  1  133467787 46666554

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=93.14  E-value=0.052  Score=49.92  Aligned_cols=24  Identities=21%  Similarity=0.123  Sum_probs=19.3

Q ss_pred             CCHHHHHHHHHHhhcC-CEEEEcCC
Q 040896           44 MSDTMRMAVHEVAHFF-PTAIVSGR   67 (288)
Q Consensus        44 i~~~~~~aL~~L~~~~-~v~i~TGR   67 (288)
                      +.+.+.++|++|++++ +++|+|+.
T Consensus       101 ~~~~~~~~L~~L~~~g~~~~i~Tn~  125 (555)
T 3i28_A          101 INRPMLQAALMLRKKGFTTAILTNT  125 (555)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cChhHHHHHHHHHHCCCEEEEEeCC
Confidence            3456678888999885 89999997

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=93.09  E-value=0.015  Score=49.06  Aligned_cols=17  Identities=35%  Similarity=0.456  Sum_probs=15.0

Q ss_pred             cCCcEEEEEecCCcccc
Q 040896           18 KGKKIVVFLDYDGTLSP   34 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~   34 (288)
                      ....++|+||+||||++
T Consensus        15 ~~~~k~viFDlDGTLvd   31 (260)
T 2gfh_A           15 LSRVRAVFFDLDNTLID   31 (260)
T ss_dssp             CCCCCEEEECCBTTTBC
T ss_pred             cccceEEEEcCCCCCCC
Confidence            35678999999999998

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=93.03  E-value=0.037  Score=44.69  Aligned_cols=13  Identities=38%  Similarity=0.552  Sum_probs=12.0

Q ss_pred             EEEEEecCCcccc
Q 040896           22 IVVFLDYDGTLSP   34 (288)
Q Consensus        22 ~li~~DlDGTL~~   34 (288)
                      |.|+||+||||++
T Consensus         2 kAViFD~DGTL~d   14 (216)
T 3kbb_A            2 EAVIFDMDGVLMD   14 (216)
T ss_dssp             CEEEEESBTTTBC
T ss_pred             eEEEECCCCcccC
Confidence            6799999999998

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=92.75  E-value=0.11  Score=45.46  Aligned_cols=57  Identities=16%  Similarity=0.124  Sum_probs=44.0

Q ss_pred             CcEEEEEecCCccccCcCCCC--CCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhc
Q 040896           20 KKIVVFLDYDGTLSPIVEDPD--KAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~--~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~   76 (288)
                      +++++++||||||+.....+.  .-...|.+.+.|+.+.+...++|-|......+.+.+
T Consensus       139 ~k~tLVLDLDeTLvh~~~~~~~~~~~~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vl  197 (320)
T 3shq_A          139 GKKLLVLDIDYTLFDHRSPAETGTELMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKM  197 (320)
T ss_dssp             TCEEEEECCBTTTBCSSSCCSSHHHHBCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHH
T ss_pred             CCcEEEEeccccEEcccccCCCcceEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHH
Confidence            679999999999998542111  113567889999999977789999999888777764

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=92.55  E-value=0.03  Score=46.56  Aligned_cols=14  Identities=29%  Similarity=0.446  Sum_probs=13.0

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .|.|+||+||||++
T Consensus         5 iKaViFDlDGTL~D   18 (243)
T 4g9b_A            5 LQGVIFDLDGVITD   18 (243)
T ss_dssp             CCEEEECSBTTTBC
T ss_pred             CcEEEEcCCCcccC
Confidence            68899999999998

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=92.37  E-value=0.046  Score=44.66  Aligned_cols=16  Identities=19%  Similarity=0.225  Sum_probs=14.3

Q ss_pred             CCcEEEEEecCCcccc
Q 040896           19 GKKIVVFLDYDGTLSP   34 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~   34 (288)
                      ...++|+||+||||++
T Consensus        26 ~~ik~viFD~DGTL~d   41 (229)
T 4dcc_A           26 KGIKNLLIDLGGVLIN   41 (229)
T ss_dssp             CCCCEEEECSBTTTBC
T ss_pred             CCCCEEEEeCCCeEEe
Confidence            3568999999999998

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=92.14  E-value=0.15  Score=45.58  Aligned_cols=60  Identities=12%  Similarity=0.203  Sum_probs=44.1

Q ss_pred             hcCCcEEEEEecCCccccCcCCC------------CC-----------------------CCCCHHHHHHHHHHhhcCCE
Q 040896           17 AKGKKIVVFLDYDGTLSPIVEDP------------DK-----------------------AFMSDTMRMAVHEVAHFFPT   61 (288)
Q Consensus        17 ~~~~~~li~~DlDGTL~~~~~~~------------~~-----------------------~~i~~~~~~aL~~L~~~~~v   61 (288)
                      ...+++.+++||||||++....|            ..                       -...|.+.+.|+++.+...+
T Consensus        14 ~~~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~~~yei   93 (372)
T 3ef0_A           14 RQEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISELYEL   93 (372)
T ss_dssp             HHHTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHHTTEEE
T ss_pred             HhCCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHhcCcEE
Confidence            35678999999999999853211            00                       01257788999999966689


Q ss_pred             EEEcCCChhhHhhhc
Q 040896           62 AIVSGRCLDKVSRFV   76 (288)
Q Consensus        62 ~i~TGR~~~~l~~~~   76 (288)
                      +|.|..+..-+.+++
T Consensus        94 vI~Tas~~~yA~~vl  108 (372)
T 3ef0_A           94 HIYTMGTKAYAKEVA  108 (372)
T ss_dssp             EEECSSCHHHHHHHH
T ss_pred             EEEeCCcHHHHHHHH
Confidence            999999887666654

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=91.91  E-value=0.046  Score=43.81  Aligned_cols=14  Identities=21%  Similarity=0.263  Sum_probs=13.0

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .++|+||+||||++
T Consensus         5 ~k~iiFDlDGTL~d   18 (211)
T 2i6x_A            5 IRNIVFDLGGVLIH   18 (211)
T ss_dssp             CSEEEECSBTTTEE
T ss_pred             ceEEEEeCCCeeEe
Confidence            57999999999998

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=91.79  E-value=0.057  Score=42.57  Aligned_cols=48  Identities=10%  Similarity=0.162  Sum_probs=34.0

Q ss_pred             eeEEEcCCcccHHHHHHHHhcCCceEEEEecCC-CCccceEEeCChhHHHHHHHHH
Q 040896          224 LPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVP-RETKALYSLRDPDEVMSFLRRL  278 (288)
Q Consensus       224 ~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~-~~~~A~~~~~~~~~v~~~l~~~  278 (288)
                      ..++||||.+++.  ..+     |.+|.+.... ....+.+++++..++..+|+++
T Consensus       130 ~~l~ieDs~~~i~--~aa-----G~~i~~~~~~~~~~~~~~~i~~~~el~~~l~~~  178 (180)
T 3bwv_A          130 ADYLIDDNPKQLE--IFE-----GKSIMFTASHNVYEHRFERVSGWRDVKNYFNSI  178 (180)
T ss_dssp             CSEEEESCHHHHH--HCS-----SEEEEECCGGGTTCCSSEEECSHHHHHHHHHHH
T ss_pred             ccEEecCCcchHH--HhC-----CCeEEeCCCcccCCCCceecCCHHHHHHHHHHh
Confidence            7799999999974  222     5667765432 2245778899999998887654

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=91.57  E-value=0.076  Score=42.46  Aligned_cols=14  Identities=36%  Similarity=0.641  Sum_probs=12.8

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .++++||+||||++
T Consensus         2 ~k~viFD~DGTL~d   15 (206)
T 1rku_A            2 MEIACLDLEGVLVP   15 (206)
T ss_dssp             CEEEEEESBTTTBC
T ss_pred             CcEEEEccCCcchh
Confidence            57899999999997

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=91.54  E-value=0.04  Score=45.98  Aligned_cols=17  Identities=18%  Similarity=0.352  Sum_probs=13.7

Q ss_pred             cCCcEEEEEecCCcccc
Q 040896           18 KGKKIVVFLDYDGTLSP   34 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~   34 (288)
                      +.=.|.|+||+||||++
T Consensus        23 ~~MIKaViFDlDGTLvD   39 (250)
T 4gib_A           23 NAMIEAFIFDLDGVITD   39 (250)
T ss_dssp             -CCCCEEEECTBTTTBC
T ss_pred             cchhheeeecCCCcccC
Confidence            33358899999999998

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=91.37  E-value=0.23  Score=42.61  Aligned_cols=33  Identities=12%  Similarity=0.106  Sum_probs=26.5

Q ss_pred             CCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh
Q 040896           43 FMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF   75 (288)
Q Consensus        43 ~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~   75 (288)
                      .+.+...++++.|++.+ +++++||-....+.++
T Consensus       141 ~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i  174 (297)
T 4fe3_A          141 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEV  174 (297)
T ss_dssp             CBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHH
Confidence            45677888999999885 8999999887776665

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=91.01  E-value=0.048  Score=43.03  Aligned_cols=13  Identities=38%  Similarity=0.639  Sum_probs=10.7

Q ss_pred             EEEEEecCCcccc
Q 040896           22 IVVFLDYDGTLSP   34 (288)
Q Consensus        22 ~li~~DlDGTL~~   34 (288)
                      ++++||+||||++
T Consensus        10 ~ivifDlDGTL~d   22 (201)
T 4ap9_A           10 KVAVIDIEGTLTD   22 (201)
T ss_dssp             CEEEEECBTTTBC
T ss_pred             eeEEecccCCCcc
Confidence            4455999999997

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=89.33  E-value=0.15  Score=42.00  Aligned_cols=14  Identities=36%  Similarity=0.686  Sum_probs=12.8

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .++++||+||||++
T Consensus         6 ~k~viFD~DGTL~d   19 (236)
T 2fea_A            6 KPFIICDFDGTITM   19 (236)
T ss_dssp             CEEEEECCTTTTBS
T ss_pred             CcEEEEeCCCCCCc
Confidence            57999999999996

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=87.72  E-value=0.18  Score=42.52  Aligned_cols=41  Identities=20%  Similarity=0.302  Sum_probs=32.2

Q ss_pred             HHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEe
Q 040896          205 GRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVS  253 (288)
Q Consensus       205 g~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~  253 (288)
                      ......+++.+|++++   ++++|||+.+|+..=+.+     |. ++.+.
T Consensus       190 p~~~~~a~~~lg~~p~---~~l~vgDs~~di~aA~~a-----G~~~i~v~  231 (253)
T 2g80_A          190 TQSYANILRDIGAKAS---EVLFLSDNPLELDAAAGV-----GIATGLAS  231 (253)
T ss_dssp             HHHHHHHHHHHTCCGG---GEEEEESCHHHHHHHHTT-----TCEEEEEC
T ss_pred             HHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHc-----CCEEEEEc
Confidence            5677888899999988   999999999997765555     54 45553

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=87.31  E-value=0.88  Score=40.78  Aligned_cols=65  Identities=20%  Similarity=0.098  Sum_probs=47.2

Q ss_pred             HHHHHHHHhcC--------------CCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCC---------Cccc
Q 040896          206 RALEYLLDTFG--------------FNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPR---------ETKA  261 (288)
Q Consensus       206 ~al~~l~~~~~--------------~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~---------~~~A  261 (288)
                      ......++.++              ++++   ++++|||+.+|+.+-+.+     |. +|.+..+..         ...|
T Consensus       288 ~~~~~a~~~lg~~~~~~~~~~~~~~v~p~---e~l~VGDs~~Di~aAk~A-----G~~~I~V~~g~~~~~~~~~l~~~~a  359 (384)
T 1qyi_A          288 FSYIAALYGNNRDKYESYINKQDNIVNKD---DVFIVGDSLADLLSAQKI-----GATFIGTLTGLKGKDAAGELEAHHA  359 (384)
T ss_dssp             HHHHHHHHCCCGGGHHHHHHCCTTCSCTT---TEEEEESSHHHHHHHHHH-----TCEEEEESCBTTBGGGHHHHHHTTC
T ss_pred             HHHHHHHHHcCCccccccccccccCCCCc---CeEEEcCCHHHHHHHHHc-----CCEEEEECCCccccccHHHHhhcCC
Confidence            34556667777              6766   999999999999988888     54 466654421         1258


Q ss_pred             eEEeCChhHHHHHHHHH
Q 040896          262 LYSLRDPDEVMSFLRRL  278 (288)
Q Consensus       262 ~~~~~~~~~v~~~l~~~  278 (288)
                      ++++++..++...|+..
T Consensus       360 d~vi~sl~eL~~~l~~~  376 (384)
T 1qyi_A          360 DYVINHLGELRGVLDNL  376 (384)
T ss_dssp             SEEESSGGGHHHHHSCT
T ss_pred             CEEECCHHHHHHHHHHH
Confidence            89999998888777543

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=87.23  E-value=0.29  Score=42.64  Aligned_cols=32  Identities=19%  Similarity=0.096  Sum_probs=25.1

Q ss_pred             CCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh
Q 040896           44 MSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF   75 (288)
Q Consensus        44 i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~   75 (288)
                      +.+.+.++|+.|++.+ +++++||.+...+...
T Consensus       179 ~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~  211 (335)
T 3n28_A          179 LMPELPELVATLHAFGWKVAIASGGFTYFSDYL  211 (335)
T ss_dssp             CCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHH
T ss_pred             cCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHH
Confidence            4566778899999885 8999999887766654

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=87.13  E-value=0.28  Score=41.77  Aligned_cols=15  Identities=33%  Similarity=0.363  Sum_probs=13.4

Q ss_pred             cEEEEEecCCccccC
Q 040896           21 KIVVFLDYDGTLSPI   35 (288)
Q Consensus        21 ~~li~~DlDGTL~~~   35 (288)
                      .+.++||+||||++.
T Consensus        32 i~~viFD~dGTL~ds   46 (287)
T 3a1c_A           32 VTAVIFDKTGTLTKG   46 (287)
T ss_dssp             CCEEEEECCCCCBCS
T ss_pred             CCEEEEeCCCCCcCC
Confidence            578999999999983

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=86.73  E-value=0.23  Score=41.80  Aligned_cols=58  Identities=12%  Similarity=0.115  Sum_probs=42.0

Q ss_pred             HHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCC-C--C---ccceEEeCChhH
Q 040896          205 GRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVP-R--E---TKALYSLRDPDE  270 (288)
Q Consensus       205 g~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~-~--~---~~A~~~~~~~~~  270 (288)
                      ....+.+++.+|++++   ++++|||+.+|+..-+.+     |. +|.+.... .  .   ..+++++++..+
T Consensus       190 p~~~~~~~~~lg~~p~---~~l~VgDs~~di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~i~~l~e  254 (261)
T 1yns_A          190 SESYRKIADSIGCSTN---NILFLTDVTREASAAEEA-----DVHVAVVVRPGNAGLTDDEKTYYSLITSFSE  254 (261)
T ss_dssp             HHHHHHHHHHHTSCGG---GEEEEESCHHHHHHHHHT-----TCEEEEECCTTCCCCCHHHHHHSCEESSGGG
T ss_pred             HHHHHHHHHHhCcCcc---cEEEEcCCHHHHHHHHHC-----CCEEEEEeCCCCCcccccccCCCEEECCHHH
Confidence            3677888999999887   999999999999877777     54 56664421 1  1   246677776544

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=86.08  E-value=0.4  Score=38.66  Aligned_cols=15  Identities=27%  Similarity=0.408  Sum_probs=13.3

Q ss_pred             cEEEEEecCCccccC
Q 040896           21 KIVVFLDYDGTLSPI   35 (288)
Q Consensus        21 ~~li~~DlDGTL~~~   35 (288)
                      .++++||+||||++.
T Consensus         3 ~k~viFDlDGTL~d~   17 (220)
T 2zg6_A            3 YKAVLVDFGNTLVGF   17 (220)
T ss_dssp             CCEEEECSBTTTEEE
T ss_pred             ceEEEEcCCCceecc
Confidence            578999999999983

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=85.53  E-value=0.54  Score=39.42  Aligned_cols=15  Identities=40%  Similarity=0.778  Sum_probs=13.7

Q ss_pred             CcEEEEEecCCcccc
Q 040896           20 KKIVVFLDYDGTLSP   34 (288)
Q Consensus        20 ~~~li~~DlDGTL~~   34 (288)
                      ..+.++||+||||++
T Consensus         9 ~ikaviFDlDGTL~d   23 (261)
T 1yns_A            9 EVTVILLDIEGTTTP   23 (261)
T ss_dssp             TCCEEEECCBTTTBC
T ss_pred             CCCEEEEecCCCccc
Confidence            478999999999998

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=84.77  E-value=0.52  Score=41.33  Aligned_cols=45  Identities=20%  Similarity=0.032  Sum_probs=29.8

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCC-cccHHHHHHHHhcCCceEEEE
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDD-KTDEDAFKVIRHMGRGYPIIV  252 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs-~ND~~Ml~~~~~~~~g~~v~v  252 (288)
                      +-.|..+|+..+.. +-  .   .+++|||| .+|.+||..+... .|+++.+
T Consensus       239 ~~GK~~~I~~~i~~-g~--~---Pi~a~Gns~dgD~~ML~~~~~~-~~~~L~i  284 (327)
T 4as2_A          239 MAGKQAAILTYIDR-WK--R---PILVAGDTPDSDGYMLFNGTAE-NGVHLWV  284 (327)
T ss_dssp             THHHHHHHHHHTCS-SC--C---CSEEEESCHHHHHHHHHHTSCT-TCEEEEE
T ss_pred             cCccHHHHHHHHhh-CC--C---CeEEecCCCCCCHHHHhccccC-CCeEEEE
Confidence            34577777776632 22  2   78999999 6899999886432 2455543

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=84.72  E-value=0.2  Score=39.40  Aligned_cols=43  Identities=23%  Similarity=0.249  Sum_probs=31.0

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceE-EEEec
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYP-IIVSS  254 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~-v~v~n  254 (288)
                      |...++.+++.++++++   ++++|||+.+|+.+-+.+     |+. +.+..
T Consensus       118 ~p~~~~~~~~~~gi~~~---~~l~VGD~~~Di~~A~~a-----G~~~i~v~~  161 (176)
T 2fpr_A          118 KVKLVERYLAEQAMDRA---NSYVIGDRATDIQLAENM-----GINGLRYDR  161 (176)
T ss_dssp             SCGGGGGGC----CCGG---GCEEEESSHHHHHHHHHH-----TSEEEECBT
T ss_pred             CHHHHHHHHHHcCCCHH---HEEEEcCCHHHHHHHHHc-----CCeEEEEcC
Confidence            45677788888999877   999999999999999888     654 55543

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=81.54  E-value=1.1  Score=40.73  Aligned_cols=41  Identities=17%  Similarity=0.306  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEE
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV  252 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v  252 (288)
                      +....+.+++++|++++   ++++|||+.+|+.+-+.+     |+....
T Consensus       162 ~p~~~~~~~~~lg~~p~---~~~~v~D~~~di~~a~~a-----G~~~~~  202 (555)
T 3i28_A          162 EPQIYKFLLDTLKASPS---EVVFLDDIGANLKPARDL-----GMVTIL  202 (555)
T ss_dssp             CHHHHHHHHHHHTCCGG---GEEEEESCHHHHHHHHHH-----TCEEEE
T ss_pred             CHHHHHHHHHHcCCChh---HEEEECCcHHHHHHHHHc-----CCEEEE
Confidence            35688999999999987   999999999999999988     665443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	288
d1u02a_	229	c.108.1.15 (A:) Trehalose-6-phosphate phosphatase	5e-32
d2amya1	243	c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (	2e-10
d1xvia_	232	c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera	3e-06
d2rbka1	260	c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B	2e-05
d2fuea1	244	c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human	3e-05
d1s2oa1	244	c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {	2e-04
d1wzca1	243	c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl	0.003

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score =  116 bits (290), Expect = 5e-32
 Identities = 54/263 (20%), Positives = 99/263 (37%), Gaps = 39/263 (14%)

Query: 24  VFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKNVVY 83
           +FLDYDGTL PI+ +P++++    +   + ++   F T IV+GR  +++SRF+ L   + 
Sbjct: 3   IFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEISRFLPLDINMI 62

Query: 84  AGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKT 143
                                       +   ++V+   +  FL     + +     +  
Sbjct: 63  CYHGA---------------------CSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVSD 101

Query: 144 IKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWD 203
             G  +      +  H   +  D    L+  +  I   +       GK ++E+R     +
Sbjct: 102 FPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFG-VETYYGKMIIELRV-PGVN 159

Query: 204 KGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRETKALY 263
           KG A+  +          +   +  GDD TDE AF+          I V     ET A +
Sbjct: 160 KGSAIRSVRG--------ERPAIIAGDDATDEAAFEAN---DDALTIKVG--EGETHAKF 206

Query: 264 SLRDPDEVMSFLRRLAR---WKK 283
            + D  E+   L+ +      KK
Sbjct: 207 HVADYIEMRKILKFIEMLGVQKK 229

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 243

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (137), Expect = 2e-10
 Identities = 38/270 (14%), Positives = 78/270 (28%), Gaps = 40/270 (14%)

Query: 19  GKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQL 78
           G  + +F D DGTL+       +  ++  M   + ++       +V G   +KV   +  
Sbjct: 2   GPALCLF-DVDGTLTA-----PRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGN 55

Query: 79  KN-----VVYAGSHGMDISTPAGSLKQNNPKHETRTV-DEQGNEVVHFQPAQEFLPQIQE 132
                   V+  +  +         +QN   H    +  +  N  + +    +   +   
Sbjct: 56  DVVEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGT 115

Query: 133 MIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKK 192
            I+     +           +  I  +     E+        +             GG+ 
Sbjct: 116 FIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQI 175

Query: 193 VMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKT----DEDAFKVIRHMGRGY 248
             ++ P   WDK   L ++ +    +        + GD       D + F   R MG   
Sbjct: 176 SFDVFP-DGWDKRYCLRHVEN----DGYKTI--YFFGDKTMPGGNDHEIFTDPRTMG--- 225

Query: 249 PIIVSSVPRETKALYSLRDPDEVMSFLRRL 278
                         YS+  P++       L
Sbjct: 226 --------------YSVTAPEDTRRICELL 241

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

 Score = 45.1 bits (105), Expect = 3e-06
 Identities = 29/237 (12%), Positives = 66/237 (27%), Gaps = 15/237 (6%)

Query: 20  KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV-AHFFPTAIVSGRCL---DKVSRF 75
           + ++VF D DGTL         ++        +  +     P  + S +       + + 
Sbjct: 3   QPLLVFSDLDGTLL-----DSHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKT 57

Query: 76  VQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQ 135
           + L+ +     +G  I       + +        +      +V     ++   +      
Sbjct: 58  LGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDD 117

Query: 136 VLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVME 195
           V +  I    G +              V     ++ + M                     
Sbjct: 118 VDDATIAEWTGLSRSQAALTQLHEA-SVTLIWRDSDERMAQFTARLNELGLQFMQGARFW 176

Query: 196 IRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV 252
                   K +A  +++ T+   +      L +GD   D    +V+      Y +IV
Sbjct: 177 HVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVM-----DYAVIV 228

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

 Score = 42.6 bits (99), Expect = 2e-05
 Identities = 35/275 (12%), Positives = 81/275 (29%), Gaps = 39/275 (14%)

Query: 23  VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV-AHFFPTAIVSGRCLDKVSRFVQLKN- 80
            +F D DGTL       +   +  +   A+    A      I +GR    ++   +L++ 
Sbjct: 3   ALFFDIDGTLV----SFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQDR 58

Query: 81  ------VVYAGSHGMD--ISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQE 132
                 +   G++           ++ Q   K      +++G   +  +     + Q  E
Sbjct: 59  NLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNE 118

Query: 133 MIQVLEEKIKTIKGATVED-----NKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRI 187
           M++ +      +            NK  I +     +E++   L  +             
Sbjct: 119 MVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPT-------CEIG 171

Query: 188 SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRG 247
                  ++       K + ++ ++  FG         +  GD   D    +        
Sbjct: 172 RWYPAFADVTAK-GDTKQKGIDEIIRHFGIKLEE---TMSFGDGGNDISMLRHA-----A 222

Query: 248 YPIIVSSVPRETKAL--YSLRDPDE--VMSFLRRL 278
             + +     + KA   Y     DE  +   ++  
Sbjct: 223 IGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 257

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (98), Expect = 3e-05
 Identities = 30/237 (12%), Positives = 70/237 (29%), Gaps = 24/237 (10%)

Query: 21  KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKV-----SRF 75
           +++   D DGTL+     P +  +   +   + ++       +V G    K+        
Sbjct: 1   RVLCLFDVDGTLT-----PARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGD 55

Query: 76  VQLKNVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQ 135
             ++   Y  +    +    G L            +   + +         L   ++   
Sbjct: 56  EVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGT 115

Query: 136 VLEEKIKTIKGATVEDNKFC---ISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKK 192
            +E +   +  + +  +      I        E       E + +           GG  
Sbjct: 116 FIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMI 175

Query: 193 VMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKT----DEDAFKVIRHMG 245
             ++ P   WDK   L+ L      ++       + G++ +    D + F   R +G
Sbjct: 176 SFDVFP-EGWDKRYCLDSLDQ----DSFDTI--HFFGNETSPGGNDFEIFADPRTVG 225

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

 Score = 40.0 bits (92), Expect = 2e-04
 Identities = 36/253 (14%), Positives = 71/253 (28%), Gaps = 33/253 (13%)

Query: 20  KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLK 79
           +++++  D D T     +        + ++  + +    F  A  +GR         +  
Sbjct: 2   RQLLLISDLDNTWVGDQQAL------EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQV 55

Query: 80  NVVYAGSHGMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEE 139
            ++                        +     +G +        E   Q   +  + + 
Sbjct: 56  GLMEPDYWLTA--------------VGSEIYHPEGLDQHWADYLSEHW-QRDILQAIADG 100

Query: 140 KIKTIKGATVEDNKFCISVHFRR-VDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRP 198
                  + +E N + IS H         I+ L EM+            SG    +++ P
Sbjct: 101 FEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGK--DVDLLP 158

Query: 199 CIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE 258
               +KG A +YL        +     L  GD   D   F+          +IV +   E
Sbjct: 159 Q-RSNKGNATQYLQQHLAMEPSQ---TLVCGDSGNDIGLFETS-----ARGVIVRNAQPE 209

Query: 259 TKALYSLRDPDEV 271
               Y        
Sbjct: 210 LLHWYDQWGDSRH 222

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 35.8 bits (81), Expect = 0.003
 Identities = 45/256 (17%), Positives = 79/256 (30%), Gaps = 23/256 (8%)

Query: 23  VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEV-AHFFPTAIVSGRCLDKVSRFVQ--LK 79
           ++FLD D TL P        +  D  +  + E+    F     S +   +   + +    
Sbjct: 4   LIFLDIDKTLIP-------GYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEV 56

Query: 80  NVVYAGSHGMDISTPAGSL--KQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVL 137
              +   +G  I  P G         +     V E G  V   +   + L  I  +    
Sbjct: 57  ETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYG 116

Query: 138 EEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIR 197
               + I+  T    +       R   E          +   E                 
Sbjct: 117 NSTKEEIEKFTGMPPELVPLAMEREYSETIFE---WSRDGWEEVLVEGGFKVTMGSRFYT 173

Query: 198 PCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV-SSVP 256
              + DKG+A + LLD +      +     +GD   D   F+V+         IV S   
Sbjct: 174 VHGNSDKGKAAKILLDFYKRLGQIES--YAVGDSYNDFPMFEVV-----DKVFIVGSLKH 226

Query: 257 RETKALYSLRDPDEVM 272
           ++ + + S+ D  EV+
Sbjct: 227 KKAQNVSSIIDVLEVI 242

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	288
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	100.0
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	100.0
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	100.0
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	100.0
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	100.0
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	100.0
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.97
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	99.97
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.96
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	99.96
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	99.96
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	99.95
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	99.92
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	99.92
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	99.62
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	99.28
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.05
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	98.93
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	98.9
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	98.77
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	98.33
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.25
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	98.2
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	97.98
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.95
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.83
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	97.79
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	97.68
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	97.28
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	97.12
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	97.0
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	96.99
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	96.95
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	96.94
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	96.81
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	96.76
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	96.56
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	96.49
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	96.46
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	96.41
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	96.36
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	96.29
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	96.23
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	95.97
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	95.93
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	95.83
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	95.73
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	95.62
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	95.22
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	95.19
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	95.09
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	95.09
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	95.04
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	94.88
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	94.8
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	94.69
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	94.6
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	94.57
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	94.26
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	93.72
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	93.67
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	93.13
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	92.92
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	92.88
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	92.87
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	91.88
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	91.8
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	91.2
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	90.96
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	90.78
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	90.74
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	90.72
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	90.09
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	90.01
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	88.95
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	88.89
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	88.79
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	88.33
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	88.09
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	87.3
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	86.83
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	86.15
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	85.86

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=100.00  E-value=6.5e-38  Score=262.91  Aligned_cols=226  Identities=24%  Similarity=0.384  Sum_probs=175.4

Q ss_pred             EEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhcCCCCeEEEccCceeEeCCCCCcccC
Q 040896           22 IVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQLKNVVYAGSHGMDISTPAGSLKQN  101 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~~~~~~~~i~~nGa~i~~~~~~~~~~  101 (288)
                      .||||||||||+++..+|+.+.++++++++|++|++.+.|+|||||++..+...... ..+++++||+.+..++..... 
T Consensus         1 ~Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~~~~v~i~TGR~~~~l~~~~~~-~~~~~~~ng~~~~~~~~~~~~-   78 (229)
T d1u02a_           1 SLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEISRFLPL-DINMICYHGACSKINGQIVYN-   78 (229)
T ss_dssp             CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHHSEEEEECSSCHHHHHHHSCS-SCEEEEGGGTEEEETTEEEEC-
T ss_pred             CEEEEEecCCCCCCCCChhhCCCCHHHHHHHHHHhhCCCEEEEcCCCHHHhhhhcCc-cccEEecCeEEEecCCceeee-
Confidence            389999999999877667788899999999999998888999999999999887754 357999999988876543221 


Q ss_pred             CCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCCcccHHHHHHHHHHHHHh
Q 040896          102 NPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNSIVEA  181 (288)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  181 (288)
                                         ........+++.+.+.+..+....++.....+.....+++............+.+++.+..
T Consensus        79 -------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  139 (229)
T d1u02a_          79 -------------------NGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARI  139 (229)
T ss_dssp             -------------------TTGGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHH
T ss_pred             -------------------cchhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhhhHHHHHHHHHHHhhc
Confidence                               1111222445566666655555678888888888888887765544445556666666665


Q ss_pred             CCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCCccc
Q 040896          182 YPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRETKA  261 (288)
Q Consensus       182 ~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~~~A  261 (288)
                      . .+.+.++..++||+|+ |+|||+|+++|+++     +   ++++||||.||++||+.+.   +||+|+|||  .+++|
T Consensus       140 ~-~~~~~~~~~~idi~p~-g~~Kg~al~~l~~~-----~---~~i~~GDs~ND~~Mf~~~~---~~~av~~g~--~~~~A  204 (229)
T d1u02a_         140 F-GVETYYGKMIIELRVP-GVNKGSAIRSVRGE-----R---PAIIAGDDATDEAAFEAND---DALTIKVGE--GETHA  204 (229)
T ss_dssp             H-TCEEEECSSEEEEECT-TCCHHHHHHHHHTT-----S---CEEEEESSHHHHHHHHTTT---TSEEEEESS--SCCCC
T ss_pred             C-CeEEEeeceEEEEecC-CCCHHHHHHHHhcc-----c---cceeecCCCChHHHHhccC---CeEEEEeCC--CCccC
Confidence            5 4777888899999999 99999999999864     3   8899999999999999994   356666554  46899


Q ss_pred             eEEeCChhHHHHHHHHH--HHHhh
Q 040896          262 LYSLRDPDEVMSFLRRL--ARWKK  283 (288)
Q Consensus       262 ~~~~~~~~~v~~~l~~~--~~~~~  283 (288)
                      +|+++++++|+++|+.+  ++.++
T Consensus       205 ~~~~~~~~ev~~~l~~l~~~~~~~  228 (229)
T d1u02a_         205 KFHVADYIEMRKILKFIEMLGVQK  228 (229)
T ss_dssp             SEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             eEEcCCHHHHHHHHHHHHHHHhhc
Confidence            99999999999999877  55554

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-33  Score=242.96  Aligned_cols=240  Identities=14%  Similarity=0.239  Sum_probs=152.0

Q ss_pred             cEEEEEecCCccccCcCCCCCCCC-CHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcC-C-CCeEEEccCceeEeCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFM-SDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ-L-KNVVYAGSHGMDISTPAG   96 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i-~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~-~-~~~~~i~~nGa~i~~~~~   96 (288)
                      .|+||||+||||+++     .+.+ ++.++++|++|++++ .|++||||++..+.+++. + ...++|++||+.|+.++.
T Consensus         2 IKli~~DlDGTLl~~-----~~~~~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~   76 (269)
T d1rlma_           2 VKVIVTDMDGTFLND-----AKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGK   76 (269)
T ss_dssp             CCEEEECCCCCCSCT-----TSCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTE
T ss_pred             EEEEEEeCCccCcCC-----CCcCChHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCc
Confidence            689999999999983     4445 478999999999995 899999999999998874 2 236899999999998655


Q ss_pred             CcccCCC-CCc-c----cccccCCCceeccCCCccch--hHHHHHHHHHHHHhhccCCe-EEEe----cC--ceEEEecc
Q 040896           97 SLKQNNP-KHE-T----RTVDEQGNEVVHFQPAQEFL--PQIQEMIQVLEEKIKTIKGA-TVED----NK--FCISVHFR  161 (288)
Q Consensus        97 ~~~~~~~-~~~-~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~e~----~~--~~~~~~~~  161 (288)
                      .....+. ... .    ......+...........+.  ...+........   ..... ...+    ..  +.+.+.  
T Consensus        77 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--  151 (269)
T d1rlma_          77 QLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAK---HYHRLKPVKDYQEIDDVLFKFSLN--  151 (269)
T ss_dssp             EEEECCCCHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHT---TCSSEEEESCGGGCCSCEEEEEEE--
T ss_pred             EEEEeccchHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHh---hcccccccccHhhhcchheEEEec--
Confidence            4322110 000 0    00000000000000000000  000111111111   01110 0000    00  111111  


Q ss_pred             CCCcccHHHHHHHHHHHHHhCC-Ce-EEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHH
Q 040896          162 RVDEDDINTLQEMVNSIVEAYP-NF-RISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFK  239 (288)
Q Consensus       162 ~~~~~~~~~~~~~l~~~~~~~~-~~-~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~  239 (288)
                       ...+......+.+.   .... .+ .+.++..++||+|+ ++|||.|+++|++++|++.+   ++++||||.||++||+
T Consensus       152 -~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~di~p~-~~sK~~al~~l~~~lgi~~~---~vi~~GD~~ND~~Ml~  223 (269)
T d1rlma_         152 -LPDEQIPLVIDKLH---VALDGIMKPVTSGFGFIDLIIP-GLHKANGISRLLKRWDLSPQ---NVVAIGDSGNDAEMLK  223 (269)
T ss_dssp             -CCGGGHHHHHHHHH---HHTTTSSEEEECSTTEEEEECT-TCSHHHHHHHHHHHHTCCGG---GEEEEECSGGGHHHHH
T ss_pred             -CCHHHHHHHHHHHH---HHhhcceEEEEEcCceEEEecC-chHHHHHHHHHhhhhccccc---cEEEEcCCcchHHHHH
Confidence             11122222223332   2232 23 34677899999999 99999999999999999987   9999999999999999


Q ss_pred             HHHhcCCceEEEEecCCC--CccceEEeCC--hhHHHHHHHHHHHHhh
Q 040896          240 VIRHMGRGYPIIVSSVPR--ETKALYSLRD--PDEVMSFLRRLARWKK  283 (288)
Q Consensus       240 ~~~~~~~g~~v~v~na~~--~~~A~~~~~~--~~~v~~~l~~~~~~~~  283 (288)
                      .+     |+||+|+||.+  +.+|+|++.+  .+||+++|++++..+.
T Consensus       224 ~a-----g~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~~~  266 (269)
T d1rlma_         224 MA-----RYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTY  266 (269)
T ss_dssp             HC-----SEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTCT
T ss_pred             hC-----CeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhcCC
Confidence            99     89999999987  4789999875  6789999999998653

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=100.00  E-value=5.4e-34  Score=247.47  Aligned_cols=243  Identities=15%  Similarity=0.128  Sum_probs=150.5

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcC-C-CCeEEEccCceeEeCCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ-L-KNVVYAGSHGMDISTPAGS   97 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~-~-~~~~~i~~nGa~i~~~~~~   97 (288)
                      .|+|||||||||++     +++.++++++++|++|++++ .|++||||++..+.+++. + ...++|++||+.|+.+++.
T Consensus         1 iKli~~DlDGTLl~-----~~~~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~   75 (285)
T d1nrwa_           1 MKLIAIDLDGTLLN-----SKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGR   75 (285)
T ss_dssp             CCEEEEECCCCCSC-----TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCC
T ss_pred             CeEEEEECCccccC-----CCCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCc
Confidence            47999999999998     46789999999999999995 899999999999988763 2 2368999999999987655


Q ss_pred             cccCCC--CCcc-c---ccccCCCceeccCC-----CccchhHHHHHHHHHH------------HHh---hccCCeEEEe
Q 040896           98 LKQNNP--KHET-R---TVDEQGNEVVHFQP-----AQEFLPQIQEMIQVLE------------EKI---KTIKGATVED  151 (288)
Q Consensus        98 ~~~~~~--~~~~-~---~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~------------~~~---~~~~~~~~e~  151 (288)
                      ......  .... +   .+...+........     ..............+.            ...   ..........
T Consensus        76 ~i~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (285)
T d1nrwa_          76 LYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYIN  155 (285)
T ss_dssp             EEEECCCCHHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEECS
T ss_pred             eeeeccCCHHHHHHHHHHHHHcCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhhhhhhhhhccccceeec
Confidence            332100  0000 0   00000000000000     0000000111111000            000   0000000000


Q ss_pred             --------cCceEEEeccCCCcccHHHHHHHHHHHHHhCCCeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCC
Q 040896          152 --------NKFCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASD  222 (288)
Q Consensus       152 --------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~  222 (288)
                              ............. .. ..............+++.+ .+++.++||+|+ ++|||+|+++|++++|++.+  
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~s~~~~ldi~~~-~~~K~~ai~~l~~~~gi~~~--  230 (285)
T d1nrwa_         156 SFQELFEADEPIDFYNILGFS-FF-KEKLEAGWKRYEHAEDLTLVSSAEHNFELSSR-KASKGQALKRLAKQLNIPLE--  230 (285)
T ss_dssp             CGGGGTSSSSCCCEEEEEEEC-SC-HHHHHHHHHHHTTCTTEEEECSSTTEEEEEET-TCSHHHHHHHHHHHTTCCGG--
T ss_pred             hHHHHhhcccchhheeeeccc-ch-HHHHHHHHHHhhcCCCeEEEEeCCcEEEEecc-cchhhhHHHHHHhhcccCcc--
Confidence                    0000000000000 01 1111222222233345765 567899999999 99999999999999999987  


Q ss_pred             ceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHHH
Q 040896          223 FLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRLA  279 (288)
Q Consensus       223 ~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~~  279 (288)
                       ++++||||.||++||+.+     |+||+|+||.++  ..|+|++.+  .+||+++|++++
T Consensus       231 -~vi~~GD~~ND~~Ml~~a-----~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~ll  285 (285)
T d1nrwa_         231 -ETAAVGDSLNDKSMLEAA-----GKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHLL  285 (285)
T ss_dssp             -GEEEEESSGGGHHHHHHS-----SEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHTC
T ss_pred             -cEEEEeCCHHHHHHHHhC-----CeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHhC
Confidence             999999999999999999     899999999874  689999875  679999998863

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=100.00  E-value=4.8e-34  Score=245.44  Aligned_cols=221  Identities=14%  Similarity=0.185  Sum_probs=150.7

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CC-CCeEEEccCceeEeCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QL-KNVVYAGSHGMDISTPA   95 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~-~~~~~i~~nGa~i~~~~   95 (288)
                      .|+|||||||||+++    +.+.++++++++|++|++.+ .|++||||++..+..+.   .. ...++||+||++|+.++
T Consensus         1 ~k~if~DlDGTL~~~----~~~~i~~~~~~al~~l~~~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~   76 (260)
T d2rbka1           1 TKALFFDIDGTLVSF----ETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGE   76 (260)
T ss_dssp             CCEEEECSBTTTBCT----TTSSCCHHHHHHHHHHHHTTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETT
T ss_pred             CeEEEEECCCCCcCC----CCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHhcCCCCceEecCCcccccCc
Confidence            379999999999984    35679999999999999995 89999999998877542   22 34679999999999865


Q ss_pred             CCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEe----------c---cC
Q 040896           96 GSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVH----------F---RR  162 (288)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~----------~---~~  162 (288)
                      +....                   .....   .....+.+.+...  ...-.............          +   ..
T Consensus        77 ~~i~~-------------------~~l~~---~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (260)
T d2rbka1          77 EVIYK-------------------SAIPQ---EEVKAMAAFCEKK--GVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNV  132 (260)
T ss_dssp             EEEEE-------------------CCCCH---HHHHHHHHHHHHH--TCCEEEECSSCEEEESCCHHHHHHTTTTTCCCC
T ss_pred             ccccc-------------------cCCCH---HHHHHHHHHHHHc--CCcEEEEecCceeeccchHHHHHHHHHhhccCc
Confidence            43221                   00111   1233333333321  11111111111000000          0   00


Q ss_pred             CCcccHHH-------------HHHHHHHHHHhCCCeEEe-CCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEE
Q 040896          163 VDEDDINT-------------LQEMVNSIVEAYPNFRIS-GGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYI  228 (288)
Q Consensus       163 ~~~~~~~~-------------~~~~l~~~~~~~~~~~~~-~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~  228 (288)
                      .+.....+             ..+...++++.++.+.+. +++.++||+|+ ++|||.|+++|+++++++.+   ++++|
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~p~-~~sK~~al~~l~~~~~i~~~---~~~a~  208 (260)
T d2rbka1         133 IPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAFADVTAK-GDTKQKGIDEIIRHFGIKLE---ETMSF  208 (260)
T ss_dssp             CCBCCHHHHHTSCCSEEEECCCHHHHHHHGGGSTTCEEECSSTTCCEEEST-TCSHHHHHHHHHHHHTCCGG---GEEEE
T ss_pred             CcccCHhHhcCcceEEEeecCCHHHHHHHHHHhccccceeecCcEEEEEeC-CCCHHHHHHHHHHhccccHh---heeEe
Confidence            00000000             012233455666666664 56789999999 99999999999999999987   99999


Q ss_pred             cCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHH
Q 040896          229 GDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRL  278 (288)
Q Consensus       229 GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~  278 (288)
                      |||.||++||+.+     |+||+|+||.++  .+|+|++.+  .+||+++|+++
T Consensus       209 GD~~ND~~Ml~~a-----~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~~  257 (260)
T d2rbka1         209 GDGGNDISMLRHA-----AIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF  257 (260)
T ss_dssp             ECSGGGHHHHHHS-----SEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred             cCCcccHHHHHhC-----CeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHHh
Confidence            9999999999999     899999999874  689999875  67999999885

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.6e-33  Score=243.00  Aligned_cols=218  Identities=17%  Similarity=0.215  Sum_probs=149.2

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAGS   97 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~~   97 (288)
                      .|+||||+||||++     +++.++++++++|++|++.+.+++||||++..+.+.+   +....++||+||+.|+.+++.
T Consensus         2 ~Kli~~DlDGTL~~-----~~~~i~~~~~~al~~l~~~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~   76 (267)
T d1nf2a_           2 YRVFVFDLDGTLLN-----DNLEISEKDRRNIEKLSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEG   76 (267)
T ss_dssp             BCEEEEECCCCCSC-----TTSCCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTE
T ss_pred             eEEEEEeCCccccC-----CcCccCHHHHHHHHHHHcCCEEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEecccc
Confidence            37999999999998     5678999999999999987889999999999888865   334567999999999987654


Q ss_pred             cccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHH------------------------h--hccCCeEEEe
Q 040896           98 LKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEK------------------------I--KTIKGATVED  151 (288)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~--~~~~~~~~e~  151 (288)
                      .... ..                 ...   .....+.+.+...                        .  ...+. ....
T Consensus        77 ~i~~-~~-----------------i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  134 (267)
T d1nf2a_          77 VILN-EK-----------------IPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDY-RVEP  134 (267)
T ss_dssp             EEEE-CC-----------------BCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCE-EECT
T ss_pred             cccc-cC-----------------CCH---HHHHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCc-eecC
Confidence            3210 00                 000   1111111111110                        0  00000 0000


Q ss_pred             -------cCceEEEeccCCCcccHHHHHHHHHHHHH-hCC-CeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCC
Q 040896          152 -------NKFCISVHFRRVDEDDINTLQEMVNSIVE-AYP-NFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNAS  221 (288)
Q Consensus       152 -------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~-~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~  221 (288)
                             +.....+... .+    .+..+.+.+.+. .++ .+.+ .++..++||+|+ ++|||.||++|+++++++.+ 
T Consensus       135 ~~~~~~~~~~~~~i~~~-~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~di~~~-~~~K~~ai~~l~~~~~i~~~-  207 (267)
T d1nf2a_         135 NLSELVSKMGTTKLLLI-DT----PERLDELKEILSERFKDVVKVFKSFPTYLEIVPK-NVDKGKALRFLRERMNWKKE-  207 (267)
T ss_dssp             THHHHHHHHCBSEEEEE-CC----HHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECT-TCCHHHHHHHHHHHHTCCGG-
T ss_pred             cHHHHhhhccceEEEEe-cc----HHHHHHHHHHHHHhhCCcEEEEEeecceeeecCC-CCchhHHHHHHHHhhccCcc-
Confidence                   0000001111 01    122333433333 223 2554 567899999999 99999999999999999987 


Q ss_pred             CceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeC--ChhHHHHHHHHHH
Q 040896          222 DFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLR--DPDEVMSFLRRLA  279 (288)
Q Consensus       222 ~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~--~~~~v~~~l~~~~  279 (288)
                        ++++||||.||++||+.+     |+||+|+||.++  .+|++++.  +.+||+++|++++
T Consensus       208 --~vva~GD~~ND~~ml~~~-----~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ll  262 (267)
T d1nf2a_         208 --EIVVFGDNENDLFMFEEA-----GLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS  262 (267)
T ss_dssp             --GEEEEECSHHHHHHHTTC-----SEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred             --cEEEEcCCcchHHHHHhC-----CcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHH
Confidence              999999999999999999     899999999874  68999987  4679999998764

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.7e-32  Score=236.42  Aligned_cols=221  Identities=17%  Similarity=0.189  Sum_probs=147.5

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---C--CCCeEEEccCceeEeCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---Q--LKNVVYAGSHGMDISTP   94 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~--~~~~~~i~~nGa~i~~~   94 (288)
                      .|||+||+||||++     .++.+++++.++|++|++++ .|++||||++..+.+.+   +  .|..++|++||+.++.+
T Consensus         4 iKli~~DlDGTL~~-----~~~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~   78 (271)
T d1rkqa_           4 IKLIAIDMDGTLLL-----PDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKA   78 (271)
T ss_dssp             CCEEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEET
T ss_pred             eeEEEEeCCccccC-----CCCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEecc
Confidence            79999999999998     46789999999999999995 89999999999888764   3  35578999999999865


Q ss_pred             C-CCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHH----------------------------HhhccC
Q 040896           95 A-GSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEE----------------------------KIKTIK  145 (288)
Q Consensus        95 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~  145 (288)
                      . +.......                  ...   .....+.+....                            +....+
T Consensus        79 ~~~~~i~~~~------------------~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (271)
T d1rkqa_          79 ADGSTVAQTA------------------LSY---DDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIP  137 (271)
T ss_dssp             TTCCEEEECC------------------BCH---HHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCC
T ss_pred             CCCeEEEeec------------------ccH---HHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCc
Confidence            3 33221000                  000   011111111111                            111111


Q ss_pred             CeEEEecC-----ceEEEeccCCCcccHHHHHHHHHHHHHhCCCeE-EeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCC
Q 040896          146 GATVEDNK-----FCISVHFRRVDEDDINTLQEMVNSIVEAYPNFR-ISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNN  219 (288)
Q Consensus       146 ~~~~e~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~  219 (288)
                      ........     ......+. .++.......+.+.+.+..  .+. +.+++.++||.|+ ++|||.||++|+++++++.
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~i~p~-~~~K~~al~~l~~~~~i~~  213 (271)
T d1rkqa_         138 LVFCEAEKMDPNTQFLKVMMI-DEPAILDQAIARIPQEVKE--KYTVLKSAPYFLEILDK-RVNKGTGVKSLADVLGIKP  213 (271)
T ss_dssp             EEECCGGGSCTTCCBCEEEEE-CCHHHHHHHHHHSCHHHHH--HEEEEEEETTEEEEEET-TCSHHHHHHHHHHHHTCCG
T ss_pred             cccchhhhcCcccceEEEEEe-cCHHHHHHHHHHHHHHhhc--ceEEEEecCceEEecCC-CCCcccccceehhhcccch
Confidence            11110000     00000000 0111112222222222221  233 4567889999999 9999999999999999997


Q ss_pred             CCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC--hhHHHHHHHHHH
Q 040896          220 ASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD--PDEVMSFLRRLA  279 (288)
Q Consensus       220 ~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~--~~~v~~~l~~~~  279 (288)
                      +   ++++||||.||++||+.+     |+||+|+||.++  ..|++++.+  .+||+++|++++
T Consensus       214 ~---~ii~~GD~~ND~~ml~~~-----~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~~  269 (271)
T d1rkqa_         214 E---EIMAIGDQENDIAMIEYA-----GVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV  269 (271)
T ss_dssp             G---GEEEEECSGGGHHHHHHS-----SEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred             h---cEEEEeCcHhHHHHHHhC-----CcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHHHHh
Confidence            7   999999999999999999     899999999864  689999874  678999998874

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.97  E-value=1.4e-31  Score=224.23  Aligned_cols=217  Identities=18%  Similarity=0.238  Sum_probs=152.2

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPA   95 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~   95 (288)
                      |.|+|+||+||||++     ++..++++++++|++|++.+ .|+++|||+...+...+   ++ ..+++++||+.+....
T Consensus         1 kiK~i~~D~DGTL~~-----~~~~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~-~~~~i~~~g~~~~~~~   74 (230)
T d1wr8a_           1 KIKAISIDIDGTITY-----PNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGT-SGPVVAEDGGAISYKK   74 (230)
T ss_dssp             CCCEEEEESTTTTBC-----TTSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTC-CSCEEEGGGTEEEETT
T ss_pred             CceEEEEecCCCCcC-----CCCccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCC-Ccccccccceeeeccc
Confidence            468999999999998     56789999999999999985 99999999999888865   33 3569999999988765


Q ss_pred             CCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeE-EEecCceEEEeccCCCcccHHHHHHH
Q 040896           96 GSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGAT-VEDNKFCISVHFRRVDEDDINTLQEM  174 (288)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~  174 (288)
                      .....                   .....++ .....+...+    ......+ ...+...+.+ ....  ...    +.
T Consensus        75 ~~~~~-------------------~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~--~~~----~~  123 (230)
T d1wr8a_          75 KRIFL-------------------ASMDEEW-ILWNEIRKRF----PNARTSYTMPDRRAGLVI-MRET--INV----ET  123 (230)
T ss_dssp             EEEES-------------------CCCSHHH-HHHHHHHHHC----TTCCBCTTGGGCSSCEEE-CTTT--SCH----HH
T ss_pred             ccccc-------------------ccccHHH-HHHHHHHHhc----ccccceeecccceeeEEE-eccc--ccH----HH
Confidence            43211                   0011110 0111111111    1111000 1112222222 1111  111    23


Q ss_pred             HHHHHHhCC-CeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEe
Q 040896          175 VNSIVEAYP-NFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVS  253 (288)
Q Consensus       175 l~~~~~~~~-~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~  253 (288)
                      +++++++.. .+....+..++|++|+ +++|+.|++.++++++++++   ++++|||+.||++||+.+     |+||+|+
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~iei~~~-~~~K~~al~~l~~~~~i~~~---~~~~iGD~~NDi~ml~~a-----g~~vav~  194 (230)
T d1wr8a_         124 VREIINELNLNLVAVDSGFAIHVKKP-WINKGSGIEKASEFLGIKPK---EVAHVGDGENDLDAFKVV-----GYKVAVA  194 (230)
T ss_dssp             HHHHHHHTTCSCEEEECSSCEEEECT-TCCHHHHHHHHHHHHTSCGG---GEEEEECSGGGHHHHHHS-----SEEEECT
T ss_pred             HHHHHHHhccceEEeeCCcEEEEeeC-CcCcchhhcccccccccchh---heeeeecCccHHHHHHHC-----CeEEEEC
Confidence            344444443 4556667789999999 99999999999999999987   999999999999999999     8999999


Q ss_pred             cCCCC--ccceEEeCC--hhHHHHHHHHHHHHh
Q 040896          254 SVPRE--TKALYSLRD--PDEVMSFLRRLARWK  282 (288)
Q Consensus       254 na~~~--~~A~~~~~~--~~~v~~~l~~~~~~~  282 (288)
                      ||.+.  ..|++++.+  .+||+++|++++..+
T Consensus       195 na~~~~k~~A~~v~~~~~~~gv~~~i~~~l~~~  227 (230)
T d1wr8a_         195 QAPKILKENADYVTKKEYGEGGAEAIYHILEKF  227 (230)
T ss_dssp             TSCHHHHTTCSEECSSCHHHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHhCCEEECCCCcCHHHHHHHHHHHHc
Confidence            99864  689999975  568999999988643

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=99.97  E-value=1.5e-31  Score=231.10  Aligned_cols=227  Identities=16%  Similarity=0.171  Sum_probs=152.8

Q ss_pred             hcCCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhcC--------CCCeEEEccC
Q 040896           17 AKGKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFVQ--------LKNVVYAGSH   87 (288)
Q Consensus        17 ~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~~--------~~~~~~i~~n   87 (288)
                      .+...|+||||+||||+.+    .++.++++++++|++|++++ .|+|||||++..+.++++        ....+.|+.|
T Consensus         6 ~~~~ikli~~DlDGTLl~~----~~~~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~   81 (283)
T d2b30a1           6 KGADIKLLLIDFDGTLFVD----KDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYIN   81 (283)
T ss_dssp             TTCCCCEEEEETBTTTBCC----TTTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGG
T ss_pred             cccCccEEEEECCCCCcCC----CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEEEe
Confidence            4566899999999999953    35689999999999999885 899999999999887653        2245689999


Q ss_pred             ceeEeCCCCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHh--------------------------
Q 040896           88 GMDISTPAGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKI--------------------------  141 (288)
Q Consensus        88 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------  141 (288)
                      |+.++...+.....                  .....   .....+.+.+....                          
T Consensus        82 g~~~~~~~~~~~~~------------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (283)
T d2b30a1          82 GTIVYDQIGYTLLD------------------ETIET---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQ  140 (283)
T ss_dssp             GTEEECTTCCEEEE------------------CCCCH---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHH
T ss_pred             eeEEEcCCCcEeee------------------cccCH---HHHHHHHHHHHhhcccceEEEEecceeEEeccchHHHHHH
Confidence            99999765543210                  00000   11122222221110                          


Q ss_pred             ---hccCCeEEEe------cCceEEEeccCCCcccHHHHHHHHHHHHHhCC-CeE-EeCCceEEEEeCCCCCCHHHHHHH
Q 040896          142 ---KTIKGATVED------NKFCISVHFRRVDEDDINTLQEMVNSIVEAYP-NFR-ISGGKKVMEIRPCIDWDKGRALEY  210 (288)
Q Consensus       142 ---~~~~~~~~e~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~-~~~~~~~ieI~~~~~~sKg~al~~  210 (288)
                         ........+.      ......+.+.  +......+.+.+.   +.+. ... +.++..++||.|+ ++||+.|++.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~-~~~K~~~l~~  214 (283)
T d2b30a1         141 KMYSENRSIIIRHNEMLKYRTMNKLMIVL--DPSESKTVIGNLK---QKFKNKLTIFTTYNGHAEVTKL-GHDKYTGINY  214 (283)
T ss_dssp             HHHSCCCCEEECHHHHTTCCCCSEEEECC--CTTTHHHHHHHHH---HHSTTTEEEEECTTSCEEEEET-TCCHHHHHHH
T ss_pred             HHhhccccccccHHHHhhcccceEEEEec--CHHHHHHHHHHHH---HHhcccceEEEecceeEeecCC-cchhHHHHHH
Confidence               0000000000      0000001011  1111222333333   3332 233 4667889999999 9999999999


Q ss_pred             HHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC--ccceEEeCC---hhHHHHHHHHHHHHh
Q 040896          211 LLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE--TKALYSLRD---PDEVMSFLRRLARWK  282 (288)
Q Consensus       211 l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~--~~A~~~~~~---~~~v~~~l~~~~~~~  282 (288)
                      ++++++++.+   ++++||||.||++||+.+     |+||+|+||.++  ..|++++..   .++|+++|+++++.|
T Consensus       215 l~~~~~i~~~---~vi~~GD~~ND~~Ml~~a-----~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~~~  283 (283)
T d2b30a1         215 LLKHYNISND---QVLVVGDAENDIAMLSNF-----KYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDLK  283 (283)
T ss_dssp             HHHHTTCCGG---GEEEEECSGGGHHHHHSC-----SEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTTC
T ss_pred             Hhhhcccccc---eEEEecCChhhHHHHHhC-----CcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHcCC
Confidence            9999999987   999999999999999999     899999999874  689999853   346999999998765

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.96  E-value=1.6e-30  Score=218.54  Aligned_cols=209  Identities=14%  Similarity=0.155  Sum_probs=148.5

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh---cCCCCeEEEccCceeEeCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF---VQLKNVVYAGSHGMDISTPAG   96 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~---~~~~~~~~i~~nGa~i~~~~~   96 (288)
                      .|+|+||+||||++     +.+.+++++.++|++|++.+ .|+++|||++..+..+   +++. .+++++||+.++.+++
T Consensus         3 iKli~~D~DGTL~~-----~~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~-~~~i~~~G~~~~~~~~   76 (225)
T d1l6ra_           3 IRLAAIDVDGNLTD-----RDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN-GPVFGENGGIMFDNDG   76 (225)
T ss_dssp             CCEEEEEHHHHSBC-----TTSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC-SCEEEGGGTEEECTTS
T ss_pred             eEEEEEecCCCCcC-----CCCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCC-ceEEeecceEEEeCCc
Confidence            48999999999998     56789999999999999985 8999999999876665   4543 5699999999988765


Q ss_pred             CcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEE---ecCceEEEeccCCCcccHHHHHH
Q 040896           97 SLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVE---DNKFCISVHFRRVDEDDINTLQE  173 (288)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~  173 (288)
                      .....                    ...   .......+.+.   ....-....   .......+.   .+..    ..+
T Consensus        77 ~~~~~--------------------~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~  123 (225)
T d1l6ra_          77 SIKKF--------------------FSN---EGTNKFLEEMS---KRTSMRSILTNRWREASTGFD---IDPE----DVD  123 (225)
T ss_dssp             CEEES--------------------SCS---HHHHHHHHHHT---TTSSCBCCGGGGGCSSSEEEB---CCGG----GHH
T ss_pred             cEEEe--------------------cCh---HHHHHHHHHHH---HhcCcceeecccceeeeeccc---cCHH----HHH
Confidence            43210                    111   11222222221   111100000   011111111   1111    223


Q ss_pred             HHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEe
Q 040896          174 MVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVS  253 (288)
Q Consensus       174 ~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~  253 (288)
                      .+...+... ++.+..++..+|+.|+ +.|||.|+++|+++++++.+   ++++||||.||++||+.+     |++|+|+
T Consensus       124 ~~~~~~~~~-~~~i~~~~~~~~i~~~-~~~K~~ai~~l~~~~~i~~~---~v~~~GDs~nD~~m~~~a-----~~~vav~  193 (225)
T d1l6ra_         124 YVRKEAESR-GFVIFYSGYSWHLMNR-GEDKAFAVNKLKEMYSLEYD---EILVIGDSNNDMPMFQLP-----VRKACPA  193 (225)
T ss_dssp             HHHHHHHTT-TEEEEEETTEEEEEET-TCSHHHHHHHHHHHTTCCGG---GEEEECCSGGGHHHHTSS-----SEEEECT
T ss_pred             HHHHHHhhc-CcEEEECCcEEEecCC-ccchHHHHHHHhhhhccchh---heeeecCCcchHHHHHHC-----CeEEEEC
Confidence            333333333 5777777789999999 99999999999999999987   999999999999999999     8999999


Q ss_pred             cCCCC--ccceEEeCC--hhHHHHHHHHH
Q 040896          254 SVPRE--TKALYSLRD--PDEVMSFLRRL  278 (288)
Q Consensus       254 na~~~--~~A~~~~~~--~~~v~~~l~~~  278 (288)
                      ||.+.  .+|+|++..  .+||++.|+++
T Consensus       194 na~~~~k~~ad~v~~~~~~~gi~~~l~~~  222 (225)
T d1l6ra_         194 NATDNIKAVSDFVSDYSYGEEIGQIFKHF  222 (225)
T ss_dssp             TSCHHHHHHCSEECSCCTTHHHHHHHHHT
T ss_pred             CCcHHHHHhCCEEECCCCcCHHHHHHHHh
Confidence            99764  689999864  67999999875

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=99.96  E-value=6.5e-29  Score=210.90  Aligned_cols=217  Identities=16%  Similarity=0.197  Sum_probs=143.5

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCC-CeEEEccCceeEeCC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLK-NVVYAGSHGMDISTP   94 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~-~~~~i~~nGa~i~~~   94 (288)
                      ++.|||||+||||+++     +.  .++..+++.++++.+ .|+++|||++..+.+++   ++. +..+|++||+.++.+
T Consensus         2 ~~~li~~DlDGTL~~~-----~~--~~~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~   74 (244)
T d1s2oa1           2 RQLLLISDLDNTWVGD-----QQ--ALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHP   74 (244)
T ss_dssp             CSEEEEECTBTTTBSC-----HH--HHHHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEET
T ss_pred             CceEEEEECcccCCCC-----CC--CHHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEc
Confidence            4689999999999983     22  234566777777664 89999999999988875   442 356899999999986


Q ss_pred             CCCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEE----ecCceEEEeccCCCcccHHH
Q 040896           95 AGSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVE----DNKFCISVHFRRVDEDDINT  170 (288)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e----~~~~~~~~~~~~~~~~~~~~  170 (288)
                      .+... .|..                .....+   .......   .....+.....    ...+.+.+.+.....   ..
T Consensus        75 ~~~~~-~~~~----------------~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  128 (244)
T d1s2oa1          75 EGLDQ-HWAD----------------YLSEHW---QRDILQA---IADGFEALKPQSPLEQNPWKISYHLDPQAC---PT  128 (244)
T ss_dssp             TEECH-HHHH----------------HHHTTC---CHHHHHH---HHHTCTTEEECCGGGCBTTBEEEEECTTSC---TH
T ss_pred             cCcch-HHHH----------------HHHHHH---hHHHHHH---HHhhcccccccChhhhcceEEEEecccccc---HH
Confidence            54321 1100                000000   0111111   11223332222    223344554432222   23


Q ss_pred             HHHHHHHHHHhC-CCeE-EeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce
Q 040896          171 LQEMVNSIVEAY-PNFR-ISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY  248 (288)
Q Consensus       171 ~~~~l~~~~~~~-~~~~-~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~  248 (288)
                      ..+.+.+.++.. ..+. ...++.++||+|+ +++||.|+++|++++|++.+   ++++||||.||++||+.+     |+
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~K~~a~~~l~~~~gi~~~---~~v~~GD~~ND~~Ml~~~-----~~  199 (244)
T d1s2oa1         129 VIDQLTEMLKETGIPVQVIFSSGKDVDLLPQ-RSNKGNATQYLQQHLAMEPS---QTLVCGDSGNDIGLFETS-----AR  199 (244)
T ss_dssp             HHHHHHHHHHTSSCCEEEEEETTTEEEEEET-TCSHHHHHHHHHHHTTCCGG---GEEEEECSGGGHHHHTSS-----SE
T ss_pred             HHHHHHHHHHhhcccceeeecCCcEEEEEeC-ccchhHHHHHHHHhccCChh---hEEEEcCCCCCHHHHhhC-----Cc
Confidence            445555555543 2333 3456689999999 99999999999999999977   999999999999999999     89


Q ss_pred             EEEEecCCCC--ccce-------EEeCC--hhHHHHHHHHH
Q 040896          249 PIIVSSVPRE--TKAL-------YSLRD--PDEVMSFLRRL  278 (288)
Q Consensus       249 ~v~v~na~~~--~~A~-------~~~~~--~~~v~~~l~~~  278 (288)
                      ||+|+||.++  ..|+       |++..  .+|+++.|+++
T Consensus       200 ~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~f  240 (244)
T d1s2oa1         200 GVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAHF  240 (244)
T ss_dssp             EEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHHT
T ss_pred             EEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHHh
Confidence            9999999864  3444       56543  66899988775

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=4.6e-28  Score=202.70  Aligned_cols=201  Identities=15%  Similarity=0.234  Sum_probs=126.7

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPA   95 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~   95 (288)
                      ++.||||||||||++     ++++++++++++|++|++++ .|++||||++..+.+.+   ++.+.++|++||+.|+...
T Consensus         3 ~~~li~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~   77 (232)
T d1xvia_           3 QPLLVFSDLDGTLLD-----SHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAE   77 (232)
T ss_dssp             CCEEEEEECTTTTSC-----SSCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCT
T ss_pred             CCEEEEEECCCCccC-----CcCcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCCceEEccCCeEEEecC
Confidence            356999999999998     46689999999999999995 99999999999988875   5556789999999999764


Q ss_pred             CCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEE----------------------ecC
Q 040896           96 GSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVE----------------------DNK  153 (288)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e----------------------~~~  153 (288)
                      .........            .. . .... ............... ........                      ...
T Consensus        78 ~~~~~~~~~------------~~-~-~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (232)
T d1xvia_          78 QWQEIDGFP------------RI-I-SGIS-HGEISLVLNTLREKE-HFKFTTFDDVDDATIAEWTGLSRSQAALTQLHE  141 (232)
T ss_dssp             TCTTSTTTT------------EE-E-CSSC-HHHHHHHHHHHHHHH-CCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCS
T ss_pred             Cccccchhh------------hh-h-hHHH-HHHHHHhhhhhhhhh-ccccccccchhhhhhhhhhcccchhhhhhhhcc
Confidence            432110000            00 0 0000 001110000000000 00000000                      000


Q ss_pred             ceEEEeccCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHh---cCCCCCCCceeEEEcC
Q 040896          154 FCISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDT---FGFNNASDFLPLYIGD  230 (288)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~---~~~~~~~~~~vv~~GD  230 (288)
                      +........ .    .............. ...+..+..+++++|+ +++|++|+++|++.   +|++.+   ++++|||
T Consensus       142 ~~~~~~~~~-~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~K~~~~~~l~~~~~~l~i~~~---~~iafGD  211 (232)
T d1xvia_         142 ASVTLIWRD-S----DERMAQFTARLNEL-GLQFMQGARFWHVLDA-SAGKDQAANWIIATYQQLSGKRP---TTLGLGD  211 (232)
T ss_dssp             SCEEEEECS-C----HHHHHHHHHHHHHT-TEEEEECSSCEEEEET-TCCHHHHHHHHHHHHHHHHSSCC---EEEEEES
T ss_pred             eeeeecccc-c----HHHHHHHHHHhhhc-cceeeeccceeeccCC-CchHHHHHHHHHHHHHHcCCChh---cEEEEcC
Confidence            000000000 0    11222233333332 3555566678999999 99999999999986   478877   9999999


Q ss_pred             CcccHHHHHHHHhcCCceEEEEecCC
Q 040896          231 DKTDEDAFKVIRHMGRGYPIIVSSVP  256 (288)
Q Consensus       231 s~ND~~Ml~~~~~~~~g~~v~v~na~  256 (288)
                      |.||++||+.+     |+||+|.||.
T Consensus       212 ~~NDl~Ml~~a-----~~~vaV~n~~  232 (232)
T d1xvia_         212 GPNDAPLLEVM-----DYAVIVKGLN  232 (232)
T ss_dssp             SGGGHHHHHTS-----SEEEECCCCC
T ss_pred             CHhHHHHHHhC-----CeEEEEeCCC
Confidence            99999999999     8999999984

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.95  E-value=2.9e-27  Score=199.45  Aligned_cols=215  Identities=19%  Similarity=0.250  Sum_probs=128.2

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc---CCCCeEEEccCceeEeCCCC
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV---QLKNVVYAGSHGMDISTPAG   96 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~~i~~nGa~i~~~~~   96 (288)
                      .|+|||||||||+++     .  .+++++++|++|++++ .|++||||++..+..++   ++ ..++|++||+.++.+++
T Consensus         2 iKli~~DlDGTLl~~-----~--~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~   73 (243)
T d1wzca1           2 IRLIFLDIDKTLIPG-----Y--EPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEV-ETPFISENGSAIFIPKG   73 (243)
T ss_dssp             EEEEEECCBTTTBSS-----S--CSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTC-CSCEEETTTTEEEECTT
T ss_pred             cEEEEEeCCCCCCCC-----C--CCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcc-cccccccCCcEEEcCCC
Confidence            489999999999973     2  3578999999999996 99999999999998875   33 35799999999998766


Q ss_pred             CcccC--CCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCe----------------EE---EecCce
Q 040896           97 SLKQN--NPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGA----------------TV---EDNKFC  155 (288)
Q Consensus        97 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~---e~~~~~  155 (288)
                      .....  |...        ...+... .... ...+.................                .+   ......
T Consensus        74 ~~~~~~~~~~~--------~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (243)
T d1wzca1          74 YFPFDVKGKEV--------GNYIVIE-LGIR-VEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYS  143 (243)
T ss_dssp             CCC------------------CEEEE-CSCC-HHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSE
T ss_pred             ceecccchhHH--------HHHHHHH-Hhhh-HHHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHHHHHHhhhcc
Confidence            53211  1000        0000000 0000 011111111111110000000                00   000111


Q ss_pred             EEEeccCCCcccHHHHHHHHHHHHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcC-CCCCCCceeEEEcCCccc
Q 040896          156 ISVHFRRVDEDDINTLQEMVNSIVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFG-FNNASDFLPLYIGDDKTD  234 (288)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~-~~~~~~~~vv~~GDs~ND  234 (288)
                      ....... . .       .+.+..... ++.+..+ ..+++.|+ +++|+.|+++++++++ ++.+   ++++||||.||
T Consensus       144 ~~~~~~~-~-~-------~~~~~~~~~-~~~~~~~-~~~~~~~~-~~~K~~al~~l~~~~~~~~~~---~~~a~GD~~ND  208 (243)
T d1wzca1         144 ETIFEWS-R-D-------GWEEVLVEG-GFKVTMG-SRFYTVHG-NSDKGKAAKILLDFYKRLGQI---ESYAVGDSYND  208 (243)
T ss_dssp             EEECBCS-S-S-------CHHHHHHHT-TCEEEEC-SSSEEEEC-SCCHHHHHHHHHHHHHTTSCE---EEEEEECSGGG
T ss_pred             hhhhhhh-h-H-------HHHHhhhhc-CeEEeec-ccccchhh-hhccHHHHHHHHHHhcCCCcc---cEEEEcCCHhH
Confidence            1111110 0 0       111222232 3555444 34778899 9999999999999984 7766   99999999999


Q ss_pred             HHHHHHHHhcCCceEEEEecCCCCccceEEeCChhHHHHHH
Q 040896          235 EDAFKVIRHMGRGYPIIVSSVPRETKALYSLRDPDEVMSFL  275 (288)
Q Consensus       235 ~~Ml~~~~~~~~g~~v~v~na~~~~~A~~~~~~~~~v~~~l  275 (288)
                      ++||+++     |+||+|+||..+.+.  .+.+..++.+.+
T Consensus       209 ~~Ml~~a-----~~~va~~Na~~~~~~--~~~~i~~~~~~i  242 (243)
T d1wzca1         209 FPMFEVV-----DKVFIVGSLKHKKAQ--NVSSIIDVLEVI  242 (243)
T ss_dssp             HHHHTTS-----SEEEEESSCCCTTCE--EESCHHHHHHHH
T ss_pred             HHHHHcC-----CcEEEeCCCChHHHh--hhhHHHHHHHhh
Confidence            9999999     899999999765322  245555555544

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.1e-25  Score=186.86  Aligned_cols=201  Identities=15%  Similarity=0.170  Sum_probs=116.9

Q ss_pred             EEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhc-C-C----CCeEEEccCceeEeCCC
Q 040896           22 IVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV-Q-L----KNVVYAGSHGMDISTPA   95 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~-~-~----~~~~~i~~nGa~i~~~~   95 (288)
                      .|++|||||||++     ++++++++++++|++|++++.++++|||+.......+ . +    ...++++.||+.++..+
T Consensus         2 ~i~lFDlDGTLl~-----~~~~is~~~~~~i~~l~~~g~~~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   76 (244)
T d2fuea1           2 VLCLFDVDGTLTP-----ARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHG   76 (244)
T ss_dssp             EEEEEESBTTTBS-----TTSCCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEETT
T ss_pred             EEEEEccccCccC-----CCCcCCHHHHHHHHHHHhCCCEEEEecCChhhhhhhhhhhhccccccceeecccceeeccCC
Confidence            3444699999998     5678999999999999988877788888877766543 2 1    24678999999988754


Q ss_pred             CCcccCCCCCcccccccCCCceeccCCCccchhHHHHHHHH-HHHHhhccCC----eEEEecCceEEEeccCCCccc--H
Q 040896           96 GSLKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQV-LEEKIKTIKG----ATVEDNKFCISVHFRRVDEDD--I  168 (288)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~e~~~~~~~~~~~~~~~~~--~  168 (288)
                      ....   ...            +.....   .......... ..........    ...........+.........  .
T Consensus        77 ~~~~---~~~------------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (244)
T d2fuea1          77 RLLS---KQT------------IQNHLG---EELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEER  138 (244)
T ss_dssp             EECC---CCC------------HHHHHC---HHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHH
T ss_pred             ccce---eec------------hhHHHh---hhHHHHHHhhhhhhhheecccccccchhhhhhhhhhccccccccchhhh
Confidence            4321   100            000000   0011111111 1111111111    111111111122111111110  0


Q ss_pred             H----------HHHHHHHHHHHhCC--CeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCc---
Q 040896          169 N----------TLQEMVNSIVEAYP--NFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDK---  232 (288)
Q Consensus       169 ~----------~~~~~l~~~~~~~~--~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~---  232 (288)
                      .          ...+......+...  ...+ .++..++||+|+ ++|||+||++|++.   +.+   +|++|||+.   
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lei~~~-~vsKg~al~~L~~~---~~~---ev~afGD~~~~G  211 (244)
T d2fuea1         139 IEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPE-GWDKRYCLDSLDQD---SFD---TIHFFGNETSPG  211 (244)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEET-TCSTTHHHHHHTTS---CCS---EEEEEESCCSTT
T ss_pred             hhhhhhccchhhHHHHHHHHHHHhhccceeEeeccCccceecch-hccHHHHHHHHhcC---Chh---hEEEEcCCCCCC
Confidence            0          01112222223332  2333 567899999999 99999999999863   555   999999975   


Q ss_pred             -ccHHHHHHHHhcCCc-eEEEEecCCC
Q 040896          233 -TDEDAFKVIRHMGRG-YPIIVSSVPR  257 (288)
Q Consensus       233 -ND~~Ml~~~~~~~~g-~~v~v~na~~  257 (288)
                       ||++||+.+     | .|++|+||.+
T Consensus       212 ~ND~eml~~a-----~~~~~av~na~~  233 (244)
T d2fuea1         212 GNDFEIFADP-----RTVGHSVVSPQD  233 (244)
T ss_dssp             STTHHHHHST-----TSEEEECSSHHH
T ss_pred             CCcHHHHHcC-----CCcEEEcCCHHH
Confidence             999999999     6 7999998854

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5e-25  Score=184.87  Aligned_cols=210  Identities=18%  Similarity=0.205  Sum_probs=120.8

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhcC-C---CCeEEEccCceeEeCCC
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFVQ-L---KNVVYAGSHGMDISTPA   95 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~~-~---~~~~~i~~nGa~i~~~~   95 (288)
                      +.||++|||||||++     ++++++++++++|++|++++.++++|||++..+...+. .   ....+++.||+.++..+
T Consensus         2 ~~kl~~fDlDGTLl~-----~~~~i~~~~~~al~~l~~~g~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T d2amya1           2 GPALCLFDVDGTLTA-----PRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDG   76 (243)
T ss_dssp             CSEEEEEESBTTTBC-----TTSCCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETT
T ss_pred             CCEEEEEcCcCCeeC-----CCCcCCHHHHHHHHHHHcCCCEEEEcCCChHHhHHHHhhhccccceEEecCcEEEEecCC
Confidence            468999999999998     56789999999999999888899999999998887653 1   23445566666665543


Q ss_pred             CCcccCCCCCcccccccCCCceeccCCCccc-hhHHHHHHHH-HHHHhhccCC----eEEEecCceEEEeccCCCccc-H
Q 040896           96 GSLKQNNPKHETRTVDEQGNEVVHFQPAQEF-LPQIQEMIQV-LEEKIKTIKG----ATVEDNKFCISVHFRRVDEDD-I  168 (288)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~----~~~e~~~~~~~~~~~~~~~~~-~  168 (288)
                      .....                   .....+. .......... ..........    ...+.......+......... .
T Consensus        77 ~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (243)
T d2amya1          77 KLLCR-------------------QNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEE  137 (243)
T ss_dssp             EEEEE-------------------CCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHH
T ss_pred             cccee-------------------cchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhh
Confidence            32210                   0000000 0111111111 1111111010    011111111122111111110 0


Q ss_pred             -----------HHHHHHHHHHHHhCC--CeEE-eCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcC----
Q 040896          169 -----------NTLQEMVNSIVEAYP--NFRI-SGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGD----  230 (288)
Q Consensus       169 -----------~~~~~~l~~~~~~~~--~~~~-~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GD----  230 (288)
                                 ....+..+++.+.++  .+.+ .++..++||+|+ ++|||+||++|+   +++.+   ++++|||    
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lei~~~-~vsKg~al~~l~---~~~~~---ev~afGD~~~~  210 (243)
T d2amya1         138 RIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPD-GWDKRYCLRHVE---NDGYK---TIYFFGDKTMP  210 (243)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHHHTTTSCEEEEEETTTEEEEEET-TCSGGGGGGGTT---TSCCS---EEEEEECSCC-
T ss_pred             hhhhhhhhcchhhhHHHHHHHHHHhcccceEEEecCCccceeecc-ccCHHHHHHHHh---CCCcc---eEEEEcCCCCC
Confidence                       011122333334332  3444 567899999999 999999999985   45656   9999999    


Q ss_pred             CcccHHHHHHHHhcCCc-eEEEEecCCCCccceEEeCChhHHHHHHHHH
Q 040896          231 DKTDEDAFKVIRHMGRG-YPIIVSSVPRETKALYSLRDPDEVMSFLRRL  278 (288)
Q Consensus       231 s~ND~~Ml~~~~~~~~g-~~v~v~na~~~~~A~~~~~~~~~v~~~l~~~  278 (288)
                      |.||++||+++     | .+++|+             +++++.+.++.+
T Consensus       211 g~NDi~Ml~~~-----g~~~~~v~-------------~~~~~~~~~~~l  241 (243)
T d2amya1         211 GGNDHEIFTDP-----RTMGYSVT-------------APEDTRRICELL  241 (243)
T ss_dssp             --CCCHHHHCT-----TEEEEECS-------------SHHHHHHHHHHH
T ss_pred             CCCcHHHHHcc-----CCcEEEeC-------------CHHHHHHHHHHH
Confidence            67999999998     5 566544             456666666554

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.62  E-value=5e-18  Score=138.24  Aligned_cols=69  Identities=9%  Similarity=0.047  Sum_probs=57.2

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC---CccceEEe-CChhHHHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR---ETKALYSL-RDPDEVMSFLR  276 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~---~~~A~~~~-~~~~~v~~~l~  276 (288)
                      ...|+...+..+++++++.+   ++++||||.||++||+++     |+|||| |+.+   +.+|+|++ ++.+++.+.|.
T Consensus       127 ~~~~~~~~~~~~~~~~i~~~---eviaiGDg~NDi~Ml~~A-----g~gIAm-na~~~v~~~~~~~~~~~~~~d~~~~~~  197 (206)
T d1rkua_         127 QLRQKDPKRQSVIAFKSLYY---RVIAAGDSYNDTTMLSEA-----HAGILF-HAPENVIREFPQFPAVHTYEDLKREFL  197 (206)
T ss_dssp             ECCSSSHHHHHHHHHHHTTC---EEEEEECSSTTHHHHHHS-----SEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred             cccchhhHHHHHHHhccccc---ceEEecCCccCHHHHHhC-----CccEEE-CCCHHHHHhCCCceeecCHHHHHHHHH
Confidence            45677888899999999888   999999999999999999     999999 7654   25778876 57888887665


Q ss_pred             HH
Q 040896          277 RL  278 (288)
Q Consensus       277 ~~  278 (288)
                      +.
T Consensus       198 ~~  199 (206)
T d1rkua_         198 KA  199 (206)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=99.28  E-value=2e-12  Score=103.22  Aligned_cols=78  Identities=21%  Similarity=0.199  Sum_probs=67.9

Q ss_pred             eCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCC--hh-HH
Q 040896          197 RPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRD--PD-EV  271 (288)
Q Consensus       197 ~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~--~~-~v  271 (288)
                      ... ..+|..++++++++++++++   ++++|||+.||++||+.+     |+|++|+||.+  +.+|+||+..  .+ .|
T Consensus        75 ~~~-~~~K~~~l~~~~~~~~i~~~---~v~~vGDd~nDl~~l~~~-----g~siap~nA~~~vk~~A~~Vt~~~GG~Gav  145 (177)
T d1k1ea_          75 FLG-KLEKETACFDLMKQAGVTAE---QTAYIGDDSVDLPAFAAC-----GTSFAVADAPIYVKNAVDHVLSTHGGKGAF  145 (177)
T ss_dssp             EES-CSCHHHHHHHHHHHHTCCGG---GEEEEECSGGGHHHHHHS-----SEEEECTTSCHHHHTTSSEECSSCTTTTHH
T ss_pred             ccc-cccHHHHHHHHHHHhcCCcc---eeEEecCCccHHHHHhhC-----CeEEEcCCccHHHHHhCCEEeCCCCCCchH
Confidence            344 67999999999999999988   999999999999999999     99999999987  4789999963  33 49


Q ss_pred             HHHHHHHHHHhh
Q 040896          272 MSFLRRLARWKK  283 (288)
Q Consensus       272 ~~~l~~~~~~~~  283 (288)
                      .++++.++..+.
T Consensus       146 rE~~e~il~~~~  157 (177)
T d1k1ea_         146 REMSDMILQAQG  157 (177)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCC
Confidence            999998887654

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.05  E-value=2.2e-11  Score=98.16  Aligned_cols=74  Identities=23%  Similarity=0.270  Sum_probs=63.3

Q ss_pred             eEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--CccceEEeCC--
Q 040896          192 KVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--ETKALYSLRD--  267 (288)
Q Consensus       192 ~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~~~A~~~~~~--  267 (288)
                      ...+.... +..|..++..+++.++++++   ++++||||.||++|++++     |++|+| |+.+  +.+|++++++  
T Consensus       132 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~i~iGDs~nDi~m~~~a-----g~~va~-na~~~lk~~Ad~vi~~~d  201 (210)
T d1j97a_         132 DVEGEVLK-ENAKGEILEKIAKIEGINLE---DTVAVGDGANDISMFKKA-----GLKIAF-CAKPILKEKADICIEKRD  201 (210)
T ss_dssp             EEECSSCS-TTHHHHHHHHHHHHHTCCGG---GEEEEESSGGGHHHHHHC-----SEEEEE-SCCHHHHTTCSEEECSSC
T ss_pred             cccccccc-cccccchhhhHHHHhccccc---ceEEecCCcChHHHHHHC-----CCCEEE-CCCHHHHHhCCEEEcCCC
Confidence            44555566 78899999999999999987   999999999999999999     899999 8866  3689999974  


Q ss_pred             hhHHHHHH
Q 040896          268 PDEVMSFL  275 (288)
Q Consensus       268 ~~~v~~~l  275 (288)
                      .+||+++|
T Consensus       202 ~~~vl~~l  209 (210)
T d1j97a_         202 LREILKYI  209 (210)
T ss_dssp             GGGGGGGC
T ss_pred             HHHHHHHh
Confidence            56888765

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=98.93  E-value=1e-08  Score=85.86  Aligned_cols=66  Identities=21%  Similarity=0.277  Sum_probs=52.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCC-cccHHHHHHHHhcCCce-EEEEecCCC--------CccceEEeCChhHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDD-KTDEDAFKVIRHMGRGY-PIIVSSVPR--------ETKALYSLRDPDEVM  272 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs-~ND~~Ml~~~~~~~~g~-~v~v~na~~--------~~~A~~~~~~~~~v~  272 (288)
                      -+......+++++|++++   ++++|||+ .+|+.|-+.+     |+ ++.|..+.-        ...++|++++..++.
T Consensus       186 P~p~~~~~a~~~l~~~~~---~~lmVGD~~~~DI~ga~~a-----G~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~  257 (261)
T d1vjra_         186 PNPLVVDVISEKFGVPKE---RMAMVGDRLYTDVKLGKNA-----GIVSILVLTGETTPEDLERAETKPDFVFKNLGELA  257 (261)
T ss_dssp             TSTHHHHHHHHHHTCCGG---GEEEEESCHHHHHHHHHHH-----TCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHH
T ss_pred             CcHHHHHHHHhhhccCch---hcceecCChhHHHHHHHHC-----CCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHH
Confidence            445677888999999988   99999999 5799999999     64 788865521        124699999999998


Q ss_pred             HHHH
Q 040896          273 SFLR  276 (288)
Q Consensus       273 ~~l~  276 (288)
                      ++|+
T Consensus       258 ~~l~  261 (261)
T d1vjra_         258 KAVQ  261 (261)
T ss_dssp             HHHC
T ss_pred             HHhC
Confidence            8774

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.90  E-value=1.9e-08  Score=83.86  Aligned_cols=60  Identities=25%  Similarity=0.368  Sum_probs=46.2

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCce-EEEEecC--CC----C--ccceEEeCChhH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGY-PIIVSSV--PR----E--TKALYSLRDPDE  270 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~-~v~v~na--~~----~--~~A~~~~~~~~~  270 (288)
                      -+....+++++++|++++   +++++||+. +|+.|.+.+     |+ ++.|.++  ..    +  ..++|++++.++
T Consensus       181 P~~~~~~~~~~~~gi~~~---~~l~IGD~~~~DI~~a~~a-----G~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e  250 (253)
T d1yv9a1         181 PKAIIMERAIAHLGVEKE---QVIMVGDNYETDIQSGIQN-----GIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDE  250 (253)
T ss_dssp             TSHHHHHHHHHHHCSCGG---GEEEEESCTTTHHHHHHHH-----TCEEEEETTSSSCSSSTTTCSSCCSEEESSGGG
T ss_pred             cchhHHHHHHHHhCCCcc---ceEEecCChHHHHHHHHHC-----CCCEEEECCCCCCHHHHHhcCCCCCEEECCHHH
Confidence            345557899999999988   999999995 699999999     76 7888554  21    1  246899988654

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=98.77  E-value=2.1e-08  Score=83.52  Aligned_cols=59  Identities=19%  Similarity=0.139  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCce-EEEEecC--CCC------ccceEEeCChhH
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGY-PIIVSSV--PRE------TKALYSLRDPDE  270 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~-~v~v~na--~~~------~~A~~~~~~~~~  270 (288)
                      +....+.+++++|++++   ++++|||+. +|+.|.+.+     |+ +|.|..+  ..+      ..++|++++..+
T Consensus       178 ~p~~~~~a~~~lgi~p~---e~v~IGD~~~~DI~~a~~a-----G~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~e  246 (250)
T d2c4na1         178 SPWIIRAALNKMQAHSE---ETVIVGDNLRTDILAGFQA-----GLETILVLSGVSSLDDIDSMPFRPSWIYPSVAE  246 (250)
T ss_dssp             STHHHHHHHHHHTCCGG---GEEEEESCTTTHHHHHHHT-----TCEEEEESSSSCCGGGGSSCSSCCSEEESSGGG
T ss_pred             hhhhHhhhhhhhcCCch---heEEecCChHHHHHHHHHC-----CCCEEEECCCCCCHHHHHhCCCCCCEEECCHHH
Confidence            36688999999999988   999999995 699999999     65 7777544  221      246899888655

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=98.33  E-value=2.1e-06  Score=71.13  Aligned_cols=58  Identities=21%  Similarity=0.244  Sum_probs=43.9

Q ss_pred             HHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCce-EEEEecC--CCC------ccceEEeCChhH
Q 040896          205 GRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGY-PIIVSSV--PRE------TKALYSLRDPDE  270 (288)
Q Consensus       205 g~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~-~v~v~na--~~~------~~A~~~~~~~~~  270 (288)
                      ....+.+++++|++++   +++++||+. +|+.+-+.+     |. +|.|..+  .++      ...+|++++..+
T Consensus       183 p~~~~~al~~l~i~~~---~~~mIGDs~~~DI~gA~~a-----G~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e  250 (253)
T d1wvia_         183 AVIMNKALDRLGVKRH---EAIMVGDNYLTDITAGIKN-----DIATLLVTTGFTKPEEVPALPIQPDFVLSSLAE  250 (253)
T ss_dssp             HHHHHHHHHHHTSCGG---GEEEEESCTTTTHHHHHHT-----TCEEEEESSSSSCTTTGGGCSSCCSEEESCGGG
T ss_pred             cccceehhhhcccccc---ceEEEcCChHHHHHHHHHC-----CCCEEEECCCCCCHHHHhhcCCCCCEEECCHHH
Confidence            6778888999999887   999999995 599988888     65 7888554  221      134788887543

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.25  E-value=7.6e-07  Score=67.49  Aligned_cols=51  Identities=27%  Similarity=0.298  Sum_probs=40.4

Q ss_pred             cCCcEEEEEecCCccccCcCCC-------CCCCCCHHHHHHHHHHhhcC-CEEEEcCCC
Q 040896           18 KGKKIVVFLDYDGTLSPIVEDP-------DKAFMSDTMRMAVHEVAHFF-PTAIVSGRC   68 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~~~~~~-------~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~   68 (288)
                      .++.|.|+||+||||+......       ....+-+.+.++|+.|++.+ .|+++|||+
T Consensus         4 ~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~   62 (149)
T d1ltqa1           4 PGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRE   62 (149)
T ss_dssp             TTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred             CCCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHHHhccCeEEEEecCc
Confidence            3678999999999998642211       12356788999999999986 899999996

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.20  E-value=4.2e-06  Score=62.68  Aligned_cols=51  Identities=18%  Similarity=0.253  Sum_probs=42.3

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF   75 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~   75 (288)
                      ...+++|.+||++.-.    ...+.+...++|+.|++.+ .++++||........+
T Consensus         3 ~~~~~~d~~~~~~~g~----~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~i   54 (135)
T d2b8ea1           3 VTAVIFDKTGTLTKGK----PDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAI   54 (135)
T ss_dssp             CCEEEEECCCCCBCSC----CCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHH
T ss_pred             EEEEEECCceEEEEec----CCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHH
Confidence            3679999999998632    2357889999999999985 8999999999877765

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=97.98  E-value=1e-06  Score=71.35  Aligned_cols=74  Identities=16%  Similarity=0.118  Sum_probs=58.7

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCCC----ccceEEeCChhHHHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPRE----TKALYSLRDPDEVMSFLR  276 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~~----~~A~~~~~~~~~v~~~l~  276 (288)
                      +..|+.+++.+++.++++++   +++++|||.||++|++.+     ++++++++....    ..+.....+.+++.+.|+
T Consensus       143 ~~~k~~~~~~~~~~~~~~~~---~~i~iGDs~~Dl~~a~~A-----~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~  214 (226)
T d2feaa1         143 SNQCGCCKPSVIHELSEPNQ---YIIMIGDSVTDVEAAKLS-----DLCFARDYLLNECREQNLNHLPYQDFYEIRKEIE  214 (226)
T ss_dssp             CSCCSSCHHHHHHHHCCTTC---EEEEEECCGGGHHHHHTC-----SEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHhcCCCc---eEEEEeCchhhHHHHHHC-----CEEEEecchHHHHHHcCCCeeecCCHHHHHHHHH
Confidence            45688889999999999887   999999999999999998     799998875321    223333468889999998


Q ss_pred             HHHHHh
Q 040896          277 RLARWK  282 (288)
Q Consensus       277 ~~~~~~  282 (288)
                      ++.+.+
T Consensus       215 ~~~~~~  220 (226)
T d2feaa1         215 NVKEVQ  220 (226)
T ss_dssp             TSHHHH
T ss_pred             HHHHHH
Confidence            876654

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.95  E-value=4.3e-06  Score=61.38  Aligned_cols=50  Identities=14%  Similarity=0.023  Sum_probs=39.6

Q ss_pred             EEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHh
Q 040896           23 VVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVS   73 (288)
Q Consensus        23 li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~   73 (288)
                      -|++|+||||+.... +..+.+-+.+.+.|++|.+.+ .|+|.|+|+-....
T Consensus         2 ti~vDiDGTl~~~~~-~~~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~   52 (122)
T d2obba1           2 TIAVDFDGTIVEHRY-PRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLD   52 (122)
T ss_dssp             EEEECCBTTTBCSCT-TSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHH
T ss_pred             EEEEEcCCCcCCCCC-CccccccHHHHHHHHHHHHCCCeEEEEecCCCcchH
Confidence            379999999997543 234556778999999999985 89999999875543

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.83  E-value=8.7e-06  Score=59.76  Aligned_cols=47  Identities=19%  Similarity=0.180  Sum_probs=37.9

Q ss_pred             EEEEEecCCccccCcC-CCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCC
Q 040896           22 IVVFLDYDGTLSPIVE-DPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRC   68 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~-~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~   68 (288)
                      |-|+||+||||+.... ......+-+.+++.|++|.+.+ .++|.|+|.
T Consensus         2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~   50 (124)
T d1xpja_           2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARN   50 (124)
T ss_dssp             CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CEEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence            4589999999997532 1235567789999999999885 899999996

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=4.1e-06  Score=67.78  Aligned_cols=61  Identities=25%  Similarity=0.273  Sum_probs=48.7

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC-C---ccceEEeCChhHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR-E---TKALYSLRDPDEV  271 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~-~---~~A~~~~~~~~~v  271 (288)
                      +..|+..++.+++.++++     +++++|||.||++|++.+     |++|++++... +   ..|++++.+..++
T Consensus       151 ~~~K~~~v~~~~~~~~~~-----~~~~vGDs~~Di~~~~~a-----g~~va~~~~~~~~~~~~~ad~~i~~f~el  215 (217)
T d1nnla_         151 SGGKGKVIKLLKEKFHFK-----KIIMIGDGATDMEACPPA-----DAFIGFGGNVIRQQVKDNAKWYITDFVEL  215 (217)
T ss_dssp             TTHHHHHHHHHHHHHCCS-----CEEEEESSHHHHTTTTTS-----SEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred             cchHHHHHHHHHhccCcc-----ccEEEEeCHhhHHHHHhC-----CceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence            456999999998887764     899999999999999999     89999975433 2   3588888776543

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.68  E-value=1.8e-05  Score=60.93  Aligned_cols=52  Identities=17%  Similarity=0.100  Sum_probs=38.5

Q ss_pred             cEEEEEecCCccccCcCC-------------------CCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhH
Q 040896           21 KIVVFLDYDGTLSPIVED-------------------PDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKV   72 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~-------------------~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l   72 (288)
                      .|+|+||+||||++....                   ...-.+-|.+.++|++|++++ .+++||+.+....
T Consensus         5 pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~   76 (164)
T d1u7pa_           5 PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQG   76 (164)
T ss_dssp             CSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHH
T ss_pred             CCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHHCCCcEEEEeccccchh
Confidence            489999999999862100                   011245678999999999995 9999998776543

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=97.28  E-value=0.00011  Score=56.36  Aligned_cols=47  Identities=17%  Similarity=0.173  Sum_probs=35.4

Q ss_pred             cEEEEEecCCccccCcC------CCCCCCCCHHHHHHHHHHhhcC-CEEEEcCC
Q 040896           21 KIVVFLDYDGTLSPIVE------DPDKAFMSDTMRMAVHEVAHFF-PTAIVSGR   67 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~------~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR   67 (288)
                      +|++|||.||||.....      ..++-.+-|.+.++|++|++.+ +++++|..
T Consensus         2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~i~TNq   55 (161)
T d2fpwa1           2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQ   55 (161)
T ss_dssp             CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred             CcEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHHHHcCCceeeeccc
Confidence            68999999999987321      1123355778999999999986 78888764

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=97.12  E-value=0.0002  Score=57.12  Aligned_cols=35  Identities=20%  Similarity=0.114  Sum_probs=30.0

Q ss_pred             CCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           42 AFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        42 ~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      ..+.|.+.+.|+.|++.+ .++++|+.+...+..++
T Consensus        74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l  109 (226)
T d2feaa1          74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLL  109 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHH
Confidence            346778899999999885 99999999999988876

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.00  E-value=7e-05  Score=65.60  Aligned_cols=60  Identities=18%  Similarity=0.181  Sum_probs=47.1

Q ss_pred             HhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCc---eEEEEecCCCC-------ccceEEeCChhHHHHHHHHHHH
Q 040896          213 DTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRG---YPIIVSSVPRE-------TKALYSLRDPDEVMSFLRRLAR  280 (288)
Q Consensus       213 ~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g---~~v~v~na~~~-------~~A~~~~~~~~~v~~~l~~~~~  280 (288)
                      +.++.+++   .++++||+.||++|.+.+     |   .+|+||.....       ..|++++++..++.++|..++.
T Consensus       309 ~~~~~~~~---~~~~vGD~~~D~~aak~A-----g~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~  378 (380)
T d1qyia_         309 QDNIVNKD---DVFIVGDSLADLLSAQKI-----GATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE  378 (380)
T ss_dssp             CTTCSCTT---TEEEEESSHHHHHHHHHH-----TCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTT
T ss_pred             HHhCCCCC---eEEEECCCHHHHHHHHHC-----CCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHHHHHHh
Confidence            34566666   899999999999999999     5   67777765321       2699999999999988876653

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.99  E-value=0.0009  Score=52.40  Aligned_cols=73  Identities=19%  Similarity=0.234  Sum_probs=57.9

Q ss_pred             EEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCC--C----CccceEEeCC
Q 040896          195 EIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVP--R----ETKALYSLRD  267 (288)
Q Consensus       195 eI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~--~----~~~A~~~~~~  267 (288)
                      ...+. +-.|...++.+++.++++++   +++++||+.+|+.+-+.+     |. ++.+..+.  .    +..+++++++
T Consensus       131 ~~~~~-~~~~p~~~~~~~~~~~~~~~---~~v~VGDs~~Di~aa~~a-----Gi~~i~v~~g~~~~~~l~~~~pd~vi~~  201 (210)
T d2ah5a1         131 GSSPE-APHKADVIHQALQTHQLAPE---QAIIIGDTKFDMLGARET-----GIQKLAITWGFGEQADLLNYQPDYIAHK  201 (210)
T ss_dssp             EECSS-CCSHHHHHHHHHHHTTCCGG---GEEEEESSHHHHHHHHHH-----TCEEEEESSSSSCHHHHHTTCCSEEESS
T ss_pred             ccccc-ccccccccchhhhhhhcccc---cceeecCCHHHHHHHHHc-----CCeEEEEcCCCCCHHHHHhCCCCEEECC
Confidence            33344 66889999999999999988   999999999999999988     64 67775432  1    1358899999


Q ss_pred             hhHHHHHHH
Q 040896          268 PDEVMSFLR  276 (288)
Q Consensus       268 ~~~v~~~l~  276 (288)
                      ..++.++|+
T Consensus       202 l~el~~~le  210 (210)
T d2ah5a1         202 PLEVLAYFQ  210 (210)
T ss_dssp             TTHHHHHTC
T ss_pred             HHHHHHHhC
Confidence            999888764

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=96.95  E-value=0.0003  Score=54.72  Aligned_cols=66  Identities=17%  Similarity=0.172  Sum_probs=49.1

Q ss_pred             HHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC--C---ccceEEeCChhHHHHHHHH
Q 040896          206 RALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR--E---TKALYSLRDPDEVMSFLRR  277 (288)
Q Consensus       206 ~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~--~---~~A~~~~~~~~~v~~~l~~  277 (288)
                      ..+..+++.++++++   +++++||+.+|+.+=+.+.   .+.++.+..+..  +   ..|+|++++..++.++|++
T Consensus       112 ~m~~~~~~~~~i~~~---~s~mVGDs~~Di~aA~~Ag---~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ikk  182 (182)
T d2gmwa1         112 GMLLSARDYLHIDMA---ASYMVGDKLEDMQAAVAAN---VGTKVLVRTGKPITPEAENAADWVLNSLADLPQAIKK  182 (182)
T ss_dssp             HHHHHHHHHHTBCGG---GCEEEESSHHHHHHHHHTT---CSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHHHC
T ss_pred             ccccchhhhcccccc---cccccCCCHHHHHHHHHhC---CCcEEEECCCCCCCcccccCCCEEECCHHHHHHHhcC
Confidence            347777888899887   9999999999988776661   123466665532  1   3599999999999988863

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=96.94  E-value=0.00036  Score=53.72  Aligned_cols=157  Identities=15%  Similarity=0.145  Sum_probs=101.0

Q ss_pred             EEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh---cCCCCeEEEccCceeEeCCCCC
Q 040896           22 IVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF---VQLKNVVYAGSHGMDISTPAGS   97 (288)
Q Consensus        22 ~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~---~~~~~~~~i~~nGa~i~~~~~~   97 (288)
                      .++++|.+|||+-..-    ..+.+.+.++|+.|++.+ +++++||=.......+   +|+..             .+..
T Consensus         3 ~~~~~d~~~~~~~~~~----Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~-------------~~~~   65 (168)
T d1wpga2           3 SVICSDKTGTLTTNQL----DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFG-------------ENEE   65 (168)
T ss_dssp             CEEEECCTTTTBCCCE----CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSC-------------TTCC
T ss_pred             EEEEECCccEEEEEec----CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCC-------------Cccc
Confidence            4678899999997422    245678999999999995 9999999998877765   45421             1111


Q ss_pred             cccCCCCCcccccccCCCceeccCCCccchhHHHHHHHHHHHHhhccCCeEEEecCceEEEeccCCCcccHHHHHHHHHH
Q 040896           98 LKQNNPKHETRTVDEQGNEVVHFQPAQEFLPQIQEMIQVLEEKIKTIKGATVEDNKFCISVHFRRVDEDDINTLQEMVNS  177 (288)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~  177 (288)
                      ...                     ...   .. .++    ..                       ...       ....+
T Consensus        66 v~~---------------------~~~---~~-~~~----~~-----------------------~~~-------~~~~~   86 (168)
T d1wpga2          66 VAD---------------------RAY---TG-REF----DD-----------------------LPL-------AEQRE   86 (168)
T ss_dssp             CTT---------------------TEE---EH-HHH----HH-----------------------SCH-------HHHHH
T ss_pred             ccc---------------------ccc---cc-ccc----ch-----------------------hhH-------HHHhh
Confidence            000                     000   00 000    00                       000       01122


Q ss_pred             HHHhCCCeEEeCCceEEEEeCCCCCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC
Q 040896          178 IVEAYPNFRISGGKKVMEIRPCIDWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR  257 (288)
Q Consensus       178 ~~~~~~~~~~~~~~~~ieI~~~~~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~  257 (288)
                      ..++.        ..|-++.|.   .|..-++.+.+. |   .   .|.++||+.||.++|+.+     ..||+|+++..
T Consensus        87 ~~~~~--------~v~ar~~p~---~K~~lv~~l~~~-g---~---~Va~vGDG~nD~~AL~~A-----dvGIa~~~gt~  143 (168)
T d1wpga2          87 ACRRA--------CCFARVEPS---HKSKIVEYLQSY-D---E---ITAMTGDGVNDAPALKKA-----EIGIAMGSGTA  143 (168)
T ss_dssp             HHHHC--------CEEESCCHH---HHHHHHHHHHHT-T---C---CEEEEECSGGGHHHHHHS-----SEEEEETTSCH
T ss_pred             hhhhh--------hhhhccchh---HHHHHHHHHHhc-c---c---ceeEEecCCCCHHHHHhC-----CEEEEeccccH
Confidence            22322        135566676   788888877665 3   3   889999999999999999     69999997754


Q ss_pred             --CccceEEeCC--hhHHHHHHHH
Q 040896          258 --ETKALYSLRD--PDEVMSFLRR  277 (288)
Q Consensus       258 --~~~A~~~~~~--~~~v~~~l~~  277 (288)
                        +..|++++.+  ...|.+.|++
T Consensus       144 ~a~~aAdivl~~~~l~~v~~~I~~  167 (168)
T d1wpga2         144 VAKTASEMVLADDNFSTIVAAVEE  167 (168)
T ss_dssp             HHHHTCSEEETTCCTHHHHHHHHH
T ss_pred             HHHHhCCEEEccCCHHHHHHHHHc
Confidence              3579988753  6677777653

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.00045  Score=55.20  Aligned_cols=43  Identities=12%  Similarity=0.125  Sum_probs=33.0

Q ss_pred             CCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhh---cCCCCeEEEc
Q 040896           43 FMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRF---VQLKNVVYAG   85 (288)
Q Consensus        43 ~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~---~~~~~~~~i~   85 (288)
                      .+.|.+.++|++|++++ +++|+||-....+.++   +|++...+++
T Consensus        82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~a  128 (217)
T d1nnla_          82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFA  128 (217)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEE
T ss_pred             ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceee
Confidence            45689999999999995 8999999988877765   5665333444

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=96.76  E-value=0.00043  Score=55.24  Aligned_cols=66  Identities=21%  Similarity=0.167  Sum_probs=46.0

Q ss_pred             HHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCCC---ccceEEeCChhHHHHHHHHHH
Q 040896          206 RALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPRE---TKALYSLRDPDEVMSFLRRLA  279 (288)
Q Consensus       206 ~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~~---~~A~~~~~~~~~v~~~l~~~~  279 (288)
                      ..+...++.++++++   +++++||+.+|+.+=+.+     |. ++.+.++...   ..+...+.+..++..+++.+=
T Consensus       133 ~ml~~a~~~~~i~~~---~~~~VGD~~~Di~aA~~A-----Gi~~i~v~~g~~~~~~~~~~~~~~~~~e~~dll~~v~  202 (209)
T d2o2xa1         133 GMLVEAGKRLALDLQ---RSLIVGDKLADMQAGKRA-----GLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAIE  202 (209)
T ss_dssp             HHHHHHHHHHTCCGG---GCEEEESSHHHHHHHHHT-----TCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHHH
T ss_pred             hhhhHhHHHhCCCcc---ceEEeCCCHHHHHHHHHC-----CCcEEEEeCCCCcccCCccccCccchhHHHHHHHHHH
Confidence            457777888899887   999999999999987777     54 6667655432   233334556666776665443

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=96.56  E-value=0.00064  Score=53.36  Aligned_cols=62  Identities=16%  Similarity=0.191  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceE-EEEecCC--C--CccceEEeCChhHHHH
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYP-IIVSSVP--R--ETKALYSLRDPDEVMS  273 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~-v~v~na~--~--~~~A~~~~~~~~~v~~  273 (288)
                      +...++.+++++|++++   +++++||+.+|+.+=..+     |+. +.+..+.  .  ...+++++.+..++.+
T Consensus       139 ~p~~~~~~~~~~~~~~~---~~l~VgDs~~Di~~a~~a-----G~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~  205 (207)
T d2hdoa1         139 DPLPLLTALEKVNVAPQ---NALFIGDSVSDEQTAQAA-----NVDFGLAVWGMDPNADHQKVAHRFQKPLDILE  205 (207)
T ss_dssp             SSHHHHHHHHHTTCCGG---GEEEEESSHHHHHHHHHH-----TCEEEEEGGGCCTTGGGSCCSEEESSGGGGGG
T ss_pred             hhhhhcccccceeeecc---ceeEecCCHHHHHHHHHc-----CCeEEEEecCCCChhHhhhcCcEeCCHHHHHh
Confidence            45677888888888877   999999999999988877     554 4454332  2  1467788887776654

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=96.49  E-value=0.0014  Score=51.56  Aligned_cols=58  Identities=16%  Similarity=0.075  Sum_probs=42.8

Q ss_pred             HHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCc-eEEEEecCCC--C---ccceEEeCChhHH
Q 040896          206 RALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRG-YPIIVSSVPR--E---TKALYSLRDPDEV  271 (288)
Q Consensus       206 ~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g-~~v~v~na~~--~---~~A~~~~~~~~~v  271 (288)
                      ...+.++++++++++   ++++|||+.+|+.+-+.+     | .+|.+.....  .   ..|++++++..++
T Consensus       148 ~~~~~~~~~l~~~~~---~~l~igD~~~di~aA~~~-----G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el  211 (218)
T d1te2a_         148 QVYLDCAAKLGVDPL---TCVALEDSVNGMIASKAA-----RMRSIVVPAPEAQNDPRFVLANVKLSSLTEL  211 (218)
T ss_dssp             HHHHHHHHHHTSCGG---GEEEEESSHHHHHHHHHT-----TCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred             HHHHHHHHHcCCCch---hcEEEeeCHHHHHHHHHc-----CCEEEEECCCCCccchhhcCCCEEECChhhC
Confidence            445567777888877   999999999999988888     5 4566654422  1   4688888887664

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.46  E-value=0.00091  Score=52.62  Aligned_cols=48  Identities=21%  Similarity=0.207  Sum_probs=34.7

Q ss_pred             CCcEEEEEecCCccccCc------CCCCCC-CCCHHHHHHHHHHhhcC-CEEEEcC
Q 040896           19 GKKIVVFLDYDGTLSPIV------EDPDKA-FMSDTMRMAVHEVAHFF-PTAIVSG   66 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~------~~~~~~-~i~~~~~~aL~~L~~~~-~v~i~TG   66 (288)
                      .+.|+++||.||||....      .++.+- .+.+.+.++|++|.+++ .++|+|-
T Consensus        19 ~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~~~gy~iiIvTN   74 (195)
T d1yj5a1          19 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTN   74 (195)
T ss_dssp             CCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHHHHTCEEEEEEE
T ss_pred             CcCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHHHhCCcEEEEecC
Confidence            456888999999997532      112221 24688999999999986 7888874

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=96.41  E-value=0.0013  Score=51.77  Aligned_cols=65  Identities=18%  Similarity=0.264  Sum_probs=49.5

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCc-eEEEEecCCC------CccceEEeCChhHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRG-YPIIVSSVPR------ETKALYSLRDPDEVMSFL  275 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g-~~v~v~na~~------~~~A~~~~~~~~~v~~~l  275 (288)
                      .|......+++.++++++   ++++|||+.+|+.+-+.+     | .+|.+..+..      +..+++++.+..++.+.|
T Consensus       152 p~p~~~~~~~~~~~~~~~---~~~~igD~~~Di~~A~~a-----G~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ii  223 (224)
T d2hsza1         152 PHPAPFYYLCGKFGLYPK---QILFVGDSQNDIFAAHSA-----GCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT  223 (224)
T ss_dssp             TSSHHHHHHHHHHTCCGG---GEEEEESSHHHHHHHHHH-----TCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred             ccchhhHHHHHHhhhhhh---ccchhcCcHHHHHHHHHc-----CCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHhh
Confidence            455567778888888877   999999999999988888     5 4777765421      135889999988877655

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.36  E-value=0.0026  Score=51.14  Aligned_cols=69  Identities=19%  Similarity=0.311  Sum_probs=46.9

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCceEEEE-ecCCCCccceEEeCCh--hHHHHHH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIV-SSVPRETKALYSLRDP--DEVMSFL  275 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v-~na~~~~~A~~~~~~~--~~v~~~l  275 (288)
                      |-.|..+++.++...++.     ..+++|||..|.+||+.++..+ |.+|+- ||-..-..|+..+-++  -.++-.+
T Consensus       183 gg~k~~i~~~~~~~~~~~-----~~~~VGDSITDve~Lr~~r~~g-GlaIsFNGN~Yal~eA~VaiiS~~~~a~~~i~  254 (308)
T d1y8aa1         183 AGEKAKIMRGYCESKGID-----FPVVVGDSISDYKMFEAARGLG-GVAIAFNGNEYALKHADVVIISPTAMSEAKVI  254 (308)
T ss_dssp             HHHHHHHHHHHHHHHTCS-----SCEEEECSGGGHHHHHHHHHTT-CEEEEESCCHHHHTTCSEEEECSSTHHHHHHH
T ss_pred             CchhHHHHHhhcccccCC-----cceeccCccccHHHHHHHhcCC-CeeEEecCccccccccceEEeccchhHHHHHH
Confidence            456777788888888886     5699999999999999999765 677764 3332224555444333  3444434

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=96.29  E-value=0.0017  Score=50.22  Aligned_cols=49  Identities=22%  Similarity=0.229  Sum_probs=38.1

Q ss_pred             cEEEEEecCCccccCc---CCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCCh
Q 040896           21 KIVVFLDYDGTLSPIV---EDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCL   69 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~---~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~   69 (288)
                      .+.+|||+||||....   ..+++-++-+.+.++|++|++.+ .++++|.++.
T Consensus         2 ~~Av~~DrDGtl~~~~~y~~~~~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~   54 (182)
T d2gmwa1           2 VPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSG   54 (182)
T ss_dssp             BCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTH
T ss_pred             CCEEEEeCCCCccCCCCCCCCHHHeeECCCHHHHHHHHhhcCchhhhhhccch
Confidence            5789999999997521   12234466788999999999986 8999998773

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.23  E-value=0.00069  Score=52.65  Aligned_cols=17  Identities=35%  Similarity=0.643  Sum_probs=15.3

Q ss_pred             cCCcEEEEEecCCcccc
Q 040896           18 KGKKIVVFLDYDGTLSP   34 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~   34 (288)
                      ++++|+++||+||||++
T Consensus         1 ~~kkKlv~FDlDGTL~d   17 (210)
T d1j97a_           1 EKKKKLILFDFDSTLVN   17 (210)
T ss_dssp             CCCCCEEEECCCCCCBS
T ss_pred             CCCCeEEEEeCCCCcCC
Confidence            36789999999999998

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.97  E-value=0.0095  Score=47.44  Aligned_cols=70  Identities=16%  Similarity=0.116  Sum_probs=54.2

Q ss_pred             CCCH--HHHHHHHHHhcCCCCCCCceeEEEcCCc-ccHHHHHHHHhcCCce-EEEEecC--CC----CccceEEeCChhH
Q 040896          201 DWDK--GRALEYLLDTFGFNNASDFLPLYIGDDK-TDEDAFKVIRHMGRGY-PIIVSSV--PR----ETKALYSLRDPDE  270 (288)
Q Consensus       201 ~~sK--g~al~~l~~~~~~~~~~~~~vv~~GDs~-ND~~Ml~~~~~~~~g~-~v~v~na--~~----~~~A~~~~~~~~~  270 (288)
                      +..|  ....+.+++++|++++   +++++||+. +|+.+-..+     |. ++.+-+.  ..    ...++|++.+..+
T Consensus       161 ~~~KP~p~~~~~~~~~~~~~~~---~~l~iGD~~~~Di~~A~~~-----G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~e  232 (247)
T d2gfha1         161 KEEKPAPSIFYHCCDLLGVQPG---DCVMVGDTLETDIQGGLNA-----GLKATVWINKSGRVPLTSSPMPHYMVSSVLE  232 (247)
T ss_dssp             SSCTTCHHHHHHHHHHHTCCGG---GEEEEESCTTTHHHHHHHT-----TCSEEEEECTTCCCCSSCCCCCSEEESSGGG
T ss_pred             ccchhhhhhHHHHHHHhhcCHH---hcceeccChHhHHHHHHHc-----CCeEEEEECCCCCCcccccCCCCEEECCHHH
Confidence            4556  6788999999999987   999999995 899987777     66 3544332  11    2468899999999


Q ss_pred             HHHHHHHH
Q 040896          271 VMSFLRRL  278 (288)
Q Consensus       271 v~~~l~~~  278 (288)
                      +.++|+++
T Consensus       233 L~~ll~~i  240 (247)
T d2gfha1         233 LPALLQSI  240 (247)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999876

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.93  E-value=0.0077  Score=47.61  Aligned_cols=67  Identities=24%  Similarity=0.372  Sum_probs=52.0

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCC-cccHHHHHHHHhcCCce-EEEEecCCC----CccceEEeCChhHHHHHHHH
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDD-KTDEDAFKVIRHMGRGY-PIIVSSVPR----ETKALYSLRDPDEVMSFLRR  277 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs-~ND~~Ml~~~~~~~~g~-~v~v~na~~----~~~A~~~~~~~~~v~~~l~~  277 (288)
                      +....+.+++++|++++   +++.|||+ .+|+.+=..+     |+ +|.+.....    ...++|++++..++..+|++
T Consensus       157 ~~~~~~~~~~~l~~~p~---~~l~vgD~~~~Di~~A~~~-----G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~  228 (230)
T d1x42a1         157 HPRIFELALKKAGVKGE---EAVYVGDNPVKDCGGSKNL-----GMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDE  228 (230)
T ss_dssp             SHHHHHHHHHHHTCCGG---GEEEEESCTTTTHHHHHTT-----TCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHHHH
T ss_pred             hhHHHHHHHhhhccccc---ccceeecCcHhHHHHHHHc-----CCEEEEECCCCCCcccccCCCEEECCHHHHHHHHHH
Confidence            46779999999999987   99999999 6898866665     54 455543322    24789999999999999987


Q ss_pred             H
Q 040896          278 L  278 (288)
Q Consensus       278 ~  278 (288)
                      |
T Consensus       229 l  229 (230)
T d1x42a1         229 L  229 (230)
T ss_dssp             H
T ss_pred             c
Confidence            5

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=95.83  E-value=0.0018  Score=50.02  Aligned_cols=58  Identities=17%  Similarity=0.119  Sum_probs=41.7

Q ss_pred             CCcEEEEEecCCccccCc-----CCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           19 GKKIVVFLDYDGTLSPIV-----EDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~-----~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      ++.|+++||+||+|++-.     ....-...+..--.+|+.|+..+ .++++||+....+....
T Consensus         3 ~~ik~~i~DvDGVlTDG~v~~~~dG~e~k~F~~~Dg~gi~~l~~~gi~~~iis~~~~~~v~~~~   66 (177)
T d1k1ea_           3 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRI   66 (177)
T ss_dssp             GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHH
T ss_pred             ccCeEEEEccCCcccCCeEEEeCCCCEEEEEECcchHHHHHHhhhcEEEEEecCCchhHHHHHH
Confidence            357999999999999721     00011234455567899999885 89999999988877754

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.73  E-value=0.0046  Score=47.48  Aligned_cols=14  Identities=29%  Similarity=0.171  Sum_probs=12.6

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .+.++||+||||++
T Consensus         3 ~k~viFD~DGTL~d   16 (187)
T d2fi1a1           3 YHDYIWDLGGTLLD   16 (187)
T ss_dssp             CSEEEECTBTTTBC
T ss_pred             CCEEEEeCCCCccc
Confidence            57899999999997

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.62  E-value=0.0035  Score=48.70  Aligned_cols=63  Identities=21%  Similarity=0.293  Sum_probs=46.6

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCCCccceEEeCChhHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPRETKALYSLRDPDEVMSFL  275 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~~~~A~~~~~~~~~v~~~l  275 (288)
                      .|....+.+++.++++++   +++++||+.+|+.+-+.+     |. +|.+.+.  ...+++.+.+..++.+++
T Consensus       138 p~~~~~~~~~~~~~~~p~---~~l~VgD~~~Di~~A~~~-----G~~~i~v~~~--~~~~~~~~~~~~dl~~l~  201 (204)
T d2go7a1         138 PSPEAATYLLDKYQLNSD---NTYYIGDRTLDVEFAQNS-----GIQSINFLES--TYEGNHRIQALADISRIF  201 (204)
T ss_dssp             TSSHHHHHHHHHHTCCGG---GEEEEESSHHHHHHHHHH-----TCEEEESSCC--SCTTEEECSSTTHHHHHT
T ss_pred             hhHHHHHHHHHHhCCCCc---eEEEEeCCHHHHHHHHHc-----CCeEEEEcCC--CCCcCeecCCHHHHHHHh
Confidence            456778888888999877   999999999999998888     65 4555433  235667777766665544

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=95.22  E-value=0.0053  Score=47.99  Aligned_cols=30  Identities=17%  Similarity=0.217  Sum_probs=20.7

Q ss_pred             CcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc
Q 040896           20 KKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF   58 (288)
Q Consensus        20 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~   58 (288)
                      +-|+|+||+||||++.     .    +...++++++.+.
T Consensus         3 ~~k~iiFD~DGTL~Ds-----~----~~~~~a~~~~~~~   32 (224)
T d2hsza1           3 QFKLIGFDLDGTLVNS-----L----PDLALSINSALKD   32 (224)
T ss_dssp             SCSEEEECSBTTTEEC-----H----HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCcccC-----H----HHHHHHHHHHHHH
Confidence            4689999999999982     1    3445566555544

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=95.19  E-value=0.005  Score=48.28  Aligned_cols=70  Identities=17%  Similarity=0.162  Sum_probs=50.1

Q ss_pred             HHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCc-eEEEEecCCCCccceEEeCCh-hHHHHHHHHHHHHh
Q 040896          205 GRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRG-YPIIVSSVPRETKALYSLRDP-DEVMSFLRRLARWK  282 (288)
Q Consensus       205 g~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g-~~v~v~na~~~~~A~~~~~~~-~~v~~~l~~~~~~~  282 (288)
                      ....+.+++.+|++++   ++++|||+.+|+.+-+.+     | -+|.|+++.....+..++++. +-..+.|.+++-.|
T Consensus       148 ~~~~~~~l~~~~i~~~---~~l~VgD~~~di~~A~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~l~el~~~~  219 (221)
T d1o08a_         148 PDIFIAAAHAVGVAPS---ESIGLEDSQAGIQAIKDS-----GALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVWLQK  219 (221)
T ss_dssp             THHHHHHHHHTTCCGG---GEEEEESSHHHHHHHHHH-----TCEEEEESCHHHHCSSSEEESSGGGCCHHHHHHHHHSS
T ss_pred             hHHHHHHHHHcCCCCc---eEEEEecCHHHHHHHHHc-----CCEEEEECChhhcccccEEcCCcccCCHHHHHHHHHhc
Confidence            5678999999999987   999999999999988877     5 467777543333455455553 23456666665544

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.09  E-value=0.011  Score=46.56  Aligned_cols=67  Identities=18%  Similarity=0.138  Sum_probs=48.8

Q ss_pred             HHHHHHHHHhc--CCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecC--CC----CccceEEeCChhHHHHHH
Q 040896          205 GRALEYLLDTF--GFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSV--PR----ETKALYSLRDPDEVMSFL  275 (288)
Q Consensus       205 g~al~~l~~~~--~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na--~~----~~~A~~~~~~~~~v~~~l  275 (288)
                      ..++..+.+..  +++++   ++++|||+.+|+.+-..+     |+ +|.|..+  ..    +..|++++++..++.++|
T Consensus       152 ~~~~~~~~~~~~~~~~p~---~~l~VGD~~~Di~aA~~a-----G~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l  223 (228)
T d2hcfa1         152 HIALERARRMTGANYSPS---QIVIIGDTEHDIRCAREL-----DARSIAVATGNFTMEELARHKPGTLFKNFAETDEVL  223 (228)
T ss_dssp             HHHHHHHHHHHCCCCCGG---GEEEEESSHHHHHHHHTT-----TCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred             HHHHHHhhhhcccCCChh---HheeecCChHHHHHHHHc-----CCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHH
Confidence            44565665554  56666   999999999999887777     53 4666533  32    236899999999999999


Q ss_pred             HHHH
Q 040896          276 RRLA  279 (288)
Q Consensus       276 ~~~~  279 (288)
                      ..++
T Consensus       224 ~~l~  227 (228)
T d2hcfa1         224 ASIL  227 (228)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8875

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.09  E-value=0.0032  Score=49.83  Aligned_cols=15  Identities=40%  Similarity=0.678  Sum_probs=13.7

Q ss_pred             CcEEEEEecCCcccc
Q 040896           20 KKIVVFLDYDGTLSP   34 (288)
Q Consensus        20 ~~~li~~DlDGTL~~   34 (288)
                      .+|+|+||+||||++
T Consensus         1 ~~klviFD~DGTL~d   15 (228)
T d2hcfa1           1 SRTLVLFDIDGTLLK   15 (228)
T ss_dssp             CCEEEEECCBTTTEE
T ss_pred             CceEEEEeCCCCccc
Confidence            369999999999998

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.04  E-value=0.019  Score=44.74  Aligned_cols=69  Identities=12%  Similarity=0.091  Sum_probs=54.1

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCC--C--------ccceEEeCChhHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPR--E--------TKALYSLRDPDEV  271 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~--~--------~~A~~~~~~~~~v  271 (288)
                      .+.......++.++++++   ++++|||+.+|+.+=+.+     |+ +|.+.++..  .        .-|++++++..++
T Consensus       142 P~~~~~~~~~~~l~~~p~---~~l~vgDs~~dv~aA~~a-----G~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL  213 (222)
T d2fdra1         142 PKPDIFLHGAAQFGVSPD---RVVVVEDSVHGIHGARAA-----GMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL  213 (222)
T ss_dssp             TSSHHHHHHHHHHTCCGG---GEEEEESSHHHHHHHHHT-----TCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGH
T ss_pred             cCHHHHHHHHHhhCCCCc---eEEEEcCCHHHHHHHHHc-----CCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHH
Confidence            456788999999999988   999999999998776666     54 566766532  1        1388999999999


Q ss_pred             HHHHHHHH
Q 040896          272 MSFLRRLA  279 (288)
Q Consensus       272 ~~~l~~~~  279 (288)
                      ..+|++++
T Consensus       214 ~~ll~~l~  221 (222)
T d2fdra1         214 PAVIAAMA  221 (222)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhc
Confidence            99888764

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.88  E-value=0.016  Score=44.52  Aligned_cols=59  Identities=15%  Similarity=0.216  Sum_probs=44.5

Q ss_pred             cCCcEEEEEecCCccccCcCCCCC------------------CCCCHHHHHHHHHHhhcCCEEEEcCCChhhHhhhc
Q 040896           18 KGKKIVVFLDYDGTLSPIVEDPDK------------------AFMSDTMRMAVHEVAHFFPTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~~~~~~~~------------------~~i~~~~~~aL~~L~~~~~v~i~TGR~~~~l~~~~   76 (288)
                      +++++.+++|||+||+.....+..                  -...|.+.+.|+.+.+.-.|+|-|.-+..-+..++
T Consensus        12 ~~~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il   88 (181)
T d1ta0a_          12 DSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVA   88 (181)
T ss_dssp             GTTSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHH
T ss_pred             cCCCeEEEEeCCCCEEccccCCCCCccceeeecccceeeeeEEecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHH
Confidence            457789999999999963221110                  01378899999999988888888988887777765

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=94.80  E-value=0.0091  Score=47.03  Aligned_cols=60  Identities=17%  Similarity=0.180  Sum_probs=40.1

Q ss_pred             HHHHHHhhcCC-cEEEEEecCCccccCcCC---------C--------------------CCCCCCHHHHHHHHHHhhcC
Q 040896           10 FDRMVAAAKGK-KIVVFLDYDGTLSPIVED---------P--------------------DKAFMSDTMRMAVHEVAHFF   59 (288)
Q Consensus        10 ~~~~~~~~~~~-~~li~~DlDGTL~~~~~~---------~--------------------~~~~i~~~~~~aL~~L~~~~   59 (288)
                      .+++......+ ...|+||+|.|+|+....         +                    ..+..-+.+++.|+.+++++
T Consensus        23 ~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~~G  102 (209)
T d2b82a1          23 VAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRG  102 (209)
T ss_dssp             HHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHT
T ss_pred             HHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHHcC
Confidence            45555555444 469999999999983210         0                    01123346888888888885


Q ss_pred             -CEEEEcCCCh
Q 040896           60 -PTAIVSGRCL   69 (288)
Q Consensus        60 -~v~i~TGR~~   69 (288)
                       .|+.+|||+.
T Consensus       103 v~IfyVTnR~~  113 (209)
T d2b82a1         103 DAIFFVTGRSP  113 (209)
T ss_dssp             CEEEEEECSCC
T ss_pred             CeEEEEeCCch
Confidence             8999999875

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=94.69  E-value=0.028  Score=44.87  Aligned_cols=66  Identities=14%  Similarity=0.083  Sum_probs=48.0

Q ss_pred             HHHHHHHHhcCCC-CCCCceeEEEcCCcccHHHHHHHHhcCCceEEEEecCCC---------------------------
Q 040896          206 RALEYLLDTFGFN-NASDFLPLYIGDDKTDEDAFKVIRHMGRGYPIIVSSVPR---------------------------  257 (288)
Q Consensus       206 ~al~~l~~~~~~~-~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~~v~v~na~~---------------------------  257 (288)
                      ......++++++. .+   ++++|||+.+|+.+=+.+.    -.+|.|.-+..                           
T Consensus       160 ~~~~~~~~~l~~~p~~---~~v~VgDs~~Di~aA~~aG----~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (257)
T d1swva_         160 WMCYKNAMELGVYPMN---HMIKVGDTVSDMKEGRNAG----MWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNR  232 (257)
T ss_dssp             HHHHHHHHHHTCCSGG---GEEEEESSHHHHHHHHHTT----SEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCcc---eEEEEeCChhhHHHHHHCC----CEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHH
Confidence            4577778888884 46   8999999999998877772    24676744321                           


Q ss_pred             --CccceEEeCChhHHHHHHHHH
Q 040896          258 --ETKALYSLRDPDEVMSFLRRL  278 (288)
Q Consensus       258 --~~~A~~~~~~~~~v~~~l~~~  278 (288)
                        +..|+|++++..++...|+.+
T Consensus       233 l~~~gad~vi~~l~eL~~ii~~~  255 (257)
T d1swva_         233 FVENGAHFTIETMQELESVMEHI  255 (257)
T ss_dssp             HHHTTCSEEESSGGGHHHHHHHH
T ss_pred             HHhCCCCEEECCHHHHHHHHHHH
Confidence              012899999999888888654

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=94.60  E-value=0.015  Score=44.75  Aligned_cols=14  Identities=43%  Similarity=0.544  Sum_probs=12.2

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      +++++||+||||++
T Consensus         1 ~~a~iFD~DGTL~d   14 (204)
T d2go7a1           1 KTAFIWDLDGTLLD   14 (204)
T ss_dssp             CCEEEECTBTTTEE
T ss_pred             CEEEEEcCCCcCcc
Confidence            35789999999998

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=94.57  E-value=0.0078  Score=46.73  Aligned_cols=29  Identities=24%  Similarity=0.345  Sum_probs=20.2

Q ss_pred             cEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc
Q 040896           21 KIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF   58 (288)
Q Consensus        21 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~   58 (288)
                      .|+|+||+||||++     +.    +...++++++.+.
T Consensus         3 ~k~viFD~DGTL~d-----s~----~~~~~a~~~~~~~   31 (207)
T d2hdoa1           3 YQALMFDIDGTLTN-----SQ----PAYTTVMREVLAT   31 (207)
T ss_dssp             CSEEEECSBTTTEE-----CH----HHHHHHHHHHHHT
T ss_pred             CcEEEEeCCCCcCc-----CH----HHHHHHHHHHHHH
Confidence            47899999999998     21    3455666666544

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=94.26  E-value=0.0049  Score=47.90  Aligned_cols=15  Identities=40%  Similarity=0.676  Sum_probs=13.4

Q ss_pred             CcEEEEEecCCcccc
Q 040896           20 KKIVVFLDYDGTLSP   34 (288)
Q Consensus        20 ~~~li~~DlDGTL~~   34 (288)
                      +.+.|+||+||||++
T Consensus         3 ~ik~VifD~DGTL~d   17 (210)
T d2ah5a1           3 SITAIFFDLDGTLVD   17 (210)
T ss_dssp             TCCEEEECSBTTTEE
T ss_pred             CCCEEEEeCCCcccc
Confidence            468899999999998

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=93.72  E-value=0.065  Score=41.96  Aligned_cols=50  Identities=24%  Similarity=0.345  Sum_probs=37.8

Q ss_pred             CCcEEEEEecCCccccCc---CCCCCCCCCHHHHHHHHHHhhcC-CEEEEcCCC
Q 040896           19 GKKIVVFLDYDGTLSPIV---EDPDKAFMSDTMRMAVHEVAHFF-PTAIVSGRC   68 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~---~~~~~~~i~~~~~~aL~~L~~~~-~v~i~TGR~   68 (288)
                      .+.+.||||.||||....   .++.+-.+-|.+.++|++|++++ .++|+|-++
T Consensus        21 ~~~~Aif~DrDGtl~~~~~y~~~~~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~   74 (209)
T d2o2xa1          21 PHLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQS   74 (209)
T ss_dssp             SSCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHHTCCEEEEEECH
T ss_pred             CCCCEEEEeCCCCeECCCCCCCCHHHeEecccHHHHHHHHHhhCCeEEEecccc
Confidence            345789999999997521   22234467789999999999996 899999543

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=93.67  E-value=0.046  Score=42.21  Aligned_cols=65  Identities=12%  Similarity=0.240  Sum_probs=48.8

Q ss_pred             CCCHH--HHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCC---C--CccceEEeCChhHHH
Q 040896          201 DWDKG--RALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVP---R--ETKALYSLRDPDEVM  272 (288)
Q Consensus       201 ~~sKg--~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~---~--~~~A~~~~~~~~~v~  272 (288)
                      +..|-  ...+..++++|++++   +++++||+.+|+..=+.+     |+ ++.+....   .  ...+++++++..++.
T Consensus       146 ~~~KP~p~~~~~~~~~~g~~p~---e~l~VgD~~~Di~~A~~a-----G~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~  217 (220)
T d1zrna_         146 QVYKPDNRVYELAEQALGLDRS---AILFVASNAWDATGARYF-----GFPTCWINRTGNVFEEMGQTPDWEVTSLRAVV  217 (220)
T ss_dssp             TCCTTSHHHHHHHHHHHTSCGG---GEEEEESCHHHHHHHHHH-----TCCEEEECTTCCCCCSSSCCCSEEESSHHHHH
T ss_pred             eccccHHHHHHHHHHHhCCCCc---eEEEEecChHhHHHHHHc-----CCEEEEEcCCCCCcccccCCCCEEECCHHHHH
Confidence            45565  588999999999988   999999999998877777     65 56664331   1  246889888877765


Q ss_pred             H
Q 040896          273 S  273 (288)
Q Consensus       273 ~  273 (288)
                      +
T Consensus       218 ~  218 (220)
T d1zrna_         218 E  218 (220)
T ss_dssp             T
T ss_pred             h
Confidence            4

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.13  E-value=0.056  Score=41.48  Aligned_cols=25  Identities=20%  Similarity=0.041  Sum_probs=19.8

Q ss_pred             CHHHHHHHHHHhhc-C-CEEEEcCCCh
Q 040896           45 SDTMRMAVHEVAHF-F-PTAIVSGRCL   69 (288)
Q Consensus        45 ~~~~~~aL~~L~~~-~-~v~i~TGR~~   69 (288)
                      -+.+.++|++|.+. + .+.++|.|+.
T Consensus        76 ~~gA~e~l~~L~~~~~~~v~i~t~~~~  102 (195)
T d1q92a_          76 LPGAVEAVKEMASLQNTDVFICTSPIK  102 (195)
T ss_dssp             CTTHHHHHHHHHHSTTEEEEEEECCCS
T ss_pred             ccCHHHHHHHHhhccCccceEEccccc
Confidence            36789999999986 3 5788999874

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.92  E-value=0.062  Score=44.38  Aligned_cols=34  Identities=12%  Similarity=0.133  Sum_probs=23.8

Q ss_pred             CCCHHHHHHHHHHhhcC-CEEEEcCCChhhHhhhc
Q 040896           43 FMSDTMRMAVHEVAHFF-PTAIVSGRCLDKVSRFV   76 (288)
Q Consensus        43 ~i~~~~~~aL~~L~~~~-~v~i~TGR~~~~l~~~~   76 (288)
                      .+.+...+.++.|++++ +++|+||--..-+.+++
T Consensus       135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl  169 (291)
T d2bdua1         135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVI  169 (291)
T ss_dssp             CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH
T ss_pred             CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH
Confidence            44666677777777774 88888887776666654

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=92.88  E-value=0.03  Score=43.39  Aligned_cols=15  Identities=27%  Similarity=0.476  Sum_probs=13.5

Q ss_pred             CcEEEEEecCCcccc
Q 040896           20 KKIVVFLDYDGTLSP   34 (288)
Q Consensus        20 ~~~li~~DlDGTL~~   34 (288)
                      +.+.++||+||||++
T Consensus         2 ~i~a~iFD~DGTL~d   16 (218)
T d1te2a_           2 QILAAIFDMDGLLID   16 (218)
T ss_dssp             CCCEEEECCBTTTBC
T ss_pred             cceEEEECCCCcccC
Confidence            568899999999997

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.87  E-value=0.011  Score=46.98  Aligned_cols=35  Identities=20%  Similarity=0.180  Sum_probs=22.4

Q ss_pred             CCcEEEEEecCCccccCcCCCCCCCCCHHHHHHHHHHhhc
Q 040896           19 GKKIVVFLDYDGTLSPIVEDPDKAFMSDTMRMAVHEVAHF   58 (288)
Q Consensus        19 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~aL~~L~~~   58 (288)
                      ++.|.|+||+||||++.     .........++++.+...
T Consensus         4 ~~IKaviFD~dGTL~d~-----~~~~~~~~~~~~~~~~~~   38 (247)
T d2gfha1           4 SRVRAVFFDLDNTLIDT-----AGASRRGMLEVIKLLQSK   38 (247)
T ss_dssp             CCCCEEEECCBTTTBCH-----HHHHHHHHHHHHHHHHHT
T ss_pred             CCCcEEEEcCCCCcCcC-----hHHHHHHHHHHHHHhccc
Confidence            56899999999999972     222233344555555443

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.88  E-value=0.017  Score=45.07  Aligned_cols=13  Identities=31%  Similarity=0.562  Sum_probs=11.9

Q ss_pred             EEEEEecCCcccc
Q 040896           22 IVVFLDYDGTLSP   34 (288)
Q Consensus        22 ~li~~DlDGTL~~   34 (288)
                      ++|+||+||||++
T Consensus         3 kaviFD~DGtL~d   15 (222)
T d2fdra1           3 DLIIFDCDGVLVD   15 (222)
T ss_dssp             SEEEECSBTTTBC
T ss_pred             eEEEECCCCcccC
Confidence            6789999999998

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=91.80  E-value=0.16  Score=39.51  Aligned_cols=65  Identities=12%  Similarity=0.247  Sum_probs=49.4

Q ss_pred             HHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCC-------------------------C--
Q 040896          206 RALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVP-------------------------R--  257 (288)
Q Consensus       206 ~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~-------------------------~--  257 (288)
                      ...+..++.+|++++   +++++||+.+|+..=+.+     |+ +|.+....                         .  
T Consensus       151 ~~f~~a~~~lg~~p~---e~l~VgD~~~di~~A~~a-----G~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (245)
T d1qq5a_         151 DSYALVEEVLGVTPA---EVLFVSSNGFDVGGAKNF-----GFSVARVARLSQEALARELVSGTIAPLTMFKALRMREET  222 (245)
T ss_dssp             HHHHHHHHHHCCCGG---GEEEEESCHHHHHHHHHH-----TCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCT
T ss_pred             HHHHHHHHHhCCChh---hEEEEeCCHHHHHHHHHc-----CCeEEEEcCCCcccccccccccccccchhhhhhhhhhhh
Confidence            567888999999988   999999999998866666     54 56563210                         0  


Q ss_pred             -CccceEEeCChhHHHHHHHHH
Q 040896          258 -ETKALYSLRDPDEVMSFLRRL  278 (288)
Q Consensus       258 -~~~A~~~~~~~~~v~~~l~~~  278 (288)
                       ....++++++..++.+.|+.+
T Consensus       223 ~~~~pd~~i~~l~el~~lv~~~  244 (245)
T d1qq5a_         223 YAEAPDFVVPALGDLPRLVRGM  244 (245)
T ss_dssp             TSCCCSEEESSGGGHHHHHHHH
T ss_pred             ccCCCCEEECCHHHHHHHHHhh
Confidence             125789999999999988875

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=91.20  E-value=0.054  Score=40.38  Aligned_cols=44  Identities=18%  Similarity=0.400  Sum_probs=35.5

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEec
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSS  254 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~n  254 (288)
                      .+....+.+++.+|++++   +++++||+.+|+..-+.+     |+ +|.+.+
T Consensus       142 p~~~~~~~~~~~~~~~~~---~~l~vgDs~~di~~A~~a-----G~~ti~v~~  186 (197)
T d2b0ca1         142 PEARIYQHVLQAEGFSPS---DTVFFDDNADNIEGANQL-----GITSILVKD  186 (197)
T ss_dssp             TCHHHHHHHHHHHTCCGG---GEEEEESCHHHHHHHHTT-----TCEEEECCS
T ss_pred             cchHHHHHHHHhcCCCCC---eEEEEeCCHHHHHHHHHc-----CCEEEEECC
Confidence            567778999999999987   999999999998876666     64 565543

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.96  E-value=0.2  Score=37.03  Aligned_cols=44  Identities=16%  Similarity=0.136  Sum_probs=36.4

Q ss_pred             CCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEe
Q 040896          202 WDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVS  253 (288)
Q Consensus       202 ~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~  253 (288)
                      --|...+..+++.+|++++   ++++|||+..|+..-+.+     |. +|.|.
T Consensus        98 kp~~~~~~~~~~~~~~~~~---~~l~igD~~~di~aA~~a-----G~~~i~v~  142 (164)
T d1u7pa_          98 GSKVTHFERLHHKTGVPFS---QMVFFDDENRNIIDVGRL-----GVTCIHIR  142 (164)
T ss_dssp             SCHHHHHHHHHHHHCCCGG---GEEEEESCHHHHHHHHTT-----TCEEEECS
T ss_pred             CCChHHHHHHHHHhCCChH---HEEEEcCCHHHHHHHHHc-----CCEEEEEC
Confidence            3788899999999999988   999999999998876666     54 55554

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.78  E-value=0.021  Score=47.40  Aligned_cols=40  Identities=18%  Similarity=0.176  Sum_probs=30.4

Q ss_pred             CCCHHHHHHHHHHhcCC--CCCCCceeEEEcCCcccHHHHHHHHh
Q 040896          201 DWDKGRALEYLLDTFGF--NNASDFLPLYIGDDKTDEDAFKVIRH  243 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~--~~~~~~~vv~~GDs~ND~~Ml~~~~~  243 (288)
                      ..+|+..+.....++..  ..+   +++++|||.||+.|.+.+..
T Consensus       204 ~~~K~~~~~~~~~~~~~~~~~~---~vI~iGDs~~Dl~Ma~g~~~  245 (291)
T d2bdua1         204 VFNKHDGALKNTDYFSQLKDNS---NIILLGDSQGDLRMADGVAN  245 (291)
T ss_dssp             TTCHHHHHHTTHHHHHHTTTCC---EEEEEESSSGGGGTTTTCSC
T ss_pred             cccCcchhhhhHHHHhccCCcC---cEEEEeCCHhHHHHHhCCcc
Confidence            56899888776665433  233   99999999999999987654

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=90.74  E-value=0.066  Score=41.75  Aligned_cols=62  Identities=11%  Similarity=0.097  Sum_probs=44.7

Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEE---ecCCCC---ccceEEeCChhH
Q 040896          201 DWDKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIV---SSVPRE---TKALYSLRDPDE  270 (288)
Q Consensus       201 ~~sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v---~na~~~---~~A~~~~~~~~~  270 (288)
                      +--+....+..+++++++++   ++++|||+.+|+..=+.+     |+ +|.+   +|....   ..+..++++-++
T Consensus       183 ~KP~p~~~~~~~~~~~~~p~---~~l~vgD~~~dv~aA~~a-----G~~ti~v~r~g~~~~~~~~~~~~~~i~sl~E  251 (253)
T d1zs9a1         183 HKVESESYRKIADSIGCSTN---NILFLTDVTREASAAEEA-----DVHVAVVVRPGNAGLTDDEKTYYSLITSFSE  251 (253)
T ss_dssp             CTTCHHHHHHHHHHHTSCGG---GEEEEESCHHHHHHHHHT-----TCEEEEECCTTCCCCCHHHHHHSCEESSGGG
T ss_pred             cCCCcHHHHHHHHHhCCCcC---cEEEEeCCHHHHHHHHHc-----CCEEEEEeCCCCCCCchhhcCCCcEECChHH
Confidence            34667899999999999988   999999999999877777     65 5555   343221   345556666443

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=90.72  E-value=0.077  Score=42.14  Aligned_cols=15  Identities=27%  Similarity=0.324  Sum_probs=13.7

Q ss_pred             CcEEEEEecCCcccc
Q 040896           20 KKIVVFLDYDGTLSP   34 (288)
Q Consensus        20 ~~~li~~DlDGTL~~   34 (288)
                      +.|.|+||+||||++
T Consensus         1 kIkaviFD~dGTL~d   15 (257)
T d1swva_           1 KIEAVIFAWAGTTVD   15 (257)
T ss_dssp             CCCEEEECSBTTTBS
T ss_pred             CcEEEEEcCCCCeEe
Confidence            468999999999998

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=90.09  E-value=0.039  Score=42.63  Aligned_cols=14  Identities=29%  Similarity=0.164  Sum_probs=12.9

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .|+|+||+||||++
T Consensus         2 IKaIiFD~dGTL~d   15 (220)
T d1zrna_           2 IKGIAFDLYGTLFD   15 (220)
T ss_dssp             CCEEEECSBTTTEE
T ss_pred             CEEEEECCCCCcEe
Confidence            58999999999997

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=90.01  E-value=0.051  Score=42.44  Aligned_cols=17  Identities=35%  Similarity=0.684  Sum_probs=15.1

Q ss_pred             cCCcEEEEEecCCcccc
Q 040896           18 KGKKIVVFLDYDGTLSP   34 (288)
Q Consensus        18 ~~~~~li~~DlDGTL~~   34 (288)
                      .+..++|+||+||||++
T Consensus         4 ~~~i~~vlfD~dGTl~~   20 (253)
T d1zs9a1           4 PAEVTVILLDIEGTTTP   20 (253)
T ss_dssp             CTTCCEEEECCBTTTBC
T ss_pred             CCCCCEEEEeCcCCCcc
Confidence            46789999999999986

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=88.95  E-value=0.062  Score=42.12  Aligned_cols=14  Identities=36%  Similarity=0.256  Sum_probs=12.7

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .|.|+||+||||++
T Consensus         2 IKaviFD~dGTL~d   15 (245)
T d1qq5a_           2 IKAVVFDAYGTLFD   15 (245)
T ss_dssp             CCEEEECTBTTTBC
T ss_pred             CeEEEEeCCCCcEe
Confidence            47899999999997

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=88.89  E-value=0.064  Score=41.49  Aligned_cols=14  Identities=29%  Similarity=0.517  Sum_probs=12.3

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .|.|+||+||||++
T Consensus         2 ikaiiFD~DGTL~d   15 (221)
T d1o08a_           2 FKAVLFDLDGVITD   15 (221)
T ss_dssp             CCEEEECCBTTTBT
T ss_pred             CcEEEEcCCCCeEc
Confidence            36789999999997

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.79  E-value=0.048  Score=42.10  Aligned_cols=35  Identities=14%  Similarity=0.246  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHH
Q 040896          204 KGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVI  241 (288)
Q Consensus       204 Kg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~  241 (288)
                      .....+..+++++++++   ++++|||+..|+.+=+.+
T Consensus       159 ~p~~~~~~~~~~~v~p~---~~l~IgD~~~Di~~A~~a  193 (222)
T d1cr6a1         159 EPQIYNFLLDTLKAKPN---EVVFLDDFGSNLKPARDM  193 (222)
T ss_dssp             CHHHHHHHHHHHTSCTT---SEEEEESSSTTTHHHHHH
T ss_pred             ChHHHHHHHHHhCCCcc---eEEEEECCHHHHHHHHHc
Confidence            36778889999999988   999999999999988888

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=88.33  E-value=0.066  Score=39.88  Aligned_cols=12  Identities=8%  Similarity=0.279  Sum_probs=10.8

Q ss_pred             EEEEecCCcccc
Q 040896           23 VVFLDYDGTLSP   34 (288)
Q Consensus        23 li~~DlDGTL~~   34 (288)
                      |++||+||||++
T Consensus         2 l~iFDlDgtL~d   13 (197)
T d2b0ca1           2 LYIFDLGNVIVD   13 (197)
T ss_dssp             EEEECCBTTTEE
T ss_pred             EEEEeCCCCcCc
Confidence            677999999997

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.09  E-value=0.25  Score=37.66  Aligned_cols=13  Identities=38%  Similarity=0.503  Sum_probs=12.1

Q ss_pred             EEEEEecCCcccc
Q 040896           22 IVVFLDYDGTLSP   34 (288)
Q Consensus        22 ~li~~DlDGTL~~   34 (288)
                      |+++||+||||++
T Consensus         1 r~v~FDlDGtL~~   13 (222)
T d1cr6a1           1 RVAAFDLDGVLAL   13 (222)
T ss_dssp             CEEEECGGGTTEE
T ss_pred             CEEEEcCCCceEC
Confidence            6899999999997

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.30  E-value=0.4  Score=36.19  Aligned_cols=58  Identities=17%  Similarity=0.339  Sum_probs=43.0

Q ss_pred             CHHHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEecCCCCccceEEeCChhHHHHHHHHHHHH
Q 040896          203 DKGRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVSSVPRETKALYSLRDPDEVMSFLRRLARW  281 (288)
Q Consensus       203 sKg~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~na~~~~~A~~~~~~~~~v~~~l~~~~~~  281 (288)
                      -+....+.+++.+|++++   ++++|||+..|+.+-+.+     |+ +|.             +.+.....+-|+++.+.
T Consensus       160 P~~~~~~~~~~~~~~~p~---e~l~VgD~~~Di~~A~~~-----G~~ti~-------------v~~~~~~~~~l~~~~~~  218 (225)
T d1zd3a1         160 PEPQIYKFLLDTLKASPS---EVVFLDDIGANLKPARDL-----GMVTIL-------------VQDTDTALKELEKVTGI  218 (225)
T ss_dssp             TCHHHHHHHHHHHTCCGG---GEEEEESCHHHHHHHHHT-----TCEEEE-------------CSSHHHHHHHHHHHHTS
T ss_pred             hHHHHHHHHhhhcccCcc---ceeEEecCHHHHHHHHHc-----CCEEEE-------------ECCcchhHHHHHHccCc
Confidence            346889999999999987   999999999998877776     55 443             34555555666666543

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=86.83  E-value=0.1  Score=40.67  Aligned_cols=14  Identities=43%  Similarity=0.626  Sum_probs=12.6

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .|+|+||+||||++
T Consensus         2 iK~I~FD~dGTL~d   15 (230)
T d1x42a1           2 IRAVFFDFVGTLLS   15 (230)
T ss_dssp             CCEEEECSBTTTBC
T ss_pred             CeEEEEeCCCCcEe
Confidence            47899999999997

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.15  E-value=0.1  Score=39.78  Aligned_cols=14  Identities=29%  Similarity=0.396  Sum_probs=12.9

Q ss_pred             cEEEEEecCCcccc
Q 040896           21 KIVVFLDYDGTLSP   34 (288)
Q Consensus        21 ~~li~~DlDGTL~~   34 (288)
                      .|.|+||+||||++
T Consensus         2 Ik~vlFD~dGtL~~   15 (225)
T d1zd3a1           2 LRAAVFDLDGVLAL   15 (225)
T ss_dssp             CCEEEECTBTTTEE
T ss_pred             cEEEEEcCCCCeec
Confidence            58899999999997

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.86  E-value=0.12  Score=39.55  Aligned_cols=41  Identities=20%  Similarity=0.302  Sum_probs=33.6

Q ss_pred             HHHHHHHHHhcCCCCCCCceeEEEcCCcccHHHHHHHHhcCCce-EEEEe
Q 040896          205 GRALEYLLDTFGFNNASDFLPLYIGDDKTDEDAFKVIRHMGRGY-PIIVS  253 (288)
Q Consensus       205 g~al~~l~~~~~~~~~~~~~vv~~GDs~ND~~Ml~~~~~~~~g~-~v~v~  253 (288)
                      ...-+.+++++|++++   ++++|||+.+|+..=+.+     |+ +|.+.
T Consensus       162 p~~f~~~~~~lg~~p~---e~l~VgD~~~Dv~~A~~a-----G~~ti~v~  203 (225)
T d2g80a1         162 TQSYANILRDIGAKAS---EVLFLSDNPLELDAAAGV-----GIATGLAS  203 (225)
T ss_dssp             HHHHHHHHHHHTCCGG---GEEEEESCHHHHHHHHTT-----TCEEEEEC
T ss_pred             hhHhHHHHHhcccCch---hceeecCCHHHHHHHHHc-----CCEEEEEe
Confidence            6678899999999988   999999999997766666     54 66664