Citrus Sinensis ID: 040927

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
Protein Sequence
MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSDWMRCRRSI
Secondary Structure (PSIPRED)
cccccccEEEEEEcccccHHHHHHHHHHHHHcccccccEEEEccccHHHHHHHHHHHHHHcccccEEEEccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHcccccccEEEcccccccccccccHHHHHHHcHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccHHccEEEcccccccccHHHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHHcccccEEEEcHHHHHccccccHHHHHHHHHHHcHHHHHHHHHHHHHcccccccEEEEEccHHHHHccccHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mkrsnqvhysmgeattkdEKRGLAAVEKLknsgcdnvifhlldvtdpasvdSLVHFVssqfgkldilgglpdnwYKMLTQTYELAEKCIQtnyygnkrMCEALIpllqlsdsprivnasssmgklknitNEWAKGVLSDwmrcrrsi
Flexible Loop (DISEMBL)
mkrsnqvhysmgeattkdekrGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASssmgklknitnewakgvlsdwmrcrrsi
Low Complexity Region (SEG)
MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSDWMRCRRSI
Disordered region (IsUnstruct)
*************************VEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVN*****GKLKNITNEWAKGVLSDWMRC****
Disordered Region (DISOPRED)
*****QVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN*******GVLSDWMRCR***
Disordered Region (DISEMBL)
**********MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSDWMRCRRSI
Disordered Region (DISPRO)
*****QVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSDWM******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSDWMRCRRSI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	147	2.2.26 [Sep-21-2011]
Q9M2E2	296	(+)-neomenthol dehydrogen	yes	no	0.850	0.422	0.560	6e-40
Q9ZUH5	296	Short-chain dehydrogenase	no	no	0.850	0.422	0.547	4e-39
A4UHT7	311	Salutaridine reductase OS	N/A	no	0.850	0.401	0.468	2e-29
B2X050	314	(+)-neomenthol dehydrogen	N/A	no	0.850	0.398	0.430	3e-29
Q6WAU1	314	(-)-isopiperitenone reduc	N/A	no	0.870	0.407	0.417	5e-22
Q8K354	277	Carbonyl reductase [NADPH	no	no	0.836	0.444	0.328	1e-10
P48758	277	Carbonyl reductase [NADPH	no	no	0.748	0.397	0.350	1e-10
Q5RCU5	277	Carbonyl reductase [NADPH	yes	no	0.714	0.379	0.345	9e-10
P16152	277	Carbonyl reductase [NADPH	yes	no	0.714	0.379	0.345	1e-09
Q3SZD7	277	Carbonyl reductase [NADPH	no	no	0.632	0.335	0.343	2e-09

>sp|Q9M2E2|SDR1_ARATH (+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1

 Score =  162 bits (411), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 83/148 (56%), Positives = 102/148 (68%), Gaps = 23/148 (15%)

Query: 15  TTKDEKRGLAAVEKLKNS---GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---- 67
           T++DE RGL AVE LK        +++FH LDV DPAS+ SL  FV +QFGKLDIL    
Sbjct: 36  TSRDENRGLEAVETLKKELEISDQSLLFHQLDVADPASITSLAEFVKTQFGKLDILVNNA 95

Query: 68  --GGLPDN--------------WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD 111
             GG+  +              W +++T+TYEL E+CI+ NYYG KRMCEA IPLL+LSD
Sbjct: 96  GIGGIITDAEALRAGAGKEGFKWDEIITETYELTEECIKINYYGPKRMCEAFIPLLKLSD 155

Query: 112 SPRIVNASSSMGKLKNITNEWAKGVLSD 139
           SPRIVN SSSMG+LKN+ NEWAKG+LSD
Sbjct: 156 SPRIVNVSSSMGQLKNVLNEWAKGILSD 183

Involved in basal resistance against pathogens.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 0EC: 8

>sp|Q9ZUH5|SDR2B_ARATH Short-chain dehydrogenase/reductase 2b OS=Arabidopsis thaliana GN=SDR2b PE=1 SV=1

 Score =  159 bits (403), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 81/148 (54%), Positives = 101/148 (68%), Gaps = 23/148 (15%)

Query: 15  TTKDEKRGLAAVEKLKNS---GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---- 67
           T++DEK+GL AVE LK        +++FH LDV+DP SV SL  FV + FGKLDIL    
Sbjct: 36  TSRDEKQGLEAVETLKKELEISDQSIVFHQLDVSDPVSVTSLAEFVKTHFGKLDILINNA 95

Query: 68  --GGLPDN--------------WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD 111
             GG+  +              W + +T+TYELAE+CI+ NYYG KRMCEA IPLLQLSD
Sbjct: 96  GVGGVITDVDALRAGTGKEGFKWEETITETYELAEECIKINYYGPKRMCEAFIPLLQLSD 155

Query: 112 SPRIVNASSSMGKLKNITNEWAKGVLSD 139
           SPRI+N SS MG++KN+ NEWAKG+LSD
Sbjct: 156 SPRIINVSSFMGQVKNLVNEWAKGILSD 183

Arabidopsis thaliana (taxid: 3702)

>sp|A4UHT7|SALR_PAPBR Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1

 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 95/158 (60%), Gaps = 33/158 (20%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP-ASVDSLVHFVSSQFGKLDIL---GGL 70
           T +D  RGL AVEKLKNS  +NV+FH LDVTDP  ++ SL  F+ ++FGKLDIL    G+
Sbjct: 42  TCRDVTRGLEAVEKLKNSNHENVVFHQLDVTDPITTMSSLADFIKARFGKLDILVNNAGV 101

Query: 71  P------DNWYKM-----------------------LTQTYELAEKCIQTNYYGNKRMCE 101
                  D +  M                       +++TYELAE+C++ NYYG K + E
Sbjct: 102 AGFSVDADRFKAMISDIGEDSEEVVKIYEKPEAQELMSETYELAEECLKINYYGVKSVTE 161

Query: 102 ALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSD 139
            L+PLLQLSDSPRIVN SSS G LK ++NE A  +L D
Sbjct: 162 VLLPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGD 199

Involved in biosynthesis of morphinan-type benzylisoquinoline alkaloids. Catalyzes the stereospecific conversion of salutaridine to salutaridinol.

Papaver bracteatum (taxid: 215227)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 4

EC: 8

>sp|B2X050|MNR1_CAPAN (+)-neomenthol dehydrogenase OS=Capsicum annuum GN=MNR1 PE=1 SV=1

 Score =  127 bits (319), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 95/165 (57%), Gaps = 40/165 (24%)

Query: 15  TTKDEKRGLAAVEKLK---NSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---- 67
           T++DEK+G+ A+E+LK   N   ++++FH LD+ DPAS+ SLV+ + ++FG+LDIL    
Sbjct: 38  TSRDEKKGIEAIERLKEESNFTDEHILFHQLDIMDPASISSLVNLIKTKFGRLDILINNA 97

Query: 68  ------------------------------GGLPDNWYKM---LTQTYELAEKCIQTNYY 94
                                          G    W K        YEL ++CI+TNYY
Sbjct: 98  GISGVMVEGDVQVLKEILERYISIVFTEDENGEEGGWTKSGPGSVTNYELTKECIETNYY 157

Query: 95  GNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSD 139
           G KRM EA IPLLQLS+SPRIVN +SSMGKLK + N+WA  VL D
Sbjct: 158 GAKRMTEAFIPLLQLSNSPRIVNVASSMGKLKLLCNKWAIEVLRD 202

Involved in basal resistance against pathogens.

Capsicum annuum (taxid: 4072)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 8

>sp|Q6WAU1|IPIPR_MENPI (-)-isopiperitenone reductase OS=Mentha piperita PE=1 SV=1

 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 92/170 (54%), Gaps = 42/170 (24%)

Query: 15  TTKDEKRGLAAVEKLK---NSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---- 67
           T+++EKRGL A +KL    N   + ++FH LDVTD ASV ++  F+ S+FGKLDIL    
Sbjct: 35  TSRNEKRGLEARQKLLKELNVSENRLVFHQLDVTDLASVAAVAVFIKSKFGKLDILVNNA 94

Query: 68  ------------------------------GGLPDNWYKM-----LTQTYELAEKCIQTN 92
                                         G   +  +K      + + +E A+ C+ TN
Sbjct: 95  GVSGVEMVGDVSVFNEYIEADFKALQALEAGAKEEPPFKPKANGEMIEKFEGAKDCVVTN 154

Query: 93  YYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSDWMR 142
           YYG KR+ +ALIPLLQLS SPRIVN SSS G L  + NEWAKGVL D  R
Sbjct: 155 YYGPKRLTQALIPLLQLSPSPRIVNVSSSFGSLLLLWNEWAKGVLGDEDR 204

Monoterpene synthase that catalyzes the specific reduction of the 1(2)-double bond of (-)-isopiperitenone to produce (+)-cis-isopulegone. Does not catalyze the reverse reaction. Unable to reduce (+)-pulegone, (+)-cis-isopulegone, (-)-menthone or the 1,2-double bond of (-)-carvone. Able to utilize NADH with 20% the efficiency of NADPH.

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|Q8K354|CBR3_MOUSE Carbonyl reductase [NADPH] 3 OS=Mus musculus GN=Cbr3 PE=2 SV=1

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 8/131 (6%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
           T +DE RG AAV++L+  G  +  FH LD+ DP S+ +L  F+  ++G L++L       
Sbjct: 36  TARDEARGRAAVQQLQAEGL-SPRFHQLDIDDPQSIRALRDFLRKEYGGLNVLVNNAGIA 94

Query: 75  YKMLTQT-YEL-AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEW 132
           ++M   T +++ AE  ++TN++  + +C  L+P+++     R+VN SS  G LK + N  
Sbjct: 95  FRMDDPTPFDIQAEVTLKTNFFATRNVCTELLPIMK--PHGRVVNISSLQG-LKALEN-- 149

Query: 133 AKGVLSDWMRC 143
            +  L +  RC
Sbjct: 150 CREDLQEKFRC 160

Has low NADPH-dependent oxidoreductase activity towards 4-benzoylpyridine and menadione (in vitro).

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|P48758|CBR1_MOUSE Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 69/117 (58%), Gaps = 7/117 (5%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
             +DE+RG  AV+KL+  G  +  FH LD+ +P S+ +L  F+  ++G LD+L       
Sbjct: 36  AARDEERGQTAVQKLQAEGL-SPRFHQLDIDNPQSIRALRDFLLKEYGGLDVLVNNAGIA 94

Query: 75  YKMLTQT--YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS--SMGKLKN 127
           +K+   T  +  AE  ++TN++G + +C+ L+PL++     R+VN SS  S+  LKN
Sbjct: 95  FKVNDDTPFHIQAEVTMKTNFFGTRDVCKELLPLIKPQG--RVVNVSSMVSLRALKN 149

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q5RCU5|CBR1_PONAB Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3

 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 5/110 (4%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
           T +D  RG AAV++L+  G  +  FH LD+ D  S+ +L  F+  ++G LD+L       
Sbjct: 36  TARDVARGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA 94

Query: 75  YKMLTQT--YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
           +K+   T  +  AE  ++TN++G + +C  L+PL++     R+VN SS M
Sbjct: 95  FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQG--RVVNVSSIM 142

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|P16152|CBR1_HUMAN Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 5/110 (4%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
           T +D  RG AAV++L+  G  +  FH LD+ D  S+ +L  F+  ++G LD+L       
Sbjct: 36  TARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA 94

Query: 75  YKMLTQT--YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
           +K+   T  +  AE  ++TN++G + +C  L+PL++     R+VN SS M
Sbjct: 95  FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQG--RVVNVSSIM 142

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q3SZD7|CBR1_BOVIN Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1 PE=2 SV=1

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 3/96 (3%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
           T +DE RG AAV++L+  G  + +FH LD+ D  S+ +L  F+  ++G LD+L       
Sbjct: 36  TARDEARGRAAVQQLQAEGL-SPLFHQLDIDDRQSIRALRDFLRKEYGGLDVLVNNAGIA 94

Query: 75  YKMLTQT--YELAEKCIQTNYYGNKRMCEALIPLLQ 108
           +K    T  +  AE  ++TN++G + +C  L+PL++
Sbjct: 95  FKTADTTPFHIQAEVTMKTNFFGTRDVCTELLPLIK 130

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
359489616	297	PREDICTED: (+)-neomenthol dehydrogenase-	0.850	0.420	0.56	4e-39
225454097	297	PREDICTED: (+)-neomenthol dehydrogenase	0.850	0.420	0.56	5e-39
297745216	298	unnamed protein product [Vitis vinifera]	0.850	0.419	0.562	7e-39
359489600	539	PREDICTED: (+)-neomenthol dehydrogenase	0.850	0.231	0.562	8e-39
15233062	296	(+)-neomenthol dehydrogenase [Arabidopsi	0.850	0.422	0.560	4e-38
297745219	302	unnamed protein product [Vitis vinifera]	0.850	0.413	0.533	5e-38
334186180	303	(+)-neomenthol dehydrogenase [Arabidopsi	0.850	0.412	0.560	5e-38
224064013	296	predicted protein [Populus trichocarpa]	0.850	0.422	0.570	1e-37
255541520	544	carbonyl reductase, putative [Ricinus co	0.850	0.229	0.563	2e-37
297817432	296	short-chain dehydrogenase/reductase fami	0.850	0.422	0.567	2e-37

>gi|359489616|ref|XP_002267348.2| PREDICTED: (+)-neomenthol dehydrogenase-like [Vitis vinifera] gi|297745217|emb|CBI40297.3| unnamed protein product [Vitis vinifera]

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 84/150 (56%), Positives = 101/150 (67%), Gaps = 25/150 (16%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL------G 68
           T +DEKRGL A+E LK SG  N++FH LDV DPAS+ S+  F+ +QFGKLDIL      G
Sbjct: 36  TARDEKRGLEALESLKGSGLSNLVFHQLDVGDPASISSIADFIKAQFGKLDILVNNAGIG 95

Query: 69  GL----PD---------------NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQL 109
           G     PD               NW +++ + +EL E+C++ NYYG KRM EA IPLLQL
Sbjct: 96  GTVVTDPDALRSRIASAEAVGKVNWKEIMIEPFELVEECLKINYYGPKRMIEAFIPLLQL 155

Query: 110 SDSPRIVNASSSMGKLKNITNEWAKGVLSD 139
           SDSPRIVN SSSMGKL+NI NEWAK VLSD
Sbjct: 156 SDSPRIVNVSSSMGKLQNIKNEWAKAVLSD 185

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454097|ref|XP_002267820.1| PREDICTED: (+)-neomenthol dehydrogenase [Vitis vinifera] gi|297745218|emb|CBI40298.3| unnamed protein product [Vitis vinifera]

 Score =  165 bits (418), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 84/150 (56%), Positives = 101/150 (67%), Gaps = 25/150 (16%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL------G 68
           T +DEKRGL A+E LK SG  N++FH LDV DPAS+ S+  F+ +QFGKLDIL      G
Sbjct: 36  TARDEKRGLEALESLKGSGLSNLVFHQLDVGDPASISSIADFIKAQFGKLDILVNNAGIG 95

Query: 69  GL----PD---------------NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQL 109
           G     PD               NW +++ + +EL E+C++ NYYG KRM EA IPLLQL
Sbjct: 96  GTVVTDPDALRSRYASAEAVGKVNWKEIMIEPFELVEECLKINYYGPKRMIEAFIPLLQL 155

Query: 110 SDSPRIVNASSSMGKLKNITNEWAKGVLSD 139
           SDSPRIVN SSSMGKL+NI NEWAK VLSD
Sbjct: 156 SDSPRIVNVSSSMGKLQNIKNEWAKAVLSD 185

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745216|emb|CBI40296.3| unnamed protein product [Vitis vinifera]

 Score =  165 bits (417), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 85/151 (56%), Positives = 103/151 (68%), Gaps = 26/151 (17%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL------- 67
           T +DEKRG+ A+E LK SG  NV+FH LDV DPAS+ SL  F+ +QFGKLDIL       
Sbjct: 36  TARDEKRGVEALESLKGSGLSNVVFHQLDVGDPASIASLADFIKTQFGKLDILVNNAGII 95

Query: 68  GGL---PD----------------NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQ 108
           G L   PD                NW +++ + +ELAE+C++ NYYG KRM E LIPLL+
Sbjct: 96  GTLVTDPDGFRLGIPAARAKVGKINWKEIMIEPFELAEECMKINYYGPKRMSEVLIPLLR 155

Query: 109 LSDSPRIVNASSSMGKLKNITNEWAKGVLSD 139
           LSDSPRIVN SSSMG+L+NI NEWAKGVLSD
Sbjct: 156 LSDSPRIVNVSSSMGRLQNIKNEWAKGVLSD 186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489600|ref|XP_002267232.2| PREDICTED: (+)-neomenthol dehydrogenase [Vitis vinifera]

 Score =  164 bits (416), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 85/151 (56%), Positives = 103/151 (68%), Gaps = 26/151 (17%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL------- 67
           T +DEKRG+ A+E LK SG  NV+FH LDV DPAS+ SL  F+ +QFGKLDIL       
Sbjct: 277 TARDEKRGVEALESLKGSGLSNVVFHQLDVGDPASIASLADFIKTQFGKLDILVNNAGII 336

Query: 68  GGL---PD----------------NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQ 108
           G L   PD                NW +++ + +ELAE+C++ NYYG KRM E LIPLL+
Sbjct: 337 GTLVTDPDGFRLGIPAARAKVGKINWKEIMIEPFELAEECMKINYYGPKRMSEVLIPLLR 396

Query: 109 LSDSPRIVNASSSMGKLKNITNEWAKGVLSD 139
           LSDSPRIVN SSSMG+L+NI NEWAKGVLSD
Sbjct: 397 LSDSPRIVNVSSSMGRLQNIKNEWAKGVLSD 427

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15233062|ref|NP_191681.1| (+)-neomenthol dehydrogenase [Arabidopsis thaliana] gi|75311801|sp|Q9M2E2.1|SDR1_ARATH RecName: Full=(+)-neomenthol dehydrogenase; AltName: Full=Menthone:neomenthol reductase; AltName: Full=Short-chain dehydrogenase/reductase 1; Short=AtSDR1 gi|6850889|emb|CAB71052.1| putative protein [Arabidopsis thaliana] gi|15028055|gb|AAK76558.1| unknown protein [Arabidopsis thaliana] gi|20259057|gb|AAM14244.1| unknown protein [Arabidopsis thaliana] gi|332646653|gb|AEE80174.1| (+)-neomenthol dehydrogenase [Arabidopsis thaliana]

 Score =  162 bits (411), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 83/148 (56%), Positives = 102/148 (68%), Gaps = 23/148 (15%)

Query: 15  TTKDEKRGLAAVEKLKNS---GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---- 67
           T++DE RGL AVE LK        +++FH LDV DPAS+ SL  FV +QFGKLDIL    
Sbjct: 36  TSRDENRGLEAVETLKKELEISDQSLLFHQLDVADPASITSLAEFVKTQFGKLDILVNNA 95

Query: 68  --GGLPDN--------------WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD 111
             GG+  +              W +++T+TYEL E+CI+ NYYG KRMCEA IPLL+LSD
Sbjct: 96  GIGGIITDAEALRAGAGKEGFKWDEIITETYELTEECIKINYYGPKRMCEAFIPLLKLSD 155

Query: 112 SPRIVNASSSMGKLKNITNEWAKGVLSD 139
           SPRIVN SSSMG+LKN+ NEWAKG+LSD
Sbjct: 156 SPRIVNVSSSMGQLKNVLNEWAKGILSD 183

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745219|emb|CBI40299.3| unnamed protein product [Vitis vinifera]

 Score =  162 bits (409), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 80/150 (53%), Positives = 99/150 (66%), Gaps = 25/150 (16%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP 71
           T +DEKRG+ A++ L  SG  N++FH LDV DPAS+ S   F+ +QFGKLDIL    G+ 
Sbjct: 41  TARDEKRGVEALQSLNGSGLSNLVFHQLDVGDPASIASFADFIKTQFGKLDILVNNAGMS 100

Query: 72  D----------------------NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQL 109
                                  NW+ ++TQ  ELAE+C++ NYYG KRM EA IPLLQL
Sbjct: 101 GSIVKDPVALESGVAATEIREQVNWHGIMTQPLELAEECVKINYYGPKRMAEAFIPLLQL 160

Query: 110 SDSPRIVNASSSMGKLKNITNEWAKGVLSD 139
           SDSPRIVN SSS+GKL+N+TNEWAK VLSD
Sbjct: 161 SDSPRIVNVSSSLGKLQNVTNEWAKAVLSD 190

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334186180|ref|NP_001190151.1| (+)-neomenthol dehydrogenase [Arabidopsis thaliana] gi|332646654|gb|AEE80175.1| (+)-neomenthol dehydrogenase [Arabidopsis thaliana]

 Score =  162 bits (409), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 83/148 (56%), Positives = 102/148 (68%), Gaps = 23/148 (15%)

Query: 15  TTKDEKRGLAAVEKLKNS---GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---- 67
           T++DE RGL AVE LK        +++FH LDV DPAS+ SL  FV +QFGKLDIL    
Sbjct: 43  TSRDENRGLEAVETLKKELEISDQSLLFHQLDVADPASITSLAEFVKTQFGKLDILVNNA 102

Query: 68  --GGLPDN--------------WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD 111
             GG+  +              W +++T+TYEL E+CI+ NYYG KRMCEA IPLL+LSD
Sbjct: 103 GIGGIITDAEALRAGAGKEGFKWDEIITETYELTEECIKINYYGPKRMCEAFIPLLKLSD 162

Query: 112 SPRIVNASSSMGKLKNITNEWAKGVLSD 139
           SPRIVN SSSMG+LKN+ NEWAKG+LSD
Sbjct: 163 SPRIVNVSSSMGQLKNVLNEWAKGILSD 190

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224064013|ref|XP_002301348.1| predicted protein [Populus trichocarpa] gi|222843074|gb|EEE80621.1| predicted protein [Populus trichocarpa]

 Score =  160 bits (406), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/149 (57%), Positives = 102/149 (68%), Gaps = 24/149 (16%)

Query: 15  TTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL------ 67
           T+++EKRGL +V+KLK SG  D V+FH LDV D  S+ SL  F+ SQFGKLDIL      
Sbjct: 36  TSRNEKRGLESVQKLKESGLSDFVVFHQLDVADINSIASLADFIKSQFGKLDILVNNAGV 95

Query: 68  GGLPD-----------------NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS 110
           GG+                   NW + +TQT+ELAE+C++ NYYG KRM EALIPLLQLS
Sbjct: 96  GGVKTDGDALKAAISGKEGAKINWSEFITQTWELAEECLRINYYGAKRMAEALIPLLQLS 155

Query: 111 DSPRIVNASSSMGKLKNITNEWAKGVLSD 139
           DSPRIVN SSSMG LK ++NEWAKGVL D
Sbjct: 156 DSPRIVNVSSSMGNLKGVSNEWAKGVLGD 184

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541520|ref|XP_002511824.1| carbonyl reductase, putative [Ricinus communis] gi|223549004|gb|EEF50493.1| carbonyl reductase, putative [Ricinus communis]

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 84/149 (56%), Positives = 101/149 (67%), Gaps = 24/149 (16%)

Query: 15  TTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL------ 67
           T +DE+RGL AV+KLK+SG  D V+FH LDV + A++  L  F+ +QFGKLDIL      
Sbjct: 284 TARDERRGLEAVQKLKDSGLSDYVVFHQLDVANTATIAVLADFIKAQFGKLDILVNNAGI 343

Query: 68  GGLPDN-----------------WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS 110
           GG+  +                 W ++LT+TYELAE CI  NYYG KRM EAL PLLQLS
Sbjct: 344 GGVEADDDALRASFSSNEGAQFGWLELLTETYELAEACITVNYYGAKRMVEALFPLLQLS 403

Query: 111 DSPRIVNASSSMGKLKNITNEWAKGVLSD 139
           DSPRIVN SSSMGKLKN++NEWA  VLSD
Sbjct: 404 DSPRIVNVSSSMGKLKNVSNEWATQVLSD 432

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817432|ref|XP_002876599.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297322437|gb|EFH52858.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 84/148 (56%), Positives = 102/148 (68%), Gaps = 23/148 (15%)

Query: 15  TTKDEKRGLAAVEKLKNS---GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---- 67
           T++DEKRGL AVE LK        +++FH LDV+DPAS  SL  FV + FGKLDIL    
Sbjct: 36  TSRDEKRGLEAVETLKKELQISDQSLVFHQLDVSDPASSTSLAEFVKTLFGKLDILVNNA 95

Query: 68  --GGLPDN--------------WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD 111
             GG+  +              W +++T+TYELAE+CI+ NYYG KRMCEA IPLL+LSD
Sbjct: 96  GVGGIITDADALRAGAGKEGFKWDEIITETYELAEECIKINYYGPKRMCEAFIPLLKLSD 155

Query: 112 SPRIVNASSSMGKLKNITNEWAKGVLSD 139
           SPRIVN SSSMG LKN+ NEWAKG+LSD
Sbjct: 156 SPRIVNVSSSMGLLKNVLNEWAKGILSD 183

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
TAIR|locus:2198230	295	AT1G01800 [Arabidopsis thalian	0.482	0.240	0.661	9.2e-36
UNIPROTKB|Q6WAU1	314	Q6WAU1 "(-)-isopiperitenone re	0.421	0.197	0.629	1.5e-27
TAIR|locus:2159188	316	AT5G61830 [Arabidopsis thalian	0.925	0.430	0.368	2.2e-13
TAIR|locus:2157408	314	AT5G51030 [Arabidopsis thalian	0.843	0.394	0.328	3.7e-13
UNIPROTKB|G1K231	277	LOC100335345 "Uncharacterized	0.775	0.411	0.347	2.2e-12
UNIPROTKB|Q3SZD7	277	CBR1 "Carbonyl reductase [NADP	0.775	0.411	0.347	2.2e-12
ZFIN|ZDB-GENE-030131-9642	277	cbr1l "carbonyl reductase 1-li	0.734	0.389	0.357	2.2e-12
MGI|MGI:1309992	277	Cbr3 "carbonyl reductase 3" [M	0.836	0.444	0.328	3.8e-12
MGI|MGI:88284	277	Cbr1 "carbonyl reductase 1" [M	0.734	0.389	0.356	5e-12
ZFIN|ZDB-GENE-030902-2	276	cbr1 "carbonyl reductase 1" [D	0.734	0.391	0.336	8.4e-12

TAIR|locus:2198230 AT1G01800 [Arabidopsis thaliana (taxid:3702)]

 Score = 265 (98.3 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
 Identities = 47/71 (66%), Positives = 62/71 (87%)

Query:    69 GLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
             G P +  K+++ TYE+ E+C++TNYYG KRMCEA+IPLLQ SDSPRIV+ +S+MGKL+N+
Sbjct:   113 GAPTDISKIMSDTYEIVEECVKTNYYGVKRMCEAMIPLLQSSDSPRIVSIASTMGKLENV 172

Query:   129 TNEWAKGVLSD 139
             +NEWAKGVLSD
Sbjct:   173 SNEWAKGVLSD 183

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

UNIPROTKB|Q6WAU1 Q6WAU1 "(-)-isopiperitenone reductase" [Mentha x piperita (taxid:34256)]

 Score = 199 (75.1 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
 Identities = 39/62 (62%), Positives = 47/62 (75%)

Query:    78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVL 137
             + + +E A+ C+ TNYYG KR+ +ALIPLLQLS SPRIVN SSS G L  + NEWAKGVL
Sbjct:   140 MIEKFEGAKDCVVTNYYGPKRLTQALIPLLQLSPSPRIVNVSSSFGSLLLLWNEWAKGVL 199

Query:   138 SD 139
              D
Sbjct:   200 GD 201

GO:0031525 "menthol biosynthetic process" evidence=IDA

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052581 "(-)-isopiperitenone reductase activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

TAIR|locus:2159188 AT5G61830 [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 2.2e-13, P = 2.2e-13
 Identities = 52/141 (36%), Positives = 70/141 (49%)

Query:     3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNS--GCDNVIFHLLDVTDPASVDSLVHFVSSQ 60
             R   VH      T ++   GL AV+ L++   G   V FH LDVTD +S+     ++   
Sbjct:    54 RQLAVHGLTVVLTARNVNAGLEAVKSLRHQEEGL-KVYFHQLDVTDSSSIREFGCWLKQT 112

Query:    61 FGKLDIL-GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNA 118
             FG LDIL      N+      T E AE  I TNY G K M +A+IPL++ S    R+VN 
Sbjct:   113 FGGLDILVNNAGVNYNLGSDNTVEFAETVISTNYQGTKNMTKAMIPLMRPSPHGARVVNV 172

Query:   119 SSSMGKLKNITNEWAKGVLSD 139
             SS +G++    N  A   L D
Sbjct:   173 SSRLGRVNGRRNRLANVELRD 193

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2157408 AT5G51030 [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 3.7e-13, P = 3.7e-13
 Identities = 43/131 (32%), Positives = 70/131 (53%)

Query:    15 TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-GGLPDN 73
             T++DE  G+ A + L+  G  NV FH LD+ D +S+     ++  ++G +D+L      N
Sbjct:    67 TSRDENVGVEAAKILQEGGF-NVDFHRLDILDSSSIQEFCEWIKEKYGFIDVLINNAGVN 125

Query:    74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMGKLKN----I 128
             +      + E +   I TNYYG K +  A+IPL++ +    RIVN +S +G+LK     +
Sbjct:   126 YNVGSDNSVEFSHMVISTNYYGTKNIINAMIPLMRHACQGARIVNVTSRLGRLKGRHSKL 185

Query:   129 TNEWAKGVLSD 139
              NE  +  L D
Sbjct:   186 ENEDVRAKLMD 196

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|G1K231 LOC100335345 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 167 (63.8 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 42/121 (34%), Positives = 70/121 (57%)

Query:    15 TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
             T +DE RG AAV++L+  G  + +FH LD+ D  S+ +L  F+  ++G LD+L       
Sbjct:    36 TARDEARGRAAVQQLQAEGL-SPLFHQLDIDDRQSIRALRDFLRKEYGGLDVLVNNAGIA 94

Query:    75 YKMLTQT-YEL-AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS--SMGKLKNITN 130
             +K    T + + AE  ++TN++G + +C  L+PL++     R+VN SS  S+  LK  + 
Sbjct:    95 FKTADTTPFHIQAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSFVSVNSLKKCSR 152

Query:   131 E 131
             E
Sbjct:   153 E 153

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q3SZD7 CBR1 "Carbonyl reductase [NADPH] 1" [Bos taurus (taxid:9913)]

 Score = 167 (63.8 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 42/121 (34%), Positives = 70/121 (57%)

Query:    15 TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
             T +DE RG AAV++L+  G  + +FH LD+ D  S+ +L  F+  ++G LD+L       
Sbjct:    36 TARDEARGRAAVQQLQAEGL-SPLFHQLDIDDRQSIRALRDFLRKEYGGLDVLVNNAGIA 94

Query:    75 YKMLTQT-YEL-AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS--SMGKLKNITN 130
             +K    T + + AE  ++TN++G + +C  L+PL++     R+VN SS  S+  LK  + 
Sbjct:    95 FKTADTTPFHIQAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSFVSVNSLKKCSR 152

Query:   131 E 131
             E
Sbjct:   153 E 153

GO:0042373 "vitamin K metabolic process" evidence=ISS

GO:0017144 "drug metabolic process" evidence=ISS

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-030131-9642 cbr1l "carbonyl reductase 1-like" [Danio rerio (taxid:7955)]

 Score = 167 (63.8 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 40/112 (35%), Positives = 64/112 (57%)

Query:    15 TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
             T ++EK G  A+  L++ G  NV+FH LD+ D  S   L  F+  ++G LD+L       
Sbjct:    35 TARNEKLGQEAIAGLQSEGFKNVVFHQLDICDQGSCMKLKKFLEEKYGGLDVLINNAGIA 94

Query:    75 YK-MLTQTY-ELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
             +K   T+ + E AE  ++TN++G    C AL+P+L+ +   R+VN SS + K
Sbjct:    95 FKNAATEPFGEQAEVTMRTNFWGTLWACHALLPILRAN--ARVVNVSSFVSK 144

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

MGI|MGI:1309992 Cbr3 "carbonyl reductase 3" [Mus musculus (taxid:10090)]

 Score = 165 (63.1 bits), Expect = 3.8e-12, P = 3.8e-12
 Identities = 43/131 (32%), Positives = 75/131 (57%)

Query:    15 TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
             T +DE RG AAV++L+  G  +  FH LD+ DP S+ +L  F+  ++G L++L       
Sbjct:    36 TARDEARGRAAVQQLQAEGL-SPRFHQLDIDDPQSIRALRDFLRKEYGGLNVLVNNAGIA 94

Query:    75 YKMLTQT-YEL-AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEW 132
             ++M   T +++ AE  ++TN++  + +C  L+P+++     R+VN SS  G LK + N  
Sbjct:    95 FRMDDPTPFDIQAEVTLKTNFFATRNVCTELLPIMK--PHGRVVNISSLQG-LKALEN-- 149

Query:   133 AKGVLSDWMRC 143
              +  L +  RC
Sbjct:   150 CREDLQEKFRC 160

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000253 "3-keto sterol reductase activity" evidence=ISO

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0042376 "phylloquinone catabolic process" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

GO:0070402 "NADPH binding" evidence=ISO

MGI|MGI:88284 Cbr1 "carbonyl reductase 1" [Mus musculus (taxid:10090)]

 Score = 164 (62.8 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 41/115 (35%), Positives = 70/115 (60%)

Query:    17 KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYK 76
             +DE+RG  AV+KL+  G  +  FH LD+ +P S+ +L  F+  ++G LD+L       +K
Sbjct:    38 RDEERGQTAVQKLQAEGL-SPRFHQLDIDNPQSIRALRDFLLKEYGGLDVLVNNAGIAFK 96

Query:    77 MLTQT-YEL-AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS--SMGKLKN 127
             +   T + + AE  ++TN++G + +C+ L+PL++     R+VN SS  S+  LKN
Sbjct:    97 VNDDTPFHIQAEVTMKTNFFGTRDVCKELLPLIK--PQGRVVNVSSMVSLRALKN 149

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO;TAS

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0005902 "microvillus" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=ISO

GO:0017144 "drug metabolic process" evidence=ISO

GO:0042373 "vitamin K metabolic process" evidence=ISO

GO:0042376 "phylloquinone catabolic process" evidence=ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=ISO;TAS

ZFIN|ZDB-GENE-030902-2 cbr1 "carbonyl reductase 1" [Danio rerio (taxid:7955)]

 Score = 162 (62.1 bits), Expect = 8.4e-12, P = 8.4e-12
 Identities = 38/113 (33%), Positives = 62/113 (54%)

Query:    15 TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
             +++D  RG AAV+ LK  G  + +FH LD+ DP SV +   F   ++G LD+L       
Sbjct:    35 SSRDVGRGTAAVDSLKKEGL-HPLFHQLDINDPNSVRTARDFFQEKYGGLDVLINNAGIA 93

Query:    75 YKMLTQTY--ELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
             +KM   T     A+  ++TN++  + MC   +P+++     R+VN SS MG +
Sbjct:    94 FKMADTTPFGTQADVTLKTNFFATRDMCNVFLPIIK--PGGRLVNVSSGMGSM 144

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	147
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	6e-37
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	3e-15
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-14
cd05233	234	cd05233, SDR_c, classical (c) SDRs	3e-14
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	5e-12
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	5e-10
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	3e-09
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	4e-09
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	3e-08
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	3e-08
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-08
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	7e-08
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	8e-08
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-08
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	9e-08
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	4e-07
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	6e-07
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	6e-07
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	8e-07
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	9e-07
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-06
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-06
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-06
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-06
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	3e-06
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	5e-06
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	5e-06
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	6e-06
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	7e-06
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	9e-06
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-05
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	4e-05
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	4e-05
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	4e-05
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	5e-05
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	5e-05
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	6e-05
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	6e-05
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	7e-05
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	8e-05
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	8e-05
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	8e-05
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-04
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-04
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	1e-04
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-04
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-04
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-04
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-04
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-04
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-04
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	4e-04
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	4e-04
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	4e-04
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	4e-04
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	4e-04
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	5e-04
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	7e-04
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	7e-04
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	8e-04
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	8e-04
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	8e-04
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	0.001
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	0.001
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	0.002
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	0.002
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	0.002
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	0.003
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	0.003
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	0.003
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	0.003
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	0.003
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	0.003
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	0.003
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	0.003
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	0.003
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	0.004
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	0.004
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	0.004

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  125 bits (316), Expect = 6e-37
 Identities = 51/129 (39%), Positives = 75/129 (58%), Gaps = 9/129 (6%)

Query: 3   RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG 62
           +S      +   T +D +RG AAVEKL+  G  +V FH LDVTD AS+++   FV  ++G
Sbjct: 22  KSGPGTVIL---TARDVERGQAAVEKLRAEGL-SVRFHQLDVTDDASIEAAADFVEEKYG 77

Query: 63  KLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNA 118
            LDIL    G      +   T T E A + ++TN++G   + +AL+PLL+ S + RIVN 
Sbjct: 78  GLDILVNNAGIAFKG-FDDSTPTREQARETMKTNFFGTVDVTQALLPLLKKSPAGRIVNV 136

Query: 119 SSSMGKLKN 127
           SS +G L +
Sbjct: 137 SSGLGSLTS 145

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 69.9 bits (172), Expect = 3e-15
 Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 7/117 (5%)

Query: 16  TKDEKRGLAAVEKL-KNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP 71
            ++E++G  A  ++ K +G   V    LD++  ASV        ++F +LDIL    G+ 
Sbjct: 32  CRNEEKGEEAAAEIKKETGNAKVEVIQLDLSSLASVRQFAEEFLARFPRLDILINNAGIM 91

Query: 72  DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
               ++    +EL       NY G+  +   L+P+L+ S   RIVN SS   +   I
Sbjct: 92  APPRRLTKDGFELQ---FAVNYLGHFLLTNLLLPVLKASAPSRIVNVSSIAHRAGPI 145

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 68.4 bits (168), Expect = 1e-14
 Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 12/117 (10%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL 70
           AT     R    +E L     DN+    LDVTD  S+ + V  V  +FG++D+L    G 
Sbjct: 29  ATA----RNPDKLESLGELLNDNLEVLELDVTDEESIKAAVKEVIERFGRIDVLVNNAGY 84

Query: 71  PDNWYKM--LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
                       + E   +  + N +G  R+  A +PL++   S RIVN SS  G +
Sbjct: 85  G---LFGPLEETSIEEVRELFEVNVFGPLRVTRAFLPLMRKQGSGRIVNVSSVAGLV 138

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 66.9 bits (164), Expect = 3e-14
 Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 7/107 (6%)

Query: 22  GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKM 77
            LA +  ++  G  N +    DV+D   V++LV     +FG+LDIL    G        +
Sbjct: 34  ALAELAAIEALG-GNAVAVQADVSDEEDVEALVEEALEEFGRLDILVNNAGIARPG--PL 90

Query: 78  LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
              T E  ++ +  N  G   +  A +P ++     RIVN SS  G 
Sbjct: 91  EELTDEDWDRVLDVNLTGVFLLTRAALPHMKKQGGGRIVNISSVAGL 137

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 61.0 bits (148), Expect = 5e-12
 Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTD-PASVDSLVHFVSSQFGKLDIL---GGLPDN 73
           +E+   A    +K +G         DV+D   SV++LV     +FG++DIL    G+   
Sbjct: 40  EEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGP 99

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
              +   T E  ++ I  N  G   +  A +PL++     RIVN SS  G     
Sbjct: 100 DAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGLGGPP 151

Length = 251

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 55.3 bits (134), Expect = 5e-10
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 25/114 (21%)

Query: 21  RGLAAVEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL------ 70
           R    +E L +  G    +   LDVTD A+V++ +  +  +FG++DIL    GL      
Sbjct: 38  RREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPL 97

Query: 71  ----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
                D+W +M           I TN  G      A++P +    S  I+N  S
Sbjct: 98  DEADLDDWDRM-----------IDTNVKGLLNGTRAVLPGMVERKSGHIINLGS 140

Length = 246

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 53.6 bits (130), Expect = 2e-09
 Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           +E+   A   +L+ +G       + DV+D A+V +L+      FG LDIL    G   D 
Sbjct: 38  NEEAAEALAAELRAAG-GEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDA 96

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
              +   + E  ++ I  N  G   +  A +P +  +   RIVN SS  G   N 
Sbjct: 97  --LLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNP 149

Length = 246

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 53.4 bits (129), Expect = 3e-09
 Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 31/126 (24%)

Query: 22  GLAAVEKLKNSGC---------------DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           G A  EKL  +G                  V    LDVTD ASV + V  V ++ G++D+
Sbjct: 17  GRATAEKLARAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDV 76

Query: 67  L---------GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVN 117
           L         G   +      +   + A+    TN +G  RM  A++P ++   S RI+N
Sbjct: 77  LVNNAGVGLAGAAEE------SSIAQ-AQALFDTNVFGILRMTRAVLPHMRAQGSGRIIN 129

Query: 118 ASSSMG 123
            SS +G
Sbjct: 130 ISSVLG 135

Length = 270

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 52.7 bits (127), Expect = 4e-09
 Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 8/115 (6%)

Query: 20  KRGLAAVEKLKNSGCDNVIFHLLDVTDP--ASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
                 +  L  S    +    LDVTD    S +++          LD+L    G+  ++
Sbjct: 33  PSAATELAALGASH-SRLHILELDVTDEIAESAEAVA--ERLGDAGLDVLINNAGILHSY 89

Query: 75  YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129
                   E   +  Q N  G   + +A +PLL      +I+N SS +G + + T
Sbjct: 90  GPASEVDSEDLLEVFQVNVLGPLLLTQAFLPLLLKGARAKIINISSRVGSIGDNT 144

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 50.2 bits (121), Expect = 3e-08
 Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 7/119 (5%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GG 69
            T + E+     VE++K  G  N      DV+D  +V++LV  V ++FG +DIL    G 
Sbjct: 29  VTDRSEEAAAETVEEIKALG-GNAAALEADVSDREAVEALVEKVEAEFGPVDILVNNAGI 87

Query: 70  LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
             DN   ++  + E  +  I  N  G   + +A+I  +    S RI+N SS +G + N 
Sbjct: 88  TRDN--LLMRMSEEDWDAVINVNLTGVFNVTQAVIRAMIKRRSGRIINISSVVGLIGNP 144

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 50.3 bits (120), Expect = 3e-08
 Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 10/122 (8%)

Query: 2   KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF 61
           KR   VH      T  +E R     E    SG  N+  H++D++DP  V   V     + 
Sbjct: 23  KRGGTVHMVCRNQTRAEEARK----EIETESGNQNIFLHIVDMSDPKQVWEFVEEFKEEG 78

Query: 62  GKLDILGGLPDNWYKMLTQ---TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNA 118
            KL +   L +N   M+ +   T +  EK   TN  G   +   LIP+L+  + PR++  
Sbjct: 79  KKLHV---LINNAGCMVNKRELTEDGLEKNFATNTLGTYILTTHLIPVLEKEEDPRVITV 135

Query: 119 SS 120
           SS
Sbjct: 136 SS 137

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 49.8 bits (120), Expect = 5e-08
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 7/114 (6%)

Query: 19  EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNW 74
           E    A V ++   G    +    DV+D  SV+  V    ++FG +DIL    G   DN 
Sbjct: 40  EAGAEALVAEIGALGGK-ALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDN- 97

Query: 75  YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
             ++    E  ++ I TN  G   + +A+   +    S RI+N SS +G + N 
Sbjct: 98  -LLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP 150

Length = 248

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 49.5 bits (119), Expect = 7e-08
 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 24  AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLT 79
           A  E ++ +G        +DV D A++ + V      FG+LDIL    G  P   +  + 
Sbjct: 45  ATAELVEAAGGKARAR-QVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMD 103

Query: 80  QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
              E  E+ I  N  G   + +A +P L  +   RIV  SS  G
Sbjct: 104 D--EQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAG 145

Length = 251

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 48.3 bits (116), Expect = 8e-08
 Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 13/110 (11%)

Query: 24  AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLT 79
             V +L+  G + V     DV D  ++ +L+  + +  G LD +    G L D     L 
Sbjct: 42  ELVAELEALGAE-VTVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLDD---GPLE 97

Query: 80  -QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
             T E  E+ +     G   + E    L    D    V  SS  G L + 
Sbjct: 98  ELTPERFERVLAPKVTGAWNLHELTRDL----DLGAFVLFSSVAGVLGSP 143

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.1 bits (118), Expect = 8e-08
 Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 21/122 (17%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           + Y        +E+     +E++K  G D  I    DV+    V++LV  +  +FGK+DI
Sbjct: 34  IAYD------INEEAAQELLEEIKEEGGD-AIAVKADVSSEEDVENLVEQIVEKFGKIDI 86

Query: 67  L--------GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNA 118
           L         GL      +   T E  ++ I  N  G   +    +P +    S  IVN 
Sbjct: 87  LVNNAGISNFGL------VTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNI 140

Query: 119 SS 120
           SS
Sbjct: 141 SS 142

Length = 247

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 49.4 bits (118), Expect = 9e-08
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 9/85 (10%)

Query: 26  VEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGL-PDNWYKMLTQ 80
           V+K++  G + V F L DVTDP SV S V       G++++L    G       +++ T+
Sbjct: 51  VDKIRADGGEAVAFPL-DVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTE 109

Query: 81  TYELAEKCIQTNYYGNKRMCEALIP 105
            +   E  +Q +  G  R+  A++P
Sbjct: 110 QF---ESQVQIHLVGANRLATAVLP 131

Length = 274

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 47.2 bits (113), Expect = 4e-07
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 9/107 (8%)

Query: 22  GLAAVEKLKNSGCDNVIFHLLDVTDPASVD-SLVHFVSSQFGKLDIL----GGLPDNWYK 76
           GLAA+      G  N     LDVTD A+ D +L  F ++  G+LD+L    G L    ++
Sbjct: 37  GLAALAAEL--GAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFE 94

Query: 77  MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
                 E  ++ I  N  G      A +P L+ +   R++N SS+  
Sbjct: 95  --DIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASA 139

Length = 260

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 46.8 bits (112), Expect = 6e-07
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 6/104 (5%)

Query: 26  VEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQT- 81
             +    G  +     LD++D    + +V      FG LDIL    G+  +   +   T 
Sbjct: 44  KSECLELGAPSPHVVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGI--SMRSLFHDTS 101

Query: 82  YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
            ++  K ++ NY+G   + +A +P L       IV  SS  GK+
Sbjct: 102 IDVDRKIMEVNYFGPVALTKAALPHLIERSQGSIVVVSSIAGKI 145

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 46.5 bits (111), Expect = 6e-07
 Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 11/114 (9%)

Query: 18  DEKRGLAAVEKLKNSGCDN---VIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-----GG 69
            E +   AVE+++     +   V +   D++D   V+        + G  D++       
Sbjct: 34  SESKLEEAVEEIEAEANASGQKVSYISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGIS 93

Query: 70  LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
           +P  +      T E  E+ +  NY+G+  +  A++PL++      IV  SS   
Sbjct: 94  IPGLF---EDLTAEEFERGMDVNYFGSLNVAHAVLPLMKEQRPGHIVFVSSQAA 144

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 8e-07
 Identities = 27/111 (24%), Positives = 38/111 (34%), Gaps = 25/111 (22%)

Query: 24  AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL---------- 70
                L+ +G         D+ DPASV       ++  G LD L    G+          
Sbjct: 46  ELAAALEAAGGR-AHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELD 104

Query: 71  PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
            D W           +  +  N  G   M  A +P L+ S   RIVN +S 
Sbjct: 105 IDTW-----------DAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASD 144

Length = 250

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 46.5 bits (111), Expect = 9e-07
 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 14/109 (12%)

Query: 26  VEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLD---------ILGGLPDNWYK 76
            ++L+    D +    LDVT P  +     +V    G+           ILG   D    
Sbjct: 39  AKELRRVCSDRLRTLQLDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEEL- 97

Query: 77  MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
           +    Y    KC++ N +G   + +A +PLL+ +   R+VN SS  G++
Sbjct: 98  LPMDDY---RKCMEVNLFGTVEVTKAFLPLLRRAKG-RVVNVSSMGGRV 142

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 15/113 (13%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL------GGLPDNW 74
           R  AA    +    D  +  LLDVTD  ++D++V    + FG +D+L      G      
Sbjct: 36  RSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYG------ 89

Query: 75  YKMLTQTYELAE--KCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
           ++   +   LAE  +  + N +G   M +A++P ++      IVN  +SMG L
Sbjct: 90  HEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNI-TSMGGL 141

Length = 277

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 24 AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
          AA E L+ +G    I   +DVTD  ++++ + +    FG +DIL
Sbjct: 43 AAAEALQKAGGK-AIGVAMDVTDEEAINAGIDYAVETFGGVDIL 85

Length = 258

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 7/111 (6%)

Query: 17  KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPD 72
             E+     VE+LK  G   +   + DV+D   V ++V  +  + G +DIL    G   D
Sbjct: 31  SSEEGAEEVVEELKAYGVKALGV-VCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRD 89

Query: 73  NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
           N   ++    E  +  I TN  G   + +A++ ++    S RI+N SS +G
Sbjct: 90  NL--LMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVG 138

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)

Query: 22  GLAAVEKLKNSGCDNVIFHLLDVTDPASVD-SLVHFVSSQFGKLDIL----GGLPDNWYK 76
           GLAA+      G +NV+   LDVTD A+   +L  F ++  G+LD L    G      ++
Sbjct: 36  GLAAL--AAELGAENVVAGALDVTDRAAWAAALADFAAATGGRLDALFNNAGVGRGGPFE 93

Query: 77  MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
                    ++ +  N  G      A +P L+ +   R++N +SS  
Sbjct: 94  --DVPLAAHDRMVDINVKGVLNGAYAALPYLKATPGARVINTASSSA 138

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 7/116 (6%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           + +    +  +  +    N +    DVTD   V++L+     +FG  D++    G  P  
Sbjct: 35  NLEEAAKSTIQEISEAGYNAVAVGADVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPIT 94

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMC-EALIPLLQLSDSPRIVNASSSMGKLKNI 128
              +LT T E  +K    N +G       A     +L    +I+NASS  G     
Sbjct: 95  --PLLTITEEDLKKVYAVNVFGVLFGIQAAARQFKKLGHGGKIINASSIAGVQGFP 148

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 43.9 bits (104), Expect = 5e-06
 Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 25/118 (21%)

Query: 17  KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL------GGL 70
           K +        +++  G   V+    DV+ P  V+ +   V  +FG+LD+L      G  
Sbjct: 31  KSKDAAAEVAAEIEELGGKAVVVRA-DVSQPQDVEEMFAAVKERFGRLDVLVSNAAAGAF 89

Query: 71  -------PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
                  P +W           +  + TN        +    L++     RIV  SS 
Sbjct: 90  RPLSELTPAHW-----------DAKMNTNLKALVHCAQQAAKLMRERGGGRIVAISSL 136

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 39/134 (29%), Positives = 54/134 (40%), Gaps = 32/134 (23%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL- 70
           T +D+K    A  +L N G  NV+    DV D A V   V  + + FG LD+L    G+ 
Sbjct: 36  TARDQKELEEAAAELNNKG--NVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVG 93

Query: 71  ---------PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
                    P+ W  +           I TN  G     +A +P L+      I+N SS 
Sbjct: 94  HFAPVEELTPEEWRLV-----------IDTNLTGAFYTIKAAVPALKRGGG-YIINISSL 141

Query: 122 MGKLKNITNEWAKG 135
            G     TN +A G
Sbjct: 142 AG-----TNFFAGG 150

Length = 237

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 44.0 bits (104), Expect = 6e-06
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 6/86 (6%)

Query: 42  LDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGNK 97
           +D+ DP +    V  V+ QFG+LD L    G     W  +     +  ++    N     
Sbjct: 61  IDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFV--WGTIADGDADTWDRMYGVNVKTTL 118

Query: 98  RMCEALIPLLQLSDSPRIVNASSSMG 123
              +A +P L  S   RIVN  +   
Sbjct: 119 NASKAALPALTASGGGRIVNIGAGAA 144

Length = 239

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 43.5 bits (103), Expect = 7e-06
 Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77
           R   +   L     D V+   LDVTDP S+ +     ++Q   +D++    G+      +
Sbjct: 36  RDPGSAAHLVAKYGDKVVPLRLDVTDPESIKAA----AAQAKDVDVVINNAGVLKPATLL 91

Query: 78  LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN 130
                E  ++ +  N +G  R+ +A  P+L+ +    IVN  +S+  LKN   
Sbjct: 92  EEGALEALKQEMDVNVFGLLRLAQAFAPVLKANGGGAIVNL-NSVASLKNFPA 143

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 43.3 bits (103), Expect = 9e-06
 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 19/88 (21%)

Query: 42  LDVTDPASVDSLVHFVSSQFGKLDIL---------GGLPDNWYKMLTQTYELAEKCIQTN 92
           LDVTDPASV +           + IL         G L      +L    +     ++TN
Sbjct: 56  LDVTDPASVAAAA----EAASDVTILVNNAGIFRTGSL------LLEGDEDALRAEMETN 105

Query: 93  YYGNKRMCEALIPLLQLSDSPRIVNASS 120
           Y+G   M  A  P+L  +    IVN  S
Sbjct: 106 YFGPLAMARAFAPVLAANGGGAIVNVLS 133

Length = 238

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 42  LDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYELAEK----CIQTNYYGNK 97
           LDVTD A+V + V      FG+LDI+  + +  Y +     E+ E      I TN++G  
Sbjct: 56  LDVTDRAAVFAAVETAVEHFGRLDIV--VNNAGYGLFGMIEEVTESEARAQIDTNFFGAL 113

Query: 98  RMCEALIPLLQLSDSPRIVNASS 120
            + +A++P L+   S  I+  SS
Sbjct: 114 WVTQAVLPYLREQRSGHIIQISS 136

Length = 275

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 41.8 bits (98), Expect = 4e-05
 Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 9/91 (9%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDIL-----GGLPDNWYKMLTQTYELAEKCIQTNYYGNK 97
           D+T    + +L  F  S+ GK+DIL     GG P   + M    +  A    + N +   
Sbjct: 68  DITSEQELSALADFALSKLGKVDILVNNAGGGGPKP-FDMPMADFRRA---YELNVFSFF 123

Query: 98  RMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
            + + + P ++ +    I+  +S   + KNI
Sbjct: 124 HLSQLVAPEMEKNGGGVILTITSMAAENKNI 154

Length = 255

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 16/100 (16%)

Query: 42  LDVTDPASVDSLVHFVSSQFGKLDIL---------GGLPDNWYKMLTQTYELAEKCIQTN 92
           LDVTD AS+ + V  + ++ G++D+L         G + D          + A +  + N
Sbjct: 53  LDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIED-------VPIDEARRQFEVN 105

Query: 93  YYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEW 132
            +G  R+ + ++P ++   S RI+N SS  GK+      W
Sbjct: 106 LFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAW 145

Length = 273

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 4e-05
 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 13/108 (12%)

Query: 24  AAVEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLT 79
             V ++       N    + DV+D  SV++ V  V S FG++DIL    G+      +L 
Sbjct: 49  EDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGV-----ALLA 103

Query: 80  QTYELAE----KCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
              +++E    K I  N  G+  M +A+   +  +   +IVN +S  G
Sbjct: 104 PAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAG 151

Length = 255

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 4/87 (4%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRM 99
           DV DPA V+ +      +FG LD+L    G+      +   T E  E+ +  N  G    
Sbjct: 66  DVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYF 125

Query: 100 CEALIPLLQLSDSPR-IVNASSSMGKL 125
             A +PLL+ S     I+  SS  G+L
Sbjct: 126 ARAAVPLLKASGHGGVIIALSSVAGRL 152

Length = 264

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 41.0 bits (97), Expect = 5e-05
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 14/95 (14%)

Query: 37  VIFHLLDVTDPASVDSLVHFVSSQFGKLD-------ILGGL-PDNWYKMLTQTYELAEKC 88
           +   LL  T P +   L   +  QFG+LD       +LG L P     M  Q  E+ +  
Sbjct: 67  IPLDLLTAT-PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGP-----MEQQDPEVWQDV 120

Query: 89  IQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
           +Q N      + +AL+PLL  S +  +V  SSS+G
Sbjct: 121 MQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVG 155

Length = 247

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 41.1 bits (97), Expect = 6e-05
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 6/87 (6%)

Query: 42  LDVTDPASVDSLVHFVSSQFGKLDIL----G-GLPDNWYKMLTQTYELAEKCIQTNYYGN 96
           LDV D  SV++L   + S++  LDIL    G   P +         + A+  I TN  G 
Sbjct: 57  LDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRD-PASDLDKADTEIDTNLIGP 115

Query: 97  KRMCEALIPLLQLSDSPRIVNASSSMG 123
            R+ +A +P L+      IVN SS + 
Sbjct: 116 IRLIKAFLPHLKKQPEATIVNVSSGLA 142

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 41.3 bits (97), Expect = 6e-05
 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 12/109 (11%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDIL-----GGLPDNWYKMLTQTYELAEKCIQTNYYGNK 97
           D+  P +   L       FG+LDI+     G +P+    +L+ + +        N     
Sbjct: 67  DLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPN---PLLSTSTKDLADAFTFNVATAH 123

Query: 98  RMCEALIPL-LQLSDSPRIVNASSSMGKLKN---ITNEWAKGVLSDWMR 142
            +  A +PL L+ S    ++N SS+MG+L          AK  L+ + R
Sbjct: 124 ALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTR 172

Length = 263

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 40.8 bits (96), Expect = 7e-05
 Identities = 24/123 (19%), Positives = 39/123 (31%), Gaps = 27/123 (21%)

Query: 36  NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G-GLPDNWYKMLTQTYELAEKCIQ 90
                  DV+D  ++ + V  +   FGK+DIL    G                     I 
Sbjct: 55  EATAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRH---PAEEFPEAEWRDVID 111

Query: 91  TNYYGNKRMCEALIPLLQLSDSPRIVNASS---------------SMGKLKNIT----NE 131
            N  G   + +A+   +      +I+N  S               S G +  +T     E
Sbjct: 112 VNLNGVFFVSQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATE 171

Query: 132 WAK 134
           WA+
Sbjct: 172 WAR 174

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 40.9 bits (96), Expect = 8e-05
 Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 10/87 (11%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAE--KCIQTNYYGN 96
           DV+D     +++ +V   +  L IL    GG   N  K     Y   E     +TN +  
Sbjct: 68  DVSDDEDRRAILDWVEDHWDGLHILVNNAGG---NIRKAAID-YTEDEWRGIFETNLFSA 123

Query: 97  KRMCEALIPLLQLSDSPRIVNASSSMG 123
             +     PLL+   S  IVN  S  G
Sbjct: 124 FELSRYAHPLLKQHASSAIVNIGSVSG 150

Length = 257

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 40.7 bits (96), Expect = 8e-05
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDIL-----GGLPDNWYKMLTQTYELAEKCIQTNYYGNK 97
           D+TDP  +D LV      FG++DIL     G  P         T E   +          
Sbjct: 58  DLTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGP---FAELTDEDWLEAFDLKLLSVI 114

Query: 98  RMCEALIPLLQLSDSPRIVNASSSMGK 124
           R+  A++P ++     RIVN SS   K
Sbjct: 115 RIVRAVLPGMKERGWGRIVNISSLTVK 141

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 40.7 bits (96), Expect = 8e-05
 Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRM 99
           DV+    V      +  + G + IL    G+     K+L    E  EK  + N   +   
Sbjct: 56  DVSKREEVYEAAKKIKKEVGDVTILINNAGVVSG-KKLLELPDEEIEKTFEVNTLAHFWT 114

Query: 100 CEALIPLLQLSDSPRIVNASSSMGKL 125
            +A +P +   +   IV  +S  G +
Sbjct: 115 TKAFLPDMLERNHGHIVTIASVAGLI 140

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 34/130 (26%)

Query: 24  AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP--------- 71
           A  +++  +G D +     D++D  +VD+LV  V  + G +DIL    G           
Sbjct: 79  AVADRITRAGGDAMA-VPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESL 137

Query: 72  DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE 131
           D W+          E+ +  NYY   R+   L P +       I+N ++           
Sbjct: 138 DRWHD--------VERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVAT----------- 178

Query: 132 WAKGVLSDWM 141
           W  GVLS+  
Sbjct: 179 W--GVLSEAS 186

Length = 293

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 25/124 (20%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL---- 70
           DE+     VE ++  G         DVTD A++++ V     +FG++DIL    G+    
Sbjct: 40  DEEAAEELVEAVEALG-RRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDK 98

Query: 71  ------PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
                  D W ++           I  N  G   +  A++P ++     RIVN SS  G 
Sbjct: 99  PLADMSDDEWDEV-----------IDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGL 147

Query: 125 LKNI 128
               
Sbjct: 148 PGWP 151

Length = 249

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 13/85 (15%)

Query: 43  DVTDPASVDSLVHFVSSQFGK-LDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKR 98
           D++ P    + +  V ++    LD L    G+        T    L  K    NY+G + 
Sbjct: 39  DLSTPEGRAAAIADVLARCSGVLDGLVNCAGVGG------TTVAGLVLK---VNYFGLRA 89

Query: 99  MCEALIPLLQLSDSPRIVNASSSMG 123
           + EAL+P L+    P  V  SS  G
Sbjct: 90  LMEALLPRLRKGHGPAAVVVSSIAG 114

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 29/133 (21%), Positives = 44/133 (33%), Gaps = 33/133 (24%)

Query: 22  GLAAVEKLKNSGC-------------------DNVIFHLLDVTDPASVDSLVHFVSSQFG 62
           GLA VE+L   G                    DN  F  +DVT    V + +    ++FG
Sbjct: 15  GLATVERLLAQGAKVVILDLPNSPGETVAKLGDNCRFVPVDVTSEKDVKAALALAKAKFG 74

Query: 63  KLDIL--------GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQ----LS 110
           +LDI+             N       + EL ++ I  N  G   +       +       
Sbjct: 75  RLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTFNVIRLAAGAMGKNEPDQ 134

Query: 111 DSPR--IVNASSS 121
              R  I+N +S 
Sbjct: 135 GGERGVIINTASV 147

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 5/104 (4%)

Query: 24  AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQ 80
           A  E+++  G   V+    DV+D   V + +  + ++ G +DIL    G+   + K L  
Sbjct: 46  AVAEEVEAYGV-KVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISK-FGKFLEL 103

Query: 81  TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
                EK IQ N  G      A++P +    S  I+N SS+ G+
Sbjct: 104 DPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQ 147

Length = 239

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 18 DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
          +E+       ++        I    DV+D A V++ V     +FG +DIL
Sbjct: 38 NEEAAERVAAEI--LAGGRAIAVAADVSDEADVEAAVAAALERFGSVDIL 85

Length = 251

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 24/96 (25%)

Query: 42  LDVTDPASVDSLVHFVSSQFGKLDIL-------------GGLPDNWYKMLTQTYELAEKC 88
           LDVTD   VD+ V       G+LDIL                  +W +M           
Sbjct: 59  LDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRM----------- 107

Query: 89  IQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
           I TN  G      A +P   L +   IVN SS  G+
Sbjct: 108 IDTNLLGLMYTTHAALPHHLLRNKGTIVNISSVAGR 143

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 9/93 (9%)

Query: 36  NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-------GGLPDNWYKMLTQTYELAEKC 88
             I   +DV+DP S  ++     S FG +D L       GG+      ++T  ++  +K 
Sbjct: 56  TAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMK--LDLLITVPWDYYKKF 113

Query: 89  IQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
           +  N  G      A+   +       IVN SS+
Sbjct: 114 MSVNLDGALVCTRAVYKHMAKRGGGAIVNQSST 146

Length = 250

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 12/111 (10%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
            ++ G AA  +L     D   F  LDVTD     ++V      FG+LD+L    G+    
Sbjct: 38  LDEEGQAAAAELG----DAARFFHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTG- 92

Query: 75  YKMLTQTYELAE--KCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
                +T  L E  + +  N  G      A+IP ++ +    I+N SS  G
Sbjct: 93  --GTVETTTLEEWRRLLDINLTGVFLGTRAVIPPMKEAGGGSIINMSSIEG 141

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 24/115 (20%)

Query: 22  GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL-------- 70
           G  A  K+      +VI+   DVT    +  ++   +++FG LDIL    G+        
Sbjct: 37  GAEAAAKVAGDAGGSVIYLPADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEE 96

Query: 71  --PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
             P++W ++           I            A +P ++     RI+N +S+ G
Sbjct: 97  FPPEDWDRI-----------IAVMLTSAFHTIRAALPHMKKQGWGRIINIASAHG 140

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYELA-------EKCIQTNYYG 95
           D+TD A+VD  V  + ++ G +D L    +N  + + ++ E +       E+ +  NY+G
Sbjct: 428 DLTDSAAVDHTVKDILAEHGHVDYL---VNNAGRSIRRSVENSTDRFHDYERTMAVNYFG 484

Query: 96  NKRMCEALIPLLQLSDSPRIVNASS 120
             R+   L+P ++      +VN SS
Sbjct: 485 AVRLILGLLPHMRERRFGHVVNVSS 509

Length = 657

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 4e-04
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 6/108 (5%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQ 80
           R   A++ LK    D +    LDVTD A+V ++V    +  G++D++  + +  Y +   
Sbjct: 34  RRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVV--VSNAGYGLFGA 91

Query: 81  TYELA----EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
             EL+     + I TN  G+ ++  A +P L+     RIV  SS  G+
Sbjct: 92  AEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ 139

Length = 276

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 38.6 bits (90), Expect = 4e-04
 Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 26  VEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTY 82
           V+K+K++G     +H+ D++D   V      +  QFG++D+L    G+ +   ++     
Sbjct: 46  VDKIKSNGGKAKAYHV-DISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPV 104

Query: 83  ELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
           ++ +K +  +  G   M + L+PL+ +     I+N SS  G+
Sbjct: 105 DVFDKIMAVDMRGTFLMTKMLLPLM-MEQGGSIINTSSFSGQ 145

Length = 272

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 8/99 (8%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP 71
           TT      + AV++L      +VI   LDVT    +D L   V    GK+D L     + 
Sbjct: 26  TTWPPALRMGAVDELAKELPADVIP--LDVTSDEDIDELFEKVKEDGGKIDFLVHSIAMS 83

Query: 72  DNWYKM---LTQTYELAEKCIQTNYYGNKRMCEALIPLL 107
               K    L  + E   K +  + Y    + +A  PL+
Sbjct: 84  PEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKPLM 122

Length = 239

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 15/118 (12%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP 71
             ++E R  +  ++L + G +  +    DV+D  + + L+    ++FG +DIL    G+ 
Sbjct: 31  AARNETRLASLAQELADHGGE-ALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGI- 88

Query: 72  DNWYKMLT---QTYELA--EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
                M +   +  +L+  E+ ++ NY G      A +P L+ S   +IV  SS  G 
Sbjct: 89  ----TMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRG-QIVVVSSLAGL 141

Length = 263

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 38.3 bits (89), Expect = 7e-04
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRM 99
           D+TD A+V+S    + +++G+LD+L    G+ + +   L Q+ E   +    N  G    
Sbjct: 323 DITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGA--F 380

Query: 100 CEALIPLLQLSDSPRIVNASSSMGKL 125
             A      +S    IVN  S    L
Sbjct: 381 ACARAAARLMSQGGVIVNLGSIASLL 406

Length = 520

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 15/111 (13%)

Query: 19  EKRGLAAVEKLKNSGCDNVIF-HLLDVTDPASVDSLVHFVSSQFGKLDIL--------GG 69
           ++   AA             F    DV    +V++LV FV++++G+LD+L        GG
Sbjct: 36  DRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGG 95

Query: 70  LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
                  ++T      +  ++ N  G     +  IP++Q      IVN +S
Sbjct: 96  ------TVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTAS 140

Length = 252

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 8e-04
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 17/88 (19%)

Query: 39  FHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYG 95
           F   D+ DPAS+D+ V  +    G++D L    G+P         T    E   + N+ G
Sbjct: 27  FIQADLGDPASIDAAVAALP---GRIDALFNIAGVP--------GTAP-VELVARVNFLG 74

Query: 96  NKRMCEALIPLLQLSDSPRIVNASSSMG 123
            + + EAL+P  +++    IVN +S  G
Sbjct: 75  LRHLTEALLP--RMAPGGAIVNVASLAG 100

Length = 241

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 37.9 bits (88), Expect = 8e-04
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 16/114 (14%)

Query: 22  GLAAVEKLKNSGC-----------DNVIFHL-LDVTDPASVDSLVHFVSSQFGKLDIL-- 67
           G A V +LK  G             N + +  +DV++   V   + +V S++G++DIL  
Sbjct: 19  GKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78

Query: 68  -GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
             G+ +++  +     +  ++ I  N  G   M +  IP +   D   I+N +S
Sbjct: 79  NAGI-ESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIAS 131

Length = 258

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 37.6 bits (88), Expect = 8e-04
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 35 DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
            V+   LDVTDPAS  + +  V +  G +D+L
Sbjct: 50 GLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL 82

Length = 273

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 30/125 (24%)

Query: 13  EATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GG 69
            A  +  + GLAA   +K      V++H  D++ PA+++ +V +   QFG +DIL    G
Sbjct: 37  AAEIEAVRAGLAAKHGVK------VLYHGADLSKPAAIEDMVAYAQRQFGGVDILVNNAG 90

Query: 70  L----------PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNAS 119
           +           + W           +  I  N           +P ++     RI+N +
Sbjct: 91  IQHVAPIEDFPTEKW-----------DAIIALNLSAVFHTTRLALPHMKKQGWGRIINIA 139

Query: 120 SSMGK 124
           S  G 
Sbjct: 140 SVHGL 144

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 42 LDVTDPASVDSLVHFVSSQFGKLDIL 67
          LDVT   S+D +V     +FG +DIL
Sbjct: 59 LDVTRQDSIDRIVAAAVERFGGIDIL 84

Length = 257

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 36.8 bits (86), Expect = 0.002
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)

Query: 39 FHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPD 72
          FH  DV DP  V +LV  +  + G+LD+L    GG P 
Sbjct: 51 FHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPY 88

Length = 252

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 43 DVTDPASVDSLVHFVSSQFGKLDIL 67
          D+TD  SV +L+     +FG LD L
Sbjct: 64 DLTDEESVAALMDTAREEFGGLDAL 88

Length = 248

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 11/46 (23%), Positives = 19/46 (41%)

Query: 22 GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
                K  N      + + LDV+D   V S +   + +FG  D++
Sbjct: 36 TAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM 81

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 36.3 bits (84), Expect = 0.003
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 18/99 (18%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDILGGLPDN----WYKMLTQTYELAE--KCIQTN---- 92
           DV+D A V++ V     QFG++D   G  +N      + LT+ +   E  K +  N    
Sbjct: 62  DVSDEAQVEAYVDATVEQFGRID---GFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGV 118

Query: 93  YYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE 131
           +YG     E ++ +++   S  IVN ++S+G ++ + N+
Sbjct: 119 FYG----LEKVLKVMREQGSGMIVN-TASVGGIRGVGNQ 152

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 36.1 bits (84), Expect = 0.003
 Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 25/97 (25%)

Query: 42  LDVTDPASVDSLVHFVSSQFGKLDIL---GGL-----------PDNWYKMLTQTYELAEK 87
           LDV+D  S+++ +  +  +F  +DIL    GL            ++W  M          
Sbjct: 57  LDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETM---------- 106

Query: 88  CIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
            I TN  G   +   ++P++   +   I+N  S  G+
Sbjct: 107 -IDTNVKGLLNVTRLILPIMIARNQGHIINLGSIAGR 142

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 36.0 bits (83), Expect = 0.003
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 11/93 (11%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDIL-------GGLPDNWYKMLTQTYELAEKCIQTNYYG 95
           +VT    ++++V    SQFG + IL       G  P +    +  T E  E   + N + 
Sbjct: 56  NVTSEQDLEAVVKATVSQFGGITILVNNAGGGGPKPFD----MPMTEEDFEWAFKLNLFS 111

Query: 96  NKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
             R+ +   P +Q +    I+N SS   + KN+
Sbjct: 112 AFRLSQLCAPHMQKAGGGAILNISSMSSENKNV 144

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 36.1 bits (83), Expect = 0.003
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 8/87 (9%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDILGGLPDN--W--YKMLTQTYE-LAEKCIQTNYYGNK 97
           D+TD  SVD+ V       G +D+   L +N  W  +   T+T   L E+ I  N  G  
Sbjct: 60  DITDRDSVDTAVAAAEQALGPVDV---LVNNAGWDKFGPFTKTEPPLWERLIAINLTGAL 116

Query: 98  RMCEALIPLLQLSDSPRIVNASSSMGK 124
            M  A++P +    + RIVN +S   +
Sbjct: 117 HMHHAVLPGMVERGAGRIVNIASDAAR 143

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 15/113 (13%)

Query: 19  EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--------GGL 70
           E+ G   ++ L+ +G D       DV D + + +L      ++G +D++        GG 
Sbjct: 34  EEGGEETLKLLREAGGDGFYQRC-DVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGG- 91

Query: 71  PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
                     + E  +  I  N  G  + C+A +PL +   S RIVN +S  G
Sbjct: 92  -----FFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAG 139

Length = 270

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 36.1 bits (84), Expect = 0.003
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 11/87 (12%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQ------TYELAEKCIQTNYYGN 96
           D+ D +    LV  V  +FGKLDI   L +N      Q      T E  EK  +TN +  
Sbjct: 85  DLGDESFCRDLVKEVVKEFGKLDI---LVNNAAYQHPQESIEDITTEQLEKTFRTNIFSM 141

Query: 97  KRMCEALIPLLQLSDSPRIVNASSSMG 123
             + +A +P L+   S  I+N +S   
Sbjct: 142 FYLTKAALPHLKKGSS--IINTTSVTA 166

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 4/94 (4%)

Query: 35  DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQT 91
            +V     D  DP    +LV  +  +FG++D+L    G+      +   +    E     
Sbjct: 45  GDVEAVPYDARDPEDARALVDALRDRFGRIDVLVHNAGIGRP-TTLREGSDAELEAHFSI 103

Query: 92  NYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
           N      +  AL+P L+ + S R+V  +S  GK 
Sbjct: 104 NVIAPAELTRALLPALREAGSGRVVFLNSLSGKR 137

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 36.1 bits (84), Expect = 0.003
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 15 TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP 71
            ++ ++G A   +L+  G    +F   D++D      +V      FG+LD L    GL 
Sbjct: 37 CGRNAEKGEAQAAELEALGAK-AVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLT 95

Query: 72 D 72
          D
Sbjct: 96 D 96

Length = 260

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 35.9 bits (83), Expect = 0.003
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 8/88 (9%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDIL---GGLP--DNWYKMLTQTYELAEKCIQTNYYGNK 97
           DV DPASV + +     + G++DIL    G+    ++  M  +  +     I  N  G  
Sbjct: 62  DVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFH---IDINIKGVW 118

Query: 98  RMCEALIPLLQLSDSPRIVNASSSMGKL 125
            + +A++P +      RIV  SS  G +
Sbjct: 119 NVTKAVLPEMIARKDGRIVMMSSVTGDM 146

Length = 263

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 35.8 bits (83), Expect = 0.004
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 9/83 (10%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDILGG-----LPDNWYKMLTQTYELAEKCIQTNYYGNK 97
           DV+D A     V     + G+LDIL        P    + +T   E  +K  +TN Y   
Sbjct: 104 DVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITA--EQLDKTFKTNIYSYF 161

Query: 98  RMCEALIPLLQLSDSPRIVNASS 120
            M +A +P L+   +  I+N  S
Sbjct: 162 HMTKAALPHLKQGSA--IINTGS 182

Length = 290

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 35.7 bits (83), Expect = 0.004
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 5/49 (10%)

Query: 19 EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
          EKR    VE+L      +++    DVT+  S+D+L   +  ++GKLD L
Sbjct: 45 EKR----VEELAEELGSDLVLPC-DVTNDESIDALFATIKKKWGKLDGL 88

Length = 259

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 35.6 bits (82), Expect = 0.004
 Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 25/122 (20%)

Query: 17  KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--------G 68
           + E+     V++L+ +G         DV     +++LV    +++G +D+L        G
Sbjct: 35  RGEEGLATTVKELREAGV-EADGRTCDVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGG 93

Query: 69  GLPDNWYKMLTQTYELAEK----CIQTNYYGNKRMCEALIPLLQLSDSP--RIVNASSSM 122
           G           T ELA++     ++TN  G  R+ + ++    + +    RI+N +S+ 
Sbjct: 94  G----------ATAELADELWLDVVETNLTGVFRVTKEVLKAGGMLERGTGRIINIASTG 143

Query: 123 GK 124
           GK
Sbjct: 144 GK 145

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	147
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.96
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.96
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.95
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.94
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.9
PRK08339	263	short chain dehydrogenase; Provisional	99.9
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.89
PRK06139	330	short chain dehydrogenase; Provisional	99.89
PRK08862	227	short chain dehydrogenase; Provisional	99.89
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.89
PRK07478	254	short chain dehydrogenase; Provisional	99.88
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK05876	275	short chain dehydrogenase; Provisional	99.88
PRK07062	265	short chain dehydrogenase; Provisional	99.88
PRK07063	260	short chain dehydrogenase; Provisional	99.87
PRK08589	272	short chain dehydrogenase; Validated	99.87
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.87
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.87
PRK07109	334	short chain dehydrogenase; Provisional	99.87
PRK08303	305	short chain dehydrogenase; Provisional	99.87
PRK05599	246	hypothetical protein; Provisional	99.87
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
PRK07791	286	short chain dehydrogenase; Provisional	99.86
PRK05867	253	short chain dehydrogenase; Provisional	99.86
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.86
PRK07677	252	short chain dehydrogenase; Provisional	99.86
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
KOG0725	270	consensus Reductases with broad range of substrate	99.86
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.85
PLN00015	308	protochlorophyllide reductase	99.85
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.85
PRK05855	582	short chain dehydrogenase; Validated	99.85
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK06114	254	short chain dehydrogenase; Provisional	99.85
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.85
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.84
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.84
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.84
PRK07024	257	short chain dehydrogenase; Provisional	99.84
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.84
PRK06172	253	short chain dehydrogenase; Provisional	99.84
PRK07035	252	short chain dehydrogenase; Provisional	99.84
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.84
PRK05872	296	short chain dehydrogenase; Provisional	99.84
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.83
PRK07825	273	short chain dehydrogenase; Provisional	99.83
PRK06194	287	hypothetical protein; Provisional	99.83
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.83
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.83
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.83
KOG1208	314	consensus Dehydrogenases with different specificit	99.83
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.83
PLN02253	280	xanthoxin dehydrogenase	99.83
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.83
PRK07831	262	short chain dehydrogenase; Provisional	99.83
PRK05650	270	short chain dehydrogenase; Provisional	99.83
PRK09242	257	tropinone reductase; Provisional	99.83
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.83
PRK06484	520	short chain dehydrogenase; Validated	99.82
PRK07985	294	oxidoreductase; Provisional	99.82
PRK06128	300	oxidoreductase; Provisional	99.82
PRK08643	256	acetoin reductase; Validated	99.82
PRK06398	258	aldose dehydrogenase; Validated	99.82
PRK05866	293	short chain dehydrogenase; Provisional	99.82
PRK07890	258	short chain dehydrogenase; Provisional	99.82
PRK05854	313	short chain dehydrogenase; Provisional	99.82
PRK08278	273	short chain dehydrogenase; Provisional	99.82
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.82
PLN02780	320	ketoreductase/ oxidoreductase	99.82
PRK09186	256	flagellin modification protein A; Provisional	99.81
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.81
PRK07832	272	short chain dehydrogenase; Provisional	99.81
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.81
PRK07454	241	short chain dehydrogenase; Provisional	99.81
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.81
PRK06125	259	short chain dehydrogenase; Provisional	99.81
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.81
PRK06484	520	short chain dehydrogenase; Validated	99.81
PRK08265	261	short chain dehydrogenase; Provisional	99.8
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.8
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.8
PRK07904	253	short chain dehydrogenase; Provisional	99.8
PRK05993	277	short chain dehydrogenase; Provisional	99.8
PRK06182	273	short chain dehydrogenase; Validated	99.8
PRK08703	239	short chain dehydrogenase; Provisional	99.8
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.8
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.8
PRK07774	250	short chain dehydrogenase; Provisional	99.8
PRK07576	264	short chain dehydrogenase; Provisional	99.8
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
PRK07069	251	short chain dehydrogenase; Validated	99.8
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.8
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK12743	256	oxidoreductase; Provisional	99.79
PRK07814	263	short chain dehydrogenase; Provisional	99.79
PRK12747	252	short chain dehydrogenase; Provisional	99.79
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.79
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.79
PRK08267	260	short chain dehydrogenase; Provisional	99.79
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.79
PRK06180	277	short chain dehydrogenase; Provisional	99.79
PRK06179	270	short chain dehydrogenase; Provisional	99.79
PRK06138	252	short chain dehydrogenase; Provisional	99.79
PRK06483	236	dihydromonapterin reductase; Provisional	99.78
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.78
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.78
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.78
PRK09072	263	short chain dehydrogenase; Provisional	99.78
PRK10538	248	malonic semialdehyde reductase; Provisional	99.78
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.78
PRK08251	248	short chain dehydrogenase; Provisional	99.78
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.78
PRK12939	250	short chain dehydrogenase; Provisional	99.78
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.78
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.78
PRK08263	275	short chain dehydrogenase; Provisional	99.77
PRK05875	276	short chain dehydrogenase; Provisional	99.77
PRK08226	263	short chain dehydrogenase; Provisional	99.77
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.77
PRK06123	248	short chain dehydrogenase; Provisional	99.77
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.77
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.77
PRK06197	306	short chain dehydrogenase; Provisional	99.77
PRK06701	290	short chain dehydrogenase; Provisional	99.77
PRK05717	255	oxidoreductase; Validated	99.76
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.76
PRK07067	257	sorbitol dehydrogenase; Provisional	99.76
PRK06940	275	short chain dehydrogenase; Provisional	99.76
PRK07201	657	short chain dehydrogenase; Provisional	99.76
PRK06949	258	short chain dehydrogenase; Provisional	99.76
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.76
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.76
PRK06914	280	short chain dehydrogenase; Provisional	99.76
PRK07102	243	short chain dehydrogenase; Provisional	99.75
PRK07775	274	short chain dehydrogenase; Provisional	99.75
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.75
PRK08628	258	short chain dehydrogenase; Provisional	99.75
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.75
PRK06841	255	short chain dehydrogenase; Provisional	99.75
PRK06523	260	short chain dehydrogenase; Provisional	99.75
PRK05884	223	short chain dehydrogenase; Provisional	99.75
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.74
PRK06196	315	oxidoreductase; Provisional	99.74
PRK06198	260	short chain dehydrogenase; Provisional	99.74
PRK05693	274	short chain dehydrogenase; Provisional	99.74
PRK06482	276	short chain dehydrogenase; Provisional	99.74
PRK09134	258	short chain dehydrogenase; Provisional	99.74
PRK07856	252	short chain dehydrogenase; Provisional	99.74
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.73
PRK12744	257	short chain dehydrogenase; Provisional	99.73
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.73
PRK06181	263	short chain dehydrogenase; Provisional	99.73
PRK12937	245	short chain dehydrogenase; Provisional	99.73
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK06500	249	short chain dehydrogenase; Provisional	99.73
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.73
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.72
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.72
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.72
PRK06057	255	short chain dehydrogenase; Provisional	99.72
PRK07074	257	short chain dehydrogenase; Provisional	99.72
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.72
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK07326	237	short chain dehydrogenase; Provisional	99.71
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
PRK12746	254	short chain dehydrogenase; Provisional	99.71
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.7
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.7
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.69
PRK08324	681	short chain dehydrogenase; Validated	99.68
PRK06924	251	short chain dehydrogenase; Provisional	99.68
PRK12827	249	short chain dehydrogenase; Provisional	99.68
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK12828	239	short chain dehydrogenase; Provisional	99.67
PRK06101	240	short chain dehydrogenase; Provisional	99.67
COG1028	251	FabG Dehydrogenases with different specificities (	99.67
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.67
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK07023	243	short chain dehydrogenase; Provisional	99.66
PRK12829	264	short chain dehydrogenase; Provisional	99.66
PRK07041	230	short chain dehydrogenase; Provisional	99.66
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
PRK09291	257	short chain dehydrogenase; Provisional	99.65
PRK09135	249	pteridine reductase; Provisional	99.63
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.63
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.63
PRK07577	234	short chain dehydrogenase; Provisional	99.6
PRK07578	199	short chain dehydrogenase; Provisional	99.6
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.59
PRK08017	256	oxidoreductase; Provisional	99.58
PRK07060	245	short chain dehydrogenase; Provisional	99.58
PRK08177	225	short chain dehydrogenase; Provisional	99.58
PRK08264	238	short chain dehydrogenase; Validated	99.58
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
PRK06953	222	short chain dehydrogenase; Provisional	99.56
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.56
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.56
PRK12742	237	oxidoreductase; Provisional	99.56
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.55
PRK07806	248	short chain dehydrogenase; Provisional	99.54
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.53
PRK06720	169	hypothetical protein; Provisional	99.53
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.53
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.5
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.46
PRK12367	245	short chain dehydrogenase; Provisional	99.44
PRK08219	227	short chain dehydrogenase; Provisional	99.39
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.32
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.15
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.12
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	98.96
PLN03209	576	translocon at the inner envelope of chloroplast su	98.84
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.8
PLN02896	353	cinnamyl-alcohol dehydrogenase	98.73
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	98.71
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	98.69
PLN02583	297	cinnamoyl-CoA reductase	98.69
PLN02653	340	GDP-mannose 4,6-dehydratase	98.53
PLN02214	342	cinnamoyl-CoA reductase	98.47
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	98.46
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	98.44
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	98.42
PRK10675	338	UDP-galactose-4-epimerase; Provisional	98.41
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.4
PLN02572	442	UDP-sulfoquinovose synthase	98.37
PLN02650	351	dihydroflavonol-4-reductase	98.36
PLN00198	338	anthocyanidin reductase; Provisional	98.33
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	98.3
PRK08309	177	short chain dehydrogenase; Provisional	98.3
PLN02240	352	UDP-glucose 4-epimerase	98.28
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.24
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.19
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	98.14
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	98.13
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	98.1
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.08
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	98.07
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	97.99
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	97.93
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	97.92
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	97.89
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	97.88
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	97.78
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	97.77
PLN02427	386	UDP-apiose/xylose synthase	97.65
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.5
PLN02686	367	cinnamoyl-CoA reductase	97.42
CHL00194	317	ycf39 Ycf39; Provisional	97.27
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	97.27
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	97.18
TIGR01746	367	Thioester-redct thioester reductase domain. It has	97.14
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	97.14
PRK05865	854	hypothetical protein; Provisional	97.13
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	97.02
PLN02260	668	probable rhamnose biosynthetic enzyme	96.91
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	96.9
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	96.87
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	96.82
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	96.68
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	96.62
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	96.58
PLN02695	370	GDP-D-mannose-3',5'-epimerase	96.47
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	96.39
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	96.35
PLN02260	668	probable rhamnose biosynthetic enzyme	96.28
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	96.21
PLN02778	298	3,5-epimerase/4-reductase	96.19
PRK07201	657	short chain dehydrogenase; Provisional	96.17
PLN02206	442	UDP-glucuronate decarboxylase	96.11
PLN02166	436	dTDP-glucose 4,6-dehydratase	95.8
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	95.34
PF03808	172	Glyco_tran_WecB: Glycosyl transferase WecB/TagA/Cp	95.17
KOG2733	423	consensus Uncharacterized membrane protein [Functi	95.15
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	95.07
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	94.57
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	94.53
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	94.37
PRK12548	289	shikimate 5-dehydrogenase; Provisional	93.59
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	93.17
PRK12320	699	hypothetical protein; Provisional	93.1
TIGR00696	177	wecB_tagA_cpsF bacterial polymer biosynthesis prot	92.91
COG1922	253	WecG Teichoic acid biosynthesis proteins [Cell env	92.51
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	92.15
PF02310	121	B12-binding: B12 binding domain; InterPro: IPR0061	91.96
PRK03692	243	putative UDP-N-acetyl-D-mannosaminuronic acid tran	91.93
COG0569	225	TrkA K+ transport systems, NAD-binding component [	91.85
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	91.53
PLN02503	605	fatty acyl-CoA reductase 2	91.52
PLN00016	378	RNA-binding protein; Provisional	91.5
PLN02996	491	fatty acyl-CoA reductase	90.39
cd06533	171	Glyco_transf_WecG_TagA The glycosyltransferase Wec	90.14
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	89.59
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	89.44
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	89.4
PF03848	192	TehB: Tellurite resistance protein TehB; InterPro:	89.39
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	88.07
PF04131	192	NanE: Putative N-acetylmannosamine-6-phosphate epi	87.44
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	87.38
cd02067	119	B12-binding B12 binding domain (B12-BD). This doma	86.71
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	86.58
PRK04148	134	hypothetical protein; Provisional	86.34
PRK14968	188	putative methyltransferase; Provisional	86.05
PRK10669	558	putative cation:proton antiport protein; Provision	82.37
COG3320	382	Putative dehydrogenase domain of multifunctional n	82.1

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.96  E-value=1.9e-29  Score=168.62  Aligned_cols=140  Identities=23%  Similarity=0.236  Sum_probs=129.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|++.|++|++++|+.+.++++.+++.+  . .+..+..|++|.++++.+++.+.++|+++|+|   ||.... .++.
T Consensus        23 A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~-~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g-~~~~   98 (246)
T COG4221          23 ARALAEAGAKVVLAARREERLEALADEIGA--G-AALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALG-DPLD   98 (246)
T ss_pred             HHHHHHCCCeEEEEeccHHHHHHHHHhhcc--C-ceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcC-Chhh
Confidence            678999999999999999999999999965  2 58999999999999999999999999999999   898844 8999


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhccC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e~  147 (147)
                      +.+.++|++++++|+.|.++.+++.+|.|.++++|.|||+||++|..++++.      ++++..|++  .||+|+
T Consensus        99 ~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs~--~LR~e~  171 (246)
T COG4221          99 EADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSL--GLRQEL  171 (246)
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHHH--HHHHHh
Confidence            9999999999999999999999999999999999999999999999887654      578889998  899875

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=4.7e-29  Score=171.75  Aligned_cols=144  Identities=22%  Similarity=0.274  Sum_probs=131.3

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCc-eEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDN-VIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +|++|+++|++++++.|....++++.+++++.+... ++++.||++|++++.++++.+.++||++|+|   ||... ...
T Consensus        28 lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~-~~~  106 (282)
T KOG1205|consen   28 LAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISL-VGF  106 (282)
T ss_pred             HHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCcccc-ccc
Confidence            467899999999999999999999989998876555 9999999999999999999999999999999   88875 677


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------CchhhhccccchhhhhccC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e~  147 (147)
                      ....+.+++.+.|++|++|+.+++++++|+|++++.|+||++||++|..+.|      ++++|..+|++  +||.|+
T Consensus       107 ~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~Al~~f~e--tLR~El  181 (282)
T KOG1205|consen  107 LEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKHALEGFFE--TLRQEL  181 (282)
T ss_pred             cccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHHHHHHHHH--HHHHHh
Confidence            8888999999999999999999999999999999889999999999998754      55789999999  999985

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.95  E-value=8.1e-28  Score=164.50  Aligned_cols=144  Identities=18%  Similarity=0.206  Sum_probs=130.8

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.++++++.++++...+..+.++.+|+++++++.++.+++.+..+.||++   ||.. ...++
T Consensus        22 ~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g-~~g~f  100 (265)
T COG0300          22 LAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFG-TFGPF  100 (265)
T ss_pred             HHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcC-Cccch
Confidence            3678999999999999999999999999998765578999999999999999999999998899999   8877 45889


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhccC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e~  147 (147)
                      .+.+.++.++++++|+.++..|+++++|.|.++++|.||||+|.+|..+.|.      +++++.+|+.  +||.|+
T Consensus       101 ~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~fSe--aL~~EL  174 (265)
T COG0300         101 LELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSE--ALREEL  174 (265)
T ss_pred             hhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHHHHHHH--HHHHHh
Confidence            9999999999999999999999999999999999999999999999988654      3467778888  899885

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=3.4e-26  Score=156.81  Aligned_cols=142  Identities=16%  Similarity=0.180  Sum_probs=128.3

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.+++++|+++++.+.+.+..+++.++++..|  ++..+.||++|.+++.+..+++++++|.+|++   ||+. +..++
T Consensus        54 ialefa~rg~~~vl~Din~~~~~etv~~~~~~g--~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~-~~~~l  130 (300)
T KOG1201|consen   54 IALEFAKRGAKLVLWDINKQGNEETVKEIRKIG--EAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIV-TGKKL  130 (300)
T ss_pred             HHHHHHHhCCeEEEEeccccchHHHHHHHHhcC--ceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccc-cCCCc
Confidence            467899999999999999999999999998775  69999999999999999999999999999999   8988 55778


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC------CCchhhhccccchhhhhccC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN------ITNEWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------~~~~~~~~~~~~~~al~~e~  147 (147)
                      .+.+.+++++++++|+.|+++.+|+|+|.|.+.++|.||+|+|++|..+.      .+++.+..+|.+  +|+.|+
T Consensus       131 l~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhe--sL~~EL  204 (300)
T KOG1201|consen  131 LDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAVGFHE--SLSMEL  204 (300)
T ss_pred             cCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHHHHHH--HHHHHH
Confidence            88999999999999999999999999999999999999999999998774      456678888888  777664

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.90  E-value=2.1e-23  Score=135.91  Aligned_cols=140  Identities=20%  Similarity=0.195  Sum_probs=118.4

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      |++.|.+.|-+|++++|+.+.++++.++.     +.++...||+.|.++.+++++.+++.|+.++++   ||+.....-.
T Consensus        21 lak~f~elgN~VIi~gR~e~~L~e~~~~~-----p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt   95 (245)
T COG3967          21 LAKRFLELGNTVIICGRNEERLAEAKAEN-----PEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLT   95 (245)
T ss_pred             HHHHHHHhCCEEEEecCcHHHHHHHHhcC-----cchheeeecccchhhHHHHHHHHHhhCCchheeeecccccchhhcc
Confidence            35678889999999999999888776654     258899999999999999999999999999999   9987442222


Q ss_pred             -hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC------CCchhhhccccchhhhhccC
Q 040927           78 -LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN------ITNEWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        78 -~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------~~~~~~~~~~~~~~al~~e~  147 (147)
                       .+...++.+..+++|+.+|+++++.++|++.++..+.|||+||..+..|.      ...+++++.|+.  +||.++
T Consensus        96 ~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt~--aLR~Ql  170 (245)
T COG3967          96 GAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTL--ALREQL  170 (245)
T ss_pred             CCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHHHH--HHHHHh
Confidence             23446778899999999999999999999999988999999999998874      455688999999  898764

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.90  E-value=8.3e-23  Score=142.00  Aligned_cols=143  Identities=18%  Similarity=0.149  Sum_probs=117.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++....+.++.++.+|++|+++++++++++. ++|++|++   +|.. ...++
T Consensus        24 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g~iD~lv~nag~~-~~~~~  101 (263)
T PRK08339         24 VARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NIGEPDIFFFSTGGP-KPGYF  101 (263)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hhCCCcEEEECCCCC-CCCCc
Confidence            3577899999999999999888888888765433368899999999999999999986 58999998   6765 33667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhccC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e~  147 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||.++..+.+.      .+++...|+.  ++++|+
T Consensus       102 ~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~~l~~--~la~el  175 (263)
T PRK08339        102 MEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVR--TLAKEL  175 (263)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHHHHHH--HHHHHh
Confidence            7889999999999999999999999999998887899999999988766443      2355666666  666653

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.89  E-value=4.9e-23  Score=133.30  Aligned_cols=141  Identities=17%  Similarity=0.156  Sum_probs=119.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      +..|+++|++|++.+++.+..+++...|...+  +...+.||++++.+++..+++..+.+|+++++   ||+.. ...+.
T Consensus        31 a~~la~~Garv~v~dl~~~~A~ata~~L~g~~--~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItr-D~~Ll  107 (256)
T KOG1200|consen   31 AQLLAKKGARVAVADLDSAAAEATAGDLGGYG--DHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITR-DGLLL  107 (256)
T ss_pred             HHHHHhcCcEEEEeecchhhHHHHHhhcCCCC--ccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCcccc-cccee
Confidence            45688999999999999998898888886654  36789999999999999999999999999999   89984 47777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC--CCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhccC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS--DSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRSI  147 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e~  147 (147)
                      .++.++|++.+.+|+.|.|+++|++...|..+  ..++|||+||+.|.++..++.      +.+-.|++  +.+||+
T Consensus       108 rmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvIgftk--taArEl  182 (256)
T KOG1200|consen  108 RMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGVIGFTK--TAAREL  182 (256)
T ss_pred             eccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCceeeeeH--HHHHHH
Confidence            89999999999999999999999999985433  345999999999999866654      44567777  777764

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2e-22  Score=144.06  Aligned_cols=142  Identities=22%  Similarity=0.207  Sum_probs=122.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.++++..+. ++.++.+|++|+++++++++++.+.+|++|++   +|.. ...++.
T Consensus        24 a~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~-~~~~~~  101 (330)
T PRK06139         24 AEAFARRGARLVLAARDEEALQAVAEECRALGA-EVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVG-AVGRFE  101 (330)
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcC-CCCCcc
Confidence            567889999999999999999999888887765 58889999999999999999999988999999   7765 446778


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhccC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e~  147 (147)
                      +.+.++|++.+++|+.+++++++.++|+|.+++.|+||++||..+..+.+..      +++...|++  +|+.|+
T Consensus       102 ~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~~~~~--sL~~El  174 (330)
T PRK06139        102 ETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSE--ALRGEL  174 (330)
T ss_pred             cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHHHHHH--HHHHHh
Confidence            8999999999999999999999999999998888999999998887665443      456666777  777663

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.5e-22  Score=136.82  Aligned_cols=143  Identities=12%  Similarity=-0.064  Sum_probs=119.3

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcC-CccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG-KLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++|+.+.++++.+++...+. ++..+.+|++|+++++++++++.+++| ++|++   +|......+
T Consensus        21 ia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~   99 (227)
T PRK08862         21 ISCHFARLGATLILCDQDQSALKDTYEQCSALTD-NVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSL   99 (227)
T ss_pred             HHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-CeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCc
Confidence            3567899999999999999999998888877665 578899999999999999999999998 99999   664434457


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCc---CCCchhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLK---NITNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~---~~~~~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|.+.+++|+.+++.+++.++|+|.+++ +|+||++||..+..+   +..+++++..|..  +|+.|
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~Y~asKaal~~~~~--~la~e  171 (227)
T PRK08862        100 FDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQDLTGVESSNALVSGFTH--SWAKE  171 (227)
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence            77889999999999999999999999999998654 689999999876543   3344567777777  66665

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.89  E-value=1.4e-22  Score=139.76  Aligned_cols=141  Identities=26%  Similarity=0.260  Sum_probs=121.0

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcC--CccEE---ecCCCcch
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG--KLDIL---GGLPDNWY   75 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~l---ag~~~~~~   75 (147)
                      ||+.|+++|++|++..-+++..+.+..+.+   .++...+..|++++++++++.+.+++..+  .+..+   ||+....+
T Consensus        45 LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g  121 (322)
T KOG1610|consen   45 LAKKLDKKGFRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLG  121 (322)
T ss_pred             HHHHHHhcCCEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccC
Confidence            478899999999999887777777666654   23688889999999999999999888763  46666   89777778


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------CchhhhccccchhhhhccC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e~  147 (147)
                      +....+.+++.+.+++|+.|++.+++.++|.+++++ |+|||+||+.|..+.|      .++.++++|++  +||+|+
T Consensus       122 ~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~~g~Y~~SK~aVeaf~D--~lR~EL  196 (322)
T KOG1610|consen  122 PDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPALGPYCVSKFAVEAFSD--SLRREL  196 (322)
T ss_pred             ccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCcccccchhhHHHHHHHHH--HHHHHH
Confidence            899999999999999999999999999999998875 9999999999987654      45678999999  999996

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4e-22  Score=137.74  Aligned_cols=143  Identities=15%  Similarity=0.084  Sum_probs=118.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.++++++.+++...+. ++.++.||++|+++++++++++.++++++|++   +|......++
T Consensus        22 ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~  100 (254)
T PRK07478         22 AAKLFAREGAKVVVGARRQAELDQLVAEIRAEGG-EAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPV  100 (254)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCh
Confidence            3577889999999999999888888888877665 68899999999999999999999999999999   7765444677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC-CcCC------Cchhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK-LKNI------TNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~------~~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|++.+.++||++||..+. .+.+      .++++...+..  ++++|
T Consensus       101 ~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  174 (254)
T PRK07478        101 AEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQ--VLAAE  174 (254)
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence            78899999999999999999999999999988878999999998775 2322      23445555655  55554

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=8e-22  Score=137.81  Aligned_cols=140  Identities=18%  Similarity=0.145  Sum_probs=109.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHh-cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKN-SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---   73 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---   73 (147)
                      +++.|+++|++|++++|+.. .++..+++.. .+. . ..+.||++|+++++++++++.+++|++|++   ||...+   
T Consensus        23 iA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~   99 (274)
T PRK08415         23 IAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEAL   99 (274)
T ss_pred             HHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccc
Confidence            36778899999999999853 2233334332 233 3 678899999999999999999999999999   776422   


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------CchhhhccccchhhhhccC
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e~  147 (147)
                      ..++.+.+.++|++.+++|+.+++++++.++|.|.+  +|+||++||.++..+.+      .++++...|+.  +|++|+
T Consensus       100 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~el  175 (274)
T PRK08415        100 EGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVMGVAKAALESSVR--YLAVDL  175 (274)
T ss_pred             ccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhhhhHHHHHHHHHH--HHHHHh
Confidence            256778899999999999999999999999999975  38999999988876543      34566777777  666653

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1e-21  Score=137.30  Aligned_cols=142  Identities=18%  Similarity=0.150  Sum_probs=118.5

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|++++.++++++.+.+|++|++   ||.. ...++
T Consensus        22 la~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~-~~~~~   99 (275)
T PRK05876         22 TGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGF-DVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIV-VGGPI   99 (275)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCc
Confidence            3577889999999999999888888888876654 58889999999999999999999999999999   7765 34677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|.+++ +|+||++||.++..+.++.      +.+...|+.  +|+.|
T Consensus       100 ~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~l~~e  173 (275)
T PRK05876        100 VEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAE--TLARE  173 (275)
T ss_pred             ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            7899999999999999999999999999997665 6899999999888765443      344455565  56554

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.7e-21  Score=135.37  Aligned_cols=142  Identities=19%  Similarity=0.154  Sum_probs=117.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+++++..+++....+ .++..+.+|++|+++++++++++.+.++++|++   +|.. ...++
T Consensus        25 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~-~~~~~  103 (265)
T PRK07062         25 VELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQG-RVSTF  103 (265)
T ss_pred             HHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCh
Confidence            567889999999999999888888888766532 257889999999999999999999999999998   7765 34677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|++.+.|+||++||..+..+.+..      +++...++.  +++.|
T Consensus       104 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaal~~~~~--~la~e  176 (265)
T PRK07062        104 ADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVK--SLATE  176 (265)
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHHHHHHHH--HHHHH
Confidence            78899999999999999999999999999998877999999999887765433      344555555  55554

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.1e-21  Score=136.00  Aligned_cols=141  Identities=23%  Similarity=0.199  Sum_probs=117.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHh--cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKN--SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+.+.+++..+++..  .+. ++.++.||++|++++..+++++.+.++++|++   +|... ..+
T Consensus        24 a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~  101 (260)
T PRK07063         24 ARAFAREGAAVALADLDAALAERAAAAIARDVAGA-RVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINV-FAD  101 (260)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCc-eEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCC-CCC
Confidence            567889999999999999888888888876  333 58899999999999999999999999999999   77652 345


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.++      ++++...++.  ++++|
T Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e  175 (260)
T PRK07063        102 PLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTR--ALGIE  175 (260)
T ss_pred             hhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            56788899999999999999999999999998877789999999887765443      3455666666  56554

>PRK08589 short chain dehydrogenase; Validated

Probab=99.87  E-value=1.2e-21  Score=136.81  Aligned_cols=141  Identities=18%  Similarity=0.223  Sum_probs=116.3

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+ +.++++.+++...+. ++..+.||+++++++..+++++.+.+|++|++   +|......++
T Consensus        22 ia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~   99 (272)
T PRK08589         22 SAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGG-KAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRI   99 (272)
T ss_pred             HHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCC-eEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCc
Confidence            356788999999999999 778888888876654 68899999999999999999999999999999   7765334567


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++.+++.++|+|.+++ |+||++||..+..+.+.      ++.+...|+.  ++++|
T Consensus       100 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~e  171 (272)
T PRK08589        100 HEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTK--SIAIE  171 (272)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            7888999999999999999999999999998765 89999999888765433      3345566665  55554

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.87  E-value=1.7e-21  Score=135.94  Aligned_cols=139  Identities=17%  Similarity=0.120  Sum_probs=108.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHH-hcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLK-NSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---   73 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---   73 (147)
                      +++.|+++|++|++++|+....++ .+++. ..+.  ...+.+|++|+++++++++++.+++|++|++   ||....   
T Consensus        25 iA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~--~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~  101 (271)
T PRK06505         25 IAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGS--DFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNEL  101 (271)
T ss_pred             HHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCC--ceEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccc
Confidence            367899999999999998643333 33332 2232  3578999999999999999999999999999   776422   


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e  146 (147)
                      ..++.+.+.++|++.+++|+.+++++++.++|+|.+  +|+||++||.++..+.+      .++++...|+.  +|++|
T Consensus       102 ~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaAl~~l~r--~la~e  176 (271)
T PRK06505        102 KGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVR--YLAAD  176 (271)
T ss_pred             cCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhhhhHHHHHHHHH--HHHHH
Confidence            146778899999999999999999999999999974  48999999988765543      34566777777  66665

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.87  E-value=1.2e-21  Score=127.37  Aligned_cols=138  Identities=25%  Similarity=0.308  Sum_probs=118.3

Q ss_pred             ccccccCCc-EEEEeecC--hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927            2 KRSNQVHYS-MGEATTKD--EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         2 ~~~l~~~G~-~v~l~~r~--~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~   75 (147)
                      ++.|+++|+ .|++++|+  .+..+++..++...+. ++.++.||++++++++++++++.+.++++|++   +|... ..
T Consensus        17 a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~   94 (167)
T PF00106_consen   17 ARALARRGARVVILTSRSEDSEGAQELIQELKAPGA-KITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFS-DG   94 (167)
T ss_dssp             HHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTS-EEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTT-SB
T ss_pred             HHHHHhcCceEEEEeeeccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccc-cc
Confidence            567788854 68999998  6778888888887774 79999999999999999999999999999999   77764 68


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhccC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRSI  147 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e~  147 (147)
                      ++.+++.++|++.+++|+.+++++.+.++|    ++.|.||++||.++..|.+...      ++...|..  +|++|+
T Consensus        95 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~--~la~e~  166 (167)
T PF00106_consen   95 SLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQ--SLAAEL  166 (167)
T ss_dssp             SGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHH--HHHHHH
T ss_pred             ccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHHHHHHHH--HHHHhc
Confidence            888899999999999999999999999999    3469999999999998876653      56677777  788774

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.7e-21  Score=138.59  Aligned_cols=141  Identities=15%  Similarity=0.121  Sum_probs=120.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++.+.+++|++|++   +|.. ...++.
T Consensus        25 a~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~-~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~-~~~~~~  102 (334)
T PRK07109         25 ARAFARRGAKVVLLARGEEGLEALAAEIRAAGG-EALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVT-VFGPFE  102 (334)
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcC-CCCchh
Confidence            567889999999999999988888888887765 68899999999999999999999999999998   6655 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|+|.+++.|+||++||..+..+.+..      +++...|++  +++.|
T Consensus       103 ~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~l~~e  174 (334)
T PRK07109        103 DVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTD--SLRCE  174 (334)
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999998877999999999887665433      345566666  66655

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.2e-21  Score=137.45  Aligned_cols=142  Identities=14%  Similarity=0.051  Sum_probs=112.3

Q ss_pred             ccccccCCcEEEEeecCh----------hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---e
Q 040927            2 KRSNQVHYSMGEATTKDE----------KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---G   68 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---a   68 (147)
                      ++.|++.|++|++++|+.          +.++++.+++...+. ++.++.||++|+++++++++++.+++|++|++   +
T Consensus        25 a~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA  103 (305)
T PRK08303         25 AVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGG-RGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDI  103 (305)
T ss_pred             HHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECC
Confidence            577899999999999973          455666677766554 57889999999999999999999999999999   6


Q ss_pred             -cCC---CcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC---------cCCCchhhhc
Q 040927           69 -GLP---DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL---------KNITNEWAKG  135 (147)
Q Consensus        69 -g~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---------~~~~~~~~~~  135 (147)
                       |..   ....++.+.+.++|++.+++|+.+++.+++.++|.|.++++|+||++||..+..         .|..++++..
T Consensus       104 ~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~  183 (305)
T PRK08303        104 WGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATHYRLSVFYDLAKTSVN  183 (305)
T ss_pred             cccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcCCCCcchhHHHHHHHH
Confidence             642   112567778899999999999999999999999999877679999999976532         1233345666


Q ss_pred             cccchhhhhcc
Q 040927          136 VLSDWMRCRRS  146 (147)
Q Consensus       136 ~~~~~~al~~e  146 (147)
                      .|+.  +|+.|
T Consensus       184 ~lt~--~La~e  192 (305)
T PRK08303        184 RLAF--SLAHE  192 (305)
T ss_pred             HHHH--HHHHH
Confidence            6666  56555

>PRK05599 hypothetical protein; Provisional

Probab=99.87  E-value=4.1e-21  Score=132.32  Aligned_cols=141  Identities=15%  Similarity=0.091  Sum_probs=114.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+ +|++|++++|+.+.++++.+++++.+..++.++.||++|+++++++++++.+.+|++|++   +|.... .+..
T Consensus        17 a~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~-~~~~   94 (246)
T PRK05599         17 ATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGD-QERA   94 (246)
T ss_pred             HHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCC-chhh
Confidence            56677 599999999999999999999887665347889999999999999999999999999999   776533 3445


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.+++.+.+++|+.+++.+++.++|.|.+++ +|+||++||.++..+.+.      ++++...|+.  +|+.|
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  167 (246)
T PRK05599         95 ETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQ--GLADS  167 (246)
T ss_pred             hcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHHHHH--HHHHH
Confidence            667778889999999999999999999997664 689999999988776433      3455666666  66655

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=3.3e-21  Score=133.77  Aligned_cols=140  Identities=16%  Similarity=0.095  Sum_probs=108.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---ch
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---WY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~~   75 (147)
                      ++.|+++|++|++++|+. ..++..+++....+ ....+.||++|+++++++++.+.+++|++|++   +|....   ..
T Consensus        27 a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~  104 (260)
T PRK06603         27 AQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIG-CNFVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKG  104 (260)
T ss_pred             HHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcC-CceEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccC
Confidence            567889999999999874 34444555544322 23467899999999999999999999999999   565321   24


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------CchhhhccccchhhhhccC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e~  147 (147)
                      ++.+.+.++|++.+++|+.+++.+++.++|.|.+  +|+|||+||..+..+.+      .++++...|+.  +|++|+
T Consensus       105 ~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~el  178 (260)
T PRK06603        105 RYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVK--YLANDM  178 (260)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchhhHHHHHHHHHH--HHHHHh
Confidence            6778899999999999999999999999999964  48999999988765543      34566677777  666653

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=2.5e-21  Score=133.78  Aligned_cols=138  Identities=13%  Similarity=0.048  Sum_probs=110.1

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---c
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---W   74 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~   74 (147)
                      +++.|+++|++|++++|+. ..++..+++.  + .++..+.||++|+++++++++++.+++|++|++   ||...+   .
T Consensus        25 ~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~  100 (252)
T PRK06079         25 CAQAIKDQGATVIYTYQND-RMKKSLQKLV--D-EEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELG  100 (252)
T ss_pred             HHHHHHHCCCEEEEecCch-HHHHHHHhhc--c-CceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEccccccccccc
Confidence            3678899999999999984 4444444443  2 257889999999999999999999999999999   775432   2


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      .++.+.+.++|+..+++|+.+++++++.++|+|.+  +|+||++||..+..+.+.      ++++...|+.  +|+.|
T Consensus       101 ~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~--~la~e  174 (252)
T PRK06079        101 GNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIAKAALESSVR--YLARD  174 (252)
T ss_pred             CCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhHHHHHHHHHHHH--HHHHH
Confidence            56778899999999999999999999999999964  489999999888765443      3456667766  66665

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.1e-21  Score=135.62  Aligned_cols=141  Identities=16%  Similarity=0.136  Sum_probs=115.4

Q ss_pred             ccccccCCcEEEEeecCh---------hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ec
Q 040927            2 KRSNQVHYSMGEATTKDE---------KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GG   69 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag   69 (147)
                      ++.|++.|++|++++++.         +.++++.+++...+. ++.++.+|++|++++.++++++.+.+|++|++   ||
T Consensus        23 a~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG  101 (286)
T PRK07791         23 ALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGG-EAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAG  101 (286)
T ss_pred             HHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCC-ceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            567889999999998875         677778888876665 58889999999999999999999999999999   77


Q ss_pred             CCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC------CCeEEEEcCCCCCCcCCC------chhhhccc
Q 040927           70 LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD------SPRIVNASSSMGKLKNIT------NEWAKGVL  137 (147)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~isS~~~~~~~~~------~~~~~~~~  137 (147)
                      .. ...++.+.+.++|++.+++|+.+++++++.++|+|.+..      .|+||++||.++..+.+.      ++++...+
T Consensus       102 ~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  180 (286)
T PRK07791        102 IL-RDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAAL  180 (286)
T ss_pred             CC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCCCchhhHHHHHHHHHH
Confidence            65 335677889999999999999999999999999997532      379999999988776543      33555666


Q ss_pred             cchhhhhcc
Q 040927          138 SDWMRCRRS  146 (147)
Q Consensus       138 ~~~~al~~e  146 (147)
                      ..  +++.|
T Consensus       181 ~~--~la~e  187 (286)
T PRK07791        181 TL--VAAAE  187 (286)
T ss_pred             HH--HHHHH
Confidence            66  55554

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.6e-21  Score=133.62  Aligned_cols=142  Identities=18%  Similarity=0.144  Sum_probs=116.1

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++...+. ++..+.+|++|++++.++++++.+.+|++|++   +|.. ...++
T Consensus        25 ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~-~~~~~  102 (253)
T PRK05867         25 VALAYVEAGAQVAIAARHLDALEKLADEIGTSGG-KVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGII-TVTPM  102 (253)
T ss_pred             HHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCCh
Confidence            3567889999999999999888888888877664 68889999999999999999999999999999   6665 33567


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcC--------CCchhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKN--------ITNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~--------~~~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|.+++ +|+||++||..+..+.        ..++++...++.  ++++|
T Consensus       103 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal~~~~~--~la~e  178 (253)
T PRK05867        103 LDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTK--AMAVE  178 (253)
T ss_pred             hhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHHHHHHHHH--HHHHH
Confidence            7889999999999999999999999999997654 4789999998765422        222345556665  55554

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.86  E-value=3.1e-21  Score=133.76  Aligned_cols=142  Identities=18%  Similarity=0.149  Sum_probs=112.2

Q ss_pred             CccccccCCcEEEEeecChh--hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc--
Q 040927            1 MKRSNQVHYSMGEATTKDEK--RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN--   73 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~--   73 (147)
                      +++.|+++|++|++++|+.+  ..++..+++...+. ++.++.+|++|+++++++++++.+++|++|++   +|....  
T Consensus        24 ia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~  102 (258)
T PRK07370         24 IAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLN-PSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEE  102 (258)
T ss_pred             HHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccC-cceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCccc
Confidence            36788999999999876543  34555666655543 46788999999999999999999999999999   775421  


Q ss_pred             -chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           74 -WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        74 -~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                       ..++.+.+.++|++.+++|+.+++++++.++|.|.+  +|+||++||..+..+.+.      ++++...++.  +|+.|
T Consensus       103 ~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~e  178 (258)
T PRK07370        103 LIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVR--YLAAE  178 (258)
T ss_pred             ccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccchhhHHHHHHHHHHH--HHHHH
Confidence             256778899999999999999999999999999975  489999999888765443      3456666766  66665


Q ss_pred             C
Q 040927          147 I  147 (147)
Q Consensus       147 ~  147 (147)
                      +
T Consensus       179 l  179 (258)
T PRK07370        179 L  179 (258)
T ss_pred             h
Confidence            3

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.3e-21  Score=131.36  Aligned_cols=141  Identities=12%  Similarity=0.032  Sum_probs=115.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   +|.. ...++.
T Consensus        18 a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~-~~~~~~   95 (252)
T PRK07677         18 AKRFAEEGANVVITGRTKEKLEEAKLEIEQFPG-QVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGN-FICPAE   95 (252)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCC-CCCCcc
Confidence            567888999999999998888888777766554 68899999999999999999999999999998   6654 235667


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++++++|+.++++++++++|+|.+. .+|+||++||..+..+.+.      ++.+...|..  +|++|
T Consensus        96 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e  168 (252)
T PRK07677         96 DLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTR--TLAVE  168 (252)
T ss_pred             cCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence            88999999999999999999999999998654 3589999999988765332      3455566666  55554

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=4.9e-21  Score=132.73  Aligned_cols=139  Identities=12%  Similarity=0.034  Sum_probs=109.2

Q ss_pred             CccccccCCcEEEEeecCh---hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc-
Q 040927            1 MKRSNQVHYSMGEATTKDE---KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN-   73 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~-   73 (147)
                      +++.|+++|++|++++|+.   +.++++.+++.  +. ++..+.+|++|+++++++++++.+++|++|++   +|.... 
T Consensus        25 ia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~  101 (257)
T PRK08594         25 IARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQ-ESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKE  101 (257)
T ss_pred             HHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CC-ceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCC
Confidence            3678999999999998753   34444444442  32 58889999999999999999999999999999   665421 


Q ss_pred             --chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhc
Q 040927           74 --WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRR  145 (147)
Q Consensus        74 --~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~  145 (147)
                        ..++.+.+.++|+..+++|+.+++.+++.++|+|.+  +|+|||+||..+..+.+.      ++++...|+.  +|++
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~  177 (257)
T PRK08594        102 DLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQNYNVMGVAKASLEASVK--YLAN  177 (257)
T ss_pred             cCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCCCchhHHHHHHHHHHHH--HHHH
Confidence              246678899999999999999999999999999965  489999999988765433      3456667766  6665


Q ss_pred             c
Q 040927          146 S  146 (147)
Q Consensus       146 e  146 (147)
                      |
T Consensus       178 e  178 (257)
T PRK08594        178 D  178 (257)
T ss_pred             H
Confidence            5

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.86  E-value=1.1e-20  Score=131.42  Aligned_cols=144  Identities=25%  Similarity=0.227  Sum_probs=118.8

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCC--CceEEEEecCCCHHHHHHHHHHHHhh-cCCccEE---ecCCCcc
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC--DNVIFHLLDVTDPASVDSLVHFVSSQ-FGKLDIL---GGLPDNW   74 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id~l---ag~~~~~   74 (147)
                      +|+.|++.|++|++++|+.+.++++..++...+.  .++..+.||++++++++++++...++ +|++|++   +|.....
T Consensus        24 ia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~  103 (270)
T KOG0725|consen   24 IALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLT  103 (270)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCC
Confidence            3678999999999999999999998888776443  35889999999999999999999999 6999999   7776554


Q ss_pred             hhhhcccHHHHHHhHHHhhh-hHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC-------chhhhccccchhhhhcc
Q 040927           75 YKMLTQTYELAEKCIQTNYY-GNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT-------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-------~~~~~~~~~~~~al~~e  146 (147)
                      .++.+++.++|++++++|+. +.+.+.+.+.|++.++++|.|+++||..+..+.++       +++++..++.  +++.|
T Consensus       104 ~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~~sK~al~~ltr--~lA~E  181 (270)
T KOG0725|consen  104 GSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAYGVSKAALLQLTR--SLAKE  181 (270)
T ss_pred             CChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccchhHHHHHHHHHH--HHHHH
Confidence            57889999999999999999 57788888888888888899999999988755333       3456666666  44443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.85  E-value=5.1e-21  Score=132.19  Aligned_cols=140  Identities=16%  Similarity=0.107  Sum_probs=110.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+..  ++..++++..+. ++.++.+|++|+++++++++++.+.+|++|++   +|.. ...++
T Consensus        24 ia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~-~~~~~   99 (251)
T PRK12481         24 MAIGLAKAGADIVGVGVAEA--PETQAQVEALGR-KFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGII-RRQDL   99 (251)
T ss_pred             HHHHHHHCCCEEEEecCchH--HHHHHHHHHcCC-eEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCc
Confidence            35678999999999988642  344455555554 68899999999999999999999999999999   7765 33567


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|.+++ +|+||++||..+..+.+      .++++...+..  +++.|
T Consensus       100 ~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~l~~--~la~e  173 (251)
T PRK12481        100 LEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTR--ALATE  173 (251)
T ss_pred             ccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence            7889999999999999999999999999997654 58999999988766543      33455566665  55544

>PLN00015 protochlorophyllide reductase

Probab=99.85  E-value=1.1e-20  Score=134.17  Aligned_cols=124  Identities=20%  Similarity=0.073  Sum_probs=104.8

Q ss_pred             CccccccCC-cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHY-SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G-~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++| ++|++++|+.+.++++.+++...+. ++.++.+|++|.++++++++++.+.++++|++   ||......+
T Consensus        13 ia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~   91 (308)
T PLN00015         13 TAKALAETGKWHVVMACRDFLKAERAAKSAGMPKD-SYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAK   91 (308)
T ss_pred             HHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCC-eEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCC
Confidence            367888999 9999999998888887777754333 57888999999999999999999888999999   776533334


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--CCeEEEEcCCCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--SPRIVNASSSMGKL  125 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~  125 (147)
                      +.+.+.++|++++++|+.|++.+++.++|.|.+++  +|+||++||..+..
T Consensus        92 ~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~  142 (308)
T PLN00015         92 EPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNT  142 (308)
T ss_pred             cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecccccc
Confidence            55778899999999999999999999999998775  58999999987753

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=1.2e-20  Score=130.97  Aligned_cols=141  Identities=11%  Similarity=-0.007  Sum_probs=107.4

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc---
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW---   74 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~---   74 (147)
                      +++.|+++|++|++++|+. ..++..+++....+ ....+.||++|+++++++++++.+++|++|++   ||.....   
T Consensus        24 ~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~  101 (261)
T PRK08690         24 IAKACREQGAELAFTYVVD-KLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALS  101 (261)
T ss_pred             HHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccc
Confidence            3678899999999998864 34444555544333 35678999999999999999999999999999   7765321   


Q ss_pred             h-hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           75 Y-KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 ~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      . .+.+.+.++|+..+++|+.+++++++.++|.|+++ +|+||++||..+..+.+.      ++++...|+.  ++++|
T Consensus       102 ~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~--~la~e  177 (261)
T PRK08690        102 GDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIR--FTAAC  177 (261)
T ss_pred             cchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccchhHHHHHHHHHH--HHHHH
Confidence            1 24567889999999999999999999999999755 489999999888765433      3455566655  55544

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=1.2e-20  Score=131.70  Aligned_cols=140  Identities=15%  Similarity=0.090  Sum_probs=107.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---c
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---W   74 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~   74 (147)
                      +++.|+++|++|++++|+.. ..+..+++....+ ....+.+|++|+++++++++++.+++|++|++   ||...+   .
T Consensus        28 ia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~  105 (272)
T PRK08159         28 IAKACRAAGAELAFTYQGDA-LKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELT  105 (272)
T ss_pred             HHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccc
Confidence            36788999999999988732 2223333332222 35678999999999999999999999999999   776532   2


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e  146 (147)
                      .++.+.+.++|++.+++|+.+++.+++.++|+|.+  +|+||++||.++..+.+      .++++...|+.  +|+.|
T Consensus       106 ~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y~asKaal~~l~~--~la~e  179 (272)
T PRK08159        106 GRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVMGVAKAALEASVK--YLAVD  179 (272)
T ss_pred             cCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhhhhHHHHHHHHHH--HHHHH
Confidence            46678899999999999999999999999999964  48999999988765543      34456667766  66655

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=1.6e-20  Score=130.20  Aligned_cols=139  Identities=17%  Similarity=0.106  Sum_probs=107.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---ch
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---WY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~~   75 (147)
                      ++.|+++|++|++++|+....+ ..+++..... ...++.||++|+++++++++.+.+++|++|++   ||....   ..
T Consensus        29 a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~  106 (258)
T PRK07533         29 ARAFRALGAELAVTYLNDKARP-YVEPLAEELD-APIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHG  106 (258)
T ss_pred             HHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhc-cceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccC
Confidence            5678999999999999864322 2233332222 35678999999999999999999999999999   776422   24


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e  146 (147)
                      ++.+.+.++|++.+++|+.+++++++.++|.|++  +|+||++||..+..+.+      .++++...|+.  +|+.|
T Consensus       107 ~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~--~la~e  179 (258)
T PRK07533        107 RVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYNLMGPVKAALESSVR--YLAAE  179 (258)
T ss_pred             CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccchhhHHHHHHHHHHHH--HHHHH
Confidence            6678899999999999999999999999999964  48999999988765533      33456666666  66655

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=2.1e-20  Score=129.38  Aligned_cols=142  Identities=17%  Similarity=0.082  Sum_probs=113.5

Q ss_pred             CccccccCCcEEEEeecC-----------hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--
Q 040927            1 MKRSNQVHYSMGEATTKD-----------EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--   67 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--   67 (147)
                      +++.|+++|++|++++++           .+..++..+++...+. ++.++.+|++|++++.++++++.+.+|++|++  
T Consensus        24 ~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~  102 (256)
T PRK12859         24 ICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGV-KVSSMELDLTQNDAPKELLNKVTEQLGYPHILVN  102 (256)
T ss_pred             HHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence            367889999999987532           2334455566666664 68899999999999999999999999999998  


Q ss_pred             -ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccch
Q 040927           68 -GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDW  140 (147)
Q Consensus        68 -ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~  140 (147)
                       +|.. ...++.+.+.++|++.+++|+.+++.+.+.++|.|.+++.|+||++||..+..+.++      ++++...|.+ 
T Consensus       103 ~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~-  180 (256)
T PRK12859        103 NAAYS-TNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDALTS-  180 (256)
T ss_pred             CCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCCCchHHHHHHHHHHHHHH-
Confidence             6665 336778899999999999999999999999999998877799999999998776544      2345566665 


Q ss_pred             hhhhcc
Q 040927          141 MRCRRS  146 (147)
Q Consensus       141 ~al~~e  146 (147)
                       ++++|
T Consensus       181 -~la~~  185 (256)
T PRK12859        181 -SLAAE  185 (256)
T ss_pred             -HHHHH
Confidence             55554

>PRK05855 short chain dehydrogenase; Validated

Probab=99.85  E-value=1.1e-20  Score=143.64  Aligned_cols=142  Identities=18%  Similarity=0.183  Sum_probs=120.2

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.++++..+. ++.++.||++|++++.++++++.+.+|++|++   ||.. ...++
T Consensus       331 ~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~  408 (582)
T PRK05855        331 TALAFAREGAEVVASDIDEAAAERTAELIRAAGA-VAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIG-MAGGF  408 (582)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccC-CCCCc
Confidence            3577899999999999999888888888877765 68999999999999999999999999999999   7775 34667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++++++|+.|++.+++.++|.|.+++ +|+||++||.++..+.++      ++++...++.  +|++|
T Consensus       409 ~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~--~l~~e  482 (582)
T PRK05855        409 LDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSE--CLRAE  482 (582)
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHHHHHH--HHHHH
Confidence            7889999999999999999999999999998765 489999999988766443      3345566666  66655

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=1.5e-20  Score=130.51  Aligned_cols=140  Identities=11%  Similarity=0.023  Sum_probs=103.9

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc---
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW---   74 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~---   74 (147)
                      +++.|+++|++|++++|.... ++..+++....+ ....+.||++|+++++++++.+.+++|++|++   ||.....   
T Consensus        24 ~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~  101 (260)
T PRK06997         24 IAKACKREGAELAFTYVGDRF-KDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIA  101 (260)
T ss_pred             HHHHHHHCCCeEEEEccchHH-HHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccc
Confidence            367788999999998764221 222233322222 23568899999999999999999999999999   7764221   


Q ss_pred             hh-hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           75 YK-MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 ~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      .+ +.+.+.++|++.+++|+.+++++++.++|+|.+  +|+||++||..+..+.+.      ++++...++.  +|++|
T Consensus       102 ~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~--~la~e  176 (260)
T PRK06997        102 GDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVVPNYNTMGLAKASLEASVR--YLAVS  176 (260)
T ss_pred             cccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCCcchHHHHHHHHHHHHH--HHHHH
Confidence            12 345788999999999999999999999999953  489999999888765443      3456667776  66655

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=2.2e-20  Score=129.80  Aligned_cols=140  Identities=14%  Similarity=0.014  Sum_probs=108.4

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc---
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW---   74 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~---   74 (147)
                      +++.|+++|++|++++|+ +.+++..+++....+ ....+.||++|+++++++++++.+.+|++|++   ||.....   
T Consensus        24 ia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~  101 (262)
T PRK07984         24 IAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLG-SDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLD  101 (262)
T ss_pred             HHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccC-CceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccC
Confidence            367789999999999987 345555666655443 46788999999999999999999999999999   7754221   


Q ss_pred             -hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           75 -YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 -~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                       .++.+.+.++|++.+++|+.+++.+++.++|.|.+  +|+||++||..+..+.+.      ++.+...|+.  +++.|
T Consensus       102 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~--~la~e  176 (262)
T PRK07984        102 GDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVR--YMANA  176 (262)
T ss_pred             CcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence             12556788999999999999999999999997653  489999999887665433      3456666666  66655

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.3e-20  Score=130.29  Aligned_cols=125  Identities=18%  Similarity=0.124  Sum_probs=106.9

Q ss_pred             CccccccCCcEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++|+.+ .++++.+++...+. ++..+.+|++|++++.++++++.+.++++|++   +|... ..+
T Consensus        24 ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~  101 (254)
T PRK06114         24 IAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGR-RAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIAN-ANP  101 (254)
T ss_pred             HHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCC
Confidence            35678899999999999754 45677777776654 58889999999999999999999999999999   77653 356


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                      +.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.
T Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~  152 (254)
T PRK06114        102 AEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN  152 (254)
T ss_pred             hHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC
Confidence            778899999999999999999999999999988878999999998876544

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.85  E-value=7.6e-21  Score=130.54  Aligned_cols=139  Identities=22%  Similarity=0.207  Sum_probs=114.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc-CCccEE---ecCCCc---c
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL---GGLPDN---W   74 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l---ag~~~~---~   74 (147)
                      ++.|+++|++|++++|+.+++++..+++....+.  .++.||++++++++++++++.+.+ |++|++   +|....   .
T Consensus        13 a~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~--~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~   90 (241)
T PF13561_consen   13 ARALAEEGANVILTDRNEEKLADALEELAKEYGA--EVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVE   90 (241)
T ss_dssp             HHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS--EEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTS
T ss_pred             HHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC--ceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCC
Confidence            6788999999999999999877777777765543  369999999999999999999999 999988   665533   3


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                      .++.+.+.++|++.+++|+.+++.+++.++|+|.+.  |+||++||..+..+.+...      ++...++.  ++++|
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r--~lA~e  164 (241)
T PF13561_consen   91 KPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEGLTR--SLAKE  164 (241)
T ss_dssp             SSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHH--HHHHH
T ss_pred             CChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHHHHH--HHHHH
Confidence            678889999999999999999999999999988775  8999999998877765543      44555555  44443

...

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.84  E-value=3.1e-20  Score=128.84  Aligned_cols=143  Identities=10%  Similarity=0.012  Sum_probs=114.9

Q ss_pred             ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-----
Q 040927            2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-----   72 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-----   72 (147)
                      ++.|+++|++|++++| +.+.++++.++++...+.++.++.+|++|+++++++++++.+.++++|++   ||...     
T Consensus        25 a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~  104 (260)
T PRK08416         25 VYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVG  104 (260)
T ss_pred             HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECcccccccccc
Confidence            5678899999998875 56667777777765433368899999999999999999999999999998   66431     


Q ss_pred             cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927           73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e  146 (147)
                      ...++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.|+||++||..+..+.+      .++++...++.  +|++|
T Consensus       105 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  182 (260)
T PRK08416        105 GYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVK--YAATE  182 (260)
T ss_pred             ccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccchhhHHHHHHHHH--HHHHH
Confidence            23566778889999999999999999999999999887778999999988765433      34556666666  66665

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.84  E-value=5.5e-21  Score=131.79  Aligned_cols=141  Identities=14%  Similarity=0.048  Sum_probs=116.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCc--cEE---ecCCC-cch
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKL--DIL---GGLPD-NWY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i--d~l---ag~~~-~~~   75 (147)
                      +++||++|.+|++++|+.++++++.+|+.+.....+.++.+|+++.+.+   .+.+.+....+  -+|   +|... .+.
T Consensus        66 A~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~---ye~i~~~l~~~~VgILVNNvG~~~~~P~  142 (312)
T KOG1014|consen   66 ARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEV---YEKLLEKLAGLDVGILVNNVGMSYDYPE  142 (312)
T ss_pred             HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchh---HHHHHHHhcCCceEEEEecccccCCCcH
Confidence            5789999999999999999999999999987765688999999998773   44444444444  444   77653 467


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhccC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRSI  147 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e~  147 (147)
                      .+.+.+...+++.+++|..++..+++.++|.|.++++|.|||+||.+|..|.|...      .+...|+.  +|++|.
T Consensus       143 ~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~~~S~--~L~~Ey  218 (312)
T KOG1014|consen  143 SFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVDFFSR--CLQKEY  218 (312)
T ss_pred             HHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHHHHHH--HHHHHH
Confidence            88899988999999999999999999999999999999999999999999876443      34556666  777763

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.84  E-value=3.8e-20  Score=128.68  Aligned_cols=141  Identities=18%  Similarity=0.180  Sum_probs=117.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      +++|+++|++|++++|+.+.+++..+.+...+. ++..+.||++|+++++++++++.+.++++|++   +|... ..++.
T Consensus        27 a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~  104 (265)
T PRK07097         27 AKAYAKAGATIVFNDINQELVDKGLAAYRELGI-EAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIK-RIPML  104 (265)
T ss_pred             HHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCC-CCCcc
Confidence            567889999999999999888888888876665 68899999999999999999999999999999   77653 35677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++++++|+.+++.+.+.++|+|.+.+.++||++||..+..+.++.      +.+...++.  ++++|
T Consensus       105 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~l~~--~la~e  176 (265)
T PRK07097        105 EMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTK--NIASE  176 (265)
T ss_pred             cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999988778999999998876654332      344455555  55544

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.7e-20  Score=128.89  Aligned_cols=141  Identities=14%  Similarity=0.112  Sum_probs=113.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+  ++.++.+|++|++++.++++++.+++|++|++   +|.........
T Consensus        19 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~   96 (257)
T PRK07024         19 AREYARQGATLGLVARRTDALQAFAARLPKAA--RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEE   96 (257)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC--eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccc
Confidence            56788999999999999888877777664433  58899999999999999999999999999999   66543222233


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|+..+++|+.|++.+++.++|.|.+++.++||++||.++..+.+..      +.+...|..  +++.|
T Consensus        97 ~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~l~~e  168 (257)
T PRK07024         97 REDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLE--SLRVE  168 (257)
T ss_pred             cCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence            3778999999999999999999999999988888999999999887665433      345555555  55544

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.84  E-value=3.3e-20  Score=128.59  Aligned_cols=142  Identities=17%  Similarity=0.067  Sum_probs=115.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-cchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-NWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-~~~~   76 (147)
                      +++.|+++|++|++++|+.+.+++..+++...+  ++.++.+|++|+++++++++++.+.++++|++   +|... ...+
T Consensus        16 ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~   93 (259)
T PRK08340         16 VARELLKKGARVVISSRNEENLEKALKELKEYG--EVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCM   93 (259)
T ss_pred             HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccc
Confidence            357788999999999999988888888886554  47889999999999999999999999999999   67542 2345


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhc-cCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQ-LSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|.+.+++|+.+++++++.++|.|. +.++|+||++||..+..+.+.      ++++...++.  +|++|
T Consensus        94 ~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~~~--~la~e  168 (259)
T PRK08340         94 LHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAK--GVSRT  168 (259)
T ss_pred             cccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            66788899999999999999999999999886 455689999999988766543      3345566666  55554

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.2e-20  Score=127.56  Aligned_cols=142  Identities=20%  Similarity=0.168  Sum_probs=117.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+++..+++...+. ++.++.+|++|.+++.++++.+.+.+|++|++   +|......++.
T Consensus        24 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  102 (253)
T PRK06172         24 ALAFAREGAKVVVADRDAAGGEETVALIREAGG-EALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLA  102 (253)
T ss_pred             HHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChh
Confidence            567889999999999999888888888876664 68899999999999999999999999999999   66543334567


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+..      +++...|+.  ++++|
T Consensus       103 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e  174 (253)
T PRK06172        103 EGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTK--SAAIE  174 (253)
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999988777899999998887665433      344455555  45444

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.6e-20  Score=127.27  Aligned_cols=143  Identities=15%  Similarity=0.123  Sum_probs=117.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++...+. +...+.+|+++.++++.+++++.+.++++|++   +|......++
T Consensus        24 l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~  102 (252)
T PRK07035         24 IAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGG-KAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHI  102 (252)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCc
Confidence            3567889999999999998888888888876664 57889999999999999999999999999998   6654334566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++.+++.++|+|.+++.++|+++||..+..+.++.      +++...+..  ++++|
T Consensus       103 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~~~~~--~l~~e  175 (252)
T PRK07035        103 LDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTK--AFAKE  175 (252)
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence            77889999999999999999999999999988777999999998877654332      345555555  55544

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.84  E-value=3.8e-20  Score=128.25  Aligned_cols=142  Identities=15%  Similarity=0.125  Sum_probs=114.0

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+. ..++..+++...+. ++.++.+|++|++++.++++++.+.++++|++   ||......++
T Consensus        24 la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~  101 (260)
T PRK12823         24 VALRAAAEGARVVLVDRSE-LVHEVAAELRAAGG-EALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPF  101 (260)
T ss_pred             HHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCC-eEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCCh
Confidence            3567889999999999985 34556666665554 58889999999999999999999999999999   6654334667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC----CcCCCchhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK----LKNITNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~----~~~~~~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.+.+.|+||++||..+.    .+|..++.+...|..  ++++|
T Consensus       102 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  172 (260)
T PRK12823        102 EEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGINRVPYSAAKGGVNALTA--SLAFE  172 (260)
T ss_pred             hhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCCCCccHHHHHHHHHHHH--HHHHH
Confidence            78899999999999999999999999999988777899999998753    234444566667666  55544

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.1e-20  Score=131.10  Aligned_cols=140  Identities=16%  Similarity=0.138  Sum_probs=114.0

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++.. +. ++..+.||++|+++++++++++.+.++++|++   +|.. ...++
T Consensus        25 ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~-~~~~~  101 (296)
T PRK05872         25 LARRLHARGAKLALVDLEEAELAALAAELGG-DD-RVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIA-SGGSV  101 (296)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CC-cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCcCc
Confidence            3567889999999999999888888777743 22 47777899999999999999999999999999   7765 34677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.+. .|+||++||..+..+.+..      +.+...|..  +++.|
T Consensus       102 ~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~--~l~~e  173 (296)
T PRK05872        102 AQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFAN--ALRLE  173 (296)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            788999999999999999999999999999775 4899999999887765443      234455555  44443

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.83  E-value=4.9e-20  Score=128.88  Aligned_cols=142  Identities=16%  Similarity=0.086  Sum_probs=115.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc-----
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN-----   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~-----   73 (147)
                      ++.|+++|++|++++|+.+..+++.+++...+. ++.++.+|++|++++..+++++.+.++++|++   +|...+     
T Consensus        27 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  105 (278)
T PRK08277         27 AKELARAGAKVAILDRNQEKAEAVVAEIKAAGG-EALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTD  105 (278)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccc
Confidence            567889999999999998888888888876654 68899999999999999999999999999999   664311     


Q ss_pred             ---------chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhcccc
Q 040927           74 ---------WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLS  138 (147)
Q Consensus        74 ---------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~  138 (147)
                               ..++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.|+||++||..+..+.++.      +++...++
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~  185 (278)
T PRK08277        106 NEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFT  185 (278)
T ss_pred             cccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCCCCchhHHHHHHHHHHH
Confidence                     134667889999999999999999999999999988877999999999887664432      34445555


Q ss_pred             chhhhhcc
Q 040927          139 DWMRCRRS  146 (147)
Q Consensus       139 ~~~al~~e  146 (147)
                      .  ++++|
T Consensus       186 ~--~la~e  191 (278)
T PRK08277        186 Q--WLAVH  191 (278)
T ss_pred             H--HHHHH
Confidence            5  45444

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.83  E-value=5.9e-20  Score=128.19  Aligned_cols=137  Identities=23%  Similarity=0.230  Sum_probs=113.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++.     ++.++.||++|++++.++++.+.+.++++|++   +|.. ...++.
T Consensus        22 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~   95 (273)
T PRK07825         22 ARALAALGARVAIGDLDEALAKETAAELG-----LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVM-PVGPFL   95 (273)
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHhc-----cceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCccc
Confidence            56788999999999999888777666652     47788999999999999999999999999999   7766 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.++.      +.+...|.+  +++.|
T Consensus        96 ~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~l~~e  167 (273)
T PRK07825         96 DEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTD--AARLE  167 (273)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence            8889999999999999999999999999998888999999999887765543      334445555  55554

>PRK06194 hypothetical protein; Provisional

Probab=99.83  E-value=3.8e-20  Score=129.94  Aligned_cols=142  Identities=21%  Similarity=0.207  Sum_probs=115.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.+++..+++...+. ++.++.+|++|.++++++++.+.+.++++|++   ||.... .++
T Consensus        22 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~-~~~   99 (287)
T PRK06194         22 FARIGAALGMKLVLADVQQDALDRAVAELRAQGA-EVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAG-GLV   99 (287)
T ss_pred             HHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CCc
Confidence            3577889999999999998888888888766554 58889999999999999999999999999999   776533 666


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC------CeEEEEcCCCCCCcCCCc------hhhhccccchhhhhc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS------PRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRR  145 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~  145 (147)
                      .+.+.++|+..+++|+.+++.+++.++|.|.++..      |+||++||..+..+.++.      +.+...++.  ++++
T Consensus       100 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~--~l~~  177 (287)
T PRK06194        100 WENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTE--TLYQ  177 (287)
T ss_pred             ccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHHHHHHHHHHH--HHHH
Confidence            77889999999999999999999999999987654      799999999887654332      344455555  4544


Q ss_pred             c
Q 040927          146 S  146 (147)
Q Consensus       146 e  146 (147)
                      |
T Consensus       178 e  178 (287)
T PRK06194        178 D  178 (287)
T ss_pred             H
Confidence            3

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.83  E-value=6.4e-20  Score=127.03  Aligned_cols=141  Identities=18%  Similarity=0.164  Sum_probs=114.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+ .+.+++.+.+...+. ++.++.||+++++++.++++++.+.+|++|++   +|.. ...++
T Consensus        31 ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~-~~~~~  107 (258)
T PRK06935         31 YAVALAKAGADIIITTHG-TNWDETRRLIEKEGR-KVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTI-RRAPL  107 (258)
T ss_pred             HHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence            356788999999999998 566666666665554 58899999999999999999999999999998   6655 33566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+.      ++.+...+..  ++++|
T Consensus       108 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  180 (258)
T PRK06935        108 LEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTK--AFANE  180 (258)
T ss_pred             ccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHHHHH--HHHHH
Confidence            7788999999999999999999999999998887799999999887655433      3345556655  66655

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.83  E-value=8e-21  Score=124.73  Aligned_cols=137  Identities=23%  Similarity=0.266  Sum_probs=114.1

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHh-hcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSS-QFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~id~l---ag~~~~~~~   76 (147)
                      ++++|+++|+.|+.++|+.+...++....      .+..+.+|+++++++..+..++.. .+|.+|++   ||.... .|
T Consensus        24 la~ef~~~G~~V~AtaR~~e~M~~L~~~~------gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~-~P   96 (289)
T KOG1209|consen   24 LAKEFARNGYLVYATARRLEPMAQLAIQF------GLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCT-FP   96 (289)
T ss_pred             HHHHHHhCCeEEEEEccccchHhhHHHhh------CCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcc-cc
Confidence            46789999999999999987766554332      378899999999999999999988 67999999   887643 66


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhccC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e~  147 (147)
                      ..+.+.+.++++|++|++|.+.|++++. ++.-..+|.|||++|..+..|+|-.      ++++++++.  .||-|+
T Consensus        97 a~d~~i~ave~~f~vNvfG~irM~~a~~-h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~--tLrlEl  170 (289)
T KOG1209|consen   97 ALDATIAAVEQCFKVNVFGHIRMCRALS-HFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYAR--TLRLEL  170 (289)
T ss_pred             cccCCHHHHHhhhccceeeeehHHHHHH-HHHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhh--hcEEee
Confidence            7789999999999999999999999999 5544456999999999999887644      467788887  777764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.83  E-value=8.4e-20  Score=126.22  Aligned_cols=126  Identities=20%  Similarity=0.176  Sum_probs=109.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+..+++.+.++..+. ++..+.+|++|+++++++++.+.+.++++|++   +|.. ...++.
T Consensus        27 a~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~-~~~~~~  104 (255)
T PRK07523         27 AEGLAQAGAEVILNGRDPAKLAAAAESLKGQGL-SAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQ-FRTPLE  104 (255)
T ss_pred             HHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCc-eEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChh
Confidence            567888999999999998888888888876654 58899999999999999999999999999999   6655 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|++.+++|+.+++.+++.+.+.|.+++.|+||++||..+..+.++
T Consensus       105 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  155 (255)
T PRK07523        105 DFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPG  155 (255)
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCC
Confidence            889999999999999999999999999998877799999999887665443

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.83  E-value=3.9e-20  Score=130.60  Aligned_cols=120  Identities=28%  Similarity=0.365  Sum_probs=106.9

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHh-cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKN-SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+.+|++|++..|+.+..++..+++.. ....++.++.||+++.+++.++.+++.+.++++|++   ||+..... 
T Consensus        51 ta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~-  129 (314)
T KOG1208|consen   51 TARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPF-  129 (314)
T ss_pred             HHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCc-
Confidence            3688999999999999999999999999986 333458889999999999999999999999999999   99874433 


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                        ..+.|.++.+|.+|+.|+|.|++.++|.|+.+..++|||+||..+
T Consensus       130 --~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~  174 (314)
T KOG1208|consen  130 --SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG  174 (314)
T ss_pred             --ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence              567789999999999999999999999999887799999999887

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.83  E-value=8.4e-20  Score=126.16  Aligned_cols=125  Identities=16%  Similarity=0.146  Sum_probs=108.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++..+.+|++|++++.++++.+.+.++++|++   +|.. ...++.
T Consensus        26 a~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~  103 (254)
T PRK08085         26 ATGLAEYGAEIIINDITAERAELAVAKLRQEGI-KAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQ-RRHPFT  103 (254)
T ss_pred             HHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-eEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcC-CCCChh
Confidence            567889999999999998888888888876654 57888999999999999999999999999999   6654 335677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      +.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.+
T Consensus       104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~  153 (254)
T PRK08085        104 EFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRD  153 (254)
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCC
Confidence            88999999999999999999999999999877778999999987765543

>PLN02253 xanthoxin dehydrogenase

Probab=99.83  E-value=5.9e-20  Score=128.59  Aligned_cols=141  Identities=21%  Similarity=0.172  Sum_probs=113.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc-chhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN-WYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~-~~~~   77 (147)
                      ++.|+++|++|++++|+.+..+++.+++.. + .++.++.+|++|+++++++++.+.+.+|++|++   +|.... ..++
T Consensus        35 a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~  112 (280)
T PLN02253         35 VRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-E-PNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDI  112 (280)
T ss_pred             HHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-C-CceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCc
Confidence            567889999999999988777777666632 2 258899999999999999999999999999999   665422 2456


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++++++|+.+++++++.++|.|.+.++|+||+++|..+..+.+      .++.+.+.++.  ++++|
T Consensus       113 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  185 (280)
T PLN02253        113 RNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTR--SVAAE  185 (280)
T ss_pred             ccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHHHHHHH--HHHHH
Confidence            788999999999999999999999999999877778999999988765543      23445556665  55554

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.83  E-value=9.8e-20  Score=129.56  Aligned_cols=122  Identities=20%  Similarity=0.092  Sum_probs=102.3

Q ss_pred             ccccccCC-cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHY-SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G-~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++| ++|++++|+.+.++++.+++...+. ++.++.+|++|.++++++++++.+.++++|++   ||...+..+.
T Consensus        20 a~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~   98 (314)
T TIGR01289        20 AKALAATGEWHVIMACRDFLKAEQAAKSLGMPKD-SYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKE   98 (314)
T ss_pred             HHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCC-eEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccc
Confidence            56788999 9999999998888888777754433 57888999999999999999998888999999   7764332333


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--CCeEEEEcCCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--SPRIVNASSSMGK  124 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~  124 (147)
                      .+.+.++|+.++++|+.+++++++.++|.|.+.+  .|+||++||.++.
T Consensus        99 ~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~  147 (314)
T TIGR01289        99 PRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGN  147 (314)
T ss_pred             cccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccc
Confidence            4568899999999999999999999999998763  4899999998774

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.1e-19  Score=126.12  Aligned_cols=142  Identities=20%  Similarity=0.193  Sum_probs=115.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHh-cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKN-SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.+++..++++. .+..++..+.+|++++++++++++.+.+.+|++|++   +|.. ...++
T Consensus        35 a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~  113 (262)
T PRK07831         35 ARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLG-GQTPV  113 (262)
T ss_pred             HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence            567889999999999998888888887765 343358889999999999999999999999999998   6754 34667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|.... .|+||+++|..+..+.++      .+++...+..  +++.|
T Consensus       114 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sKaal~~~~~--~la~e  187 (262)
T PRK07831        114 VDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTR--CSALE  187 (262)
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence            7889999999999999999999999999998775 689999999887665433      3455666666  55544

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.4e-19  Score=126.12  Aligned_cols=141  Identities=20%  Similarity=0.224  Sum_probs=117.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.||++|++++..+++.+.+.++++|++   +|.. ...++.
T Consensus        17 a~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~-~~~~~~   94 (270)
T PRK05650         17 ALRWAREGWRLALADVNEEGGEETLKLLREAGG-DGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVA-SGGFFE   94 (270)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcc
Confidence            567889999999999999888888888877665 68899999999999999999999999999999   6655 335667


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.+...      .+...|..  +|+.|
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~--~l~~e  166 (270)
T PRK05650         95 ELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSE--TLLVE  166 (270)
T ss_pred             cCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            88899999999999999999999999999887778999999998877654433      34444554  55544

>PRK09242 tropinone reductase; Provisional

Probab=99.83  E-value=1.4e-19  Score=125.26  Aligned_cols=127  Identities=20%  Similarity=0.122  Sum_probs=108.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.+++..+++.... +.++..+.+|+++++++..+++.+.+.++++|++   +|.. ...++
T Consensus        26 a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~  104 (257)
T PRK09242         26 AREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGN-IRKAA  104 (257)
T ss_pred             HHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCh
Confidence            56788899999999999988888888886651 2268889999999999999999999999999999   6654 33566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||..+..+.++
T Consensus       105 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~  156 (257)
T PRK09242        105 IDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRS  156 (257)
T ss_pred             hhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCC
Confidence            6889999999999999999999999999998877789999999988766433

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.83  E-value=5.2e-20  Score=129.98  Aligned_cols=141  Identities=11%  Similarity=-0.016  Sum_probs=109.0

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhc----------CC--CceEEEEecC--CC------------------HH
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNS----------GC--DNVIFHLLDV--TD------------------PA   48 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~----------~~--~~~~~~~~D~--~~------------------~~   48 (147)
                      +++.|++.|++|++ +|+.+.++++..++...          +.  .....+.+|+  ++                  ++
T Consensus        27 ~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~  105 (303)
T PLN02730         27 IAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNW  105 (303)
T ss_pred             HHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhhhcccccccCCHH
Confidence            36789999999999 78888888877666531          10  0146788898  43                  34


Q ss_pred             HHHHHHHHHHhhcCCccEE---ecCCC-cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           49 SVDSLVHFVSSQFGKLDIL---GGLPD-NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        49 ~~~~~~~~~~~~~g~id~l---ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      +++++++++.+++|++|++   ||... ...++.+.+.++|++++++|+.+++.+++.++|.|.+.  |+|||+||.++.
T Consensus       106 ~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~--G~II~isS~a~~  183 (303)
T PLN02730        106 TVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPG--GASISLTYIASE  183 (303)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--CEEEEEechhhc
Confidence            8999999999999999999   66432 23678889999999999999999999999999999764  899999998887


Q ss_pred             CcCCC-------chhhhccccchhhhhcc
Q 040927          125 LKNIT-------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus       125 ~~~~~-------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.       ++++...|+.  +|+.|
T Consensus       184 ~~~p~~~~~Y~asKaAl~~l~~--~la~E  210 (303)
T PLN02730        184 RIIPGYGGGMSSAKAALESDTR--VLAFE  210 (303)
T ss_pred             CCCCCCchhhHHHHHHHHHHHH--HHHHH
Confidence            66443       2345666666  66655

>PRK06484 short chain dehydrogenase; Validated

Probab=99.82  E-value=1.2e-19  Score=136.83  Aligned_cols=138  Identities=22%  Similarity=0.196  Sum_probs=112.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++   +. ++..+.+|++|+++++++++++.+.+|++|++   ||......++
T Consensus       285 ~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~  360 (520)
T PRK06484        285 VADRFAAAGDRLLIIDRDAEGAKKLAEAL---GD-EHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPS  360 (520)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-ceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCh
Confidence            36778999999999999988877776555   33 57788999999999999999999999999999   7765344577


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++++++|+.+++++++.++|+|.  +.|+||++||.++..+.++.      +++...|..  +|++|
T Consensus       361 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~e  431 (520)
T PRK06484        361 LEQSAEDFTRVYDVNLSGAFACARAAARLMS--QGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSR--SLACE  431 (520)
T ss_pred             hhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cCCEEEEECchhhcCCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            7889999999999999999999999999993  45899999999988765443      345555555  55544

>PRK07985 oxidoreductase; Provisional

Probab=99.82  E-value=1.3e-19  Score=127.83  Aligned_cols=141  Identities=18%  Similarity=0.113  Sum_probs=110.2

Q ss_pred             CccccccCCcEEEEeecCh--hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927            1 MKRSNQVHYSMGEATTKDE--KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~   75 (147)
                      +++.|+++|++|++++|+.  +..+++.+.+...+. ++.++.+|++|++++.++++++.+.+|++|++   +|......
T Consensus        65 ia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~  143 (294)
T PRK07985         65 AAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGR-KAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIP  143 (294)
T ss_pred             HHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCC-eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCC
Confidence            3577889999999988653  345555555555554 58889999999999999999999999999998   66543345


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      ++.+.+.++|++.+++|+.+++.+++.++|+|.+  +|+||++||..+..+.+.      ++++...++.  ++++|
T Consensus       144 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~asKaal~~l~~--~la~e  216 (294)
T PRK07985        144 DIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAILNYSR--GLAKQ  216 (294)
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence            6778899999999999999999999999999965  389999999988765443      2345555555  55544

>PRK06128 oxidoreductase; Provisional

Probab=99.82  E-value=1.6e-19  Score=127.74  Aligned_cols=140  Identities=21%  Similarity=0.176  Sum_probs=112.2

Q ss_pred             ccccccCCcEEEEeecChh--hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEK--RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++++.+  ..+++.+.++..+. ++.++.||++|+++++++++++.+.++++|++   +|......+
T Consensus        72 a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~  150 (300)
T PRK06128         72 AIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGR-KAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKD  150 (300)
T ss_pred             HHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCC
Confidence            5678899999999887543  45556666766654 68899999999999999999999999999999   776534456


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++++++.++|.|.+  +++||++||..+..+.+.      ++.+...|+.  +|++|
T Consensus       151 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  222 (300)
T PRK06128        151 IADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTK--ALAKQ  222 (300)
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            778899999999999999999999999999875  379999999987765433      3455666666  56554

>PRK08643 acetoin reductase; Validated

Probab=99.82  E-value=3.1e-19  Score=123.42  Aligned_cols=127  Identities=24%  Similarity=0.199  Sum_probs=108.8

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++..++...+. ++.++.+|++|++++.++++++.++++++|++   +|.. ...++
T Consensus        18 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~   95 (256)
T PRK08643         18 IAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGG-KAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVA-PTTPI   95 (256)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence            3567889999999999998888888888876654 58889999999999999999999999999998   6654 33567


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|++.+++|+.+++.+++.+++.|.+.+ .++||++||..+..+.++
T Consensus        96 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  148 (256)
T PRK08643         96 ETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE  148 (256)
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC
Confidence            7888999999999999999999999999997654 479999999988766543

>PRK06398 aldose dehydrogenase; Validated

Probab=99.82  E-value=6.9e-20  Score=127.02  Aligned_cols=130  Identities=19%  Similarity=0.170  Sum_probs=104.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+....            .++.++.||++|+++++++++++.+.++++|++   +|.. ...++.
T Consensus        23 a~~l~~~G~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~   89 (258)
T PRK06398         23 VNRLKEEGSNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIE-SYGAIH   89 (258)
T ss_pred             HHHHHHCCCeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcc
Confidence            566778888888888775321            147789999999999999999999999999999   7765 446778


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++.+++.++|+|.+++.|+||++||..+..+.+.      ++.+...+..  ++++|
T Consensus        90 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~--~la~e  161 (258)
T PRK06398         90 AVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTR--SIAVD  161 (258)
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHH--HHHHH
Confidence            889999999999999999999999999998877799999999887765433      3345555555  44444

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.8e-19  Score=127.14  Aligned_cols=141  Identities=19%  Similarity=0.192  Sum_probs=111.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|++++.++++.+.+.+|++|++   +|.... .++.
T Consensus        57 a~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~-~~~~  134 (293)
T PRK05866         57 AEQFARRGATVVAVARREDLLDAVADRITRAGG-DAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIR-RPLA  134 (293)
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-cchh
Confidence            567889999999999999888888888876654 58899999999999999999999999999999   665522 3333


Q ss_pred             cc--cHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc-------CCCchhhhccccchhhhhcc
Q 040927           79 TQ--TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK-------NITNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-------~~~~~~~~~~~~~~~al~~e  146 (147)
                      +.  +.++++..+++|+.|++.+++.++|.|.+.+.|+||++||.++..+       +..++++...|..  +++.|
T Consensus       135 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asKaal~~l~~--~la~e  209 (293)
T PRK05866        135 ESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSR--VIETE  209 (293)
T ss_pred             hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHHHHHHHHHH--HHHHH
Confidence            32  4578999999999999999999999998887899999999765432       2223345555655  55554

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.8e-19  Score=123.68  Aligned_cols=127  Identities=17%  Similarity=0.169  Sum_probs=108.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++...+. ++..+.+|++|+++++.+++++.+.++++|++   +|...+..++
T Consensus        21 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~   99 (258)
T PRK07890         21 LAVRAARAGADVVLAARTAERLDEVAAEIDDLGR-RALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPL   99 (258)
T ss_pred             HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCC-ceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCc
Confidence            3567889999999999998888888888876554 68899999999999999999999999999999   6654344567


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|++.+++|+.+++.+++.+.+.|.+.. ++||++||..+..+.++
T Consensus       100 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~~~  150 (258)
T PRK07890        100 ADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPK  150 (258)
T ss_pred             ccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCCCC
Confidence            7888999999999999999999999999997654 79999999887665443

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.82  E-value=9e-20  Score=129.69  Aligned_cols=123  Identities=20%  Similarity=0.210  Sum_probs=103.8

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++|+.+++++..+++.... ..++.++.||++|.++++++++++.+.++++|++   ||....  +
T Consensus        30 ~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~--~  107 (313)
T PRK05854         30 LARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTP--P  107 (313)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccC--C
Confidence            357789999999999999988888888886543 2258889999999999999999999999999999   776532  2


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                      ..+.+.+.|+.++++|+.|++.+++.++|.|.+. .++||++||.++..+
T Consensus       108 ~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~  156 (313)
T PRK05854        108 ERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRG  156 (313)
T ss_pred             ccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCC
Confidence            3356778999999999999999999999999765 589999999887543

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2e-19  Score=125.63  Aligned_cols=124  Identities=19%  Similarity=0.167  Sum_probs=104.2

Q ss_pred             CccccccCCcEEEEeecChhh-------HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecC
Q 040927            1 MKRSNQVHYSMGEATTKDEKR-------GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL   70 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~   70 (147)
                      +++.|+++|++|++++|+.+.       ++++.+++...+. ++.++.+|+++++++.++++++.+.++++|++   +|.
T Consensus        22 ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~  100 (273)
T PRK08278         22 IALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGG-QALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASA  100 (273)
T ss_pred             HHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence            357788999999999997542       4555666666654 68899999999999999999999999999999   665


Q ss_pred             CCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           71 PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                      . ...++.+.+.++|++.+++|+.+++.+++.++|.|.++++|+|+++||..+..+
T Consensus       101 ~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  155 (273)
T PRK08278        101 I-NLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP  155 (273)
T ss_pred             c-CCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc
Confidence            4 335677889999999999999999999999999998887789999999876554

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.82  E-value=3.3e-19  Score=123.25  Aligned_cols=126  Identities=16%  Similarity=0.150  Sum_probs=110.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.++++..+. ++.++.||++|++++.++++++.+.++++|++   +|.. ...++.
T Consensus        28 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~  105 (256)
T PRK06124         28 ARALAGAGAHVLVNGRNAATLEAAVAALRAAGG-AAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGAR-DRRPLA  105 (256)
T ss_pred             HHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChh
Confidence            567888999999999998888888888877665 58899999999999999999999999999999   6655 336677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|++.+++|+.+++.+.+.++|.|.+++.++||++||..+..+.+.
T Consensus       106 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~  156 (256)
T PRK06124        106 ELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG  156 (256)
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC
Confidence            888999999999999999999999999998877899999999988766543

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.82  E-value=9e-20  Score=130.00  Aligned_cols=143  Identities=11%  Similarity=0.056  Sum_probs=108.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCC--ccEE---ecCCCc-
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGK--LDIL---GGLPDN-   73 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~--id~l---ag~~~~-   73 (147)
                      +++.|+++|++|++++|+.+.++++.+++.... ..++..+.+|+++  ++.+.++++.+.++.  +|++   ||...+ 
T Consensus        69 lA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~didilVnnAG~~~~~  146 (320)
T PLN02780         69 FAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIEGLDVGVLINNVGVSYPY  146 (320)
T ss_pred             HHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhcCCCccEEEEecCcCCCC
Confidence            367889999999999999999999988887643 2357888999985  334445555555554  5577   776532 


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC-c-CCC------chhhhccccchhhhhc
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL-K-NIT------NEWAKGVLSDWMRCRR  145 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~-~~~------~~~~~~~~~~~~al~~  145 (147)
                      ..++.+.+.+++++.+++|+.|++.+++.++|.|.++++|+||++||.++.. + .|.      ++++...|+.  +|+.
T Consensus       147 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~--~L~~  224 (320)
T PLN02780        147 ARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSR--CLYV  224 (320)
T ss_pred             CcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHHHHHHHHHH--HHHH
Confidence            2456788999999999999999999999999999988889999999988854 2 222      2456667776  6776


Q ss_pred             cC
Q 040927          146 SI  147 (147)
Q Consensus       146 e~  147 (147)
                      |+
T Consensus       225 El  226 (320)
T PLN02780        225 EY  226 (320)
T ss_pred             HH
Confidence            63

>PRK09186 flagellin modification protein A; Provisional

Probab=99.81  E-value=2.8e-19  Score=123.56  Aligned_cols=125  Identities=14%  Similarity=0.135  Sum_probs=104.3

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhc-CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC--cc
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD--NW   74 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~--~~   74 (147)
                      +++.|+++|++|++++|+.+.++++.+++... +...+.++.||++|++++.++++.+.+.++++|++   ||...  ..
T Consensus        20 ~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~   99 (256)
T PRK09186         20 LVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYG   99 (256)
T ss_pred             HHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccc
Confidence            35778899999999999988888888887543 33246677999999999999999999999999999   55321  12


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL  125 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  125 (147)
                      .++.+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+..
T Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  150 (256)
T PRK09186        100 KKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVV  150 (256)
T ss_pred             CccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhc
Confidence            456788999999999999999999999999999887778999999987653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.81  E-value=1.3e-19  Score=125.46  Aligned_cols=137  Identities=19%  Similarity=0.131  Sum_probs=105.7

Q ss_pred             ccccccCCcEEEEeecCh--hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---
Q 040927            2 KRSNQVHYSMGEATTKDE--KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---   73 (147)
                      ++.|+++|++|++++|+.  +.++++.+++   +. ++.++.+|++|+++++++++++.+.+|++|++   ||....   
T Consensus        26 a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~  101 (256)
T PRK07889         26 ARVAQEQGAEVVLTGFGRALRLTERIAKRL---PE-PAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSAL  101 (256)
T ss_pred             HHHHHHCCCEEEEecCccchhHHHHHHHhc---CC-CCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEcccccccccc
Confidence            577899999999999864  3344444443   22 47789999999999999999999999999999   776522   


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC------CCchhhhccccchhhhhccC
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN------ITNEWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------~~~~~~~~~~~~~~al~~e~  147 (147)
                      ..++.+.+.++|++.+++|+.+++.+++.++|+|++  +|+||++||.. ..+.      ..++++...|+.  +|++|+
T Consensus       102 ~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~~~~~Y~asKaal~~l~~--~la~el  176 (256)
T PRK07889        102 GGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWPAYDWMGVAKAALESTNR--YLARDL  176 (256)
T ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCCccchhHHHHHHHHHHHH--HHHHHh
Confidence            135667889999999999999999999999999974  48999998754 2222      345567777777  666653

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.9e-19  Score=124.08  Aligned_cols=126  Identities=18%  Similarity=0.225  Sum_probs=106.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+++..+++...+.....++.+|++|+++++++++++.+.++++|++   +|.. ...++.
T Consensus        17 a~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~-~~~~~~   95 (272)
T PRK07832         17 ALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGIS-AWGTVD   95 (272)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCccc
Confidence            567888999999999998888888888876654335567899999999999999999999999999   6655 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCCCCcCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~  128 (147)
                      +.+.++|+..+++|+.+++.+++.++|.|.+. ..|+||++||..+..+.+
T Consensus        96 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~  146 (272)
T PRK07832         96 RLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALP  146 (272)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCC
Confidence            89999999999999999999999999999764 358999999988765543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.81  E-value=2.5e-19  Score=123.84  Aligned_cols=140  Identities=14%  Similarity=0.084  Sum_probs=109.4

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++++.  .++..+++...+. ++..+.+|++|.++++++++++.++++++|++   ||.. ...++
T Consensus        26 ~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~-~~~~~  101 (253)
T PRK08993         26 MALGLAEAGCDIVGINIVE--PTETIEQVTALGR-RFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLI-RREDA  101 (253)
T ss_pred             HHHHHHHCCCEEEEecCcc--hHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCCc
Confidence            3567889999999887753  2445555655543 58889999999999999999999999999998   7765 33567


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|.+++ +|+||++||..+..+.+      .++.+...++.  ++++|
T Consensus       102 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e  175 (253)
T PRK08993        102 IEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTR--LMANE  175 (253)
T ss_pred             ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence            7888999999999999999999999999997753 58999999988766543      23445555555  55544

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4.4e-19  Score=121.63  Aligned_cols=127  Identities=17%  Similarity=0.150  Sum_probs=109.1

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+..+++.+++...+. ++.++.+|++|++++.++++.+.+.++++|++   +|.. ...++
T Consensus        22 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~-~~~~~   99 (241)
T PRK07454         22 TALAFAKAGWDLALVARSQDALEALAAELRSTGV-KAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMA-YTGPL   99 (241)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcc-CCCch
Confidence            3567889999999999998888888777776554 58899999999999999999999999999999   6655 33566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+..+.+.
T Consensus       100 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  151 (241)
T PRK07454        100 LEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ  151 (241)
T ss_pred             hhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC
Confidence            7788999999999999999999999999998877799999999887665443

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.81  E-value=3.4e-19  Score=123.39  Aligned_cols=125  Identities=16%  Similarity=0.126  Sum_probs=106.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+...+++..+++....+ .++.++.||++|++++.++++++.+.++++|++   +|.. ...++
T Consensus        19 a~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~-~~~~~   97 (259)
T PRK12384         19 CHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIA-KAAFI   97 (259)
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCc
Confidence            567889999999999998888877777765432 358899999999999999999999999999998   6655 33567


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKN  127 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~  127 (147)
                      .+.+.++|++.+++|+.+++++.+.++|.|.+.+ .++||++||..+..+.
T Consensus        98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~  148 (259)
T PRK12384         98 TDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS  148 (259)
T ss_pred             ccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC
Confidence            7889999999999999999999999999998765 6899999998776543

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.81  E-value=5.2e-19  Score=122.56  Aligned_cols=138  Identities=16%  Similarity=0.115  Sum_probs=110.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+++..+++....+.++.++.+|++|++++.++++.    ++++|++   +|.. ...++.
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~g~id~lv~~ag~~-~~~~~~   98 (259)
T PRK06125         24 AEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----AGDIDILVNNAGAI-PGGGLD   98 (259)
T ss_pred             HHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCC-CCCCcc
Confidence            5668889999999999998888888888765433688999999999999887754    4889998   6765 336777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|+.++++|+.+++++++.++|.|.+++.|+||++||..+..+.+.      .+.+...+..  +++.|
T Consensus        99 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~~--~la~e  170 (259)
T PRK06125         99 DVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTR--ALGGK  170 (259)
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHHHH--HHHHH
Confidence            899999999999999999999999999998877789999999888765433      2345555555  45443

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.81  E-value=6.5e-19  Score=121.82  Aligned_cols=141  Identities=16%  Similarity=0.161  Sum_probs=114.2

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+..+++.+++...+. ++.++.+|++|.+++.+++..+.+.++++|++   +|...+ .++
T Consensus        27 la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~-~~~  104 (255)
T PRK06113         27 IAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGP-KPF  104 (255)
T ss_pred             HHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CCC
Confidence            3567889999999999998888888888876654 58889999999999999999999999999999   665422 333


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                       +.+.++|++.+++|+.+++++++.++|+|.+.+.++||++||..+..+.++.      +++...++.  ++++|
T Consensus       105 -~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~~  176 (255)
T PRK06113        105 -DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVR--NMAFD  176 (255)
T ss_pred             -CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence             5788999999999999999999999999987767899999998887665432      344555555  45443

>PRK06484 short chain dehydrogenase; Validated

Probab=99.81  E-value=4.9e-19  Score=133.50  Aligned_cols=140  Identities=19%  Similarity=0.174  Sum_probs=113.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-cchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-NWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-~~~~   76 (147)
                      +++.|+++|++|++++|+.+.+++..+++   +. ++..+.+|++|+++++++++.+.+.++++|++   +|... ...+
T Consensus        21 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~   96 (520)
T PRK06484         21 ACQRFARAGDQVVVADRNVERARERADSL---GP-DHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTA   96 (520)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-ceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcc
Confidence            35778999999999999988777766655   33 57889999999999999999999999999999   67632 2356


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCC-eEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP-RIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++.++++++|+|.+++.| +||++||..+..+.+.      ++++...|..  ++++|
T Consensus        97 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~e  171 (520)
T PRK06484         97 TLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTR--SLACE  171 (520)
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            6788999999999999999999999999999776555 9999999988776543      3345556665  55555

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.80  E-value=6.1e-19  Score=122.43  Aligned_cols=122  Identities=22%  Similarity=0.226  Sum_probs=101.8

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++   +. ++.++.||++|++++.++++.+.+.++++|++   +|.... ..+
T Consensus        22 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~   96 (261)
T PRK08265         22 VARALVAAGARVAIVDIDADNGAAVAASL---GE-RARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLD-DGL   96 (261)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-eeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC-CcC
Confidence            35678899999999999987777766655   32 58889999999999999999999999999999   665422 222


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                       +.+.++|++.+++|+.+++.+++.++|.|. ++.|+||++||.++..+.+.
T Consensus        97 -~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~  146 (261)
T PRK08265         97 -ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTG  146 (261)
T ss_pred             -cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCC
Confidence             568899999999999999999999999997 55689999999988766443

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=3.6e-19  Score=126.25  Aligned_cols=141  Identities=16%  Similarity=0.169  Sum_probs=112.5

Q ss_pred             CccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++++ .+..++..+++...+. ++.++.+|++|++++.++++.+.+ +|++|++   +|.... .+
T Consensus        28 ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dv~d~~~~~~~~~~~~~-~g~iD~li~nAG~~~~-~~  104 (306)
T PRK07792         28 EALGLARLGATVVVNDVASALDASDVLDEIRAAGA-KAVAVAGDISQRATADELVATAVG-LGGLDIVVNNAGITRD-RM  104 (306)
T ss_pred             HHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCC-CC
Confidence            357789999999999875 4566777788877665 688999999999999999999988 9999999   776633 56


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-------CCCeEEEEcCCCCCCcCCC------chhhhccccchhhh
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-------DSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRC  143 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-------~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al  143 (147)
                      +.+.+.++|+..+++|+.+++++++.+.|+|.+.       ..|+||++||.++..+.+.      .+.+...++.  ++
T Consensus       105 ~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~l  182 (306)
T PRK07792        105 LFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTL--SA  182 (306)
T ss_pred             cccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHHHHHHHHHHHHH--HH
Confidence            6778899999999999999999999999998643       1379999999887765433      3345555555  55


Q ss_pred             hcc
Q 040927          144 RRS  146 (147)
Q Consensus       144 ~~e  146 (147)
                      ++|
T Consensus       183 a~e  185 (306)
T PRK07792        183 ARA  185 (306)
T ss_pred             HHH
Confidence            554

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=1.1e-18  Score=119.57  Aligned_cols=127  Identities=24%  Similarity=0.270  Sum_probs=108.8

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+..++..+++...+. ++.++.+|+++++++.++++++.+.++++|++   +|.. ...++
T Consensus        23 l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~  100 (239)
T PRK07666         23 VAIALAKEGVNVGLLARTEENLKAVAEEVEAYGV-KVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGIS-KFGKF  100 (239)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccc-cCCCc
Confidence            3567889999999999998888888888866554 68899999999999999999999999999999   5654 33556


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|++.+++|+.+++.+++.+.|.|.+++.+++|++||..+..+.++
T Consensus       101 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~  152 (239)
T PRK07666        101 LELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAV  152 (239)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCC
Confidence            6788899999999999999999999999998887789999999887766544

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.80  E-value=7.1e-19  Score=121.69  Aligned_cols=142  Identities=16%  Similarity=0.056  Sum_probs=107.4

Q ss_pred             CccccccC-CcEEEEeecChhh-HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927            1 MKRSNQVH-YSMGEATTKDEKR-GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         1 ~~~~l~~~-G~~v~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~   75 (147)
                      ++++|+++ |++|++++|+.+. ++++.+++...+..++.++.+|++|++++.++++++.+ ++++|++   +|...+..
T Consensus        24 la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~g~id~li~~ag~~~~~~  102 (253)
T PRK07904         24 ICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-GGDVDVAIVAFGLLGDAE  102 (253)
T ss_pred             HHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-cCCCCEEEEeeecCCchh
Confidence            35677777 4999999999876 88888888776544688999999999999999999886 4899987   56542211


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                       ....+.+++.+.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++      ++++...|..  +++.|
T Consensus       103 -~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~~~~~~--~l~~e  176 (253)
T PRK07904        103 -ELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYL--GLGEA  176 (253)
T ss_pred             -hcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence             11234556678899999999999999999999888899999999887654332      2344455544  55544

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.80  E-value=5.6e-19  Score=123.63  Aligned_cols=135  Identities=24%  Similarity=0.227  Sum_probs=109.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc-CCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.    ..   .+.++.+|++|+++++++++.+.+.+ +++|++   +|.. ...++
T Consensus        21 a~~l~~~G~~Vi~~~r~~~~~~~l~----~~---~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~-~~~~~   92 (277)
T PRK05993         21 ARALQSDGWRVFATCRKEEDVAALE----AE---GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYG-QPGAV   92 (277)
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHH----HC---CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcC-CCCCc
Confidence            5678899999999999987665432    22   36788999999999999999997776 689998   6655 34667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|+..+++|+.|++.+++.++|.|.+.+.|+||++||..+..+.+.      ++++...|+.  +||.|
T Consensus        93 ~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~l~~e  165 (277)
T PRK05993         93 EDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSL--TLRME  165 (277)
T ss_pred             ccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHH--HHHHH
Confidence            7889999999999999999999999999999888899999999988766443      3455666666  66654

>PRK06182 short chain dehydrogenase; Validated

Probab=99.80  E-value=7.1e-19  Score=122.79  Aligned_cols=135  Identities=23%  Similarity=0.274  Sum_probs=108.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.    ..   ++.++.+|++|+++++++++++.+.++++|++   +|.. ...++.
T Consensus        20 a~~l~~~G~~V~~~~r~~~~l~~~~----~~---~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~   91 (273)
T PRK06182         20 ARRLAAQGYTVYGAARRVDKMEDLA----SL---GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYG-SYGAIE   91 (273)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHH----hC---CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcC-CCCchh
Confidence            5678889999999999987655432    11   37789999999999999999999999999999   6765 446777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|+..+++|+.+++.+++.++|.|++.+.|+||++||..+..+.+..      +.+...|..  +++.|
T Consensus        92 ~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~--~l~~e  163 (273)
T PRK06182         92 DVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSD--ALRLE  163 (273)
T ss_pred             hCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999988877899999998876554332      344455554  45543

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.80  E-value=8.9e-19  Score=120.04  Aligned_cols=144  Identities=15%  Similarity=0.123  Sum_probs=115.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCC--HHHHHHHHHHHHhhc-CCccEE---ecCCCcc
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTD--PASVDSLVHFVSSQF-GKLDIL---GGLPDNW   74 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~-g~id~l---ag~~~~~   74 (147)
                      +++.|+++|++|++++|+.+.+++..+++...+......+.+|+++  .+++.++++++.+.+ +.+|++   +|.....
T Consensus        22 la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~  101 (239)
T PRK08703         22 VAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYAL  101 (239)
T ss_pred             HHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccC
Confidence            3567888999999999999888888888876554357788999986  568899999998888 789999   6654344


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e  146 (147)
                      .++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.+++|++||..+..+.+      .++.+...++.  ++++|
T Consensus       102 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e  177 (239)
T PRK08703        102 SPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCK--VAADE  177 (239)
T ss_pred             CCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHhHHHHHHHHH--HHHHH
Confidence            567788999999999999999999999999999887778999999988776543      33455556655  55544

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.80  E-value=3.4e-19  Score=123.75  Aligned_cols=138  Identities=18%  Similarity=0.120  Sum_probs=107.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   + .++.++.+|++|+++++++++++.+.++++|++   +|......++.
T Consensus        23 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~   98 (263)
T PRK06200         23 VERFLAEGARVAVLERSAEKLASLRQRF---G-DHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLV   98 (263)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcc
Confidence            5678899999999999988777665554   2 257889999999999999999999999999999   77543334444


Q ss_pred             cccHHH----HHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           79 TQTYEL----AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.++    |++++++|+.+++.+++.++|.|.+. +|+||++||..+..+.++      ++++...+..  ++++|
T Consensus        99 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  173 (263)
T PRK06200         99 DIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVR--QLAYE  173 (263)
T ss_pred             cCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            555554    89999999999999999999998765 489999999888765433      3445555555  55544

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=1.1e-18  Score=120.71  Aligned_cols=126  Identities=17%  Similarity=0.099  Sum_probs=103.6

Q ss_pred             CccccccCCcEEEEeecC-----------hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--
Q 040927            1 MKRSNQVHYSMGEATTKD-----------EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--   67 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--   67 (147)
                      +++.|+++|++|++++|+           ......+.+++...+. ++.++.+|+++++++..+++.+.+.++++|++  
T Consensus        23 la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~  101 (256)
T PRK12748         23 VCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGV-RCEHMEIDLSQPYAPNRVFYAVSERLGDPSILIN  101 (256)
T ss_pred             HHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            367888999999999987           2222234555655554 68899999999999999999999999999998  


Q ss_pred             -ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           68 -GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        68 -ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                       +|.. ...++.+.+.+++++.+++|+.+++.+++.++|.|.+...++||++||..+..+.+
T Consensus       102 ~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~  162 (256)
T PRK12748        102 NAAYS-THTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMP  162 (256)
T ss_pred             CCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCC
Confidence             6654 34667788899999999999999999999999999877778999999988766544

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.80  E-value=9.6e-19  Score=120.47  Aligned_cols=143  Identities=17%  Similarity=0.177  Sum_probs=115.0

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC--cch
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD--NWY   75 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~--~~~   75 (147)
                      +++.|+++|++|++++|+.+..+++.+++...+. ++..+.+|++|.++++++++.+.+.++++|++   +|...  ...
T Consensus        22 la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~  100 (250)
T PRK07774         22 YAEALAREGASVVVADINAEGAERVAKQIVADGG-TAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLD  100 (250)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCC
Confidence            3577889999999999998777777777766554 57888999999999999999999999999999   66542  234


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC---CCchhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN---ITNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---~~~~~~~~~~~~~~al~~e  146 (147)
                      ++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.|+||++||..+..+.   ..++.+.+.+..  ++++|
T Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~Y~~sK~a~~~~~~--~l~~~  172 (250)
T PRK07774        101 LLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSNFYGLAKVGLNGLTQ--QLARE  172 (250)
T ss_pred             ChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCccccHHHHHHHHHHHH--HHHHH
Confidence            5667888999999999999999999999999988777899999998776543   233455566665  55544

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.3e-18  Score=121.08  Aligned_cols=140  Identities=16%  Similarity=0.137  Sum_probs=112.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+++..+++...+. +..++.+|++|++++.++++++.+.++++|++   +|.. ...++.
T Consensus        26 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~-~~~~~~  103 (264)
T PRK07576         26 AQAFARAGANVAVASRSQEKVDAAVAQLQQAGP-EGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGN-FPAPAA  103 (264)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCccc
Confidence            567888999999999998888777777776654 57889999999999999999999999999999   5544 235666


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++.++++++|.|.+. +|+||++||..+..+.+..      +.+...|+.  +++.|
T Consensus       104 ~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l~~--~la~e  174 (264)
T PRK07576        104 GMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTR--TLALE  174 (264)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHHHHHHHHHHH--HHHHH
Confidence            78899999999999999999999999999765 4899999998876654433      334445555  44443

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=1.2e-18  Score=119.92  Aligned_cols=125  Identities=11%  Similarity=0.050  Sum_probs=106.9

Q ss_pred             CccccccCCcEEEE-eecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEA-TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l-~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++ ..|+.+..+++.++++..+. ++.++.+|++|++++.++++++.+.++++|++   +|.. ...+
T Consensus        20 ~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~   97 (250)
T PRK08063         20 IALRLAEEGYDIAVNYARSRKAAEETAEEIEALGR-KALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASG-VLRP   97 (250)
T ss_pred             HHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCC
Confidence            36778899999876 57888888888888877665 58899999999999999999999999999999   5654 3466


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                      +.+.+.++|+..+++|+.+++.++++++|.|.+++.|+||++||..+..+.
T Consensus        98 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  148 (250)
T PRK08063         98 AMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYL  148 (250)
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCC
Confidence            778889999999999999999999999999988878899999998766553

>PRK07069 short chain dehydrogenase; Validated

Probab=99.80  E-value=1.7e-18  Score=119.23  Aligned_cols=127  Identities=18%  Similarity=0.130  Sum_probs=106.0

Q ss_pred             ccccccCCcEEEEeecC-hhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+ .+.++++.+++..... .....+.+|++|++++.++++++.+.++++|++   +|.. ...+
T Consensus        16 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~   94 (251)
T PRK07069         16 ARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVG-SFGA   94 (251)
T ss_pred             HHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcC-CCCC
Confidence            56788899999999998 6667777777765432 235568899999999999999999999999998   6655 3356


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.+.+++++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.++
T Consensus        95 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~  147 (251)
T PRK07069         95 IEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPD  147 (251)
T ss_pred             hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCC
Confidence            77888999999999999999999999999999877789999999988765443

>TIGR02415 23BDH acetoin reductases

Probab=99.80  E-value=1.4e-18  Score=119.95  Aligned_cols=126  Identities=20%  Similarity=0.196  Sum_probs=108.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++..+.+|++|++++.+++..+.+.++++|++   +|.. ...++.
T Consensus        17 a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~   94 (254)
T TIGR02415        17 AERLAKDGFAVAVADLNEETAKETAKEINQAGG-KAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVA-PITPIL   94 (254)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcc
Confidence            567889999999999998888888888876654 68899999999999999999999999999998   6654 446777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|++.+++|+.+++.+++.+++.|.+.+ +++||++||..+..+.+.
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  146 (254)
T TIGR02415        95 EITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI  146 (254)
T ss_pred             cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC
Confidence            889999999999999999999999999998764 479999999888766543

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=6.2e-19  Score=121.93  Aligned_cols=137  Identities=20%  Similarity=0.208  Sum_probs=105.9

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|+++.++.+..   .+++...   ++.++.+|++|+++++++++++.+.++++|++   +|.. ...++
T Consensus        23 ~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~   95 (255)
T PRK06463         23 IAEAFLREGAKVAVLYNSAENE---AKELREK---GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIM-YLMPF   95 (255)
T ss_pred             HHHHHHHCCCEEEEEeCCcHHH---HHHHHhC---CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCh
Confidence            3567889999999887754322   2233322   36789999999999999999999999999999   6765 33567


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc-------CCCchhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK-------NITNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-------~~~~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+       |..++++...+..  ++++|
T Consensus        96 ~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  169 (255)
T PRK06463         96 EEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTR--RLAFE  169 (255)
T ss_pred             hhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHH--HHHHH
Confidence            7788999999999999999999999999998777799999999876532       2223455556665  55554

>PRK12743 oxidoreductase; Provisional

Probab=99.79  E-value=1.7e-18  Score=119.81  Aligned_cols=127  Identities=15%  Similarity=0.120  Sum_probs=106.2

Q ss_pred             ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|+++++ +.+.++++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   +|.... .++
T Consensus        19 a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~-~~~   96 (256)
T PRK12743         19 ALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGV-RAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTK-APF   96 (256)
T ss_pred             HHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CCh
Confidence            5678899999998865 56667777778777665 68999999999999999999999999999999   665533 556


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN  130 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~  130 (147)
                      .+.+.++|++.+++|+.+++.+++.++++|.+++ +|+||++||..+..+.++.
T Consensus        97 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~  150 (256)
T PRK12743         97 LDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGA  150 (256)
T ss_pred             hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCc
Confidence            6788999999999999999999999999997653 5899999998877665443

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.9e-18  Score=120.03  Aligned_cols=126  Identities=19%  Similarity=0.198  Sum_probs=108.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+.+...+. ++.++.+|+++++++.++++++.+.++++|++   ||.. ...++.
T Consensus        27 a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~-~~~~~~  104 (263)
T PRK07814         27 ALAFAEAGADVLIAARTESQLDEVAEQIRAAGR-RAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGT-MPNPLL  104 (263)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            567888999999999998888888888766554 58889999999999999999999999999999   6654 235666


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhcc-CCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQL-SDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|+..+++|+.+++.+.+.+.|+|.+ .+.|+||++||..+..+.++
T Consensus       105 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  156 (263)
T PRK07814        105 STSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRG  156 (263)
T ss_pred             hCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCC
Confidence            7889999999999999999999999999977 45689999999988766544

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.1e-18  Score=120.55  Aligned_cols=140  Identities=14%  Similarity=0.129  Sum_probs=109.6

Q ss_pred             CccccccCCcEEEEee-cChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhh----cC--CccEE---ecC
Q 040927            1 MKRSNQVHYSMGEATT-KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQ----FG--KLDIL---GGL   70 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~----~g--~id~l---ag~   70 (147)
                      +++.|++.|++|+++. ++.+..+++..++...+. ++..+.+|+++.+++..+++++.+.    ++  ++|++   ||.
T Consensus        20 ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~   98 (252)
T PRK12747         20 IAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGG-SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI   98 (252)
T ss_pred             HHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCc
Confidence            3577899999998875 566777777777776654 5788899999999999999888753    34  89999   776


Q ss_pred             CCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhh
Q 040927           71 PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCR  144 (147)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~  144 (147)
                      . ...++.+.+.++|++++++|+.++++++++++|.|.+.  |+||++||.++..+.+..      +++...++.  +++
T Consensus        99 ~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la  173 (252)
T PRK12747         99 G-PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--SRIINISSAATRISLPDFIAYSMTKGAINTMTF--TLA  173 (252)
T ss_pred             C-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--CeEEEECCcccccCCCCchhHHHHHHHHHHHHH--HHH
Confidence            5 34567788999999999999999999999999999754  899999999987664432      345555555  454


Q ss_pred             cc
Q 040927          145 RS  146 (147)
Q Consensus       145 ~e  146 (147)
                      +|
T Consensus       174 ~e  175 (252)
T PRK12747        174 KQ  175 (252)
T ss_pred             HH
Confidence            44

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.79  E-value=2.3e-18  Score=119.46  Aligned_cols=142  Identities=20%  Similarity=0.164  Sum_probs=112.1

Q ss_pred             CccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|+++.|+ .+..+.+.+++...+. ++.++.+|++|.+++.++++.+.+.++++|++   +|.. ...+
T Consensus        23 ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~-~~~~  100 (261)
T PRK08936         23 MAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGG-EAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIE-NAVP  100 (261)
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCC
Confidence            356788999999998885 4556667777766654 68889999999999999999999999999998   6655 3356


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++.+++.++|.|.+.. .|+||++||..+..+.+..      +.+...|..  .+++|
T Consensus       101 ~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e  175 (261)
T PRK08936        101 SHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTE--TLAME  175 (261)
T ss_pred             hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHHHHHHHH--HHHHH
Confidence            67788999999999999999999999999998764 5899999998876654432      334455555  44443

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.79  E-value=1.1e-18  Score=119.89  Aligned_cols=127  Identities=20%  Similarity=0.121  Sum_probs=105.2

Q ss_pred             CccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++. .++....++..+++...+. ++..+.+|++|.+++.++++++.+.++++|++   +|... ..+
T Consensus        19 ~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~   96 (246)
T PRK12938         19 ICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGF-DFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITR-DVV   96 (246)
T ss_pred             HHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCC
Confidence            367888999998875 4555566666777766554 57888999999999999999999999999999   66653 356


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++
T Consensus        97 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  149 (246)
T PRK12938         97 FRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG  149 (246)
T ss_pred             hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCC
Confidence            77889999999999999999999999999998877789999999887766443

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.5e-18  Score=120.27  Aligned_cols=123  Identities=23%  Similarity=0.177  Sum_probs=104.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhh-cCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQ-FGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++|+.+.++++...+.  + .++.++.+|++|.+++.++++.+.+. ++++|++   +|.. ...+
T Consensus        17 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~-~~~~   92 (260)
T PRK08267         17 TALLFAAEGWRVGAYDINEAGLAALAAELG--A-GNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGIL-RGGP   92 (260)
T ss_pred             HHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--C-CceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCC-CCCc
Confidence            356788999999999999888777766654  3 25889999999999999999988776 6899998   6765 3356


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                      +.+.+.++++.++++|+.+++.+++.+.|.|+..+.++||++||..+..+.
T Consensus        93 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~  143 (260)
T PRK08267         93 FEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ  143 (260)
T ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC
Confidence            667889999999999999999999999999998878999999998877654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.79  E-value=1.2e-18  Score=119.98  Aligned_cols=140  Identities=14%  Similarity=0.111  Sum_probs=109.1

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++++|+++|++|++++|+.  ..+..+.+...+. ++..+.+|+++++++.++++++.+.++++|++   +|... ..++
T Consensus        21 ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~-~~~~   96 (248)
T TIGR01832        21 IAVGLAEAGADIVGAGRSE--PSETQQQVEALGR-RFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIR-RADA   96 (248)
T ss_pred             HHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCh
Confidence            3678899999999999875  2344555555454 58899999999999999999999998999999   67653 3566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+      .++++...+..  ++++|
T Consensus        97 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e  170 (248)
T TIGR01832        97 EEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAGLTK--LLANE  170 (248)
T ss_pred             hhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            6788899999999999999999999999997665 68999999987665432      23345555555  45544

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3e-18  Score=119.89  Aligned_cols=125  Identities=21%  Similarity=0.229  Sum_probs=104.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++.+.+.    .+.++..+.+|++|++++.++++.+.+.++++|++   +|.. ...++
T Consensus        20 la~~l~~~G~~V~~~~r~~~~~~~l~~~----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~-~~~~~   94 (277)
T PRK06180         20 LAQAALAAGHRVVGTVRSEAARADFEAL----HPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYG-HEGAI   94 (277)
T ss_pred             HHHHHHhCcCEEEEEeCCHHHHHHHHhh----cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcc-CCccc
Confidence            3567888999999999998766554332    22358889999999999999999999999999999   6765 34667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN  130 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  130 (147)
                      .+.+.++|++.+++|+.+++.+++.++|+|++.+.++||++||..+..+.++.
T Consensus        95 ~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~  147 (277)
T PRK06180         95 EESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGI  147 (277)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCc
Confidence            78889999999999999999999999999988877899999999887765443

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.1e-18  Score=121.49  Aligned_cols=134  Identities=26%  Similarity=0.240  Sum_probs=108.0

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+..+.       .  .++.++.+|++|+++++++++.+.+.+|++|++   +|.. ...++
T Consensus        20 ~a~~l~~~g~~V~~~~r~~~~~~~-------~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~-~~~~~   89 (270)
T PRK06179         20 TAEKLARAGYRVFGTSRNPARAAP-------I--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVG-LAGAA   89 (270)
T ss_pred             HHHHHHHCCCEEEEEeCChhhccc-------c--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCC-CCcCc
Confidence            356788999999999998654321       1  247889999999999999999999999999999   6765 34667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.+++++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.+..      +.+...+..  ++++|
T Consensus        90 ~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~l~~e  162 (270)
T PRK06179         90 EESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSE--SLDHE  162 (270)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHH--HHHHH
Confidence            78899999999999999999999999999998888999999999887665443      234445544  55544

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.4e-18  Score=118.54  Aligned_cols=126  Identities=19%  Similarity=0.217  Sum_probs=106.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+..++..+++. .+. ++..+.||++|++++.++++.+.+.++++|++   +|.. ...++
T Consensus        21 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~-~~~~~   97 (252)
T PRK06138         21 TAKLFAREGARVVVADRDAEAAERVAAAIA-AGG-RAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFG-CGGTV   97 (252)
T ss_pred             HHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence            356788899999999999887777777765 333 58899999999999999999999999999999   6654 33556


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.+++++.+++|+.+++.+++.++|.|++++.++|+++||..+..+.++
T Consensus        98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~  149 (252)
T PRK06138         98 VTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRG  149 (252)
T ss_pred             ccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCC
Confidence            6788999999999999999999999999998877789999999877655433

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.78  E-value=1.8e-18  Score=118.31  Aligned_cols=136  Identities=10%  Similarity=-0.006  Sum_probs=105.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+...   +++...+   +.++.+|++|+++++++++++.+.++++|++   +|.... ....
T Consensus        19 a~~l~~~G~~V~~~~r~~~~~~---~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~-~~~~   91 (236)
T PRK06483         19 AWHLLAQGQPVIVSYRTHYPAI---DGLRQAG---AQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLA-EKPG   91 (236)
T ss_pred             HHHHHHCCCeEEEEeCCchhHH---HHHHHcC---CEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccC-CCcC
Confidence            5678899999999999875432   3333322   5778999999999999999999999999998   665422 3345


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--CCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--SPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|.+.+  .|+||++||..+..+.+.      ++++...++.  ++++|
T Consensus        92 ~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~--~~a~e  165 (236)
T PRK06483         92 APLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTL--SFAAK  165 (236)
T ss_pred             ccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHH--HHHHH
Confidence            678899999999999999999999999998765  589999999887655432      3445566665  45544

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.78  E-value=3.5e-18  Score=118.31  Aligned_cols=143  Identities=11%  Similarity=0.003  Sum_probs=107.7

Q ss_pred             cccccc----CCcEEEEeecChhhHHHHHHHHHhc-CCCceEEEEecCCCHHHHHHHHHHHHhhcCCc----cEE---ec
Q 040927            2 KRSNQV----HYSMGEATTKDEKRGLAAVEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKL----DIL---GG   69 (147)
Q Consensus         2 ~~~l~~----~G~~v~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i----d~l---ag   69 (147)
                      ++.|++    .|++|++++|+.+.++++.+++... ++.++.++.+|++|+++++++++.+.+.++.+    |++   ||
T Consensus        17 a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG   96 (256)
T TIGR01500        17 AQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAG   96 (256)
T ss_pred             HHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCc
Confidence            445554    7999999999998888888888753 22258889999999999999999998877653    455   77


Q ss_pred             CCCcch-hhhc-ccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--CCeEEEEcCCCCCCcCCCc------hhhhccccc
Q 040927           70 LPDNWY-KMLT-QTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--SPRIVNASSSMGKLKNITN------EWAKGVLSD  139 (147)
Q Consensus        70 ~~~~~~-~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~~------~~~~~~~~~  139 (147)
                      ...... ...+ .+.++|++.+++|+.+++.+++.++|.|.++.  .++||++||..+..+.+..      +.+...|+.
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~  176 (256)
T TIGR01500        97 TLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQ  176 (256)
T ss_pred             ccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCchHHHHHHHHHHHHHH
Confidence            543222 2222 35789999999999999999999999998653  4789999999887665443      345556665


Q ss_pred             hhhhhcc
Q 040927          140 WMRCRRS  146 (147)
Q Consensus       140 ~~al~~e  146 (147)
                        +|+.|
T Consensus       177 --~la~e  181 (256)
T TIGR01500       177 --VLALE  181 (256)
T ss_pred             --HHHHH
Confidence              55554

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.78  E-value=4e-18  Score=116.73  Aligned_cols=128  Identities=16%  Similarity=0.135  Sum_probs=104.3

Q ss_pred             CccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++|+ .+..++..++++..+. ++.++.+|++|++++..+++++.+.++++|++   +|.. ...+
T Consensus        14 ~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~-~~~~   91 (239)
T TIGR01831        14 IANRLAADGFEICVHYHSGRSDAESVVSAIQAQGG-NARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGIT-RDAA   91 (239)
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCC-eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCc
Confidence            356788999999998865 5566777777776665 68999999999999999999999889999998   6655 2345


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHH-HhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALI-PLLQLSDSPRIVNASSSMGKLKNITN  130 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~iv~isS~~~~~~~~~~  130 (147)
                      +.+.+.++|+.++++|+.+++++.+.++ |.+++.+.++||++||..+..+.+..
T Consensus        92 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~  146 (239)
T TIGR01831        92 FPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQ  146 (239)
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCC
Confidence            6678899999999999999999999875 55555566899999998887775543

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=3.7e-18  Score=117.50  Aligned_cols=127  Identities=20%  Similarity=0.206  Sum_probs=108.2

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++++|+++|++|++++|+.+..+++.+.+.. +. ++.++.||++|++++.++++++.+.++++|++   +|......++
T Consensus        21 l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~   98 (251)
T PRK07231         21 IARRFAAEGARVVVTDRNEEAAERVAAEILA-GG-RAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPL   98 (251)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCh
Confidence            3567888999999999999888777777655 33 58899999999999999999998899999999   6654344566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++
T Consensus        99 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  150 (251)
T PRK07231         99 LDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG  150 (251)
T ss_pred             hhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCC
Confidence            7788999999999999999999999999998877789999999887766544

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.78  E-value=4e-18  Score=118.12  Aligned_cols=126  Identities=20%  Similarity=0.179  Sum_probs=106.1

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.++++...+++...+. ++.++.||++|+++++++++++.+.++++|++   +|.. ...++
T Consensus        28 la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~-~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~-~~~~~  105 (259)
T PRK08213         28 IAEALGEAGARVVLSARKAEELEEAAAHLEALGI-DALWIAADVADEADIERLAEETLERFGHVDILVNNAGAT-WGAPA  105 (259)
T ss_pred             HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCCh
Confidence            3567888999999999998888888888776654 58889999999999999999999998999998   6654 23556


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHh-hccCCCCeEEEEcCCCCCCcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPL-LQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      .+.+.+.|++.+++|+.+++.+++++.|+ |.+++.+++|++||..+..+.+
T Consensus       106 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~  157 (259)
T PRK08213        106 EDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNP  157 (259)
T ss_pred             hhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC
Confidence            67888999999999999999999999998 7766668999999987665443

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4.2e-18  Score=118.28  Aligned_cols=124  Identities=18%  Similarity=0.222  Sum_probs=105.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+++..+++ ..+. ++.++.+|++|++++..+++.+.+ ++++|++   +|.. ...++.
T Consensus        22 a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~-~~~~~~~D~~d~~~~~~~~~~~~~-~~~id~lv~~ag~~-~~~~~~   97 (263)
T PRK09072         22 AEALAAAGARLLLVGRNAEKLEALAARL-PYPG-RHRWVVADLTSEAGREAVLARARE-MGGINVLINNAGVN-HFALLE   97 (263)
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCC-ceEEEEccCCCHHHHHHHHHHHHh-cCCCCEEEECCCCC-Cccccc
Confidence            5678899999999999988888877777 3343 688999999999999999998876 7899999   6655 345677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.+++++++++|+.|++.+++.++|+|.+.+.+.||++||..+..+.++
T Consensus        98 ~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  148 (263)
T PRK09072         98 DQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPG  148 (263)
T ss_pred             cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCC
Confidence            888999999999999999999999999998887789999999888766544

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.78  E-value=4.9e-18  Score=117.04  Aligned_cols=124  Identities=23%  Similarity=0.248  Sum_probs=103.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+.+   +. ++.++.+|++|.+++.++++++.+.++++|++   +|......++.
T Consensus        17 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~   92 (248)
T PRK10538         17 TRRFIQQGHKVIATGRRQERLQELKDEL---GD-NLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAH   92 (248)
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHh---cc-ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcc
Confidence            5678889999999999987776655544   32 58889999999999999999999999999998   66543334566


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.++
T Consensus        93 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  143 (248)
T PRK10538         93 KASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG  143 (248)
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCC
Confidence            788899999999999999999999999998877789999999887765433

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.78  E-value=2.7e-18  Score=118.06  Aligned_cols=125  Identities=21%  Similarity=0.238  Sum_probs=104.7

Q ss_pred             CccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|+++.+ +.+..++..+++...+. ++.++.+|++|++++.++++++.+.++++|++   +|.. ....
T Consensus        22 la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~   99 (247)
T PRK12935         22 ITVALAQEGAKVVINYNSSKEAAENLVNELGKEGH-DVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGIT-RDRT   99 (247)
T ss_pred             HHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCC
Confidence            35678889999987654 55667777777776664 68999999999999999999999999999999   6665 3355


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                      +.+.+.+++++.+++|+.+++.+++.++|.|.+.+.+++|++||..+..+.
T Consensus       100 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~  150 (247)
T PRK12935        100 FKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG  150 (247)
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC
Confidence            667888999999999999999999999999987777899999998876554

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.78  E-value=5.6e-18  Score=116.58  Aligned_cols=127  Identities=19%  Similarity=0.122  Sum_probs=107.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++|+.+.++++.+++.... +.++.++.+|++|++++.++++++.+.++++|++   +|.. ...+
T Consensus        18 la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~   96 (248)
T PRK08251         18 MAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIG-KGAR   96 (248)
T ss_pred             HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCC
Confidence            356788999999999999988888877776542 2258899999999999999999999999999998   6765 3355


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      +.+.+.+.+++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.+
T Consensus        97 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  148 (248)
T PRK08251         97 LGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP  148 (248)
T ss_pred             cCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC
Confidence            6667788999999999999999999999999887778999999988776654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.78  E-value=4.8e-18  Score=116.95  Aligned_cols=127  Identities=21%  Similarity=0.233  Sum_probs=108.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+..+++.+++...+. ++.++.+|++|+++++++++.+.+.++++|++   +|.. ...++
T Consensus        19 la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~   96 (250)
T TIGR03206        19 TCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGG-NAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWD-KFGPF   96 (250)
T ss_pred             HHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCh
Confidence            3567889999999999998888888787776654 58899999999999999999999999999988   6654 33566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|++.+++|+.+++.+.+.++|.|.+.+.++||++||..+..+.+.
T Consensus        97 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~  148 (250)
T TIGR03206        97 TKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG  148 (250)
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC
Confidence            6788899999999999999999999999998877789999999887665433

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4.6e-18  Score=116.97  Aligned_cols=127  Identities=20%  Similarity=0.178  Sum_probs=109.4

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.+++..++++..+. ++.++.+|++|+++++++++++.+.++++|++   +|.... .++
T Consensus        23 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~-~~~  100 (250)
T PRK12939         23 FAEALAEAGATVAFNDGLAAEARELAAALEAAGG-RAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNS-KSA  100 (250)
T ss_pred             HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CCh
Confidence            3567888999999999998888888888876654 68999999999999999999999999999999   665533 566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|.+++.|++|++||..+..+.+.
T Consensus       101 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  152 (250)
T PRK12939        101 TELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK  152 (250)
T ss_pred             hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC
Confidence            7788999999999999999999999999998877789999999887766543

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.78  E-value=1.4e-18  Score=120.69  Aligned_cols=139  Identities=18%  Similarity=0.063  Sum_probs=105.3

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+.   .+. ++..+.+|++|.+++.++++++.+.++++|++   +|......++
T Consensus        21 ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~   96 (262)
T TIGR03325        21 IVDRFVAEGARVAVLDKSAAGLQELEAA---HGD-AVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTAL   96 (262)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCC-ceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCcc
Confidence            3577889999999999988766654332   232 58889999999999999999999999999999   7754222333


Q ss_pred             hccc----HHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           78 LTQT----YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+    .++|++.+++|+.+++.+++.++|.|.+.+ |+||+++|..+..+.+.      ++.+...+..  ++++|
T Consensus        97 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~l~~--~la~e  172 (262)
T TIGR03325        97 VDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVK--ELAFE  172 (262)
T ss_pred             ccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCchhHHHHHHHHHHHH--HHHHh
Confidence            3333    257999999999999999999999997654 78999999887765432      3455566665  55554

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.78  E-value=4.8e-18  Score=116.93  Aligned_cols=127  Identities=19%  Similarity=0.161  Sum_probs=103.9

Q ss_pred             CccccccCCcEEEEee-cChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATT-KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|+++. |+.+.++.+.+++...+. ++..+.||++|++++.++++++.+.++++|++   +|......+
T Consensus        18 la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~   96 (248)
T PRK06947         18 TAVLAAARGWSVGINYARDAAAAEETADAVRAAGG-RACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMP   96 (248)
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCC
Confidence            3567889999988765 666777777777766554 68899999999999999999999888999999   665533355


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC---CCeEEEEcCCCCCCcCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD---SPRIVNASSSMGKLKNI  128 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~  128 (147)
                      +.+.+.++|+..+++|+.+++.+++.+++.|...+   .++||++||..+..+.+
T Consensus        97 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~  151 (248)
T PRK06947         97 LADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP  151 (248)
T ss_pred             hhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC
Confidence            66788999999999999999999999999986543   47899999988765543

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.7e-18  Score=118.81  Aligned_cols=123  Identities=28%  Similarity=0.267  Sum_probs=104.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+.+   +. ++.++.+|++|++++.++++.+.+.++++|++   +|.. ...++.
T Consensus        20 a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~   94 (275)
T PRK08263         20 TEAALERGDRVVATARDTATLADLAEKY---GD-RLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYG-LFGMIE   94 (275)
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHhc---cC-CeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCc-cccccc
Confidence            5667889999999999987766654433   22 57888999999999999999999999999998   7765 446677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.+.
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~  145 (275)
T PRK08263         95 EVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPM  145 (275)
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCC
Confidence            889999999999999999999999999998877789999999888776544

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.3e-18  Score=118.94  Aligned_cols=127  Identities=15%  Similarity=0.092  Sum_probs=106.3

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++|+.+..++..+++...+ ..++.++.+|++|++++.++++++.+.++++|++   +|......+
T Consensus        23 la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~  102 (276)
T PRK05875         23 VAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGP  102 (276)
T ss_pred             HHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCC
Confidence            356788999999999999887777777776542 1357889999999999999999999999999999   665433356


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                      +.+.+.++|+.++++|+.+++.+++.+++.|.+.+.++|+++||..+..+.
T Consensus       103 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~  153 (276)
T PRK05875        103 ITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH  153 (276)
T ss_pred             hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC
Confidence            667888999999999999999999999999987777899999998876553

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.77  E-value=5.1e-18  Score=117.74  Aligned_cols=120  Identities=24%  Similarity=0.218  Sum_probs=101.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.. ..+..+++...+. ++.++.+|++++++++++++++.+.++++|++   +|.. ...++.
T Consensus        23 a~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~   99 (263)
T PRK08226         23 ARVFARHGANLILLDISPE-IEKLADELCGRGH-RCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVC-RLGSFL   99 (263)
T ss_pred             HHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCC-ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcc
Confidence            5678889999999999874 4445555555444 58889999999999999999999999999999   6665 446677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      +.+.++|++.+++|+.+++.+++.++|+|.+.+.++||++||..+.
T Consensus       100 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  145 (263)
T PRK08226        100 DMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGD  145 (263)
T ss_pred             cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc
Confidence            8888999999999999999999999999987767899999997763

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.77  E-value=5.6e-18  Score=117.03  Aligned_cols=127  Identities=21%  Similarity=0.263  Sum_probs=109.8

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++++|.++|++|++++|+.+..++..+++...+. ++..+.||++|++++.++++.+.+.++++|++   +|.. ...++
T Consensus        20 la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~-~~~~~   97 (258)
T PRK12429         20 IALALAKEGAKVVIADLNDEAAAAAAEALQKAGG-KAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQ-HVAPI   97 (258)
T ss_pred             HHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCh
Confidence            3567888999999999999888888888876664 68899999999999999999999999999998   5654 33566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++++..+++|+.+++.+++.++|.|++.+.++||++||..+..+.++
T Consensus        98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~  149 (258)
T PRK12429         98 EDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAG  149 (258)
T ss_pred             hhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC
Confidence            6788899999999999999999999999999887889999999887766544

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.77  E-value=5.2e-18  Score=116.71  Aligned_cols=126  Identities=19%  Similarity=0.188  Sum_probs=102.9

Q ss_pred             ccccccCCcEEEEee-cChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATT-KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++|+++|++|+++. |+.+..++..+++...+. ++.++.||++|.+++.++++++.+.++++|++   +|......++
T Consensus        19 a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~   97 (248)
T PRK06123         19 ALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGG-EALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRL   97 (248)
T ss_pred             HHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCC-cEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCh
Confidence            567889999998887 455566666667766554 57889999999999999999999999999998   6665333456


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC---CCeEEEEcCCCCCCcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD---SPRIVNASSSMGKLKNI  128 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~  128 (147)
                      .+.+.++|+..+++|+.+++.+++.++|.|.++.   +|+||++||..+..+.+
T Consensus        98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  151 (248)
T PRK06123         98 EQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP  151 (248)
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC
Confidence            6788999999999999999999999999997542   47899999988766544

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=4.6e-18  Score=117.06  Aligned_cols=127  Identities=24%  Similarity=0.280  Sum_probs=107.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC--CHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT--DPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|++.|++|++++|+.+.++++.+++...+..++.++.+|++  +++++..+++.+.+.++++|++   +|......+
T Consensus        29 a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~  108 (247)
T PRK08945         29 ALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGP  108 (247)
T ss_pred             HHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCC
Confidence            56788899999999999988888888887665445777778875  7899999999999999999999   665434456


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      +.+.+.+.|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+
T Consensus       109 ~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~  160 (247)
T PRK08945        109 MEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRA  160 (247)
T ss_pred             cccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCC
Confidence            6678889999999999999999999999999888889999999988766543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.77  E-value=7.3e-18  Score=120.32  Aligned_cols=121  Identities=20%  Similarity=0.128  Sum_probs=101.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|.++++++++++.+.++++|++   ||......+..
T Consensus        23 a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~  101 (322)
T PRK07453         23 AKALAKRGWHVIMACRNLKKAEAAAQELGIPPD-SYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEP  101 (322)
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHhhccCC-ceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCC
Confidence            567889999999999999888888887754333 58889999999999999999988777889999   77653322334


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC--CeEEEEcCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS--PRIVNASSSMG  123 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~iv~isS~~~  123 (147)
                      +.+.++|+..+++|+.|++.+++.++|.|++++.  ++||++||...
T Consensus       102 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~  148 (322)
T PRK07453        102 LRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTA  148 (322)
T ss_pred             CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEccccc
Confidence            5688999999999999999999999999987753  59999999764

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1e-18  Score=123.83  Aligned_cols=121  Identities=20%  Similarity=0.189  Sum_probs=101.0

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhc-CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++|+.+..++..+++... +..++.++.+|++|.++++++++++.+.++++|++   ||.....  
T Consensus        32 ~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~--  109 (306)
T PRK06197         32 TAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTP--  109 (306)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCC--
Confidence            35778899999999999988887777777643 22357889999999999999999999999999999   7754221  


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                       ...+.++++..+++|+.+++.+++.++|.|++.+.++||++||..+.
T Consensus       110 -~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~  156 (306)
T PRK06197        110 -KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHR  156 (306)
T ss_pred             -CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHh
Confidence             24566789999999999999999999999988777899999997654

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.77  E-value=7.7e-18  Score=118.66  Aligned_cols=141  Identities=22%  Similarity=0.199  Sum_probs=109.7

Q ss_pred             CccccccCCcEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++|+.. ..+...+.+...+. ++.++.||++|.+++.++++++.+.++++|++   +|......+
T Consensus        62 la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~  140 (290)
T PRK06701         62 VAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGV-KCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQS  140 (290)
T ss_pred             HHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCC
Confidence            35678899999999999853 45555566655554 58899999999999999999999999999998   665433456


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|.+.+++|+.+++.+++++++.|+.  .++||++||..+..+.+.      ++.+...+..  ++++|
T Consensus       141 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~l~~--~la~~  212 (290)
T PRK06701        141 LEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSATKGAIHAFTR--SLAQS  212 (290)
T ss_pred             cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence            678899999999999999999999999999854  378999999887665433      2334455554  45543

>PRK05717 oxidoreductase; Validated

Probab=99.76  E-value=8.4e-18  Score=116.28  Aligned_cols=123  Identities=24%  Similarity=0.245  Sum_probs=101.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc-chh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN-WYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~-~~~   76 (147)
                      +++.|+++|++|++++|+....++..+++   +. ++.++.+|++|++++.++++++.+++|++|++   +|.... ..+
T Consensus        26 ~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  101 (255)
T PRK05717         26 IAAWLIAEGWQVVLADLDRERGSKVAKAL---GE-NAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTT  101 (255)
T ss_pred             HHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CC-ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCC
Confidence            35778899999999999876666554443   32 57889999999999999999999999999998   665432 246


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      +.+.+.++|+..+++|+.+++.+++++.|+|.+. .|+||++||..+..+.+
T Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~  152 (255)
T PRK05717        102 LESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEP  152 (255)
T ss_pred             hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCC
Confidence            6678899999999999999999999999999765 48999999998876644

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.76  E-value=1.1e-17  Score=115.97  Aligned_cols=124  Identities=15%  Similarity=0.136  Sum_probs=106.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+..++..+++...+. ++.++.+|++|.++++++++.+.+.++++|++   +|.. ...++.
T Consensus        24 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~  101 (262)
T PRK13394         24 ALELARAGAAVAIADLNQDGANAVADEINKAGG-KAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQ-IVNPIE  101 (262)
T ss_pred             HHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCc-eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccC-CCCchh
Confidence            567889999999999999888888888877665 58889999999999999999999889999998   6654 335556


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhh-ccCCCCeEEEEcCCCCCCcC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLL-QLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~iv~isS~~~~~~~  127 (147)
                      +.+.++|+..+++|+.+++.+++.+++.| ++.+.++||++||..+..+.
T Consensus       102 ~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~  151 (262)
T PRK13394        102 NYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS  151 (262)
T ss_pred             hCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC
Confidence            77889999999999999999999999999 66667899999998776553

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.76  E-value=7.7e-18  Score=116.55  Aligned_cols=124  Identities=20%  Similarity=0.204  Sum_probs=103.9

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+..+++.+++   +. ++..+.+|++|++++..+++++.+.++++|++   +|.. ...++
T Consensus        22 ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~   96 (257)
T PRK07067         22 VAERYLAEGARVVIADIKPARARLAALEI---GP-AAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALF-DMAPI   96 (257)
T ss_pred             HHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCc
Confidence            36778899999999999988777766655   22 47889999999999999999999999999998   6655 33667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|+..+++|+.+++.+++.++|.|.+++ +++||++||..+..+.++
T Consensus        97 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  149 (257)
T PRK07067         97 LDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEAL  149 (257)
T ss_pred             ccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCC
Confidence            7888999999999999999999999999987653 479999999877666443

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.76  E-value=7.6e-18  Score=117.84  Aligned_cols=112  Identities=20%  Similarity=0.195  Sum_probs=93.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+ +|++|++++|+.+.++++.+++...+. ++.++.||++|++++.++++++ ++++++|++   ||...      
T Consensus        18 a~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id~li~nAG~~~------   88 (275)
T PRK06940         18 ARRVG-AGKKVLLADYNEENLEAAAKTLREAGF-DVSTQEVDVSSRESVKALAATA-QTLGPVTGLVHTAGVSP------   88 (275)
T ss_pred             HHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEeecCCHHHHHHHHHHH-HhcCCCCEEEECCCcCC------
Confidence            45675 799999999998888888888876554 6889999999999999999988 567999999   67541      


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                        +.++|++++++|+.+++++++.++|.|.+.  |++|++||.++..+
T Consensus        89 --~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~  132 (275)
T PRK06940         89 --SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRL  132 (275)
T ss_pred             --chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccC
Confidence              236789999999999999999999999654  77899999887654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.76  E-value=9.7e-18  Score=129.55  Aligned_cols=142  Identities=19%  Similarity=0.185  Sum_probs=114.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.+|++|++   +|.... ..+
T Consensus       387 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~-~~~  464 (657)
T PRK07201        387 TAIKVAEAGATVFLVARNGEALDELVAEIRAKGG-TAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIR-RSV  464 (657)
T ss_pred             HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC-CCh
Confidence            3567889999999999999988888888877665 68899999999999999999999999999999   665422 222


Q ss_pred             hc--ccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           78 LT--QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      ..  .+.+++++.+++|+.+++.+++.++|.|++++.|+||++||.++..+.+.      ++++...|..  +++.|
T Consensus       465 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  539 (657)
T PRK07201        465 ENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSD--VAASE  539 (657)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHHHHHHHH--HHHHH
Confidence            22  23578999999999999999999999999888899999999887765443      2345556665  55554

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.2e-17  Score=115.54  Aligned_cols=125  Identities=19%  Similarity=0.142  Sum_probs=106.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.++++++.+++...+. ++.++.+|+++++++.++++++.+.++++|++   +|.. ...++.
T Consensus        26 a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~-~~~~~~  103 (258)
T PRK06949         26 AQVLAQAGAKVVLASRRVERLKELRAEIEAEGG-AAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVS-TTQKLV  103 (258)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcc
Confidence            567888999999999999888888888766554 58899999999999999999999999999999   6654 335666


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--------CCeEEEEcCCCCCCcCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--------SPRIVNASSSMGKLKNI  128 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--------~~~iv~isS~~~~~~~~  128 (147)
                      +.+.++|+.++++|+.+++.+.+.++|.|.++.        .++||++||..+..+.+
T Consensus       104 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  161 (258)
T PRK06949        104 DVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP  161 (258)
T ss_pred             cCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC
Confidence            778899999999999999999999999987653        47999999988776543

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.76  E-value=1.8e-18  Score=114.66  Aligned_cols=128  Identities=22%  Similarity=0.191  Sum_probs=103.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHh-cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKN-SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +.+|.++|..+.+...+.++.+. ..+|++ .+..++.++.||+++..++++.++++...+|.+|++   ||+..     
T Consensus        22 sk~Ll~kgik~~~i~~~~En~~a-~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~-----   95 (261)
T KOG4169|consen   22 SKALLEKGIKVLVIDDSEENPEA-IAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILD-----   95 (261)
T ss_pred             HHHHHHcCchheeehhhhhCHHH-HHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEccccccc-----
Confidence            46788899998888777777554 444444 344468999999999999999999999999999999   77762     


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC---CCeEEEEcCCCCCCcCCCc------hhhhccccc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD---SPRIVNASSSMGKLKNITN------EWAKGVLSD  139 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~------~~~~~~~~~  139 (147)
                          ..+|++++++|+.|.+..+...+|+|.+..   +|-|||+||..|.-|.|..      ++.+..|+-
T Consensus        96 ----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTR  162 (261)
T KOG4169|consen   96 ----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTR  162 (261)
T ss_pred             ----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeeh
Confidence                467999999999999999999999998764   5789999999999885543      445555655

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.76  E-value=1.9e-17  Score=113.35  Aligned_cols=126  Identities=21%  Similarity=0.167  Sum_probs=105.4

Q ss_pred             ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|+++.| +....++..+++...+. ++.++.+|++|+++++++++.+.+.++++|++   +|... ..++
T Consensus        17 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~   94 (242)
T TIGR01829        17 CQRLAKDGYRVAANCGPNEERAEAWLQEQGALGF-DFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITR-DATF   94 (242)
T ss_pred             HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCC-ceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCh
Confidence            5678899999999988 66666666666655554 58899999999999999999999999999999   66552 3456


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.++
T Consensus        95 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~  146 (242)
T TIGR01829        95 KKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFG  146 (242)
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC
Confidence            6788999999999999999999999999998877789999999887766543

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.9e-17  Score=115.87  Aligned_cols=126  Identities=22%  Similarity=0.275  Sum_probs=105.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+..+++.+++...+ ..++.++.+|++|+++++. ++++.+.++++|++   +|.. ....+
T Consensus        20 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~-~~~~~   97 (280)
T PRK06914         20 TLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYA-NGGFV   97 (280)
T ss_pred             HHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEECCccc-ccCcc
Confidence            56788899999999999888877777665543 2358899999999999999 89998888999998   6655 33556


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.+++++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.++
T Consensus        98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~  149 (280)
T PRK06914         98 EEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPG  149 (280)
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCC
Confidence            6788899999999999999999999999998877789999999887766443

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.4e-17  Score=114.37  Aligned_cols=123  Identities=22%  Similarity=0.180  Sum_probs=102.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+..++..+++...+..++.++.||++|+++++++++++.+   .+|++   +|.... .++.
T Consensus        18 a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d~vv~~ag~~~~-~~~~   93 (243)
T PRK07102         18 ARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPDIVLIAVGTLGD-QAAC   93 (243)
T ss_pred             HHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCCEEEECCcCCCC-cccc
Confidence            5678899999999999998888777777655444689999999999999999888764   45888   665423 4566


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      +.+.+++.+.+++|+.+++++++.++|.|.+.+.+++|++||..+..+.+
T Consensus        94 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  143 (243)
T PRK07102         94 EADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRA  143 (243)
T ss_pred             cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCC
Confidence            78889999999999999999999999999988789999999988766543

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.8e-17  Score=115.87  Aligned_cols=126  Identities=20%  Similarity=0.237  Sum_probs=106.1

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.+++..+++...+. ++.++.+|++|++++.++++++.+.++++|++   +|.. ...+.
T Consensus        26 la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~-~~~~~  103 (274)
T PRK07775         26 TAIELAAAGFPVALGARRVEKCEELVDKIRADGG-EAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDT-YFGKL  103 (274)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcC-CCccc
Confidence            3577889999999999988777777777766564 58889999999999999999998888999998   6654 23555


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      .+.+.+++++.+++|+.+++++++.++|.|.+++.++||++||..+..+.+
T Consensus       104 ~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~  154 (274)
T PRK07775        104 HEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP  154 (274)
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC
Confidence            677889999999999999999999999999877778999999987765543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.75  E-value=2.1e-17  Score=113.54  Aligned_cols=127  Identities=17%  Similarity=0.144  Sum_probs=105.1

Q ss_pred             ccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|+++ .|+.+..++...++...+. ++..+.+|++|+++++++++++.+.++++|++   +|......++
T Consensus        18 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~   96 (247)
T PRK09730         18 ALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGG-KAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTV   96 (247)
T ss_pred             HHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCC-eEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcc
Confidence            56788899998774 6777777777777776654 58889999999999999999999889999999   6654344566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC---CCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD---SPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|+..+++|+.+++.+++.+++.|.+..   +|++|++||..+..+.+.
T Consensus        97 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~  151 (247)
T PRK09730         97 ENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG  151 (247)
T ss_pred             ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC
Confidence            7788999999999999999999999999987652   478999999887766543

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.75  E-value=8.2e-18  Score=116.43  Aligned_cols=122  Identities=20%  Similarity=0.181  Sum_probs=101.4

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.. +..+++...+. ++.++.+|+++++++.++++++.+.++++|++   +|... ...+
T Consensus        23 la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~   99 (258)
T PRK08628         23 ISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQP-RAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVND-GVGL   99 (258)
T ss_pred             HHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccC-CCcc
Confidence            3678899999999999988766 66677766665 58999999999999999999999999999999   66542 2334


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                      ...+ ++|+..+++|+.+++.+.+.++|.|.+. .++||++||..+..+.
T Consensus       100 ~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~  147 (258)
T PRK08628        100 EAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQ  147 (258)
T ss_pred             cCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCC
Confidence            4444 9999999999999999999999998765 4899999998877654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.75  E-value=2.2e-17  Score=113.28  Aligned_cols=126  Identities=20%  Similarity=0.092  Sum_probs=102.0

Q ss_pred             ccccccCCcEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.. ...+....+...+. ++.++.+|++|++++.++++.+.++++++|++   +|.. ...++
T Consensus        19 a~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~-~~~~~   96 (245)
T PRK12824         19 ARELLNDGYRVIATYFSGNDCAKDWFEEYGFTED-QVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGIT-RDSVF   96 (245)
T ss_pred             HHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCcc
Confidence            5678889999999999853 23333333333333 58899999999999999999999999999999   6655 33556


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|++++++|+.+++.+++.++|.|++.+.++||++||..+..+.++
T Consensus        97 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~  148 (245)
T PRK12824         97 KRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFG  148 (245)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCC
Confidence            6788999999999999999999999999998877789999999887765443

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.9e-17  Score=114.38  Aligned_cols=123  Identities=24%  Similarity=0.212  Sum_probs=101.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+... .+...++.  + .++..+.+|+++++++.++++++.+.++++|++   +|.. ...++.
T Consensus        32 a~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~  106 (255)
T PRK06841         32 AELFAAKGARVALLDRSEDV-AEVAAQLL--G-GNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVA-LLAPAE  106 (255)
T ss_pred             HHHHHHCCCEEEEEeCCHHH-HHHHHHhh--C-CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChh
Confidence            56788999999999998753 33333332  2 246789999999999999999999999999999   6655 345667


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+.+.++||++||..+..+.+.
T Consensus       107 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  157 (255)
T PRK06841        107 DVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALER  157 (255)
T ss_pred             hCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCC
Confidence            788999999999999999999999999998877799999999887666543

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.3e-17  Score=115.49  Aligned_cols=117  Identities=19%  Similarity=0.112  Sum_probs=97.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-cchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-NWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-~~~~~   77 (147)
                      ++.|+++|++|++++|+....         .+ .++.++.+|++|+++++++++++.+.++++|++   +|... ...++
T Consensus        26 a~~l~~~G~~v~~~~r~~~~~---------~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~   95 (260)
T PRK06523         26 VARLLEAGARVVTTARSRPDD---------LP-EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGF   95 (260)
T ss_pred             HHHHHHCCCEEEEEeCChhhh---------cC-CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCc
Confidence            567788899999999985421         12 257889999999999999999999999999998   66432 23556


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      .+.+.++|++.+++|+.+++.+++.++|+|.+++.|+||++||..+..+.+
T Consensus        96 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~  146 (260)
T PRK06523         96 AALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP  146 (260)
T ss_pred             ccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC
Confidence            678899999999999999999999999999888778999999998876643

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.7e-17  Score=112.88  Aligned_cols=131  Identities=12%  Similarity=0.017  Sum_probs=99.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-----c
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-----N   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-----~   73 (147)
                      ++.|+++|++|++++|+.++++++.+++      ++.++.+|++|+++++++++++.+   ++|++   +|...     .
T Consensus        17 a~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~ag~~~~~~~~~   87 (223)
T PRK05884         17 AEGFRNDGHKVTLVGARRDDLEVAAKEL------DVDAIVCDNTDPASLEEARGLFPH---HLDTIVNVPAPSWDAGDPR   87 (223)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCcEEecCCCCHHHHHHHHHHHhh---cCcEEEECCCccccCCCCc
Confidence            5678889999999999988777665554      256788999999999999887653   68888   55321     1


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC--CcCCCchhhhccccchhhhhcc
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK--LKNITNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~--~~~~~~~~~~~~~~~~~al~~e  146 (147)
                      ..++.+ +.++|++.+++|+.+++++++.++|.|.+  +|+||++||.+..  ..|..++++...|+.  ++++|
T Consensus        88 ~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~Y~asKaal~~~~~--~la~e  157 (223)
T PRK05884         88 TYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPENPPAGSAEAAIKAALSNWTA--GQAAV  157 (223)
T ss_pred             ccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCCCCCccccHHHHHHHHHHHH--HHHHH
Confidence            112333 46899999999999999999999999964  4899999997631  234455677778877  66665

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.74  E-value=1.1e-17  Score=115.70  Aligned_cols=143  Identities=21%  Similarity=0.213  Sum_probs=121.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +..+..+|++|.++.|+..+++++.++++.... .++.++.+|++|-+++...++++....+++|.+   ||.. ..+.+
T Consensus        50 a~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~-v~g~f  128 (331)
T KOG1210|consen   50 ALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVA-VPGLF  128 (331)
T ss_pred             HHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcc-ccccc
Confidence            566778999999999999999999999876543 237789999999999999999999999999998   8876 45888


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC------chhhhccccchhhhhccC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e~  147 (147)
                      .+.+.++++..+++|+.+.++++++.+|.|++.. .|+|+.+||..+..|..+      .+.+..++..  ++|+|+
T Consensus       129 ~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alrgLa~--~l~qE~  203 (331)
T KOG1210|consen  129 EDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALRGLAE--ALRQEL  203 (331)
T ss_pred             ccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHHHHHH--HHHHHH
Confidence            8999999999999999999999999999999876 579999999988776544      3456666666  788774

>PRK06196 oxidoreductase; Provisional

Probab=99.74  E-value=7.5e-18  Score=119.95  Aligned_cols=116  Identities=21%  Similarity=0.175  Sum_probs=97.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.+++..+++.     ++.++.+|++|.++++++++++.+.++++|++   ||....  + 
T Consensus        42 ~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~--~-  113 (315)
T PRK06196         42 TTRALAQAGAHVIVPARRPDVAREALAGID-----GVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMAC--P-  113 (315)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----hCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCC--C-
Confidence            357788999999999999887777766663     37789999999999999999999988999999   775422  1 


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      ...+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+.
T Consensus       114 ~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~  160 (315)
T PRK06196        114 ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHR  160 (315)
T ss_pred             CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhc
Confidence            24566789999999999999999999999988777899999997653

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.6e-17  Score=113.28  Aligned_cols=124  Identities=21%  Similarity=0.261  Sum_probs=105.0

Q ss_pred             ccccccCCcE-EEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSM-GEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~-v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++ |++++|+.+..++..+++...+. ++.++.+|+++++++.++++.+.+.++++|++   +|.. ...++
T Consensus        23 a~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~  100 (260)
T PRK06198         23 ARAFAERGAAGLVICGRNAEKGEAQAAELEALGA-KAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLT-DRGTI  100 (260)
T ss_pred             HHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcC-CCCCh
Confidence            5678889999 99999998887777777766654 58889999999999999999999999999999   6655 33556


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKN  127 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~  127 (147)
                      .+.+.++|+.++++|+.+++.+++.++|.|.+.+ .|++|++||..+..+.
T Consensus       101 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~  151 (260)
T PRK06198        101 LDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ  151 (260)
T ss_pred             hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC
Confidence            6788999999999999999999999999997653 4899999998876543

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3e-17  Score=114.67  Aligned_cols=134  Identities=25%  Similarity=0.215  Sum_probs=105.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++    ...   .+.++.+|++|++++.++++.+.+.++++|++   +|.. ...++.
T Consensus        18 a~~l~~~G~~V~~~~r~~~~~~~~----~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~   89 (274)
T PRK05693         18 ADAFKAAGYEVWATARKAEDVEAL----AAA---GFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYG-AMGPLL   89 (274)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHH----HHC---CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcc
Confidence            567888999999999987665443    222   36788999999999999999999999999999   6655 345667


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|+..+++|+.+++.+++.++|.|.+. .|+||++||..+..+.+..      +.+...++.  +++.|
T Consensus        90 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~--~l~~e  160 (274)
T PRK05693         90 DGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSD--ALRLE  160 (274)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHHHHHHHH--HHHHH
Confidence            78999999999999999999999999999764 4899999998887665433      334455555  55554

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.7e-17  Score=114.26  Aligned_cols=123  Identities=23%  Similarity=0.236  Sum_probs=102.5

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|+++.|+.+.++++.+..   +. ++.++.+|++|.+++.++++++.+.++++|++   +|.. ...+.
T Consensus        18 la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~   92 (276)
T PRK06482         18 MTERLLARGDRVAATVRRPDALDDLKARY---GD-RLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYG-LFGAA   92 (276)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCccc
Confidence            35678899999999999987666554433   22 58889999999999999999998888999999   6765 33566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      .+.+.+++++.+++|+.+++.++++++|+|++.+.++||++||..+..+.+
T Consensus        93 ~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  143 (276)
T PRK06482         93 EELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYP  143 (276)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCC
Confidence            677889999999999999999999999999887778999999988765544

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.74  E-value=5.2e-17  Score=112.50  Aligned_cols=125  Identities=17%  Similarity=0.100  Sum_probs=102.9

Q ss_pred             ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|+++.+ +.+.++++.+++...+. ++.++.||++|.+++.++++++.+.++++|++   +|.. ...++
T Consensus        26 a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~-~~~~~  103 (258)
T PRK09134         26 ALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGR-RAVALQADLADEAEVRALVARASAALGPITLLVNNASLF-EYDSA  103 (258)
T ss_pred             HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCC-CCCcc
Confidence            5678899999988766 45566667777765554 58899999999999999999999989999999   6655 23556


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      .+.+.++|++.+++|+.+++.+++.+.+.|.+...+.||+++|..+..+.+
T Consensus       104 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p  154 (258)
T PRK09134        104 ASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP  154 (258)
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC
Confidence            678899999999999999999999999999877778999999876654433

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.3e-17  Score=113.11  Aligned_cols=128  Identities=21%  Similarity=0.223  Sum_probs=102.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.        ...+. ++.++.+|++++++++++++.+.+.++++|++   +|.. ...++.
T Consensus        23 a~~l~~~g~~v~~~~r~~~~--------~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~   92 (252)
T PRK07856         23 ARAFLAAGATVVVCGRRAPE--------TVDGR-PAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGS-PYALAA   92 (252)
T ss_pred             HHHHHHCCCEEEEEeCChhh--------hhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcc
Confidence            56788899999999998654        11232 57889999999999999999999999999999   7755 335666


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCCCCcCCCc------hhhhccccc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMGKLKNITN------EWAKGVLSD  139 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~------~~~~~~~~~  139 (147)
                      +.+.++|++.+++|+.+++.+++.+.|.|.+. +.|+||++||..+..+.+..      +.+...+..
T Consensus        93 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~  160 (252)
T PRK07856         93 EASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTR  160 (252)
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHHH
Confidence            78899999999999999999999999999864 45899999999887665432      344455554

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=4e-17  Score=112.75  Aligned_cols=126  Identities=19%  Similarity=0.208  Sum_probs=102.8

Q ss_pred             CccccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-cch
Q 040927            1 MKRSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-NWY   75 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-~~~   75 (147)
                      +++.|+++|++|++++|+. +..++..+.++..+. ++.++.+|++|++++.++++.+.+.++++|++   +|... ...
T Consensus        18 la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~   96 (256)
T PRK12745         18 IARALAAAGFDLAINDRPDDEELAATQQELRALGV-EVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRG   96 (256)
T ss_pred             HHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCC
Confidence            3577889999999999864 455566666665554 68899999999999999999999999999999   66532 234


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC------CCeEEEEcCCCCCCcC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD------SPRIVNASSSMGKLKN  127 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~isS~~~~~~~  127 (147)
                      ++.+.+.++|++.+++|+.+++.+++.+++.|.++.      .++||++||..+..+.
T Consensus        97 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  154 (256)
T PRK12745         97 DLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS  154 (256)
T ss_pred             ChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC
Confidence            567788899999999999999999999999998654      3569999998876554

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.73  E-value=4.6e-17  Score=112.69  Aligned_cols=140  Identities=15%  Similarity=0.122  Sum_probs=106.5

Q ss_pred             CccccccCCcEEEEeecC----hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            1 MKRSNQVHYSMGEATTKD----EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      +++.|+++|++|+++.++    .+..+++.+++...+. ++.++.+|++|++++.++++++.+.++++|++   +|... 
T Consensus        24 ~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-  101 (257)
T PRK12744         24 IARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGA-KAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVL-  101 (257)
T ss_pred             HHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCC-cEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccC-
Confidence            357788899996666543    3455666666665554 58889999999999999999999999999999   67652 


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEE-cCCCCCC-----cCCCchhhhccccchhhhhcc
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNA-SSSMGKL-----KNITNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~i-sS~~~~~-----~~~~~~~~~~~~~~~~al~~e  146 (147)
                      ..++.+.+.++|++.+++|+.+++.+++.++|.|.+.  ++++++ ||..+..     .+..++.+.+.|+.  ++++|
T Consensus       102 ~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  176 (257)
T PRK12744        102 KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLGAFTPFYSAYAGSKAPVEHFTR--AASKE  176 (257)
T ss_pred             CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCEEEEecchhcccCCCcccchhhHHHHHHHHH--HHHHH
Confidence            3566778899999999999999999999999999754  667776 4543322     23445667777777  66665

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.73  E-value=2.2e-17  Score=114.83  Aligned_cols=133  Identities=18%  Similarity=0.117  Sum_probs=101.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc----
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW----   74 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~----   74 (147)
                      ++.|+++|++|++++++....+         . .++.++.+|++|+++++++++.+.+.++++|++   +|.....    
T Consensus        26 a~~l~~~G~~v~~~~~~~~~~~---------~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~   95 (266)
T PRK06171         26 VKELLANGANVVNADIHGGDGQ---------H-ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVD   95 (266)
T ss_pred             HHHHHHCCCEEEEEeCCccccc---------c-CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccc
Confidence            4567778888888877654321         1 147788999999999999999999999999999   6653221    


Q ss_pred             ----hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhh
Q 040927           75 ----YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCR  144 (147)
Q Consensus        75 ----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~  144 (147)
                          .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.+..      +.+...+..  +++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~--~la  173 (266)
T PRK06171         96 EKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTR--SWA  173 (266)
T ss_pred             cccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHHHHHHHHHH--HHH
Confidence                12346789999999999999999999999999988777899999999887654332      344455555  454


Q ss_pred             cc
Q 040927          145 RS  146 (147)
Q Consensus       145 ~e  146 (147)
                      +|
T Consensus       174 ~e  175 (266)
T PRK06171        174 KE  175 (266)
T ss_pred             HH
Confidence            44

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.73  E-value=8.6e-17  Score=111.61  Aligned_cols=125  Identities=23%  Similarity=0.316  Sum_probs=105.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+..+.+++.+++...+. ++.++.+|++|++++..+++.+.++++++|++   +|.. ...++.
T Consensus        18 a~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~   95 (263)
T PRK06181         18 AVRLARAGAQLVLAARNETRLASLAQELADHGG-EALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGIT-MWSRFD   95 (263)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcc-cccchh
Confidence            456788999999999998888888888876664 68899999999999999999999999999999   6654 335566


Q ss_pred             cc-cHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQ-TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +. +.+++++.+++|+.+++.+++.+.|.|.+. .++||++||..+..+.++
T Consensus        96 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~  146 (263)
T PRK06181         96 ELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPT  146 (263)
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCC
Confidence            66 889999999999999999999999998765 489999999887766544

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.73  E-value=8.8e-17  Score=110.35  Aligned_cols=125  Identities=22%  Similarity=0.197  Sum_probs=103.4

Q ss_pred             CccccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|+++.|+. ...+++.+++...+. ++.++.+|++|++++.++++++.+.++++|++   +|.. ...+
T Consensus        21 la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~   98 (245)
T PRK12937         21 IARRLAADGFAVAVNYAGSAAAADELVAEIEAAGG-RAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVM-PLGT   98 (245)
T ss_pred             HHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCC
Confidence            3577889999998887754 445666677766554 68999999999999999999999999999999   6665 3356


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.+.++|++++++|+.+++.+++.++|.|..  .++||++||..+..+.++
T Consensus        99 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~  149 (245)
T PRK12937         99 IADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPG  149 (245)
T ss_pred             hhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCC
Confidence            677889999999999999999999999999865  379999999887766544

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=4.9e-18  Score=119.86  Aligned_cols=95  Identities=12%  Similarity=0.045  Sum_probs=76.5

Q ss_pred             HHHHHHHHHHHhhcCCccEE---ecCCC-cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           48 ASVDSLVHFVSSQFGKLDIL---GGLPD-NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        48 ~~~~~~~~~~~~~~g~id~l---ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                      ++++++++++.+++|++|++   ||... ...++.+++.++|++.+++|+.|+++++++++|+|+++  |+||+++|..+
T Consensus       104 ~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~--G~ii~iss~~~  181 (299)
T PRK06300        104 YTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPG--GSTISLTYLAS  181 (299)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CeEEEEeehhh
Confidence            35899999999999999998   66542 24678899999999999999999999999999999753  78999999888


Q ss_pred             CCcCCCc-------hhhhccccchhhhhcc
Q 040927          124 KLKNITN-------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus       124 ~~~~~~~-------~~~~~~~~~~~al~~e  146 (147)
                      ..+.+..       +++...|+.  +|+.|
T Consensus       182 ~~~~p~~~~~Y~asKaAl~~lt~--~la~e  209 (299)
T PRK06300        182 MRAVPGYGGGMSSAKAALESDTK--VLAWE  209 (299)
T ss_pred             cCcCCCccHHHHHHHHHHHHHHH--HHHHH
Confidence            7665442       245556666  56555

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.73  E-value=6.3e-17  Score=111.32  Aligned_cols=121  Identities=22%  Similarity=0.243  Sum_probs=100.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+++..+++   +. ++.++.+|++|.+++..+++.+.+.++++|++   +|.. ...++.
T Consensus        23 a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~   97 (249)
T PRK06500         23 ARQFLAEGARVAITGRDPASLEAARAEL---GE-SALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVA-KFAPLE   97 (249)
T ss_pred             HHHHHHCCCEEEEecCCHHHHHHHHHHh---CC-ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChh
Confidence            5678899999999999977666655554   33 57889999999999999999999999999998   6654 335667


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|++.+++|+.+++.++++++|.|..  .+++|+++|..+..+.+.
T Consensus        98 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~  146 (249)
T PRK06500         98 DWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPN  146 (249)
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCC
Confidence            7899999999999999999999999999864  378999999877665443

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.73  E-value=4e-17  Score=112.53  Aligned_cols=132  Identities=18%  Similarity=0.136  Sum_probs=103.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.         +...+. ++..+.+|++|++++.++++++.+.++++|++   +|.. ...++.
T Consensus        25 a~~l~~~G~~v~~~~~~~---------~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~   93 (252)
T PRK08220         25 ALAFVEAGAKVIGFDQAF---------LTQEDY-PFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGIL-RMGATD   93 (252)
T ss_pred             HHHHHHCCCEEEEEecch---------hhhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcc
Confidence            566788899999998875         122233 58889999999999999999999999999999   6654 335677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|+..+++|+.+++.+++.++|.|++.+.|+||++||..+..+.++      ++.+...++.  .+++|
T Consensus        94 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  165 (252)
T PRK08220         94 SLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAK--CVGLE  165 (252)
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            788999999999999999999999999998877789999999877655332      3344555554  44443

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.72  E-value=4.3e-17  Score=113.50  Aligned_cols=143  Identities=11%  Similarity=0.058  Sum_probs=102.5

Q ss_pred             CccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHH----HHHHHHHHhhcCCccEE---ecCCC
Q 040927            1 MKRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASV----DSLVHFVSSQFGKLDIL---GGLPD   72 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~----~~~~~~~~~~~g~id~l---ag~~~   72 (147)
                      +++.|+++|++|++++| +.+.++++.+++....+.+..++.+|++|++++    +++++.+.+.+|++|++   ||...
T Consensus        17 ~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~   96 (267)
T TIGR02685        17 IAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFY   96 (267)
T ss_pred             HHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCC
Confidence            36788899999999875 456777777777543323577899999999865    55666666778999998   77542


Q ss_pred             cchhhhcccH-----------HHHHHhHHHhhhhHHHHHHHHHHhhccC------CCCeEEEEcCCCCCCcCCC------
Q 040927           73 NWYKMLTQTY-----------ELAEKCIQTNYYGNKRMCEALIPLLQLS------DSPRIVNASSSMGKLKNIT------  129 (147)
Q Consensus        73 ~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~~~~------  129 (147)
                      + .++.+.+.           ++|.+.+++|+.+++.+++.++|.|...      ..++|++++|..+..+.++      
T Consensus        97 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~~~~~~~Y~a  175 (267)
T TIGR02685        97 P-TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTM  175 (267)
T ss_pred             C-CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCCCcccchhHH
Confidence            2 33333332           3589999999999999999999998643      2468999999887665433      


Q ss_pred             chhhhccccchhhhhcc
Q 040927          130 NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus       130 ~~~~~~~~~~~~al~~e  146 (147)
                      ++++...+..  +|++|
T Consensus       176 sK~a~~~~~~--~la~e  190 (267)
T TIGR02685       176 AKHALEGLTR--SAALE  190 (267)
T ss_pred             HHHHHHHHHH--HHHHH
Confidence            3445566666  56655

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.72  E-value=1.2e-16  Score=109.96  Aligned_cols=124  Identities=23%  Similarity=0.213  Sum_probs=106.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+...+..+++...+. ++.++.+|++|++++.++++++.+.++++|++   +|... ..++.
T Consensus        23 ~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~  100 (251)
T PRK12826         23 AVRLAADGAEVIVVDICGDDAAATAELVEAAGG-KARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFP-LTPFA  100 (251)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChh
Confidence            567888999999999998887877777776654 58899999999999999999999999999998   56553 35666


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC-CcC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK-LKN  127 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~  127 (147)
                      +.+.++++..+++|+.+++.+.+.++|.|.+++.+++|++||..+. .+.
T Consensus       101 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~  150 (251)
T PRK12826        101 EMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGY  150 (251)
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCC
Confidence            7889999999999999999999999999988777899999998876 443

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.72  E-value=9.3e-17  Score=110.17  Aligned_cols=123  Identities=18%  Similarity=0.153  Sum_probs=102.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|+.|++.+|+.+.+++....+   +. ++.++.+|++|.++++++++++.+.++++|++   +|... ..++.
T Consensus        23 a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~   97 (245)
T PRK12936         23 ARLLHAQGAIVGLHGTRVEKLEALAAEL---GE-RVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITK-DGLFV   97 (245)
T ss_pred             HHHHHHCCCEEEEEcCCHHHHHHHHHHh---CC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCccc
Confidence            5678889999999999887777665544   32 57889999999999999999999999999999   66553 35566


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|++.+++|+.+++.+++.+.+.+.+++.++||++||..+..+.+.
T Consensus        98 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  148 (245)
T PRK12936         98 RMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG  148 (245)
T ss_pred             cCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC
Confidence            778899999999999999999999999887766789999999887766543

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1e-16  Score=110.91  Aligned_cols=120  Identities=20%  Similarity=0.264  Sum_probs=99.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc-chhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN-WYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~-~~~~   77 (147)
                      ++.|+++|++|++++|+...+++..+++.      ..++.+|++|+++++++++++.+.++++|++   +|...+ ..++
T Consensus        24 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~   97 (255)
T PRK06057         24 ARRLAAEGATVVVGDIDPEAGKAAADEVG------GLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSI   97 (255)
T ss_pred             HHHHHHcCCEEEEEeCCHHHHHHHHHHcC------CcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCc
Confidence            56788999999999999877666555541      2578899999999999999999888999998   665422 2456


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                      .+.+.+.|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.
T Consensus        98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~  147 (255)
T PRK06057         98 LNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS  147 (255)
T ss_pred             ccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC
Confidence            67888999999999999999999999999988777899999998766554

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.2e-16  Score=110.55  Aligned_cols=119  Identities=18%  Similarity=0.077  Sum_probs=101.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+..+++.+++.  + .++..+.+|++|++++.++++++.++++++|++   +|.... .++.
T Consensus        19 a~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~-~~~~   94 (257)
T PRK07074         19 ARRFLAAGDRVLALDIDAAALAAFADALG--D-ARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARA-ASLH   94 (257)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHhc--C-CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CChh
Confidence            56788899999999999888777777662  2 258899999999999999999999999999998   665533 5666


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      +.+.++|...+++|+.+++.+.+.+++.+.+++.++||++||..+.
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  140 (257)
T PRK07074         95 DTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGM  140 (257)
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc
Confidence            7888999999999999999999999999988777899999997654

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.72  E-value=1.7e-16  Score=109.46  Aligned_cols=126  Identities=20%  Similarity=0.221  Sum_probs=106.2

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+..+++.+++...+. ++..+.+|++|++++..+++.+.+.++++|++   +|.. ...+.
T Consensus        17 l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~-~~~~~   94 (255)
T TIGR01963        17 IALALAAAGANVVVNDLGEAGAEAAAKVATDAGG-SVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQ-HVAPI   94 (255)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCc
Confidence            3567889999999999998888888777766554 68899999999999999999999888899998   5554 23445


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      .+.+.+++++.+++|+.+++.+++.++|.|.+.+.+++|++||..+..+.+
T Consensus        95 ~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~  145 (255)
T TIGR01963        95 EEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP  145 (255)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC
Confidence            567788999999999999999999999999887778999999987766544

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=1.4e-16  Score=109.36  Aligned_cols=126  Identities=25%  Similarity=0.279  Sum_probs=107.1

Q ss_pred             ccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|+++ .|+.+..++..+.+...+. ++.++.+|++|++++.++++.+.+.++++|++   +|.. ...++
T Consensus        22 a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~   99 (247)
T PRK05565         22 AELLAKEGAKVVIAYDINEEAAQELLEEIKEEGG-DAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGIS-NFGLV   99 (247)
T ss_pred             HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcC-CCCCh
Confidence            56788899999998 9988887777777766544 58899999999999999999999988999999   6655 44566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|++.+++|+.+++.+.+.++|.+.+.+.+++|++||..+..+.+.
T Consensus       100 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~  151 (247)
T PRK05565        100 TDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASC  151 (247)
T ss_pred             hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCC
Confidence            7788999999999999999999999999998887789999999877665443

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.7e-16  Score=108.50  Aligned_cols=123  Identities=28%  Similarity=0.241  Sum_probs=103.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++... . ++.++.+|++|++++.++++++.+.++++|++   +|.. ...++.
T Consensus        23 a~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~   99 (237)
T PRK07326         23 AEALLAEGYKVAITARDQKELEEAAAELNNK-G-NVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVG-HFAPVE   99 (237)
T ss_pred             HHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-C-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCchh
Confidence            5667888999999999988888887777654 2 58899999999999999999999999999999   5544 335666


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      +.+.+++++.+++|+.+++.+++.+++.|. .+.++||++||..+..+..
T Consensus       100 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~iv~~ss~~~~~~~~  148 (237)
T PRK07326        100 ELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGGGYIINISSLAGTNFFA  148 (237)
T ss_pred             hCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HCCeEEEEECChhhccCCC
Confidence            788999999999999999999999999983 3458999999988765543

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.71  E-value=1.8e-16  Score=108.57  Aligned_cols=125  Identities=25%  Similarity=0.260  Sum_probs=106.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+..+....++...+. ++.++.+|++|++++.++++++.+.++++|++   +|.. ...++.
T Consensus        22 ~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~   99 (246)
T PRK05653         22 ALRLAADGAKVVIYDSNEEAAEALAAELRAAGG-EARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGIT-RDALLP   99 (246)
T ss_pred             HHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcC-CCCChh
Confidence            567888999999999998888888888876665 58899999999999999999998888999998   5554 235566


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      +.+.++++..++.|+.+++.+++.++|.|.+.+.++||++||..+..+.+
T Consensus       100 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~  149 (246)
T PRK05653        100 RMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNP  149 (246)
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCC
Confidence            77889999999999999999999999999887778999999987765543

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.5e-16  Score=109.81  Aligned_cols=124  Identities=16%  Similarity=0.230  Sum_probs=100.9

Q ss_pred             CccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc------CCccEE---ecC
Q 040927            1 MKRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF------GKLDIL---GGL   70 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~------g~id~l---ag~   70 (147)
                      +++.|+++|++|++. .|+.+..++..+++...+. ++.++.+|++|++++.++++++.+.+      +++|++   +|.
T Consensus        22 la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~  100 (254)
T PRK12746         22 IAMRLANDGALVAIHYGRNKQAADETIREIESNGG-KAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGI  100 (254)
T ss_pred             HHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCC
Confidence            367788999998775 6887777777777765443 58889999999999999999998876      478998   665


Q ss_pred             CCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           71 PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      . ...++.+.+.+.|+..+++|+.+++.+++.++|.|.+.  +++|++||..+..+.+
T Consensus       101 ~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~v~~sS~~~~~~~~  155 (254)
T PRK12746        101 G-TQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVRLGFT  155 (254)
T ss_pred             C-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEECCHHhcCCCC
Confidence            4 33566678899999999999999999999999998654  7899999987765533

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.70  E-value=2.1e-16  Score=122.29  Aligned_cols=127  Identities=14%  Similarity=0.105  Sum_probs=107.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhc-CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++... +..++..+.+|++|++++.++++++.+.+|++|++   ||.. ...++
T Consensus       431 A~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~-~~~~~  509 (676)
T TIGR02632       431 ARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIA-TSSPF  509 (676)
T ss_pred             HHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCC-CCCCc
Confidence            5678899999999999988888777777643 32257789999999999999999999999999998   7765 33566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|+..+++|+.+++.+++.++|.|++.+ +++||++||..+..+.+.
T Consensus       510 ~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~  562 (676)
T TIGR02632       510 EETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN  562 (676)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC
Confidence            7788999999999999999999999999998764 578999999888766544

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.70  E-value=3.9e-16  Score=106.64  Aligned_cols=127  Identities=24%  Similarity=0.277  Sum_probs=104.8

Q ss_pred             CccccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|.++|++|++++|+. +.++...+.+...+. ++.++.+|++|+++++++++.+.+.++++|++   +|.. ...+
T Consensus        14 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~   91 (239)
T TIGR01830        14 IALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGV-KALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGIT-RDNL   91 (239)
T ss_pred             HHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCC
Confidence            3567888999999998875 555566666766665 58899999999999999999999999999999   6654 2245


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.+.+++++.+++|+.+++.+++.+.+.+.+.+.++++++||.++..+.++
T Consensus        92 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~  144 (239)
T TIGR01830        92 LMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG  144 (239)
T ss_pred             hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC
Confidence            56778899999999999999999999999997766789999999887766543

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=2.7e-16  Score=108.29  Aligned_cols=120  Identities=19%  Similarity=0.110  Sum_probs=99.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc----
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW----   74 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~----   74 (147)
                      ++.|+++|++|++++|+.+++++..+++...+. ++..+.+|+++++++.++++.+.+.++++|++   +|.....    
T Consensus        22 a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~  100 (253)
T PRK08217         22 AEYLAQKGAKLALIDLNQEKLEEAVAECGALGT-EVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVK  100 (253)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccc
Confidence            466788999999999998888888888776654 68889999999999999999998888999998   6643210    


Q ss_pred             ---hhh-hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCC
Q 040927           75 ---YKM-LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSM  122 (147)
Q Consensus        75 ---~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~  122 (147)
                         .++ .+.+.++|+.++++|+.+++.+.+.++|.|.+. .++.|+++||..
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~  153 (253)
T PRK08217        101 AKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA  153 (253)
T ss_pred             cccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc
Confidence               112 567889999999999999999999999999765 457899999864

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.69  E-value=3.1e-16  Score=103.96  Aligned_cols=121  Identities=22%  Similarity=0.272  Sum_probs=93.6

Q ss_pred             ccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc--CCccEE---ecCCCcchhhhc
Q 040927            6 QVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF--GKLDIL---GGLPDNWYKMLT   79 (147)
Q Consensus         6 ~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id~l---ag~~~~~~~~~~   79 (147)
                      ...|-.+++. .|+.++..+..+.. .....+++.+..|+++.++++++++++.+-.  ..+|++   +|+........+
T Consensus        25 k~~~i~~iiat~r~~e~a~~~l~~k-~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~  103 (249)
T KOG1611|consen   25 KDKGIEVIIATARDPEKAATELALK-SKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLK  103 (249)
T ss_pred             cCCCcEEEEEecCChHHhhHHHHHh-hccCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccC
Confidence            3457776555 56677652222222 2223479999999999999999999998873  477887   887766677778


Q ss_pred             ccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-----------CCeEEEEcCCCCCCcC
Q 040927           80 QTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-----------SPRIVNASSSMGKLKN  127 (147)
Q Consensus        80 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----------~~~iv~isS~~~~~~~  127 (147)
                      .+.+.|.+.+++|..||+.++|.|+|++++..           ++.|||+||.++..+.
T Consensus       104 ~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~  162 (249)
T KOG1611|consen  104 PSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG  162 (249)
T ss_pred             CcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence            88999999999999999999999999998754           2489999998887653

>PRK08324 short chain dehydrogenase; Validated

Probab=99.68  E-value=5.7e-16  Score=120.18  Aligned_cols=125  Identities=18%  Similarity=0.114  Sum_probs=107.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+.+.++...+++... . ++..+.+|++|++++.++++++.+.+|++|++   +|.. ...++.
T Consensus       439 a~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~-~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~-~~~~~~  515 (681)
T PRK08324        439 AKRLAAEGACVVLADLDEEAAEAAAAELGGP-D-RALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIA-ISGPIE  515 (681)
T ss_pred             HHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-C-cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            5678889999999999998888777777654 2 58899999999999999999999999999998   7765 336677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC-CeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS-PRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|+..+++|+.+++.+++.++|.|++++. |+||++||..+..+.++
T Consensus       516 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~  567 (681)
T PRK08324        516 ETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPN  567 (681)
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCC
Confidence            8899999999999999999999999999988664 89999999888766544

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.68  E-value=3.7e-16  Score=107.71  Aligned_cols=126  Identities=15%  Similarity=0.103  Sum_probs=97.2

Q ss_pred             CccccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCC--cc--EE---ecCCC
Q 040927            1 MKRSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGK--LD--IL---GGLPD   72 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~--id--~l---ag~~~   72 (147)
                      +++.|+++|++|++++|+. +.+++..+   ..+. ++.++.+|++|+++++++++++.+.++.  ++  ++   +|...
T Consensus        17 ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~   92 (251)
T PRK06924         17 IANQLLEKGTHVISISRTENKELTKLAE---QYNS-NLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVA   92 (251)
T ss_pred             HHHHHHhcCCEEEEEeCCchHHHHHHHh---ccCC-ceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecc
Confidence            3678889999999999986 33333222   2233 5888999999999999999998876653  22  33   66654


Q ss_pred             cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCCCCcCCCc
Q 040927           73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMGKLKNITN  130 (147)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~  130 (147)
                      +..++.+.+.++|.+.+++|+.+++.+++.++|.|.+. ..++||++||..+..+.++.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  151 (251)
T PRK06924         93 PIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGW  151 (251)
T ss_pred             cCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCc
Confidence            55677788999999999999999999999999999875 35789999998877665443

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1e-15  Score=105.23  Aligned_cols=127  Identities=20%  Similarity=0.200  Sum_probs=102.8

Q ss_pred             CccccccCCcEEEEeec----ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            1 MKRSNQVHYSMGEATTK----DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r----~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      +++.|+++|++|++++|    +.+..+++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   +|... 
T Consensus        22 la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-   99 (249)
T PRK12827         22 IAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGG-KALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIAT-   99 (249)
T ss_pred             HHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-
Confidence            35678899999988665    44555666666665554 68899999999999999999999888999998   66653 


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHH-HhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALI-PLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      ..++.+.+.++|+..+++|+.+++.+++.+. |.|.+...+++|++||..+..+.++
T Consensus       100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  156 (249)
T PRK12827        100 DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG  156 (249)
T ss_pred             CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC
Confidence            3566778899999999999999999999999 6676666688999999887765443

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=6.6e-16  Score=114.83  Aligned_cols=122  Identities=20%  Similarity=0.177  Sum_probs=97.8

Q ss_pred             ccccccCCcEEEEeecCh--hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDE--KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|+++++..  +.++++.+++      ....+.+|++|+++++++++.+.+.++++|++   +|... ...
T Consensus       227 a~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~-~~~  299 (450)
T PRK08261        227 AEVLARDGAHVVCLDVPAAGEALAAVANRV------GGTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITR-DKT  299 (450)
T ss_pred             HHHHHHCCCEEEEEeCCccHHHHHHHHHHc------CCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCC
Confidence            567888999999998843  3333333332      24578899999999999999999999999999   77653 356


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN  130 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  130 (147)
                      +.+.+.++|+..+++|+.+++++++.+++.+..+++++||++||.++..+.+..
T Consensus       300 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~  353 (450)
T PRK08261        300 LANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQ  353 (450)
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCC
Confidence            778899999999999999999999999997655566899999998887665443

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=8.8e-16  Score=105.86  Aligned_cols=139  Identities=19%  Similarity=0.118  Sum_probs=104.9

Q ss_pred             ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCC-ccEE---ecCCC----
Q 040927            2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGK-LDIL---GGLPD----   72 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~-id~l---ag~~~----   72 (147)
                      ++.|+++|++|+++.+ +.+..+++..++   +. ++.++.+|++|++++.++++++.+.++. +|++   +|...    
T Consensus        22 a~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~   97 (253)
T PRK08642         22 ARAFAREGARVVVNYHQSEDAAEALADEL---GD-RAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDG   97 (253)
T ss_pred             HHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CC-ceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccc
Confidence            5678899999988765 455555444443   22 5888999999999999999999988887 9998   65421    


Q ss_pred             -cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC------CCchhhhccccchhhhhc
Q 040927           73 -NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN------ITNEWAKGVLSDWMRCRR  145 (147)
Q Consensus        73 -~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------~~~~~~~~~~~~~~al~~  145 (147)
                       ...++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.|+||++||..+..+.      ..++.+.+.+..  ++++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~l~~--~la~  175 (253)
T PRK08642         98 DARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTR--NLAA  175 (253)
T ss_pred             cCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHHHHHHHHHHH--HHHH
Confidence             1245677889999999999999999999999999987777999999997665433      223445555555  4544


Q ss_pred             c
Q 040927          146 S  146 (147)
Q Consensus       146 e  146 (147)
                      |
T Consensus       176 ~  176 (253)
T PRK08642        176 E  176 (253)
T ss_pred             H
Confidence            4

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.67  E-value=8.9e-16  Score=104.83  Aligned_cols=123  Identities=18%  Similarity=0.169  Sum_probs=102.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+...+..+++...   ....+.+|++|.+++.++++.+.+.++++|++   +|.. ...++.
T Consensus        24 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~   99 (239)
T PRK12828         24 AAWLAARGARVALIGRGAAPLSQTLPGVPAD---ALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAF-VWGTIA   99 (239)
T ss_pred             HHHHHHCCCeEEEEeCChHhHHHHHHHHhhc---CceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCccc-CcCChh
Confidence            5678889999999999987776666666543   35677899999999999999999999999998   5654 234556


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      ..+.+++++.+++|+.+++.++++++|.+.+++.++||++||..+..+.+
T Consensus       100 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  149 (239)
T PRK12828        100 DGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP  149 (239)
T ss_pred             hCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC
Confidence            77889999999999999999999999999887778999999988765543

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.67  E-value=4.4e-16  Score=106.86  Aligned_cols=132  Identities=14%  Similarity=0.066  Sum_probs=97.4

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++++|+++|++|++++|+.+.++++.+    .+. ++.++.||++|+++++++++++..   .+|.+   +|... ..+.
T Consensus        17 la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~-~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i~~ag~~~-~~~~   87 (240)
T PRK06101         17 LALDYAKQGWQVIACGRNQSVLDELHT----QSA-NIFTLAFDVTDHPGTKAALSQLPF---IPELWIFNAGDCE-YMDD   87 (240)
T ss_pred             HHHHHHhCCCEEEEEECCHHHHHHHHH----hcC-CCeEEEeeCCCHHHHHHHHHhccc---CCCEEEEcCcccc-cCCC
Confidence            367888999999999999876555433    232 578899999999999999887643   35655   66432 2333


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRR  145 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~  145 (147)
                      .+.+.++|++++++|+.+++++++.++|.|.+  +++||++||..+..+.+..      +++.+.|+.  +++.
T Consensus        88 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~l~~  157 (240)
T PRK06101         88 GKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYFAR--TLQL  157 (240)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHHHH--HHHH
Confidence            45788999999999999999999999999854  3689999998877664432      344555555  4443

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.67  E-value=1.4e-15  Score=104.87  Aligned_cols=138  Identities=24%  Similarity=0.235  Sum_probs=105.5

Q ss_pred             ccccccCCcEEEEeecChhh--HHHHHHHHHhcCC-CceEEEEecCCC-HHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYSMGEATTKDEKR--GLAAVEKLKNSGC-DNVIFHLLDVTD-PASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~--~~~~~~~l~~~~~-~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|+++|++|+++.++.+.  .+.+.+... ... ..+....+|+++ .++++.+++.+.+.+|++|++   ||.....
T Consensus        22 a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~  100 (251)
T COG1028          22 ARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPD  100 (251)
T ss_pred             HHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            56788999998888887653  344444433 221 247788899998 999999999999999999977   7766321


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC-------chhhhccccchhhhhcc
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT-------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-------~~~~~~~~~~~~al~~e  146 (147)
                      .++.+.+.++|++.+++|+.+++.+++.+.|.+.++   +||++||..+. +.++       +++++..|++  +++.|
T Consensus       101 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y~~sK~al~~~~~--~l~~e  173 (251)
T COG1028         101 APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAYAASKAALIGLTK--ALALE  173 (251)
T ss_pred             CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchHHHHHHHHHHHHH--HHHHH
Confidence            477788899999999999999999999888888833   99999999886 5433       3456667776  55544

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.67  E-value=3.4e-17  Score=104.72  Aligned_cols=134  Identities=16%  Similarity=-0.009  Sum_probs=103.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      +.+|++.|++|+.+.|+++.+..+.++.   +. -+..+..|+++++.+.+.+    ...+++|++   ||.. ...++.
T Consensus        24 v~~La~aGA~ViAvaR~~a~L~sLV~e~---p~-~I~Pi~~Dls~wea~~~~l----~~v~pidgLVNNAgvA-~~~pf~   94 (245)
T KOG1207|consen   24 VLSLAKAGAQVIAVARNEANLLSLVKET---PS-LIIPIVGDLSAWEALFKLL----VPVFPIDGLVNNAGVA-TNHPFG   94 (245)
T ss_pred             HHHHHhcCCEEEEEecCHHHHHHHHhhC---Cc-ceeeeEecccHHHHHHHhh----cccCchhhhhccchhh-hcchHH
Confidence            5678999999999999998888776664   22 3677888999866554443    344789999   7766 458888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCCCCcC------CCchhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMGKLKN------ITNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~------~~~~~~~~~~~~~~al~~e  146 (147)
                      +++.++++++|++|+.+++...|.....+..+ .+|.|||+||.++..+.      ...+++....++  +|+-|
T Consensus        95 eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk--~lAlE  167 (245)
T KOG1207|consen   95 EITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTK--CLALE  167 (245)
T ss_pred             HHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHH--HHHHh
Confidence            99999999999999999999999966655433 46889999999988774      344567777777  44444

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=1.9e-15  Score=104.08  Aligned_cols=125  Identities=21%  Similarity=0.190  Sum_probs=101.8

Q ss_pred             ccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++|+++|++|++..|+ ..........+...+. ++..+.+|+++++++.++++++.+.++++|++   +|.. ...++
T Consensus        23 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~  100 (252)
T PRK06077         23 AVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGG-EGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLG-LFSPF  100 (252)
T ss_pred             HHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCC-eeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCh
Confidence            56788999998887754 4455555566666554 57889999999999999999999999999999   6764 33566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN  130 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  130 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|.+.  ++||++||..+..+.++.
T Consensus       101 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~  151 (252)
T PRK06077        101 LNVDDKLIDKHISTDFKSVIYCSQELAKEMREG--GAIVNIASVAGIRPAYGL  151 (252)
T ss_pred             hhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC--cEEEEEcchhccCCCCCc
Confidence            678888999999999999999999999998753  799999999887765544

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.66  E-value=5.8e-16  Score=106.35  Aligned_cols=124  Identities=13%  Similarity=0.061  Sum_probs=97.2

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHH-HHhhc---CCccEE---ecCCCc
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHF-VSSQF---GKLDIL---GGLPDN   73 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~---g~id~l---ag~~~~   73 (147)
                      +++.|+++|++|++++|+....  .   ....+ .++.++.+|++|++++.+++.+ +.+.+   +++|++   +|...+
T Consensus        17 ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~   90 (243)
T PRK07023         17 LAEQLLQPGIAVLGVARSRHPS--L---AAAAG-ERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEP   90 (243)
T ss_pred             HHHHHHhCCCEEEEEecCcchh--h---hhccC-CeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCC
Confidence            3567889999999999986431  1   12223 3688899999999999998876 55544   468877   666544


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN  130 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  130 (147)
                      ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++.
T Consensus        91 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  147 (243)
T PRK07023         91 IGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGW  147 (243)
T ss_pred             CCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCc
Confidence            456667889999999999999999999999999988777899999999877665443

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.6e-15  Score=105.12  Aligned_cols=125  Identities=25%  Similarity=0.262  Sum_probs=102.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+..+++.+++...   ++.++.+|++|++++.++++++.+.++++|++   +|......++.
T Consensus        28 a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~  104 (264)
T PRK12829         28 AEAFAEAGARVHVCDVSEAALAATAARLPGA---KVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGID  104 (264)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC---ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcc
Confidence            5678889999999999987766665555322   46889999999999999999999999999999   66543445566


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC-CeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS-PRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~  129 (147)
                      ..+.++|++.+++|+.+++.+++.+++.+...+. +.|+++||..+..+.+.
T Consensus       105 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~  156 (264)
T PRK12829        105 EITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPG  156 (264)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCC
Confidence            7788999999999999999999999999887665 78999999887666544

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.3e-15  Score=103.70  Aligned_cols=133  Identities=17%  Similarity=0.148  Sum_probs=100.8

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.+++..++++. +. ++.++.+|++|++++.+++++    ++++|++   +|.. ...++
T Consensus        13 ~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~ag~~-~~~~~   85 (230)
T PRK07041         13 LARAFAAEGARVTIASRSRDRLAAAARALGG-GA-PVRTAALDITDEAAVDAFFAE----AGPFDHVVITAADT-PGGPV   85 (230)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CC-ceEEEEccCCCHHHHHHHHHh----cCCCCEEEECCCCC-CCCCh
Confidence            3567889999999999998877777666653 33 588899999999999888765    4789998   6654 23566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++++++|+.+++.+++  .+.+.  +.|+||++||..+..+.++.      +++...+..  +++.|
T Consensus        86 ~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  154 (230)
T PRK07041         86 RALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAALEALAR--GLALE  154 (230)
T ss_pred             hhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHH--HHHHH
Confidence            678899999999999999999999  44554  35899999999887665443      334455554  44443

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.65  E-value=3e-15  Score=102.68  Aligned_cols=125  Identities=23%  Similarity=0.246  Sum_probs=102.1

Q ss_pred             ccccccCCcEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++|++|+++.|+.. ..+...+++...+. ++..+.+|+++++++.++++++.+.++++|++   +|.... .+.
T Consensus        22 ~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~-~~~   99 (248)
T PRK05557         22 AERLAAQGANVVINYASSEAGAEALVAEIGALGG-KALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRD-NLL   99 (248)
T ss_pred             HHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC-CCc
Confidence            5667889999988887654 45566666655554 68899999999999999999999988999998   665433 555


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      .+.+.+.+++.+++|+.+++.+.+.++|.+.+.+.+++|++||..+..+.+
T Consensus       100 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~  150 (248)
T PRK05557        100 MRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP  150 (248)
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC
Confidence            567889999999999999999999999999887778999999987765543

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.65  E-value=2.2e-15  Score=104.18  Aligned_cols=119  Identities=16%  Similarity=0.136  Sum_probs=98.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|+++.|+....+++.+.....+. ++.++.+|++|++++.+.+.      +++|++   +|.. ...++.
T Consensus        19 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~------~~id~vi~~ag~~-~~~~~~   90 (257)
T PRK09291         19 ALRLARKGHNVIAGVQIAPQVTALRAEAARRGL-ALRVEKLDLTDAIDRAQAAE------WDVDVLLNNAGIG-EAGAVV   90 (257)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cceEEEeeCCCHHHHHHHhc------CCCCEEEECCCcC-CCcCcc
Confidence            567888999999999998777777666665554 58899999999988876542      378988   6665 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      +.+.++|+..+++|+.+++.+++.++|.+.+.+.++||++||..+..+.+
T Consensus        91 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~  140 (257)
T PRK09291         91 DIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGP  140 (257)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCC
Confidence            88999999999999999999999999999888778999999988766543

>PRK09135 pteridine reductase; Provisional

Probab=99.63  E-value=6.1e-15  Score=101.34  Aligned_cols=126  Identities=17%  Similarity=0.075  Sum_probs=99.9

Q ss_pred             CccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++++|+++|++|++++|+ ....+++.+.+.......+.++.+|++|.+++.++++.+.+.++++|++   +|.. ...+
T Consensus        22 l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~  100 (249)
T PRK09135         22 IARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSF-YPTP  100 (249)
T ss_pred             HHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCC
Confidence            356788999999999986 4455666666655433357889999999999999999999999999998   6654 2245


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      +.+.+.++++..+++|+.+++.+.+++.|.+.+. ++.+++++|..+..+.+
T Consensus       101 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  151 (249)
T PRK09135        101 LGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLK  151 (249)
T ss_pred             hhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCC
Confidence            5667788999999999999999999999998765 37888888866655443

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=8e-15  Score=100.55  Aligned_cols=125  Identities=22%  Similarity=0.203  Sum_probs=102.2

Q ss_pred             ccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++|++|++..|+ ....+.+.+.+...+. ++.++.+|++|++++.++++++.+.++.+|++   +|.. ...++
T Consensus        23 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~-~~~~~  100 (249)
T PRK12825         23 ALRLARAGADVVVHYRSDEEAAEELVEAVEALGR-RAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIF-EDKPL  100 (249)
T ss_pred             HHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccC-CCCCh
Confidence            56788899998776665 4445555566655554 58899999999999999999998888999999   6654 44566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      .+.+.++|+..+++|+.+++.+++.++|.+.+.+.+++|++||..+..+.+
T Consensus       101 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~  151 (249)
T PRK12825        101 ADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWP  151 (249)
T ss_pred             hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCC
Confidence            677889999999999999999999999999887778999999988776543

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=9.9e-16  Score=104.63  Aligned_cols=127  Identities=19%  Similarity=0.182  Sum_probs=94.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+....         .. .++..+.+|++++      ++++.+.++++|++   +|......++.
T Consensus        22 a~~l~~~G~~v~~~~r~~~~~---------~~-~~~~~~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~   85 (235)
T PRK06550         22 ARAFLAQGAQVYGVDKQDKPD---------LS-GNFHFLQLDLSDD------LEPLFDWVPSVDILCNTAGILDDYKPLL   85 (235)
T ss_pred             HHHHHHCCCEEEEEeCCcccc---------cC-CcEEEEECChHHH------HHHHHHhhCCCCEEEECCCCCCCCCCcc
Confidence            567888999999999875321         12 2578899999887      44555566899998   66543335667


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+.      .+.+...+..  ++++|
T Consensus        86 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~~  157 (235)
T PRK06550         86 DTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTK--QLALD  157 (235)
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHH--HHHHH
Confidence            788999999999999999999999999998877799999999887665433      2344445554  45444

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.60  E-value=6.4e-15  Score=100.53  Aligned_cols=107  Identities=11%  Similarity=0.040  Sum_probs=89.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+...         ...   ..++.+|++|++++.++++++.+.+ ++|++   +|.. ...++.
T Consensus        20 a~~l~~~G~~v~~~~r~~~~---------~~~---~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~-~~~~~~   85 (234)
T PRK07577         20 SLRLANLGHQVIGIARSAID---------DFP---GELFACDLADIEQTAATLAQINEIH-PVDAIVNNVGIA-LPQPLG   85 (234)
T ss_pred             HHHHHHCCCEEEEEeCCccc---------ccC---ceEEEeeCCCHHHHHHHHHHHHHhC-CCcEEEECCCCC-CCCChH
Confidence            56788899999999998643         111   2467899999999999999998876 68988   6655 335666


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      +.+.++|++.+++|+.+++.+.+.++|.|++++.++||++||..
T Consensus        86 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~  129 (234)
T PRK07577         86 KIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA  129 (234)
T ss_pred             HCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc
Confidence            78899999999999999999999999999888778999999975

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.60  E-value=8e-15  Score=97.94  Aligned_cols=99  Identities=18%  Similarity=0.115  Sum_probs=78.7

Q ss_pred             EEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeE
Q 040927           39 FHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRI  115 (147)
Q Consensus        39 ~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~i  115 (147)
                      .+.||++|++++++++++    ++++|++   +|.. ...++.+.+.++|++.+++|+.+++++++.++|+|.+.  |+|
T Consensus        35 ~~~~D~~~~~~~~~~~~~----~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g~i  107 (199)
T PRK07578         35 DVQVDITDPASIRALFEK----VGKVDAVVSAAGKV-HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG--GSF  107 (199)
T ss_pred             ceEecCCChHHHHHHHHh----cCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CeE
Confidence            367999999999888765    4789998   6765 44677788999999999999999999999999999753  789


Q ss_pred             EEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927          116 VNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus       116 v~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++||..+..+.+..      +++...|..  +++.|
T Consensus       108 v~iss~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  142 (199)
T PRK07578        108 TLTSGILSDEPIPGGASAATVNGALEGFVK--AAALE  142 (199)
T ss_pred             EEEcccccCCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            999998887665443      345566665  66655

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.59  E-value=3.6e-15  Score=98.40  Aligned_cols=125  Identities=20%  Similarity=0.138  Sum_probs=94.1

Q ss_pred             ccccccCCc-EEEEeecCh---hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYS-MGEATTKDE---KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~-~v~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      +++|+++|. +|++++|+.   ...++..++++..+. ++.++.||++|++++.++++.+.+.+++++++   +|.. ..
T Consensus        17 a~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~-~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~-~~   94 (181)
T PF08659_consen   17 ARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGA-RVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVL-AD   94 (181)
T ss_dssp             HHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT--EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE--------
T ss_pred             HHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCC-ceeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeee-cc
Confidence            566777765 699999983   345678888888876 79999999999999999999999999999998   6665 44


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCchh
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEW  132 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  132 (147)
                      .++.+.+.++++.++...+.+...+.+.+.+    ..-..+|.+||+++..|.+++..
T Consensus        95 ~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~  148 (181)
T PF08659_consen   95 APIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGGPGQSA  148 (181)
T ss_dssp             B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHH
T ss_pred             cccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccCcchHh
Confidence            7888999999999999999999999998765    23357999999999988887764

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK08017 oxidoreductase; Provisional

Probab=99.58  E-value=2.8e-14  Score=98.55  Aligned_cols=119  Identities=22%  Similarity=0.208  Sum_probs=96.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc-CCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++.+    ...   .+..+.||++|.+++.++++.+.+.. +.+|++   +|.. ...++
T Consensus        19 a~~l~~~g~~v~~~~r~~~~~~~~----~~~---~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~-~~~~~   90 (256)
T PRK08017         19 ALELKRRGYRVLAACRKPDDVARM----NSL---GFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFG-VYGPL   90 (256)
T ss_pred             HHHHHHCCCEEEEEeCCHHHhHHH----HhC---CCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCC-Cccch
Confidence            567888999999999998765543    222   36778999999999999998887654 678887   5654 33566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      .+.+.+++++.+++|+.|++.+++.++|.|.+.+.++||++||..+..+.+
T Consensus        91 ~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~  141 (256)
T PRK08017         91 STISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTP  141 (256)
T ss_pred             hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCC
Confidence            788999999999999999999999999999888778999999987776543

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.58  E-value=2.1e-14  Score=98.55  Aligned_cols=116  Identities=17%  Similarity=0.084  Sum_probs=91.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+..+++.+..      ...++.+|+++++++.++++.    ++++|++   +|.. ...+..
T Consensus        26 a~~l~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~----~~~~d~vi~~ag~~-~~~~~~   94 (245)
T PRK07060         26 AVALAQRGARVVAAARNAAALDRLAGET------GCEPLRLDVGDDAAIRAALAA----AGAFDGLVNCAGIA-SLESAL   94 (245)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCeEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCC-CCCChh
Confidence            4567889999999999987666554433      256788999999888777654    4789998   6654 335556


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNI  128 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~  128 (147)
                      +.+.++|++.+++|+.+++.+++.+++.+.+.. .++||++||..+..+.+
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  145 (245)
T PRK07060         95 DMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP  145 (245)
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC
Confidence            788899999999999999999999999987554 47999999988766543

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.58  E-value=1e-14  Score=99.19  Aligned_cols=116  Identities=20%  Similarity=0.207  Sum_probs=92.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc-chhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN-WYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~-~~~~   77 (147)
                      ++.|+++|++|++++|+.+..+++    ...+  ++.++.+|++|+++++++++.+.+  +++|++   +|.... ..++
T Consensus        18 a~~l~~~G~~V~~~~r~~~~~~~~----~~~~--~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~~ag~~~~~~~~~   89 (225)
T PRK08177         18 VDRLLERGWQVTATVRGPQQDTAL----QALP--GVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFVNAGISGPAHQSA   89 (225)
T ss_pred             HHHHHhCCCEEEEEeCCCcchHHH----Hhcc--ccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEEcCcccCCCCCCc
Confidence            577889999999999997665433    2222  467788999999999999988754  479998   665422 2456


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                      .+.+.++++..+++|+.+++.+.+.++|.+... .+.++++||..+..+
T Consensus        90 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~  137 (225)
T PRK08177         90 ADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVE  137 (225)
T ss_pred             ccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccc
Confidence            678899999999999999999999999998754 478999999877654

>PRK08264 short chain dehydrogenase; Validated

Probab=99.58  E-value=2.2e-14  Score=98.17  Aligned_cols=116  Identities=25%  Similarity=0.248  Sum_probs=94.3

Q ss_pred             ccccccCCc-EEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYS-MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~-~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|+ +|++++|+.+.+++       .+. ++.++.+|++|++++.++++.    ++++|++   +|......++
T Consensus        23 a~~l~~~G~~~V~~~~r~~~~~~~-------~~~-~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~   90 (238)
T PRK08264         23 VEQLLARGAAKVYAAARDPESVTD-------LGP-RVVPLQLDVTDPASVAAAAEA----ASDVTILVNNAGIFRTGSLL   90 (238)
T ss_pred             HHHHHHCCcccEEEEecChhhhhh-------cCC-ceEEEEecCCCHHHHHHHHHh----cCCCCEEEECCCcCCCCCcc
Confidence            567888999 89999998765443       233 588999999999998877654    4689998   6663344667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|...+++|+.+++.+.+.++|.+.+.+.+++|++||..+..+.++
T Consensus        91 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~  142 (238)
T PRK08264         91 LEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPN  142 (238)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCC
Confidence            7889999999999999999999999999998877789999999887765443

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=7.8e-14  Score=95.40  Aligned_cols=117  Identities=15%  Similarity=0.086  Sum_probs=94.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+.+..+++.+++...+  ++..+.+|+++++++.++++++...++++|.+   +|.... .+..
T Consensus        22 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~-~~~~   98 (238)
T PRK05786         22 AYFALKEGAQVCINSRNENKLKRMKKTLSKYG--NIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVE-DTVE   98 (238)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCC-CchH
Confidence            56788899999999999888777766665543  47889999999999999999998888899988   554322 2222


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL  125 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  125 (147)
                        +.++++..+++|+.+++.+.+.++|.|.+  ++++|++||..+..
T Consensus        99 --~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~  141 (238)
T PRK05786         99 --EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIY  141 (238)
T ss_pred             --HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcc
Confidence              23889999999999999999999999865  37899999987643

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.56  E-value=4.4e-14  Score=95.90  Aligned_cols=115  Identities=25%  Similarity=0.219  Sum_probs=89.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-cchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-NWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-~~~~~   77 (147)
                      ++.|+++|++|++++|+.+..+++    ...   .+.++.+|+++.++++++++.+..  +++|++   +|... ...++
T Consensus        18 a~~L~~~G~~v~~~~r~~~~~~~~----~~~---~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~~ag~~~~~~~~~   88 (222)
T PRK06953         18 VRQYRADGWRVIATARDAAALAAL----QAL---GAEALALDVADPASVAGLAWKLDG--EALDAAVYVAGVYGPRTEGV   88 (222)
T ss_pred             HHHHHhCCCEEEEEECCHHHHHHH----Hhc---cceEEEecCCCHHHHHHHHHHhcC--CCCCEEEECCCcccCCCCCc
Confidence            567888999999999997665543    222   256789999999999998777643  478998   66542 22445


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                      .+.+.++|+..+++|+.+++.+++.++|+|.+. +|+++++||..+..+
T Consensus        89 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~  136 (222)
T PRK06953         89 EPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIG  136 (222)
T ss_pred             ccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccc
Confidence            567899999999999999999999999998664 588999999877554

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.56  E-value=5.8e-14  Score=93.50  Aligned_cols=127  Identities=19%  Similarity=0.109  Sum_probs=102.9

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC---cc
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD---NW   74 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~---~~   74 (147)
                      +++.|+++|+++.+++.++ ++++-.+++.+.-+ ...+++||+++.+++++++.++.+++|++|++   .|..+   -.
T Consensus        24 IAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~-s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~  101 (259)
T COG0623          24 IAKALAEQGAELAFTYQGE-RLEKRVEELAEELG-SDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELK  101 (259)
T ss_pred             HHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc-CCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhC
Confidence            3678899999999999987 55555555544332 36789999999999999999999999999999   33321   13


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE  131 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  131 (147)
                      +.+.+++.+.|...+++...+...+.+.+.|.|..  +|+||.+|...+.+..|...
T Consensus       102 G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnYN  156 (259)
T COG0623         102 GDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNYN  156 (259)
T ss_pred             CcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCCc
Confidence            56777999999999999999999999999999976  48999999888776665543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.56  E-value=2.3e-14  Score=97.89  Aligned_cols=130  Identities=23%  Similarity=0.247  Sum_probs=92.7

Q ss_pred             ccccccC--CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC----
Q 040927            2 KRSNQVH--YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD----   72 (147)
Q Consensus         2 ~~~l~~~--G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~----   72 (147)
                      ++.|+++  ++.|++..|+...  .    .  .. .++.++.||++|+++++++    .++++++|++   +|...    
T Consensus        17 a~~l~~~~~~~~v~~~~~~~~~--~----~--~~-~~~~~~~~Dls~~~~~~~~----~~~~~~id~li~~aG~~~~~~~   83 (235)
T PRK09009         17 VKQLLERYPDATVHATYRHHKP--D----F--QH-DNVQWHALDVTDEAEIKQL----SEQFTQLDWLINCVGMLHTQDK   83 (235)
T ss_pred             HHHHHHhCCCCEEEEEccCCcc--c----c--cc-CceEEEEecCCCHHHHHHH----HHhcCCCCEEEECCcccccccc
Confidence            4556666  4556666665421  1    1  12 2578899999999988774    3456899998   67542    


Q ss_pred             -cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC---------cCCCchhhhccccchhh
Q 040927           73 -NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL---------KNITNEWAKGVLSDWMR  142 (147)
Q Consensus        73 -~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---------~~~~~~~~~~~~~~~~a  142 (147)
                       +..++.+.+.+.|++.+++|+.+++.+++.++|.|.+++.++|+++||..+..         .+..++.+...|..  +
T Consensus        84 ~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~~~--~  161 (235)
T PRK09009         84 GPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLK--T  161 (235)
T ss_pred             CcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHHHHH--H
Confidence             12456778889999999999999999999999999887778999999866533         23334556666666  6


Q ss_pred             hhcc
Q 040927          143 CRRS  146 (147)
Q Consensus       143 l~~e  146 (147)
                      |++|
T Consensus       162 la~e  165 (235)
T PRK09009        162 LSIE  165 (235)
T ss_pred             HHHH
Confidence            6654

>PRK12742 oxidoreductase; Provisional

Probab=99.56  E-value=6e-14  Score=95.91  Aligned_cols=110  Identities=16%  Similarity=0.103  Sum_probs=84.7

Q ss_pred             ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|+++.+ +.+..+++.+++      ....+.+|++|++++.+++.    .++++|++   +|.. ...+.
T Consensus        23 a~~l~~~G~~v~~~~~~~~~~~~~l~~~~------~~~~~~~D~~~~~~~~~~~~----~~~~id~li~~ag~~-~~~~~   91 (237)
T PRK12742         23 VRRFVTDGANVRFTYAGSKDAAERLAQET------GATAVQTDSADRDAVIDVVR----KSGALDILVVNAGIA-VFGDA   91 (237)
T ss_pred             HHHHHHCCCEEEEecCCCHHHHHHHHHHh------CCeEEecCCCCHHHHHHHHH----HhCCCcEEEECCCCC-CCCCc
Confidence            5678899999988876 444444443332      25677899999988877664    35789998   6654 23455


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|..  .|+||++||..+.
T Consensus        92 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~  136 (237)
T PRK12742         92 LELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGD  136 (237)
T ss_pred             ccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccc
Confidence            57788999999999999999999999999864  3799999998774

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.55  E-value=6e-15  Score=94.49  Aligned_cols=123  Identities=20%  Similarity=0.213  Sum_probs=102.1

Q ss_pred             cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC-----Ccc
Q 040927            3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP-----DNW   74 (147)
Q Consensus         3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~-----~~~   74 (147)
                      ..|+++|+.|++.+-..++.++..+++   |+ ++.+.++|+++++++...+...+.+||++|.+   +|+.     ...
T Consensus        27 erlakqgasv~lldlp~skg~~vakel---g~-~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~  102 (260)
T KOG1199|consen   27 ERLAKQGASVALLDLPQSKGADVAKEL---GG-KVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNV  102 (260)
T ss_pred             HHHHhcCceEEEEeCCcccchHHHHHh---CC-ceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeee
Confidence            457889999999998888888888887   44 79999999999999999999999999999998   6642     122


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC------CCeEEEEcCCCCCCcCCC
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD------SPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~isS~~~~~~~~~  129 (147)
                      ..-...+.|++++.+++|+.|+|+.++.-.-.|-++.      +|.|||..|+++..+..+
T Consensus       103 ~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g  163 (260)
T KOG1199|consen  103 QKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG  163 (260)
T ss_pred             cccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc
Confidence            3334567899999999999999999999988886542      589999999998766433

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.2e-14  Score=100.11  Aligned_cols=112  Identities=19%  Similarity=0.194  Sum_probs=88.3

Q ss_pred             ccccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+. ...+.+.++++..+. ++..+.+|++|++++.++++++.+.++.+|++   +|.... .  
T Consensus        23 ~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~-~--   98 (248)
T PRK07806         23 AKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGG-RASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGME-S--   98 (248)
T ss_pred             HHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCC-C--
Confidence            567888999999999975 346666667766554 58889999999999999999999888999987   554311 1  


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                       .   .+++..+++|+.+++++++.+.|.|.+  +++||++||..+
T Consensus        99 -~---~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~  138 (248)
T PRK07806         99 -G---MDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQA  138 (248)
T ss_pred             -C---CCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchh
Confidence             1   124567899999999999999999864  378999999654

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.53  E-value=9.4e-15  Score=100.41  Aligned_cols=98  Identities=29%  Similarity=0.371  Sum_probs=80.2

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+..+     +       ..++.||++|.+++.++++++.   +++|++   ||....    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~-------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~----   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L-------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT----   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h-------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC----
Confidence            57889999999999999876531     1       2457899999999999988764   689998   765421    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                           +.|+..+++|+.+++.+++.++|.|.+.  |+||++||.++.
T Consensus        62 -----~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~Iv~isS~~~~  101 (241)
T PRK12428         62 -----APVELVARVNFLGLRHLTEALLPRMAPG--GAIVNVASLAGA  101 (241)
T ss_pred             -----CCHHHhhhhchHHHHHHHHHHHHhccCC--cEEEEeCcHHhh
Confidence                 2478999999999999999999999653  899999998875

>PRK06720 hypothetical protein; Provisional

Probab=99.53  E-value=2.1e-13  Score=88.93  Aligned_cols=118  Identities=15%  Similarity=0.086  Sum_probs=92.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. +..++.+|+++.+++.++++++.+.+|++|++   +|......++.
T Consensus        33 a~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~  111 (169)
T PRK06720         33 ALLLAKQGAKVIVTDIDQESGQATVEEITNLGG-EALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFS  111 (169)
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCccc
Confidence            566888999999999998888777788876554 57788999999999999999999999999999   77664445555


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-------CCeEEEEcCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-------SPRIVNASSSMG  123 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-------~~~iv~isS~~~  123 (147)
                      +.+.+++.   .+|+.+++..++.+.+.|.+++       .|++..|||.+.
T Consensus       112 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720        112 RQQENDSN---VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             ccchhHhh---ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            55555533   6778888889999999887653       467777776553

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.53  E-value=8.4e-14  Score=118.68  Aligned_cols=100  Identities=20%  Similarity=0.139  Sum_probs=83.4

Q ss_pred             HHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHH
Q 040927           25 AVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCE  101 (147)
Q Consensus        25 ~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  101 (147)
                      +.+++...|. ++.++.||++|.+++.+++.++.+. +++|++   ||.. ....+.+.+.++|++++++|+.|++++++
T Consensus      2085 ~la~l~~~G~-~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~-~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~ 2161 (2582)
T TIGR02813      2085 ALAAFKAAGA-SAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVL-ADKHIQDKTLEEFNAVYGTKVDGLLSLLA 2161 (2582)
T ss_pred             HHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccC-CCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            3444555565 6889999999999999999999877 789999   7776 34678889999999999999999999999


Q ss_pred             HHHHhhccCCCCeEEEEcCCCCCCcCCCch
Q 040927          102 ALIPLLQLSDSPRIVNASSSMGKLKNITNE  131 (147)
Q Consensus       102 ~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  131 (147)
                      .+.+.+.    +.||++||++|..+.+++.
T Consensus      2162 al~~~~~----~~IV~~SSvag~~G~~gqs 2187 (2582)
T TIGR02813      2162 ALNAENI----KLLALFSSAAGFYGNTGQS 2187 (2582)
T ss_pred             HHHHhCC----CeEEEEechhhcCCCCCcH
Confidence            9887653    4699999999998876654

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.50  E-value=1.9e-13  Score=88.98  Aligned_cols=121  Identities=18%  Similarity=0.088  Sum_probs=93.2

Q ss_pred             ccccccCCc-EEEEeecChhhHHHH---HHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYS-MGEATTKDEKRGLAA---VEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~-~v~l~~r~~~~~~~~---~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|.++|+ .|++++|+....+..   .++++..+. ++.++.+|++++++++++++++...++++|.+   +|.. ..
T Consensus        17 ~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~-~~   94 (180)
T smart00822       17 ARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGA-EVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVL-DD   94 (180)
T ss_pred             HHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccC-Cc
Confidence            456777886 588888876443332   345554454 68889999999999999999998888999999   6654 33


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      .++.+.+.++++..+++|+.+++.+.+.+.+    .+.++++++||..+..+.+
T Consensus        95 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~~~~  144 (180)
T smart00822       95 GLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVLGNP  144 (180)
T ss_pred             cccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhcCCC
Confidence            5566788899999999999999999999843    3457899999988776653

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.46  E-value=9.1e-13  Score=89.18  Aligned_cols=117  Identities=26%  Similarity=0.259  Sum_probs=97.9

Q ss_pred             cEEEEeecChhhHHHHHHHHHhcCC---CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc---------
Q 040927           10 SMGEATTKDEKRGLAAVEKLKNSGC---DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW---------   74 (147)
Q Consensus        10 ~~v~l~~r~~~~~~~~~~~l~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~---------   74 (147)
                      .+++++.|+.+++++....+.+..+   .++.++.+|++|..++.++.+++.++|.++|.+   ||..+..         
T Consensus        33 ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf  112 (341)
T KOG1478|consen   33 LTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVF  112 (341)
T ss_pred             EEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHH
Confidence            3588889999999999999987654   247889999999999999999999999999999   6632111         


Q ss_pred             -----------------hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           75 -----------------YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        75 -----------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                                       ......+.+++..+|++|++|+|.+.+.+.|++..++...+|.+||..+...
T Consensus       113 ~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~~~~~~lvwtSS~~a~kk  181 (341)
T KOG1478|consen  113 GLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCHSDNPQLVWTSSRMARKK  181 (341)
T ss_pred             HHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhcCCCCeEEEEeecccccc
Confidence                             1122456788999999999999999999999999988889999999887654

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.44  E-value=6.7e-13  Score=91.55  Aligned_cols=108  Identities=15%  Similarity=0.067  Sum_probs=75.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.....+   .. ..+  ....+.+|++|.+++.+       .++++|++   ||.. .   ..
T Consensus        31 a~~l~~~G~~Vi~~~r~~~~~~~---~~-~~~--~~~~~~~D~~~~~~~~~-------~~~~iDilVnnAG~~-~---~~   93 (245)
T PRK12367         31 TKAFRAKGAKVIGLTHSKINNSE---SN-DES--PNEWIKWECGKEESLDK-------QLASLDVLILNHGIN-P---GG   93 (245)
T ss_pred             HHHHHHCCCEEEEEECCchhhhh---hh-ccC--CCeEEEeeCCCHHHHHH-------hcCCCCEEEECCccC-C---cC
Confidence            56788999999999998622111   11 112  13567899999987653       35789999   7754 2   12


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC---CCCeEEEEcCCCCCCc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS---DSPRIVNASSSMGKLK  126 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~iv~isS~~~~~~  126 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.++   +++.+++.+|.++..+
T Consensus        94 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~  144 (245)
T PRK12367         94 RQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP  144 (245)
T ss_pred             CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC
Confidence            46789999999999999999999999999763   2233444456555433

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.39  E-value=3.6e-12  Score=86.50  Aligned_cols=116  Identities=19%  Similarity=0.213  Sum_probs=89.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++ ++|++++|+.+..++..++.    . .+.++.+|++|++++.++++.+    +++|++   +|.. ...++.
T Consensus        20 ~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~D~~~~~~~~~~~~~~----~~id~vi~~ag~~-~~~~~~   88 (227)
T PRK08219         20 ARELAPT-HTLLLGGRPAERLDELAAEL----P-GATPFPVDLTDPEAIAAAVEQL----GRLDVLVHNAGVA-DLGPVA   88 (227)
T ss_pred             HHHHHhh-CCEEEEeCCHHHHHHHHHHh----c-cceEEecCCCCHHHHHHHHHhc----CCCCEEEECCCcC-CCCCcc
Confidence            4567777 89999999977655544332    1 3778899999999888876543    578998   6654 334566


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|++.+++|+.+++.+.+.+++.+.++. +++|++||..+..+.++
T Consensus        89 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~~~  138 (227)
T PRK08219         89 ESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRANPG  138 (227)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcCCC
Confidence            778899999999999999999999999988764 78999999887655433

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.32  E-value=2.9e-11  Score=88.60  Aligned_cols=104  Identities=19%  Similarity=0.168  Sum_probs=77.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+++++.   +..... .+..+.+|++|++++.+.       ++++|++   +|....    .
T Consensus       195 A~~La~~G~~Vi~l~r~~~~l~~~---~~~~~~-~v~~v~~Dvsd~~~v~~~-------l~~IDiLInnAGi~~~----~  259 (406)
T PRK07424        195 LKELHQQGAKVVALTSNSDKITLE---INGEDL-PVKTLHWQVGQEAALAEL-------LEKVDILIINHGINVH----G  259 (406)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHH---HhhcCC-CeEEEEeeCCCHHHHHHH-------hCCCCEEEECCCcCCC----C
Confidence            567888999999999987655432   222222 367888999998876543       3679988   675422    2


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC----CeEEEEcC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS----PRIVNASS  120 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~iv~isS  120 (147)
                      +.+.+++++.+++|+.|++.+++.++|.|++++.    +.+|++|+
T Consensus       260 ~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss  305 (406)
T PRK07424        260 ERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE  305 (406)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc
Confidence            5678999999999999999999999999987642    34666665

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.15  E-value=6.1e-10  Score=74.45  Aligned_cols=92  Identities=20%  Similarity=0.152  Sum_probs=75.9

Q ss_pred             EEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh--cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-
Q 040927           38 IFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML--TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-  111 (147)
Q Consensus        38 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-  111 (147)
                      .....|+++..-+..+++..+...|..|++   ||...+.....  ..+.++|++.+++|+++++.+.+.++|.++++. 
T Consensus        57 v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~  136 (253)
T KOG1204|consen   57 VHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPV  136 (253)
T ss_pred             ceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCc
Confidence            344567777777788888888888888888   88776655544  678899999999999999999999999999883 


Q ss_pred             CCeEEEEcCCCCCCcCCC
Q 040927          112 SPRIVNASSSMGKLKNIT  129 (147)
Q Consensus       112 ~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+||+||.++..|+++
T Consensus       137 ~~~vVnvSS~aav~p~~~  154 (253)
T KOG1204|consen  137 NGNVVNVSSLAAVRPFSS  154 (253)
T ss_pred             cCeEEEecchhhhccccH
Confidence            689999999999988743

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.12  E-value=6.3e-10  Score=78.01  Aligned_cols=140  Identities=15%  Similarity=0.049  Sum_probs=99.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCc--------------cEE
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKL--------------DIL   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i--------------d~l   67 (147)
                      +..|.++|+.|+++..+.+.......+    +...+.....|..++.++...+.++.+.+...              ..+
T Consensus        21 a~DLeRRGFIV~v~~~~~ed~~~ve~e----~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~sv   96 (299)
T PF08643_consen   21 ALDLERRGFIVYVTVSSAEDEKYVESE----DRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSV   96 (299)
T ss_pred             HHHHhhCCeEEEEEeCCHHHHHHHHhc----cCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEE
Confidence            456789999999999987654433222    22247777788888888888887777654322              222


Q ss_pred             ---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhcc---CCCCeEEEEcCCCCCCcCCCch------hhhc
Q 040927           68 ---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQL---SDSPRIVNASSSMGKLKNITNE------WAKG  135 (147)
Q Consensus        68 ---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~---~~~~~iv~isS~~~~~~~~~~~------~~~~  135 (147)
                         .....+.+|+..++.++|.+.++.|+..++.++|.++|+|+.   .+...|++.-|+.+....|-..      .+..
T Consensus        97 i~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~~PfhspE~~~~~al~  176 (299)
T PF08643_consen   97 IFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLNPPFHSPESIVSSALS  176 (299)
T ss_pred             EEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccCCCccCHHHHHHHHHH
Confidence               223335678889999999999999999999999999999998   4333444444766665544432      4677


Q ss_pred             cccchhhhhccC
Q 040927          136 VLSDWMRCRRSI  147 (147)
Q Consensus       136 ~~~~~~al~~e~  147 (147)
                      +|..  +||+|+
T Consensus       177 ~~~~--~LrrEl  186 (299)
T PF08643_consen  177 SFFT--SLRREL  186 (299)
T ss_pred             HHHH--HHHHHh
Confidence            7777  899985

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=98.96  E-value=5e-09  Score=74.96  Aligned_cols=109  Identities=14%  Similarity=0.070  Sum_probs=77.1

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|.++|++|+++.|+....+.....+...+ ..++.++.+|++|++++.++++       .+|++   ||....   
T Consensus        21 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vih~A~~~~~---   90 (325)
T PLN02989         21 IVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------GCETVFHTASPVAI---   90 (325)
T ss_pred             HHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------CCCEEEEeCCCCCC---
Confidence            356788899999999888765444322222111 1257889999999998877764       47887   664311   


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                        ..+.+.+...+++|+.+++++++++.+.+   +.++||++||..+.
T Consensus        91 --~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~  133 (325)
T PLN02989         91 --TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAV  133 (325)
T ss_pred             --CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhhe
Confidence              22335578899999999999999998764   23689999997654

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.84  E-value=4e-08  Score=74.60  Aligned_cols=105  Identities=13%  Similarity=0.147  Sum_probs=77.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHh-----cC---CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecC
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKN-----SG---CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL   70 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~-----~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~   70 (147)
                      ++.|+++|++|++++|+.+.++.+.+++..     .+   ..++.++.+|++|.+++.+       .++.+|++   +|.
T Consensus        97 Ar~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~-------aLggiDiVVn~AG~  169 (576)
T PLN03209         97 VRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP-------ALGNASVVICCIGA  169 (576)
T ss_pred             HHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH-------HhcCCCEEEEcccc
Confidence            567888999999999999888777665543     12   1247889999999888754       34678988   554


Q ss_pred             CCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           71 PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      ...       ...+|...+++|+.+..++++++...    +.++||++||..+.
T Consensus       170 ~~~-------~v~d~~~~~~VN~~Gt~nLl~Aa~~a----gVgRIV~VSSiga~  212 (576)
T PLN03209        170 SEK-------EVFDVTGPYRIDYLATKNLVDAATVA----KVNHFILVTSLGTN  212 (576)
T ss_pred             ccc-------cccchhhHHHHHHHHHHHHHHHHHHh----CCCEEEEEccchhc
Confidence            311       11246788899999999999987653    45789999998763

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.80  E-value=1.4e-07  Score=68.52  Aligned_cols=125  Identities=13%  Similarity=-0.002  Sum_probs=80.3

Q ss_pred             ccccccCCcEEEEeecChhh------------HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--
Q 040927            2 KRSNQVHYSMGEATTKDEKR------------GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--   67 (147)
                      ++.| +.|++++++++..+.            .+.+.+.++..+. .+..+.||++++++++++++.+.+.+|++|++  
T Consensus        60 A~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~-~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVn  137 (398)
T PRK13656         60 AAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGL-YAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVY  137 (398)
T ss_pred             HHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            4567 889998888753321            1234445555554 47789999999999999999999999999999  


Q ss_pred             -ecCCCcch--------------------h-------------hhcccHHHHHHhHHHhhh-hHHHHHHHH--HHhhccC
Q 040927           68 -GGLPDNWY--------------------K-------------MLTQTYELAEKCIQTNYY-GNKRMCEAL--IPLLQLS  110 (147)
Q Consensus        68 -ag~~~~~~--------------------~-------------~~~~~~~~~~~~~~~n~~-~~~~l~~~~--~~~l~~~  110 (147)
                       +|......                    +             +...+.++++.++.+.=. .-...++++  .+.|.  
T Consensus       138 SaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMggedw~~Wi~al~~a~lla--  215 (398)
T PRK13656        138 SLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGGEDWELWIDALDEAGVLA--  215 (398)
T ss_pred             CCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhccchHHHHHHHHHhccccc--
Confidence             34331111                    0             113445566666555443 223333333  34443  


Q ss_pred             CCCeEEEEcCCCCCCcCCCc
Q 040927          111 DSPRIVNASSSMGKLKNITN  130 (147)
Q Consensus       111 ~~~~iv~isS~~~~~~~~~~  130 (147)
                      .++++|.+|+..+....|..
T Consensus       216 ~g~~~va~TY~G~~~t~p~Y  235 (398)
T PRK13656        216 EGAKTVAYSYIGPELTHPIY  235 (398)
T ss_pred             CCcEEEEEecCCcceeeccc
Confidence            45899999998887776655

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=98.73  E-value=1.3e-07  Score=68.54  Aligned_cols=112  Identities=19%  Similarity=0.111  Sum_probs=75.8

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|.++|++|++++|+....+.+...+.. + .++.++.+|++|.+++.+++.       .+|++   |+........
T Consensus        26 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~~~~~~   96 (353)
T PLN02896         26 LVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-G-DRLRLFRADLQEEGSFDEAVK-------GCDGVFHVAASMEFDVSS   96 (353)
T ss_pred             HHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-C-CeEEEEECCCCCHHHHHHHHc-------CCCEEEECCccccCCccc
Confidence            3567888999999999987666555555432 2 258889999999988877653       46877   5544221111


Q ss_pred             hcccHHHH--HHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           78 LTQTYELA--EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        78 ~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      ...+.+.+  ...+++|+.++..+++++.+..   ..+++|++||....
T Consensus        97 ~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vy  142 (353)
T PLN02896         97 DHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTL  142 (353)
T ss_pred             cccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhc
Confidence            12233333  4677888999999999987653   23579999997544

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=98.71  E-value=1.2e-07  Score=68.54  Aligned_cols=107  Identities=18%  Similarity=0.135  Sum_probs=75.4

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|.++|++|++++|+..........+.. +. ++.++.+|++|.+++.++++..     .+|++   ||....    
T Consensus        20 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vih~A~~~~~----   88 (349)
T TIGR02622        20 LSLWLLELGAEVYGYSLDPPTSPNLFELLNL-AK-KIEDHFGDIRDAAKLRKAIAEF-----KPEIVFHLAAQPLV----   88 (349)
T ss_pred             HHHHHHHCCCEEEEEeCCCccchhHHHHHhh-cC-CceEEEccCCCHHHHHHHHhhc-----CCCEEEECCccccc----
Confidence            3567888999999999886554433333322 22 4777899999999998887753     57887   553211    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                       ..+.+++...+++|+.+++.+++++...   ...+++|++||..
T Consensus        89 -~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~  129 (349)
T TIGR02622        89 -RKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDK  129 (349)
T ss_pred             -ccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechh
Confidence             2344567788999999999999987532   1236899999964

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=98.69  E-value=2.4e-07  Score=66.52  Aligned_cols=106  Identities=19%  Similarity=0.200  Sum_probs=72.7

Q ss_pred             ccccccCC--cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHY--SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G--~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|  ++|++.+|+......+...+.  . .++.++.+|++|++++.++++       .+|++   ||....  +
T Consensus        21 ~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~-~~~~~v~~Dl~d~~~l~~~~~-------~iD~Vih~Ag~~~~--~   88 (324)
T TIGR03589        21 ISRLLENYNPKKIIIYSRDELKQWEMQQKFP--A-PCLRFFIGDVRDKERLTRALR-------GVDYVVHAAALKQV--P   88 (324)
T ss_pred             HHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--C-CcEEEEEccCCCHHHHHHHHh-------cCCEEEECcccCCC--c
Confidence            45677765  789998887655444333332  1 258889999999998877653       47888   664321  2


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                      ..+.+.   ...+++|+.++.++++++.+.    +.++||++||.....|
T Consensus        89 ~~~~~~---~~~~~~Nv~g~~~ll~aa~~~----~~~~iV~~SS~~~~~p  131 (324)
T TIGR03589        89 AAEYNP---FECIRTNINGAQNVIDAAIDN----GVKRVVALSTDKAANP  131 (324)
T ss_pred             hhhcCH---HHHHHHHHHHHHHHHHHHHHc----CCCEEEEEeCCCCCCC
Confidence            222232   468999999999999998863    3468999999765544

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02583 cinnamoyl-CoA reductase

Probab=98.69  E-value=1.6e-07  Score=66.63  Aligned_cols=105  Identities=13%  Similarity=-0.021  Sum_probs=70.9

Q ss_pred             ccccccCCcEEEEeecChh--hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEK--RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|.++|++|+++.|+..  ...+....+...+. ++.++.+|++|.+++...+       ...|.+   ++..   . 
T Consensus        23 v~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~~~~~l-------~~~d~v~~~~~~~---~-   90 (297)
T PLN02583         23 VKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEE-RLKVFDVDPLDYHSILDAL-------KGCSGLFCCFDPP---S-   90 (297)
T ss_pred             HHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCC-ceEEEEecCCCHHHHHHHH-------cCCCEEEEeCccC---C-
Confidence            5678899999999998632  22233333322222 5788899999998876544       235555   2221   1 


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                        ..+ .+++..+++|+.+++++++++.+.+   +.++||++||.++.
T Consensus        91 --~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~  132 (297)
T PLN02583         91 --DYP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAV  132 (297)
T ss_pred             --ccc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHhe
Confidence              111 2467899999999999999998764   23689999998764

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=98.53  E-value=5e-07  Score=65.11  Aligned_cols=110  Identities=14%  Similarity=0.040  Sum_probs=73.4

Q ss_pred             CccccccCCcEEEEeecChhh-----HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC
Q 040927            1 MKRSNQVHYSMGEATTKDEKR-----GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD   72 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~   72 (147)
                      +++.|.++|++|++++|+...     ++.+.......+ .++.++.+|++|.+++.++++..     .+|++   ||...
T Consensus        22 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~   95 (340)
T PLN02653         22 LTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNK-ARMKLHYGDLSDASSLRRWLDDI-----KPDEVYNLAAQSH   95 (340)
T ss_pred             HHHHHHHCCCEEEEEecccccccccchhhhcccccccc-CceEEEEecCCCHHHHHHHHHHc-----CCCEEEECCcccc
Confidence            356788899999999886532     222211111112 24788999999999998888764     47887   65432


Q ss_pred             cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC-CeEEEEcCC
Q 040927           73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS-PRIVNASSS  121 (147)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~  121 (147)
                      . .    ...+..+..+++|+.++..+++++.+...+.++ .++|++||.
T Consensus        96 ~-~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~  140 (340)
T PLN02653         96 V-A----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSS  140 (340)
T ss_pred             h-h----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccH
Confidence            2 1    122345677899999999999999988654311 268888874

>PLN02214 cinnamoyl-CoA reductase

Probab=98.47  E-value=1.4e-06  Score=63.03  Aligned_cols=101  Identities=14%  Similarity=0.105  Sum_probs=70.2

Q ss_pred             ccccccCCcEEEEeecChhhHHH-HHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLA-AVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~-~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++|++|.++.|+.+.... ....+.... .++.++.+|++|.+++.++++       .+|++   |+.. .    
T Consensus        27 ~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~-~----   93 (342)
T PLN02214         27 VKILLERGYTVKGTVRNPDDPKNTHLRELEGGK-ERLILCKADLQDYEALKAAID-------GCDGVFHTASPV-T----   93 (342)
T ss_pred             HHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCC-CcEEEEecCcCChHHHHHHHh-------cCCEEEEecCCC-C----
Confidence            56788899999999998654322 122332212 247888999999988877664       47887   5432 1    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                           +++...+++|+.++.++++++...    +.++||++||..+.
T Consensus        94 -----~~~~~~~~~nv~gt~~ll~aa~~~----~v~r~V~~SS~~av  131 (342)
T PLN02214         94 -----DDPEQMVEPAVNGAKFVINAAAEA----KVKRVVITSSIGAV  131 (342)
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeccceee
Confidence                 134678899999999999998653    33589999997544

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=98.46  E-value=1.1e-06  Score=63.68  Aligned_cols=109  Identities=15%  Similarity=0.099  Sum_probs=70.3

Q ss_pred             CccccccCCcEEE-EeecChhh--HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            1 MKRSNQVHYSMGE-ATTKDEKR--GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         1 ~~~~l~~~G~~v~-l~~r~~~~--~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      +++.|.++|++++ +.++....  .... ..+. .. .++.++.+|++|.+++.++++.     ..+|++   ||.... 
T Consensus        17 l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~Dl~d~~~~~~~~~~-----~~~D~Vih~A~~~~~-   87 (355)
T PRK10217         17 LVRYIINETSDAVVVVDKLTYAGNLMSL-APVA-QS-ERFAFEKVDICDRAELARVFTE-----HQPDCVMHLAAESHV-   87 (355)
T ss_pred             HHHHHHHcCCCEEEEEecCccccchhhh-hhcc-cC-CceEEEECCCcChHHHHHHHhh-----cCCCEEEECCcccCc-
Confidence            3567888898755 44443221  1111 1111 12 2477889999999988887765     258888   554321 


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhc---c--CCCCeEEEEcCCC
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQ---L--SDSPRIVNASSSM  122 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~---~--~~~~~iv~isS~~  122 (147)
                          ..+.++++..+++|+.++..+++++.+.|.   .  .+..++|++||.+
T Consensus        88 ----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~  136 (355)
T PRK10217         88 ----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE  136 (355)
T ss_pred             ----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh
Confidence                223456788999999999999999987542   1  1224799999854

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=98.44  E-value=1.4e-06  Score=62.99  Aligned_cols=111  Identities=16%  Similarity=0.114  Sum_probs=70.8

Q ss_pred             CccccccCCcEEEEeecChhh-----HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC
Q 040927            1 MKRSNQVHYSMGEATTKDEKR-----GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD   72 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~   72 (147)
                      +++.|.++|++|++++|+...     ++.+.+........++.++.+|++|.+++.++++..     .+|++   |+...
T Consensus        16 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~ViH~Aa~~~   90 (343)
T TIGR01472        16 LAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI-----KPTEIYNLAAQSH   90 (343)
T ss_pred             HHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC-----CCCEEEECCcccc
Confidence            356788899999999987532     222211111111124788999999999988887764     47887   55432


Q ss_pred             cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      ...     +.+.-...+++|+.++..+++++.+.-.+ +..++|++||..
T Consensus        91 ~~~-----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~  134 (343)
T TIGR01472        91 VKV-----SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSE  134 (343)
T ss_pred             cch-----hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHH
Confidence            211     11222466788999999999998874211 113689999854

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=98.42  E-value=1.8e-06  Score=61.74  Aligned_cols=106  Identities=12%  Similarity=0.064  Sum_probs=70.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++|++|+++.|+....+.........+ ..++.++.+|++|++++.++++       .+|++   |+.... .  
T Consensus        22 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vih~A~~~~~-~--   91 (322)
T PLN02986         22 VKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-------GCDAVFHTASPVFF-T--   91 (322)
T ss_pred             HHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-------CCCEEEEeCCCcCC-C--
Confidence            46788899999999998765443332222111 1257889999999988877764       37887   554311 1  


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                       ..  +.....+++|+.++..+++++....   +.++||++||...
T Consensus        92 -~~--~~~~~~~~~nv~gt~~ll~~~~~~~---~v~rvV~~SS~~~  131 (322)
T PLN02986         92 -VK--DPQTELIDPALKGTINVLNTCKETP---SVKRVILTSSTAA  131 (322)
T ss_pred             -CC--CchhhhhHHHHHHHHHHHHHHHhcC---CccEEEEecchhh
Confidence             11  1235678999999999999876431   2358999999764

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=98.41  E-value=2.2e-06  Score=61.59  Aligned_cols=107  Identities=13%  Similarity=0.087  Sum_probs=69.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|...........+...+..++.++.+|++|.+++.+++..     ..+|++   ||.... ..  
T Consensus        17 ~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vvh~a~~~~~-~~--   88 (338)
T PRK10675         17 CVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDTVIHFAGLKAV-GE--   88 (338)
T ss_pred             HHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCEEEECCccccc-cc--
Confidence            5678889999998876433222222333332222467889999999888777653     368888   554321 11  


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                        ..+.....+++|+.++..+++++..    .+.+++|++||..
T Consensus        89 --~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~  126 (338)
T PRK10675         89 --SVQKPLEYYDNNVNGTLRLISAMRA----ANVKNLIFSSSAT  126 (338)
T ss_pred             --hhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHH
Confidence              1123356788999999999887543    3446799999864

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.40  E-value=9.2e-07  Score=62.13  Aligned_cols=114  Identities=18%  Similarity=0.102  Sum_probs=76.2

Q ss_pred             CccccccCCc-EEEEeecChhhHHHHHHHHHhcCC-CceE----EEEecCCCHHHHHHHHHHHHhhcCCccEE--ecCCC
Q 040927            1 MKRSNQVHYS-MGEATTKDEKRGLAAVEKLKNSGC-DNVI----FHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLPD   72 (147)
Q Consensus         1 ~~~~l~~~G~-~v~l~~r~~~~~~~~~~~l~~~~~-~~~~----~~~~D~~~~~~~~~~~~~~~~~~g~id~l--ag~~~   72 (147)
                      |++++++.+. +|+++++++..+-++..++..... .++.    .+.+|++|.+.+..++++     .++|++  |+-..
T Consensus        14 L~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~-----~~pdiVfHaAA~K   88 (293)
T PF02719_consen   14 LVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE-----YKPDIVFHAAALK   88 (293)
T ss_dssp             HHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-------T-SEEEE-----
T ss_pred             HHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----cCCCEEEEChhcC
Confidence            4677777774 699999999999999888864332 2343    346799999888877754     378999  44442


Q ss_pred             cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                      . .++.+..+   .+.+.+|+.|+.++++++..+    +-.++|++|+.-+..|.
T Consensus        89 h-Vpl~E~~p---~eav~tNv~GT~nv~~aa~~~----~v~~~v~ISTDKAv~Pt  135 (293)
T PF02719_consen   89 H-VPLMEDNP---FEAVKTNVLGTQNVAEAAIEH----GVERFVFISTDKAVNPT  135 (293)
T ss_dssp             --HHHHCCCH---HHHHHHHCHHHHHHHHHHHHT----T-SEEEEEEECGCSS--
T ss_pred             C-CChHHhCH---HHHHHHHHHHHHHHHHHHHHc----CCCEEEEccccccCCCC
Confidence            3 45555544   567999999999999999876    33579999998877654

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02572 UDP-sulfoquinovose synthase

Probab=98.37  E-value=4.1e-06  Score=62.65  Aligned_cols=112  Identities=10%  Similarity=-0.050  Sum_probs=73.2

Q ss_pred             CccccccCCcEEEEeecChh---h----H---------HHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCc
Q 040927            1 MKRSNQVHYSMGEATTKDEK---R----G---------LAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKL   64 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~---~----~---------~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   64 (147)
                      |++.|+++|++|+++++...   .    .         .+-.+.+......++.++.+|++|.+++.++++..     ++
T Consensus        63 Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~~l~~~-----~~  137 (442)
T PLN02572         63 TALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAFKSF-----EP  137 (442)
T ss_pred             HHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHHHHHhC-----CC
Confidence            46778889999999864210   0    0         00111111111124889999999999988887763     58


Q ss_pred             cEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           65 DIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        65 d~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      |++   |+.. . .+....+.++++..+++|+.|++++++++...-.   +.++|++||..
T Consensus       138 D~ViHlAa~~-~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv---~~~~V~~SS~~  193 (442)
T PLN02572        138 DAVVHFGEQR-S-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP---DCHLVKLGTMG  193 (442)
T ss_pred             CEEEECCCcc-c-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEecce
Confidence            888   4332 1 2333445566788899999999999999866421   14699999875

>PLN02650 dihydroflavonol-4-reductase

Probab=98.36  E-value=3.9e-06  Score=60.79  Aligned_cols=107  Identities=16%  Similarity=0.053  Sum_probs=71.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|.++|++|++++|+.+........+...+. .++.++.+|++|.+.+.++++       .+|.+   |+.... . 
T Consensus        21 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------~~d~ViH~A~~~~~-~-   91 (351)
T PLN02650         21 LVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------GCTGVFHVATPMDF-E-   91 (351)
T ss_pred             HHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------CCCEEEEeCCCCCC-C-
Confidence            3567888999999999987655544332221111 147888999999988877654       36777   543211 1 


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                        ..  +.++..+++|+.++.++++++.+..   ..++||++||...
T Consensus        92 --~~--~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~  131 (351)
T PLN02650         92 --SK--DPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGT  131 (351)
T ss_pred             --CC--CchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhh
Confidence              11  2235678999999999999987753   1257999999743

>PLN00198 anthocyanidin reductase; Provisional

Probab=98.33  E-value=4.8e-06  Score=60.01  Aligned_cols=106  Identities=14%  Similarity=0.114  Sum_probs=69.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHH--HHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAV--EKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~--~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~   75 (147)
                      +++.|.++|++|+++.|+........  ..+... + ++.++.+|++|.+++.+++.       .+|++   |+.. .  
T Consensus        25 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~-~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~-~--   92 (338)
T PLN00198         25 LIKLLLQKGYAVNTTVRDPENQKKIAHLRALQEL-G-DLKIFGADLTDEESFEAPIA-------GCDLVFHVATPV-N--   92 (338)
T ss_pred             HHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCC-C-ceEEEEcCCCChHHHHHHHh-------cCCEEEEeCCCC-c--
Confidence            35678889999998888764433221  112111 1 47888999999988776653       46887   5532 1  


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                       ..  ..+.+...+++|+.++..+++++.+..   +.+++|++||.+..
T Consensus        93 -~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~~~~~v~~SS~~~~  135 (338)
T PLN00198         93 -FA--SEDPENDMIKPAIQGVHNVLKACAKAK---SVKRVILTSSAAAV  135 (338)
T ss_pred             -cC--CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeecceee
Confidence             11  112235678999999999999986642   23689999997643

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=98.30  E-value=4.2e-06  Score=59.56  Aligned_cols=110  Identities=18%  Similarity=0.120  Sum_probs=78.0

Q ss_pred             ccccccCCcEEEEeecChhhHHH--HHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLA--AVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~--~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--ag~~~~~~~~   77 (147)
                      ++.|.++||+|..+.|+.+.-+.  .+.+++.... +...+..|+.|+++++..++.       .|++  .+.+..+.. 
T Consensus        23 vk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~-~l~l~~aDL~d~~sf~~ai~g-------cdgVfH~Asp~~~~~-   93 (327)
T KOG1502|consen   23 VKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKE-RLKLFKADLLDEGSFDKAIDG-------CDGVFHTASPVDFDL-   93 (327)
T ss_pred             HHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcc-cceEEeccccccchHHHHHhC-------CCEEEEeCccCCCCC-
Confidence            56789999999999999876333  3455554443 689999999999999887643       6777  333312221 


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                        .+  --.+.++..+.|+.++++++...=   .-.+||++||.++....
T Consensus        94 --~~--~e~~li~pav~Gt~nVL~ac~~~~---sVkrvV~TSS~aAv~~~  136 (327)
T KOG1502|consen   94 --ED--PEKELIDPAVKGTKNVLEACKKTK---SVKRVVYTSSTAAVRYN  136 (327)
T ss_pred             --CC--cHHhhhhHHHHHHHHHHHHHhccC---CcceEEEeccHHHhccC
Confidence              11  113688999999999999986542   23679999999887654

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.30  E-value=3.1e-06  Score=55.71  Aligned_cols=64  Identities=9%  Similarity=-0.056  Sum_probs=53.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      ++.|++.|++|++++|+.+..+++...+.. +. ++..+.+|++|++++.++++.+.+.++++|++
T Consensus        16 a~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~-~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309         16 SLWLCEKGFHVSVIARREVKLENVKRESTT-PE-SITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             HHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            567889999999999998877776655543 22 58889999999999999999999888999887

>PLN02240 UDP-glucose 4-epimerase

Probab=98.28  E-value=6.4e-06  Score=59.57  Aligned_cols=106  Identities=17%  Similarity=0.226  Sum_probs=69.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHH----hcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLK----NSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|.++|++|++++|......+....+.    ..+ .++.++.+|++|++++.++++.     ..+|++   +|.... 
T Consensus        22 ~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~l~~~~~~-----~~~d~vih~a~~~~~-   94 (352)
T PLN02240         22 VLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLG-DNLVFHKVDLRDKEALEKVFAS-----TRFDAVIHFAGLKAV-   94 (352)
T ss_pred             HHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccC-ccceEEecCcCCHHHHHHHHHh-----CCCCEEEEccccCCc-
Confidence            56778889999998865322211111221    112 2578899999999998887765     267887   554321 


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      .    .+.+++...+++|+.++..+++++..    .+.+++|++||..
T Consensus        95 ~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~  134 (352)
T PLN02240         95 G----ESVAKPLLYYDNNLVGTINLLEVMAK----HGCKKLVFSSSAT  134 (352)
T ss_pred             c----ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHH
Confidence            1    12345677899999999999887543    3346799999854

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.24  E-value=9.7e-06  Score=61.29  Aligned_cols=116  Identities=19%  Similarity=0.092  Sum_probs=87.2

Q ss_pred             ccccccCCcE-EEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--ecCCCcchhh
Q 040927            2 KRSNQVHYSM-GEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~-v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--ag~~~~~~~~   77 (147)
                      |+++++.+.+ +++.+|++.++-.+..++....+ .+..++-+|+.|.+.++.+++..     ++|++  |+-... -|+
T Consensus       267 ~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-----kvd~VfHAAA~KH-VPl  340 (588)
T COG1086         267 CRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-----KVDIVFHAAALKH-VPL  340 (588)
T ss_pred             HHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-----CCceEEEhhhhcc-Ccc
Confidence            5566666555 88889999999999999987532 46888999999999998887653     78999  443322 444


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN  130 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  130 (147)
                      .+..+   .+.+.+|+.|+.++.+++...-    -.++|.+|+.-+..|....
T Consensus       341 ~E~nP---~Eai~tNV~GT~nv~~aa~~~~----V~~~V~iSTDKAV~PtNvm  386 (588)
T COG1086         341 VEYNP---EEAIKTNVLGTENVAEAAIKNG----VKKFVLISTDKAVNPTNVM  386 (588)
T ss_pred             hhcCH---HHHHHHhhHhHHHHHHHHHHhC----CCEEEEEecCcccCCchHh
Confidence            45444   6788999999999999997753    3569999998887764433

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.19  E-value=1.9e-06  Score=58.92  Aligned_cols=84  Identities=11%  Similarity=0.040  Sum_probs=61.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|+++++...        +...     ....+|+++.+++.++++.+.+.++++|++   ||.. ...++
T Consensus        31 IA~~la~~Ga~Vvlv~~~~~--------l~~~-----~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~-d~~~~   96 (227)
T TIGR02114        31 ITETFLSAGHEVTLVTTKRA--------LKPE-----PHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVS-DYTPV   96 (227)
T ss_pred             HHHHHHHCCCEEEEEcChhh--------cccc-----cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEec-cccch
Confidence            36778899999999876311        1110     124589999999999999999999999999   7765 44678


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHH
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCE  101 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~  101 (147)
                      .+.+.++|++++.+   +.+++.+
T Consensus        97 ~~~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        97 YMTDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             hhCCHHHHhhhcch---hhhhccc
Confidence            88999999987544   4444443

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=98.14  E-value=1.9e-05  Score=56.35  Aligned_cols=106  Identities=14%  Similarity=0.065  Sum_probs=68.8

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|.++|++|+++.|+..............+ ..++.++.+|++|++++..+++       .+|++   |+.... . 
T Consensus        20 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~~-~-   90 (322)
T PLN02662         20 LVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------GCEGVFHTASPFYH-D-   90 (322)
T ss_pred             HHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------CCCEEEEeCCcccC-C-
Confidence            356788899999999987654332221111111 1257889999999988776654       46877   553311 1 


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                        ...  .....+++|+.++.++++++....   +..++|++||.+
T Consensus        91 --~~~--~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~  129 (322)
T PLN02662         91 --VTD--PQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMA  129 (322)
T ss_pred             --CCC--hHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHH
Confidence              011  124678999999999999976542   235799999965

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=98.13  E-value=1.5e-05  Score=56.75  Aligned_cols=105  Identities=17%  Similarity=0.092  Sum_probs=68.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|+++++......+....+...+  ++..+.+|+++++++.++++.     +.+|++   +|.... .+  
T Consensus        16 ~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv~~ag~~~~-~~--   85 (328)
T TIGR01179        16 VRQLLESGHEVVVLDNLSNGSPEALKRGERIT--RVTFVEGDLRDRELLDRLFEE-----HKIDAVIHFAGLIAV-GE--   85 (328)
T ss_pred             HHHHHhCCCeEEEEeCCCccchhhhhhhcccc--ceEEEECCCCCHHHHHHHHHh-----CCCcEEEECccccCc-ch--
Confidence            56788899999888764332222222222222  477888999999998887763     478888   654322 11  


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                        ..++..+.+..|+.++..+++.+..    .+.+++|++||..
T Consensus        86 --~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~ss~~  123 (328)
T TIGR01179        86 --SVQDPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSSSAA  123 (328)
T ss_pred             --hhcCchhhhhhhHHHHHHHHHHHHh----cCCCEEEEecchh
Confidence              2234456788999999999887643    2346899998854

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=98.10  E-value=1.9e-05  Score=57.18  Aligned_cols=108  Identities=15%  Similarity=0.059  Sum_probs=68.4

Q ss_pred             ccccccCCcE-EEEeecCh--hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927            2 KRSNQVHYSM-GEATTKDE--KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         2 ~~~l~~~G~~-v~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~   75 (147)
                      ++.|.++|+. |+.+++..  ...+... .+.. + .++.++.+|++|.+++.++++.     ..+|++   ||......
T Consensus        17 ~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~~-~-~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~~~   88 (352)
T PRK10084         17 VRHIINNTQDSVVNVDKLTYAGNLESLA-DVSD-S-ERYVFEHADICDRAELDRIFAQ-----HQPDAVMHLAAESHVDR   88 (352)
T ss_pred             HHHHHHhCCCeEEEecCCCccchHHHHH-hccc-C-CceEEEEecCCCHHHHHHHHHh-----cCCCEEEECCcccCCcc
Confidence            5667778876 44455432  1222211 1211 2 2477889999999999888765     268888   55431111


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-----CCCeEEEEcCCC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-----DSPRIVNASSSM  122 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~iv~isS~~  122 (147)
                           +....+..+++|+.++..+++++.+.|...     +..++|++||..
T Consensus        89 -----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~  135 (352)
T PRK10084         89 -----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE  135 (352)
T ss_pred             -----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh
Confidence                 112346689999999999999998876421     124799999864

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.08  E-value=2.1e-05  Score=55.23  Aligned_cols=107  Identities=17%  Similarity=0.068  Sum_probs=71.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      +++|.+.|++|++++.-...-.+.+...      ...++..|+.|.+.+++++++     ..+|.+   ||...- +   
T Consensus        17 v~~Ll~~G~~vvV~DNL~~g~~~~v~~~------~~~f~~gDi~D~~~L~~vf~~-----~~idaViHFAa~~~V-g---   81 (329)
T COG1087          17 VRQLLKTGHEVVVLDNLSNGHKIALLKL------QFKFYEGDLLDRALLTAVFEE-----NKIDAVVHFAASISV-G---   81 (329)
T ss_pred             HHHHHHCCCeEEEEecCCCCCHHHhhhc------cCceEEeccccHHHHHHHHHh-----cCCCEEEECcccccc-c---
Confidence            5678899999999986443222222221      157899999999988888876     378877   665422 2   


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                       .+.++=.+.++.|+.|+..|++++...    +-..+|| ||.++.-|.|.
T Consensus        82 -ESv~~Pl~Yy~NNv~gTl~Ll~am~~~----gv~~~vF-SStAavYG~p~  126 (329)
T COG1087          82 -ESVQNPLKYYDNNVVGTLNLIEAMLQT----GVKKFIF-SSTAAVYGEPT  126 (329)
T ss_pred             -hhhhCHHHHHhhchHhHHHHHHHHHHh----CCCEEEE-ecchhhcCCCC
Confidence             233444678899999999999986554    3344664 55565555443

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=98.07  E-value=3e-05  Score=54.98  Aligned_cols=106  Identities=17%  Similarity=0.074  Sum_probs=68.0

Q ss_pred             ccccccCC--cEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927            2 KRSNQVHY--SMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         2 ~~~l~~~G--~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~   75 (147)
                      ++.|.+.|  ++|++.+|... .-.+..+.+...  .++.++.+|++|++++.++++..     .+|++   ++....  
T Consensus        16 ~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~--   86 (317)
T TIGR01181        16 VRYILNEHPDAEVIVLDKLTYAGNLENLADLEDN--PRYRFVKGDIGDRELVSRLFTEH-----QPDAVVHFAAESHV--   86 (317)
T ss_pred             HHHHHHhCCCCEEEEecCCCcchhhhhhhhhccC--CCcEEEEcCCcCHHHHHHHHhhc-----CCCEEEEcccccCc--
Confidence            45566666  78888776321 111111222211  24778899999999998877542     58888   443311  


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                         ..+.+.++..+++|+.++..+++++...+.   +.++|++||..
T Consensus        87 ---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~  127 (317)
T TIGR01181        87 ---DRSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDE  127 (317)
T ss_pred             ---hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccc
Confidence               123345667899999999999998876543   24699999854

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=97.99  E-value=1.6e-05  Score=56.71  Aligned_cols=98  Identities=19%  Similarity=0.070  Sum_probs=67.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+.+....    +.  . ..+.++.+|++|.+++.++++       .+|++   ++....     
T Consensus        17 ~~~L~~~g~~V~~~~r~~~~~~~----~~--~-~~~~~~~~D~~~~~~l~~~~~-------~~d~vi~~a~~~~~-----   77 (328)
T TIGR03466        17 VRLLLEQGEEVRVLVRPTSDRRN----LE--G-LDVEIVEGDLRDPASLRKAVA-------GCRALFHVAADYRL-----   77 (328)
T ss_pred             HHHHHHCCCEEEEEEecCccccc----cc--c-CCceEEEeeCCCHHHHHHHHh-------CCCEEEEeceeccc-----
Confidence            56788899999999998654321    11  1 147789999999988776653       46777   443211     


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                        ..++.+..+++|+.++..+++++...    +.+++|++||....
T Consensus        78 --~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~  117 (328)
T TIGR03466        78 --WAPDPEEMYAANVEGTRNLLRAALEA----GVERVVYTSSVATL  117 (328)
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHHh----CCCeEEEEechhhc
Confidence              11234667889999999999987643    34689999997643

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=97.93  E-value=7.1e-05  Score=55.23  Aligned_cols=105  Identities=14%  Similarity=0.010  Sum_probs=67.6

Q ss_pred             ccccccCCcEEEEeecChhhHHH--HHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLA--AVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~--~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|.++|++|+++.|+....+.  ..+++..... ++.++.+|++|++++.++++...   +.+|++   +|.... . 
T Consensus        77 ~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~v~~v~~Dl~d~~~l~~~~~~~~---~~~D~Vi~~aa~~~~-~-  150 (390)
T PLN02657         77 VRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELP-GAEVVFGDVTDADSLRKVLFSEG---DPVDVVVSCLASRTG-G-  150 (390)
T ss_pred             HHHHHHCCCEEEEEEechhhccccchhhHHhhhcC-CceEEEeeCCCHHHHHHHHHHhC---CCCcEEEECCccCCC-C-
Confidence            56788899999999998754321  1112222222 47899999999999988876531   268888   443211 1 


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                          .    ...+++|+.+...+++++.    +.+.+++|++||....
T Consensus       151 ----~----~~~~~vn~~~~~~ll~aa~----~~gv~r~V~iSS~~v~  186 (390)
T PLN02657        151 ----V----KDSWKIDYQATKNSLDAGR----EVGAKHFVLLSAICVQ  186 (390)
T ss_pred             ----C----ccchhhHHHHHHHHHHHHH----HcCCCEEEEEeecccc
Confidence                1    1234667778777777764    3344689999997654

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=97.92  E-value=4.4e-05  Score=53.86  Aligned_cols=104  Identities=19%  Similarity=0.188  Sum_probs=70.5

Q ss_pred             ccccccCC--cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHY--SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G--~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++|.++|  ++|.+.++......  ...+...+  ...++.+|++|.+++.++++       ..|++   |+...... 
T Consensus        14 v~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~~--~~~~~~~Di~d~~~l~~a~~-------g~d~V~H~Aa~~~~~~-   81 (280)
T PF01073_consen   14 VRQLLERGYIYEVRVLDRSPPPKF--LKDLQKSG--VKEYIQGDITDPESLEEALE-------GVDVVFHTAAPVPPWG-   81 (280)
T ss_pred             HHHHHHCCCceEEEEccccccccc--chhhhccc--ceeEEEeccccHHHHHHHhc-------CCceEEEeCccccccC-
Confidence            56788899  77888887654311  11222222  23489999999999988774       35777   44432211 


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                           ....+..+++|+.|+-++++++...    +-.++|++||......
T Consensus        82 -----~~~~~~~~~vNV~GT~nvl~aa~~~----~VkrlVytSS~~vv~~  122 (280)
T PF01073_consen   82 -----DYPPEEYYKVNVDGTRNVLEAARKA----GVKRLVYTSSISVVFD  122 (280)
T ss_pred             -----cccHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEcCcceeEe
Confidence                 2334778999999999999998753    4467999999886554

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=97.89  E-value=0.0001  Score=53.47  Aligned_cols=106  Identities=11%  Similarity=-0.006  Sum_probs=65.9

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHH----hcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLK----NSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      |++.|.++|++|++++|...........+.    .....++.++.+|+.|.+++..+++       .+|++   |+....
T Consensus        31 lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-------~~d~ViHlAa~~~~  103 (348)
T PRK15181         31 LLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-------NVDYVLHQAALGSV  103 (348)
T ss_pred             HHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-------CCCEEEECccccCc
Confidence            356778889999988875432222122221    1111247788999999877766653       36877   544322


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      ..     +.++-...+++|+.|+.++++.+...    +-.++|++||..
T Consensus       104 ~~-----~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~v~~SS~~  143 (348)
T PRK15181        104 PR-----SLKDPIATNSANIDGFLNMLTAARDA----HVSSFTYAASSS  143 (348)
T ss_pred             hh-----hhhCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEeechH
Confidence            11     11223456899999999999987542    335799999864

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=97.88  E-value=0.00014  Score=49.39  Aligned_cols=102  Identities=21%  Similarity=0.252  Sum_probs=72.0

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++++|.++|+.|+...|+...........      ++.++.+|+.|.+.++++++..     .+|.+   |+...  .  
T Consensus        14 l~~~l~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~--~--   78 (236)
T PF01370_consen   14 LVRQLLKKGHEVIVLSRSSNSESFEEKKL------NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHLAAFSS--N--   78 (236)
T ss_dssp             HHHHHHHTTTEEEEEESCSTGGHHHHHHT------TEEEEESETTSHHHHHHHHHHH-----TESEEEEEBSSSS--H--
T ss_pred             HHHHHHHcCCccccccccccccccccccc------eEEEEEeecccccccccccccc-----CceEEEEeecccc--c--
Confidence            35678899999888887765433222221      5899999999999999988775     67888   54432  1  


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                       ..+.+.....++.|+.++..+++.+...    +..++|++||..
T Consensus        79 -~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~sS~~  118 (236)
T PF01370_consen   79 -PESFEDPEEIIEANVQGTRNLLEAAREA----GVKRFIFLSSAS  118 (236)
T ss_dssp             -HHHHHSHHHHHHHHHHHHHHHHHHHHHH----TTSEEEEEEEGG
T ss_pred             -cccccccccccccccccccccccccccc----cccccccccccc
Confidence             1122556777888999988888887654    335799999943

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=97.78  E-value=0.00015  Score=51.59  Aligned_cols=104  Identities=17%  Similarity=0.083  Sum_probs=68.3

Q ss_pred             cccccCCcEEEEeecC----hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927            3 RSNQVHYSMGEATTKD----EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         3 ~~l~~~G~~v~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~   75 (147)
                      -+|.++|+.|++++.-    .+.+.+...... .+. ++.++..|++|.+.++++|+..     .+|.+   |+.... .
T Consensus        20 l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~-~~~-~v~f~~~Dl~D~~~L~kvF~~~-----~fd~V~Hfa~~~~v-g   91 (343)
T KOG1371|consen   20 LALLKRGYGVVIVDNLNNSYLESLKRVRQLLG-EGK-SVFFVEGDLNDAEALEKLFSEV-----KFDAVMHFAALAAV-G   91 (343)
T ss_pred             HHHHhCCCcEEEEecccccchhHHHHHHHhcC-CCC-ceEEEEeccCCHHHHHHHHhhc-----CCceEEeehhhhcc-c
Confidence            4678899999999753    233333322222 233 6999999999999999988775     46666   443211 1


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                          .+.+.-....+.|+.|++.++..+..+    +-..+|+.||..
T Consensus        92 ----eS~~~p~~Y~~nNi~gtlnlLe~~~~~----~~~~~V~sssat  130 (343)
T KOG1371|consen   92 ----ESMENPLSYYHNNIAGTLNLLEVMKAH----NVKALVFSSSAT  130 (343)
T ss_pred             ----hhhhCchhheehhhhhHHHHHHHHHHc----CCceEEEeccee
Confidence                122333678899999999998886544    345678777643

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=97.77  E-value=9.6e-05  Score=51.14  Aligned_cols=97  Identities=14%  Similarity=0.153  Sum_probs=60.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCH-HHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP-ASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.+.|++|+++.|+.+..++..   . .+. ++.++.+|++|. +++   .+.+.   ..+|++   +|......+.
T Consensus        34 ~~~L~~~g~~V~~~~R~~~~~~~~~---~-~~~-~~~~~~~Dl~d~~~~l---~~~~~---~~~d~vi~~~g~~~~~~~~  102 (251)
T PLN00141         34 VEQLLAKGFAVKAGVRDVDKAKTSL---P-QDP-SLQIVRADVTEGSDKL---VEAIG---DDSDAVICATGFRRSFDPF  102 (251)
T ss_pred             HHHHHhCCCEEEEEecCHHHHHHhc---c-cCC-ceEEEEeeCCCCHHHH---HHHhh---cCCCEEEECCCCCcCCCCC
Confidence            4567788999999999876544322   1 122 488899999983 322   22221   268888   4433111111


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                               ..+++|+.++..+++++.    +.+.++||++||..
T Consensus       103 ---------~~~~~n~~~~~~ll~a~~----~~~~~~iV~iSS~~  134 (251)
T PLN00141        103 ---------APWKVDNFGTVNLVEACR----KAGVTRFILVSSIL  134 (251)
T ss_pred             ---------CceeeehHHHHHHHHHHH----HcCCCEEEEEcccc
Confidence                     124678888888888864    33457899999975

>PLN02427 UDP-apiose/xylose synthase

Probab=97.65  E-value=0.00029  Score=51.81  Aligned_cols=104  Identities=10%  Similarity=0.042  Sum_probs=63.3

Q ss_pred             ccccccC-CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVH-YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~-G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++ |++|++++|+.+....+..........++.++.+|++|.+++.++++       .+|++   |+.... ...
T Consensus        31 v~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~-------~~d~ViHlAa~~~~-~~~  102 (386)
T PLN02427         31 CEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK-------MADLTINLAAICTP-ADY  102 (386)
T ss_pred             HHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh-------cCCEEEEcccccCh-hhh
Confidence            4567776 68999998876544332211000011258899999999888776653       36777   554322 111


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      . .+.   ...+..|+.+...+++++...    + .++|++||..
T Consensus       103 ~-~~~---~~~~~~n~~gt~~ll~aa~~~----~-~r~v~~SS~~  138 (386)
T PLN02427        103 N-TRP---LDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCE  138 (386)
T ss_pred             h-hCh---HHHHHHHHHHHHHHHHHHHhc----C-CEEEEEeeee
Confidence            1 111   234567999998888877532    2 5799999964

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.50  E-value=0.0013  Score=43.05  Aligned_cols=86  Identities=17%  Similarity=0.128  Sum_probs=59.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      +++|.++|++|.++.|+.++.++        . .++.++.+|+.|++++.+.+.       ..|.+   +|....     
T Consensus        15 ~~~L~~~~~~V~~~~R~~~~~~~--------~-~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~~~~~~~-----   73 (183)
T PF13460_consen   15 AKQLLRRGHEVTALVRSPSKAED--------S-PGVEIIQGDLFDPDSVKAALK-------GADAVIHAAGPPPK-----   73 (183)
T ss_dssp             HHHHHHTTSEEEEEESSGGGHHH--------C-TTEEEEESCTTCHHHHHHHHT-------TSSEEEECCHSTTT-----
T ss_pred             HHHHHHCCCEEEEEecCchhccc--------c-cccccceeeehhhhhhhhhhh-------hcchhhhhhhhhcc-----
Confidence            46788899999999999887665        2 269999999999977766553       56777   433311     


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL  125 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  125 (147)
                          +             ...++.++..+++.+..++|++||.....
T Consensus        74 ----~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~  103 (183)
T PF13460_consen   74 ----D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYR  103 (183)
T ss_dssp             ----H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTT
T ss_pred             ----c-------------ccccccccccccccccccceeeeccccCC
Confidence                0             23345555556556667899999866544

...

>PLN02686 cinnamoyl-CoA reductase

Probab=97.42  E-value=0.0011  Score=48.65  Aligned_cols=106  Identities=11%  Similarity=0.059  Sum_probs=64.8

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcC-----CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-----CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD   72 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~   72 (147)
                      +++.|+++|++|+++.|+.+..+.+ .++...+     ..++.++.+|++|.+++.++++.+       |.+   ++...
T Consensus        69 lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~-------d~V~hlA~~~~  140 (367)
T PLN02686         69 IVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC-------AGVFHTSAFVD  140 (367)
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc-------cEEEecCeeec
Confidence            3567889999999988887655443 2332211     114778899999999988877643       333   33221


Q ss_pred             cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      ... ...    ......++|+.+...+++++...   .+-.++|++||..
T Consensus       141 ~~~-~~~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~  182 (367)
T PLN02686        141 PAG-LSG----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLL  182 (367)
T ss_pred             ccc-ccc----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHH
Confidence            111 000    01234567888888888886542   1234799999963

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.27  E-value=0.0012  Score=47.38  Aligned_cols=93  Identities=12%  Similarity=0.018  Sum_probs=60.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|.++.|+......    +...   .+.++.+|++|++++.++++       .+|.+   ++.. . .   
T Consensus        17 v~~Ll~~g~~V~~l~R~~~~~~~----l~~~---~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~~~~~~-~-~---   77 (317)
T CHL00194         17 VRQALDEGYQVRCLVRNLRKASF----LKEW---GAELVYGDLSLPETLPPSFK-------GVTAIIDASTSR-P-S---   77 (317)
T ss_pred             HHHHHHCCCeEEEEEcChHHhhh----Hhhc---CCEEEECCCCCHHHHHHHHC-------CCCEEEECCCCC-C-C---
Confidence            56788899999999998654322    2211   47889999999988766553       46877   2221 1 1   


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                           +.....++|+.+..++.+++..    .+-.++|++||..
T Consensus        78 -----~~~~~~~~~~~~~~~l~~aa~~----~gvkr~I~~Ss~~  112 (317)
T CHL00194         78 -----DLYNAKQIDWDGKLALIEAAKA----AKIKRFIFFSILN  112 (317)
T ss_pred             -----CccchhhhhHHHHHHHHHHHHH----cCCCEEEEecccc
Confidence                 1123456788888777777653    3335799999854

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=97.27  E-value=0.0011  Score=46.60  Aligned_cols=95  Identities=22%  Similarity=0.268  Sum_probs=61.8

Q ss_pred             EEEeecChhhHHHHHHHHHhcCCCceEEE---EecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHH
Q 040927           12 GEATTKDEKRGLAAVEKLKNSGCDNVIFH---LLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELA   85 (147)
Q Consensus        12 v~l~~r~~~~~~~~~~~l~~~~~~~~~~~---~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~   85 (147)
                      |++++.+..-...+.+.+.+.|. ++..+   .+|+.+++++.++++..     .+|++   +|.... ..    .....
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~-~v~~~~r~~~d~~~~~~~~~~~~~~-----~~d~vi~~a~~~~~-~~----~~~~~   70 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGR-VVVALTSSQLDLTDPEALERLLRAI-----RPDAVVNTAAYTDV-DG----AESDP   70 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCC-EEEEeCCcccCCCCHHHHHHHHHhC-----CCCEEEECCccccc-cc----cccCH
Confidence            56666666666677777766553 33322   36999998888776552     57888   554321 11    11234


Q ss_pred             HHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           86 EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        86 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      +..+++|+.++..+.+++...    + .++|++||..
T Consensus        71 ~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~Ss~~  102 (287)
T TIGR01214        71 EKAFAVNALAPQNLARAAARH----G-ARLVHISTDY  102 (287)
T ss_pred             HHHHHHHHHHHHHHHHHHHHc----C-CeEEEEeeee
Confidence            567889999999999987542    2 4799999864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=97.18  E-value=0.0041  Score=44.05  Aligned_cols=98  Identities=24%  Similarity=0.221  Sum_probs=64.8

Q ss_pred             EEEEeecChhhHHHHHHHHHhcCCCceEEE---EecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHH
Q 040927           11 MGEATTKDEKRGLAAVEKLKNSGCDNVIFH---LLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYEL   84 (147)
Q Consensus        11 ~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~---~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~   84 (147)
                      +|.+++.+..-+..+...+...+- .+...   .+|++|.+++.++++..     .+|++   ||.... ..    -..+
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~-~v~~~~r~~~dl~d~~~~~~~~~~~-----~pd~Vin~aa~~~~-~~----ce~~   70 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGY-EVIATSRSDLDLTDPEAVAKLLEAF-----KPDVVINCAAYTNV-DA----CEKN   70 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSE-EEEEESTTCS-TTSHHHHHHHHHHH-------SEEEE------H-HH----HHHS
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCC-EEEEeCchhcCCCCHHHHHHHHHHh-----CCCeEeccceeecH-Hh----hhhC
Confidence            688888888888888888876542 24444   67999999998888765     57877   555422 21    1223


Q ss_pred             HHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           85 AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        85 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      -+..+.+|+.++..+.+.+...     +.++|++||..-.
T Consensus        71 p~~a~~iN~~~~~~la~~~~~~-----~~~li~~STd~VF  105 (286)
T PF04321_consen   71 PEEAYAINVDATKNLAEACKER-----GARLIHISTDYVF  105 (286)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHC-----T-EEEEEEEGGGS
T ss_pred             hhhhHHHhhHHHHHHHHHHHHc-----CCcEEEeeccEEE
Confidence            4568899999999999998653     3689999996543

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=97.14  E-value=0.0072  Score=43.68  Aligned_cols=107  Identities=10%  Similarity=-0.004  Sum_probs=64.2

Q ss_pred             ccccccCC--cEEEEeecChhh---HHHHHHHHHhcCC-------CceEEEEecCCCHH---HHHHHHHHHHhhcCCccE
Q 040927            2 KRSNQVHY--SMGEATTKDEKR---GLAAVEKLKNSGC-------DNVIFHLLDVTDPA---SVDSLVHFVSSQFGKLDI   66 (147)
Q Consensus         2 ~~~l~~~G--~~v~l~~r~~~~---~~~~~~~l~~~~~-------~~~~~~~~D~~~~~---~~~~~~~~~~~~~g~id~   66 (147)
                      ++.|.++|  ++|+++.|+...   .+++.+.+.....       .++.++.+|++++.   +... ...+.   ..+|.
T Consensus        16 ~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~-~~~~~---~~~d~   91 (367)
T TIGR01746        16 LEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAE-WERLA---ENVDT   91 (367)
T ss_pred             HHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHH-HHHHH---hhCCE
Confidence            46677888  779999997642   2233333322110       25888999998753   1111 12222   46788


Q ss_pred             E---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           67 L---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        67 l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      +   ++.....        ..++...++|+.++..+++.+...    +..+++++||....
T Consensus        92 vih~a~~~~~~--------~~~~~~~~~nv~g~~~ll~~a~~~----~~~~~v~iSS~~v~  140 (367)
T TIGR01746        92 IVHNGALVNWV--------YPYSELRAANVLGTREVLRLAASG----RAKPLHYVSTISVL  140 (367)
T ss_pred             EEeCCcEeccC--------CcHHHHhhhhhHHHHHHHHHHhhC----CCceEEEEcccccc
Confidence            8   4433111        123556789999999998887653    23459999997654

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=97.14  E-value=0.0022  Score=45.53  Aligned_cols=98  Identities=17%  Similarity=0.093  Sum_probs=61.4

Q ss_pred             ccccccCCc-EEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYS-MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~-~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++|+ .|++++|.... .. ..++   .   ...+..|+.+.+.++.+.+.   .++.+|++   |+....    
T Consensus        15 ~~~L~~~g~~~v~~~~~~~~~-~~-~~~~---~---~~~~~~d~~~~~~~~~~~~~---~~~~~D~vvh~A~~~~~----   79 (314)
T TIGR02197        15 VKALNERGITDILVVDNLRDG-HK-FLNL---A---DLVIADYIDKEDFLDRLEKG---AFGKIEAIFHQGACSDT----   79 (314)
T ss_pred             HHHHHHcCCceEEEEecCCCc-hh-hhhh---h---heeeeccCcchhHHHHHHhh---ccCCCCEEEECccccCc----
Confidence            567888897 68887765432 11 1111   1   13456788877666554432   34679988   554311    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                         +.++....+++|+.++..+++.+...    + .++|++||..
T Consensus        80 ---~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~v~~SS~~  116 (314)
T TIGR02197        80 ---TETDGEYMMENNYQYSKRLLDWCAEK----G-IPFIYASSAA  116 (314)
T ss_pred             ---cccchHHHHHHHHHHHHHHHHHHHHh----C-CcEEEEccHH
Confidence               12345678899999999999987653    2 4699999964

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK05865 hypothetical protein; Provisional

Probab=97.13  E-value=0.002  Score=51.95  Aligned_cols=86  Identities=16%  Similarity=0.126  Sum_probs=59.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+....      +   .. ++.++.+|++|.+++.++++       .+|++   |+....     
T Consensus        17 a~~Ll~~G~~Vv~l~R~~~~~------~---~~-~v~~v~gDL~D~~~l~~al~-------~vD~VVHlAa~~~~-----   74 (854)
T PRK05865         17 TARLLSQGHEVVGIARHRPDS------W---PS-SADFIAADIRDATAVESAMT-------GADVVAHCAWVRGR-----   74 (854)
T ss_pred             HHHHHHCcCEEEEEECCchhh------c---cc-CceEEEeeCCCHHHHHHHHh-------CCCEEEECCCcccc-----
Confidence            567788999999999874321      1   11 47788999999988877664       36877   543211     


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                               .+++|+.++.++++++.    +.+.+++|++||..
T Consensus        75 ---------~~~vNv~GT~nLLeAa~----~~gvkr~V~iSS~~  105 (854)
T PRK05865         75 ---------NDHINIDGTANVLKAMA----ETGTGRIVFTSSGH  105 (854)
T ss_pred             ---------hHHHHHHHHHHHHHHHH----HcCCCeEEEECCcH
Confidence                     35789999887776654    34446899999863

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=97.02  E-value=0.0027  Score=46.03  Aligned_cols=98  Identities=13%  Similarity=0.083  Sum_probs=60.3

Q ss_pred             ccccccC-CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC-CHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVH-YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT-DPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~-G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|.+. |++|+.++|+.....    .+...  ..+.++.+|++ +.+.+.+++       ..+|++   |+...+ ..
T Consensus        18 ~~~L~~~~~~~V~~~~r~~~~~~----~~~~~--~~~~~~~~Dl~~~~~~~~~~~-------~~~d~ViH~aa~~~~-~~   83 (347)
T PRK11908         18 SKRILETTDWEVYGMDMQTDRLG----DLVNH--PRMHFFEGDITINKEWIEYHV-------KKCDVILPLVAIATP-AT   83 (347)
T ss_pred             HHHHHhCCCCeEEEEeCcHHHHH----HhccC--CCeEEEeCCCCCCHHHHHHHH-------cCCCEEEECcccCCh-HH
Confidence            4556554 799999998754322    22111  24888899998 555544433       247887   443322 11


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      .    .++-+..+++|+.+...+++++...    + .++|++||..
T Consensus        84 ~----~~~p~~~~~~n~~~~~~ll~aa~~~----~-~~~v~~SS~~  120 (347)
T PRK11908         84 Y----VKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSE  120 (347)
T ss_pred             h----hcCcHHHHHHHHHHHHHHHHHHHhc----C-CeEEEEecce
Confidence            1    1122456789999999988887642    3 4799999964

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=96.91  E-value=0.0088  Score=47.30  Aligned_cols=105  Identities=13%  Similarity=0.046  Sum_probs=63.0

Q ss_pred             ccccccC--CcEEEEeecCh--hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVH--YSMGEATTKDE--KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~--G~~v~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|.++  |++|+.+++..  .....+..   .....++.++.+|++|.+.+..++..     ..+|++   |+.....
T Consensus        23 v~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~-----~~~D~ViHlAa~~~~~   94 (668)
T PLN02260         23 ANRLIRNYPDYKIVVLDKLDYCSNLKNLNP---SKSSPNFKFVKGDIASADLVNYLLIT-----EGIDTIMHFAAQTHVD   94 (668)
T ss_pred             HHHHHHhCCCCEEEEEeCCCccchhhhhhh---cccCCCeEEEECCCCChHHHHHHHhh-----cCCCEEEECCCccCch
Confidence            3456555  67888887742  22221111   11112588899999998876655422     368888   5544221


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      .     +..+....+++|+.++..+++++...   ....++|++||..
T Consensus        95 ~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~  134 (668)
T PLN02260         95 N-----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDE  134 (668)
T ss_pred             h-----hhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchH
Confidence            1     11223466789999999998887542   1135799999964

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=96.90  E-value=0.018  Score=40.62  Aligned_cols=97  Identities=21%  Similarity=0.173  Sum_probs=67.1

Q ss_pred             EEEEeecChhhHHHHHHHHHhcCCCceEE---EEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHH
Q 040927           11 MGEATTKDEKRGLAAVEKLKNSGCDNVIF---HLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYEL   84 (147)
Q Consensus        11 ~v~l~~r~~~~~~~~~~~l~~~~~~~~~~---~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~   84 (147)
                      +|.+++.+..-..++.+.+.  +..++..   -.+|++|++.+.+++.+.     ++|++   |+......     -..+
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~--~~~~v~a~~~~~~Ditd~~~v~~~i~~~-----~PDvVIn~AAyt~vD~-----aE~~   69 (281)
T COG1091           2 KILITGANGQLGTELRRALP--GEFEVIATDRAELDITDPDAVLEVIRET-----RPDVVINAAAYTAVDK-----AESE   69 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC--CCceEEeccCccccccChHHHHHHHHhh-----CCCEEEECcccccccc-----ccCC
Confidence            37788888877777777765  2112222   236999999999988875     78998   55442211     1223


Q ss_pred             HHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           85 AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        85 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      -+..+.+|..++.++.+++-..     +..+|++|+-.-.
T Consensus        70 ~e~A~~vNa~~~~~lA~aa~~~-----ga~lVhiSTDyVF  104 (281)
T COG1091          70 PELAFAVNATGAENLARAAAEV-----GARLVHISTDYVF  104 (281)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHh-----CCeEEEeecceEe
Confidence            4678999999999999998654     3679999985533

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=96.87  E-value=0.003  Score=44.77  Aligned_cols=99  Identities=20%  Similarity=0.079  Sum_probs=61.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|..++|.........       . .+.++.+|+++.+.........    .  |.+   ++.......  
T Consensus        17 ~~~L~~~g~~V~~~~r~~~~~~~~~-------~-~~~~~~~d~~~~~~~~~~~~~~----~--d~vih~aa~~~~~~~--   80 (314)
T COG0451          17 VERLLAAGHDVRGLDRLRDGLDPLL-------S-GVEFVVLDLTDRDLVDELAKGV----P--DAVIHLAAQSSVPDS--   80 (314)
T ss_pred             HHHHHhCCCeEEEEeCCCccccccc-------c-ccceeeecccchHHHHHHHhcC----C--CEEEEccccCchhhh--
Confidence            4567777999999988765433221       1 4778889999884443333221    1  666   444322111  


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      ..+  .....+.+|+.++.++++++..    .+..++|+.||..
T Consensus        81 ~~~--~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~  118 (314)
T COG0451          81 NAS--DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVS  118 (314)
T ss_pred             hhh--CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCc
Confidence            111  3456889999999999999876    3446788855544

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=96.82  E-value=0.0019  Score=45.92  Aligned_cols=99  Identities=15%  Similarity=0.169  Sum_probs=58.0

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHh--hcCCccEE---ecCCCcch
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSS--QFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~id~l---ag~~~~~~   75 (147)
                      |++.|.++|++++++.|+.......           .....+|+.|..+.+.+++.+.+  .++.+|++   ||.... .
T Consensus        15 l~~~L~~~g~~~v~~~~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~-~   82 (308)
T PRK11150         15 IVKALNDKGITDILVVDNLKDGTKF-----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSST-T   82 (308)
T ss_pred             HHHHHHhCCCceEEEecCCCcchHH-----------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECceecCC-c
Confidence            3567788898766665543321110           01123566666555555555432  34578988   554322 1


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                         ..+.   +..++.|+.++..+++++...    + .++|++||..
T Consensus        83 ---~~~~---~~~~~~n~~~t~~ll~~~~~~----~-~~~i~~SS~~  118 (308)
T PRK11150         83 ---EWDG---KYMMDNNYQYSKELLHYCLER----E-IPFLYASSAA  118 (308)
T ss_pred             ---CCCh---HHHHHHHHHHHHHHHHHHHHc----C-CcEEEEcchH
Confidence               1122   346899999999999987542    3 3599999864

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=96.68  E-value=0.0052  Score=48.52  Aligned_cols=98  Identities=10%  Similarity=0.003  Sum_probs=60.6

Q ss_pred             ccccccC-CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHH-HHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVH-YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASV-DSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~-G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~-~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|.++ |++|+.++|+......    +..  ..++.++.+|++|.++. ++++       ..+|++   |+.......
T Consensus       332 v~~Ll~~~g~~V~~l~r~~~~~~~----~~~--~~~~~~~~gDl~d~~~~l~~~l-------~~~D~ViHlAa~~~~~~~  398 (660)
T PRK08125        332 TERLLRDDNYEVYGLDIGSDAISR----FLG--HPRFHFVEGDISIHSEWIEYHI-------KKCDVVLPLVAIATPIEY  398 (660)
T ss_pred             HHHHHhCCCcEEEEEeCCchhhhh----hcC--CCceEEEeccccCcHHHHHHHh-------cCCCEEEECccccCchhh
Confidence            4556654 7889888886543221    111  12478888999986542 2222       257888   664422111


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                        .   +..+..+++|+.+...+++++...    + .++|++||..
T Consensus       399 --~---~~~~~~~~~Nv~~t~~ll~a~~~~----~-~~~V~~SS~~  434 (660)
T PRK08125        399 --T---RNPLRVFELDFEENLKIIRYCVKY----N-KRIIFPSTSE  434 (660)
T ss_pred             --c---cCHHHHHHhhHHHHHHHHHHHHhc----C-CeEEEEcchh
Confidence              1   122456789999999999998653    2 4799999964

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=96.62  E-value=0.046  Score=38.88  Aligned_cols=95  Identities=17%  Similarity=0.081  Sum_probs=60.8

Q ss_pred             EEEEeecChhhHHHHHHHHHhcCCCceEE-------EEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcc
Q 040927           11 MGEATTKDEKRGLAAVEKLKNSGCDNVIF-------HLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQ   80 (147)
Q Consensus        11 ~v~l~~r~~~~~~~~~~~l~~~~~~~~~~-------~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~   80 (147)
                      +|.+++.+..-...+.+.+.+.+  ++..       +..|++|.+.+.++++..     .+|++   |+......     
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g--~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~Aa~~~~~~-----   69 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG--NLIALDVHSTDYCGDFSNPEGVAETVRKI-----RPDVIVNAAAHTAVDK-----   69 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC--CEEEeccccccccCCCCCHHHHHHHHHhc-----CCCEEEECCccCCcch-----
Confidence            46777777666666767666554  2322       236999998887776542     57888   55442211     


Q ss_pred             cHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           81 TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        81 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      ...+-+..+.+|+.++..+.+++...    + .++|++||..
T Consensus        70 ~~~~~~~~~~~N~~~~~~l~~aa~~~----g-~~~v~~Ss~~  106 (299)
T PRK09987         70 AESEPEFAQLLNATSVEAIAKAANEV----G-AWVVHYSTDY  106 (299)
T ss_pred             hhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEccce
Confidence            11122456688999999999987653    2 4689998854

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=96.58  E-value=0.012  Score=40.68  Aligned_cols=102  Identities=11%  Similarity=0.037  Sum_probs=51.8

Q ss_pred             ccccCCc--EEEEeecChh---hHHHHHHHHHhcC---------CCceEEEEecCCCHH-HH-HHHHHHHHhhcCCccEE
Q 040927            4 SNQVHYS--MGEATTKDEK---RGLAAVEKLKNSG---------CDNVIFHLLDVTDPA-SV-DSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         4 ~l~~~G~--~v~l~~r~~~---~~~~~~~~l~~~~---------~~~~~~~~~D~~~~~-~~-~~~~~~~~~~~g~id~l   67 (147)
                      .|.+.+.  +|+++.|..+   ..+++.+.+...+         ..++.++.+|++++. .+ ....+.+.+   .+|++
T Consensus        15 ~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~~~~L~~---~v~~I   91 (249)
T PF07993_consen   15 ELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDEDYQELAE---EVDVI   91 (249)
T ss_dssp             HHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHHHHHHHH---H--EE
T ss_pred             HHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHHhhcccc---cccee
Confidence            3444444  8999999753   2334433332211         347999999999864 11 111233322   46777


Q ss_pred             ---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcC
Q 040927           68 ---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS  120 (147)
Q Consensus        68 ---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  120 (147)
                         |+......+        ++...++|+.|+..+++.+..    .+..+++++||
T Consensus        92 iH~Aa~v~~~~~--------~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iST  135 (249)
T PF07993_consen   92 IHCAASVNFNAP--------YSELRAVNVDGTRNLLRLAAQ----GKRKRFHYIST  135 (249)
T ss_dssp             EE--SS-SBS-S----------EEHHHHHHHHHHHHHHHTS----SS---EEEEEE
T ss_pred             eecchhhhhccc--------chhhhhhHHHHHHHHHHHHHh----ccCcceEEecc
Confidence               444322222        234678999999999998762    22237999999

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=96.47  E-value=0.016  Score=42.55  Aligned_cols=99  Identities=15%  Similarity=0.033  Sum_probs=55.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|+.++|.....      +..... ...++.+|++|.+.+..++.       .+|++   |+.... ....
T Consensus        38 ~~~L~~~G~~V~~v~r~~~~~------~~~~~~-~~~~~~~Dl~d~~~~~~~~~-------~~D~Vih~Aa~~~~-~~~~  102 (370)
T PLN02695         38 ARRLKAEGHYIIASDWKKNEH------MSEDMF-CHEFHLVDLRVMENCLKVTK-------GVDHVFNLAADMGG-MGFI  102 (370)
T ss_pred             HHHHHhCCCEEEEEEeccccc------cccccc-cceEEECCCCCHHHHHHHHh-------CCCEEEEcccccCC-cccc
Confidence            455666677777776643210      000000 14567789998776655442       46877   543311 1111


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      ..   +....+..|+.++.++++++...    +..++|++||..
T Consensus       103 ~~---~~~~~~~~N~~~t~nll~aa~~~----~vk~~V~~SS~~  139 (370)
T PLN02695        103 QS---NHSVIMYNNTMISFNMLEAARIN----GVKRFFYASSAC  139 (370)
T ss_pred             cc---CchhhHHHHHHHHHHHHHHHHHh----CCCEEEEeCchh
Confidence            11   12345678999999998886532    335799999864

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=96.39  E-value=0.011  Score=41.74  Aligned_cols=69  Identities=16%  Similarity=0.112  Sum_probs=44.5

Q ss_pred             EecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEE
Q 040927           41 LLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVN  117 (147)
Q Consensus        41 ~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~  117 (147)
                      .+|++|.+++.++++.     ..+|++   |+.......    ..++....+++|+.++..+++.+...    +.+++|+
T Consensus        32 ~~Dl~~~~~l~~~~~~-----~~~d~Vih~A~~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~   98 (306)
T PLN02725         32 ELDLTRQADVEAFFAK-----EKPTYVILAAAKVGGIHA----NMTYPADFIRENLQIQTNVIDAAYRH----GVKKLLF   98 (306)
T ss_pred             cCCCCCHHHHHHHHhc-----cCCCEEEEeeeeecccch----hhhCcHHHHHHHhHHHHHHHHHHHHc----CCCeEEE
Confidence            4799998888777655     256877   554311010    01122356788999999998887643    3357999


Q ss_pred             EcCCC
Q 040927          118 ASSSM  122 (147)
Q Consensus       118 isS~~  122 (147)
                      +||..
T Consensus        99 ~SS~~  103 (306)
T PLN02725         99 LGSSC  103 (306)
T ss_pred             eCcee
Confidence            99864

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=96.35  E-value=0.028  Score=39.96  Aligned_cols=72  Identities=22%  Similarity=0.152  Sum_probs=52.9

Q ss_pred             ceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC
Q 040927           36 NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS  112 (147)
Q Consensus        36 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  112 (147)
                      +..++..|++|.+.+.+++.+-     .+|.+   |+-+.-     +.+..+-+..+++|+.|++.|++++..+...   
T Consensus        52 ~~~fv~~DI~D~~~v~~~~~~~-----~~D~VvhfAAESHV-----DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---  118 (340)
T COG1088          52 RYRFVQGDICDRELVDRLFKEY-----QPDAVVHFAAESHV-----DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---  118 (340)
T ss_pred             CceEEeccccCHHHHHHHHHhc-----CCCeEEEechhccc-----cccccChhhhhhcchHHHHHHHHHHHHhccc---
Confidence            6899999999999888887653     67877   543322     2233334567899999999999999888643   


Q ss_pred             CeEEEEcC
Q 040927          113 PRIVNASS  120 (147)
Q Consensus       113 ~~iv~isS  120 (147)
                      -+++.||.
T Consensus       119 frf~HIST  126 (340)
T COG1088         119 FRFHHIST  126 (340)
T ss_pred             ceEEEecc
Confidence            25788876

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=96.28  E-value=0.099  Score=41.50  Aligned_cols=100  Identities=11%  Similarity=-0.023  Sum_probs=67.9

Q ss_pred             CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHH
Q 040927            9 YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELA   85 (147)
Q Consensus         9 G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~   85 (147)
                      ..+|++++.+..-...+.+.+...+- .+.+...|++|.+.+...+...     .+|++   |+...... . +...++-
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~-~v~~~~~~l~d~~~v~~~i~~~-----~pd~Vih~Aa~~~~~~-~-~~~~~~~  451 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGI-AYEYGKGRLEDRSSLLADIRNV-----KPTHVFNAAGVTGRPN-V-DWCESHK  451 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCC-eEEeeccccccHHHHHHHHHhh-----CCCEEEECCcccCCCC-C-ChHHhCH
Confidence            45689999998888888888877664 4545667899988887766543     57888   55432111 1 1122344


Q ss_pred             HHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCC
Q 040927           86 EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS  121 (147)
Q Consensus        86 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  121 (147)
                      ...+++|+.++..+++++...    + .+++++||.
T Consensus       452 ~~~~~~N~~gt~~l~~a~~~~----g-~~~v~~Ss~  482 (668)
T PLN02260        452 VETIRANVVGTLTLADVCREN----G-LLMMNFATG  482 (668)
T ss_pred             HHHHHHHhHHHHHHHHHHHHc----C-CeEEEEccc
Confidence            678899999999999998753    2 346666653

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=96.21  E-value=0.012  Score=40.37  Aligned_cols=82  Identities=13%  Similarity=0.090  Sum_probs=49.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|.++|++|++++|+...        ......++.++.++     +...+.+.+.+.++.+|++   ||... ..+.
T Consensus        32 LA~~L~~~G~~V~li~r~~~~--------~~~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~DivIh~AAvsd-~~~~   97 (229)
T PRK06732         32 IAETFLAAGHEVTLVTTKTAV--------KPEPHPNLSIIEIE-----NVDDLLETLEPLVKDHDVLIHSMAVSD-YTPV   97 (229)
T ss_pred             HHHHHHhCCCEEEEEECcccc--------cCCCCCCeEEEEEe-----cHHHHHHHHHHHhcCCCEEEeCCccCC-ceeh
Confidence            356788899999999876421        11011135555543     2233333344445678988   77663 3556


Q ss_pred             hcccHHHHHHhHHHhhhhH
Q 040927           78 LTQTYELAEKCIQTNYYGN   96 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~   96 (147)
                      ...+.++|..++++|.+..
T Consensus        98 ~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         98 YMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             hhhhhhhhhhhhhhhhhhc
Confidence            6677889999988877543

>PLN02778 3,5-epimerase/4-reductase

Probab=96.19  E-value=0.17  Score=36.13  Aligned_cols=90  Identities=11%  Similarity=-0.021  Sum_probs=61.8

Q ss_pred             CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHH
Q 040927            9 YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELA   85 (147)
Q Consensus         9 G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~   85 (147)
                      ..+|++++.+.--...+...|...|. ++.....|+.|.+.+...++.     ..+|++   ||...... . +...++-
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~-~V~~~~~~~~~~~~v~~~l~~-----~~~D~ViH~Aa~~~~~~-~-~~~~~~p   80 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGI-DFHYGSGRLENRASLEADIDA-----VKPTHVFNAAGVTGRPN-V-DWCESHK   80 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC-EEEEecCccCCHHHHHHHHHh-----cCCCEEEECCcccCCCC-c-hhhhhCH
Confidence            45799999998888888888888775 566566788887776655543     257888   65442211 0 1111234


Q ss_pred             HHhHHHhhhhHHHHHHHHHHh
Q 040927           86 EKCIQTNYYGNKRMCEALIPL  106 (147)
Q Consensus        86 ~~~~~~n~~~~~~l~~~~~~~  106 (147)
                      ...+++|+.++..+++++...
T Consensus        81 ~~~~~~Nv~gt~~ll~aa~~~  101 (298)
T PLN02778         81 VETIRANVVGTLTLADVCRER  101 (298)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh
Confidence            568899999999999998653

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.17  E-value=0.041  Score=43.37  Aligned_cols=105  Identities=14%  Similarity=0.064  Sum_probs=62.0

Q ss_pred             ccccc--cCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHH--HHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQ--VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASV--DSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~--~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~--~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|.  ..|++|++++|+... ..........+..++.++.+|++|++..  ...++.+    ..+|++   ||.... 
T Consensus        17 v~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~~~D~Vih~Aa~~~~-   90 (657)
T PRK07201         17 VSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----GDIDHVVHLAAIYDL-   90 (657)
T ss_pred             HHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----cCCCEEEECceeecC-
Confidence            34555  579999999996432 2222212222213588899999985321  1122222    367888   554321 


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                      .    .+   .....++|+.++..+++++..    .+..++|++||...
T Consensus        91 ~----~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v  128 (657)
T PRK07201         91 T----AD---EEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAV  128 (657)
T ss_pred             C----CC---HHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEecccc
Confidence            1    11   234568899999888888654    23467999998654

>PLN02206 UDP-glucuronate decarboxylase

Probab=96.11  E-value=0.03  Score=42.27  Aligned_cols=33  Identities=27%  Similarity=0.206  Sum_probs=26.0

Q ss_pred             HHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           86 EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        86 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                      ...+++|+.++..+++++...    + .++|++||...
T Consensus       204 ~~~~~~Nv~gt~nLleaa~~~----g-~r~V~~SS~~V  236 (442)
T PLN02206        204 VKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEV  236 (442)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh----C-CEEEEECChHH
Confidence            567899999999999987643    2 37999999653

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=95.80  E-value=0.046  Score=41.19  Aligned_cols=32  Identities=28%  Similarity=0.256  Sum_probs=25.4

Q ss_pred             HHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           86 EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        86 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      ...+++|+.++..++.++...    + .++|++||..
T Consensus       205 ~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~  236 (436)
T PLN02166        205 VKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSE  236 (436)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHH
Confidence            567889999999999887653    2 3799998864

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=95.34  E-value=0.036  Score=46.49  Aligned_cols=125  Identities=13%  Similarity=0.036  Sum_probs=86.2

Q ss_pred             CccccccCCcE-EEEeecChhh---HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            1 MKRSNQVHYSM-GEATTKDEKR---GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         1 ~~~~l~~~G~~-v~l~~r~~~~---~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      |+.+|-.+|++ +++++|+.-+   ....+...+.+|. .+.+-.-|++..+....++++.. +.+++-++   |... .
T Consensus      1784 LaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GV-qV~vsT~nitt~~ga~~Li~~s~-kl~~vGGiFnLA~VL-R 1860 (2376)
T KOG1202|consen 1784 LAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGV-QVQVSTSNITTAEGARGLIEESN-KLGPVGGIFNLAAVL-R 1860 (2376)
T ss_pred             HHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCe-EEEEecccchhhhhHHHHHHHhh-hcccccchhhHHHHH-H
Confidence            35677889998 8888887422   3344555666664 46666668888888888887754 44677666   5555 4


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN  130 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  130 (147)
                      .+.+.+++++.+++.-...+.++.++-+.....--.-  ..+|.+||+..-.|..++
T Consensus      1861 D~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L--dyFv~FSSvscGRGN~GQ 1915 (2376)
T KOG1202|consen 1861 DGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPEL--DYFVVFSSVSCGRGNAGQ 1915 (2376)
T ss_pred             hhhhcccChhHHHhhhccceeeeeehhhhhhhhCccc--ceEEEEEeecccCCCCcc
Confidence            4778889999999999999999998776654332211  468888887765555443

>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli

Probab=95.17  E-value=0.15  Score=33.40  Aligned_cols=67  Identities=12%  Similarity=-0.007  Sum_probs=50.2

Q ss_pred             ccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecC--CCHHHHHHHHHHHHhhcCCccEE-ecCCCc
Q 040927            4 SNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDV--TDPASVDSLVHFVSSQFGKLDIL-GGLPDN   73 (147)
Q Consensus         4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~--~~~~~~~~~~~~~~~~~g~id~l-ag~~~~   73 (147)
                      ...++|.+|++++.+++.++++.+.++..++ .+.++...-  -++++.+.+++.+.+.  .+|++ .|...+
T Consensus        43 ~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP-~l~ivg~~~g~f~~~~~~~i~~~I~~~--~pdiv~vglG~P  112 (172)
T PF03808_consen   43 RAEQRGKRIFLLGGSEEVLEKAAANLRRRYP-GLRIVGYHHGYFDEEEEEAIINRINAS--GPDIVFVGLGAP  112 (172)
T ss_pred             HHHHcCCeEEEEeCCHHHHHHHHHHHHHHCC-CeEEEEecCCCCChhhHHHHHHHHHHc--CCCEEEEECCCC
Confidence            3456789999999999999999999988765 355443321  2677888888888775  78999 777644

Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=95.15  E-value=0.072  Score=38.87  Aligned_cols=52  Identities=15%  Similarity=0.159  Sum_probs=42.8

Q ss_pred             ccCCcEEEEeecChhhHHHHHHHHHhcCCC---ceEEEEecCCCHHHHHHHHHHH
Q 040927            6 QVHYSMGEATTKDEKRGLAAVEKLKNSGCD---NVIFHLLDVTDPASVDSLVHFV   57 (147)
Q Consensus         6 ~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~---~~~~~~~D~~~~~~~~~~~~~~   57 (147)
                      ...|..+.+.+||.+++++..+.+.+..+.   ...++.||.+|+++++++..+.
T Consensus        30 ~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~   84 (423)
T KOG2733|consen   30 VFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA   84 (423)
T ss_pred             cccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh
Confidence            347888999999999999999998876532   2348889999999999998775

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=95.07  E-value=0.065  Score=37.69  Aligned_cols=55  Identities=11%  Similarity=-0.033  Sum_probs=38.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCC-ccEE
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGK-LDIL   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~-id~l   67 (147)
                      ++.|.+.|++|.+..|+.+...        ..  .+..+.+|+.|++++..+++.. +.+.. +|.+
T Consensus        16 v~~L~~~g~~V~~~~R~~~~~~--------~~--~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v   71 (285)
T TIGR03649        16 ARLLQAASVPFLVASRSSSSSA--------GP--NEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAV   71 (285)
T ss_pred             HHHHHhCCCcEEEEeCCCcccc--------CC--CCccccccCCCHHHHHHHHhcc-cCcCCceeEE
Confidence            4667888999999999876431        11  3566778999999998887653 22234 6766

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=94.57  E-value=0.079  Score=35.26  Aligned_cols=57  Identities=12%  Similarity=0.032  Sum_probs=40.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      ++.|++.|++|++++|+.++++++.+++....+  .....+|..+.+++.+.++       ..|++
T Consensus        45 a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~-------~~diV  101 (194)
T cd01078          45 AVLLAREGARVVLVGRDLERAQKAADSLRARFG--EGVGAVETSDDAARAAAIK-------GADVV  101 (194)
T ss_pred             HHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC--CcEEEeeCCCHHHHHHHHh-------cCCEE
Confidence            456778899999999999888888777754332  3455678888777655542       45777

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=94.53  E-value=0.091  Score=37.38  Aligned_cols=104  Identities=13%  Similarity=0.111  Sum_probs=64.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEEecCCCcchhhhccc
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQT   81 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lag~~~~~~~~~~~~   81 (147)
                      +..|++.|-+|++-+|..+---.-.+-+...|  .+.++..|+.|+++++++++.-.   --|+. .|...+...+   +
T Consensus        78 vnklak~GSQviiPyR~d~~~~r~lkvmGdLG--Qvl~~~fd~~DedSIr~vvk~sN---VVINL-IGrd~eTknf---~  148 (391)
T KOG2865|consen   78 VNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLG--QVLFMKFDLRDEDSIRAVVKHSN---VVINL-IGRDYETKNF---S  148 (391)
T ss_pred             HHHHhhcCCeEEEeccCCccchhheeeccccc--ceeeeccCCCCHHHHHHHHHhCc---EEEEe-eccccccCCc---c
Confidence            45688999999999997543222223333344  48999999999999998875521   11111 4543222222   2


Q ss_pred             HHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           82 YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        82 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      .      -++|+.++-.+.+.+-..    +--++|.+|+..+.
T Consensus       149 f------~Dvn~~~aerlAricke~----GVerfIhvS~Lgan  181 (391)
T KOG2865|consen  149 F------EDVNVHIAERLARICKEA----GVERFIHVSCLGAN  181 (391)
T ss_pred             c------ccccchHHHHHHHHHHhh----Chhheeehhhcccc
Confidence            2      256787877777776443    22358888886644

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=94.37  E-value=0.52  Score=34.73  Aligned_cols=74  Identities=18%  Similarity=0.159  Sum_probs=44.9

Q ss_pred             ceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC
Q 040927           36 NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS  112 (147)
Q Consensus        36 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  112 (147)
                      ++.++.+|+.|..++.+.++.       .-++   |+......      ..+-+..+++|+.|+.++...+...    +.
T Consensus        56 ~v~~~~~D~~~~~~i~~a~~~-------~~Vvh~aa~~~~~~~------~~~~~~~~~vNV~gT~nvi~~c~~~----~v  118 (361)
T KOG1430|consen   56 RVTVILGDLLDANSISNAFQG-------AVVVHCAASPVPDFV------ENDRDLAMRVNVNGTLNVIEACKEL----GV  118 (361)
T ss_pred             ceeEEecchhhhhhhhhhccC-------ceEEEeccccCcccc------ccchhhheeecchhHHHHHHHHHHh----CC
Confidence            456666777766666554432       2233   32221111      1145678899999988888887654    45


Q ss_pred             CeEEEEcCCCCCCc
Q 040927          113 PRIVNASSSMGKLK  126 (147)
Q Consensus       113 ~~iv~isS~~~~~~  126 (147)
                      .++|++||..-..+
T Consensus       119 ~~lIYtSs~~Vvf~  132 (361)
T KOG1430|consen  119 KRLIYTSSAYVVFG  132 (361)
T ss_pred             CEEEEecCceEEeC
Confidence            67999999765443

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=93.59  E-value=0.086  Score=37.51  Aligned_cols=58  Identities=17%  Similarity=0.200  Sum_probs=39.8

Q ss_pred             ccccccCCcE-EEEeecCh---hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHYSM-GEATTKDE---KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G~~-v~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      +..|+..|++ |++++|+.   ++++++.+++...+. .+....+|+++.+++...+.       ..|++
T Consensus       142 a~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~-------~~Dil  203 (289)
T PRK12548        142 QVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP-ECIVNVYDLNDTEKLKAEIA-------SSDIL  203 (289)
T ss_pred             HHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC-CceeEEechhhhhHHHhhhc-------cCCEE
Confidence            3456788987 99999986   677777777765543 35566788877666644332       34877

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=93.17  E-value=0.066  Score=37.98  Aligned_cols=106  Identities=16%  Similarity=0.119  Sum_probs=65.3

Q ss_pred             CccccccCCcEEEEeecChh--hHHHHHHHHHh---cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC
Q 040927            1 MKRSNQVHYSMGEATTKDEK--RGLAAVEKLKN---SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD   72 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~--~~~~~~~~l~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~   72 (147)
                      |+..|.++|+.|.-+.|...  ....+  .|..   ....++..+.+|++|...+.++++++     .+|-+   ++-+.
T Consensus        18 La~lLLekGY~VhGi~Rrss~~n~~ri--~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-----~PdEIYNLaAQS~   90 (345)
T COG1089          18 LAELLLEKGYEVHGIKRRSSSFNTPRI--HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-----QPDEIYNLAAQSH   90 (345)
T ss_pred             HHHHHHhcCcEEEEEeeccccCCcccc--eeccccccCCceeEEEeccccchHHHHHHHHhc-----Cchhheecccccc
Confidence            45678899999999887632  22221  2222   12225889999999999998888776     45555   33221


Q ss_pred             cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcC
Q 040927           73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS  120 (147)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  120 (147)
                      -     ..+.++-..+.+++..|+..++.+.--.-  .++.++..-||
T Consensus        91 V-----~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQASt  131 (345)
T COG1089          91 V-----GVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQAST  131 (345)
T ss_pred             c-----cccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEeccc
Confidence            1     22333335677888999999888864332  22345555555

>PRK12320 hypothetical protein; Provisional

Probab=93.10  E-value=0.58  Score=37.56  Aligned_cols=86  Identities=13%  Similarity=0.115  Sum_probs=54.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|....       .  .. ..+.++.+|++|+. +.+++       ..+|.+   ++.. ...   
T Consensus        17 a~~Ll~~G~~Vi~ldr~~~~-------~--~~-~~ve~v~~Dl~d~~-l~~al-------~~~D~VIHLAa~~-~~~---   74 (699)
T PRK12320         17 TRQLIAAGHTVSGIAQHPHD-------A--LD-PRVDYVCASLRNPV-LQELA-------GEADAVIHLAPVD-TSA---   74 (699)
T ss_pred             HHHHHhCCCEEEEEeCChhh-------c--cc-CCceEEEccCCCHH-HHHHh-------cCCCEEEEcCccC-ccc---
Confidence            45677889999999886431       1  11 24788899999873 32222       357887   5432 100   


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                               ..++|+.++.++++++..    .+ .++|++||..|
T Consensus        75 ---------~~~vNv~Gt~nLleAA~~----~G-vRiV~~SS~~G  105 (699)
T PRK12320         75 ---------PGGVGITGLAHVANAAAR----AG-ARLLFVSQAAG  105 (699)
T ss_pred             ---------hhhHHHHHHHHHHHHHHH----cC-CeEEEEECCCC
Confidence                     114789999888888743    23 36999998653

>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family

Probab=92.91  E-value=0.79  Score=30.26  Aligned_cols=66  Identities=9%  Similarity=-0.099  Sum_probs=46.1

Q ss_pred             cccCCcEEEEeecChhhHHHHHHHHHhcCCC-ceEEEEecCCCHHHHHHHHHHHHhhcCCccEE-ecCCCc
Q 040927            5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCD-NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-GGLPDN   73 (147)
Q Consensus         5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-ag~~~~   73 (147)
                      ..++|++|++++.+++.++++.+.+++..+. ++.....-+ ++++-+.+++++.+.  .+|++ .|...+
T Consensus        44 ~~~~~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~g~~g~f-~~~~~~~i~~~I~~s--~~dil~VglG~P  111 (177)
T TIGR00696        44 AGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGAFGPL-EPEERKAALAKIARS--GAGIVFVGLGCP  111 (177)
T ss_pred             HHHcCCeEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCC-ChHHHHHHHHHHHHc--CCCEEEEEcCCc
Confidence            4567899999999999999999999877542 223332233 455566777888764  68988 776534

The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.

>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]

Probab=92.51  E-value=0.93  Score=31.70  Aligned_cols=65  Identities=12%  Similarity=-0.052  Sum_probs=47.4

Q ss_pred             cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEE---ecCCCHHHHHHHHHHHHhhcCCccEE-ecCCCc
Q 040927            5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHL---LDVTDPASVDSLVHFVSSQFGKLDIL-GGLPDN   73 (147)
Q Consensus         5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~---~D~~~~~~~~~~~~~~~~~~g~id~l-ag~~~~   73 (147)
                      .+++|.+|++.+..++-++++...+....+ ...++.   .=++..++ ++++++|.+.  .+|+| .|...+
T Consensus       104 a~~~~~~vfllGgkp~V~~~a~~~l~~~~p-~l~ivg~h~GYf~~~e~-~~i~~~I~~s--~pdil~VgmG~P  172 (253)
T COG1922         104 AAEEGKRVFLLGGKPGVAEQAAAKLRAKYP-GLKIVGSHDGYFDPEEE-EAIVERIAAS--GPDILLVGMGVP  172 (253)
T ss_pred             hCccCceEEEecCCHHHHHHHHHHHHHHCC-CceEEEecCCCCChhhH-HHHHHHHHhc--CCCEEEEeCCCc
Confidence            456689999999999999999999988775 233333   33555555 7888888764  78999 776644

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=92.15  E-value=0.24  Score=36.75  Aligned_cols=51  Identities=10%  Similarity=0.032  Sum_probs=40.4

Q ss_pred             ccccccCC-cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHH
Q 040927            2 KRSNQVHY-SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHF   56 (147)
Q Consensus         2 ~~~l~~~G-~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   56 (147)
                      ++.|+++| .+|++.+|+.++..++.+...    .++....+|+.|.+++.+++++
T Consensus        17 a~~la~~~d~~V~iAdRs~~~~~~i~~~~~----~~v~~~~vD~~d~~al~~li~~   68 (389)
T COG1748          17 AHKLAQNGDGEVTIADRSKEKCARIAELIG----GKVEALQVDAADVDALVALIKD   68 (389)
T ss_pred             HHHHHhCCCceEEEEeCCHHHHHHHHhhcc----ccceeEEecccChHHHHHHHhc
Confidence            45678888 889999999988877655542    2689999999999888777655

>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin)

Probab=91.96  E-value=1.1  Score=27.09  Aligned_cols=67  Identities=12%  Similarity=0.043  Sum_probs=46.0

Q ss_pred             cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhhcCCccEE-ecCC
Q 040927            3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQFGKLDIL-GGLP   71 (147)
Q Consensus         3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~g~id~l-ag~~   71 (147)
                      ..|.+.|++|.+.+-+... +++.+.+..... ++..+.+ ...+.....++.+.+++..+.+-++ .|..
T Consensus        22 ~~l~~~G~~v~~~d~~~~~-~~l~~~~~~~~p-d~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~   90 (121)
T PF02310_consen   22 AYLRKAGHEVDILDANVPP-EELVEALRAERP-DVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPH   90 (121)
T ss_dssp             HHHHHTTBEEEEEESSB-H-HHHHHHHHHTTC-SEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESS
T ss_pred             HHHHHCCCeEEEECCCCCH-HHHHHHHhcCCC-cEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCc
Confidence            3456679999988776533 556666666554 5777777 6677778888888877776666666 5543

Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....

>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional

Probab=91.93  E-value=1  Score=31.32  Aligned_cols=66  Identities=9%  Similarity=-0.061  Sum_probs=45.1

Q ss_pred             ccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE-ecCCCc
Q 040927            6 QVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-GGLPDN   73 (147)
Q Consensus         6 ~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-ag~~~~   73 (147)
                      .++|++|++++.+++.++++.+.++...+-++....--.-++++.+.+++.+.+.  .+|++ .|...+
T Consensus       102 ~~~~~~v~llG~~~~v~~~a~~~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~~s--~~dil~VglG~P  168 (243)
T PRK03692        102 GKEGTPVFLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFERIHAS--GAKIVTVAMGSP  168 (243)
T ss_pred             HhcCCeEEEECCCHHHHHHHHHHHHHHhCCEEEEEeCCCCCHHHHHHHHHHHHhc--CCCEEEEECCCc
Confidence            4578999999999999999988887655323322222222455666778888764  78999 777644

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=91.85  E-value=0.21  Score=34.27  Aligned_cols=47  Identities=17%  Similarity=0.102  Sum_probs=33.0

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHH-HHHhcCCCceEEEEecCCCHHHHHHH
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVE-KLKNSGCDNVIFHLLDVTDPASVDSL   53 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~-~l~~~~~~~~~~~~~D~~~~~~~~~~   53 (147)
                      +|+.|.+.|++|+++.++.+..++... ++      ..+.+.+|.+|++-++++
T Consensus        15 va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~------~~~~v~gd~t~~~~L~~a   62 (225)
T COG0569          15 VARELSEEGHNVVLIDRDEERVEEFLADEL------DTHVVIGDATDEDVLEEA   62 (225)
T ss_pred             HHHHHHhCCCceEEEEcCHHHHHHHhhhhc------ceEEEEecCCCHHHHHhc
Confidence            467899999999999999988776433 22      256666666666555443

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=91.53  E-value=0.26  Score=36.48  Aligned_cols=51  Identities=25%  Similarity=0.253  Sum_probs=35.7

Q ss_pred             ccccccCC-c-EEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHH
Q 040927            2 KRSNQVHY-S-MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVH   55 (147)
Q Consensus         2 ~~~l~~~G-~-~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~   55 (147)
                      ++.|++.+ . +|++.+|+.++++++.+++  .+ .++..+.+|+.|.+++.++++
T Consensus        14 ~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~-~~~~~~~~d~~~~~~l~~~~~   66 (386)
T PF03435_consen   14 ARLLARRGPFEEVTVADRNPEKAERLAEKL--LG-DRVEAVQVDVNDPESLAELLR   66 (386)
T ss_dssp             HHHHHCTTCE-EEEEEESSHHHHHHHHT----TT-TTEEEEE--TTTHHHHHHHHT
T ss_pred             HHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cc-cceeEEEEecCCHHHHHHHHh
Confidence            34566665 4 7999999999888877665  22 369999999999998877653

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN02503 fatty acyl-CoA reductase 2

Probab=91.52  E-value=2.5  Score=33.56  Aligned_cols=73  Identities=11%  Similarity=0.105  Sum_probs=45.1

Q ss_pred             ceEEEEecCCCHH-HH-HHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC
Q 040927           36 NVIFHLLDVTDPA-SV-DSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS  110 (147)
Q Consensus        36 ~~~~~~~D~~~~~-~~-~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~  110 (147)
                      ++..+..|++++. .+ ....+.+.+   .+|++   |+.... .       +..+..+++|+.++.++++.+...-   
T Consensus       193 Ki~~v~GDl~d~~LGLs~~~~~~L~~---~vDiVIH~AA~v~f-~-------~~~~~a~~vNV~GT~nLLelA~~~~---  258 (605)
T PLN02503        193 KLVPVVGNVCESNLGLEPDLADEIAK---EVDVIINSAANTTF-D-------ERYDVAIDINTRGPCHLMSFAKKCK---  258 (605)
T ss_pred             cEEEEEeeCCCcccCCCHHHHHHHHh---cCCEEEECcccccc-c-------cCHHHHHHHHHHHHHHHHHHHHHcC---
Confidence            6888999999872 00 011222222   47888   544321 1       2356788999999999999876431   


Q ss_pred             CCCeEEEEcCCC
Q 040927          111 DSPRIVNASSSM  122 (147)
Q Consensus       111 ~~~~iv~isS~~  122 (147)
                      ....+|++||..
T Consensus       259 ~lk~fV~vSTay  270 (605)
T PLN02503        259 KLKLFLQVSTAY  270 (605)
T ss_pred             CCCeEEEccCce
Confidence            124588888743

>PLN00016 RNA-binding protein; Provisional

Probab=91.50  E-value=0.6  Score=34.41  Aligned_cols=43  Identities=12%  Similarity=-0.027  Sum_probs=27.0

Q ss_pred             CccccccCCcEEEEeecChhhHHHHH-------HHHHhcCCCceEEEEecCCC
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAV-------EKLKNSGCDNVIFHLLDVTD   46 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~D~~~   46 (147)
                      +++.|.++|++|+++.|+......+.       .++...   .+.++.+|+.|
T Consensus        72 lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~---~v~~v~~D~~d  121 (378)
T PLN00016         72 LAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSA---GVKTVWGDPAD  121 (378)
T ss_pred             HHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhc---CceEEEecHHH
Confidence            35678889999999999865422211       122211   36778888865

>PLN02996 fatty acyl-CoA reductase

Probab=90.39  E-value=5.6  Score=30.71  Aligned_cols=69  Identities=12%  Similarity=0.081  Sum_probs=44.7

Q ss_pred             ceEEEEecCCCH-------HHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHH
Q 040927           36 NVIFHLLDVTDP-------ASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIP  105 (147)
Q Consensus        36 ~~~~~~~D~~~~-------~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  105 (147)
                      ++.++.+|++++       +....++       ..+|++   |+.... .       +..+..+++|+.|+..+++++..
T Consensus        85 kv~~i~GDl~~~~LGLs~~~~~~~l~-------~~vD~ViH~AA~v~~-~-------~~~~~~~~~Nv~gt~~ll~~a~~  149 (491)
T PLN02996         85 KVTPVPGDISYDDLGVKDSNLREEMW-------KEIDIVVNLAATTNF-D-------ERYDVALGINTLGALNVLNFAKK  149 (491)
T ss_pred             CEEEEecccCCcCCCCChHHHHHHHH-------hCCCEEEECccccCC-c-------CCHHHHHHHHHHHHHHHHHHHHh
Confidence            688999999854       2233322       247888   554321 1       23466889999999999988764


Q ss_pred             hhccCCCCeEEEEcCCC
Q 040927          106 LLQLSDSPRIVNASSSM  122 (147)
Q Consensus       106 ~l~~~~~~~iv~isS~~  122 (147)
                      .-   +..++|++||..
T Consensus       150 ~~---~~k~~V~vST~~  163 (491)
T PLN02996        150 CV---KVKMLLHVSTAY  163 (491)
T ss_pred             cC---CCCeEEEEeeeE
Confidence            21   224689988865

>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins

Probab=90.14  E-value=2  Score=28.07  Aligned_cols=65  Identities=14%  Similarity=-0.009  Sum_probs=43.8

Q ss_pred             cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEE---ecCCCHHHHHHHHHHHHhhcCCccEE-ecCCCc
Q 040927            5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHL---LDVTDPASVDSLVHFVSSQFGKLDIL-GGLPDN   73 (147)
Q Consensus         5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~---~D~~~~~~~~~~~~~~~~~~g~id~l-ag~~~~   73 (147)
                      ..+++.+|++++.+++.++++.+.++...+ .+.++.   .-.. .++...+++.+.+.  .+|++ .|...+
T Consensus        42 ~~~~~~~v~llG~~~~~~~~~~~~l~~~yp-~l~i~g~~~g~~~-~~~~~~i~~~I~~~--~pdiv~vglG~P  110 (171)
T cd06533          42 AAQKGLRVFLLGAKPEVLEKAAERLRARYP-GLKIVGYHHGYFG-PEEEEEIIERINAS--GADILFVGLGAP  110 (171)
T ss_pred             HHHcCCeEEEECCCHHHHHHHHHHHHHHCC-CcEEEEecCCCCC-hhhHHHHHHHHHHc--CCCEEEEECCCC
Confidence            345689999999999999999888887654 344333   2232 33334467777654  78999 776634

E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=89.59  E-value=1.2  Score=31.16  Aligned_cols=82  Identities=12%  Similarity=-0.029  Sum_probs=46.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.+.|++|++++|+........         ...  ..|... ...       .+.+..+|++   +|......   
T Consensus        15 ~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~--~~~~~~-~~~-------~~~~~~~D~Vvh~a~~~~~~~---   72 (292)
T TIGR01777        15 TQRLTKDGHEVTILTRSPPAGANTK---------WEG--YKPWAP-LAE-------SEALEGADAVINLAGEPIADK---   72 (292)
T ss_pred             HHHHHHcCCEEEEEeCCCCCCCccc---------cee--eecccc-cch-------hhhcCCCCEEEECCCCCcccc---
Confidence            5678889999999999875432110         001  112221 111       1233568888   55431111   


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHH
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIP  105 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~  105 (147)
                      ..+.+..+..+++|+.++..+++++..
T Consensus        73 ~~~~~~~~~~~~~n~~~~~~l~~a~~~   99 (292)
T TIGR01777        73 RWTEERKQEIRDSRIDTTRALVEAIAA   99 (292)
T ss_pred             cCCHHHHHHHHhcccHHHHHHHHHHHh
Confidence            123344566778999998888888754

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=89.44  E-value=0.43  Score=28.67  Aligned_cols=45  Identities=18%  Similarity=0.096  Sum_probs=31.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHH
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSL   53 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   53 (147)
                      ++.|.+.+.+|+++.++.+..++.    ...+   +.++.+|.++++.++++
T Consensus        14 ~~~L~~~~~~vvvid~d~~~~~~~----~~~~---~~~i~gd~~~~~~l~~a   58 (116)
T PF02254_consen   14 AEQLKEGGIDVVVIDRDPERVEEL----REEG---VEVIYGDATDPEVLERA   58 (116)
T ss_dssp             HHHHHHTTSEEEEEESSHHHHHHH----HHTT---SEEEES-TTSHHHHHHT
T ss_pred             HHHHHhCCCEEEEEECCcHHHHHH----Hhcc---cccccccchhhhHHhhc
Confidence            355667677999999998765543    3332   67888999998877654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=89.40  E-value=0.4  Score=35.85  Aligned_cols=55  Identities=11%  Similarity=0.029  Sum_probs=34.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP   71 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~   71 (147)
                      ++.|+++|++|++++++.. ++        ..   .....+|+++.+++.+.+.   +.++.+|++   ||+.
T Consensus       221 A~~l~~~Ga~V~~v~~~~~-~~--------~~---~~~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~  278 (399)
T PRK05579        221 ARAAARRGADVTLVSGPVN-LP--------TP---AGVKRIDVESAQEMLDAVL---AALPQADIFIMAAAVA  278 (399)
T ss_pred             HHHHHHCCCEEEEeCCCcc-cc--------CC---CCcEEEccCCHHHHHHHHH---HhcCCCCEEEEccccc
Confidence            4566777777777776542 10        01   1134579998888766654   557889998   6643

>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB

Probab=89.39  E-value=0.77  Score=30.76  Aligned_cols=44  Identities=9%  Similarity=-0.136  Sum_probs=31.6

Q ss_pred             cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCH
Q 040927            3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP   47 (147)
Q Consensus         3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~   47 (147)
                      ..|+++|+.|..++.+...++.+.+..+..+- .+....+|+.+.
T Consensus        46 lyLA~~G~~VtAvD~s~~al~~l~~~a~~~~l-~i~~~~~Dl~~~   89 (192)
T PF03848_consen   46 LYLASQGFDVTAVDISPVALEKLQRLAEEEGL-DIRTRVADLNDF   89 (192)
T ss_dssp             HHHHHTT-EEEEEESSHHHHHHHHHHHHHTT--TEEEEE-BGCCB
T ss_pred             HHHHHCCCeEEEEECCHHHHHHHHHHHhhcCc-eeEEEEecchhc
Confidence            46889999999999999888876555544444 478888888764

When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=88.07  E-value=3.1  Score=36.05  Aligned_cols=105  Identities=13%  Similarity=0.048  Sum_probs=56.6

Q ss_pred             ccccCC----cEEEEeecChhh---HHHHHHHHHhcC------CCceEEEEecCCCHHH--HHHHHHHHHhhcCCccEE-
Q 040927            4 SNQVHY----SMGEATTKDEKR---GLAAVEKLKNSG------CDNVIFHLLDVTDPAS--VDSLVHFVSSQFGKLDIL-   67 (147)
Q Consensus         4 ~l~~~G----~~v~l~~r~~~~---~~~~~~~l~~~~------~~~~~~~~~D~~~~~~--~~~~~~~~~~~~g~id~l-   67 (147)
                      .|.+.|    ++|+.+.|+...   .+++.+.+...+      ..++.++.+|++++.-  -...+.++.   ..+|.+ 
T Consensus       990 ~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~~l~---~~~d~ii 1066 (1389)
T TIGR03443       990 DLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWSDLT---NEVDVII 1066 (1389)
T ss_pred             HHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHHHHHH---hcCCEEE
Confidence            444444    778888886432   222322222211      1257888899986520  011122222   357777 


Q ss_pred             --ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           68 --GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        68 --ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                        |+....     ..+.   ......|+.|+..+++.+...    +..+++++||.+.
T Consensus      1067 H~Aa~~~~-----~~~~---~~~~~~nv~gt~~ll~~a~~~----~~~~~v~vSS~~v 1112 (1389)
T TIGR03443      1067 HNGALVHW-----VYPY---SKLRDANVIGTINVLNLCAEG----KAKQFSFVSSTSA 1112 (1389)
T ss_pred             ECCcEecC-----ccCH---HHHHHhHHHHHHHHHHHHHhC----CCceEEEEeCeee
Confidence              433211     1122   334457999999998887532    3357999999654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene []

Probab=87.44  E-value=2.3  Score=28.43  Aligned_cols=55  Identities=9%  Similarity=-0.036  Sum_probs=36.3

Q ss_pred             cccccCCcEEEEeecC----hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            3 RSNQVHYSMGEATTKD----EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         3 ~~l~~~G~~v~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      +.+.+.|++++.++-+    +..++++..+++..+    ..+-+|+++.++.....+      -..|++
T Consensus        58 ~~l~~aGadIIAlDaT~R~Rp~~l~~li~~i~~~~----~l~MADist~ee~~~A~~------~G~D~I  116 (192)
T PF04131_consen   58 DALAEAGADIIALDATDRPRPETLEELIREIKEKY----QLVMADISTLEEAINAAE------LGFDII  116 (192)
T ss_dssp             HHHHHCT-SEEEEE-SSSS-SS-HHHHHHHHHHCT----SEEEEE-SSHHHHHHHHH------TT-SEE
T ss_pred             HHHHHcCCCEEEEecCCCCCCcCHHHHHHHHHHhC----cEEeeecCCHHHHHHHHH------cCCCEE
Confidence            4677889999998732    366888888888765    556689998887755432      258998

; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=87.38  E-value=0.73  Score=31.35  Aligned_cols=48  Identities=19%  Similarity=0.135  Sum_probs=31.3

Q ss_pred             cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHH
Q 040927            3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVH   55 (147)
Q Consensus         3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~   55 (147)
                      +.|.+.|++|.++.|+...  ...++++..|   +.++.+|..|++++.++++
T Consensus        16 ~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g---~~vv~~d~~~~~~l~~al~   63 (233)
T PF05368_consen   16 RALLSAGFSVRALVRDPSS--DRAQQLQALG---AEVVEADYDDPESLVAALK   63 (233)
T ss_dssp             HHHHHTTGCEEEEESSSHH--HHHHHHHHTT---TEEEES-TT-HHHHHHHHT
T ss_pred             HHHHhCCCCcEEEEeccch--hhhhhhhccc---ceEeecccCCHHHHHHHHc
Confidence            4566789999999998732  2344555544   4667889888887766653

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>cd02067 B12-binding B12 binding domain (B12-BD)

Probab=86.71  E-value=3.6  Score=24.91  Aligned_cols=67  Identities=15%  Similarity=-0.041  Sum_probs=43.6

Q ss_pred             cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhhcC-CccEE-ecCC
Q 040927            3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQFG-KLDIL-GGLP   71 (147)
Q Consensus         3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~g-~id~l-ag~~   71 (147)
                      ..|...|++|+-.+.+. ..+++.+.+.+... ++..+.+ +-.....+.++++.+++... .+.++ .|..
T Consensus        21 ~~l~~~G~~V~~lg~~~-~~~~l~~~~~~~~p-dvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~   90 (119)
T cd02067          21 RALRDAGFEVIDLGVDV-PPEEIVEAAKEEDA-DAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAI   90 (119)
T ss_pred             HHHHHCCCEEEECCCCC-CHHHHHHHHHHcCC-CEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCC
Confidence            34667899998877553 34566666665554 4665555 45667788888888888744 45555 5543

This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=86.58  E-value=12  Score=35.06  Aligned_cols=133  Identities=14%  Similarity=0.060  Sum_probs=74.1

Q ss_pred             CcEEEEeecChhhHHHHHHHHHhcCCCceEEEE--------------------ecCCCHHHHHHHHHHHHhhcCCccEE-
Q 040927            9 YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHL--------------------LDVTDPASVDSLVHFVSSQFGKLDIL-   67 (147)
Q Consensus         9 G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~--------------------~D~~~~~~~~~~~~~~~~~~g~id~l-   67 (147)
                      |..++++.-.......+.+.|...|. .+..+.                    ..-.|..++..++..+....+.++.+ 
T Consensus      1755 ~~~~~v~~d~~~~~~~L~~~L~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 1833 (2582)
T TIGR02813      1755 GANALVIDDDGHNAGVLAEKLIAAGW-QVAVVRSPWVVSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQIDGFI 1833 (2582)
T ss_pred             CceeEEEcCCcchHHHHHHHHHhCCC-eEEEeeccccccccccccccccccccccccchHHHHHHHHhhhccccccceEE
Confidence            55556655455555667778887775 344431                    11234456666777776666677666 


Q ss_pred             --ecCCCc-chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc--------------
Q 040927           68 --GGLPDN-WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN--------------  130 (147)
Q Consensus        68 --ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~--------------  130 (147)
                        .+.... ..+.....   ....-...+...|.+.|.+.+.+...+++.++.+|+..|..|+...              
T Consensus      1834 ~l~~~~~~~~~~~~~~~---~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~~~~ 1910 (2582)
T TIGR02813      1834 HLQPQHKSVADKVDAIE---LPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQVKAELN 1910 (2582)
T ss_pred             Eeccccccccccccccc---cchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccccccccchh
Confidence              221100 00000011   1111113344567778887777666666889999999888776321              


Q ss_pred             hhhhccccchhhhhccC
Q 040927          131 EWAKGVLSDWMRCRRSI  147 (147)
Q Consensus       131 ~~~~~~~~~~~al~~e~  147 (147)
                      .++..++.+  ++++|+
T Consensus      1911 ~a~l~Gl~K--tl~~E~ 1925 (2582)
T TIGR02813      1911 QAALAGLTK--TLNHEW 1925 (2582)
T ss_pred             hhhHHHHHH--hHHHHC
Confidence            245666666  677664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK04148 hypothetical protein; Provisional

Probab=86.34  E-value=0.76  Score=28.91  Aligned_cols=39  Identities=13%  Similarity=-0.073  Sum_probs=21.5

Q ss_pred             cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHH
Q 040927            3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPA   48 (147)
Q Consensus         3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~   48 (147)
                      ..|++.|++|+.++.++...+.+.+.       .+.++.+|+.+++
T Consensus        33 ~~L~~~G~~ViaIDi~~~aV~~a~~~-------~~~~v~dDlf~p~   71 (134)
T PRK04148         33 KKLKESGFDVIVIDINEKAVEKAKKL-------GLNAFVDDLFNPN   71 (134)
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHh-------CCeEEECcCCCCC
Confidence            34566677777777776543333221       1456666666553

>PRK14968 putative methyltransferase; Provisional

Probab=86.05  E-value=7  Score=25.40  Aligned_cols=43  Identities=12%  Similarity=-0.138  Sum_probs=28.7

Q ss_pred             ccccCCcEEEEeecChhhHHHHHHHHHhcCCCc--eEEEEecCCC
Q 040927            4 SNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDN--VIFHLLDVTD   46 (147)
Q Consensus         4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~--~~~~~~D~~~   46 (147)
                      .+++.|.+|+.++.+++..+...+.+...+..+  +.++.+|+.+
T Consensus        40 ~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~   84 (188)
T PRK14968         40 VAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFE   84 (188)
T ss_pred             HHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccc
Confidence            345568889999999877776666665443212  6777777644

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=82.37  E-value=1.3  Score=34.62  Aligned_cols=44  Identities=7%  Similarity=-0.169  Sum_probs=27.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHH
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDS   52 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   52 (147)
                      ++.|.++|+++++++.|++..++..+    .   ....+.+|.+|++..++
T Consensus       433 a~~L~~~g~~vvvId~d~~~~~~~~~----~---g~~~i~GD~~~~~~L~~  476 (558)
T PRK10669        433 GEKLLAAGIPLVVIETSRTRVDELRE----R---GIRAVLGNAANEEIMQL  476 (558)
T ss_pred             HHHHHHCCCCEEEEECCHHHHHHHHH----C---CCeEEEcCCCCHHHHHh
Confidence            45667778888888888766554432    1   25566667776655433

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=82.10  E-value=5.3  Score=29.69  Aligned_cols=105  Identities=10%  Similarity=0.061  Sum_probs=58.4

Q ss_pred             cccCCcEEEEeecChh---hHHHHHHHHH------hcCCCceEEEEecCCCHH--HHHHHHHHHHhhcCCccEE--ec-C
Q 040927            5 NQVHYSMGEATTKDEK---RGLAAVEKLK------NSGCDNVIFHLLDVTDPA--SVDSLVHFVSSQFGKLDIL--GG-L   70 (147)
Q Consensus         5 l~~~G~~v~l~~r~~~---~~~~~~~~l~------~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~~~g~id~l--ag-~   70 (147)
                      |.+.-++|+...|-.+   ..+++.+.+.      +...+++..+..|++.+.  =-+.-++++.   ..+|.|  .| .
T Consensus        21 L~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La---~~vD~I~H~gA~   97 (382)
T COG3320          21 LDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELA---ENVDLIIHNAAL   97 (382)
T ss_pred             HhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHHHh---hhcceEEecchh
Confidence            3344578888877432   2344444433      233457999999998532  1111122222   357888  33 2


Q ss_pred             CCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           71 PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      .....|     +   .+....|+.|+..+++.+.-.    +...+.+|||++..
T Consensus        98 Vn~v~p-----Y---s~L~~~NVlGT~evlrLa~~g----k~Kp~~yVSsisv~  139 (382)
T COG3320          98 VNHVFP-----Y---SELRGANVLGTAEVLRLAATG----KPKPLHYVSSISVG  139 (382)
T ss_pred             hcccCc-----H---HHhcCcchHhHHHHHHHHhcC----CCceeEEEeeeeec
Confidence            212222     2   344567999998888876532    22348999997743

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	147
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		7e-29
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		1e-10
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		5e-10
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		2e-09
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		3e-08
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		7e-05
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		1e-04
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		2e-04
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-04
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-04
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		6e-04

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score =  122 bits (306), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 73/158 (46%), Positives = 93/158 (58%), Gaps = 33/158 (20%)
Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP-ASVDSLVHFVSSQFGKLDIL---GGL 70
           T +D  +G  AVEKLKNS  +NV+FH LDVTDP A++ SL  F+ + FGKLDIL    G+
Sbjct: 42  TCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGV 101
Query: 71  P------DNWYKM-----------------------LTQTYELAEKCIQTNYYGNKRMCE 101
                  D +  M                       +++TYELAE+C++ NY G K + E
Sbjct: 102 AGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTE 161
Query: 102 ALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSD 139
            LIPLLQLSDSPRIVN SSS G LK ++NE A  +L D
Sbjct: 162 VLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGD 199

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
           T +D  RG AAV++L+  G     FH LD+ D  S+ +L  F+  ++G LD+L       
Sbjct: 35  TARDVTRGQAAVQQLQAEGLSPR-FHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA 93
Query: 75  YKMLTQT--YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
           +K+   T  +  AE  ++TN++G + +C  L+PL++     R+VN SS M
Sbjct: 94  FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQG--RVVNVSSIM 141

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
           T +D  RG AAV++L+  G  +  FH LD+ D  S+ +L  F+  ++G LD+L       
Sbjct: 35  TARDVARGQAAVKQLQAEGL-SPRFHQLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIA 93
Query: 75  YKM--LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
           +++   T  +  AE  ++TN+ G + +C  L+PL++     R+VN SS+ G
Sbjct: 94  FQLDNPTPFHIQAELTMKTNFMGTRNVCTELLPLIKPQG--RVVNVSSTEG 142

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
           T +D  RG AAV++L+  G  +  FH LD+ D  S+ +L  F+  ++G LD+L       
Sbjct: 35  TARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA 93
Query: 75  YKMLTQT--YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
           +K+   T  +  AE  ++TN++G + +   L+PL++     R+VN SS M
Sbjct: 94  FKVADPTPFHIQAEVTMKTNFFGTRDVXTELLPLIKPQG--RVVNVSSIM 141

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
           T +D  RG AAV++L+  G  +  FH LD+ D  S+ +L  F+  ++G L++L       
Sbjct: 33  TARDVARGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLNVLVNNAAVA 91
Query: 75  YKML-TQTYEL-AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
           +K      +++ AE  ++TN++  + MC  L+P+++     R+VN SS
Sbjct: 92  FKSDDPMPFDIKAEMTLKTNFFATRNMCNELLPIMKPHG--RVVNISS 137

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 36  NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQ-TYELAEKCIQT 91
             + H++D+T+  SV +L+ F    FG+LDI+       D    ++TQ T ++ +     
Sbjct: 58  GAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTV 117
Query: 92  NYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
           N  G   MC+  IP L  +    IVN SS+
Sbjct: 118 NARGTMLMCKYAIPRLISAGGGAIVNISSA 147

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 41  LLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGN 96
           +L+VTDPAS++S++  + ++FG++DIL    G   DN   ++    E     I+TN    
Sbjct: 57  MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSV 114
Query: 97  KRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
            R+ +A++  +      RI+   S +G + N
Sbjct: 115 FRLSKAVMRAMMKKRHGRIITIGSVVGTMGN 145

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 41  LLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGN 96
           +L+VTDPAS++S++  + ++FG++DIL    G   DN   ++    E     I+TN    
Sbjct: 57  MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSV 114
Query: 97  KRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
            R+ +A++  +      RI+   S +G + N
Sbjct: 115 FRLSKAVMRAMMKKRHGRIITIGSVVGTMGN 145

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 25  AVEKL-KNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYE 83
           A +KL +  G + + F   DV++   V  L+  V  +FGKLD +        +   + + 
Sbjct: 61  AAQKLTEKYGVETMAFRC-DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFP 119
Query: 84  LAE--KCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
           L E  + I+ N +G   +C     LL+ SD+P I+N  S
Sbjct: 120 LDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS 158

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 11  MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--- 67
           +G ATT+    G+ A    K +G +     +L+V D  +VD+LV     +FG L++L   
Sbjct: 56  IGTATTEAGAEGIGAA--FKQAGLEGR-GAVLNVNDATAVDALVESTLKEFGALNVLVNN 112
Query: 68  GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
            G+  +   M  +  E  +  I TN     R+  A++  +  +   RIVN +S +G   N
Sbjct: 113 AGITQDQLAMRMKDDEW-DAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN 171

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 19  EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNW 74
           +++  A VE++K  G D+      +V D   V +++  V SQFG LD+L    G   DN 
Sbjct: 45  KEKAEAVVEEIKAKGVDSFAIQA-NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL 103
Query: 75  Y-KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
             +M  Q +   +  I TN  G     +   P +    S  I+N SS +G + N
Sbjct: 104 LMRMKEQEW---DDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN 154

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	147
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	3e-36
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-33
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	3e-17
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	1e-15
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	3e-15
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	2e-14
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	6e-14
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-13
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	5e-13
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	6e-13
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	7e-13
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-12
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	1e-12
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-12
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	2e-12
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-12
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-12
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	3e-12
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-12
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	4e-12
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	5e-12
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	5e-12
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	5e-12
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	5e-12
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	6e-12
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	7e-12
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	7e-12
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	7e-12
1xhl_A	297	Short-chain dehydrogenase/reductase family member	8e-12
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-11
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-11
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-11
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	2e-11
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-11
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	2e-11
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-11
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	3e-11
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	3e-11
1spx_A	278	Short-chain reductase family member (5L265); paral	4e-11
1xq1_A	266	Putative tropinone reducatse; structural genomics,	4e-11
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	5e-11
1xkq_A	280	Short-chain reductase family member (5D234); parra	5e-11
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	6e-11
4dqx_A	277	Probable oxidoreductase protein; structural genomi	6e-11
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-11
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	7e-11
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	8e-11
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	9e-11
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	9e-11
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	1e-10
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-10
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	1e-10
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-10
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-10
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-10
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-10
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-10
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-10
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	3e-10
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	4e-10
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	4e-10
3rih_A	293	Short chain dehydrogenase or reductase; structural	4e-10
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	4e-10
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	5e-10
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	5e-10
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	5e-10
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	5e-10
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	6e-10
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	6e-10
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	9e-10
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-09
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-09
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-09
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-09
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-09
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	3e-09
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-09
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-09
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	4e-09
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-09
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-09
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	5e-09
4e4y_A	244	Short chain dehydrogenase family protein; structur	6e-09
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	6e-09
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	6e-09
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	7e-09
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	8e-09
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	8e-09
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	8e-09
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	8e-09
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	1e-08
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-08
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-08
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-08
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-08
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-08
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-08
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-08
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	3e-08
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	3e-08
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	4e-08
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	4e-08
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	4e-08
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	5e-08
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	5e-08
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	6e-08
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	7e-08
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	9e-08
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-07
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-07
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-07
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	1e-07
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-07
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-07
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-07
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-07
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-07
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-07
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-07
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	3e-07
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-07
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	4e-07
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	4e-07
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	5e-07
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	5e-07
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	7e-07
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	7e-07
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	7e-07
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	7e-07
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	8e-07
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	1e-06
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-06
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-06
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-06
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-06
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-06
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-06
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-06
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-06
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-06
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	4e-06
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	4e-06
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	4e-06
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	4e-06
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	4e-06
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	5e-06
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	6e-06
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	6e-06
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	6e-06
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	6e-06
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	6e-06
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	6e-06
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-06
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	7e-06
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	8e-06
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	8e-06
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	8e-06
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	9e-06
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-05
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-05
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-05
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-05
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	2e-05
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-05
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	3e-05
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	3e-05
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	4e-05
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	4e-05
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	8e-05
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	8e-05
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-04
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	1e-04
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-04
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-04
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-04
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	4e-04
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	6e-04
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	6e-04
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	7e-04
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	8e-04
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	9e-04

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  124 bits (314), Expect = 3e-36
 Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 7/125 (5%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
           D  RG AAV++L+  G  +  FH LD+ D  S+ +L  F+  ++G LD+L    G+    
Sbjct: 38  DVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKV 96

Query: 75  YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAK 134
               T  +  AE  ++TN++G + +C  L+PL++     R+VN SS M      +     
Sbjct: 97  AD-PTPFHIQAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSIMSVRALKSCSPEL 153

Query: 135 GVLSD 139
                
Sbjct: 154 QQKFR 158

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  118 bits (298), Expect = 1e-33
 Identities = 69/155 (44%), Positives = 88/155 (56%), Gaps = 33/155 (21%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDP-ASVDSLVHFVSSQFGKLDIL--------- 67
           D  +G  AVEKLKNS  +NV+FH LDVTDP A++ SL  F+ + FGKLDIL         
Sbjct: 45  DVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGF 104

Query: 68  -----------------------GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALI 104
                                          +++++TYELAE+C++ NY G K + E LI
Sbjct: 105 SVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLI 164

Query: 105 PLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSD 139
           PLLQLSDSPRIVN SSS G LK ++NE A  +L D
Sbjct: 165 PLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGD 199

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 74.7 bits (184), Expect = 3e-17
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 16/119 (13%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG--KLDIL---GGLPDNWY 75
           R +    +LK+     V    L VT   S+D+ V  V    G   L +L    G+  ++ 
Sbjct: 37  RDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYG 96

Query: 76  KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-----------DSPRIVNASSSMG 123
                   +  + +  N      + + L+PLL+ +               ++  SS +G
Sbjct: 97  TNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 70.2 bits (173), Expect = 1e-15
 Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 17  KDEKRGLAAVEKLKNSGCDNVIFHLLD--VTDPASVDSLVHFVSSQFGKLDIL----GGL 70
           ++E++       +         + +LD       +   L   ++  + +LD +    G L
Sbjct: 44  RNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLL 103

Query: 71  PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
            D    M  Q  ++ +  +Q N      + +AL+PLL  SD+  +V  SSS+G
Sbjct: 104 GDV-CPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVG 155

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 69.1 bits (170), Expect = 3e-15
 Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 7/113 (6%)

Query: 17  KDEKRGLAAVEKLKNSG--CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGL 70
           + E       +++K++G     +I   L+         L   V  +FG+LD L      +
Sbjct: 46  RTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASII 105

Query: 71  PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
                 +     E   + +  N      +  AL+PLL+ S+   I   SSS+G
Sbjct: 106 GPR-TPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVG 157

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 67.2 bits (165), Expect = 2e-14
 Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 7/115 (6%)

Query: 18  DEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPD 72
           D +R  AA   L+       +   + DV D   V +         G   IL    G    
Sbjct: 41  DGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRV 100

Query: 73  NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
           +       T E   + +Q  ++       A +P L+      IV  +S +     
Sbjct: 101 S--TFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE 153

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 65.6 bits (161), Expect = 6e-14
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
              R   A   LK      V+   +DV  P  VD++V  V S FG  DIL    G   + 
Sbjct: 40  QVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNE 99

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
              ++    E  +   +       R+   L+P ++      I++ +S    
Sbjct: 100 --TIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAV 148

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 63.9 bits (156), Expect = 3e-13
 Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 18/126 (14%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG--KLDIL---G 68
            T ++ ++    +E L  +   N+    +D+ +  + D LV  +        L++L    
Sbjct: 53  TTCRNREQA-KELEDLAKNH-SNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNA 110

Query: 69  GLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP-----------RIVN 117
           G+     ++     +     +QTN      + +A +PLL+ +               I+N
Sbjct: 111 GIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIIN 170

Query: 118 ASSSMG 123
            SS +G
Sbjct: 171 MSSILG 176

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 62.9 bits (154), Expect = 5e-13
 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 5/111 (4%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G-GLPD 72
             +          ++  D V+    DV D   V++ +     QFG +D+L    G     
Sbjct: 35  SAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNS 94

Query: 73  NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
               + T   E  +K +  N  G    C A++P + L  +  IVN +S   
Sbjct: 95  EAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVAS 145

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 63.0 bits (154), Expect = 6e-13
 Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 7/106 (6%)

Query: 24  AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLT 79
             V      G  +  +    + D    +  V       G LD+L             +  
Sbjct: 67  KVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNT--SLNLFH 124

Query: 80  QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
                  K ++ N+     +  A +P+L+ S +  IV  SS  GK+
Sbjct: 125 DDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKV 169

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 62.5 bits (153), Expect = 7e-13
 Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 8/114 (7%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           +       V++++  G         D+T    + +L  F  S+ GK+DIL    GG    
Sbjct: 44  NADAANHVVDEIQQLGGQ-AFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPK 102

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
                        +  + N +    + + + P ++ +    I+  +S   + KN
Sbjct: 103 ---PFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN 153

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 62.2 bits (152), Expect = 1e-12
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 8/114 (7%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
             +   A    ++ +G    I    +VTD    ++++     QFGK+ +L    GG    
Sbjct: 45  KSEGAEAVAAAIRQAGGK-AIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPK 103

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
            + M        E   + N +   R+ +   P +Q +    I+N SS  G+  N
Sbjct: 104 PFDM---PMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN 154

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 61.7 bits (151), Expect = 1e-12
 Identities = 22/132 (16%), Positives = 34/132 (25%), Gaps = 23/132 (17%)

Query: 11  MGEATTK--------------DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHF 56
           +G A                     G  A + +       + F   D +D      L   
Sbjct: 18  IGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD--QIQFFQHDSSDEDGWTKLFDA 75

Query: 57  VSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS 112
               FG +  L    G   +    +   T     K +  N  G        I  ++    
Sbjct: 76  TEKAFGPVSTLVNNAGIAVNK--SVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL 133

Query: 113 P-RIVNASSSMG 123
              I+N SS  G
Sbjct: 134 GASIINMSSIEG 145

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 61.8 bits (151), Expect = 2e-12
 Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 4/119 (3%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
           DE     AVE L+  G D V   ++DVT+  SV + V  V  Q G++DIL    G+  + 
Sbjct: 46  DEAMATKAVEDLRMEGHD-VSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISE 104

Query: 75  YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWA 133
            K    T     K +  N  G  R C+A+  ++       IV   S  G + N   + A
Sbjct: 105 VKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQA 163

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 61.9 bits (151), Expect = 2e-12
 Identities = 19/116 (16%), Positives = 40/116 (34%), Gaps = 15/116 (12%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--------GG 69
           ++        K K  G   V   ++D ++   + S    V ++ G + IL          
Sbjct: 64  NKHGLEETAAKCKGLGAK-VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTS 122

Query: 70  LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
                  +        EK  + N   +    +A +P +  ++   IV  +S+ G +
Sbjct: 123 ------DLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV 172

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 61.8 bits (151), Expect = 2e-12
 Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 4/111 (3%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
           +        +++   G         DV D A  ++LV     +FG LD      G     
Sbjct: 41  NGNALAELTDEIAGGG-GEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAM 99

Query: 75  YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
            ++ + + E   + + TN        +  +P +       +   SS +G  
Sbjct: 100 GEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT 150

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 61.0 bits (149), Expect = 3e-12
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 4/109 (3%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
            E R    V++L+  G + V+    DV+    V+  V      + ++D+L    G+ D  
Sbjct: 40  LEDRLNQIVQELRGMGKE-VLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGV 98

Query: 75  YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
             +   + EL E+ +  N Y       A+IP++       IVN +S  G
Sbjct: 99  TPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG 147

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 61.0 bits (149), Expect = 3e-12
 Identities = 31/141 (21%), Positives = 53/141 (37%), Gaps = 27/141 (19%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL----GGLPD 72
           +EK     +E  +  G + V   + D+      D L+  V+  F GKL+IL    G +  
Sbjct: 54  NEKELDECLEIWREKGLN-VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIH 112

Query: 73  NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL------- 125
              +    T +     + TN+     + +   PLL+ S +  ++  SS  G         
Sbjct: 113 K--EAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSL 170

Query: 126 ------------KNITNEWAK 134
                       K++  EWAK
Sbjct: 171 YSASKGAINQMTKSLACEWAK 191

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 61.0 bits (149), Expect = 3e-12
 Identities = 16/113 (14%), Positives = 36/113 (31%), Gaps = 10/113 (8%)

Query: 18  DEKRGLAAVEKLKNSGCD-NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPD 72
           + ++  AA  ++ +      V     D+ +P  +D L        G  DIL    GG   
Sbjct: 40  NREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR-DLGGADILVYSTGGPRP 98

Query: 73  N-WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
             + ++  + ++ +    +        +       +      R+V   S    
Sbjct: 99  GRFMELGVEDWDES---YRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLL 148

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 60.6 bits (148), Expect = 4e-12
 Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 7/115 (6%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
            E+R     ++L + G   V   + DVT   +VD+L+     + G+LD+L    G     
Sbjct: 56  HERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQT 115

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIP-LLQLSDSPRIVNASSSMGKLKN 127
              ++  T E  ++ +        R   A +     +     IVN +S +G    
Sbjct: 116 --PVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ 168

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 60.7 bits (148), Expect = 5e-12
 Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 6/112 (5%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
                 A V  L   G   VI    DV+D A  D+L      +FG +D++    G  PD 
Sbjct: 43  STADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDA 102

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
              + T T E        N  G     +A +  L  S S R+V  SS  G +
Sbjct: 103 --PLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI 152

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 60.4 bits (147), Expect = 5e-12
 Identities = 16/117 (13%), Positives = 32/117 (27%), Gaps = 18/117 (15%)

Query: 22  GLAAVEKLKNSGC-----------DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--- 67
           G   V+  K+              +      +  +    + S++  ++S+  K+D     
Sbjct: 35  GAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCA 94

Query: 68  -GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
            GG          +  +  +  I  N Y           LL        V   +S  
Sbjct: 95  AGGWSGG-NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLN--QGGLFVLTGASAA 148

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 60.6 bits (148), Expect = 5e-12
 Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 4/110 (3%)

Query: 18  DEKRGLAAVEKLKNSGCD-NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN 73
             +   A+   +  +  D  V+  + DV+D A V++ V   + +FG++D      G+   
Sbjct: 46  SSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGK 105

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
                + T    +K +  N  G     E ++ +++   S  +VN +S  G
Sbjct: 106 QNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG 155

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 60.3 bits (147), Expect = 5e-12
 Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 4/111 (3%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
           + +    A   ++  G +    ++ DVT   +V   V  V   FGK+D L    G    +
Sbjct: 40  NREALEKAEASVREKGVE-ARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAF 98

Query: 75  YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
             +     +   + +  N  G   + +A+   +   +  RIVN +S  G  
Sbjct: 99  APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK 149

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 60.3 bits (147), Expect = 6e-12
 Identities = 23/110 (20%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
             +R     +++ ++G    +    D+TD A V  LV      +G++D++      +P  
Sbjct: 44  TVERLEDVAKQVTDTGRR-ALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSM 102

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
                  T+E     I+   +G  R+ +   P L+ S    +VN +S + 
Sbjct: 103 -KPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES-KGAVVNVNSMVV 150

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 60.3 bits (147), Expect = 7e-12
 Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 7/112 (6%)

Query: 18  DEKRGLAAVEKLKNSGCD--NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLP 71
           +  +   AV++L+  G +   + +   D+T+       V  V++  G+L  +    GG  
Sbjct: 44  NPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSE 103

Query: 72  DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
           +    +     E   + +  N  G   + +     +        V  SS   
Sbjct: 104 N-IGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAA 154

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 59.9 bits (146), Expect = 7e-12
 Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 7/108 (6%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYK 76
           R    +++ +    + VI  + D+     VD          G  +++    G        
Sbjct: 35  RRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFG--P 92

Query: 77  MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
           +   T E   + +++N      + +  + L+       + N  SS  +
Sbjct: 93  VGVYTAEQIRRVMESNLVSTILVAQQTVRLIG-ERGGVLANVLSSAAQ 139

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 59.8 bits (146), Expect = 7e-12
 Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 24/131 (18%)

Query: 11  MGEATTK--------------DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHF 56
           MG +  +               ++ G A   +L     D   +  LDVT PA   + V  
Sbjct: 19  MGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQPAQWKAAVDT 74

Query: 57  VSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS 112
             + FG L +L    G L      +        ++ +  N  G      A++  ++ +  
Sbjct: 75  AVTAFGGLHVLVNNAGILNIG--TIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGR 132

Query: 113 PRIVNASSSMG 123
             I+N SS  G
Sbjct: 133 GSIINISSIEG 143

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 59.9 bits (146), Expect = 8e-12
 Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 18  DEKRGLAAVEKLKNSGC--DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLP 71
           +E R     +++  +G   + +   + DVT+ +  D +++   ++FGK+DIL    G   
Sbjct: 59  NEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANL 118

Query: 72  DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK 126
            +      Q  EL +K  + N+     M +     L +     IVN SS +   +
Sbjct: 119 ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHL-IKTKGEIVNVSSIVAGPQ 172

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 59.1 bits (144), Expect = 1e-11
 Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 38/141 (26%)

Query: 11  MGEATTKD-EKRG----LAA---------VEKLKNSGCDNVIFHLLDVTDPASVDSLVHF 56
           +GEA  +   + G    L A           +L       V +H LDV+   SV+     
Sbjct: 14  IGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKK 73

Query: 57  VSSQFGKLDIL----GGLP---------DNWYKMLTQTYELAEKCIQTNYYGNKRMCEAL 103
           V  +FG +D++    G            + +++M           I+ N  G  R  +A 
Sbjct: 74  VLERFGDVDVVVANAGLGYFKRLEELSEEEFHEM-----------IEVNLLGVWRTLKAF 122

Query: 104 IPLLQLSDSPRIVNASSSMGK 124
           +  L+ +    +V  S    +
Sbjct: 123 LDSLKRTGGLALVTTSDVSAR 143

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 59.8 bits (145), Expect = 1e-11
 Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 11/133 (8%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           +     +   K       A E+++  G    +  ++DV D   + + V     +FG +DI
Sbjct: 74  IAAKTAQPHPKLLGTIYTAAEEIEAVGGK-ALPCIVDVRDEQQISAAVEKAIKKFGGIDI 132

Query: 67  L----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
           L      +       L    +  +  +  N  G     +A IP L+ S    I+N S  +
Sbjct: 133 LVNNASAISLT--NTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPL 190

Query: 123 GKLKNITNEWAKG 135
                +   W K 
Sbjct: 191 N----LNPVWFKQ 199

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 59.0 bits (144), Expect = 1e-11
 Identities = 29/131 (22%), Positives = 50/131 (38%), Gaps = 24/131 (18%)

Query: 11  MGEATTK--------------DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHF 56
           +G    +               ++ G A   +L   G D   +  LDVT       +V +
Sbjct: 17  LGAEAARQAVAAGARVVLADVLDEEGAATAREL---G-DAARYQHLDVTIEEDWQRVVAY 72

Query: 57  VSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS 112
              +FG +D L    G        + T++ E   K ++ N  G     + +IP ++ +  
Sbjct: 73  AREEFGSVDGLVNNAGISTGM--FLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGG 130

Query: 113 PRIVNASSSMG 123
             IVN SS+ G
Sbjct: 131 GSIVNISSAAG 141

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 59.1 bits (144), Expect = 2e-11
 Identities = 19/112 (16%), Positives = 45/112 (40%), Gaps = 9/112 (8%)

Query: 19  EKRGLAAVEKLKNSG--CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPD 72
           ++      +++  S       I   LD+TD    D+ +  +  ++G +DIL        D
Sbjct: 41  KQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMD 100

Query: 73  NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
                L++  +   K ++ N      + + +  ++++  +  I N +S   K
Sbjct: 101 G---SLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAK 149

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 59.3 bits (144), Expect = 2e-11
 Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 8/113 (7%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           D+     AV  L+  G D     + DV     +  L        G +D++    G +   
Sbjct: 64  DQPALEQAVNGLRGQGFD-AHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAG 122

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP-RIVNASSSMGKL 125
              +    ++     I  + +G+    EA +P L    +   I   +S  G +
Sbjct: 123 --PLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV 173

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 59.0 bits (144), Expect = 2e-11
 Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 6/110 (5%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
            ++     V  L+  G  +V   +  V      + LV    +  G +DIL       P  
Sbjct: 47  KQENVDRTVATLQGEG-LSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPF- 104

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
           +  ++  T E+ +K +  N      M +A++P ++      ++  SS   
Sbjct: 105 FGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGA 154

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 59.0 bits (143), Expect = 2e-11
 Identities = 20/120 (16%), Positives = 38/120 (31%), Gaps = 16/120 (13%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL------- 67
                   + A+         ++    LDV    SVD  +  +  + G++D+L       
Sbjct: 39  IVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHM 98

Query: 68  --GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
             G            T E   +    N    +R+  A +P ++      ++  SSS    
Sbjct: 99  VFGPAEA-------FTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAG 151

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 58.3 bits (142), Expect = 3e-11
 Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 8/110 (7%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
            E     A   +   G    + H++D+T+  SV +L+ F    FG+LDI+          
Sbjct: 44  PETDLAGAAASV---G-RGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPA 99

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
              +   T ++ +     N  G   MC+  IP L  +    IVN SS+  
Sbjct: 100 DMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATA 149

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 58.3 bits (142), Expect = 3e-11
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 20/131 (15%)

Query: 11  MGEATTK--------------DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHF 56
           +GE T K               +  G      + +     + F   DVT    V +LV  
Sbjct: 28  IGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD--VISFVHCDVTKDEDVRNLVDT 85

Query: 57  VSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS 112
             ++ GKLDI+    G L    Y +L    E  ++ +  N YG   + +    ++  +  
Sbjct: 86  TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKK 145

Query: 113 PRIVNASSSMG 123
             IV  +S   
Sbjct: 146 GSIVFTASISS 156

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 58.0 bits (141), Expect = 4e-11
 Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 9/117 (7%)

Query: 18  DEKRGLAAVEKLKNSGC--DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL------GG 69
             +R     +++  +G    NV   + DVT  A  D ++     +FGKLDIL        
Sbjct: 39  HAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAI 98

Query: 70  LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK 126
                     Q+ E  +  +  N      + +  +P L  S    IVN SS    L 
Sbjct: 99  PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLS-STKGEIVNISSIASGLH 154

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 57.9 bits (141), Expect = 4e-11
 Identities = 34/143 (23%), Positives = 50/143 (34%), Gaps = 31/143 (21%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG-KLDIL----GGLPD 72
           +E      + K +  G   V   + D +     + L+  VSS FG KLDIL    G +  
Sbjct: 47  NEYELNECLSKWQKKGFQ-VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS 105

Query: 73  NWYKMLTQTYELAE--KCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL----- 125
                 T  Y   +    I TN      + +   PLL+ S    I+  SS  G +     
Sbjct: 106 K----PTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVG 161

Query: 126 --------------KNITNEWAK 134
                         +N+  EWA 
Sbjct: 162 SIYSATKGALNQLARNLACEWAS 184

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 58.0 bits (141), Expect = 5e-11
 Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 4/109 (3%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
                    +++  +G    I    DV+D   + + V  +  +FG LDI+    G+   W
Sbjct: 61  TRTEVEEVADEIVGAGGQ-AIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVW 119

Query: 75  YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
             +        ++ I  N  G        +P L+      IV  SS  G
Sbjct: 120 APIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSING 168

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 57.6 bits (140), Expect = 5e-11
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 9/111 (8%)

Query: 18  DEKRGLAAVEKLKNSGC--DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLP 71
             +R     + +  SG     V   + DVT     D +++    QFGK+D+L    G   
Sbjct: 39  SSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAI 98

Query: 72  DN-WYKMLT-QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
            + +    T Q  ++  K ++ N      M + + P L ++    IVN SS
Sbjct: 99  PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHL-VASKGEIVNVSS 148

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 57.2 bits (139), Expect = 6e-11
 Identities = 28/140 (20%), Positives = 42/140 (30%), Gaps = 41/140 (29%)

Query: 11  MGEATTKDEKRGLAA-----------VEKLKN--SGCDNVIFHLLDVTDPASVDSLVHFV 57
           +GEAT     R L A            ++L+   +  +  +    DV +       V  +
Sbjct: 17  IGEATA----RLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAM 72

Query: 58  SSQFGKLDIL----GGLP---------DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALI 104
              FG+L  L    G            + W  +           + TN  G        +
Sbjct: 73  EEAFGELSALVNNAGVGVMKPVHELTLEEWRLV-----------LDTNLTGAFLGIRHAV 121

Query: 105 PLLQLSDSPRIVNASSSMGK 124
           P L       IVN  S  GK
Sbjct: 122 PALLRRGGGTIVNVGSLAGK 141

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 57.6 bits (140), Expect = 6e-11
 Identities = 18/110 (16%), Positives = 46/110 (41%), Gaps = 10/110 (9%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           +E   +    ++            +DV+     +S+V   ++++G++D+L    G     
Sbjct: 60  NEDAAVRVANEIG----SKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTG 115

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
              ++T   E  ++ +  N  G     + +IP+++ +    I+N +S   
Sbjct: 116 --NVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA 163

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 57.6 bits (140), Expect = 7e-11
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
                 AA  ++     + V   + DV DP  V +L   V ++F +LD+L    G     
Sbjct: 66  RPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPP 125

Query: 75  YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLL--QLSDSPRIVNASSSMG 123
             +   T+E     +  N  G     +    ++  Q     RI+N  S   
Sbjct: 126 VPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISA 176

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 57.3 bits (139), Expect = 7e-11
 Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 16/112 (14%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---------GGLP 71
           R   A++ L  +  D      LDVTD   +D +   V +++G++D+L         G   
Sbjct: 37  RRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFE 96

Query: 72  DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
           +        T        + + +G  R+  AL+P ++   S  +VN SS  G
Sbjct: 97  ET-------TERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGG 141

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 57.1 bits (139), Expect = 8e-11
 Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 27/141 (19%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL----GGLPD 72
           ++K     + + ++ G   V   + D++  +    L++ V++ F GKL+IL    G +  
Sbjct: 42  NQKELNDCLTQWRSKGFK-VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY 100

Query: 73  NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL------- 125
              +    T E     +  N+     +     P L+ S+   +V  SS  G L       
Sbjct: 101 K--EAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAV 158

Query: 126 ------------KNITNEWAK 134
                       + +  EWAK
Sbjct: 159 YGATKGAMDQLTRCLAFEWAK 179

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 57.2 bits (139), Expect = 9e-11
 Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 5/115 (4%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
                  A    K  G      +  +++DP SV+  +      FG +D+     G     
Sbjct: 67  SHPADEKAEHLQKTYGVH-SKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQ 125

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
             ++    Y+   K I  +  G       +  + + +    ++  SS  GK+ NI
Sbjct: 126 GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNI 180

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 57.2 bits (139), Expect = 9e-11
 Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 10/110 (9%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           D     AA  K+   G        +DV+D   + ++V    + FG +D L    G +   
Sbjct: 62  DGDAADAAATKI---G-CGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLA 117

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
              ++  T E  ++ I  N  G     +   P +       IVN SS  G
Sbjct: 118 --SLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAG 165

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 56.8 bits (138), Expect = 1e-10
 Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 11/113 (9%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
           D+        ++     D  +    D++  A VD+ V    S+FGK+DIL    G+    
Sbjct: 42  DKAGAERVAGEIG----DAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKP 97

Query: 75  YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQL----SDSPRIVNASSSMG 123
                   E  ++ +  N  G   M   LIP  +          I+N +S+  
Sbjct: 98  QNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGA 150

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 56.5 bits (137), Expect = 1e-10
 Identities = 12/110 (10%), Positives = 36/110 (32%), Gaps = 8/110 (7%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           + ++    V +++ +G   ++   LD  +   V + ++        L++     G   + 
Sbjct: 40  NGEKLAPLVAEIEAAGGR-IVARSLDARNEDEVTAFLNAAD-AHAPLEVTIFNVGANVNF 97

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
              +L  T  +  K  +   +           L+      +I    ++  
Sbjct: 98  --PILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATAS 145

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 56.4 bits (137), Expect = 1e-10
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 10/113 (8%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-------GGL 70
           + +   A  +++   G    I   +DV+DP S  ++     ++FG +D L       GG+
Sbjct: 42  NAEAAEAVAKQIVADGGT-AISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGM 100

Query: 71  PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
             +   +LT   E  +K +  N  G      A+   +       IVN SS+  
Sbjct: 101 KLD--FLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAA 151

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 56.5 bits (137), Expect = 2e-10
 Identities = 20/121 (16%), Positives = 44/121 (36%), Gaps = 7/121 (5%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           +     E   K       A ++++ +G    +  + D+ D  +V + V     QFG +DI
Sbjct: 38  LVAKSAEPHPKLPGTIYTAAKEIEEAGGQ-ALPIVGDIRDGDAVAAAVAKTVEQFGGIDI 96

Query: 67  L----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
                  +      +     +  +        G   + ++ IP ++  D+P I+  S  +
Sbjct: 97  CVNNASAINLG--SIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPI 154

Query: 123 G 123
            
Sbjct: 155 R 155

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 12/111 (10%)

Query: 24  AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLT 79
           + +++L+      +   +LDVT    +D       ++  +LD+L    G +      +L 
Sbjct: 41  SKLQELEKYP--GIQTRVLDVTKKKQIDQFA----NEVERLDVLFNVAGFVHHG--TVLD 92

Query: 80  QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN 130
              +  +  +  N      M +A +P +    S  I+N SS    +K + N
Sbjct: 93  CEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVN 143

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 55.9 bits (136), Expect = 2e-10
 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 9/116 (7%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           D      A   ++N G   V+    DV+ P  V++    V S FG+ DIL    G  P  
Sbjct: 38  DLVPAPEAEAAIRNLG-RRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI 96

Query: 74  -WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
            + ++   T+E  +K  + N      M +A +P ++ +   RI+N +S+   LK  
Sbjct: 97  PFDEL---TFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE 149

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 43/141 (30%)

Query: 12  GEATTKDEKRGLAA--------------VEKLKNSGCDNVIFHLLDVTDPASVDSLVHFV 57
           GE  T    R                  +++LK+   DN+    LDV + A+++ ++  +
Sbjct: 13  GECIT----RRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASL 68

Query: 58  SSQFGKLDIL---GGL-----------PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEAL 103
            +++  +DIL    GL            ++W  M           I TN  G   M  A+
Sbjct: 69  PAEWCNIDILVNNAGLALGMEPAHKASVEDWETM-----------IDTNNKGLVYMTRAV 117

Query: 104 IPLLQLSDSPRIVNASSSMGK 124
           +P +   +   I+N  S+ G 
Sbjct: 118 LPGMVERNHGHIINIGSTAGS 138

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 12/110 (10%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
            +    AA+ ++   G    +    D  + A +D L   V ++ G++D+L    GG    
Sbjct: 62  RKDVLDAAIAEI---G-GGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSML 117

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
              +   T E  +     N  G     +  +PLL       +V   S+ G
Sbjct: 118 --PLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLA--RGSSVVLTGSTAG 163

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 55.6 bits (135), Expect = 3e-10
 Identities = 19/124 (15%), Positives = 37/124 (29%), Gaps = 13/124 (10%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GG 69
              K        +  ++  G D   F   D+    +   LV    ++FG +D+L    GG
Sbjct: 37  HGRKAPANIDETIASMRADGGD-AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGG 95

Query: 70  L-PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLL-----QLSDSPRIVNASSSMG 123
           L       +        +  +  N        +  +P L         +  +++  S  G
Sbjct: 96  LVGRK--PLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAG 153

Query: 124 KLKN 127
               
Sbjct: 154 HTGG 157

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 55.2 bits (134), Expect = 3e-10
 Identities = 20/110 (18%), Positives = 33/110 (30%), Gaps = 12/110 (10%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           +E       E+    G   V     D+ D   +  L        G +D+L    G     
Sbjct: 41  NESNIARIREEF---G-PRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELE 96

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
                  +    ++    N  G     + L PL++  +   IV  SS   
Sbjct: 97  --PFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIR--EGGSIVFTSSVAD 142

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 55.3 bits (134), Expect = 4e-10
 Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 4/106 (3%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77
           R  A ++KLK    D   + + D+T+ + +  LV+      GK+D L    G+ +    +
Sbjct: 36  RSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNV 95

Query: 78  LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
                   +K    N++    +    +P L+ + +  +V  SS   
Sbjct: 96  NEIDVNAWKKLYDINFFSIVSLVGIALPELKKT-NGNVVFVSSDAC 140

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 55.3 bits (134), Expect = 4e-10
 Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 31/133 (23%)

Query: 12  GEATTKD-EKRG----LAA--VEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKL 64
           GEA  +   + G    L A  VE+LK     N +   +DVTD  + D+ +      +G  
Sbjct: 29  GEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPA 88

Query: 65  DIL---GGL----------PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD 111
           D +    G+           + W +M              N  G     +A++  ++  +
Sbjct: 89  DAIVNNAGMMLLGQIDTQEANEWQRM-----------FDVNVLGLLNGMQAVLAPMKARN 137

Query: 112 SPRIVNASSSMGK 124
              I+N SS  GK
Sbjct: 138 CGTIINISSIAGK 150

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 55.3 bits (134), Expect = 4e-10
 Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 6/112 (5%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
             +   +   +L   G  NVI   LDV+DP S       V   FG LD++    G  P+ 
Sbjct: 74  SPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEA 133

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
             ++ T T E   + +  N  G     +A +  L  S   R++  SS  G +
Sbjct: 134 --RLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV 183

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 55.5 bits (134), Expect = 4e-10
 Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 21/118 (17%)

Query: 18  DEKRGLAAVEKLKNSGCD-NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--------G 68
            +     A+  L+  G    V+   LDV            V ++FG + IL         
Sbjct: 41  RQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLF 100

Query: 69  GLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP------RIVNASS 120
                   +   +Y+  +  +  N +G        +P +             +VN +S
Sbjct: 101 Q------PIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTAS 152

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 54.9 bits (133), Expect = 5e-10
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 39/136 (28%)

Query: 12  GEATTKD-EKRG----LAA---------VEKLKNSGCDNVIFHLLDVTDPASVDSLVHFV 57
           GE   ++    G    L A           +++++G    +  +LDVTD  SV +     
Sbjct: 17  GEGIARELGVAGAKILLGARRQARIEAIATEIRDAG-GTALAQVLDVTDRHSVAAFAQAA 75

Query: 58  SSQFGKLDIL---GGL----------PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALI 104
              +G++D+L    G+           D W +M           I  N  G      A++
Sbjct: 76  VDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERM-----------IDVNIKGVLWGIGAVL 124

Query: 105 PLLQLSDSPRIVNASS 120
           P+++   S +I+N  S
Sbjct: 125 PIMEAQRSGQIINIGS 140

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 54.9 bits (133), Expect = 5e-10
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 6/90 (6%)

Query: 38  IFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNY 93
           +    D+ + A  D L   V++  G+LDI+    G +     ++   T       +  N 
Sbjct: 69  LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRG--RITETTDADWSLSLGVNV 126

Query: 94  YGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
               R+C A IPL+  +    IVN +S  G
Sbjct: 127 EAPFRICRAAIPLMAAAGGGAIVNVASCWG 156

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 54.8 bits (133), Expect = 5e-10
 Identities = 24/131 (18%), Positives = 43/131 (32%), Gaps = 25/131 (19%)

Query: 11  MGEATTK--------------DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHF 56
           +G    K              +E  G     +L     +  +F   DV+  A    ++  
Sbjct: 18  VGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----ERSMFVRHDVSSEADWTLVMAA 73

Query: 57  VSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS 112
           V  + G L++L    G L      M T   E   + ++ N       C+  I  ++    
Sbjct: 74  VQRRLGTLNVLVNNAGILLPG--DMETGRLEDFSRLLKINTESVFIGCQQGIAAMK-ETG 130

Query: 113 PRIVNASSSMG 123
             I+N +S   
Sbjct: 131 GSIINMASVSS 141

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 54.8 bits (133), Expect = 5e-10
 Identities = 23/115 (20%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           ++    A   ++  +G  + +   +DV+D   V + V       G  D++    G  P  
Sbjct: 35  NDATAKAVASEINQAG-GHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPST 93

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIP-LLQLSDSPRIVNASSSMGKLKN 127
              + + T E+ +K    N  G     +A +    +     +I+NA S  G + N
Sbjct: 94  --PIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN 146

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 54.5 bits (132), Expect = 6e-10
 Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 26/120 (21%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---------G 68
           D ++  A   ++  +G +    H  D++   ++ +    V +  G+ D+L         G
Sbjct: 62  DVEKLRAVEREIVAAGGE-AESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFG 120

Query: 69  GL-----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
           G      P  W  +           I  N      +  A  P +  +    I+N SS  G
Sbjct: 121 GPLHTMKPAEWDAL-----------IAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAG 169

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 54.7 bits (132), Expect = 6e-10
 Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 20/123 (16%)

Query: 14  ATTKDEKRG--LAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---- 67
           AT +D K    L    +       ++    LDV D  SV +    V+   G++D+L    
Sbjct: 34  ATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT--EGRVDVLVCNA 91

Query: 68  -----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
                G L            +     +  N  G  RM +A +P ++   S R++   S  
Sbjct: 92  GLGLLGPLEA-------LGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVG 144

Query: 123 GKL 125
           G +
Sbjct: 145 GLM 147

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 54.1 bits (131), Expect = 9e-10
 Identities = 22/133 (16%), Positives = 42/133 (31%), Gaps = 11/133 (8%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           +      A  K      +A   +  +G    +    D+ +   V + V      FG +DI
Sbjct: 35  IAAKSAVANPKLPGTIHSAAAAVNAAGGQ-GLALKCDIREEDQVRAAVAATVDTFGGIDI 93

Query: 67  L----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
           L      +       L    +  +   Q N  G+    +A +P L  + +P I+  +   
Sbjct: 94  LVNNASAIWLR--GTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPP 151

Query: 123 GKLKNITNEWAKG 135
                +   W   
Sbjct: 152 S----LNPAWWGA 160

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 53.8 bits (130), Expect = 1e-09
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77
           R L A+++      D+ +    DVTDP SV +L      +FG++D+L    G       M
Sbjct: 60  RRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPM 119

Query: 78  LTQTYELAEKCIQTNYYGNKRMCEALIP--LLQLSDSPRIVNASSSMG 123
              T+   ++ + TN  G     +        Q     RI+N  S   
Sbjct: 120 EDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA 167

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 19/114 (16%), Positives = 37/114 (32%), Gaps = 9/114 (7%)

Query: 19  EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN- 73
                    + +  G         D++D A V  L   +  ++G +D L    G      
Sbjct: 43  AADLEKISLECRAEGAL-TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA 101

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
              +  + +   +  + TN  G   + +AL  L++   S  I   +S       
Sbjct: 102 LSDLTEEDF---DYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF 152

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 23/130 (17%)

Query: 11  MGEATTK--------------DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHF 56
           +G    +              DE  G A  ++L        +F L DVT    V +LV  
Sbjct: 21  IGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----PGAVFILCDVTQEDDVKTLVSE 75

Query: 57  VSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP 113
              +FG+LD +    G      +    + +   + ++ N  G   + +  +P L+ S   
Sbjct: 76  TIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QG 134

Query: 114 RIVNASSSMG 123
            ++N SS +G
Sbjct: 135 NVINISSLVG 144

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 27/115 (23%), Positives = 39/115 (33%), Gaps = 11/115 (9%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           D     A V  L+N G        +DVT  ASVD+ +       G  D+L    G     
Sbjct: 45  DVMAAQAVVAGLENGG----FAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMR 100

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP-RIVNASSSMGKLKN 127
               +  T E  +     N  G     +        S++   IVN +S   K+  
Sbjct: 101 --PAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA 153

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 17/106 (16%), Positives = 31/106 (29%), Gaps = 12/106 (11%)

Query: 22  GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKM 77
           G    E +         F  +D+ D       V   +   G++D+L              
Sbjct: 42  GKEVAEAIG------GAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG--SA 93

Query: 78  LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
           LT       + ++ N      +       ++      IVN +S  G
Sbjct: 94  LTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG 139

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 53.0 bits (128), Expect = 3e-09
 Identities = 25/115 (21%), Positives = 36/115 (31%), Gaps = 20/115 (17%)

Query: 18  DEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G-GLP 71
           + + G+     L         +F   DV D   +      V   FG+LDIL    G    
Sbjct: 40  NLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE 99

Query: 72  DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPR---IVNASSSMG 123
            NW           EK +Q N           +  +   +      I+N SS  G
Sbjct: 100 KNW-----------EKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG 143

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 52.9 bits (128), Expect = 3e-09
 Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 4/114 (3%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
             +     V++L+ +       +   V    S + LV  V + FG++D      G   + 
Sbjct: 56  RAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATAD- 114

Query: 75  YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
             +L  + E     +Q +  G     +A+    +   +  +V  +S  G + N 
Sbjct: 115 SGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF 168

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 52.6 bits (127), Expect = 3e-09
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 6/91 (6%)

Query: 37  VIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTN 92
                 DVT+P  V + +  +  ++G + +L    G       K+ + +     + I  N
Sbjct: 48  YDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYG--KIESMSMGEWRRIIDVN 105

Query: 93  YYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
            +G     +  IP +  S  P IVN SS   
Sbjct: 106 LFGYYYASKFAIPYMIRSRDPSIVNISSVQA 136

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 52.6 bits (127), Expect = 4e-09
 Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 8/116 (6%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
            E++    ++ ++ +     +F  LDVTD A+ DS +   + + G  D+L    G     
Sbjct: 37  QEEQAAETIKLIEAAD-QKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIK 95

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMC-EALIPLLQLSDSPRIVNASSSMGKLKNI 128
              +L  T E  ++    N +        A     +L    +I+NA+S        
Sbjct: 96  --PLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFP 149

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 52.6 bits (127), Expect = 4e-09
 Identities = 16/121 (13%), Positives = 37/121 (30%), Gaps = 20/121 (16%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           + Y    A          +V +L+ +G   V  +  D +    + + +  + +Q   L  
Sbjct: 56  ISYRTEHA----------SVTELRQAGA--VALYG-DFSCETGIMAFIDLLKTQTSSLRA 102

Query: 67  L----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
           +                +  +   +    +      +     PLL  S+   IV+ S  +
Sbjct: 103 VVHNASEWLAE---TPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDV 159

Query: 123 G 123
            
Sbjct: 160 T 160

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 52.6 bits (127), Expect = 4e-09
 Identities = 26/125 (20%), Positives = 46/125 (36%), Gaps = 15/125 (12%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           ++Y+                 K++ +G   +     DV+DPA+V  L       FG +D+
Sbjct: 56  INYA------GKAAAAEEVAGKIEAAGGKALTAQA-DVSDPAAVRRLFATAEEAFGGVDV 108

Query: 67  L----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
           L    G +P     +      + ++ I  N  G           L+     RI+N S+S 
Sbjct: 109 LVNNAGIMPLT--TIAETGDAVFDRVIAVNLKGTFNTLREAAQRLR--VGGRIINMSTSQ 164

Query: 123 GKLKN 127
             L +
Sbjct: 165 VGLLH 169

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 52.3 bits (126), Expect = 5e-09
 Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 25/97 (25%)

Query: 42  LDVTDPASVDSLVHFVSSQFGKLDIL---GGL-----------PDNWYKMLTQTYELAEK 87
           LD+T    +   +  +  +F  +DIL    G             ++   +          
Sbjct: 94  LDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDV---------- 143

Query: 88  CIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
              TN      + +A++P+ Q  +S  IVN  S  G+
Sbjct: 144 -FDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR 179

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 51.8 bits (125), Expect = 6e-09
 Identities = 20/120 (16%), Positives = 38/120 (31%), Gaps = 24/120 (20%)

Query: 22  GLAAVEKLKNSGC--------------DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
           G A VE L  +                +N+ F   D+T    + +++  +  +    D +
Sbjct: 17  GKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDII--KNVSFDGI 74

Query: 68  ----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
               G L      +     E  +K +  N + +    + L   L+      IV   S   
Sbjct: 75  FLNAGILIKG--SIFDIDIESIKKVLDLNVWSSIYFIKGLENNLK--VGASIVFNGSDQC 130

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 51.8 bits (125), Expect = 6e-09
 Identities = 22/115 (19%), Positives = 34/115 (29%), Gaps = 16/115 (13%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
             +R           G  N +  + DV              + FGK+D L    G    +
Sbjct: 38  SAERLRELEVAH---G-GNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYS 93

Query: 74  WYKMLTQTYELA-----EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
               L    E       +     N  G     +A +P L +S    +V   S+ G
Sbjct: 94  --TALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPAL-VSSRGSVVFTISNAG 145

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 51.9 bits (125), Expect = 6e-09
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
              R L A  KL  +     +   +DV  P +V + V     +FG++DIL     G   N
Sbjct: 60  SLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAG---N 116

Query: 74  WYKMLTQ-TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
           +       ++   +  +  +  G   +   L           IVN ++++G
Sbjct: 117 FLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLG 167

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 51.8 bits (125), Expect = 7e-09
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 14/122 (11%)

Query: 16  TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-------G 68
             D +     + +L   G   VIF   D+ D +S  + V  V ++FG++D L        
Sbjct: 61  IGDAEGVAPVIAELSGLGAR-VIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIAS 119

Query: 69  GLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLL---QLSDSPRIVNASSSMGKL 125
            + D++  +     E  +  +  N  G     +A++  +       S  I+N +S    +
Sbjct: 120 IVRDDFLDL---KPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM 176

Query: 126 KN 127
            +
Sbjct: 177 TS 178

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 51.8 bits (125), Expect = 8e-09
 Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 31/131 (23%)

Query: 11  MGEATTK--------------DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHF 56
           +G A                 DEK  +   +  K           +DVT+   V   V  
Sbjct: 26  IGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK-----------IDVTNEEEVKEAVEK 74

Query: 57  VSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS 112
            + ++G++DIL    G    +   +     E+  + I  N  G+  M +  IP++     
Sbjct: 75  TTKKYGRIDILVNNAGIEQYS--PLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGH 132

Query: 113 PRIVNASSSMG 123
             I+N +S   
Sbjct: 133 GSIINIASVQS 143

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 51.4 bits (124), Expect = 8e-09
 Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 7/111 (6%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           D     AA   L      +V    +D+ +P +   L    +  FG LD+L    G     
Sbjct: 53  DVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQ 112

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP-RIVNASSSMG 123
              ++    +L +  I  N      +  A+   +  +     I+  +S+  
Sbjct: 113 --PVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAA 161

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 51.6 bits (124), Expect = 8e-09
 Identities = 14/88 (15%), Positives = 26/88 (29%), Gaps = 18/88 (20%)

Query: 43  DVTDPASVDSLV-HFVSSQFGKLDIL------GGLPDNWYKMLTQTYELAEKCIQTNYYG 95
           D++        +   ++     +D L      G                    +  NY+G
Sbjct: 41  DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVL-----------GNVVSVNYFG 89

Query: 96  NKRMCEALIPLLQLSDSPRIVNASSSMG 123
              + +A +P L+    P  V  SS   
Sbjct: 90  ATELMDAFLPALKKGHQPAAVVISSVAS 117

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 51.4 bits (124), Expect = 8e-09
 Identities = 20/124 (16%), Positives = 36/124 (29%), Gaps = 19/124 (15%)

Query: 22  GLAAVEKLKNSGCD-------------NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL- 67
           G A       +G                    ++DV D A V  +   + ++  +LD L 
Sbjct: 20  GYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALV 79

Query: 68  ---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
              G L          + E  ++    N  G   + +  +   +      IV  +S    
Sbjct: 80  NAAGILRMG--ATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAH 137

Query: 125 LKNI 128
              I
Sbjct: 138 TPRI 141

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 29/117 (24%), Positives = 38/117 (32%), Gaps = 21/117 (17%)

Query: 16  TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP-ASVDSLVHFVSSQFGKLDIL----GGL 70
            + E     A  K  N    N+ FH  DVT P A    L+  +  Q   +DIL    G L
Sbjct: 37  DRVENPTALAELKAINPK-VNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL 95

Query: 71  PD-NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPR---IVNASSSMG 123
            D              E+ I  N+ G      A++             I N  S  G
Sbjct: 96  DDHQI-----------ERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG 141

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 50.7 bits (122), Expect = 2e-08
 Identities = 33/140 (23%), Positives = 45/140 (32%), Gaps = 46/140 (32%)

Query: 12  GEATTKDEKRGLAA-----------VEKLKN-----SGCDNVIFHLLDVTDPASVDSLVH 55
           GEA      R  A             E+L+      S    V+   LDV D A++ + V 
Sbjct: 34  GEACA----RRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVD 89

Query: 56  FVSSQFGKLDIL---GGL-----------PDNWYKMLTQTYELAEKCIQTNYYGNKRMCE 101
            +  +F  L  L    GL            D+W  M           + TN  G      
Sbjct: 90  NLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTM-----------VDTNIKGLLYSTR 138

Query: 102 ALIPLLQLSDSPR-IVNASS 120
            L+P L    +   IVN  S
Sbjct: 139 LLLPRLIAHGAGASIVNLGS 158

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 11/109 (10%), Positives = 29/109 (26%), Gaps = 13/109 (11%)

Query: 24  AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWY-KML 78
               + +N G                 + LV         +D +              + 
Sbjct: 41  RQRFESENPGTI--------ALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLE 92

Query: 79  TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
             +     +  +        + ++ I  L+ +    ++  +SS+GK   
Sbjct: 93  GTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL 141

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 11/112 (9%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           D +R   A  ++   G        +DVT   S+D+ +       G LDIL          
Sbjct: 41  DIERARQAAAEI---G-PAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLA 96

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIP-LLQLSDSPRIVNASSSMGK 124
              ++  T E  EK    N  G     +A    ++      +I+N +S  G+
Sbjct: 97  --PIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGR 146

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 50.3 bits (121), Expect = 2e-08
 Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 27/125 (21%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--------GG 69
           D K   AAV+ L+ +G D V     DVT    V + V     +FG + IL        GG
Sbjct: 57  DAKNVSAAVDGLRAAGHD-VDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGG 115

Query: 70  L-----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--SPRIVNASSSM 122
                    W  +           + TN  G  R+   ++    + +    RIVN +S+ 
Sbjct: 116 ETADLDDALWADV-----------LDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTG 164

Query: 123 GKLKN 127
           GK   
Sbjct: 165 GKQGV 169

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 13/125 (10%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           ++Y+      + +K  L   E+++  G   ++    +V  PA +  +   +   FG+LD+
Sbjct: 33  INYA------RSKKAALETAEEIEKLGVKVLVVKA-NVGQPAKIKEMFQQIDETFGRLDV 85

Query: 67  L----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
                         ++       +  +  N        +    L++ +    IV+ SS  
Sbjct: 86  FVNNAASGVLR--PVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLG 143

Query: 123 GKLKN 127
                
Sbjct: 144 SIRYL 148

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 31/112 (27%), Positives = 41/112 (36%), Gaps = 26/112 (23%)

Query: 26  VEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLP---------D 72
            ++L  +G   V    LDV D   VD+ V       G LDIL    G +           
Sbjct: 48  GDELTAAG-AKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTT 106

Query: 73  NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
           +W +M           I TN  G   M  A +P L L     +V  SS  G+
Sbjct: 107 DWTRM-----------IDTNLLGLMYMTRAALPHL-LRSKGTVVQMSSIAGR 146

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 49.9 bits (120), Expect = 2e-08
 Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 25/113 (22%)

Query: 24  AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL---------- 70
            A+ ++   G    + H  D++D A +++L      +FG +DIL    G+          
Sbjct: 41  PALAEIARHG-VKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFP 99

Query: 71  PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
            ++W K+           I  N           +P ++  +  RI+N +S  G
Sbjct: 100 LESWDKI-----------IALNLSAVFHGTRLALPGMRARNWGRIINIASVHG 141

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 16/126 (12%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           + Y+         +    AV +++  G   +     D+T+ A V++ +   + +FG++  
Sbjct: 37  LTYN------GAAEGAATAVAEIEKLGRSALAIKA-DLTNAAEVEAAISAAADKFGEIHG 89

Query: 67  L----GGL-PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
           L    GGL       +         + +  N        +  +P  +++    IV  SS 
Sbjct: 90  LVHVAGGLIARK--TIAEMDEAFWHQVLDVNLTSLFLTAKTALP--KMAKGGAIVTFSSQ 145

Query: 122 MGKLKN 127
            G+   
Sbjct: 146 AGRDGG 151

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 14/113 (12%), Positives = 39/113 (34%), Gaps = 13/113 (11%)

Query: 18  DEKRGLAAVEKLKNSGCD-NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPD 72
            E+     +++++    D  +   + D+        ++     ++ K+DIL    G    
Sbjct: 43  REENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI----EKYPKVDILINNLGIFEP 98

Query: 73  N-WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
             ++ +     E   K  + N     R+  + +  +      R++  +S    
Sbjct: 99  VEYFDI---PDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAI 148

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 49.6 bits (119), Expect = 4e-08
 Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 27/126 (21%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--------GG 69
            E+     +++L+ +G +       DV     +++LV  V  ++G +D+L        GG
Sbjct: 55  GEEGLRTTLKELREAGVE-ADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG 113

Query: 70  L-----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQL--SDSPRIVNASSSM 122
                  + W  +           ++TN  G  R+ + ++    +    + RIVN +S+ 
Sbjct: 114 ATAELADELWLDV-----------VETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG 162

Query: 123 GKLKNI 128
           GK   +
Sbjct: 163 GKQGVV 168

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 49.5 bits (119), Expect = 4e-08
 Identities = 19/125 (15%), Positives = 41/125 (32%), Gaps = 20/125 (16%)

Query: 22  GLAAVEKLKNSGCD--------------NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
           G   V   ++                  ++     D++ P + D +V     +FG++D L
Sbjct: 41  GAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSL 100

Query: 68  ----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
               G         +  T E  +  +  N  G   + +     +    S  IV+ ++S+ 
Sbjct: 101 VNNAGVFLAK--PFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLV 158

Query: 124 KLKNI 128
               +
Sbjct: 159 DQPMV 163

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 49.4 bits (119), Expect = 4e-08
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 13/125 (10%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           +HY       KD        ++L++ G    ++   D+++   V  L  F   +FGK+DI
Sbjct: 40  LHY----HQAKDSDTANKLKDELEDQGAKVALYQS-DLSNEEEVAKLFDFAEKEFGKVDI 94

Query: 67  L----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
                G +      ++  +    +     N        +     +    +  I+  ++S+
Sbjct: 95  AINTVGKVLKK--PIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN--PNGHIITIATSL 150

Query: 123 GKLKN 127
                
Sbjct: 151 LAAYT 155

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 49.5 bits (119), Expect = 5e-08
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 6/120 (5%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
                    +++   G    +    DVT P  V  ++  ++ + G +DI     G+    
Sbjct: 65  HSDALQVVADEIAGVGGK-ALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSV- 122

Query: 75  YKMLTQTYELAEKCIQTNYYGNKRMC-EALIPLLQLSDSPRIVNASSSMGKLKNITNEWA 133
             ML    E  ++   TN  G       A   ++       I+  +S  G + NI  + +
Sbjct: 123 QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVS 182

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 49.1 bits (118), Expect = 5e-08
 Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 9/104 (8%)

Query: 24  AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLT 79
              E +        I  + DV+DP +V+++      +FG+L  +    G           
Sbjct: 42  LLAEAVAALE-AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSA--LSWN 98

Query: 80  QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
              E  EK ++ N  G+  +      +L+  +   +V   S  G
Sbjct: 99  LPLEAWEKVLRVNLTGSFLVARKAGEVLE--EGGSLVLTGSVAG 140

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 49.2 bits (118), Expect = 6e-08
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
                    +++       V+ H  D+T P+ +  ++  V+ +FG  DIL    G     
Sbjct: 59  APDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVE 118

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
             K+     E  ++ I  N   +       IP ++     RI+N +S+ G
Sbjct: 119 --KIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHG 166

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 48.8 bits (117), Expect = 7e-08
 Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 10/91 (10%)

Query: 43  DVTDPASVDSLVHFVSS-QFGKLDIL--------GGLPDNWYK-MLTQTYELAEKCIQTN 92
           D +  + V SL   V   Q G+LD+L          + +   K        + +      
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121

Query: 93  YYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
             G+         L+  +    IV  SS   
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISSPGS 152

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 48.4 bits (116), Expect = 9e-08
 Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 10/113 (8%)

Query: 18  DEKRGLAAVEKLKNSGCDN----VIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GG 69
             +R  +A ++L+ +        VI    ++ +   V++LV      FGK++ L    GG
Sbjct: 51  KLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG 110

Query: 70  LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
              +       + +     ++TN  G   MC+A+           IVN     
Sbjct: 111 QFLS--PAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT 161

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 12/114 (10%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
           D +       +L   G  +      D++  A    L   +     +LDIL    G   +W
Sbjct: 62  DAEACADTATRLSAYG--DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGT--SW 117

Query: 75  YK-MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP----RIVNASSSMG 123
              + +      EK +Q N        + L+PLL+ S S     R++N  S  G
Sbjct: 118 GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAG 171

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 15/123 (12%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           + Y          +R  A V +++ +G   V     D  D  +++  +       G LDI
Sbjct: 60  LTYV------NAAERAQAVVSEIEQAGGRAVAIRA-DNRDAEAIEQAIRETVEALGGLDI 112

Query: 67  L----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
           L    G        +   T    ++ +  N+        +    L   D  RI+   S++
Sbjct: 113 LVNSAGIWHSA--PLEETTVADFDEVMAVNFRAPFVAIRSASRHLG--DGGRIITIGSNL 168

Query: 123 GKL 125
            +L
Sbjct: 169 AEL 171

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 12/87 (13%), Positives = 26/87 (29%), Gaps = 14/87 (16%)

Query: 42  LDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGNK 97
            D+ D     +L+     + G LD+L    G        +     +L E+ +  +     
Sbjct: 49  ADLADELEAKALL----EEAGPLDLLVHAVGKAGRA--SVREAGRDLVEEMLAAHLLT-- 100

Query: 98  RMCEALIPLLQLSDSPRIVNASSSMGK 124
                ++   +     R V   +    
Sbjct: 101 --AAFVLKHARFQKGARAVFFGAYPRY 125

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 24/119 (20%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL---- 70
           D          L       V++   D++   +V  LV     Q G++DIL    G+    
Sbjct: 38  DAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA 97

Query: 71  ------PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
                  + W  +           +  N         A +P ++     RI+N +S+ G
Sbjct: 98  LIEDFPTEKWDAI-----------LALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG 145

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 15/126 (11%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           V+Y+         +     V  +K +G D       +V     +  +       FGKLDI
Sbjct: 58  VNYA------NSTESAEEVVAAIKKNGSDAACVKA-NVGVVEDIVRMFEEAVKIFGKLDI 110

Query: 67  L----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
           +    G +      +   T E  ++    N  G   +       L+     R++   S  
Sbjct: 111 VCSNSGVVSFG--HVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSIT 166

Query: 123 GKLKNI 128
           G+ K +
Sbjct: 167 GQAKAV 172

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 14/111 (12%), Positives = 37/111 (33%), Gaps = 8/111 (7%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
            +++   A  +++      ++   +DV +   +  ++  +  +FG++DIL     G    
Sbjct: 39  TKEKLEEAKLEIEQFPGQ-ILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFIC 97

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP-RIVNASSSMG 123
                  +       I     G     +A+            I+N  ++  
Sbjct: 98  --PAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYA 146

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 15/124 (12%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           V+Y          K     V +LK  G   V     D++ P+ V +L     S FG LD 
Sbjct: 50  VNYG------SSSKAAEEVVAELKKLGAQGVAIQA-DISKPSEVVALFDKAVSHFGGLDF 102

Query: 67  L----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
           +    G         L  T EL +K    N  G   + +  +   +     RI+  SS  
Sbjct: 103 VMSNSGMEVWC--DELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR--RGGRIILTSSIA 158

Query: 123 GKLK 126
             + 
Sbjct: 159 AVMT 162

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 7/92 (7%)

Query: 37  VIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTN 92
           ++  ++D  D   +  +V    +  G+LDI+    G            T E     +  N
Sbjct: 75  IVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQ--AWDDITPEDFRDVMDIN 132

Query: 93  YYGNKRMCEALIP-LLQLSDSPRIVNASSSMG 123
             G      A  P +++      I+  SS+ G
Sbjct: 133 VTGTWNTVMAGAPRIIEGGRGGSIILISSAAG 164

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 9/112 (8%)

Query: 16  TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP- 71
             D        E  K+   + + F   DVT    +  +V    S FGK+D L    G   
Sbjct: 39  HSDTTAMETMKETYKDVE-ERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYV 97

Query: 72  --DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
                 K++    +   + IQ N      + + ++P+++  +  RI+N    
Sbjct: 98  FERK--KLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQ 147

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 10/94 (10%)

Query: 37  VIFHLLDVTDPASVDSLVHFVSSQFGKLDIL------GGLPDNWYKMLTQTYELAEKCIQ 90
           ++   +DV D  ++ + V     Q G+LDI+      G   D   K   + +    + I 
Sbjct: 78  IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDW---TEMID 134

Query: 91  TNYYGNKRMCEALIP-LLQLSDSPRIVNASSSMG 123
            N  G  +  +A +P ++       I+  SS  G
Sbjct: 135 INLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG 168

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 47.1 bits (113), Expect = 3e-07
 Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 8/109 (7%)

Query: 17  KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPD 72
             E    + +E++K  G +  I    DVT  + V +LV     +FGKLD++    G    
Sbjct: 40  SKEDEANSVLEEIKKVGGE-AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENP 98

Query: 73  NWYKMLTQTYELAEKCIQTNYYGNKRMC-EALIPLLQLSDSPRIVNASS 120
                   +     K I TN  G      EA+   ++      ++N SS
Sbjct: 99  V--SSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 9/93 (9%)

Query: 37  VIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN-WYKMLTQTYELAEKCIQT 91
            +  +LDV D A++  LV     QFG+LD++    G L     +++  + ++     I  
Sbjct: 79  ALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTV---IGV 135

Query: 92  NYYGNKRMCEALIP-LLQLSDSPRIVNASSSMG 123
           N  G  R   A +P +++  +   IV  SSS G
Sbjct: 136 NLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG 168

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 22/113 (19%), Positives = 37/113 (32%), Gaps = 21/113 (18%)

Query: 22  GLAAVEKLKNSGCDNVIF-------HLLDVTDPASVDSLVHFVSSQFGKLDIL----GGL 70
           G A  E+L+      VI          +D+T+  S+  +      Q GK+D +    G  
Sbjct: 16  GSAVKERLEKKA--EVITAGRHSGDVTVDITNIDSIKKMY----EQVGKVDAIVSATGSA 69

Query: 71  PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
             +   +   T E     I +   G   +    I    L+D       +  M 
Sbjct: 70  TFS--PLTELTPEKNAVTISSKLGGQINLVLLGIDS--LNDKGSFTLTTGIMM 118

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 14/114 (12%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GG 69
           AT++D +     VEK    G        +DV D A+V   +    ++FGKLD++    G 
Sbjct: 54  ATSRDLEEAGLEVEKT---G-RKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGI 109

Query: 70  LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
            P     +  Q +         ++ G      A +P   L+    I+   S  G
Sbjct: 110 CPLGA-HLPVQAF---ADAFDVDFVGVINTVHAALP--YLTSGASIITTGSVAG 157

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 46.3 bits (111), Expect = 5e-07
 Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 9/93 (9%)

Query: 42  LDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN-WYKMLTQTYELAEKCIQTNYYGN 96
            D++DP SV +L   + +  G +DIL      +P   W  +     +   K I  N  G 
Sbjct: 59  ADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDV---DLDHWRKIIDVNLTGT 115

Query: 97  KRMCEALIPL-LQLSDSPRIVNASSSMGKLKNI 128
             +  A          + R+++ +S+       
Sbjct: 116 FIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP 148

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 46.4 bits (111), Expect = 5e-07
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 10/94 (10%)

Query: 37  VIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN--WYKMLTQTYELAEKCIQ 90
           +I   +DV D  ++ + V    +Q G+LDI+        +     +M  +T+      I 
Sbjct: 91  IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM---ID 147

Query: 91  TNYYGNKRMCEALIP-LLQLSDSPRIVNASSSMG 123
            N  G        IP ++       IV  SS  G
Sbjct: 148 VNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGG 181

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 45.9 bits (110), Expect = 7e-07
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 24/126 (19%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G-- 68
             ++ ++     E+ +  G   V     ++ +  +  +LVH  +   G LD L    G  
Sbjct: 32  YGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGIT 91

Query: 69  --GL-----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
              L      ++W           E  ++ N     R     + L+  +   RIVN +S 
Sbjct: 92  RDTLLVRMKDEDW-----------EAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSV 140

Query: 122 MGKLKN 127
           +G L N
Sbjct: 141 VGILGN 146

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 46.1 bits (110), Expect = 7e-07
 Identities = 15/112 (13%), Positives = 35/112 (31%), Gaps = 9/112 (8%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
                 A  E++ +   + V     DV DP  V + V  +    G  +I+     G   N
Sbjct: 59  KMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAG---N 115

Query: 74  WYKMLTQ-TYELAEKCIQTNYYGNKRMCEALIP-LLQLSDSPRIVNASSSMG 123
           +     + +    +        G   +   +   L++       ++ ++   
Sbjct: 116 FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA 167

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 46.0 bits (110), Expect = 7e-07
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 16/123 (13%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKL-KNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLD 65
           V Y +    T D+   LA    L + +G    I   +DV D A+++S V       G +D
Sbjct: 49  VGYPLA---TADD---LAETVALVEKTGR-RCISAKVDVKDRAALESFVAEAEDTLGGID 101

Query: 66  IL----GGLPDN-WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
           I     G        ++ +  ++     I TN  G      A+ P +   +  RIV  SS
Sbjct: 102 IAITNAGISTIALLPEVESAQWDEV---IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSS 158

Query: 121 SMG 123
            +G
Sbjct: 159 MLG 161

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 46.0 bits (110), Expect = 7e-07
 Identities = 21/116 (18%), Positives = 35/116 (30%), Gaps = 7/116 (6%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
                +   EK+          +  DV++   V   +  + +  G +  L    G     
Sbjct: 47  SAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVK 106

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALI-PLLQLSDSPRIVNASSSMGKLKNI 128
                  T+E        N +G    C A+    LQ      IV  SS   ++ N 
Sbjct: 107 --PATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQ 160

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 45.7 bits (109), Expect = 8e-07
 Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 15/123 (12%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           V+Y+         K     V ++K  G D +     D+     +  L     + FG LDI
Sbjct: 47  VNYA------NSTKDAEKVVSEIKALGSDAIAIKA-DIRQVPEIVKLFDQAVAHFGHLDI 99

Query: 67  L----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
                G +      +   T E  ++    N  G   +       L   +  RIV  SS+ 
Sbjct: 100 AVSNSGVVSFG--HLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLT--EGGRIVLTSSNT 155

Query: 123 GKL 125
            K 
Sbjct: 156 SKD 158

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 17/124 (13%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKL-KNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLD 65
           + Y+ G   + +E   L    +L +  G   +I    DV D AS+ ++V    ++FG +D
Sbjct: 85  LDYAQG---SPEE---LKETVRLVEEQGRR-IIARQADVRDLASLQAVVDEALAEFGHID 137

Query: 66  IL----GGLPDN-WYKMLTQTYELAEKCIQTNYYGNKRMCEALIP-LLQLSDSPRIVNAS 119
           IL    G         +  Q +      +QTN  G    C A++P +++      ++  S
Sbjct: 138 ILVSNVGISNQGEVVSLTDQQWSDI---LQTNLIGAWHACRAVLPSMIERGQGGSVIFVS 194

Query: 120 SSMG 123
           S++G
Sbjct: 195 STVG 198

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 32/146 (21%)

Query: 11  MGEATTK--------------DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHF 56
           +G AT +                  G A  +KL     +N +F   DVT    V + +  
Sbjct: 24  LGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----NNCVFAPADVTSEKDVQTALAL 79

Query: 57  VSSQFGKLDIL----GGLPD----NWYKMLTQTYELAEKCIQTNYYGNKRMC----EALI 104
              +FG++D+     G        N  K  T T E  ++ +  N  G   +       + 
Sbjct: 80  AKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMG 139

Query: 105 PLLQLSDSPR--IVNASSSMGKLKNI 128
                    R  I+N +S       +
Sbjct: 140 QNEPDQGGQRGVIINTASVAAFEGQV 165

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 12/123 (9%), Positives = 34/123 (27%), Gaps = 28/123 (22%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---------GGL- 70
                 ++L+        +  L          L+  V+S +G++D+L             
Sbjct: 33  ESFKQKDELEAFA---ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPI 89

Query: 71  ----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK 126
                +++              ++        +  A+   ++   S  I+  +S+     
Sbjct: 90  DKYAVEDY-----------RGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP 138

Query: 127 NIT 129
              
Sbjct: 139 WKE 141

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 23/93 (24%), Positives = 35/93 (37%), Gaps = 25/93 (26%)

Query: 42  LDVTDPASVDSLVHFVSSQFG-KLDIL----G----GL-----PDNWYKMLTQTYELAEK 87
           LDVT   +VD +   V+   G K+DIL    G     L        W           + 
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRW-----------DA 314

Query: 88  CIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
            I  N    +R+ E L+    + +  R++  SS
Sbjct: 315 VIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSS 347

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 25/126 (19%)

Query: 16  TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G--- 68
           +       A  E+ K +G  NV+    DV +P  V+++V      FG++DIL    G   
Sbjct: 37  SPASTSLDATAEEFKAAG-INVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITR 95

Query: 69  -GL-----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
             L       +W           +  + TN        +A+  ++    S +I+N +S  
Sbjct: 96  DTLMLKMSEKDW-----------DDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIA 144

Query: 123 GKLKNI 128
           G + N 
Sbjct: 145 GIIGNA 150

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 22/145 (15%), Positives = 45/145 (31%), Gaps = 31/145 (21%)

Query: 11  MGEATTK--------------DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHF 56
           +GEAT +                ++G A  ++L   G +   F   +VT   SV + +  
Sbjct: 42  LGEATVRRLHADGLGVVIADLAAEKGKALADEL---G-NRAEFVSTNVTSEDSVLAAIEA 97

Query: 57  VSSQFGKLDIL-----GGLPDNWYKMLTQTYELA--EKCIQTN----YYGNKRMCEALIP 105
            +        +      G+     +      ++    K I       Y   + +  ++  
Sbjct: 98  ANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAA 157

Query: 106 LLQLSDSPR--IVNASSSMGKLKNI 128
                +  R  +V  +S  G    I
Sbjct: 158 AEPRENGERGALVLTASIAGYEGQI 182

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 13/96 (13%), Positives = 26/96 (27%), Gaps = 26/96 (27%)

Query: 42  LDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN---------WYKMLTQTYELAEKC 88
            D+      +  V  +      +D L        D          W+             
Sbjct: 55  SDIVKEVLEEGGVDKL-KNLDHVDTLVHAAAVARDTTIEAGSVAEWHAH----------- 102

Query: 89  IQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
           +  N      +   L+P L+ + S  ++  +S  G 
Sbjct: 103 LDLNVIVPAELSRQLLPALR-AASGCVIYINSGAGN 137

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 30/146 (20%), Positives = 47/146 (32%), Gaps = 34/146 (23%)

Query: 11  MGEATTK--------------DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHF 56
           +G A T+                  G     +L       V F   DVT+ A   + + F
Sbjct: 19  LGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG----AAVRFRNADVTNEADATAALAF 74

Query: 57  VSSQFGKLDIL----GGLPDNWYKMLTQT----YELAEKCIQTNYYGNKRMC----EALI 104
              +FG +  L    G  P    K+L ++     +   + +  N  G   M     E + 
Sbjct: 75  AKQEFGHVHGLVNCAGTAPGE--KILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMS 132

Query: 105 PLLQLSDSPR--IVNASSSMGKLKNI 128
                +D  R  IVN +S       I
Sbjct: 133 QGEPDADGERGVIVNTASIAAFDGQI 158

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 20/118 (16%)

Query: 22  GLAAVEKLKNSGCDNVIF-----------HLLDVTDPASVDSLVHFVSSQFGKLDIL--- 67
           G A  + L   G +  I            H   V D   +   +  +  +  ++DIL   
Sbjct: 32  GRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCD---LRKDLDLLFEKVKEVDILVLN 88

Query: 68  -GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
            GG           T E  ++ I + +    ++    +P ++     RIV  +S    
Sbjct: 89  AGGPKAG--FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVI 144

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 20/143 (13%), Positives = 39/143 (27%), Gaps = 41/143 (28%)

Query: 12  GEATTKD-EKRG----LAA--VEKLK--------NSGCDNVIFHLLDVTDPASVDSLVHF 56
           G A  +   ++G      A  V  ++              +I +  D+++   + S+   
Sbjct: 45  GAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA 104

Query: 57  VSSQFGKLDIL-------------GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEAL 103
           + SQ   +DI               G    W  M              N           
Sbjct: 105 IRSQHSGVDICINNAGLARPDTLLSGSTSGWKDM-----------FNVNVLALSICTREA 153

Query: 104 IPLLQLSDSPR--IVNASSSMGK 124
              ++  +     I+N +S  G 
Sbjct: 154 YQSMKERNVDDGHIININSMSGH 176

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 44.1 bits (105), Expect = 4e-06
 Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 21/97 (21%)

Query: 37  VIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---------GGLPDNWYKMLTQTYELAEK 87
           ++    DV D  S+ + +     + G+LDI+             D W+ +          
Sbjct: 76  IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDV---------- 125

Query: 88  CIQTNYYGNKRMCEALIPLLQLSDSP-RIVNASSSMG 123
            I  N  G     +  IP L    +   IV  SSS G
Sbjct: 126 -IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG 161

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 19/115 (16%), Positives = 35/115 (30%), Gaps = 10/115 (8%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           +      A ++L  +    ++    DVTD  ++ +           + IL    G    +
Sbjct: 44  EAAALDRAAQELGAAVAARIVA---DVTDAEAMTAAAAEA-EAVAPVSILVNSAGIARLH 99

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
               L        + +  N  G      A    +    +  IVN  S  G + N 
Sbjct: 100 --DALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNR 152

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 43.6 bits (104), Expect = 4e-06
 Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 25/126 (19%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G-- 68
             +  K      ++++  G   + F   DV+  A V++++      +G +D++    G  
Sbjct: 32  YARSAKAAEEVSKQIEAYGGQAITFGG-DVSKEADVEAMMKTAIDAWGTIDVVVNNAGIT 90

Query: 69  --GL-----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
              L        W           ++ I  N  G     +A   ++      RI+N +S 
Sbjct: 91  RDTLLIRMKKSQW-----------DEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASV 139

Query: 122 MGKLKN 127
           +G + N
Sbjct: 140 VGLIGN 145

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 43.6 bits (104), Expect = 4e-06
 Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 25/140 (17%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
                  +V+ L   G D       DVTD  ++++    + ++   +DIL    G+    
Sbjct: 42  RATLLAESVDTLTRKGYD-AHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGI-QYR 99

Query: 75  YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP-RIVNASSSMGKL-------- 125
             M+    E  +K I TN      +  +    +   +S  +I+N  S   +         
Sbjct: 100 KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPY 159

Query: 126 -----------KNITNEWAK 134
                       ++  EWA+
Sbjct: 160 TAAKGGIKMLTCSMAAEWAQ 179

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 43.2 bits (103), Expect = 5e-06
 Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 25/126 (19%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G-- 68
              +E++    V+++K  G  + I    DV +   V ++V      FG++DIL    G  
Sbjct: 35  YAGNEQKANEVVDEIKKLG-SDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVT 93

Query: 69  --GL-----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
              L      + W           +  I TN  G     +A+   +      RIVN +S 
Sbjct: 94  KDNLLMRMKEEEW-----------DTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASV 142

Query: 122 MGKLKN 127
           +G   N
Sbjct: 143 VGVTGN 148

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 13/127 (10%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66
           V+Y+       + +   A V  +  SG + V     DV + A + ++   V  QFG+LD 
Sbjct: 55  VNYA------ANREAADAVVAAITESGGEAVAIPG-DVGNAADIAAMFSAVDRQFGRLDG 107

Query: 67  L---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP---RIVNASS 120
           L    G+ D   ++   + E  E+ ++ N  G+       +  +    S     IVN SS
Sbjct: 108 LVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSS 167

Query: 121 SMGKLKN 127
               L +
Sbjct: 168 MAAILGS 174

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 43.4 bits (103), Expect = 6e-06
 Identities = 15/122 (12%), Positives = 39/122 (31%), Gaps = 24/122 (19%)

Query: 22  GLAAVEKLKNSGCDNVIFHL-------------LDVTDPASVDSLVHFVSS--QFGKLDI 66
           G A +E  K +G   +   L              +        S++   +S  Q  ++D 
Sbjct: 16  GSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG 75

Query: 67  L----GGLPDNWYKMLTQTY-ELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
           +    GG         ++ + + A+  I+ + + +    +     L+      +    ++
Sbjct: 76  VFCVAGGWA--GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLK--PGGLLQLTGAA 131

Query: 122 MG 123
             
Sbjct: 132 AA 133

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 26/141 (18%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           + +    A +KL        +    DV++   V  L+  V  +FGKLD +    G    +
Sbjct: 54  NLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH 113

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVN-ASSSMGKL------- 125
                    +   + I+ N +G   +C     LL+ SD+P I+N  S ++ ++       
Sbjct: 114 --PAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISA 171

Query: 126 ------------KNITNEWAK 134
                       K +  EW +
Sbjct: 172 YAASKGGVASLTKALAKEWGR 192

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 43.5 bits (103), Expect = 6e-06
 Identities = 19/112 (16%), Positives = 29/112 (25%), Gaps = 12/112 (10%)

Query: 24  AAVEKLKNSGCD-NVIFHLLDVTDPASVDSLV----HFVSSQFGKLDIL----GGLPDNW 74
              E+L     D  V+    D+   A V  L+         +  +  +L      L D  
Sbjct: 48  QLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVS 107

Query: 75  YKMLTQT-YELAEKCIQTNYYGNKRMCEALIPLLQLSDSP--RIVNASSSMG 123
              L              N      +    +   Q S      +VN SS   
Sbjct: 108 KGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA 159

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 5/81 (6%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRM 99
           D++D      +V     Q G L+IL            +   T E  EK  + N +    +
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHV 164

Query: 100 CEALIPLLQLSDSPRIVNASS 120
            +A +  L+  D   I+N +S
Sbjct: 165 TKAALSHLKQGDV--IINTAS 183

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 25/126 (19%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G-- 68
                      V  +  +G +       DV+  + V++L   V  ++G+LD+L    G  
Sbjct: 59  YASSAGAADEVVAAIAAAGGEAFAVKA-DVSQESEVEALFAAVIERWGRLDVLVNNAGIT 117

Query: 69  --GL-----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
              L      D+W           +  +  N  G      A   ++    S RI+N +S 
Sbjct: 118 RDTLLLRMKRDDW-----------QSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASV 166

Query: 122 MGKLKN 127
           +G++ N
Sbjct: 167 VGEMGN 172

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 43.2 bits (103), Expect = 7e-06
 Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 25/126 (19%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G-- 68
               +++  A VE++K  G D+      +V D   V +++  V SQFG LD+L    G  
Sbjct: 35  YAGSKEKAEAVVEEIKAKGVDSFAIQA-NVADADEVKAMIKEVVSQFGSLDVLVNNAGIT 93

Query: 69  --GL-----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
              L        W           +  I TN  G     +   P +    S  I+N SS 
Sbjct: 94  RDNLLMRMKEQEW-----------DDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSV 142

Query: 122 MGKLKN 127
           +G + N
Sbjct: 143 VGAVGN 148

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 43.3 bits (103), Expect = 7e-06
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 14/111 (12%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           +E     A E +           ++DV DPASV+       +  G+LD +    G   DN
Sbjct: 38  EEGPLREAAEAVGAHP------VVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDN 91

Query: 74  -WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
             +KM     E  E  ++ N  G+  + +A    ++  +   IV  +S + 
Sbjct: 92  FHWKM---PLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY 139

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 25/122 (20%)

Query: 19  EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G----GL 70
           E          K +G       +L+V D  +VD+LV     +FG L++L    G     L
Sbjct: 62  EAGAEGIGAAFKQAG-LEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQL 120

Query: 71  -----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
                 D W           +  I TN     R+  A++  +  +   RIVN +S +G  
Sbjct: 121 AMRMKDDEW-----------DAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA 169

Query: 126 KN 127
            N
Sbjct: 170 GN 171

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 5/81 (6%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRM 99
           D++D +   SLVH      G LDIL    G      ++   T E  ++    N +    +
Sbjct: 108 DLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWI 167

Query: 100 CEALIPLLQLSDSPRIVNASS 120
            +  IPLL    S  I+  SS
Sbjct: 168 TQEAIPLLPKGAS--IITTSS 186

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 43.0 bits (102), Expect = 8e-06
 Identities = 20/143 (13%), Positives = 39/143 (27%), Gaps = 28/143 (19%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASV----DSLVHFVSSQFG 62
           VHY         E      V +L  +   + +    D++  +S+    + ++      FG
Sbjct: 40  VHYR------HSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFG 93

Query: 63  KLDIL-------------GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQL 109
           + D+L              G   N             +   +N      +  A       
Sbjct: 94  RCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGE 153

Query: 110 SDSP-----RIVNASSSMGKLKN 127
             +       +VN   +M  L  
Sbjct: 154 GGAWRSRNLSVVNLCDAMTDLPL 176

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 42.9 bits (102), Expect = 9e-06
 Identities = 23/127 (18%), Positives = 51/127 (40%), Gaps = 25/127 (19%)

Query: 15  TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G-- 68
            ++ +K   + V+++K+ G      +  DV+    +  +++ + ++   +DIL    G  
Sbjct: 74  ISRTQKSCDSVVDEIKSFG-YESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGIT 132

Query: 69  --GL-----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
              L      D W           E  ++TN      + + +   +  +   RI+N SS 
Sbjct: 133 RDNLFLRMKNDEW-----------EDVLRTNLNSLFYITQPISKRMINNRYGRIINISSI 181

Query: 122 MGKLKNI 128
           +G   N+
Sbjct: 182 VGLTGNV 188

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 24/110 (21%)

Query: 24  AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G----GL----- 70
           A  E++ N          +++    S++     + +    +DIL    G     L     
Sbjct: 46  AVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMS 105

Query: 71  PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
             +W           E+ ++ N  G   + +  +  +      RIVN SS
Sbjct: 106 LLDW-----------EEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISS 144

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 25/122 (20%)

Query: 19  EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G----GL 70
           +         +K  G       +L+++D  S+ +    + ++   +DIL    G     L
Sbjct: 39  QASAEKFENSMKEKG-FKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNL 97

Query: 71  -----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
                 D W           +  I TN     RM +  +  +      RI++  S +G  
Sbjct: 98  MMRMSEDEW-----------QSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA 146

Query: 126 KN 127
            N
Sbjct: 147 GN 148

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 21/131 (16%), Positives = 50/131 (38%), Gaps = 21/131 (16%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF----- 61
           +HY         ++     V +++++G         ++     V++L   + ++      
Sbjct: 36  IHYG------NRKEEAEETVYEIQSNGGSAFSIGA-NLESLHGVEALYSSLDNELQNRTG 88

Query: 62  -GKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIV 116
             K DIL    G  P     +   T +  ++ +  N      + +  +  L+  D+ RI+
Sbjct: 89  STKFDILINNAGIGPGA--FIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR--DNSRII 144

Query: 117 NASSSMGKLKN 127
           N SS+  ++  
Sbjct: 145 NISSAATRISL 155

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 25/116 (21%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G----G 69
           +  R +  +E  K  G D       +V D  S       V ++ G++D+L    G     
Sbjct: 47  NSPRRVKWLEDQKALGFDFYASEG-NVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDV 105

Query: 70  L-----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
           +      ++W           +  I TN      + + +I  +      RI+N SS
Sbjct: 106 VFRKMTREDW-----------QAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISS 150

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 19/143 (13%), Positives = 42/143 (29%), Gaps = 28/143 (19%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTD----PASVDSLVHFVSSQFG 62
           +HY          +  ++  ++L     +  +    D+T+    PAS + +++     FG
Sbjct: 52  IHYH------NSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFG 105

Query: 63  KLDIL------------GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS 110
           + D+L                               + I TN      +  +     + +
Sbjct: 106 RCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGT 165

Query: 111 DSP------RIVNASSSMGKLKN 127
           +         IVN   +M     
Sbjct: 166 NPNCTSSNLSIVNLCDAMVDQPC 188

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 15/134 (11%), Positives = 40/134 (29%), Gaps = 27/134 (20%)

Query: 24  AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLT 79
              +++ + G       + D+ D     ++   + +   ++D+L    G +         
Sbjct: 69  EVADEIADGGGS-AEAVVADLADLEGAANVAEEL-AATRRVDVLVNNAGIIARA--PAEE 124

Query: 80  QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL-------------- 125
            +     + +  N      +  +    +    S RIV  +S +                 
Sbjct: 125 VSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHA 184

Query: 126 -----KNITNEWAK 134
                + + +EWA 
Sbjct: 185 VVGLTRALASEWAG 198

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 24/117 (20%)

Query: 24  AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G----GL----- 70
             ++++      +V     +++D  S+  L      +   +DIL    G    GL     
Sbjct: 62  DKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQ 121

Query: 71  PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
             +W           +  +  N      +   LI  +      RI+N +S +G + N
Sbjct: 122 DQDW-----------DDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN 167

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 26/132 (19%), Positives = 41/132 (31%), Gaps = 38/132 (28%)

Query: 22  GLAAVEKLKNSGCDNVIFH-------------LLDVTDPASVDSLVHFVSSQFGKLDIL- 67
           GLA  ++L   G   V                 +DVTD  +VD     V    G +++L 
Sbjct: 28  GLAIAQRLAADGH-KVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV 86

Query: 68  ---G----GL-----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRI 115
              G            + +           EK I  N  G  R+ +     +Q +   R+
Sbjct: 87  SNAGLSADAFLMRMTEEKF-----------EKVINANLTGAFRVAQRASRSMQRNKFGRM 135

Query: 116 VNASSSMGKLKN 127
           +   S  G    
Sbjct: 136 IFIGSVSGLWGI 147

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 41.0 bits (97), Expect = 4e-05
 Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 38/132 (28%)

Query: 22  GLAAVEKLKNSGCDNVIFH-------------LLDVTDPASVDSLVHFVSSQFGKLDIL- 67
           GLA      ++G   V                  D+TD   V+     +    G +++L 
Sbjct: 34  GLAIARAFADAGD-KVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLI 92

Query: 68  ---G----GL-----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRI 115
              G     L      +++              ++TN  G  R+ +     +  +   R+
Sbjct: 93  ANAGVTKDQLLMRMSEEDF-----------TSVVETNLTGTFRVVKRANRAMLRAKKGRV 141

Query: 116 VNASSSMGKLKN 127
           V  SS +G L +
Sbjct: 142 VLISSVVGLLGS 153

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 41.0 bits (97), Expect = 4e-05
 Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 25/118 (21%)

Query: 16  TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G--- 68
           ++        +   +++G D   + + DV D  S +     V + FGK+D+L    G   
Sbjct: 57  SERNDHVSTWLMHERDAGRDFKAYAV-DVADFESCERCAEKVLADFGKVDVLINNAGITR 115

Query: 69  -GL-----PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
                     +W           +  ++T+      + +  I  +      RIVN  S
Sbjct: 116 DATFMKMTKGDW-----------DAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGS 162

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 39.9 bits (94), Expect = 8e-05
 Identities = 26/132 (19%), Positives = 42/132 (31%), Gaps = 28/132 (21%)

Query: 22  GLAAVEKLKNSGC-----------DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--- 67
           G AA   LK  G            +++I+   DVT    V   V     +   L  +   
Sbjct: 15  GRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARA-QEEAPLFAVVSA 73

Query: 68  -GGLPDNWYKMLTQ----TYELAEKCIQTNYYGN----KRMCEALIPLLQLSDSPR--IV 116
            G       K+L +      E   + ++ N  G     +    A+      ++  R  IV
Sbjct: 74  AGVGLAE--KILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIV 131

Query: 117 NASSSMGKLKNI 128
           N +S       I
Sbjct: 132 NTASVAAFEGQI 143

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 39.8 bits (94), Expect = 8e-05
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 14/123 (11%)

Query: 18  DEKRGLAAVEKLKNSGCD------NVIFHLLDVTDPASVDSLVHFVSSQFGK-LDIL--- 67
           D       V  L   G        N      DV++  +   L+  V + F +   ++   
Sbjct: 40  DRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSC 99

Query: 68  -GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALI-PLLQLSDSPRIVNASSSMGKL 125
            G   D +  +L  + +  +K I  N  G   + +A    L+       I+N SS +GK+
Sbjct: 100 AGITQDEF--LLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV 157

Query: 126 KNI 128
            N+
Sbjct: 158 GNV 160

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 10/122 (8%), Positives = 31/122 (25%), Gaps = 24/122 (19%)

Query: 22  GLAAVEKLKNSGCDNVIFHL-------------LDVTDPASVDSLVHFVSS--QFGKLDI 66
           G   V+  +          +             +  +     D +   V       K+D 
Sbjct: 20  GSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA 79

Query: 67  L----GGLPDNWYKMLTQ-TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
           +    GG         ++  ++  +   + + + +          L+  +   +  A + 
Sbjct: 80  ILCVAGGWA--GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLK--EGGLLTLAGAK 135

Query: 122 MG 123
             
Sbjct: 136 AA 137

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 27/140 (19%), Positives = 47/140 (33%), Gaps = 36/140 (25%)

Query: 22  GLAAVEKLKNSGC-----------------DNVIFHLLDVTDPASVDSLVHFVSSQFGKL 64
           GLA  ++L ++G                  D   F   DVTD A+V S +       G L
Sbjct: 22  GLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLA-ETMGTL 80

Query: 65  DIL----GGLPDNWYKMLTQ----TYELAEKCIQTNYYGN--------KRMCEALIPLLQ 108
            I+    G       ++L++    +     K +  N  G+        +R+ +       
Sbjct: 81  RIVVNCAGTGNAI--RVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPN 138

Query: 109 LSDSPRIVNASSSMGKLKNI 128
             +   I+N +S       I
Sbjct: 139 AEERGVIINTASVAAFDGQI 158

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 24/117 (20%)

Query: 24  AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G----GL----- 70
           +  + + +   DN     L+VT+P S+++++  ++ +FG +DIL    G     L     
Sbjct: 44  SGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMK 103

Query: 71  PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
            + W              ++TN     R+ +A++  +      RI+N  S +G + N
Sbjct: 104 EEEW-----------SDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN 149

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 13/111 (11%), Positives = 29/111 (26%), Gaps = 28/111 (25%)

Query: 27  EKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL------GGL-------PDN 73
             + N   +NV +   D+     V+ L   +         +      G         P+ 
Sbjct: 39  STVTNCLSNNVGYRARDLASHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPEQ 95

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
              +           I+ N      +   L+   +      +V   S+  +
Sbjct: 96  IQTL-----------IENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQ 134

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 38.5 bits (90), Expect = 3e-04
 Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 14/92 (15%)

Query: 43  DVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN-WYKMLTQTYELAEKCIQTNYYGNK 97
           +V D      L+      FG LD+L    G + D         + E  +  I  +  G+ 
Sbjct: 94  NVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANT---SEEEFDAVIAVHLKGHF 150

Query: 98  RMCEALIPLLQLSDSP------RIVNASSSMG 123
                     +           RI+N SS  G
Sbjct: 151 ATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG 182

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 29/118 (24%), Positives = 42/118 (35%), Gaps = 26/118 (22%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----G--GLP 71
           D ++G AA   +       V    LD+ D +SV              D+L    G   +P
Sbjct: 49  DTRKGEAAARTMAG----QVEVRELDLQDLSSVRRFA----DGVSGADVLINNAGIMAVP 100

Query: 72  DNWYKMLT-QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
                 LT   +E     I TN+ G+  +   L+P L      R+V  SS       I
Sbjct: 101 ----YALTVDGFES---QIGTNHLGHFALTNLLLPRLT----DRVVTVSSMAHWPGRI 147

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 37.8 bits (88), Expect = 6e-04
 Identities = 17/160 (10%), Positives = 37/160 (23%), Gaps = 45/160 (28%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPAS----------------- 49
           +HY       +      A    L     ++ I    D+++ A+                 
Sbjct: 75  LHYH------RSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTR 128

Query: 50  VDSLVHFVSSQFGKLDIL----GGLPDN------------WYKMLTQTYELAEKCIQTNY 93
              LV    + +G+ D+L                                       +N 
Sbjct: 129 CAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNA 188

Query: 94  YGNKRMCEALIPLLQLSDSP------RIVNASSSMGKLKN 127
                + +A    +  + +        I+N   +M     
Sbjct: 189 IAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 228

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 37.3 bits (87), Expect = 6e-04
 Identities = 17/160 (10%), Positives = 37/160 (23%), Gaps = 45/160 (28%)

Query: 7   VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPAS----------------- 49
           +HY       +      A    L     ++ I    D+++ A+                 
Sbjct: 38  LHYH------RSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTR 91

Query: 50  VDSLVHFVSSQFGKLDIL----GGLPDN------------WYKMLTQTYELAEKCIQTNY 93
              LV    + +G+ D+L                                       +N 
Sbjct: 92  CAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNA 151

Query: 94  YGNKRMCEALIPLLQLSDSP------RIVNASSSMGKLKN 127
                + +A    +  + +        I+N   +M     
Sbjct: 152 IAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 191

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 37.5 bits (88), Expect = 7e-04
 Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 26 VEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
          V +L  +   ++ I    DVT+ A +++    +  Q G +  +
Sbjct: 49 VHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVIHGI 91

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 37.1 bits (87), Expect = 8e-04
 Identities = 21/138 (15%), Positives = 41/138 (29%), Gaps = 31/138 (22%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYK 76
           R  A ++ L       +    +D+ D  + +  +       G +D+L             
Sbjct: 39  RTQADLDSLVREC-PGIEPVCVDLGDWEATERAL----GSVGPVDLLVNNAAVALLQ--P 91

Query: 77  MLTQTYELAEKCIQTNYYGNKRMCEALIP-LLQLSDSPRIVNASSSMGK----------- 124
            L  T E  ++  + N     ++ + +   L+       IVN SS   +           
Sbjct: 92  FLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCS 151

Query: 125 ----LKNIT----NEWAK 134
               L  +T     E   
Sbjct: 152 TKGALDMLTKVMALELGP 169

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 37.2 bits (87), Expect = 9e-04
 Identities = 8/43 (18%), Positives = 15/43 (34%), Gaps = 1/43 (2%)

Query: 26  VEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
           +EKL           + +DV     V +    +    G +D +
Sbjct: 74  LEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGV 116

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	147
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.97
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.96
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.94
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.94
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.92
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.92
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.92
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.92
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.92
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.92
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.92
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.92
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.92
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.92
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.92
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.91
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.91
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.91
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.91
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.91
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.91
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.91
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.91
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.91
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.91
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.91
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.91
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.91
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.91
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.91
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.91
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.91
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.91
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.91
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.9
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.9
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.9
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.9
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.9
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.9
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.9
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.9
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.9
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.9
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.9
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.9
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.9
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.9
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.9
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.9
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.9
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.9
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.9
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.9
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.9
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.9
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.9
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.9
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.9
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.9
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.9
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.9
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.9
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.89
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.89
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.89
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.89
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.89
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.89
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.89
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.89
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.89
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.89
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.89
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.89
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.89
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.89
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.88
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.88
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.88
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.88
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.88
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.88
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.88
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.88
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.88
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.88
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.88
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.88
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.88
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.88
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.88
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.88
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.88
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.88
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.88
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.88
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.88
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.88
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.87
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.87
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.87
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.87
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.87
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.87
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.87
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.87
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.87
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.87
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.87
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.87
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.87
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.87
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.87
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.87
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.87
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.87
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.87
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.87
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.87
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.86
1spx_A	278	Short-chain reductase family member (5L265); paral	99.86
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.86
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.86
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.86
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.86
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.86
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.86
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.86
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.86
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.85
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.85
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.85
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.85
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.85
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.85
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.85
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.85
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.85
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.85
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.85
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.85
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.85
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.85
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.84
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.84
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.84
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.84
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.84
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.84
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.84
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.84
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.84
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.84
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.84
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.84
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.84
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.84
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.83
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.83
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.83
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.83
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.83
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.83
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.83
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.83
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.83
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.83
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.83
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.83
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.82
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.82
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.82
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.82
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.82
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.82
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.82
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.82
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.81
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.81
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.81
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.81
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.8
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.8
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.8
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.8
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.8
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.79
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.79
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.79
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.79
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.78
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.78
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.78
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.77
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.77
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.77
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.77
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.76
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.75
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.75
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.75
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.74
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.74
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.74
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.74
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.73
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.72
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.71
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.7
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.69
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.69
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.69
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.69
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.65
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.63
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.63
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.61
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.59
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.57
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.54
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.5
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.5
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.29
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.27
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.12
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.07
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	98.99
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	98.97
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.95
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	98.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.92
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	98.92
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	98.91
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	98.91
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	98.9
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	98.89
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	98.88
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	98.87
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	98.85
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	98.81
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	98.81
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	98.81
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.8
1xq6_A	253	Unknown protein; structural genomics, protein stru	98.77
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	98.77
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	98.75
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	98.71
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	98.71
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	98.69
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	98.65
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	98.64
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	98.64
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	98.64
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	98.62
4f6c_A	427	AUSA reductase domain protein; thioester reductase	98.61
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	98.61
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	98.57
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	98.57
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	98.55
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	98.55
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	98.53
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	98.52
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	98.51
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	98.5
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	98.44
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	98.41
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	98.4
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	98.38
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	98.38
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	98.38
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	98.34
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	98.33
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	98.33
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	98.33
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	98.31
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	98.3
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	98.3
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.28
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	98.28
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	98.27
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	98.24
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	98.22
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	98.2
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	98.16
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	98.16
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	98.14
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.11
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	98.08
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	98.02
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	98.02
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	98.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	97.98
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	97.97
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.91
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	97.83
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	97.79
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	97.77
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	97.75
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	97.72
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.66
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	97.61
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.6
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	97.4
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.26
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.98
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	96.96
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	96.93
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.78
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.68
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.67
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.66
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.61
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.46
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.17
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	95.92
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	94.81
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	94.14
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	94.06
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	93.43
2l82_A	162	Designed protein OR32; structural genomics, northe	92.73
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	92.18
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	92.04
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	91.96
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	91.55
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	91.27
4g65_A	461	TRK system potassium uptake protein TRKA; structur	91.26
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	89.88
1id1_A	153	Putative potassium channel protein; RCK domain, E.	89.07
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	89.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	88.39
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	87.74
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	87.06
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	84.81
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	84.6
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	83.75
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	80.24

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.97  E-value=4.7e-31  Score=180.81  Aligned_cols=142  Identities=21%  Similarity=0.224  Sum_probs=127.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.++++..+. ++..+.||++|+++++++++++.++||++|++   ||+.....++.
T Consensus        24 A~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~  102 (254)
T 4fn4_A           24 AKKFALNDSIVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVA  102 (254)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGG
T ss_pred             HHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChh
Confidence            577899999999999999999999999998886 69999999999999999999999999999999   88765567889


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++++++|+.|+|+++|.++|+|+++++|+|||+||.++..+.+..      ++++..|++  +|+.|
T Consensus       103 ~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaal~~ltr--~lA~e  174 (254)
T 4fn4_A          103 EVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTR--SIAAH  174 (254)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHHHHHHHH--HHHHH
Confidence            9999999999999999999999999999999889999999999998886654      345666776  56555

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.96  E-value=3.1e-29  Score=171.89  Aligned_cols=141  Identities=16%  Similarity=0.082  Sum_probs=124.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++..+.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        26 a~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~-~~~~~~  103 (255)
T 4g81_D           26 AEGLAAAGARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQ-YRKPMV  103 (255)
T ss_dssp             HHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCC-CCCChh
Confidence            578999999999999999999999999998876 69999999999999999999999999999999   8876 458899


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhcc-CCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQL-SDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++++++|+.|+|+++|.++|+|.+ +++|+|||+||.++..+.+..      +++...+++  +|++|
T Consensus       104 ~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr--~lA~e  176 (255)
T 4g81_D          104 ELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTC--SMAAE  176 (255)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            9999999999999999999999999999965 456999999999998876654      355666666  56555

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.94  E-value=3.7e-27  Score=162.99  Aligned_cols=137  Identities=18%  Similarity=0.129  Sum_probs=119.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. ++..+.||++|+++++++++++.++||++|+|   ||.. ...++.
T Consensus        46 A~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~-~~~~~~  120 (273)
T 4fgs_A           46 AKRFVAEGARVFITGRRKDVLDAAIAEI---GG-GAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGG-SMLPLG  120 (273)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHH---CT-TCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCC-CCCCTT
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHc---CC-CeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            5789999999999999999988887776   43 58899999999999999999999999999999   8876 558899


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhccC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e~  147 (147)
                      +++.++|++.+++|+.|+|+++|.++|+|++.  |+|||+||.++..+.+..      ++++..|++  +|+.|+
T Consensus       121 ~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr--~lA~El  191 (273)
T 4fgs_A          121 EVTEEQYDDTFDRNVKGVLFTVQKALPLLARG--SSVVLTGSTAGSTGTPAFSVYAASKAALRSFAR--NWILDL  191 (273)
T ss_dssp             SCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHH--HHHHHT
T ss_pred             hccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--CeEEEEeehhhccCCCCchHHHHHHHHHHHHHH--HHHHHh
Confidence            99999999999999999999999999999764  899999999998876654      356666766  666654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.94  E-value=4.9e-27  Score=160.32  Aligned_cols=136  Identities=15%  Similarity=0.087  Sum_probs=116.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+    .+. ++..+.||++|+++++++++++.+++|++|+|   ||.. ...++.
T Consensus        19 a~~la~~Ga~V~~~~~~~~~~~~~~~----~~~-~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~-~~~~~~   92 (247)
T 3ged_A           19 CLDFLEAGDKVCFIDIDEKRSADFAK----ERP-NLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRG-SKGILS   92 (247)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHT----TCT-TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCGGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHH----hcC-CEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcc
Confidence            67899999999999999876655433    343 58899999999999999999999999999999   7876 458899


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++++++|+.++++++|.++|+|.+++ |+|||+||..+..+.+..      ++++..|++  +|++|
T Consensus        93 ~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk--~lA~e  163 (247)
T 3ged_A           93 SLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIVALTH--ALAMS  163 (247)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHHHHHH--HHHHH
Confidence            999999999999999999999999999998764 999999999998876654      356667777  66655

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.92  E-value=1.2e-25  Score=154.51  Aligned_cols=138  Identities=17%  Similarity=0.168  Sum_probs=114.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+..+ ..+++...+. ++.++.||++|+++++++++++.++||++|++   ||+... .+ .
T Consensus        24 a~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~-~~-~   99 (258)
T 4gkb_A           24 SMRLAEERAIPVVFARHAPDGA-FLDALAQRQP-RATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDG-IG-L   99 (258)
T ss_dssp             HHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCT-TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-CC-T
T ss_pred             HHHHHHcCCEEEEEECCcccHH-HHHHHHhcCC-CEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC-CC-c
Confidence            5678999999999999877644 4556666665 68999999999999999999999999999999   887532 33 4


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.++++++|.++|+|+++ +|+|||+||.++..+.+..      ++++..|++  +++.|
T Consensus       100 ~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr--~lA~e  170 (258)
T 4gkb_A          100 DAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASKGAQLALTR--EWAVA  170 (258)
T ss_dssp             TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            78899999999999999999999999999765 4999999999988776554      456667776  56555

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.92  E-value=6e-25  Score=151.82  Aligned_cols=141  Identities=22%  Similarity=0.258  Sum_probs=123.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        21 a~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~-~~~~~~   98 (264)
T 3tfo_A           21 ARELGVAGAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVM-PLSPLA   98 (264)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcc
Confidence            577899999999999999999999999988775 68999999999999999999999999999999   7876 447788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|.|++++.|+|||+||..+..+.++.      +++...|+.  +|++|
T Consensus        99 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~e  170 (264)
T 3tfo_A           99 AVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISD--GLRQE  170 (264)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHHHHH--HHHHh
Confidence            9999999999999999999999999999998888999999999988776543      345566665  55554

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.92  E-value=8.8e-25  Score=152.34  Aligned_cols=142  Identities=18%  Similarity=0.145  Sum_probs=122.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||......++.
T Consensus        45 a~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~  123 (283)
T 3v8b_A           45 ALALAADGVTVGALGRTRTEVEEVADEIVGAGG-QAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPID  123 (283)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchh
Confidence            577899999999999999999999999987765 68999999999999999999999999999999   78764557888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC--cCCC------chhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL--KNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~--~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|+|++++.|+||++||.++..  +.++      ++++...++.  ++++|
T Consensus       124 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  197 (283)
T 3v8b_A          124 DLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQ--QLALE  197 (283)
T ss_dssp             TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            99999999999999999999999999999988889999999998876  4333      2345556665  55554

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.92  E-value=1.3e-24  Score=149.17  Aligned_cols=143  Identities=17%  Similarity=0.198  Sum_probs=122.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecC--CCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDV--TDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~--~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+..++.++.+|+  +|+++++++++++.+++|++|++   ||......+
T Consensus        29 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~  108 (252)
T 3f1l_A           29 AMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP  108 (252)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSC
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCC
Confidence            5778999999999999999999988888766543588999999  99999999999999999999999   787545567


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++++++.++|+|++++.|+|||+||..+..+.++.      +++...++.  ++++|
T Consensus       109 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~--~la~e  182 (252)
T 3f1l_A          109 MSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQ--VLADE  182 (252)
T ss_dssp             TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            888999999999999999999999999999998888999999999988776543      345556665  56555

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.92  E-value=1.2e-24  Score=150.32  Aligned_cols=142  Identities=16%  Similarity=0.087  Sum_probs=122.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHh-cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKN-SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++.. .+..++.++.||++|+++++++++++.+.+|++|++   ||.. ...++
T Consensus        25 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~  103 (265)
T 3lf2_A           25 VELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQG-RVSTF  103 (265)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEECCCCC-CCBCT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence            577899999999999999999999998877 444348899999999999999999999999999999   7776 45778


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|+|.+++.|+||++||..+..+.+..      +++...++.  +|++|
T Consensus       104 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  176 (265)
T 3lf2_A          104 AETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVR--SMAFE  176 (265)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHHHHHHHHH--HHHHH
Confidence            88999999999999999999999999999998888999999999988876554      345555665  55554

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.92  E-value=1.1e-24  Score=150.33  Aligned_cols=142  Identities=22%  Similarity=0.109  Sum_probs=121.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+..++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        27 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~  105 (262)
T 3pk0_A           27 ATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVF-PDAPLA  105 (262)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCC-CCCCTT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChh
Confidence            577899999999999999999999999987764468999999999999999999999999999999   7776 347788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC-CcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK-LKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+. .+.++.      +++...++.  ++++|
T Consensus       106 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~l~~--~la~e  178 (262)
T 3pk0_A          106 TMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMR--TAAIE  178 (262)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999998888999999999886 554433      345566665  55544

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.92  E-value=1e-24  Score=150.04  Aligned_cols=140  Identities=19%  Similarity=0.159  Sum_probs=120.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.... .++ 
T Consensus        29 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~-~~~-  105 (256)
T 3gaf_A           29 AGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGP-KPF-  105 (256)
T ss_dssp             HHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-CCT-
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CCC-
Confidence            577899999999999999999999999987775 69999999999999999999999999999999   776633 555 


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|+|++++.|+|||+||..+..+.++.      +++...|+.  ++++|
T Consensus       106 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  177 (256)
T 3gaf_A          106 DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTR--NIAFD  177 (256)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            7899999999999999999999999999998888999999999988776543      345555665  55544

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.92  E-value=8.8e-25  Score=150.04  Aligned_cols=140  Identities=10%  Similarity=0.100  Sum_probs=122.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.||++|+++++++++++.+. |++|++   ||... ..++.
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~-~~~~~  100 (252)
T 3h7a_A           24 AKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNEDEVTAFLNAADAH-APLEVTIFNVGANV-NFPIL  100 (252)
T ss_dssp             HHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHH-SCEEEEEECCCCCC-CCCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCCHHHHHHHHHHHHhh-CCceEEEECCCcCC-CCCcc
Confidence            577899999999999999999999999988775 7999999999999999999999999 999999   78763 47788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|.|++++.|+||++||.++..+.++.      +++...|+.  +|++|
T Consensus       101 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  172 (252)
T 3h7a_A          101 ETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQ--SMARE  172 (252)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999998878999999999988776543      345556665  55554

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.92  E-value=2.6e-24  Score=148.16  Aligned_cols=141  Identities=14%  Similarity=0.089  Sum_probs=121.9

Q ss_pred             ccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|+++ +|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++
T Consensus        21 a~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~   98 (258)
T 3oid_A           21 AIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASG-VLRPV   98 (258)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCSCG
T ss_pred             HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCh
Confidence            57889999999987 8998889999899887765 69999999999999999999999999999999   7765 44778


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|+|++++.|+|||+||..+..+.++.      +++...|+.  ++++|
T Consensus        99 ~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  171 (258)
T 3oid_A           99 MELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTR--YLAVE  171 (258)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHHHHHH--HHHHH
Confidence            88999999999999999999999999999999888999999999988775543      345566666  56555

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.92  E-value=1.8e-25  Score=152.21  Aligned_cols=134  Identities=14%  Similarity=0.076  Sum_probs=111.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+..  +++.++++..+. ++..+.||++|+++++.+++     +|++|++   ||+. ...++.
T Consensus        26 A~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~~~-----~g~iDiLVNNAGi~-~~~~~~   96 (247)
T 4hp8_A           26 AVGLAAAGAEVVCAARRAP--DETLDIIAKDGG-NASALLIDFADPLAAKDSFT-----DAGFDILVNNAGII-RRADSV   96 (247)
T ss_dssp             HHHHHHTTCEEEEEESSCC--HHHHHHHHHTTC-CEEEEECCTTSTTTTTTSST-----TTCCCEEEECCCCC-CCCCGG
T ss_pred             HHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCC-cEEEEEccCCCHHHHHHHHH-----hCCCCEEEECCCCC-CCCCcc
Confidence            5789999999999999864  456677777776 69999999999998877653     4899999   8877 457888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++++++|+.|+|+++|.++|+|.++ ++|+|||+||..+..+.+..      |+++..|++  +|+.|
T Consensus        97 ~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr--~lA~E  169 (247)
T 4hp8_A           97 EFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTK--LLANE  169 (247)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHH--HHHHH
Confidence            99999999999999999999999999999765 46999999999998876554      456666666  56555

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.92  E-value=1.6e-24  Score=149.67  Aligned_cols=141  Identities=18%  Similarity=0.193  Sum_probs=122.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||......++.
T Consensus        28 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~  106 (264)
T 3ucx_A           28 ARRCAEQGADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFA  106 (264)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGG
T ss_pred             HHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCch
Confidence            577899999999999999999999999988775 69999999999999999999999999999999   77654557888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+++ |+||++||..+..+.++.      +++...|+.  ++++|
T Consensus       107 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  177 (264)
T 3ucx_A          107 NTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQ--TLATE  177 (264)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHHHHHHHH--HHHHH
Confidence            999999999999999999999999999998765 999999999988776543      345556666  55554

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.91  E-value=1.2e-24  Score=151.05  Aligned_cols=141  Identities=14%  Similarity=0.079  Sum_probs=119.6

Q ss_pred             ccccccCCcEEEEeecChhh-------HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC
Q 040927            2 KRSNQVHYSMGEATTKDEKR-------GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP   71 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~   71 (147)
                      ++.|+++|++|++++|+.+.       ++++.+++...+. ++.++.||++|+++++++++++.+++|++|++   ||..
T Consensus        23 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~  101 (274)
T 3e03_A           23 ALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG-QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI  101 (274)
T ss_dssp             HHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTS-EEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcc
Confidence            57889999999999998653       6667777777665 69999999999999999999999999999999   7776


Q ss_pred             CcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc--------CCCchhhhccccchhhh
Q 040927           72 DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK--------NITNEWAKGVLSDWMRC  143 (147)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--------~~~~~~~~~~~~~~~al  143 (147)
                       ...++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+..+        |..++++...|+.  ++
T Consensus       102 -~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaal~~l~~--~l  178 (274)
T 3e03_A          102 -WLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTL--GL  178 (274)
T ss_dssp             -CCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHH--HH
T ss_pred             -cCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCchHHHHHHHHHHHHH--HH
Confidence             346778899999999999999999999999999999988899999999998776        3334556666666  55


Q ss_pred             hcc
Q 040927          144 RRS  146 (147)
Q Consensus       144 ~~e  146 (147)
                      ++|
T Consensus       179 a~e  181 (274)
T 3e03_A          179 AAE  181 (274)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.91  E-value=1.8e-24  Score=150.83  Aligned_cols=141  Identities=14%  Similarity=0.147  Sum_probs=120.4

Q ss_pred             ccccccCCcEEEEeecChh-------hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC
Q 040927            2 KRSNQVHYSMGEATTKDEK-------RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP   71 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~   71 (147)
                      ++.|+++|++|++++|+.+       .++++.+++...+. ++.++.||++|+++++++++++.+++|++|++   ||..
T Consensus        26 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~  104 (285)
T 3sc4_A           26 AKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAI  104 (285)
T ss_dssp             HHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            5788999999999999876       46777788877765 69999999999999999999999999999999   7776


Q ss_pred             CcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC-CC------chhhhccccchhhhh
Q 040927           72 DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN-IT------NEWAKGVLSDWMRCR  144 (147)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-~~------~~~~~~~~~~~~al~  144 (147)
                       ...++.+.+.++|++++++|+.+++++++.++|.|++++.|+|||+||..+..+. ++      ++++...|+.  +|+
T Consensus       105 -~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~--~la  181 (285)
T 3sc4_A          105 -NLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCAL--GIA  181 (285)
T ss_dssp             -CCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHHHHHHHHHHHHHH--HHH
T ss_pred             -CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchHHHHHHHHHHHHH--HHH
Confidence             4467888999999999999999999999999999999888999999999887764 22      2345666666  666


Q ss_pred             cc
Q 040927          145 RS  146 (147)
Q Consensus       145 ~e  146 (147)
                      +|
T Consensus       182 ~e  183 (285)
T 3sc4_A          182 EE  183 (285)
T ss_dssp             HH
T ss_pred             HH
Confidence            55

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.91  E-value=1.2e-24  Score=150.81  Aligned_cols=142  Identities=18%  Similarity=0.102  Sum_probs=122.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++
T Consensus        42 ia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~  119 (271)
T 4ibo_A           42 MAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQ-FRKPM  119 (271)
T ss_dssp             HHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCC-CCCCG
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC-CCCCc
Confidence            3578899999999999999999999999988775 68999999999999999999999999999999   7876 34778


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.+++.|+|||+||..+..+.++.      +.+...|+.  +|++|
T Consensus       120 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  192 (271)
T 4ibo_A          120 IELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTR--AMAAE  192 (271)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            88999999999999999999999999999998878999999999988776543      344555555  55544

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.91  E-value=1.9e-24  Score=150.43  Aligned_cols=142  Identities=15%  Similarity=0.049  Sum_probs=122.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||......++.
T Consensus        25 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~  103 (280)
T 3tox_A           25 ALLFAREGAKVVVTARNGNALAELTDEIAGGGG-EAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEIS  103 (280)
T ss_dssp             HHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTC-CEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChh
Confidence            577899999999999999999999999877665 68999999999999999999999999999999   78664557788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC-CcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK-LKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|.|.+++.|+||++||..+. .+.++.      +++...|+.  +|++|
T Consensus       104 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  176 (280)
T 3tox_A          104 SLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQ--ALAVE  176 (280)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            9999999999999999999999999999999888999999999887 444332      345556666  55554

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.91  E-value=3.2e-24  Score=147.58  Aligned_cols=141  Identities=10%  Similarity=0.027  Sum_probs=120.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        23 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~  100 (257)
T 3imf_A           23 ATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG-QILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGN-FICPAE  100 (257)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTT-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            577899999999999999999999999877665 68999999999999999999999999999999   7766 447788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhh-ccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLL-QLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|+| .+...|+|||+||..+..+.++.      +++...|+.  +|++|
T Consensus       101 ~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  173 (257)
T 3imf_A          101 DLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTK--TLAVE  173 (257)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHH--HHHHH
Confidence            89999999999999999999999999999 44557999999999988775543      345556665  55544

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.91  E-value=2.5e-24  Score=150.76  Aligned_cols=142  Identities=21%  Similarity=0.160  Sum_probs=121.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+..++.++.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        58 a~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~  136 (293)
T 3rih_A           58 ATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIF-PEARLD  136 (293)
T ss_dssp             HHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCTT
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcc
Confidence            578899999999999999999999999987764468999999999999999999999999999999   7776 446788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC-CcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK-LKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|.|++++.|+|||+||..+. .+.++.      +++...|+.  ++++|
T Consensus       137 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  209 (293)
T 3rih_A          137 TMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMR--TAAIE  209 (293)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999998888999999999885 554433      345555665  55544

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.91  E-value=2.5e-24  Score=149.94  Aligned_cols=143  Identities=18%  Similarity=0.133  Sum_probs=121.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...++..+.++.||++|+++++++++++.+++|++|++   ||......++.
T Consensus        50 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~  129 (281)
T 4dry_A           50 AQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLE  129 (281)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcc
Confidence            577899999999999999999999888877655345899999999999999999999999999999   78764446788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|.|.+++  +|+|||+||..+..+.++.      +++...|+.  ++++|
T Consensus       130 ~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  203 (281)
T 4dry_A          130 EVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTK--STALD  203 (281)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHHHHHHHHHH--HHHHH
Confidence            899999999999999999999999999998875  6899999999988776543      345556665  55544

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.91  E-value=4.1e-24  Score=148.71  Aligned_cols=141  Identities=20%  Similarity=0.199  Sum_probs=120.1

Q ss_pred             ccccccCCcEEEEeecC------------hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--
Q 040927            2 KRSNQVHYSMGEATTKD------------EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--   67 (147)
                      ++.|+++|++|++++|+            .+.+++..+++...+. ++.++.+|++|+++++++++++.+++|++|++  
T Consensus        27 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~  105 (281)
T 3s55_A           27 AVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR-RCISAKVDVKDRAALESFVAEAEDTLGGIDIAIT  105 (281)
T ss_dssp             HHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred             HHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            57889999999999997            5667777777777665 69999999999999999999999999999999  


Q ss_pred             -ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccch
Q 040927           68 -GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDW  140 (147)
Q Consensus        68 -ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~  140 (147)
                       ||.. ...++.+.+.++|++.+++|+.+++++++.++|+|.+++.|+|||+||..+..+.++.      +++...|+. 
T Consensus       106 nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~-  183 (281)
T 3s55_A          106 NAGIS-TIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTK-  183 (281)
T ss_dssp             CCCCC-CCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCCCchhHHHHHHHHHHHH-
Confidence             7776 3467788999999999999999999999999999988888999999999988775543      345566666 


Q ss_pred             hhhhcc
Q 040927          141 MRCRRS  146 (147)
Q Consensus       141 ~al~~e  146 (147)
                       +|++|
T Consensus       184 -~la~e  188 (281)
T 3s55_A          184 -CAAHD  188 (281)
T ss_dssp             -HHHHH
T ss_pred             -HHHHH
Confidence             66655

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.91  E-value=9.2e-24  Score=145.61  Aligned_cols=143  Identities=17%  Similarity=0.139  Sum_probs=122.6

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|++++.++++++.+.+|++|++   ||......++
T Consensus        45 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~  123 (262)
T 3rkr_A           45 IARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPL  123 (262)
T ss_dssp             HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCG
T ss_pred             HHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCc
Confidence            3577899999999999999999999999987775 69999999999999999999999999999999   7764355678


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.|++.+++.++|.|.+++.|+||++||..+..+.++..      ++...+..  ++++|
T Consensus       124 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  196 (262)
T 3rkr_A          124 HTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMT--SAAEE  196 (262)
T ss_dssp             GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            889999999999999999999999999999988889999999999988765433      34455555  45443

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.91  E-value=5.3e-24  Score=148.12  Aligned_cols=141  Identities=22%  Similarity=0.170  Sum_probs=121.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        41 a~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~  118 (279)
T 3sju_A           41 ARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRN-GGGETA  118 (279)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCC-CCSCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCC-CCCChh
Confidence            578899999999999999999999999987765 69999999999999999999999999999999   7776 347778


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHH--hhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIP--LLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~--~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|  .|.+++.|+|||+||..+..+.++.      +++...|+.  +|++|
T Consensus       119 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  192 (279)
T 3sju_A          119 DLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTK--SVGFE  192 (279)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHHHHHHHH--HHHHH
Confidence            899999999999999999999999999  6777777999999999988776544      345555665  55555

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.91  E-value=4.5e-24  Score=148.82  Aligned_cols=143  Identities=16%  Similarity=0.058  Sum_probs=120.0

Q ss_pred             CccccccCCcEEEEeecC----------------hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCc
Q 040927            1 MKRSNQVHYSMGEATTKD----------------EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKL   64 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   64 (147)
                      +++.|+++|++|++++|+                .+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++
T Consensus        27 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  105 (286)
T 3uve_A           27 HAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR-RIVTAEVDVRDYDALKAAVDSGVEQLGRL  105 (286)
T ss_dssp             HHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            367889999999999887                6677778888877665 69999999999999999999999999999


Q ss_pred             cEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhh
Q 040927           65 DIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAK  134 (147)
Q Consensus        65 d~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~  134 (147)
                      |++   ||......++.+.+.++|++.+++|+.+++++++.++|+|.+++ +|+|||+||..+..+.+..      +++.
T Consensus       106 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  185 (286)
T 3uve_A          106 DIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGV  185 (286)
T ss_dssp             CEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCCCCccHHHHHHHHH
Confidence            999   78764434588899999999999999999999999999998765 6899999999988876543      3455


Q ss_pred             ccccchhhhhcc
Q 040927          135 GVLSDWMRCRRS  146 (147)
Q Consensus       135 ~~~~~~~al~~e  146 (147)
                      ..|+.  +|++|
T Consensus       186 ~~~~~--~la~e  195 (286)
T 3uve_A          186 VGLMR--AFGVE  195 (286)
T ss_dssp             HHHHH--HHHHH
T ss_pred             HHHHH--HHHHH
Confidence            66666  55554

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.91  E-value=3.1e-24  Score=148.35  Aligned_cols=141  Identities=16%  Similarity=0.140  Sum_probs=120.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHh-cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKN-SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++.. .+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++
T Consensus        37 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~  114 (266)
T 4egf_A           37 ARAFAAAGARLVLSGRDVSELDAARRALGEQFGT-DVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGIS-HPQPV  114 (266)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCh
Confidence            577899999999999999999998888876 344 69999999999999999999999999999999   7776 34678


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.+++ +|+||++||..+..+.++.      +++...|+.  ++++|
T Consensus       115 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~--~la~e  188 (266)
T 4egf_A          115 VDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATK--VLARE  188 (266)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999998765 5899999999988776543      345555665  55554

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.91  E-value=1.7e-24  Score=150.04  Aligned_cols=141  Identities=21%  Similarity=0.206  Sum_probs=121.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++..+.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        45 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~  122 (270)
T 3ftp_A           45 ALELARRGAMVIGTATTEAGAEGIGAAFKQAGL-EGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGIT-QDQLAM  122 (270)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC-CCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcc
Confidence            577899999999999999999999888887775 58899999999999999999999999999999   7776 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.++++|+|||+||..+..+.++.      +++...|+.  +|++|
T Consensus       123 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  194 (270)
T 3ftp_A          123 RMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTR--ALARE  194 (270)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999988888999999998877665443      345556666  55554

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.91  E-value=5.8e-24  Score=146.30  Aligned_cols=141  Identities=10%  Similarity=-0.029  Sum_probs=120.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---ch
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---WY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~~   75 (147)
                      ++.|+++|++|++++|+.+.++++.+++++.++.++.++.||++|+++++++++++.+++|++|++   +|....   ..
T Consensus        25 A~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~  104 (256)
T 4fs3_A           25 AKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRG  104 (256)
T ss_dssp             HHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTS
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEecccccccccccc
Confidence            578899999999999999999999999988776578999999999999999999999999999999   665422   24


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ++.+.+.++|+..+++|+.+++.+++.+.|++.+  +|+|||+||.++..+.+..      ++++..|++  +|+.|
T Consensus       105 ~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr--~lA~E  177 (256)
T 4fs3_A          105 RFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVK--YLALD  177 (256)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccCcccchhhHHHHHHHHHHHH--HHHHH
Confidence            5678899999999999999999999999988764  4899999999998876654      456677777  66665

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.91  E-value=5.9e-24  Score=147.88  Aligned_cols=142  Identities=23%  Similarity=0.218  Sum_probs=120.3

Q ss_pred             CccccccCCcEEEEeec-------------ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            1 MKRSNQVHYSMGEATTK-------------DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      +++.|+++|++|++++|             +.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++
T Consensus        31 ~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l  109 (280)
T 3pgx_A           31 HAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDVRDDAALRELVADGMEQFGRLDVV  109 (280)
T ss_dssp             HHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHCCCCEE
T ss_pred             HHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            35788999999999998             67778888888887765 68999999999999999999999999999999


Q ss_pred             ---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccc
Q 040927           68 ---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVL  137 (147)
Q Consensus        68 ---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~  137 (147)
                         ||.. ...++.+.+.++|++.+++|+.+++++++.++|+|.+++ +|+|||+||..+..+.++.      +++...|
T Consensus       110 vnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  188 (280)
T 3pgx_A          110 VANAGVL-SWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTAL  188 (280)
T ss_dssp             EECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EECCCCC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCCchhHHHHHHHHHHH
Confidence               7776 346788899999999999999999999999999998765 6899999999988876554      3455556


Q ss_pred             cchhhhhcc
Q 040927          138 SDWMRCRRS  146 (147)
Q Consensus       138 ~~~~al~~e  146 (147)
                      +.  +|++|
T Consensus       189 ~~--~la~e  195 (280)
T 3pgx_A          189 TN--TLAIE  195 (280)
T ss_dssp             HH--HHHHH
T ss_pred             HH--HHHHH
Confidence            55  55544

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.91  E-value=4.9e-24  Score=148.44  Aligned_cols=143  Identities=17%  Similarity=0.184  Sum_probs=120.7

Q ss_pred             CccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++| +.+.++++.+++....+.++.++.+|++|+++++++++++.+++|++|++   ||.. ...+
T Consensus        41 ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~  119 (281)
T 3v2h_A           41 IARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQ-FVEK  119 (281)
T ss_dssp             HHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCC-CCCC
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC-CCCC
Confidence            35788999999999999 66778888888877644468999999999999999999999999999999   7776 4467


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.|++++++.++|.|++++.|+||++||..+..+.+..      +++...++.  ++++|
T Consensus       120 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  193 (281)
T 3v2h_A          120 IEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTK--TVALE  193 (281)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            888999999999999999999999999999998888999999999988776544      345555655  55544

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.91  E-value=7.6e-24  Score=148.63  Aligned_cols=142  Identities=18%  Similarity=0.071  Sum_probs=119.6

Q ss_pred             ccccccCCcEEEEeecC------------hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--
Q 040927            2 KRSNQVHYSMGEATTKD------------EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--   67 (147)
                      ++.|+++|++|++++|+            .+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++  
T Consensus        45 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  123 (299)
T 3t7c_A           45 AITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLA  123 (299)
T ss_dssp             HHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             HHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            57789999999999887            6778888888887775 69999999999999999999999999999999  


Q ss_pred             -ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccccc
Q 040927           68 -GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLSD  139 (147)
Q Consensus        68 -ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~~  139 (147)
                       ||......++.+.+.++|++.+++|+.|++++++.++|.|.+++ .|+|||+||.++..+.+..      +++...|+.
T Consensus       124 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~  203 (299)
T 3t7c_A          124 NAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMR  203 (299)
T ss_dssp             CCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCcchHHHHHHHHHHHHH
Confidence             77764444578899999999999999999999999999987764 6899999999988776544      345556666


Q ss_pred             hhhhhcc
Q 040927          140 WMRCRRS  146 (147)
Q Consensus       140 ~~al~~e  146 (147)
                        +|++|
T Consensus       204 --~la~e  208 (299)
T 3t7c_A          204 --TMALE  208 (299)
T ss_dssp             --HHHHH
T ss_pred             --HHHHH
Confidence              55554

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.91  E-value=2.8e-24  Score=150.10  Aligned_cols=143  Identities=18%  Similarity=0.196  Sum_probs=122.2

Q ss_pred             ccccccCCc---EEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYS---MGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~---~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|+++|+   +|++++|+.+.++++.+++.... +.++.++.||++|+++++++++++.+++|++|++   ||.....
T Consensus        50 a~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~  129 (287)
T 3rku_A           50 ALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGS  129 (287)
T ss_dssp             HHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCC
T ss_pred             HHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCC
Confidence            567788888   99999999999999999887652 2368899999999999999999999999999999   7876445


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .++.+.+.++|++.+++|+.|++++++.++|.|++++.|+|||+||.++..+.++.      +++...|+.  +|++|
T Consensus       130 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  205 (287)
T 3rku_A          130 DRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTD--SLRKE  205 (287)
T ss_dssp             CCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            67888999999999999999999999999999998888999999999988776543      345566666  66665

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.91  E-value=7.8e-24  Score=144.88  Aligned_cols=140  Identities=24%  Similarity=0.242  Sum_probs=118.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.+|++|++   ||.. ...++.
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~  101 (247)
T 2jah_A           24 ARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIM-LLGPVE  101 (247)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC-CCCCST
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCchh
Confidence            567889999999999999888888888877664 68999999999999999999999999999999   7766 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+++ |+||++||..+..+.++.      +++...|+.  ++++|
T Consensus       102 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  172 (247)
T 2jah_A          102 DADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSE--TLRQE  172 (247)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHHHHHHH--HHHHH
Confidence            889999999999999999999999999998766 999999999988765543      344455555  55544

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.90  E-value=2.6e-24  Score=148.23  Aligned_cols=132  Identities=13%  Similarity=0.041  Sum_probs=109.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-cchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-NWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-~~~~~   77 (147)
                      ++.|+++|++|++++|+..+          .. .+...+.||++|+++++.+++++.+++|++|++   ||... ...++
T Consensus        28 a~~la~~Ga~V~~~~r~~~~----------~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~   96 (261)
T 4h15_A           28 VSLFLELGAQVLTTARARPE----------GL-PEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGF   96 (261)
T ss_dssp             HHHHHHTTCEEEEEESSCCT----------TS-CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCG
T ss_pred             HHHHHHcCCEEEEEECCchh----------CC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCc
Confidence            56788899999999987542          11 135678899999999999999999999999999   77642 34678


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC-------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT-------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-------~~~~~~~~~~~~al~~e  146 (147)
                      .+++.++|++.+++|+.++++++|.++|+|+++++|+|||+||..+..+.+.       +++++..|++  +|+.|
T Consensus        97 ~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~lt~--~lA~E  170 (261)
T 4h15_A           97 SALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSK--AMSKE  170 (261)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999999988899999999998877543       2355666766  66665

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.90  E-value=5.9e-24  Score=147.92  Aligned_cols=143  Identities=14%  Similarity=0.070  Sum_probs=121.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCC--CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC--DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+.  .++.++.+|++|+++++++++++.+++|++|++   ||......+
T Consensus        28 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~  107 (281)
T 3svt_A           28 AAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGP  107 (281)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCC
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCC
Confidence            577899999999999999999999999887653  258899999999999999999999999999999   776445577


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++++++.++|.|.++++|+|||+||..+..+.++.      +++...++.  ++++|
T Consensus       108 ~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~--~la~e  181 (281)
T 3svt_A          108 ITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQ--LAADE  181 (281)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHHHHHHHHHHHH--HHHHH
Confidence            889999999999999999999999999999998888999999998877665433      345556655  45444

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.90  E-value=1.1e-23  Score=150.37  Aligned_cols=141  Identities=17%  Similarity=0.168  Sum_probs=118.8

Q ss_pred             ccccccCCcEEEEeecChhh-------HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC
Q 040927            2 KRSNQVHYSMGEATTKDEKR-------GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP   71 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~   71 (147)
                      ++.|+++|++|++++|+.+.       +++..+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||..
T Consensus        62 a~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~  140 (346)
T 3kvo_A           62 ALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG-KALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAI  140 (346)
T ss_dssp             HHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            57889999999999998764       5677778877775 69999999999999999999999999999999   7776


Q ss_pred             CcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc--CCC------chhhhccccchhhh
Q 040927           72 DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK--NIT------NEWAKGVLSDWMRC  143 (147)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--~~~------~~~~~~~~~~~~al  143 (147)
                       ...++.+.+.++|++++++|+.+++++++.++|+|++++.|+|||+||..+..+  .++      ++.+...|+.  +|
T Consensus       141 -~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~~Y~aSKaal~~l~~--~l  217 (346)
T 3kvo_A          141 -SLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVL--GM  217 (346)
T ss_dssp             -CCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSHHHHHHHHHHHHHHH--HH
T ss_pred             -CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCchHHHHHHHHHHHHHH--HH
Confidence             446778899999999999999999999999999999988899999999988766  222      2345555555  56


Q ss_pred             hcc
Q 040927          144 RRS  146 (147)
Q Consensus       144 ~~e  146 (147)
                      ++|
T Consensus       218 a~e  220 (346)
T 3kvo_A          218 AEE  220 (346)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            555

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.90  E-value=1.1e-23  Score=144.40  Aligned_cols=143  Identities=19%  Similarity=0.156  Sum_probs=118.2

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC--Ccch
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP--DNWY   75 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~--~~~~   75 (147)
                      +++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   ||..  ....
T Consensus        25 ~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~  103 (253)
T 3qiv_A           25 YAEALAREGAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLD  103 (253)
T ss_dssp             HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGG
T ss_pred             HHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCc
Confidence            3678899999999999999999999999987775 68999999999999999999999999999999   7763  2345


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc---CCCchhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK---NITNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~---~~~~~~~~~~~~~~~al~~e  146 (147)
                      ++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+   |..++.+...|+.  ++++|
T Consensus       104 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~Y~asK~a~~~~~~--~la~e  175 (253)
T 3qiv_A          104 FLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNYYGLAKVGINGLTQ--QLSRE  175 (253)
T ss_dssp             CTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------CCHHHHHHHHH--HHHHH
T ss_pred             ccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCCchhHHHHHHHHHHHH--HHHHH
Confidence            677889999999999999999999999999999888899999999987643   4455667777777  66665

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.90  E-value=1e-23  Score=146.42  Aligned_cols=141  Identities=16%  Similarity=0.046  Sum_probs=119.5

Q ss_pred             ccccccCCcEEEEeec-------------ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE-
Q 040927            2 KRSNQVHYSMGEATTK-------------DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-   67 (147)
                      ++.|+++|++|++++|             +.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++ 
T Consensus        28 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv  106 (277)
T 3tsc_A           28 AVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIV  106 (277)
T ss_dssp             HHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             HHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5788999999999998             66777888888877665 69999999999999999999999999999999 


Q ss_pred             --ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhcccc
Q 040927           68 --GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLS  138 (147)
Q Consensus        68 --ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~  138 (147)
                        ||.. ...++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+|||+||..+..+.+..      +++...|+
T Consensus       107 nnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~  185 (277)
T 3tsc_A          107 ANAGVA-APQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLA  185 (277)
T ss_dssp             ECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHH
T ss_pred             ECCCCC-CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCCchhhHHHHHHHHHHH
Confidence              7876 346788899999999999999999999999999998765 6899999999988776543      34556666


Q ss_pred             chhhhhcc
Q 040927          139 DWMRCRRS  146 (147)
Q Consensus       139 ~~~al~~e  146 (147)
                      .  +|++|
T Consensus       186 ~--~la~e  191 (277)
T 3tsc_A          186 R--AFAAE  191 (277)
T ss_dssp             H--HHHHH
T ss_pred             H--HHHHH
Confidence            6  55554

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.90  E-value=1.4e-23  Score=145.50  Aligned_cols=139  Identities=17%  Similarity=0.139  Sum_probs=118.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++.   . ++.++.+|++|+++++++++++.+++|++|++   ||......++.
T Consensus        45 a~~la~~G~~V~~~~r~~~~~~~~~~~~~---~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~  120 (272)
T 4dyv_A           45 AVALAGAGYGVALAGRRLDALQETAAEIG---D-DALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPME  120 (272)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHT---S-CCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHhC---C-CeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChh
Confidence            57889999999999999988888877773   3 58899999999999999999999999999999   78764546788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|.|.+++  +|+|||+||..+..+.++.      +++...|+.  ++++|
T Consensus       121 ~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  194 (272)
T 4dyv_A          121 DLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTK--STSLD  194 (272)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            899999999999999999999999999998775  6899999999998876544      345556665  55544

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.90  E-value=3.2e-24  Score=149.02  Aligned_cols=142  Identities=16%  Similarity=0.156  Sum_probs=120.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+++..+++....+.++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        44 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~  122 (277)
T 4fc7_A           44 AEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGN-FLCPAG  122 (277)
T ss_dssp             HHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCC-CCCCcc
Confidence            577899999999999999888888888865433368999999999999999999999999999999   7765 346778


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+++.|+|||+||..+..+.+..      +++...|+.  ++++|
T Consensus       123 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  194 (277)
T 4fc7_A          123 ALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTR--HLAVE  194 (277)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999988777999999999887665443      455566666  55544

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.90  E-value=1.9e-23  Score=144.19  Aligned_cols=142  Identities=20%  Similarity=0.175  Sum_probs=121.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+..++.++.+|++|+++++++++++.++++++|++   ||.. ...++.
T Consensus        40 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~  118 (266)
T 3o38_A           40 ARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG-GQTPVV  118 (266)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcC-CCCCcc
Confidence            577899999999999999999999999977665579999999999999999999999999999999   7766 347788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++.+++.++|+|.++ +.++||++||..+..+.++.      +.+...|+.  +|++|
T Consensus       119 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e  191 (266)
T 3o38_A          119 DMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTR--CSAIE  191 (266)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            89999999999999999999999999999876 56889999999988776543      345555555  55544

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1.3e-23  Score=145.97  Aligned_cols=138  Identities=22%  Similarity=0.180  Sum_probs=118.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        46 a~~la~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~  120 (277)
T 3gvc_A           46 ARRLADEGCHVLCADIDGDAADAAATKI---GC-GAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVV-HLASLI  120 (277)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHHH---CS-SCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCC-CCBCTT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC-cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            5778999999999999998888877776   33 58899999999999999999999999999999   7776 446778


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.++++|+||++||..+..+.++..      ++...++.  ++++|
T Consensus       121 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  192 (277)
T 3gvc_A          121 DTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSR--ITAAE  192 (277)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            89999999999999999999999999999988889999999999888765543      45555555  55544

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.90  E-value=5.7e-24  Score=147.76  Aligned_cols=141  Identities=18%  Similarity=0.172  Sum_probs=119.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        49 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~  126 (276)
T 3r1i_A           49 ALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIV-SVQAML  126 (276)
T ss_dssp             HHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcc
Confidence            577899999999999999999999999988775 68999999999999999999999999999999   7776 346778


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCC--------Cchhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNI--------TNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~--------~~~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+++ +|+||++||..+..+..        .++++...|+.  ++++|
T Consensus       127 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  201 (276)
T 3r1i_A          127 DMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTK--AMAVE  201 (276)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHHHHHHHHHH--HHHHH
Confidence            899999999999999999999999999998765 38999999988875432        22345556665  55544

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.90  E-value=2.4e-23  Score=142.19  Aligned_cols=143  Identities=20%  Similarity=0.205  Sum_probs=121.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecC--CCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDV--TDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~--~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+..+..++.+|+  +|+++++++++++.+.+|++|++   ||......+
T Consensus        31 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~  110 (247)
T 3i1j_A           31 ARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTP  110 (247)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSC
T ss_pred             HHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCC
Confidence            5778999999999999999999999999877644577777777  99999999999999999999999   777545577


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.++.      +++...|+.  +|++|
T Consensus       111 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  184 (247)
T 3i1j_A          111 LEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQ--TLADE  184 (247)
T ss_dssp             GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence            889999999999999999999999999999998888999999999988776543      345555655  55544

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.90  E-value=6.6e-24  Score=146.94  Aligned_cols=141  Identities=17%  Similarity=0.160  Sum_probs=119.5

Q ss_pred             ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++| +.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++
T Consensus        45 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~  122 (269)
T 4dmm_A           45 ALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG-EAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGIT-RDTLL  122 (269)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence            5778999999999998 66777888888887765 68999999999999999999999999999999   7776 34677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.|++++++.++|.|.+++.|+||++||.++..+.++.      +++...|+.  +|++|
T Consensus       123 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~--~la~e  195 (269)
T 4dmm_A          123 LRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTK--TVAKE  195 (269)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            88999999999999999999999999999998888999999998877665443      345555665  55554

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.90  E-value=1.9e-23  Score=144.34  Aligned_cols=142  Identities=16%  Similarity=0.113  Sum_probs=118.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhc--CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNS--GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+.+.++++.+++...  +. ++.++.+|++|+++++++++++.+++|++|++   ||......+
T Consensus        30 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~  108 (267)
T 1iy8_A           30 AVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDA-EVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNP  108 (267)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTC-CEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBC
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCc-eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCC
Confidence            5678899999999999998888888888664  43 68899999999999999999999999999999   776533266


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.++.      +++...++.  ++++|
T Consensus       109 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  182 (267)
T 1iy8_A          109 TESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTR--NSAVE  182 (267)
T ss_dssp             GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHHHHHHHHHH--HHHHH
Confidence            778899999999999999999999999999988777999999999888765543      344555555  45444

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.90  E-value=1.6e-23  Score=147.17  Aligned_cols=142  Identities=16%  Similarity=0.108  Sum_probs=122.2

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.+|++|++   ||.. ...++
T Consensus        47 la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~  124 (301)
T 3tjr_A           47 TATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIV-VAGPL  124 (301)
T ss_dssp             HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCC-CCBCG
T ss_pred             HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcC-CCCCc
Confidence            3578899999999999999999999999987765 69999999999999999999999999999999   7776 44778


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.|++++++.++|.|.+++ .|+||++||.++..+.++.      +.+...|+.  +|++|
T Consensus       125 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  198 (301)
T 3tjr_A          125 AQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAE--TLARE  198 (301)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999998766 6899999999998876554      344555555  55554

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.90  E-value=8.9e-24  Score=144.86  Aligned_cols=141  Identities=14%  Similarity=0.140  Sum_probs=112.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhc--CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNS--GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+.+.++++.+++...  +..++.++.+|++|+++++++++++.+++|++|++   ||... ..+
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~  102 (250)
T 3nyw_A           24 AAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFM-DGS  102 (250)
T ss_dssp             HHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCCC-CCC
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCC-CCC
Confidence            5778899999999999999999998888765  31368899999999999999999999999999999   77763 345


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      + +.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||.++..+.++.      +++...|+.  +|++|
T Consensus       103 ~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  175 (250)
T 3nyw_A          103 L-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAE--SLYRE  175 (250)
T ss_dssp             C-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHHHHHHHHH--HHHHH
T ss_pred             C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence            5 7788999999999999999999999999998888999999999988754432      344555555  55544

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.90  E-value=5.9e-24  Score=145.56  Aligned_cols=138  Identities=20%  Similarity=0.219  Sum_probs=117.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++..    +...+.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        26 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~  100 (248)
T 3op4_A           26 AELLAERGAKVIGTATSESGAQAISDYLGD----NGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGIT-RDNLLM  100 (248)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            577899999999999999888888777742    46788999999999999999999999999999   7876 346788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|+|.+++.|+|||+||.++..+.++.      +++...|+.  ++++|
T Consensus       101 ~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~--~la~e  172 (248)
T 3op4_A          101 RMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTK--SMARE  172 (248)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999988888999999998877665543      345556666  55554

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.90  E-value=1e-23  Score=144.13  Aligned_cols=141  Identities=21%  Similarity=0.204  Sum_probs=118.0

Q ss_pred             ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++| +.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++
T Consensus        21 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~-~~~~~   98 (246)
T 2uvd_A           21 AIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVT-KDNLL   98 (246)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCG
T ss_pred             HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCh
Confidence            5678899999999999 88888888888877665 68899999999999999999999999999999   7766 34677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++.      +.+...|+.  ++++|
T Consensus        99 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  171 (246)
T 2uvd_A           99 MRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTK--TSAKE  171 (246)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            78999999999999999999999999999988777999999998876654433      344555555  55544

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.90  E-value=6.8e-24  Score=145.06  Aligned_cols=141  Identities=22%  Similarity=0.222  Sum_probs=118.6

Q ss_pred             ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|+++++ +.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++
T Consensus        21 a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~   98 (246)
T 3osu_A           21 ALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGIT-RDNLL   98 (246)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCT
T ss_pred             HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence            5778999999999887 56778888888887765 68999999999999999999999999999999   7776 34677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|+|.+++.|+||++||..+..+.++.      +++...++.  ++++|
T Consensus        99 ~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  171 (246)
T 3osu_A           99 MRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTK--SAARE  171 (246)
T ss_dssp             TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHH--HHHHH
Confidence            88999999999999999999999999999988888999999998877665443      345555655  55544

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.90  E-value=2.6e-23  Score=141.35  Aligned_cols=137  Identities=13%  Similarity=0.069  Sum_probs=113.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++.   . ++.++.+|++|+++++++++++.+.+|++|++   ||.. ...++.
T Consensus        20 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~   94 (235)
T 3l6e_A           20 TIGLVERGHQVSMMGRRYQRLQQQELLLG---N-AVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTG-EFGPVG   94 (235)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHG---G-GEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC-------
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHhc---C-CceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCC-CCCChH
Confidence            57889999999999999998888887773   2 48899999999999999999999999999999   7775 457788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|.|++++ ++||++||..+..+.+..      +++...|+.  +|++|
T Consensus        95 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  165 (235)
T 3l6e_A           95 VYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLE--SLRAE  165 (235)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHH--HHHHH
Confidence            899999999999999999999999999998775 599999999988876544      345566666  56655

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.90  E-value=3e-23  Score=144.18  Aligned_cols=138  Identities=15%  Similarity=0.186  Sum_probs=117.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. ++..+.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        44 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~  118 (277)
T 4dqx_A           44 AELFAKNGAYVVVADVNEDAAVRVANEI---GS-KAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFG-TTGNVV  118 (277)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHHH---CT-TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcc
Confidence            5778999999999999998888777765   33 68899999999999999999999999999999   7766 346778


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|.|++++.|+||++||..+..+.++.      +++...|+.  ++++|
T Consensus       119 ~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  190 (277)
T 4dqx_A          119 TIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTR--AMAMD  190 (277)
T ss_dssp             TSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999998888999999999988776543      345555665  55544

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.90  E-value=2.3e-23  Score=144.29  Aligned_cols=139  Identities=22%  Similarity=0.236  Sum_probs=118.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC-Ccchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP-DNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~-~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.+++..+++   +. ++.++.+|++|+++++++++++.+++|++|++   ||.. ....++
T Consensus        28 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~  103 (271)
T 3tzq_B           28 SRVLARAGARVVLADLPETDLAGAAASV---GR-GAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLV  103 (271)
T ss_dssp             HHHHHHTTCEEEEEECTTSCHHHHHHHH---CT-TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCG
T ss_pred             HHHHHHCCCEEEEEcCCHHHHHHHHHHh---CC-CeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcc
Confidence            5778999999999999998888887776   33 58899999999999999999999999999999   7765 224567


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|+|++++.|+|||+||..+..+.++.      +++...|+.  ++++|
T Consensus       104 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  176 (271)
T 3tzq_B          104 TQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTR--YVATQ  176 (271)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHH--HHHHH
Confidence            78999999999999999999999999999998888999999999988776543      345566666  55554

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.90  E-value=5.5e-23  Score=142.16  Aligned_cols=141  Identities=20%  Similarity=0.267  Sum_probs=117.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHH-HhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKL-KNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++ ...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++
T Consensus        38 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~  115 (267)
T 1vl8_A           38 AQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN-RRHPA  115 (267)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCh
Confidence            5678899999999999998888888777 44454 58889999999999999999999999999999   7766 34677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC-CCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM-GKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~-~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||.. +..+.++.      +++...|..  ++++|
T Consensus       116 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  189 (267)
T 1vl8_A          116 EEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTK--ALAKE  189 (267)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHHHHHHHHHH--HHHHH
Confidence            789999999999999999999999999999988789999999988 77665443      344555555  55444

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.90  E-value=5.4e-23  Score=141.61  Aligned_cols=141  Identities=18%  Similarity=0.173  Sum_probs=119.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc-CCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+++ +++|++   ||.. ...++
T Consensus        26 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~  103 (260)
T 2ae2_A           26 VEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV-IYKEA  103 (260)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCC-CCCCh
Confidence            567889999999999999888888888877664 68899999999999999999999999 899999   7766 34667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++.      +++...++.  ++++|
T Consensus       104 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  176 (260)
T 2ae2_A          104 KDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTR--CLAFE  176 (260)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHHHHHHHH--HHHHH
Confidence            78899999999999999999999999999988877999999999887765443      344555555  55544

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.90  E-value=4.5e-23  Score=141.98  Aligned_cols=142  Identities=16%  Similarity=0.117  Sum_probs=119.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++..+.+|++|+++++++++++.+.+|++|++   ||......++.
T Consensus        31 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~  109 (260)
T 2zat_A           31 ARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL-SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNII  109 (260)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcc
Confidence            567889999999999999888888888877665 58899999999999999999999999999999   77653346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++.      +++...|+.  ++++|
T Consensus       110 ~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  181 (260)
T 2zat_A          110 DATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTK--NLAVE  181 (260)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999988877999999999887765543      344555555  44443

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.90  E-value=7.9e-24  Score=144.87  Aligned_cols=138  Identities=14%  Similarity=0.084  Sum_probs=117.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+++..+++   +. ++.++.+|++|+++++++++++.+.+|++|++   ||.. ...++.
T Consensus        23 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~   97 (247)
T 3rwb_A           23 AARLAADGATVIVSDINAEGAKAAAASI---GK-KARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIV-PFVAWD   97 (247)
T ss_dssp             HHHHHHTTCEEEEECSCHHHHHHHHHHH---CT-TEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-ceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC-CCCCcc
Confidence            5778999999999999998888877776   33 68999999999999999999999999999999   7776 447788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|+|++++ .|+||++||..+..+.++.      +++...|+.  ++++|
T Consensus        98 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  170 (247)
T 3rwb_A           98 DVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTR--ALATE  170 (247)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHHHHH--HHHHH
Confidence            999999999999999999999999999998765 6899999999877665543      345556666  55554

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.90  E-value=3.2e-23  Score=142.60  Aligned_cols=141  Identities=17%  Similarity=0.137  Sum_probs=117.9

Q ss_pred             ccccccCCcEEEEeecChhh--HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKR--GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~--~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+.+.  ++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...+
T Consensus        19 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~   96 (258)
T 3a28_C           19 SEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQ-KAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIA-QIKP   96 (258)
T ss_dssp             HHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCC-CCCC
T ss_pred             HHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCC
Confidence            56788999999999999877  7888888876654 68999999999999999999999999999999   7765 3467


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC-CeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS-PRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++++++.++|.|.+++. |+||++||..+..+.++.      +++...++.  ++++|
T Consensus        97 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  171 (258)
T 3a28_C           97 LLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQ--AAAQE  171 (258)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            778999999999999999999999999999987766 899999999887765443      344555555  45443

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.90  E-value=2.2e-23  Score=144.77  Aligned_cols=140  Identities=13%  Similarity=-0.006  Sum_probs=119.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++..+.+|++|+++++++++++.+. +++|++   ||.. ...++.
T Consensus        50 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~-g~iD~lvnnAg~~-~~~~~~  126 (275)
T 4imr_A           50 AEGLAGAGAHVILHGVKPGSTAAVQQRIIASGG-TAQELAGDLSEAGAGTDLIERAEAI-APVDILVINASAQ-INATLS  126 (275)
T ss_dssp             HHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTC-CEEEEECCTTSTTHHHHHHHHHHHH-SCCCEEEECCCCC-CCBCGG
T ss_pred             HHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHh-CCCCEEEECCCCC-CCCCcc
Confidence            577899999999999999999999899887775 6999999999999999999999887 999999   7766 346788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|.|++++.|+|||+||..+..+.++.      +++...|+.  ++++|
T Consensus       127 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  198 (275)
T 4imr_A          127 ALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQ--SQARD  198 (275)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999988888999999999888765443      345556665  55544

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.90  E-value=3.7e-23  Score=142.13  Aligned_cols=141  Identities=18%  Similarity=0.189  Sum_probs=118.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        19 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~   96 (256)
T 1geg_A           19 ALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVA-PSTPIE   96 (256)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCC-CCBCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChh
Confidence            567889999999999999888888888877664 68899999999999999999999999999999   7765 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..+..+.+..      +++...++.  ++++|
T Consensus        97 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  169 (256)
T 1geg_A           97 SITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQ--TAARD  169 (256)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            889999999999999999999999999998766 6899999999888765543      344455555  45443

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.90  E-value=4e-23  Score=146.04  Aligned_cols=141  Identities=21%  Similarity=0.180  Sum_probs=118.5

Q ss_pred             ccccccCCcEEEEeecC------------hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--
Q 040927            2 KRSNQVHYSMGEATTKD------------EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--   67 (147)
                      ++.|+++|++|++++|+            .+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++  
T Consensus        63 a~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVn  141 (317)
T 3oec_A           63 AVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR-RIIARQADVRDLASLQAVVDEALAEFGHIDILVS  141 (317)
T ss_dssp             HHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             HHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57789999999999876            5677777778877765 69999999999999999999999999999999  


Q ss_pred             -ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccccc
Q 040927           68 -GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLSD  139 (147)
Q Consensus        68 -ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~~  139 (147)
                       ||.. ...++.+.+.++|++.+++|+.+++++++.++|.|.+++ +|+|||+||..+..+.++.      +++...|+.
T Consensus       142 nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~  220 (317)
T 3oec_A          142 NVGIS-NQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLML  220 (317)
T ss_dssp             CCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTTBHHHHHHHHHHHHHHH
T ss_pred             CCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCCCcchHHHHHHHHHHHH
Confidence             7776 346778899999999999999999999999999998764 6899999999988876544      345555665


Q ss_pred             hhhhhcc
Q 040927          140 WMRCRRS  146 (147)
Q Consensus       140 ~~al~~e  146 (147)
                        +|++|
T Consensus       221 --~la~e  225 (317)
T 3oec_A          221 --SLANE  225 (317)
T ss_dssp             --HHHHH
T ss_pred             --HHHHH
Confidence              55554

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.90  E-value=3.2e-23  Score=143.74  Aligned_cols=141  Identities=20%  Similarity=0.138  Sum_probs=119.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc-CCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.+ +++|++   ||.. ...++
T Consensus        38 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~-~~~~~  115 (273)
T 1ae1_A           38 VEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVV-IHKEA  115 (273)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCC-CCCCT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCC-CCCCh
Confidence            567889999999999999888888888877665 68899999999999999999999999 999999   7765 34677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++.      +++...++.  ++++|
T Consensus       116 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  188 (273)
T 1ae1_A          116 KDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTK--SLACE  188 (273)
T ss_dssp             TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence            78899999999999999999999999999988777999999999887765443      344555555  45444

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.89  E-value=8.4e-24  Score=143.67  Aligned_cols=128  Identities=17%  Similarity=0.106  Sum_probs=104.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+++      ..+ .++..+.||++|++++++++    +++|++|++   ||+..   ++.
T Consensus        28 a~~la~~Ga~Vv~~~~~~~~~~~------~~~-~~~~~~~~Dv~~~~~v~~~~----~~~g~iDiLVNNAGi~~---~~~   93 (242)
T 4b79_A           28 AMQFAELGAEVVALGLDADGVHA------PRH-PRIRREELDITDSQRLQRLF----EALPRLDVLVNNAGISR---DRE   93 (242)
T ss_dssp             HHHHHHTTCEEEEEESSTTSTTS------CCC-TTEEEEECCTTCHHHHHHHH----HHCSCCSEEEECCCCCC---GGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHhh------hhc-CCeEEEEecCCCHHHHHHHH----HhcCCCCEEEECCCCCC---Ccc
Confidence            57789999999999999876442      123 36899999999999987776    457999999   88763   456


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++++++|+.|+++++|.++|+|+++ +|+|||+||+.+..+.+..      ++++..|++  +|+.|
T Consensus        94 ~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr--~lA~E  164 (242)
T 4b79_A           94 EYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAIVQLTR--SLACE  164 (242)
T ss_dssp             GGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHH--HHHHH
Confidence            88999999999999999999999999999765 4999999999998876654      356666776  56555

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.89  E-value=2.1e-23  Score=142.53  Aligned_cols=141  Identities=16%  Similarity=0.106  Sum_probs=120.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.++++..+. ++.++.+|++|+++++++++++.++++++|++   ||.. ...++.
T Consensus        22 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~   99 (247)
T 3lyl_A           22 AHALASKGATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGIT-RDNLMM   99 (247)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCchh
Confidence            577899999999999999999999999888775 69999999999999999999999999999999   7776 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++.      +.+...|+.  ++++|
T Consensus       100 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  171 (247)
T 3lyl_A          100 RMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSK--SLAYE  171 (247)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999988888999999999887665543      344555555  55544

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.89  E-value=3.1e-23  Score=145.63  Aligned_cols=125  Identities=54%  Similarity=0.790  Sum_probs=110.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCH-HHHHHHHHHHHhhcCCccEE---ecCCCc----
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP-ASVDSLVHFVSSQFGKLDIL---GGLPDN----   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~l---ag~~~~----   73 (147)
                      ++.|+++|++|++++|+.+.+++..+++...++.++.++.+|++|+ ++++.+++.+.+.++++|++   ||....    
T Consensus        29 a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~  108 (311)
T 3o26_A           29 CKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDA  108 (311)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECH
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCccccccccc
Confidence            5778999999999999999999999999887655799999999998 99999999999999999999   776521    


Q ss_pred             -------------------------chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           74 -------------------------WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        74 -------------------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                                               ..++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||..+..+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~  186 (311)
T 3o26_A          109 DRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLK  186 (311)
T ss_dssp             HHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGG
T ss_pred             chhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccc
Confidence                                     23455678999999999999999999999999999888899999999988654

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.89  E-value=1.9e-23  Score=144.05  Aligned_cols=142  Identities=18%  Similarity=0.119  Sum_probs=118.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.+|++|++   ||......++.
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~  102 (262)
T 1zem_A           24 ALRLAEEGTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQ  102 (262)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccc
Confidence            567889999999999999888888888877665 68899999999999999999999999999999   77652346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+++.|+|||+||..+..+.+..      +++...|+.  ++++|
T Consensus       103 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  174 (262)
T 1zem_A          103 DYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTE--TAALD  174 (262)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999988777899999998877665443      344455555  45443

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.89  E-value=3.5e-23  Score=141.78  Aligned_cols=139  Identities=22%  Similarity=0.191  Sum_probs=116.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++.   . ++.++.+|++|+++++++++++.+.+|++|++   ||......++.
T Consensus        17 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~   92 (248)
T 3asu_A           17 TRRFIQQGHKVIATGRRQERLQELKDELG---D-NLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAH   92 (248)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHC---T-TEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHhc---C-ceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchh
Confidence            56788999999999999988887777763   2 58899999999999999999999999999999   77653345677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|.|.+++.|+|||+||..+..+.++.      +++...|+.  ++++|
T Consensus        93 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  164 (248)
T 3asu_A           93 KASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSL--NLRTD  164 (248)
T ss_dssp             GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999987777999999999988765443      345556665  55554

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.89  E-value=5e-23  Score=142.73  Aligned_cols=141  Identities=23%  Similarity=0.122  Sum_probs=118.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++... . ++.++.+|++|+++++++++.+.+.+|++|++   ||......++.
T Consensus        38 a~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~  115 (272)
T 2nwq_A           38 ARRFAEAGWSLVLTGRREERLQALAGELSAK-T-RVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQ  115 (272)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-S-CEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-C-cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcc
Confidence            5678999999999999998888888887654 2 58899999999999999999999999999999   77653336777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCC-eEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP-RIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+++.| +|||+||..+..+.++.      +++...|+.  ++++|
T Consensus       116 ~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  188 (272)
T 2nwq_A          116 SCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSL--NLRCD  188 (272)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHTT
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            89999999999999999999999999999887778 99999999887765443      345556665  56655

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.89  E-value=3.4e-23  Score=143.19  Aligned_cols=138  Identities=16%  Similarity=0.157  Sum_probs=108.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        44 a~~la~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~  118 (266)
T 3grp_A           44 ARCFHAQGAIVGLHGTREDKLKEIAADL---GK-DVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGIT-RDGLFV  118 (266)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHH---CS-SEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC------C
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-ceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcc
Confidence            5778999999999999998888776655   43 68999999999999999999999999999999   7776 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+++.|+|||+||..+..+.++.      +++...|+.  ++++|
T Consensus       119 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  190 (266)
T 3grp_A          119 RMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSK--ALAQE  190 (266)
T ss_dssp             CCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999988888999999999988776543      344555555  55544

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.89  E-value=2.9e-23  Score=144.44  Aligned_cols=142  Identities=21%  Similarity=0.205  Sum_probs=111.9

Q ss_pred             ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC-Ccchh
Q 040927            2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP-DNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~-~~~~~   76 (147)
                      ++.|+++|++|++++| +.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ....+
T Consensus        46 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~  124 (280)
T 4da9_A           46 ARALAASGFDIAITGIGDAEGVAPVIAELSGLGA-RVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDD  124 (280)
T ss_dssp             HHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTC-CEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC------CC
T ss_pred             HHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCC
Confidence            5778999999999995 77788888888887765 69999999999999999999999999999999   7763 24467


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC---CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD---SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++++++.++|.|.+++   .|+||++||..+..+.++.      +++...++.  ++++|
T Consensus       125 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  201 (280)
T 4da9_A          125 FLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQ--GLALR  201 (280)
T ss_dssp             GGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHHHHHHHHHHHH--HHHHH
Confidence            88899999999999999999999999999998754   6899999999988775543      345556665  55544

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.89  E-value=6.6e-23  Score=141.11  Aligned_cols=138  Identities=20%  Similarity=0.149  Sum_probs=116.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+++..+++   +. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        25 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~   99 (259)
T 4e6p_A           25 AEAYVREGATVAIADIDIERARQAAAEI---GP-AAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALF-DLAPIV   99 (259)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHH---CT-TEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCC-CCBCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-CceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcc
Confidence            5778999999999999998888877776   33 58899999999999999999999999999999   7776 446788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+++ +|+||++||..+..+.++.      +++...++.  ++++|
T Consensus       100 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  172 (259)
T 4e6p_A          100 EITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQ--SAGLD  172 (259)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHHHHH--HHHHH
Confidence            899999999999999999999999999998765 6899999999988776543      345556665  55544

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.89  E-value=4.8e-23  Score=141.84  Aligned_cols=141  Identities=16%  Similarity=0.121  Sum_probs=117.2

Q ss_pred             ccccccCCcEEEEeecChhh-HHHHHHHHHhc-CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKR-GLAAVEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~-~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+.+. ++++.+++... +. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...+
T Consensus        21 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~   98 (260)
T 1x1t_A           21 ATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ-HTAL   98 (260)
T ss_dssp             HHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS-CEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCC-CCCC
T ss_pred             HHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCC-cEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCC
Confidence            56788999999999999877 88888887664 44 58899999999999999999999999999999   7765 3366


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++.      +.+...|+.  ++++|
T Consensus        99 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  172 (260)
T 1x1t_A           99 IEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTK--VTALE  172 (260)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            778899999999999999999999999999988777999999999887765443      344455555  44443

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.89  E-value=6.6e-23  Score=141.35  Aligned_cols=141  Identities=20%  Similarity=0.170  Sum_probs=118.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhc-CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++... +. ++.++.+|++|+++++++++++.+.+|++|++   ||.. ...++
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~  101 (263)
T 3ai3_A           24 AEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTG-SNETI  101 (263)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCC-CCCCT
T ss_pred             HHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence            5678899999999999998888888888665 54 68899999999999999999999999999999   7765 34667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.++.      +++...++.  ++++|
T Consensus       102 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  174 (263)
T 3ai3_A          102 MEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSK--TLATE  174 (263)
T ss_dssp             TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHHHHHHHH--HHHHH
Confidence            78899999999999999999999999999987777999999999887765443      344555555  44443

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.89  E-value=7.5e-23  Score=140.62  Aligned_cols=136  Identities=17%  Similarity=0.068  Sum_probs=115.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. ++.++.+|++|+++++++++++.+.+|++|++   ||.. ...++.
T Consensus        25 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~   99 (255)
T 4eso_A           25 VRRLVEGGAEVLLTGRNESNIARIREEF---GP-RVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVS-ELEPFD   99 (255)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHH---GG-GEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCC-CCBCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-cceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChh
Confidence            5778999999999999998888877776   32 68999999999999999999999999999999   7776 347788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|+|++  +|+|||+||.++..+.++..      ++...|+.  +|++|
T Consensus       100 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  169 (255)
T 4eso_A          100 QVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKAALVSFAS--VLAAE  169 (255)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            9999999999999999999999999999976  38999999999887765543      45556665  56555

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.89  E-value=2.8e-22  Score=138.78  Aligned_cols=139  Identities=17%  Similarity=0.118  Sum_probs=115.5

Q ss_pred             ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|+++++ +.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++
T Consensus        35 a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~  112 (270)
T 3is3_A           35 AVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVV-SFGHL  112 (270)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence            5778999999999876 45667888888887775 69999999999999999999999999999999   7776 44778


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC-CCCcCCC------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM-GKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~-~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|+|.+  +|+||++||.. +..+.++      ++++...|+.  +|++|
T Consensus       113 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  184 (270)
T 3is3_A          113 KDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVR--IFSKD  184 (270)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            89999999999999999999999999999976  48999999988 4444433      2345566666  55554

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.88  E-value=8.4e-23  Score=140.23  Aligned_cols=142  Identities=18%  Similarity=0.080  Sum_probs=119.2

Q ss_pred             CccccccCCcEEEEee-cChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATT-KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++ |+.+..++..+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...+
T Consensus        29 ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~-~~~~  106 (256)
T 3ezl_A           29 ICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGF-DFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGIT-RDVV  106 (256)
T ss_dssp             HHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCC-CCCC
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-eeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCc
Confidence            3678899999999988 667777777888877765 68999999999999999999999999999999   7766 3467


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++..      .+...|+.  ++++|
T Consensus       107 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  180 (256)
T 3ezl_A          107 FRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTM--SLAQE  180 (256)
T ss_dssp             TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHHHHHHHHH--HHHHH
Confidence            7789999999999999999999999999999988889999999999887765543      34455555  55554

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.88  E-value=9.3e-23  Score=141.67  Aligned_cols=141  Identities=19%  Similarity=0.180  Sum_probs=118.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.+|++|++   ||.. ...++.
T Consensus        39 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~  116 (277)
T 2rhc_B           39 ARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRP-GGGATA  116 (277)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCC-CCSCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChh
Confidence            567889999999999999888888888877665 68899999999999999999999999999999   7765 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHh--hccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPL--LQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.  |.+++.|+||++||..+..+.++.      +.+...++.  ++++|
T Consensus       117 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  190 (277)
T 2rhc_B          117 ELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTK--ALGLE  190 (277)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999  887767899999999887765443      344555555  45443

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.88  E-value=9.4e-23  Score=139.63  Aligned_cols=138  Identities=22%  Similarity=0.186  Sum_probs=113.2

Q ss_pred             ccccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+. +.+++   ++...+. ++.++.+|++|+++++++++++.++++++|++   ||.. ...++
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~   98 (249)
T 2ew8_A           24 AERFAVEGADIAIADLVPAPEAEA---AIRNLGR-RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIY-PLIPF   98 (249)
T ss_dssp             HHHHHHTTCEEEEEESSCCHHHHH---HHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEcCCchhHHHH---HHHhcCC-cEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence            567889999999999987 66554   4444454 68899999999999999999999999999999   7766 34677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++.      +.+...|+.  ++++|
T Consensus        99 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  171 (249)
T 2ew8_A           99 DELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTR--ALASD  171 (249)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            78999999999999999999999999999988777999999999887765443      345555555  55544

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.88  E-value=1.6e-22  Score=143.11  Aligned_cols=143  Identities=18%  Similarity=0.163  Sum_probs=120.4

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++|+.+.++++.+++...+. .++.++.+|++|+++++++++.+.+.+|++|++   ||.. ...+
T Consensus        24 la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~  102 (319)
T 3ioy_A           24 LVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVN-LFQP  102 (319)
T ss_dssp             HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCC-CCCC
T ss_pred             HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcC-CCCC
Confidence            3577899999999999999999999888876653 258899999999999999999999999999999   7776 4477


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC------CCCeEEEEcCCCCCCcCCCch------hhhccccchhhhh
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS------DSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCR  144 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~  144 (147)
                      +.+.+.++|++.+++|+.|++++++.++|.|.++      +.|+||++||.++..+.+...      .+...|+.  +|+
T Consensus       103 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y~aSKaal~~~~~--~la  180 (319)
T 3ioy_A          103 IEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSE--SLH  180 (319)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHHHHHHHHHHHHHH--HHH
T ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHHHHHHHHHHHHHH--HHH
Confidence            8889999999999999999999999999999764      568999999999988765543      34444555  555


Q ss_pred             cc
Q 040927          145 RS  146 (147)
Q Consensus       145 ~e  146 (147)
                      .|
T Consensus       181 ~e  182 (319)
T 3ioy_A          181 YS  182 (319)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.88  E-value=1.9e-22  Score=138.49  Aligned_cols=139  Identities=17%  Similarity=0.178  Sum_probs=114.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+  ++..+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        21 a~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~   96 (255)
T 2q2v_A           21 AQVLARAGANIVLNGFGDP--APALAEIARHGV-KAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQ-HVAPVE   96 (255)
T ss_dssp             HHHHHHTTCEEEEECSSCC--HHHHHHHHTTSC-CEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCC-CCBCGG
T ss_pred             HHHHHHCCCEEEEEeCCch--HHHHHHHHhcCC-ceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            5678899999999999876  556666765554 58889999999999999999999999999999   7765 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++.      +++...++.  ++++|
T Consensus        97 ~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  168 (255)
T 2q2v_A           97 QFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTK--VVGLE  168 (255)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999988877999999999887765443      344555555  55554

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.88  E-value=2.2e-22  Score=138.23  Aligned_cols=138  Identities=15%  Similarity=0.117  Sum_probs=115.4

Q ss_pred             ccccccC--CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVH--YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~--G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++  |+.|++++|+.+.++++.+++   +. ++.++.+|++|+++++++++++.+++|++|++   ||......+
T Consensus        19 a~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~   94 (254)
T 3kzv_A           19 VDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GD-RFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQN   94 (254)
T ss_dssp             HHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GG-GEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTT
T ss_pred             HHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CC-ceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECCcccCCCCC
Confidence            4567776  578999999998888877766   32 68999999999999999999999999999999   787545578


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++++++.++|+|++++ |+|||+||..+..+.++.      +++...|+.  +|++|
T Consensus        95 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  167 (254)
T 3kzv_A           95 VNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAM--TLANE  167 (254)
T ss_dssp             TTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHHHHHHH--HHHhh
Confidence            88999999999999999999999999999998765 999999999988776554      345556665  55554

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.88  E-value=7.7e-23  Score=140.45  Aligned_cols=138  Identities=22%  Similarity=0.252  Sum_probs=114.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        22 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~   96 (254)
T 1hdc_A           22 ARQAVAAGARVVLADVLDEEGAATAREL---GD-AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIS-TGMFLE   96 (254)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHTT---GG-GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCSCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            5678899999999999988777766655   32 58889999999999999999999999999999   7765 336677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++.      +++...|+.  ++++|
T Consensus        97 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  168 (254)
T 1hdc_A           97 TESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSK--LAAVE  168 (254)
T ss_dssp             GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999988777999999999887765443      344555555  44443

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.88  E-value=3.6e-22  Score=137.37  Aligned_cols=143  Identities=16%  Similarity=0.028  Sum_probs=116.1

Q ss_pred             cccccc---CCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHh--hcCCcc--EE---ecC
Q 040927            2 KRSNQV---HYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSS--QFGKLD--IL---GGL   70 (147)
Q Consensus         2 ~~~l~~---~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~id--~l---ag~   70 (147)
                      ++.|++   +|++|++++|+.+.++++.+++.... +.++.++.+|++|+++++++++.+.+  .+|++|  ++   ||.
T Consensus        23 a~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~  102 (259)
T 1oaa_A           23 APQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             HHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCC
T ss_pred             HHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhccccccCCccEEEECCcc
Confidence            456777   89999999999988888888887642 23688999999999999999999988  678898  77   776


Q ss_pred             CCc-chhhhc-ccHHHHHHhHHHhhhhHHHHHHHHHHhhccC--CCCeEEEEcCCCCCCcCCCc------hhhhccccch
Q 040927           71 PDN-WYKMLT-QTYELAEKCIQTNYYGNKRMCEALIPLLQLS--DSPRIVNASSSMGKLKNITN------EWAKGVLSDW  140 (147)
Q Consensus        71 ~~~-~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~  140 (147)
                      ... ..++.+ .+.++|++.+++|+.|++++++.++|.|.++  +.|+|||+||.++..+.++.      +++...++. 
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~-  181 (259)
T 1oaa_A          103 LGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQ-  181 (259)
T ss_dssp             CCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCCCccHHHHHHHHHHHHHH-
Confidence            532 245667 6899999999999999999999999999887  56899999999988775543      345556665 


Q ss_pred             hhhhcc
Q 040927          141 MRCRRS  146 (147)
Q Consensus       141 ~al~~e  146 (147)
                       ++++|
T Consensus       182 -~la~e  186 (259)
T 1oaa_A          182 -VLAAE  186 (259)
T ss_dssp             -HHHHH
T ss_pred             -HHHhh
Confidence             56655

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.88  E-value=8.3e-23  Score=144.81  Aligned_cols=141  Identities=17%  Similarity=0.106  Sum_probs=116.3

Q ss_pred             ccccccCCcEEEEeecC-----hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            2 KRSNQVHYSMGEATTKD-----EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      ++.|+++|++|+++.|+     .+.++++.+.+...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. .
T Consensus        22 a~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~-~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~-~   99 (324)
T 3u9l_A           22 AEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDV-DLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHM-V   99 (324)
T ss_dssp             HHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC-B
T ss_pred             HHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCC-cEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-C
Confidence            57789999999988775     4556666666666665 69999999999999999999999999999999   7776 4


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC-------chhhhccccchhhhhcc
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT-------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-------~~~~~~~~~~~~al~~e  146 (147)
                      ..++.+.+.++|++.+++|+.|+++++++++|+|++++.|+||++||.++..+.++       ++++...++.  ++++|
T Consensus       100 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  177 (324)
T 3u9l_A          100 FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAV--QYARE  177 (324)
T ss_dssp             CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHHHHHHHHHHHH--HHHHH
Confidence            57788899999999999999999999999999999888899999999887743222       3355566666  56554

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.88  E-value=5.9e-23  Score=141.42  Aligned_cols=140  Identities=14%  Similarity=0.093  Sum_probs=116.2

Q ss_pred             ccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|+++ .++.+..++..+++...+. ++.++.||++|+++++++++++.+++|++|++   ||......++
T Consensus        25 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~  103 (259)
T 3edm_A           25 AIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGR-SALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTI  103 (259)
T ss_dssp             HHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTS-CCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCT
T ss_pred             HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCCh
Confidence            57789999999998 5667777888888877765 68999999999999999999999999999999   7765455778


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC-CcCCC------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK-LKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.|++++++.++|.|.+  +|+||++||..+. .+.++      ++++...++.  ++++|
T Consensus       104 ~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  175 (259)
T 3edm_A          104 AEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTR--GLAKE  175 (259)
T ss_dssp             TTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHHHHHHHHHHHHH--HHHHH
Confidence            89999999999999999999999999999976  4899999998876 44333      3445566666  55544

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.88  E-value=2.2e-22  Score=140.66  Aligned_cols=141  Identities=13%  Similarity=0.029  Sum_probs=115.8

Q ss_pred             ccccccCCcEEEEee-cChhhHHHHHHHHH-hcCCCceEEEEecCCCHH-----------------HHHHHHHHHHhhcC
Q 040927            2 KRSNQVHYSMGEATT-KDEKRGLAAVEKLK-NSGCDNVIFHLLDVTDPA-----------------SVDSLVHFVSSQFG   62 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~-r~~~~~~~~~~~l~-~~~~~~~~~~~~D~~~~~-----------------~~~~~~~~~~~~~g   62 (147)
                      ++.|+++|++|++++ |+.+.++++.+++. ..+. ++.++.+|++|++                 ++.++++++.+.+|
T Consensus        26 a~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g  104 (291)
T 1e7w_A           26 AEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWG  104 (291)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCC-eeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcC
Confidence            567889999999999 99988888888886 4444 6899999999999                 99999999999999


Q ss_pred             CccEE---ecCCCcchhhhccc--------------HHHHHHhHHHhhhhHHHHHHHHHHhhccCC------CCeEEEEc
Q 040927           63 KLDIL---GGLPDNWYKMLTQT--------------YELAEKCIQTNYYGNKRMCEALIPLLQLSD------SPRIVNAS  119 (147)
Q Consensus        63 ~id~l---ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~is  119 (147)
                      ++|++   ||... ..++.+.+              .++|++.+++|+.+++++++.++|.|.+++      .|+|||+|
T Consensus       105 ~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~is  183 (291)
T 1e7w_A          105 RCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV  183 (291)
T ss_dssp             CCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEEC
T ss_pred             CCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEe
Confidence            99999   77653 35666777              899999999999999999999999998876      68999999


Q ss_pred             CCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927          120 SSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus       120 S~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      |..+..+.++.      +++...|+.  +|++|
T Consensus       184 S~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  214 (291)
T 1e7w_A          184 DAMTNQPLLGYTIYTMAKGALEGLTR--SAALE  214 (291)
T ss_dssp             CTTTTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             chhhcCCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            99988775543      344555555  55544

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.88  E-value=4.5e-23  Score=142.38  Aligned_cols=142  Identities=16%  Similarity=0.124  Sum_probs=115.8

Q ss_pred             ccccccCCcEEEEeecChhhH-HHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRG-LAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~-~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.... ++..+++....+.++.++.||++|+++++++++++.+++|++|++   ||.. ...++
T Consensus        39 a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~-~~~~~  117 (267)
T 3gdg_A           39 ARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGAT-ADSGI  117 (267)
T ss_dssp             HHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCC-CCSCT
T ss_pred             HHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCc
Confidence            577899999999999876544 666677765423369999999999999999999999999999999   7766 34667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC--C------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI--T------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~--~------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+..  +      ++++...|+.  ++++|
T Consensus       118 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  192 (267)
T 3gdg_A          118 LDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMAR--SLANE  192 (267)
T ss_dssp             TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcchHHHHHHHHHHH--HHHHH
Confidence            788999999999999999999999999999988889999999988876542  1      2345555665  55555

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.88  E-value=2.1e-22  Score=138.85  Aligned_cols=140  Identities=12%  Similarity=0.087  Sum_probs=114.5

Q ss_pred             ccccccCCcEEEEeecC---hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927            2 KRSNQVHYSMGEATTKD---EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~   75 (147)
                      ++.|+++|++|++++|+   .+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||... ..
T Consensus        28 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~  105 (262)
T 3ksu_A           28 AKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA-KVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL-KK  105 (262)
T ss_dssp             HHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTC-EEEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCC-SS
T ss_pred             HHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CC
Confidence            67899999999998764   4567778888877765 79999999999999999999999999999999   78763 47


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc------CCCchhhhccccchhhhhccC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK------NITNEWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------~~~~~~~~~~~~~~~al~~e~  147 (147)
                      ++.+.+.++|++.+++|+.+++++++.++|+|.+  .|+||++||..+..+      |..++++...|+.  +|++|+
T Consensus       106 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e~  179 (262)
T 3ksu_A          106 PIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP--NGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTR--AASKEL  179 (262)
T ss_dssp             CGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEEEEEECCCHHHHHHCCCCC-----CHHHHHHH--HHHHHT
T ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCEEEEEechhhccCCCCCchhHHHHHHHHHHHH--HHHHHH
Confidence            7888999999999999999999999999999943  489999999876543      4455667777777  666653

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.88  E-value=2.3e-22  Score=140.82  Aligned_cols=140  Identities=18%  Similarity=0.117  Sum_probs=115.6

Q ss_pred             ccccccCCcEEEEeecCh--hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDE--KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+.  ...+++.+.+...+. ++.++.+|++|+++++++++++.+++|++|++   ||......+
T Consensus        66 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~  144 (294)
T 3r3s_A           66 AIAYAREGADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPE  144 (294)
T ss_dssp             HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSS
T ss_pred             HHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCC
Confidence            578899999999999873  456666666766665 68999999999999999999999999999999   776544567


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++++++.++|.|.+  +|+|||+||..+..+.++.      +++...|+.  +|++|
T Consensus       145 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  216 (294)
T 3r3s_A          145 IKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAILNYSR--GLAKQ  216 (294)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            888999999999999999999999999999965  3899999999988776543      345556665  55544

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.88  E-value=4.6e-22  Score=139.46  Aligned_cols=124  Identities=22%  Similarity=0.206  Sum_probs=108.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCC--ceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCD--NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+..  ++.++.+|++|+++++++++++.+++|++|++   ||... ..+
T Consensus        43 a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~  121 (297)
T 1xhl_A           43 AVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANL-ADG  121 (297)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCS
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCc-CCC
Confidence            5678899999999999998888888888765431  58899999999999999999999999999999   77653 244


Q ss_pred             --hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           77 --MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        77 --~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                        +.+.+.++|++.+++|+.+++.+++.++|.|.+++ |+|||+||..+..+.
T Consensus       122 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~  173 (297)
T 1xhl_A          122 TANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA  173 (297)
T ss_dssp             CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC
T ss_pred             CccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC
Confidence              77889999999999999999999999999998776 999999998887665

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.88  E-value=1.3e-22  Score=140.37  Aligned_cols=139  Identities=17%  Similarity=0.187  Sum_probs=116.9

Q ss_pred             ccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|+++ .|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++
T Consensus        44 a~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~-~~~~~  121 (267)
T 3u5t_A           44 AARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIM-PLTTI  121 (267)
T ss_dssp             HHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCh
Confidence            57789999999988 4566778888888887775 68999999999999999999999999999999   7876 44778


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|++  +|+|||+||..+..+.++      ++++...|+.  +|++|
T Consensus       122 ~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  192 (267)
T 3u5t_A          122 AETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTH--VLSKE  192 (267)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            88999999999999999999999999999976  389999999887665544      3456666666  66665

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.88  E-value=2.4e-22  Score=139.29  Aligned_cols=139  Identities=17%  Similarity=0.149  Sum_probs=114.9

Q ss_pred             ccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++++ .+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++
T Consensus        48 a~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~  125 (271)
T 3v2g_A           48 AKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIW-HSAPL  125 (271)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCC-CCCCh
Confidence            57889999999999665 5677888888887775 68999999999999999999999999999999   7776 34778


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc-CCC------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK-NIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-~~~------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.+  +|+||++||..+..+ .++      ++++...|+.  ++++|
T Consensus       126 ~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  197 (271)
T 3v2g_A          126 EETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSASKAALAGLTK--GLARD  197 (271)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            89999999999999999999999999999975  489999999776554 232      2345566666  55554

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.88  E-value=2.7e-22  Score=139.09  Aligned_cols=140  Identities=11%  Similarity=0.027  Sum_probs=114.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+ +.+++..+++...+. ++.++.+|++|+++++++.+. .+++|++|++   ||.. ...++
T Consensus        47 ia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~-~~~~g~iD~lv~nAg~~-~~~~~  122 (273)
T 3uf0_A           47 IAHGYARAGAHVLAWGRT-DGVKEVADEIADGGG-SAEAVVADLADLEGAANVAEE-LAATRRVDVLVNNAGII-ARAPA  122 (273)
T ss_dssp             HHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTC-EEEEEECCTTCHHHHHHHHHH-HHHHSCCCEEEECCCCC-CCCCG
T ss_pred             HHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHH-HHhcCCCcEEEECCCCC-CCCCc
Confidence            357789999999999976 456777788877665 689999999999999999544 4567999999   7876 34778


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.|++++++.++|.|.+++.|+||++||..+..+.++.      +++...|+.  ++++|
T Consensus       123 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  195 (273)
T 3uf0_A          123 EEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTR--ALASE  195 (273)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHHHHHH--HHHHH
Confidence            88999999999999999999999999999998888999999999988776543      345556665  55544

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.88  E-value=1.4e-22  Score=140.65  Aligned_cols=120  Identities=21%  Similarity=0.155  Sum_probs=103.9

Q ss_pred             ccccccCCcEEEEeecC------------hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--
Q 040927            2 KRSNQVHYSMGEATTKD------------EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--   67 (147)
                      ++.|+++|++|++++|+            .+.+++..+++...+. ++.++.+|++|+++++++++++.+++|++|++  
T Consensus        30 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~  108 (278)
T 3sx2_A           30 AVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRDRESLSAALQAGLDELGRLDIVVA  108 (278)
T ss_dssp             HHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEE
T ss_pred             HHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57789999999999987            6777777777777765 69999999999999999999999999999999  


Q ss_pred             -ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcC
Q 040927           68 -GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKN  127 (147)
Q Consensus        68 -ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~  127 (147)
                       ||.... ..    +.++|++.+++|+.+++++++.++|+|.+++ .|+||++||.++..+.
T Consensus       109 nAg~~~~-~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  165 (278)
T 3sx2_A          109 NAGIAPM-SA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGV  165 (278)
T ss_dssp             CCCCCCC-SS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC
T ss_pred             CCCCCCC-CC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCC
Confidence             776532 22    5789999999999999999999999998764 6899999999887664

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.88  E-value=1.3e-22  Score=140.28  Aligned_cols=142  Identities=15%  Similarity=0.107  Sum_probs=117.6

Q ss_pred             CccccccCCcEEEEee-cChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATT-KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++ ++.+..++..+++...+. ++.++.+|++|+++++++++++.+.+|++|++   ||.. ...+
T Consensus        41 ~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~-~~~~  118 (269)
T 3gk3_A           41 ISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGR-DFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGIT-RDAT  118 (269)
T ss_dssp             HHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTC-CCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC-CCBC
T ss_pred             HHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCcc
Confidence            3678899999999998 566667777777766654 69999999999999999999999999999999   7766 3467


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.++.      +++...|+.  +|++|
T Consensus       119 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  192 (269)
T 3gk3_A          119 FMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTK--TLALE  192 (269)
T ss_dssp             TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHHHHHHH--HHHHH
Confidence            778899999999999999999999999999988878999999998877665443      345555665  55554

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.88  E-value=3.3e-22  Score=137.64  Aligned_cols=140  Identities=19%  Similarity=0.133  Sum_probs=117.2

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++   +. ++.++.+|++|+++++++++++.++++++|++   ||......++
T Consensus        25 ~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~  100 (261)
T 3n74_A           25 MAKRFAKGGAKVVIVDRDKAGAERVAGEI---GD-AALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNA  100 (261)
T ss_dssp             HHHHHHHTTCEEEEEESCHHHHHHHHHHH---CT-TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCG
T ss_pred             HHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CC-ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCc
Confidence            36788999999999999998888877766   33 58999999999999999999999999999999   7776445677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC----CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD----SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|+|.+++    .++||++||..+..+.+..      +++...|+.  +|++|
T Consensus       101 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  177 (261)
T 3n74_A          101 ELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTK--ALAIE  177 (261)
T ss_dssp             GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHHHHHHHHH--HHHHH
Confidence            7889999999999999999999999999998753    5789999999988776543      345566666  55554

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.87  E-value=7.6e-23  Score=141.42  Aligned_cols=135  Identities=19%  Similarity=0.170  Sum_probs=112.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++       ...++.++.+|++|+++++++++++.+.+|++|++   ||.. ...++.
T Consensus        33 a~~l~~~G~~V~~~~r~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~  104 (266)
T 3p19_A           33 ARRFSEEGHPLLLLARRVERLKAL-------NLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMM-LLGQID  104 (266)
T ss_dssp             HHHHHHTTCCEEEEESCHHHHHTT-------CCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCC-CCCCTT
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHh-------hcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcC-CCCCcc
Confidence            567889999999999997654432       12258899999999999999999999999999999   7776 346788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|.|++++.|+|||+||.++..+.++.      +++...|+.  +|++|
T Consensus       105 ~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  176 (266)
T 3p19_A          105 TQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISE--NVREE  176 (266)
T ss_dssp             TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999998888999999999988776543      345555655  55554

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.87  E-value=1.7e-22  Score=137.14  Aligned_cols=127  Identities=19%  Similarity=0.187  Sum_probs=109.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++....+.++.++.||++|+++++++++++.+.+|++|++   ||.. ...++.
T Consensus        19 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~   97 (235)
T 3l77_A           19 ARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLG-YFKRLE   97 (235)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCC-CCCCTT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccc-cccCcc
Confidence            577899999999999999999998888863323369999999999999999999999999999999   7776 457788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN  130 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  130 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+ +++++|+++|..+..+.+..
T Consensus        98 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~~  148 (235)
T 3l77_A           98 ELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR-TGGLALVTTSDVSARLIPYG  148 (235)
T ss_dssp             TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCGGGSSCCTTC
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEecchhcccCCCc
Confidence            8999999999999999999999999999944 45889999998887765543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.87  E-value=4.5e-22  Score=137.11  Aligned_cols=135  Identities=10%  Similarity=0.018  Sum_probs=109.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+.+...+.      .+.++.+|++|+++++++++++.+.+|++|++   ||.... .+ .
T Consensus        44 a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~-~~-~  115 (260)
T 3gem_A           44 ALRLLEHGHRVIISYRTEHASVTELRQA------GAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLA-ET-P  115 (260)
T ss_dssp             HHHHHHTTCCEEEEESSCCHHHHHHHHH------TCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCC-CC-T
T ss_pred             HHHHHHCCCEEEEEeCChHHHHHHHHhc------CCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCC-CC-C
Confidence            5778999999999999987654443332      26889999999999999999999999999999   776533 22 4


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|+|.+++.|+||++||..+..+.++.      +++...|+.  ++++|
T Consensus       116 ~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  187 (260)
T 3gem_A          116 GEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTL--SFAAR  187 (260)
T ss_dssp             TCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHH--HHHHH
Confidence            6778999999999999999999999999999888999999999988776543      345556666  55554

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.87  E-value=2e-22  Score=139.50  Aligned_cols=142  Identities=13%  Similarity=0.089  Sum_probs=118.0

Q ss_pred             CccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++++| +.+..+.+.++++..+. ++.++.+|++|++++.++++++.+.++++|++   ||... ..+
T Consensus        45 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~-~~~  122 (271)
T 4iin_A           45 IAKTLASMGLKVWINYRSNAEVADALKNELEEKGY-KAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVR-DKL  122 (271)
T ss_dssp             HHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCC
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCC-Ccc
Confidence            35788999999999999 45556667777777665 69999999999999999999999999999999   77763 467


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.++.      +.+...++.  ++++|
T Consensus       123 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  196 (271)
T 4iin_A          123 AIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSK--SFAYE  196 (271)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHHHHHHHHH--HHHHH
Confidence            778899999999999999999999999999998888999999998877665443      345555655  55544

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.87  E-value=4.5e-22  Score=139.12  Aligned_cols=140  Identities=18%  Similarity=0.118  Sum_probs=114.2

Q ss_pred             ccccccCCcEEEEeecChhh-HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKR-GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+. .+.+.+.+...+. ++.++.+|++|+++++++++++.+++|++|++   ||......++
T Consensus        64 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~  142 (291)
T 3ijr_A           64 SIAFAKEGANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGL  142 (291)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSG
T ss_pred             HHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCc
Confidence            57789999999999998764 4445555555554 68999999999999999999999999999999   7766455677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|+|++  +|+||++||..+..+.++      ++++...|+.  ++++|
T Consensus       143 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  213 (291)
T 3ijr_A          143 EYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSATKGAIVAFTR--SLSQS  213 (291)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHHHHHHHHHHHH--HHHHH
Confidence            88999999999999999999999999999965  479999999988766543      3445566666  55554

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.87  E-value=7.5e-22  Score=137.24  Aligned_cols=141  Identities=21%  Similarity=0.141  Sum_probs=115.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCC--ceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCD--NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+..  ++.++.+|++|+++++++++++.+++|++|++   ||.... .+
T Consensus        23 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~-~~  101 (280)
T 1xkq_A           23 AILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIP-DA  101 (280)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-CT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC-CC
Confidence            5678899999999999998888888888765431  58899999999999999999999999999999   776532 44


Q ss_pred             ----hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC-CCc------hhhhccccchhhhhc
Q 040927           77 ----MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN-ITN------EWAKGVLSDWMRCRR  145 (147)
Q Consensus        77 ----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-~~~------~~~~~~~~~~~al~~  145 (147)
                          +.+.+.++|++.+++|+.+++.+++.++|.|.+++ |+|||+||..+..+. ++.      +++...++.  ++++
T Consensus       102 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~--~la~  178 (280)
T 1xkq_A          102 FGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTR--STAI  178 (280)
T ss_dssp             TCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHH--HHHH
T ss_pred             CCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccHHHHHHHHHHHHHH--HHHH
Confidence                67889999999999999999999999999998765 899999999887665 332      344555555  4544


Q ss_pred             c
Q 040927          146 S  146 (147)
Q Consensus       146 e  146 (147)
                      |
T Consensus       179 e  179 (280)
T 1xkq_A          179 D  179 (280)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.87  E-value=8e-22  Score=136.29  Aligned_cols=138  Identities=12%  Similarity=0.043  Sum_probs=114.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+ ...+..+.+|+++++++++++    ++++++|++   ||.. ...++
T Consensus        27 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~----~~~g~id~lv~nAg~~-~~~~~  101 (267)
T 3t4x_A           27 ATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI----EKYPKVDILINNLGIF-EPVEY  101 (267)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHH----HHCCCCSEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHH----HhcCCCCEEEECCCCC-CCCcc
Confidence            57789999999999999999999999887764 235788999999999887765    457899999   7776 34677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++.      +++...++.  ++++|
T Consensus       102 ~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  174 (267)
T 3t4x_A          102 FDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSR--SLAEL  174 (267)
T ss_dssp             GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHHHHHH--HHHHH
Confidence            88999999999999999999999999999998888999999999988776543      345556665  55554

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.87  E-value=4e-22  Score=138.09  Aligned_cols=143  Identities=21%  Similarity=0.181  Sum_probs=118.2

Q ss_pred             CccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|+++ .|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.+|++|++   ||......+
T Consensus        42 ~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~  120 (272)
T 4e3z_A           42 VCRLAARQGWRVGVNYAANREAADAVVAAITESGG-EAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQR  120 (272)
T ss_dssp             HHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCC
T ss_pred             HHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCC
Confidence            357889999999887 7788888888888877765 69999999999999999999999999999999   787644467


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC---CCCeEEEEcCCCCCCcCCC-------chhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS---DSPRIVNASSSMGKLKNIT-------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~iv~isS~~~~~~~~~-------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++++++.++|.|.+.   +.|+||++||.++..+.++       ++.+...|+.  ++++|
T Consensus       121 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  198 (272)
T 4e3z_A          121 VDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTI--GLARE  198 (272)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence            8889999999999999999999999999999863   4589999999887665442       2345555655  55554

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.87  E-value=1.3e-21  Score=136.16  Aligned_cols=139  Identities=15%  Similarity=0.112  Sum_probs=113.1

Q ss_pred             ccccccCCcEEEEeecChhh-HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKR-GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+. .+++.+++...+. ++.++.+|++|+++++++++++.+.+|++|++   ||.. ...++
T Consensus        46 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~  123 (283)
T 1g0o_A           46 AMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV-SFGHV  123 (283)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCc
Confidence            56788999999999998654 5666677776665 68899999999999999999999999999999   7766 34677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC-------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT-------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.  +.|+||++||..+..+.++       ++++...|+.  ++++|
T Consensus       124 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  195 (283)
T 1g0o_A          124 KDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFAR--CMAID  195 (283)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cCCeEEEEechhhccCCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence            7889999999999999999999999999993  4589999999888766443       2344555555  55544

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.87  E-value=8.9e-22  Score=135.06  Aligned_cols=137  Identities=19%  Similarity=0.115  Sum_probs=114.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. ++.++.+|++|+++++++++.+.+.+|++|++   ||.. ...++.
T Consensus        23 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~   97 (253)
T 1hxh_A           23 VKLLLGEGAKVAFSDINEAAGQQLAAEL---GE-RSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGIL-LPGDME   97 (253)
T ss_dssp             HHHHHHTTCEEEEECSCHHHHHHHHHHH---CT-TEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCC-CCBCTT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcc
Confidence            5678899999999999988888777776   33 58899999999999999999999999999999   7766 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|++++ |+||++||..+..+.++.      +++...+..  ++++|
T Consensus        98 ~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  168 (253)
T 1hxh_A           98 TGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTR--AAALS  168 (253)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHHHHHH--HHHHH
Confidence            889999999999999999999999999998877 999999999888765543      344555555  45443

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.87  E-value=8.1e-22  Score=135.70  Aligned_cols=141  Identities=12%  Similarity=-0.049  Sum_probs=116.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++.... +.++.++.+|++|+++++++++++.+++| +|++   ||.. ...++
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-id~lv~~Ag~~-~~~~~  101 (260)
T 2z1n_A           24 ALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG-ADILVYSTGGP-RPGRF  101 (260)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC-CSEEEECCCCC-CCBCG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC-CCEEEECCCCC-CCCCc
Confidence            56788999999999999988888888876531 22588999999999999999999999999 9999   7765 34677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++.      +++...++.  ++++|
T Consensus       102 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  174 (260)
T 2z1n_A          102 MELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVR--TLALE  174 (260)
T ss_dssp             GGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            78899999999999999999999999999988777999999999888765543      234445555  44443

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.87  E-value=4e-22  Score=139.13  Aligned_cols=141  Identities=13%  Similarity=0.089  Sum_probs=111.7

Q ss_pred             ccccccCCcEEEEeecCh-hhHHHHHHHHH-hcCCCceEEEEecCCC----HHHHHHHHHHHHhhcCCccEE---ecCCC
Q 040927            2 KRSNQVHYSMGEATTKDE-KRGLAAVEKLK-NSGCDNVIFHLLDVTD----PASVDSLVHFVSSQFGKLDIL---GGLPD   72 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~-~~~~~~~~~~~~D~~~----~~~~~~~~~~~~~~~g~id~l---ag~~~   72 (147)
                      ++.|+++|++|++++|+. +.++++.+++. ..+. ++.++.+|++|    +++++++++++.+.+|++|++   ||...
T Consensus        40 a~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~  118 (288)
T 2x9g_A           40 AVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN-TAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFY  118 (288)
T ss_dssp             HHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCC-ceEEEEeecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence            567889999999999998 88888888886 4443 68999999999    999999999999999999999   77653


Q ss_pred             cchhh-----hc-----ccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC------CCeEEEEcCCCCCCcCCCc------
Q 040927           73 NWYKM-----LT-----QTYELAEKCIQTNYYGNKRMCEALIPLLQLSD------SPRIVNASSSMGKLKNITN------  130 (147)
Q Consensus        73 ~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~isS~~~~~~~~~~------  130 (147)
                      . .++     .+     .+.++|++.+++|+.+++.+++.++|.|.+++      .|+||++||..+..+.++.      
T Consensus       119 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  197 (288)
T 2x9g_A          119 P-TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMG  197 (288)
T ss_dssp             C-CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTTSCCTTCHHHHHH
T ss_pred             C-CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCCCCCCchHHHH
Confidence            2 444     45     78899999999999999999999999998765      6899999999988775443      


Q ss_pred             hhhhccccchhhhhcc
Q 040927          131 EWAKGVLSDWMRCRRS  146 (147)
Q Consensus       131 ~~~~~~~~~~~al~~e  146 (147)
                      +++...|+.  ++++|
T Consensus       198 Kaa~~~l~~--~la~e  211 (288)
T 2x9g_A          198 KHALVGLTQ--SAALE  211 (288)
T ss_dssp             HHHHHHHHH--HHHHH
T ss_pred             HHHHHHHHH--HHHHH
Confidence            344555555  55544

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=6.6e-22  Score=137.01  Aligned_cols=125  Identities=17%  Similarity=0.158  Sum_probs=109.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   ||.. ...++.
T Consensus        48 a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~-~~~~~~  125 (272)
T 1yb1_A           48 AYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVV-YTSDLF  125 (272)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCC-CCCCCG
T ss_pred             HHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCcC-CCcchh
Confidence            567889999999999999888888888877665 68999999999999999999999999999999   7765 335667


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+
T Consensus       126 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~  175 (272)
T 1yb1_A          126 ATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP  175 (272)
T ss_dssp             GGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC
Confidence            78889999999999999999999999999888789999999998876643

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.87  E-value=9.3e-22  Score=137.84  Aligned_cols=139  Identities=14%  Similarity=0.061  Sum_probs=112.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---ch
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---WY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~~   75 (147)
                      ++.|+++|++|++++|+....+.+.+.....+  ++.++.||++|+++++++++++.+++|++|++   ||....   ..
T Consensus        49 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~  126 (296)
T 3k31_A           49 AKAVCAQGAEVALTYLSETFKKRVDPLAESLG--VKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKG  126 (296)
T ss_dssp             HHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT--CCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTS
T ss_pred             HHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccC
Confidence            57789999999999999765555444444444  36889999999999999999999999999999   777632   25


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ++.+.+.++|++.+++|+.+++++++.++|.|.+  +|+|||+||..+..+.+..      +++...|+.  +|++|
T Consensus       127 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~e  199 (296)
T 3k31_A          127 RYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYNVMGVCKAALEASVK--YLAVD  199 (296)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTTHHHHHHHHHHHHHH--HHHHH
T ss_pred             ChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCchhhHHHHHHHHHHHH--HHHHH
Confidence            6778999999999999999999999999999976  5899999999988775543      345566666  55554

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.87  E-value=1.3e-21  Score=137.00  Aligned_cols=139  Identities=15%  Similarity=0.080  Sum_probs=111.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---ch
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---WY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~~   75 (147)
                      ++.|+++|++|++++|+....+ ..+++....+ ++.++.||++|+++++++++++.+++|++|++   ||....   ..
T Consensus        50 a~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~  127 (293)
T 3grk_A           50 AKAAREAGAELAFTYQGDALKK-RVEPLAEELG-AFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTG  127 (293)
T ss_dssp             HHHHHHTTCEEEEEECSHHHHH-HHHHHHHHHT-CEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTS
T ss_pred             HHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhcC-CceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccc
Confidence            5778999999999999964333 3344433333 58899999999999999999999999999999   777632   35


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ++.+.+.++|++.+++|+.+++++++.++|+|++  .|+|||+||..+..+.+..      +++...|+.  +|++|
T Consensus       128 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  200 (293)
T 3grk_A          128 RYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNVMGVAKAALEASVK--YLAVD  200 (293)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHHHHHHHHHHHHHHH--HHHHH
Confidence            6778999999999999999999999999999976  5899999999988775543      345566666  55554

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.87  E-value=8.5e-22  Score=134.61  Aligned_cols=135  Identities=20%  Similarity=0.101  Sum_probs=110.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +   +.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        22 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~-~~~~~~   94 (245)
T 1uls_A           22 LELFAKEGARLVACDIEEGPLREAAEAV---G---AHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGIT-RDNFHW   94 (245)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHTT---T---CEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHc---C---CEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            5678899999999999987776655443   2   6788999999999999999999999999999   7766 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|++++.|+||++||.. ..+.++.      +++...|+.  ++++|
T Consensus        95 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~--~la~e  165 (245)
T 1uls_A           95 KMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTR--TLALE  165 (245)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            88999999999999999999999999999988789999999987 6554432      344555555  55544

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.87  E-value=1.3e-21  Score=134.94  Aligned_cols=141  Identities=14%  Similarity=0.037  Sum_probs=113.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---ch
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---WY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~~   75 (147)
                      ++.|+++|++|++++|+....+.+.+.....+..++.++.||++|+++++++++++.+++|++|++   ||....   ..
T Consensus        26 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~  105 (266)
T 3oig_A           26 ARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVG  105 (266)
T ss_dssp             HHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSS
T ss_pred             HHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCCeeEEEEcccccccccccc
Confidence            577899999999999987555554444444444368999999999999999999999999999999   776532   35


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ++.+.+.++|+..+++|+.+++.+++.++|.|++  +|+||++||..+..+.+..      +++...|+.  +|++|
T Consensus       106 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  178 (266)
T 3oig_A          106 EYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYNVMGVAKASLDASVK--YLAAD  178 (266)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHH--HHHHH
T ss_pred             chhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcchhHHHHHHHHHHHH--HHHHH
Confidence            6778999999999999999999999999999975  4899999999988776543      345556666  55554

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.87  E-value=4e-22  Score=138.42  Aligned_cols=124  Identities=20%  Similarity=0.134  Sum_probs=108.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+  ++.++.+|++|+++++++++++.+.++++|++   ||... ..++.
T Consensus        46 a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~  122 (276)
T 2b4q_A           46 AQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSW-GAALE  122 (276)
T ss_dssp             HHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCC-CCCTT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcc
Confidence            56788999999999999988888888886544  58889999999999999999999999999999   77663 36677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC----CeEEEEcCCCCCCcCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS----PRIVNASSSMGKLKNI  128 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~iv~isS~~~~~~~~  128 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|++++.    |+||++||..+..+.+
T Consensus       123 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~  176 (276)
T 2b4q_A          123 SYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG  176 (276)
T ss_dssp             SCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC
Confidence            8889999999999999999999999999987655    8999999988876544

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.87  E-value=2.8e-22  Score=137.81  Aligned_cols=139  Identities=18%  Similarity=0.164  Sum_probs=105.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc---h
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW---Y   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~---~   75 (147)
                      ++.|+++|++|++++|+.+.+++..+++   +. ++.++.+|++|+++++++++++.+++|++|++   ||.....   .
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~   99 (257)
T 3tpc_A           24 TRMLAQEGATVLGLDLKPPAGEEPAAEL---GA-AVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILG   99 (257)
T ss_dssp             HHHHHHTTCEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEE
T ss_pred             HHHHHHCCCEEEEEeCChHHHHHHHHHh---CC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCcccc
Confidence            5778999999999999988877776665   33 58899999999999999999999999999999   7765321   2


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC------CCCeEEEEcCCCCCCcCCCc------hhhhccccchhhh
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS------DSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRC  143 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al  143 (147)
                      +..+.+.++|++.+++|+.+++++++.++|.|.++      +.|+||++||..+..+.++.      +++...|+.  ++
T Consensus       100 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~l  177 (257)
T 3tpc_A          100 RSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTL--PA  177 (257)
T ss_dssp             TTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHH--HH
T ss_pred             ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcchHHHHHHHHHHHH--HH
Confidence            23367889999999999999999999999999875      56899999999887765543      345555655  55


Q ss_pred             hcc
Q 040927          144 RRS  146 (147)
Q Consensus       144 ~~e  146 (147)
                      ++|
T Consensus       178 a~e  180 (257)
T 3tpc_A          178 ARE  180 (257)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            544

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.87  E-value=1e-21  Score=139.43  Aligned_cols=141  Identities=13%  Similarity=0.029  Sum_probs=115.5

Q ss_pred             ccccccCCcEEEEee-cChhhHHHHHHHHH-hcCCCceEEEEecCCCHH-----------------HHHHHHHHHHhhcC
Q 040927            2 KRSNQVHYSMGEATT-KDEKRGLAAVEKLK-NSGCDNVIFHLLDVTDPA-----------------SVDSLVHFVSSQFG   62 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~-r~~~~~~~~~~~l~-~~~~~~~~~~~~D~~~~~-----------------~~~~~~~~~~~~~g   62 (147)
                      ++.|+++|++|++++ |+.+.++++.+++. ..+. ++.++.+|++|++                 +++++++++.+.+|
T Consensus        63 a~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g  141 (328)
T 2qhx_A           63 AEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWG  141 (328)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCC-eEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcC
Confidence            567889999999999 99988888888886 3443 6899999999999                 99999999999999


Q ss_pred             CccEE---ecCCCcchhhhccc--------------HHHHHHhHHHhhhhHHHHHHHHHHhhccCC------CCeEEEEc
Q 040927           63 KLDIL---GGLPDNWYKMLTQT--------------YELAEKCIQTNYYGNKRMCEALIPLLQLSD------SPRIVNAS  119 (147)
Q Consensus        63 ~id~l---ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~is  119 (147)
                      ++|++   ||... ..++.+.+              .++|++.+++|+.+++.+++.++|.|.+++      .|+||++|
T Consensus       142 ~iD~lVnnAG~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~is  220 (328)
T 2qhx_A          142 RCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV  220 (328)
T ss_dssp             CCCEEEECCCCCC-CCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEEC
T ss_pred             CCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEEC
Confidence            99999   77653 35566677              899999999999999999999999998776      68999999


Q ss_pred             CCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927          120 SSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus       120 S~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      |..+..+.++.      +.+...|+.  +|++|
T Consensus       221 S~~~~~~~~~~~~Y~asKaal~~l~~--~la~e  251 (328)
T 2qhx_A          221 DAMTNQPLLGYTIYTMAKGALEGLTR--SAALE  251 (328)
T ss_dssp             CTTTTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             chhhccCCCCcHHHHHHHHHHHHHHH--HHHHH
Confidence            99988775443      345555555  55544

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.87  E-value=3e-22  Score=137.90  Aligned_cols=142  Identities=14%  Similarity=0.036  Sum_probs=115.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhh-cCCccEE---ec--CC----
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQ-FGKLDIL---GG--LP----   71 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id~l---ag--~~----   71 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++.+.+. +|++|++   ||  ..    
T Consensus        22 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~  100 (260)
T 2qq5_A           22 ALQLCKAGATVYITGRHLDTLRVVAQEAQSLGG-QCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILN  100 (260)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSS-EEEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHH
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECCccccccccc
Confidence            567889999999999999888888888877664 6889999999999999999999886 8999999   64  21    


Q ss_pred             CcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC-----Cchhhhccccchhhhhcc
Q 040927           72 DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI-----TNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-----~~~~~~~~~~~~~al~~e  146 (147)
                      ....++.+.+.++|+..+++|+.+++++++.++|.|.+++.|+|||+||..+..+.+     .++++...|+.  ++++|
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  178 (260)
T 2qq5_A          101 TRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPYGVGKAACDKLAA--DCAHE  178 (260)
T ss_dssp             TTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCCSSHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCCCCCchHHHHHHHHHHHH--HHHHH
Confidence            023456678889999999999999999999999999887789999999988765432     23345556655  45443

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.86  E-value=1.8e-22  Score=142.93  Aligned_cols=141  Identities=15%  Similarity=0.122  Sum_probs=118.0

Q ss_pred             ccccccCCcEEEEeecC----------hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---e
Q 040927            2 KRSNQVHYSMGEATTKD----------EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---G   68 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---a   68 (147)
                      ++.|+++|++|++++|+          .+.++++.+++...+. ++.++.+|++|+++++++++++.+++|++|++   |
T Consensus        44 a~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nA  122 (322)
T 3qlj_A           44 ALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG-EAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNA  122 (322)
T ss_dssp             HHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTC-EEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCC
T ss_pred             HHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            57789999999999987          6778888888887775 68999999999999999999999999999999   7


Q ss_pred             cCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC------CCeEEEEcCCCCCCcCCCc------hhhhcc
Q 040927           69 GLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD------SPRIVNASSSMGKLKNITN------EWAKGV  136 (147)
Q Consensus        69 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~isS~~~~~~~~~~------~~~~~~  136 (147)
                      |... ..++.+.+.++|++.+++|+.+++++++.++|.|.+..      +|+|||+||..+..+.++.      +++...
T Consensus       123 g~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~  201 (322)
T 3qlj_A          123 GIVR-DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIAT  201 (322)
T ss_dssp             CCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBTTCHHHHHHHHHHHH
T ss_pred             CCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCCCCccHHHHHHHHHH
Confidence            8763 46788899999999999999999999999999987532      3799999998877665433      445566


Q ss_pred             ccchhhhhcc
Q 040927          137 LSDWMRCRRS  146 (147)
Q Consensus       137 ~~~~~al~~e  146 (147)
                      |+.  ++++|
T Consensus       202 l~~--~la~e  209 (322)
T 3qlj_A          202 LTL--VGAAE  209 (322)
T ss_dssp             HHH--HHHHH
T ss_pred             HHH--HHHHH
Confidence            666  55554

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.86  E-value=1.2e-21  Score=135.89  Aligned_cols=140  Identities=20%  Similarity=0.103  Sum_probs=108.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHH---hcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLK---NSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~   75 (147)
                      ++.|+++|++|++++|+.+.++++.+++.   ..+. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...
T Consensus        23 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~  100 (278)
T 1spx_A           23 AVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQ-NVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAA-IPD  100 (278)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGG-GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC------
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCC-ceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCc
Confidence            56788999999999999988888888773   2232 58899999999999999999999999999999   7765 335


Q ss_pred             hhhcc----cHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC-CCcCCCc------hhhhccccchhhhh
Q 040927           76 KMLTQ----TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG-KLKNITN------EWAKGVLSDWMRCR  144 (147)
Q Consensus        76 ~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~-~~~~~~~------~~~~~~~~~~~al~  144 (147)
                      ++.+.    +.++|++.+++|+.+++.+++.++|.|++++ |+||++||..+ ..+.++.      +++...++.  +++
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~--~la  177 (278)
T 1spx_A          101 SQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTR--NTA  177 (278)
T ss_dssp             --------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHH--HHH
T ss_pred             ccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccHHHHHHHHHHHHHH--HHH
Confidence            56666    8999999999999999999999999998765 89999999988 6665433      344455555  444


Q ss_pred             cc
Q 040927          145 RS  146 (147)
Q Consensus       145 ~e  146 (147)
                      +|
T Consensus       178 ~e  179 (278)
T 1spx_A          178 ID  179 (278)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.86  E-value=6.6e-22  Score=136.49  Aligned_cols=118  Identities=20%  Similarity=0.179  Sum_probs=99.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++.   . ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        23 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~   97 (263)
T 2a4k_A           23 LDLFAREGASLVAVDREERLLAEAVAALE---A-EAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVA-HSALSW   97 (263)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHTCC---S-SEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGT-TTTC--
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHhc---C-ceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCC-CCCChh
Confidence            56788999999999999887777665552   2 58899999999999999999999999999999   7766 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                      +.+.++|++.+++|+.+++++++.++|.| ++ .|+||++||..+. +.
T Consensus        98 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~  143 (263)
T 2a4k_A           98 NLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GA  143 (263)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CC
Confidence            88999999999999999999999999999 54 6899999999887 54

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.86  E-value=2.7e-21  Score=132.83  Aligned_cols=127  Identities=27%  Similarity=0.207  Sum_probs=111.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   ||......++.
T Consensus        30 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~  108 (260)
T 3awd_A           30 VTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAE  108 (260)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcc
Confidence            567889999999999998888888888877665 68999999999999999999999999999999   77654246677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+.
T Consensus       109 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  159 (260)
T 3awd_A          109 DMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRP  159 (260)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS
T ss_pred             cCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCC
Confidence            889999999999999999999999999998777799999999888766544

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.86  E-value=5.5e-22  Score=136.71  Aligned_cols=143  Identities=17%  Similarity=0.130  Sum_probs=111.6

Q ss_pred             CccccccCCcEEEEeecChhh-HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecC-CCcch
Q 040927            1 MKRSNQVHYSMGEATTKDEKR-GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL-PDNWY   75 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~-~~~~~   75 (147)
                      +++.|+++|++|++++|+... .+.+.+.+...+. ++.++.||++|+++++++++++.++++++|++   ||. .....
T Consensus        23 ~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~  101 (264)
T 3i4f_A           23 VTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEE-RLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERK  101 (264)
T ss_dssp             HHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGG-GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCC
T ss_pred             HHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCC
Confidence            357889999999999876544 4444445544443 69999999999999999999999999999999   773 22446


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCC-CC-CCcCCC------chhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS-MG-KLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~-~~-~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      ++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||. .+ ..+.++      ++++...|+.  +|++|
T Consensus       102 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  178 (264)
T 3i4f_A          102 KLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTK--TVAYE  178 (264)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            7788999999999999999999999999999998888999999997 33 333322      2345556665  55554

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.86  E-value=1.6e-21  Score=134.34  Aligned_cols=138  Identities=20%  Similarity=0.179  Sum_probs=113.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++..    ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~   98 (260)
T 1nff_A           24 VRAMVAEGAKVVFGDILDEEGKAMAAELAD----AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL-NIGTIE   98 (260)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHTGG----GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHhhc----CceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            567889999999999998887777666532    47889999999999999999999999999999   7766 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++.      +.+...++.  ++++|
T Consensus        99 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  170 (260)
T 1nff_A           99 DYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTK--STALE  170 (260)
T ss_dssp             TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999988777999999999887765543      334445554  44443

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.86  E-value=2.5e-21  Score=133.00  Aligned_cols=135  Identities=13%  Similarity=0.098  Sum_probs=111.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+. +++.+++.     + .++.+|++|+++++++++++.+.+|++|++   ||.. ...++.
T Consensus        23 a~~l~~~G~~V~~~~r~~~~-~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~   94 (256)
T 2d1y_A           23 AQAFAREGALVALCDLRPEG-KEVAEAIG-----G-AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIA-APGSAL   94 (256)
T ss_dssp             HHHHHHTTCEEEEEESSTTH-HHHHHHHT-----C-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTT
T ss_pred             HHHHHHCCCEEEEEeCChhH-HHHHHHhh-----C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            56788999999999999877 66666652     4 778899999999999999999999999999   7766 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++.      +++...++.  ++++|
T Consensus        95 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  166 (256)
T 2d1y_A           95 TVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTR--SLALD  166 (256)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999998878999999999887765543      334445554  44443

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.86  E-value=4.2e-21  Score=131.98  Aligned_cols=126  Identities=24%  Similarity=0.190  Sum_probs=109.8

Q ss_pred             ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++| +.+.++++.+++...+. ++.++.+|++|++++.++++++.+.++++|++   ||.. ...++
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~-~~~~~  101 (261)
T 1gee_A           24 AIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLE-NPVSS  101 (261)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence            5678899999999999 77778888888876664 68899999999999999999999999999999   7765 33566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++
T Consensus       102 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  154 (261)
T 1gee_A          102 HEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL  154 (261)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT
T ss_pred             ccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCC
Confidence            7889999999999999999999999999998876 689999999988776554

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.86  E-value=2.1e-21  Score=134.60  Aligned_cols=140  Identities=13%  Similarity=0.052  Sum_probs=110.6

Q ss_pred             ccccccCCcEEEEeec-ChhhHHHHHHHHHhc-CCCceEEEEecCCCH----HHHHHHHHHHHhhcCCccEE---ecCCC
Q 040927            2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNS-GCDNVIFHLLDVTDP----ASVDSLVHFVSSQFGKLDIL---GGLPD   72 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~----~~~~~~~~~~~~~~g~id~l---ag~~~   72 (147)
                      ++.|+++|++|++++| +.+.++++.+++... +. ++.++.+|++|+    ++++++++++.+.+|++|++   ||...
T Consensus        28 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~  106 (276)
T 1mxh_A           28 AVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG-SAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYY  106 (276)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCC-ceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence            5678899999999999 888888888888765 43 688999999999    99999999999999999999   77653


Q ss_pred             cchhhhcccH-----------HHHHHhHHHhhhhHHHHHHHHHHhhccCCC------CeEEEEcCCCCCCcCCCc-----
Q 040927           73 NWYKMLTQTY-----------ELAEKCIQTNYYGNKRMCEALIPLLQLSDS------PRIVNASSSMGKLKNITN-----  130 (147)
Q Consensus        73 ~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~~iv~isS~~~~~~~~~~-----  130 (147)
                       ..++.+.+.           ++|++.+++|+.+++++++.++|.|. ++.      |+||++||..+..+.++.     
T Consensus       107 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  184 (276)
T 1mxh_A          107 -PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTM  184 (276)
T ss_dssp             -CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEEECCGGGGSCCTTCHHHHH
T ss_pred             -CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEEEECchhhcCCCCCCeehHH
Confidence             356667777           99999999999999999999999998 554      899999999888765543     


Q ss_pred             -hhhhccccchhhhhcc
Q 040927          131 -EWAKGVLSDWMRCRRS  146 (147)
Q Consensus       131 -~~~~~~~~~~~al~~e  146 (147)
                       +++...|+.  ++++|
T Consensus       185 sK~a~~~l~~--~la~e  199 (276)
T 1mxh_A          185 AKHALGGLTR--AAALE  199 (276)
T ss_dssp             HHHHHHHHHH--HHHHH
T ss_pred             HHHHHHHHHH--HHHHH
Confidence             344555555  45443

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.86  E-value=2.2e-21  Score=135.02  Aligned_cols=138  Identities=18%  Similarity=0.067  Sum_probs=111.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh-
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM-   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~-   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. ++.++.+|++|+++++++++++.+++|++|++   ||......++ 
T Consensus        22 a~~la~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~   97 (281)
T 3zv4_A           22 VDRFVAEGARVAVLDKSAERLRELEVAH---GG-NAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALA   97 (281)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHT---BT-TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGG
T ss_pred             HHHHHHCcCEEEEEeCCHHHHHHHHHHc---CC-cEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccc
Confidence            5788999999999999988877765553   33 68999999999999999999999999999999   7764322222 


Q ss_pred             ---hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 ---LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                         .+.+.++|++.+++|+.+++++++.++|+|.+++ |+||++||..+..+.++.      +++...++.  +|++|
T Consensus        98 ~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  172 (281)
T 3zv4_A           98 DLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVR--QMAFE  172 (281)
T ss_dssp             GSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence               2445678999999999999999999999998754 899999999988776543      345566666  55554

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.85  E-value=4.9e-21  Score=133.43  Aligned_cols=140  Identities=15%  Similarity=0.061  Sum_probs=111.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---ch
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---WY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~~   75 (147)
                      ++.|+++|++|++++|+.+ .++..+++....+ ++.++.+|++|+++++++++++.+++|++|++   ||....   ..
T Consensus        40 a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~  117 (285)
T 2p91_A           40 AKSFHREGAQLAFTYATPK-LEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKG  117 (285)
T ss_dssp             HHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSS
T ss_pred             HHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCC
Confidence            5678899999999999875 5555666655433 37789999999999999999999999999999   776532   24


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ++.+.+.++|++.+++|+.|++++++.++|.|.++ +|+||++||..+..+.++.      +.+...++.  ++++|
T Consensus       118 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  191 (285)
T 2p91_A          118 GVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVR--YLAYD  191 (285)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHH--HHHHH
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHHHHHHHHHHHHH--HHHHH
Confidence            67788999999999999999999999999999764 5899999998887665443      345555555  45443

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.85  E-value=4.7e-21  Score=133.23  Aligned_cols=140  Identities=10%  Similarity=-0.043  Sum_probs=113.0

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---c
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---W   74 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~   74 (147)
                      +++.|+++|++|++++|+.  .++..+++....+ ++.++.||++|+++++++++++.+.++++|++   ||....   .
T Consensus        44 ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~  120 (280)
T 3nrc_A           44 IAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN-PAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLE  120 (280)
T ss_dssp             HHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC-CSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSS
T ss_pred             HHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccC
Confidence            3578899999999999987  3455566655554 58899999999999999999999999999999   776532   1


Q ss_pred             hhhhc-ccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           75 YKMLT-QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .++.+ .+.++|++.+++|+.+++++++.++|.|.++ .|+||++||.++..+.++.      +.+...|..  +|++|
T Consensus       121 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~--~la~e  196 (280)
T 3nrc_A          121 GNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPSYNTMGVAKASLEATVR--YTALA  196 (280)
T ss_dssp             SCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHH--HHHHH
T ss_pred             CccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCCchhhHHHHHHHHHHHH--HHHHH
Confidence            44555 8999999999999999999999999999876 5999999999988776543      345556665  55554

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.85  E-value=3e-21  Score=134.52  Aligned_cols=141  Identities=16%  Similarity=0.133  Sum_probs=116.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   ||.. ...++.
T Consensus        61 a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~  138 (285)
T 2c07_A           61 AKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGIT-RDNLFL  138 (285)
T ss_dssp             HHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCC-CCCCTT
T ss_pred             HHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCchh
Confidence            567889999999999998888888888877665 68899999999999999999999999999999   7766 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.++.      +.+...|..  ++++|
T Consensus       139 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  210 (285)
T 2c07_A          139 RMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTK--SLAKE  210 (285)
T ss_dssp             TCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999987777899999998876654433      334445555  44443

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.85  E-value=2e-21  Score=134.83  Aligned_cols=124  Identities=15%  Similarity=0.152  Sum_probs=106.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+..+++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   ||......++.
T Consensus        51 a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~  129 (279)
T 3ctm_A           51 AEAYAQAGADVAIWYNSHPADEKAEHLQKTYGV-HSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEI  129 (279)
T ss_dssp             HHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCS-CEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CC
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCccc
Confidence            567888999999999998777777777766554 68899999999999999999999999999999   77653324555


Q ss_pred             -cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           79 -TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        79 -~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                       +.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+
T Consensus       130 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  178 (279)
T 3ctm_A          130 DVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV  178 (279)
T ss_dssp             CSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC
Confidence             778899999999999999999999999998877799999999988766

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.85  E-value=2e-21  Score=132.38  Aligned_cols=126  Identities=17%  Similarity=0.191  Sum_probs=108.9

Q ss_pred             ccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|+++ .|+.+..+++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   ||.. ...++
T Consensus        18 a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~-~~~~~   95 (244)
T 1edo_A           18 ALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGIT-RDTLL   95 (244)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCcCc
Confidence            56788999999984 8888888888888876665 68899999999999999999999999999999   7765 33667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++
T Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  147 (244)
T 1edo_A           96 IRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG  147 (244)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT
T ss_pred             ccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCC
Confidence            7889999999999999999999999999998777789999999877655443

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.85  E-value=4.3e-21  Score=130.72  Aligned_cols=127  Identities=17%  Similarity=0.122  Sum_probs=111.2

Q ss_pred             ccccccCCc-------EEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC
Q 040927            2 KRSNQVHYS-------MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP   71 (147)
Q Consensus         2 ~~~l~~~G~-------~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~   71 (147)
                      ++.|+++|+       +|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   ||..
T Consensus        19 a~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~   97 (244)
T 2bd0_A           19 ALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA-LTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVG   97 (244)
T ss_dssp             HHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC-EEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCC
T ss_pred             HHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCC-eeeEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcC
Confidence            567888899       999999999888888888876654 68999999999999999999999999999999   7765


Q ss_pred             CcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927           72 DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN  130 (147)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  130 (147)
                       ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++.
T Consensus        98 -~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  155 (244)
T 2bd0_A           98 -RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHS  155 (244)
T ss_dssp             -CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC
T ss_pred             -CcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCC
Confidence             4467778899999999999999999999999999987777999999999887765543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.85  E-value=1.6e-21  Score=134.37  Aligned_cols=132  Identities=16%  Similarity=0.122  Sum_probs=107.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+..+.          .++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        45 a~~l~~~G~~V~~~~r~~~~~~~----------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~  113 (260)
T 3un1_A           45 VRAYRDRNYRVVATSRSIKPSAD----------PDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVF-LAKPFV  113 (260)
T ss_dssp             HHHHHHTTCEEEEEESSCCCCSS----------TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEeCChhhccc----------CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC-CCCChh
Confidence            56788899999999987653221          158899999999999999999999999999999   7876 346788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC--------chhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT--------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~--------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|.|.+++.|+||++||..+..+.+.        ++++...++.  ++++|
T Consensus       114 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~--~la~e  187 (260)
T 3un1_A          114 EMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTR--SLAME  187 (260)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHHHHHH--HHHHH
Confidence            899999999999999999999999999999988899999999877643222        2445566666  55555

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.85  E-value=2.9e-21  Score=133.95  Aligned_cols=139  Identities=15%  Similarity=0.054  Sum_probs=111.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---ch
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---WY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~~   75 (147)
                      ++.|+++|++|++++|+.+ .++..+++....+ ++.++.+|++|+++++++++++.+++|++|++   ||....   ..
T Consensus        25 a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~  102 (275)
T 2pd4_A           25 AQSCFNQGATLAFTYLNES-LEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEG  102 (275)
T ss_dssp             HHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSS
T ss_pred             HHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCC
Confidence            5678899999999999976 5555566655433 37889999999999999999999999999999   776532   25


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ++.+.+.++|++.+++|+.+++++++.++|.|.+  +|+|||+||..+..+.++.      +.+...++.  ++++|
T Consensus       103 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  175 (275)
T 2pd4_A          103 SLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMGLAKAALESAVR--YLAVD  175 (275)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhhHHHHHHHHHHHH--HHHHH
Confidence            6778899999999999999999999999999975  4899999998887765443      344555555  45443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.85  E-value=5.9e-22  Score=150.31  Aligned_cols=138  Identities=18%  Similarity=0.149  Sum_probs=113.8

Q ss_pred             ccccccCCcEEEEeecCh---------hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ec
Q 040927            2 KRSNQVHYSMGEATTKDE---------KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GG   69 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag   69 (147)
                      ++.|+++|++|++++|+.         +.++++.+++...++ +.   .+|++|.++++++++++.+++|++|++   ||
T Consensus        25 A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~-~~---~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAG  100 (604)
T 2et6_A           25 SLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG-VA---VADYNNVLDGDKIVETAVKNFGTVHVIINNAG  100 (604)
T ss_dssp             HHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTC-EE---EEECCCTTCHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCC-eE---EEEcCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            567899999999998764         667778888876654 33   368899888999999999999999999   88


Q ss_pred             CCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhh
Q 040927           70 LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRC  143 (147)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al  143 (147)
                      +. ...++.+++.++|++++++|+.|+++++|+++|+|++++.|+|||+||.++..+.+..      |+++..|+.  +|
T Consensus       101 i~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~--~l  177 (604)
T 2et6_A          101 IL-RDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAE--TL  177 (604)
T ss_dssp             CC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHH--HH
T ss_pred             CC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHHHHHHHHHHHHH--HH
Confidence            76 3467888999999999999999999999999999998878999999999887765443      456777777  66


Q ss_pred             hcc
Q 040927          144 RRS  146 (147)
Q Consensus       144 ~~e  146 (147)
                      +.|
T Consensus       178 a~E  180 (604)
T 2et6_A          178 AKE  180 (604)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            665

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.85  E-value=2.6e-21  Score=133.68  Aligned_cols=142  Identities=13%  Similarity=0.056  Sum_probs=117.0

Q ss_pred             CccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            1 MKRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++.|+++|++|++. .|+.+.+++..+++...+. ++.++.+|++|+++++++++++.++++++|++   ||.. ...+
T Consensus        42 la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~-~~~~  119 (267)
T 4iiu_A           42 IARQLAADGFNIGVHYHRDAAGAQETLNAIVANGG-NGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIA-RDAA  119 (267)
T ss_dssp             HHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCC-CCCC
T ss_pred             HHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCC-CCCc
Confidence            357889999998665 5777888888888887775 69999999999999999999999999999999   7776 3467


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhc-cCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQ-LSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.+.++|++.+++|+.+++.+++.++|.|. +.+.|+||++||.++..+.++.      +.+...|+.  ++++|
T Consensus       120 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  194 (267)
T 4iiu_A          120 FPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATK--ALAIE  194 (267)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            77899999999999999999999999999886 5567899999998877665443      345555555  55544

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.85  E-value=1.8e-21  Score=134.72  Aligned_cols=131  Identities=19%  Similarity=0.175  Sum_probs=107.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+..          .. ....+.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        31 a~~l~~~G~~V~~~~r~~~~~----------~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~   98 (269)
T 3vtz_A           31 VDALVRYGAKVVSVSLDEKSD----------VN-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIE-QYSPLH   98 (269)
T ss_dssp             HHHHHHTTCEEEEEESCC--C----------TT-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEeCCchhc----------cC-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcc
Confidence            567888899999888876532          11 46788999999999999999999999999999   7776 346788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++.      +++...++.  ++++|
T Consensus        99 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  170 (269)
T 3vtz_A           99 LTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTR--SVAID  170 (269)
T ss_dssp             GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999998888999999999988775543      345556665  55544

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.85  E-value=2.5e-21  Score=134.54  Aligned_cols=138  Identities=21%  Similarity=0.167  Sum_probs=115.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        22 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~   96 (281)
T 3m1a_A           22 AEAAVAAGDTVIGTARRTEALDDLVAAY---PD-RAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRT-QVGAFE   96 (281)
T ss_dssp             HHHHHHTTCEEEEEESSGGGGHHHHHHC---TT-TEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCE-EECCTT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHhc---cC-CceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcC-CCCChh
Confidence            5678899999999999988877765543   33 68999999999999999999999999999999   7765 446777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|.|++++.|+||++||..+..+.++..      ++.+.++.  ++++|
T Consensus        97 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  168 (281)
T 3m1a_A           97 ETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSE--GLADE  168 (281)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            88999999999999999999999999999988789999999999887765543      44555555  45443

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.85  E-value=5.5e-21  Score=131.73  Aligned_cols=138  Identities=21%  Similarity=0.109  Sum_probs=112.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++..    ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        29 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~  103 (263)
T 3ak4_A           29 ARALDKAGATVAIADLDVMAAQAVVAGLEN----GGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVS-TMRPAV  103 (263)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHTCTT----CCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHhc----CCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCChh
Confidence            567889999999999998777766555432    47889999999999999999999999999999   7765 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..+..+.++.      +++...++.  ++++|
T Consensus       104 ~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  176 (263)
T 3ak4_A          104 DITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQ--ALARE  176 (263)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            889999999999999999999999999998776 6999999999887765443      334445555  44443

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.85  E-value=6.3e-21  Score=130.28  Aligned_cols=126  Identities=20%  Similarity=0.178  Sum_probs=108.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHH-HhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh-
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKL-KNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK-   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~-   76 (147)
                      ++.|+++|++|++++|+.+.++++.+++ ...+. ++.++.+|++|+++++++++++.++++++|++   ||... ..+ 
T Consensus        19 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~   96 (250)
T 2cfc_A           19 ATRFLARGDRVAALDLSAETLEETARTHWHAYAD-KVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITG-NSEA   96 (250)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGG-GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CTTC
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCCc
Confidence            5678899999999999998888887777 43343 68899999999999999999999999999999   77652 234 


Q ss_pred             --hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           77 --MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        77 --~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                        +.+.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.++
T Consensus        97 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  151 (250)
T 2cfc_A           97 GVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPG  151 (250)
T ss_dssp             CSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             chhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC
Confidence              77889999999999999999999999999998877789999999888766544

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.84  E-value=8.2e-21  Score=130.91  Aligned_cols=126  Identities=25%  Similarity=0.179  Sum_probs=100.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc-CCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.+ +++|++   ||.. ...++
T Consensus        31 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~-~~~~~  108 (266)
T 1xq1_A           31 VEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI-RSKPT  108 (266)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC-------
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCC-CCCCh
Confidence            567889999999999999888888888877665 58899999999999999999999999 899999   7765 34667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|++.+.++||++||..+..+.++
T Consensus       109 ~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  160 (266)
T 1xq1_A          109 LDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV  160 (266)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------
T ss_pred             hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCC
Confidence            7889999999999999999999999999998877799999999988765443

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.84  E-value=6.3e-21  Score=131.71  Aligned_cols=140  Identities=15%  Similarity=0.070  Sum_probs=110.9

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc---
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW---   74 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~---   74 (147)
                      +++.|+++|++|++++|+... .+..+++....+ ++.++.||++|+++++++++++.+++|++|++   ||.....   
T Consensus        32 ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~  109 (271)
T 3ek2_A           32 IAKACKREGAELAFTYVGDRF-KDRITEFAAEFG-SELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIA  109 (271)
T ss_dssp             HHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGS
T ss_pred             HHHHHHHcCCCEEEEecchhh-HHHHHHHHHHcC-CcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccc
Confidence            357789999999999998543 344455544444 48899999999999999999999999999999   7765331   


Q ss_pred             hhhhc-ccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           75 YKMLT-QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .++.+ .+.++|++.+++|+.+++++++.++|.|++  +|+||++||.++..+.++.      +++...|+.  ++++|
T Consensus       110 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  184 (271)
T 3ek2_A          110 GDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNYNTMGLAKAALEASVR--YLAVS  184 (271)
T ss_dssp             SCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHH--HHHHH
T ss_pred             CccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCCCccchhHHHHHHHHHHH--HHHHH
Confidence            44445 899999999999999999999999999975  4899999999888776543      345566666  55554

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.84  E-value=6.3e-21  Score=129.86  Aligned_cols=126  Identities=18%  Similarity=0.174  Sum_probs=108.6

Q ss_pred             ccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEE-EEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIF-HLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|+++ +|+.+.++++.+++...+. ++.. +.+|++|+++++++++++.+.++++|++   ||.. ...+
T Consensus        18 a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~-~~~~   95 (245)
T 2ph3_A           18 ALRLAEDGFALAIHYGQNREKAEEVAEEARRRGS-PLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGIT-RDTL   95 (245)
T ss_dssp             HHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTC-SCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCC-CCBC
T ss_pred             HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCC
Confidence            56788999999998 8998888888888877664 4666 8999999999999999999999999999   7765 3466


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.++
T Consensus        96 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  148 (245)
T 2ph3_A           96 LVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPG  148 (245)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSS
T ss_pred             cccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCC
Confidence            77889999999999999999999999999998877789999999877655443

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.84  E-value=2.5e-21  Score=134.84  Aligned_cols=119  Identities=17%  Similarity=0.154  Sum_probs=102.2

Q ss_pred             ccccccCCcEEEEeecC------------hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--
Q 040927            2 KRSNQVHYSMGEATTKD------------EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--   67 (147)
                      ++.|+++|++|++++|+            .+.+++...++...+. ++.++.+|++|+++++++++++.+++|++|++  
T Consensus        27 a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~  105 (287)
T 3pxx_A           27 AVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVA  105 (287)
T ss_dssp             HHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             HHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57889999999999987            6677777777777665 69999999999999999999999999999999  


Q ss_pred             -ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           68 -GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        68 -ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                       ||.... . . +.+.++|++.+++|+.+++++++.++|+|.  ++|+||++||..+..+
T Consensus       106 nAg~~~~-~-~-~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~  160 (287)
T 3pxx_A          106 NAGICPL-G-A-HLPVQAFADAFDVDFVGVINTVHAALPYLT--SGASIITTGSVAGLIA  160 (287)
T ss_dssp             CCCCCCC-C-T-TCCTHHHHHHHHHHTHHHHHHHHHHGGGCC--TTCEEEEECCHHHHHH
T ss_pred             CCCcCcc-c-C-cCCHHHHHHHhhhhhhhhHHHHHHHHHHhh--cCcEEEEeccchhccc
Confidence             776633 2 2 378899999999999999999999999993  3589999999887654

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.84  E-value=4.3e-21  Score=132.43  Aligned_cols=139  Identities=14%  Similarity=0.024  Sum_probs=109.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---ch
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---WY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~~   75 (147)
                      ++.|+++|++|++++|+. ..++..+++....+ ...++.+|++|+++++++++++.+++|++|++   ||....   ..
T Consensus        28 a~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~  105 (265)
T 1qsg_A           28 AQAMHREGAELAFTYQND-KLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDG  105 (265)
T ss_dssp             HHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSS
T ss_pred             HHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC-CcEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCC
Confidence            567889999999999987 45555566654433 35788999999999999999999999999999   776532   24


Q ss_pred             hhhc-ccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           76 KMLT-QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ++.+ .+.++|++.+++|+.+++++++.++|.|.+  +|+||++||..+..+.++.      +.+...++.  ++++|
T Consensus       106 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  179 (265)
T 1qsg_A          106 DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVR--YMANA  179 (265)
T ss_dssp             CHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHH--HHHHH
T ss_pred             CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            5667 899999999999999999999999999975  4899999998887665433      344555555  44443

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.84  E-value=4.3e-21  Score=132.17  Aligned_cols=139  Identities=16%  Similarity=0.054  Sum_probs=110.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---ch
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---WY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~~   75 (147)
                      ++.|+++|++|++++|+.+ .++..+++....+ .+.++.+|++|+++++++++++.+++|++|++   ||....   ..
T Consensus        27 a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~  104 (261)
T 2wyu_A           27 AAKLKEAGAEVALSYQAER-LRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEG  104 (261)
T ss_dssp             HHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSS
T ss_pred             HHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCC
Confidence            5678899999999999875 4555556654433 37889999999999999999999999999999   776532   24


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ++.+.+.++|++.+++|+.+++++++.++|.|.+  +|+||++||..+..+.++.      +++...++.  ++++|
T Consensus       105 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  177 (261)
T 2wyu_A          105 RYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVR--YLAYE  177 (261)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            6778899999999999999999999999999975  4899999998887765443      344555555  44443

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=1.9e-20  Score=130.08  Aligned_cols=122  Identities=15%  Similarity=0.093  Sum_probs=106.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. .++.++.+|++|+++++++++++.+.++++|++   ||.. ...++
T Consensus        49 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~-~~~~~  127 (279)
T 1xg5_A           49 ARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA-RPDTL  127 (279)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCC-CCCCT
T ss_pred             HHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECCCCC-CCCCc
Confidence            567889999999999999888888888876652 257889999999999999999999999999999   7765 34667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC--CeEEEEcCCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS--PRIVNASSSMGK  124 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~iv~isS~~~~  124 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|++.+.  ++||++||..+.
T Consensus       128 ~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  176 (279)
T 1xg5_A          128 LSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH  176 (279)
T ss_dssp             TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGT
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhc
Confidence            78899999999999999999999999999987763  899999998876

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=3.8e-21  Score=133.11  Aligned_cols=137  Identities=22%  Similarity=0.238  Sum_probs=111.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++.     ++.++.+|++|+++++++++++.+++|++|++   ||......++.
T Consensus        26 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~  100 (270)
T 1yde_A           26 VRAFVNSGARVVICDKDESGGRALEQELP-----GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPE  100 (270)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHCT-----TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcc
Confidence            56788999999999999887776655542     37889999999999999999999999999999   77654446777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|+|.++ .|+||++||..+..+.+.      ++++...++.  ++++|
T Consensus       101 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  171 (270)
T 1yde_A          101 ETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTK--ALALD  171 (270)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHHHHHHHHH--HHHHH
Confidence            88999999999999999999999999999765 489999999877655443      2345555555  44443

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.84  E-value=3.4e-21  Score=131.43  Aligned_cols=126  Identities=22%  Similarity=0.236  Sum_probs=91.8

Q ss_pred             ccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|+++ .|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   ||.. ...++
T Consensus        22 a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~-~~~~~   99 (247)
T 2hq1_A           22 AWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI-NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGIT-RDTLM   99 (247)
T ss_dssp             HHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTC-CEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC---------
T ss_pred             HHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCcc
Confidence            56788999999998 6777777878788876664 68999999999999999999999999999999   7765 33566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++
T Consensus       100 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  151 (247)
T 2hq1_A          100 LKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAG  151 (247)
T ss_dssp             -------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC
Confidence            6788899999999999999999999999998777789999999887766543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.84  E-value=3.8e-21  Score=131.18  Aligned_cols=125  Identities=19%  Similarity=0.143  Sum_probs=107.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHh-cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKN-SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++.. .+. ++.++.+|++|+++++++++++.+.++++|++   ||.. ...++
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~-~~~~~  101 (248)
T 2pnf_A           24 AEKLASAGSTVIITGTSGERAKAVAEEIANKYGV-KAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGIT-RDKLF  101 (248)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC-ceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCcc
Confidence            567889999999999998888888777765 343 58899999999999999999999999999999   7765 33566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.+
T Consensus       102 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  152 (248)
T 2pnf_A          102 LRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV  152 (248)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCC
Confidence            788999999999999999999999999999887778999999987655543

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.84  E-value=2.2e-20  Score=127.68  Aligned_cols=125  Identities=17%  Similarity=0.087  Sum_probs=108.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++... . ++.++.+|++|+++++++++.+.+.++++|++   ||.. ...++.
T Consensus        23 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~   99 (251)
T 1zk4_A           23 ATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-D-QIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIA-VNKSVE   99 (251)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-T-TEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCC-CCCCTT
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-C-ceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChh
Confidence            5678899999999999988888777777543 2 58899999999999999999999999999999   7765 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC-CeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS-PRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|.+++. ++||++||..+..+.++
T Consensus       100 ~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  151 (251)
T 1zk4_A          100 ETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS  151 (251)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT
T ss_pred             hCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCC
Confidence            8899999999999999999999999999988776 79999999988766544

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.84  E-value=2.4e-20  Score=126.34  Aligned_cols=123  Identities=23%  Similarity=0.140  Sum_probs=106.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++.     ++.++.+|++|+++++++++.+.+.++++|++   ||.. ...++.
T Consensus        22 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~   95 (234)
T 2ehd_A           22 ARLLHAKGYRVGLMARDEKRLQALAAELE-----GALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVG-VMKPVH   95 (234)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCSCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHhh-----hceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcc
Confidence            56788999999999999887776655542     47889999999999999999999999999999   7765 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN  130 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  130 (147)
                      +.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.++.
T Consensus        96 ~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  147 (234)
T 2ehd_A           96 ELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGG  147 (234)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTC
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCC
Confidence            8899999999999999999999999999998878999999999887765443

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.84  E-value=2.4e-20  Score=127.69  Aligned_cols=125  Identities=16%  Similarity=0.190  Sum_probs=108.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   ||.... .++ 
T Consensus        28 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~-~~~-  104 (255)
T 1fmc_A           28 AITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGP-KPF-  104 (255)
T ss_dssp             HHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCC-CCT-
T ss_pred             HHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC-CCC-
Confidence            567889999999999999888888888877665 68899999999999999999999999999999   776532 444 


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+.+.++||++||..+..+.++
T Consensus       105 ~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  155 (255)
T 1fmc_A          105 DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN  155 (255)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT
T ss_pred             CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC
Confidence            678899999999999999999999999998877789999999887766544

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.84  E-value=1.4e-20  Score=129.83  Aligned_cols=130  Identities=18%  Similarity=0.190  Sum_probs=106.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.           +. ++.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        25 a~~l~~~G~~V~~~~r~~~~-----------~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~   91 (264)
T 2dtx_A           25 AERFVDEGSKVIDLSIHDPG-----------EA-KYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIE-SYGKIE   91 (264)
T ss_dssp             HHHHHHTTCEEEEEESSCCC-----------SC-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTT
T ss_pred             HHHHHHCCCEEEEEecCccc-----------CC-ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcc
Confidence            56677888888888887643           22 57889999999999999999999999999999   7766 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||.++..+.++.      +.+...|+.  ++++|
T Consensus        92 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  163 (264)
T 2dtx_A           92 SMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTK--SIALD  163 (264)
T ss_dssp             TSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999998878999999999887765543      344555555  45443

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.83  E-value=5e-21  Score=131.75  Aligned_cols=125  Identities=17%  Similarity=0.124  Sum_probs=104.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+..++..+++....+.++.++.+|++|+++++++++++.+.++++|++   ||.. ...++.
T Consensus        31 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~  109 (265)
T 1h5q_A           31 TRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVS-VVKPAT  109 (265)
T ss_dssp             HHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCC-CCSCGG
T ss_pred             HHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcC-CCCchh
Confidence            567889999999999977666666666644322368899999999999999999999999999998   7765 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKN  127 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~  127 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.
T Consensus       110 ~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  159 (265)
T 1h5q_A          110 ELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN  159 (265)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC
T ss_pred             hCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccc
Confidence            889999999999999999999999999998654 4899999998876553

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.83  E-value=7.2e-21  Score=130.75  Aligned_cols=135  Identities=17%  Similarity=0.101  Sum_probs=104.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc---h
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW---Y   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~---~   75 (147)
                      ++.|+++|++|++++|+.+..   .+++   +. ++.++.+|++|+++++++++.+.+ +|++|++   ||.....   .
T Consensus        26 a~~l~~~G~~V~~~~r~~~~~---~~~~---~~-~~~~~~~D~~~~~~v~~~~~~~~~-~g~id~lv~nAg~~~~~~~~~   97 (257)
T 3tl3_A           26 TKRLLDAGAQVVVLDIRGEDV---VADL---GD-RARFAAADVTDEAAVASALDLAET-MGTLRIVVNCAGTGNAIRVLS   97 (257)
T ss_dssp             HHHHHHHTCEEEEEESSCHHH---HHHT---CT-TEEEEECCTTCHHHHHHHHHHHHH-HSCEEEEEECGGGSHHHHHHH
T ss_pred             HHHHHHCCCEEEEEeCchHHH---HHhc---CC-ceEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCccccc
Confidence            577899999999999965432   2222   33 689999999999999999998877 8999999   7765221   1


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhcc--------CCCCeEEEEcCCCCCCcCCC------chhhhccccchh
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQL--------SDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWM  141 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--------~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~  141 (147)
                      +..+.+.++|++.+++|+.+++++++.++|+|.+        +++|+|||+||..+..+.++      ++++...|+.  
T Consensus        98 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--  175 (257)
T 3tl3_A           98 RDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTL--  175 (257)
T ss_dssp             HTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHHHHHHHHHHHH--
T ss_pred             ccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHHHHHHHHHHHHH--
Confidence            2224889999999999999999999999999988        56789999999998876443      3455666666  


Q ss_pred             hhhcc
Q 040927          142 RCRRS  146 (147)
Q Consensus       142 al~~e  146 (147)
                      +|++|
T Consensus       176 ~la~e  180 (257)
T 3tl3_A          176 PIARD  180 (257)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55554

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.83  E-value=3.3e-21  Score=146.26  Aligned_cols=137  Identities=16%  Similarity=0.143  Sum_probs=110.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++++  .++++.+++...++ ++..+.+|++  ++.+++++++.+++|++|++   ||+. ...++.
T Consensus       339 A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g~-~~~~~~~Dv~--~~~~~~~~~~~~~~G~iDiLVnNAGi~-~~~~~~  412 (604)
T 2et6_A          339 AKWFAKYGAKVVVNDFK--DATKTVDEIKAAGG-EAWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGIL-RDRSFA  412 (604)
T ss_dssp             HHHHHHTTCEEEEECSS--CCHHHHHHHHHTTC-EEEEECCCHH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTT
T ss_pred             HHHHHHCCCEEEEEeCc--cHHHHHHHHHhcCC-eEEEEEcChH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChh
Confidence            57789999999999864  24556677766664 5777788883  45677899999999999999   8876 346788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++.+++|+.|++++++.++|+|+++++|+|||+||.++..+.+..      |+++..|+.  +|+.|
T Consensus       413 ~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~--~la~E  484 (604)
T 2et6_A          413 KMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSK--TMAIE  484 (604)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHHHH--HHHHH
Confidence            9999999999999999999999999999998878999999999887765543      456667776  66655

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.83  E-value=3.1e-20  Score=128.66  Aligned_cols=125  Identities=18%  Similarity=0.171  Sum_probs=106.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc-chhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN-WYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~-~~~~   77 (147)
                      ++.|+++|++|++++|+.+..+++.+++...+  ++.++.+|++|+++++++++++.+.++++|++   ||.... ..++
T Consensus        33 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~  110 (278)
T 2bgk_A           33 AKLFVRYGAKVVIADIADDHGQKVCNNIGSPD--VISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSI  110 (278)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT--TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSST
T ss_pred             HHHHHHCCCEEEEEcCChhHHHHHHHHhCCCC--ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCCh
Confidence            56788999999999999877777766664322  58899999999999999999999999999999   775422 3566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+
T Consensus       111 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~  161 (278)
T 2bgk_A          111 LEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE  161 (278)
T ss_dssp             TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT
T ss_pred             hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC
Confidence            788999999999999999999999999999987779999999988876654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.83  E-value=3.1e-20  Score=129.39  Aligned_cols=140  Identities=16%  Similarity=0.158  Sum_probs=113.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---e-cCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---G-GLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---a-g~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+..++.++.+|++|+++++++++++.+.+|++|++   + |.. . .++
T Consensus        45 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li~naag~~-~-~~~  122 (286)
T 1xu9_A           45 AYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNT-S-LNL  122 (286)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCC-C-CCC
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCC-C-Ccc
Confidence            567889999999999999988888888877664468899999999999999999999999999999   3 433 2 244


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.|++.+++.++|.|.+. .|+||++||.++..+.++.      +.+...|+.  ++++|
T Consensus       123 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~l~~e  194 (286)
T 1xu9_A          123 FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFS--SIRKE  194 (286)
T ss_dssp             CCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHHHHHHHHHHHH--HHHHH
Confidence            456889999999999999999999999998764 4899999999988775543      334455555  55544

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.83  E-value=9.5e-21  Score=130.34  Aligned_cols=128  Identities=20%  Similarity=0.186  Sum_probs=105.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcC------CCceEEEEecCCCHHHHHHHHHHHHhhcCCc-cEE---ecCC
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG------CDNVIFHLLDVTDPASVDSLVHFVSSQFGKL-DIL---GGLP   71 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i-d~l---ag~~   71 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+      ..++.++.+|++|+++++++++.+.+.+|++ |++   ||..
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~  103 (264)
T 2pd6_A           24 SVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGIT  103 (264)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCC
T ss_pred             HHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence            56788999999999999888877776665443      0258899999999999999999999999998 999   7766


Q ss_pred             CcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc
Q 040927           72 DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN  130 (147)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~  130 (147)
                       ...++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..+..+.++.
T Consensus       104 -~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  162 (264)
T 2pd6_A          104 -QDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQ  162 (264)
T ss_dssp             -CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTB
T ss_pred             -CCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCC
Confidence             346677889999999999999999999999999998765 6899999998776655443

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.83  E-value=1.9e-21  Score=133.47  Aligned_cols=130  Identities=16%  Similarity=0.129  Sum_probs=101.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++            .+.++.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        38 a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~  104 (253)
T 2nm0_A           38 ARAFADAGDKVAITYRSGEPPE------------GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVT-KDQLLM  104 (253)
T ss_dssp             HHHHHHTTCEEEEEESSSCCCT------------TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCC-TTTC--
T ss_pred             HHHHHHCCCEEEEEeCChHhhc------------cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            4667788888888888764321            26788999999999999999999999999999   7765 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.++      ++.+...|..  ++++|
T Consensus       105 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  176 (253)
T 2nm0_A          105 RMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFAR--SLARE  176 (253)
T ss_dssp             -CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHH--HHHHH
Confidence            788899999999999999999999999998877799999999988766433      2344555555  45444

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.83  E-value=2.6e-20  Score=127.48  Aligned_cols=123  Identities=18%  Similarity=0.122  Sum_probs=105.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCce-EEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNV-IFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. ++ .++.+|++|+++++++++++.+ ++++|++   ||.. ...++
T Consensus        28 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~~~~~-~~~id~li~~Ag~~-~~~~~  101 (254)
T 2wsb_A           28 CRAFAASGARLILIDREAAALDRAAQEL---GA-AVAARIVADVTDAEAMTAAAAEAEA-VAPVSILVNSAGIA-RLHDA  101 (254)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHH---GG-GEEEEEECCTTCHHHHHHHHHHHHH-HSCCCEEEECCCCC-CCBCS
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHh---cc-cceeEEEEecCCHHHHHHHHHHHHh-hCCCcEEEECCccC-CCCCc
Confidence            5678899999999999988887777766   22 46 8899999999999999999988 8999999   7765 33566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN  130 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  130 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+..
T Consensus       102 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  154 (254)
T 2wsb_A          102 LETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQ  154 (254)
T ss_dssp             TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCC
Confidence            78889999999999999999999999999988777999999998877655443

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.83  E-value=2.2e-20  Score=128.57  Aligned_cols=123  Identities=20%  Similarity=0.237  Sum_probs=103.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. ++.++.+|++|+++++++++++.+.++++|++   ||.... .++.
T Consensus        29 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~-~~~~  103 (265)
T 2o23_A           29 AERLVGQGASAVLLDLPNSGGEAQAKKL---GN-NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVA-SKTY  103 (265)
T ss_dssp             HHHHHHTTCEEEEEECTTSSHHHHHHHH---CT-TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-CCSE
T ss_pred             HHHHHHCCCEEEEEeCCcHhHHHHHHHh---CC-ceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCCC-Cccc
Confidence            5678899999999999988877777666   33 58999999999999999999999999999999   776533 2222


Q ss_pred             ------cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC------CCCeEEEEcCCCCCCcCCC
Q 040927           79 ------TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS------DSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~~~~  129 (147)
                            +.+.++|++.+++|+.+++.+++.++|.|.++      +.++||++||..+..+.++
T Consensus       104 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  166 (265)
T 2o23_A          104 NLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG  166 (265)
T ss_dssp             ETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT
T ss_pred             cccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCC
Confidence                  37889999999999999999999999999887      5689999999887666543

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.83  E-value=1.5e-20  Score=129.05  Aligned_cols=136  Identities=10%  Similarity=-0.008  Sum_probs=108.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+ +...+. ++..+     |+++++++++++.+.+|++|++   ||......++.
T Consensus        18 a~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~-~~~~~-----d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~   90 (254)
T 1zmt_A           18 ALRLSEAGHTVACHDESFKQKDELEA-FAETYP-QLKPM-----SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPID   90 (254)
T ss_dssp             HHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCT-TSEEC-----CCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCC-cEEEE-----CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCChh
Confidence            56788999999999999887777655 665554 45443     6778999999999999999999   77652346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++.      +.+...|+.  ++++|
T Consensus        91 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  162 (254)
T 1zmt_A           91 KYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLAN--ALSKE  162 (254)
T ss_dssp             GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999988777999999999988775443      344555555  45444

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.83  E-value=4.2e-20  Score=128.41  Aligned_cols=139  Identities=17%  Similarity=0.081  Sum_probs=111.2

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++   +. ++.++.+|++|+++++++++.+ ++++++|++   ++......++
T Consensus        46 ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~-~~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~lv~~aag~~~~~~~  120 (281)
T 3ppi_A           46 TVRRLHADGLGVVIADLAAEKGKALADEL---GN-RAEFVSTNVTSEDSVLAAIEAA-NQLGRLRYAVVAHGGFGVAQRI  120 (281)
T ss_dssp             HHHHHHHTTCEEEEEESCHHHHHHHHHHH---CT-TEEEEECCTTCHHHHHHHHHHH-TTSSEEEEEEECCCCCCCCCCS
T ss_pred             HHHHHHHCCCEEEEEeCChHHHHHHHHHh---CC-ceEEEEcCCCCHHHHHHHHHHH-HHhCCCCeEEEccCcccccccc
Confidence            35778999999999999998888887777   33 6899999999999999999999 788999998   2322122222


Q ss_pred             -----hcccHHHHHHhHHHhhhhHHHHHHHHHHhhcc------CCCCeEEEEcCCCCCCcCCCc------hhhhccccch
Q 040927           78 -----LTQTYELAEKCIQTNYYGNKRMCEALIPLLQL------SDSPRIVNASSSMGKLKNITN------EWAKGVLSDW  140 (147)
Q Consensus        78 -----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~------~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~  140 (147)
                           .+.+.++|++.+++|+.+++++++.++|.|.+      .++|+||++||..+..+.++.      +.+...|+. 
T Consensus       121 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~-  199 (281)
T 3ppi_A          121 VQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTI-  199 (281)
T ss_dssp             BCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH-
T ss_pred             cccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCcccHHHHHHHHHHHH-
Confidence                 36788999999999999999999999999976      456899999999988776543      345555555 


Q ss_pred             hhhhcc
Q 040927          141 MRCRRS  146 (147)
Q Consensus       141 ~al~~e  146 (147)
                       +|++|
T Consensus       200 -~la~e  204 (281)
T 3ppi_A          200 -AAARD  204 (281)
T ss_dssp             -HHHHH
T ss_pred             -HHHHH
Confidence             55554

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=5.8e-20  Score=128.86  Aligned_cols=140  Identities=19%  Similarity=0.112  Sum_probs=113.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHh-----cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKN-----SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      ++.|+++|++|++++|+.+.++++.+++..     .+. ++.++.+|++|+++++++++.+.+.+|++|++   ||.. .
T Consensus        35 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~-~  112 (303)
T 1yxm_A           35 VKELLELGSNVVIASRKLERLKSAADELQANLPPTKQA-RVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQ-F  112 (303)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-C
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCc-cEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-C
Confidence            567889999999999999888888888875     233 68999999999999999999999999999999   7755 3


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ..++.+.+.++|++.+++|+.++++++++++|.+.+...++||++||.. ..+.+..      +.+...+++  ++++|
T Consensus       113 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~~sK~a~~~~~~--~la~e  188 (303)
T 1yxm_A          113 LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGAARAGVYNLTK--SLALE  188 (303)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhHHHHHHHHHHHH--HHHHH
Confidence            4567788999999999999999999999999966554468999999987 5554333      234455555  55544

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.82  E-value=1.6e-20  Score=128.66  Aligned_cols=131  Identities=14%  Similarity=0.051  Sum_probs=105.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.        ...   .+..+.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        24 a~~l~~~G~~V~~~~r~~~~--------~~~---~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~   91 (250)
T 2fwm_X           24 ALAFVEAGAKVTGFDQAFTQ--------EQY---PFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGIL-RMGATD   91 (250)
T ss_dssp             HHHHHHTTCEEEEEESCCCS--------SCC---SSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCC-CCCCTT
T ss_pred             HHHHHHCCCEEEEEeCchhh--------hcC---CceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcc
Confidence            56778889999988887641        111   26788899999999999999999999999999   7765 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++.      +++...+..  ++++|
T Consensus        92 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  163 (250)
T 2fwm_X           92 QLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLAL--SVGLE  163 (250)
T ss_dssp             TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999988777999999999888765443      344555555  45443

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.82  E-value=8.9e-21  Score=131.03  Aligned_cols=130  Identities=19%  Similarity=0.153  Sum_probs=102.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++            ....+.+|++|.+++.++++++.+.+|++|++   ||... ..++.
T Consensus        45 a~~la~~G~~V~~~~r~~~~~~------------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~  111 (266)
T 3uxy_A           45 VTALRAAGARVAVADRAVAGIA------------ADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVIS-RGRIT  111 (266)
T ss_dssp             HHHHHHTTCEEEECSSCCTTSC------------CSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHH------------hhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChh
Confidence            4556667777777776643211            12445789999999999999999999999999   78763 47788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.|++++++.++|+|++++.|+||++||..+..+.++..      ++...++.  ++++|
T Consensus       112 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~--~la~e  183 (266)
T 3uxy_A          112 ETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQ--CMGMD  183 (266)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHH--HHHHH
Confidence            89999999999999999999999999999988789999999999987765543      45555555  55544

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.82  E-value=4.7e-20  Score=129.21  Aligned_cols=136  Identities=11%  Similarity=-0.019  Sum_probs=113.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhc-CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++... +. ++.++.+|++|+++++++++.+.+.+|++|++   ||.. ...++
T Consensus        43 a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~-~~~~~  120 (302)
T 1w6u_A           43 TTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGN-FISPT  120 (302)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCC-CCSCG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCcc
Confidence            5678899999999999998888888888765 44 68999999999999999999999999999999   7765 34667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhc-cCCCCeEEEEcCCCCCCcCCCc------hhhhccccc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQ-LSDSPRIVNASSSMGKLKNITN------EWAKGVLSD  139 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~  139 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|. +.+.++||++||..+..+.++.      +.+...++.
T Consensus       121 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  189 (302)
T 1w6u_A          121 ERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSK  189 (302)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHHHHHHHHHH
Confidence            7889999999999999999999999999997 4456899999998776654433      344455554

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.82  E-value=9.2e-21  Score=129.59  Aligned_cols=130  Identities=19%  Similarity=0.121  Sum_probs=96.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+++            ...+.+|++|+++++++++++.+.+|++|++   ||.. ...++.
T Consensus        32 a~~l~~~G~~V~~~~r~~~~~~~------------~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~   98 (247)
T 1uzm_A           32 AQRLAADGHKVAVTHRGSGAPKG------------LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLM   98 (247)
T ss_dssp             HHHHHHTTCEEEEEESSSCCCTT------------SEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCC-C-----
T ss_pred             HHHHHHCCCEEEEEeCChHHHHH------------hcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            45677788888888887643221            2237899999999999999999999999999   7766 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++.      +++...|..  ++++|
T Consensus        99 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  170 (247)
T 1uzm_A           99 RMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMAR--SIARE  170 (247)
T ss_dssp             CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999999999999988877999999999887665443      344555555  55544

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.82  E-value=2.2e-20  Score=127.98  Aligned_cols=123  Identities=14%  Similarity=0.157  Sum_probs=106.6

Q ss_pred             ccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+ .+.++++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   ||......++
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~  102 (258)
T 3afn_B           24 ARLFARAGAKVGLHGRKAPANIDETIASMRADGG-DAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPL  102 (258)
T ss_dssp             HHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCG
T ss_pred             HHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCcc
Confidence            56788999999999999 7888888888877664 68999999999999999999999999999999   7762244667


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--C---CeEEEEcCCCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--S---PRIVNASSSMGKL  125 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~---~~iv~isS~~~~~  125 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|.+.+  .   ++||++||..+..
T Consensus       103 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  155 (258)
T 3afn_B          103 PEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHT  155 (258)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHH
T ss_pred             ccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhcc
Confidence            7889999999999999999999999999997543  2   7999999988765

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.82  E-value=3.3e-20  Score=127.09  Aligned_cols=139  Identities=13%  Similarity=0.117  Sum_probs=114.3

Q ss_pred             ccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcC------CccEE---ecCC
Q 040927            2 KRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG------KLDIL---GGLP   71 (147)
Q Consensus         2 ~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g------~id~l---ag~~   71 (147)
                      ++.|+++|++|+++ .|+.+.+++..+++...+. ++.++.+|++|.++++++++.+.+.++      ++|++   ||..
T Consensus        24 a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~  102 (255)
T 3icc_A           24 AKRLANDGALVAIHYGNRKEEAEETVYEIQSNGG-SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG  102 (255)
T ss_dssp             HHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCC
T ss_pred             HHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCC-ceEEEecCcCCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCC
Confidence            57789999999886 6777888888888887775 689999999999999999999988764      49999   7766


Q ss_pred             CcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhc
Q 040927           72 DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRR  145 (147)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~  145 (147)
                       ...++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||.++..+.+..      +++...|..  ++++
T Consensus       103 -~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~  177 (255)
T 3icc_A          103 -PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYSMTKGAINTMTF--TLAK  177 (255)
T ss_dssp             -CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHH
T ss_pred             -CCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCCcchhHHhHHHHHHHHH--HHHH
Confidence             4467788999999999999999999999999999954  3799999999988776554      345555555  5554


Q ss_pred             c
Q 040927          146 S  146 (147)
Q Consensus       146 e  146 (147)
                      |
T Consensus       178 e  178 (255)
T 3icc_A          178 Q  178 (255)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.82  E-value=3.4e-20  Score=125.47  Aligned_cols=135  Identities=16%  Similarity=0.136  Sum_probs=109.5

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++   +. ++.++.+|++|+++++++++++.+.   .|++   ||.. ...++
T Consensus        17 ~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~v~~~~~~~~~~---~d~lv~~Ag~~-~~~~~   88 (230)
T 3guy_A           17 LAKLYDAEGKATYLTGRSESKLSTVTNCL---SN-NVGYRARDLASHQEVEQLFEQLDSI---PSTVVHSAGSG-YFGLL   88 (230)
T ss_dssp             HHHHHHHTTCCEEEEESCHHHHHHHHHTC---SS-CCCEEECCTTCHHHHHHHHHSCSSC---CSEEEECCCCC-CCSCG
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hh-ccCeEeecCCCHHHHHHHHHHHhhc---CCEEEEeCCcC-CCCcc
Confidence            35778999999999999998887776665   33 5889999999999999998877554   3888   7766 45778


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.+++ ++||++||..+..+.++.      +++...|..  ++++|
T Consensus        89 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  160 (230)
T 3guy_A           89 QEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIE--SVRLE  160 (230)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999998875 499999999988775543      345556665  56555

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.82  E-value=4.1e-20  Score=125.75  Aligned_cols=115  Identities=14%  Similarity=0.102  Sum_probs=98.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.   ..+++   +   +..+.+|++| ++++++++++.+.++++|++   ||.. ...++.
T Consensus        19 a~~l~~~G~~V~~~~r~~~~---~~~~~---~---~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~   87 (239)
T 2ekp_A           19 AEALVARGYRVAIASRNPEE---AAQSL---G---AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVN-VRKPAL   87 (239)
T ss_dssp             HHHHHHTTCEEEEEESSCHH---HHHHH---T---CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCC-CCCCTT
T ss_pred             HHHHHHCCCEEEEEeCCHHH---HHHhh---C---cEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            56788999999999999765   33334   2   6788999999 99999999999999999999   7765 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.
T Consensus        88 ~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  136 (239)
T 2ekp_A           88 ELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG  136 (239)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC
Confidence            8899999999999999999999999999988777999999999887654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.81  E-value=7.7e-21  Score=134.88  Aligned_cols=141  Identities=18%  Similarity=0.120  Sum_probs=108.2

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhc-----CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNS-----GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD   72 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~   72 (147)
                      +++.|+++|++|++++|+...+++..+.+...     .+.++.++.+|++|+++++++++++.  ++++|++   ||.. 
T Consensus        18 la~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~g~iD~lVnnAG~~-   94 (327)
T 1jtv_A           18 LAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT--EGRVDVLVCNAGLG-   94 (327)
T ss_dssp             HHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT--TSCCSEEEECCCCC-
T ss_pred             HHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh--cCCCCEEEECCCcC-
Confidence            35778999999988887654433333333221     12368899999999999999998883  5899999   7765 


Q ss_pred             cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ...++.+.+.++|++.+++|+.+++++++.++|+|++++.|+|||+||..+..+.+..      +++...|+.  +|++|
T Consensus        95 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a~~~~~~--~la~e  172 (327)
T 1jtv_A           95 LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCE--SLAVL  172 (327)
T ss_dssp             CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHHHHHHHH--HHHHH
Confidence            3467778899999999999999999999999999987777999999999988765443      345566666  55554

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.81  E-value=5e-20  Score=130.30  Aligned_cols=138  Identities=14%  Similarity=0.119  Sum_probs=111.4

Q ss_pred             ccccccCCcEEEEe---------ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ec
Q 040927            2 KRSNQVHYSMGEAT---------TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GG   69 (147)
Q Consensus         2 ~~~l~~~G~~v~l~---------~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag   69 (147)
                      ++.|+++|++|+++         +|+.+.++++.+++...+. .   ..+|+++.++++++++++.+.++++|++   ||
T Consensus        26 a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~---~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           26 ALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-K---AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-E---EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCC
T ss_pred             HHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-e---EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            56788999999996         4567778888888876653 2   2489999999999999999999999999   78


Q ss_pred             CCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhh
Q 040927           70 LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRC  143 (147)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al  143 (147)
                      ... ..++.+.+.++|+..+++|+.|++++++.++|+|++++.|+||++||.++..+.++      ++.+...|+.  +|
T Consensus       102 ~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y~aSK~a~~~~~~--~l  178 (319)
T 1gz6_A          102 ILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLAN--TL  178 (319)
T ss_dssp             CCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH--HH
T ss_pred             CCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHHHHHHHHHHHHHH--HH
Confidence            763 35677889999999999999999999999999998877799999999877655433      3345555665  55


Q ss_pred             hcc
Q 040927          144 RRS  146 (147)
Q Consensus       144 ~~e  146 (147)
                      ++|
T Consensus       179 a~e  181 (319)
T 1gz6_A          179 VIE  181 (319)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.81  E-value=3.9e-20  Score=126.35  Aligned_cols=116  Identities=21%  Similarity=0.188  Sum_probs=96.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++. ++   .  ++.++.+|++|+++++    ++.+.++++|++   ||.. ...++.
T Consensus        23 a~~l~~~G~~V~~~~r~~~~~~~~~-~~---~--~~~~~~~D~~~~~~~~----~~~~~~~~id~lv~~Ag~~-~~~~~~   91 (246)
T 2ag5_A           23 ALAFAREGAKVIATDINESKLQELE-KY---P--GIQTRVLDVTKKKQID----QFANEVERLDVLFNVAGFV-HHGTVL   91 (246)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHGGGG-GS---T--TEEEEECCTTCHHHHH----HHHHHCSCCSEEEECCCCC-CCBCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHH-hc---c--CceEEEeeCCCHHHHH----HHHHHhCCCCEEEECCccC-CCCCcc
Confidence            5678899999999999987655443 22   1  5888999999999887    445567899999   7766 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                      +.+.++|++.+++|+.+++++++.++|+|.+++.|+||++||..+..+.+
T Consensus        92 ~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  141 (246)
T 2ag5_A           92 DCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV  141 (246)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC
Confidence            88999999999999999999999999999887779999999998876654

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.81  E-value=6.1e-20  Score=126.91  Aligned_cols=136  Identities=21%  Similarity=0.178  Sum_probs=106.5

Q ss_pred             ccccccCCcEEEEeecChhh-HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcC---CccEE---ecCCCc-
Q 040927            2 KRSNQVHYSMGEATTKDEKR-GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG---KLDIL---GGLPDN-   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g---~id~l---ag~~~~-   73 (147)
                      ++.|+++|++|++++|+.+. ++++.+++   +. ++.++.+|++|+++++++++++.+++|   ++|++   ||.... 
T Consensus        26 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~  101 (269)
T 2h7i_A           26 ARVAQEQGAQLVLTGFDRLRLIQRITDRL---PA-KAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQT  101 (269)
T ss_dssp             HHHHHHTTCEEEEEECSCHHHHHHHHTTS---SS-CCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGG
T ss_pred             HHHHHHCCCEEEEEecChHHHHHHHHHhc---CC-CceEEEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccc
Confidence            56788999999999998755 34433322   33 578899999999999999999999999   99999   776532 


Q ss_pred             ---chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhh
Q 040927           74 ---WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCR  144 (147)
Q Consensus        74 ---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~  144 (147)
                         ..++.+.+.++|++.+++|+.+++++++.++|+|.+.  |+||++||..+ .+.+.      ++++...++.  +++
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~iss~~~-~~~~~~~~Y~asKaa~~~l~~--~la  176 (269)
T 2h7i_A          102 GMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG--GSIVGMDFDPS-RAMPAYNWMTVAKSALESVNR--FVA  176 (269)
T ss_dssp             GSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECCCS-SCCTTTHHHHHHHHHHHHHHH--HHH
T ss_pred             cccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--CeEEEEcCccc-cccCchHHHHHHHHHHHHHHH--HHH
Confidence               3567789999999999999999999999999999763  79999999775 33332      3345555665  555


Q ss_pred             cc
Q 040927          145 RS  146 (147)
Q Consensus       145 ~e  146 (147)
                      +|
T Consensus       177 ~e  178 (269)
T 2h7i_A          177 RE  178 (269)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.80  E-value=5.1e-20  Score=125.87  Aligned_cols=135  Identities=19%  Similarity=0.115  Sum_probs=98.4

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|+++|++|++++|+.+.++++.+++.    .++.++.+|+++.+++.+++++    ++++|++   ||... ..++
T Consensus        30 ~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~----~~~id~li~~Ag~~~-~~~~  100 (249)
T 3f9i_A           30 IARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLISK----TSNLDILVCNAGITS-DTLA  100 (249)
T ss_dssp             HHHHHHHTTCEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHT----CSCCSEEEECCC--------
T ss_pred             HHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHHh----cCCCCEEEECCCCCC-CCcc
Confidence            357789999999999999988888777763    2588899999999998877654    4789999   77663 3566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.++..      .+...+..  ++++|
T Consensus       101 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  173 (249)
T 3f9i_A          101 IRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTK--SLSYE  173 (249)
T ss_dssp             ------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            678889999999999999999999999999888789999999999887765433      44455555  45443

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.80  E-value=7.9e-20  Score=136.74  Aligned_cols=130  Identities=13%  Similarity=0.006  Sum_probs=107.7

Q ss_pred             ccccccCCcE-EEEe-ecC-------------hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 040927            2 KRSNQVHYSM-GEAT-TKD-------------EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI   66 (147)
Q Consensus         2 ~~~l~~~G~~-v~l~-~r~-------------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   66 (147)
                      ++.|+++|++ |+++ +|+             .+.++++.+++...+. ++.++.||++|++++.++++++. +++++|+
T Consensus       268 A~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~v~~~~~Dvtd~~~v~~~~~~i~-~~g~id~  345 (525)
T 3qp9_A          268 ARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGA-TATVVTCDLTDAEAAARLLAGVS-DAHPLSA  345 (525)
T ss_dssp             HHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTC-EEEEEECCTTSHHHHHHHHHTSC-TTSCEEE
T ss_pred             HHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCC-EEEEEECCCCCHHHHHHHHHHHH-hcCCCcE
Confidence            5678899998 7777 888             3567778888888776 79999999999999999999998 7899999


Q ss_pred             E---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCchhhh
Q 040927           67 L---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITNEWAK  134 (147)
Q Consensus        67 l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~~~  134 (147)
                      +   ||.. ...++.+.+.++|++++++|+.|++++.+.+.|.+++++ .+.||++||+++..+.+++..+.
T Consensus       346 vVh~AGv~-~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya  416 (525)
T 3qp9_A          346 VLHLPPTV-DSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQGAYA  416 (525)
T ss_dssp             EEECCCCC-CCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCTTCHHHH
T ss_pred             EEECCcCC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCCCCHHHH
Confidence            9   7876 347788999999999999999999999999999998776 68999999999998877665433

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.80  E-value=8.2e-20  Score=131.32  Aligned_cols=141  Identities=9%  Similarity=-0.075  Sum_probs=107.6

Q ss_pred             cccccc-CCcEEEEeecChhhH------------HHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE-
Q 040927            2 KRSNQV-HYSMGEATTKDEKRG------------LAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-   67 (147)
Q Consensus         2 ~~~l~~-~G~~v~l~~r~~~~~------------~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-   67 (147)
                      ++.|++ .|++|++++|+.+..            +.+.+++...+. ++..+.+|++|+++++++++.+.+++|++|+| 
T Consensus        64 A~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~-~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLV  142 (405)
T 3zu3_A           64 RITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGL-YAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVI  142 (405)
T ss_dssp             HHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTC-CEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEE
T ss_pred             HHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            467888 999999999875432            223445566665 68899999999999999999999999999999 


Q ss_pred             --ecCCC------------cchhh---------------------hcccHHHHHHhHHHhhhhHH-HHHHHHHH-hhccC
Q 040927           68 --GGLPD------------NWYKM---------------------LTQTYELAEKCIQTNYYGNK-RMCEALIP-LLQLS  110 (147)
Q Consensus        68 --ag~~~------------~~~~~---------------------~~~~~~~~~~~~~~n~~~~~-~l~~~~~~-~l~~~  110 (147)
                        ||...            ...++                     .+.+.++|++++++|..+++ ++++.+.+ .|.+ 
T Consensus       143 NNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~-  221 (405)
T 3zu3_A          143 YSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLA-  221 (405)
T ss_dssp             ECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEE-
T ss_pred             EcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhh-
Confidence              66531            12333                     67899999999999999998 78888775 4554 


Q ss_pred             CCCeEEEEcCCCCCCcCCCc--------hhhhccccchhhhhcc
Q 040927          111 DSPRIVNASSSMGKLKNITN--------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus       111 ~~~~iv~isS~~~~~~~~~~--------~~~~~~~~~~~al~~e  146 (147)
                      ++|+|||+||+.+..+.+..        ++++..++.  +|+.|
T Consensus       222 ~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltr--sLA~E  263 (405)
T 3zu3_A          222 EGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVL--AIRES  263 (405)
T ss_dssp             EEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHH--HHHHH
T ss_pred             CCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHH--HHHHH
Confidence            45899999999998776654        345666666  55554

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.80  E-value=2.9e-19  Score=123.45  Aligned_cols=123  Identities=22%  Similarity=0.200  Sum_probs=106.1

Q ss_pred             ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++| +.+.++++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   ||.. ...++
T Consensus        38 a~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~-~~~~~  115 (274)
T 1ja9_A           38 AIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGME-VWCDE  115 (274)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCccc
Confidence            5678899999999999 77778888888877665 68899999999999999999999999999999   7765 34567


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC-CcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK-LKNI  128 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~  128 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|++ + ++||++||..+. .+.+
T Consensus       116 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~iv~~sS~~~~~~~~~  165 (274)
T 1ja9_A          116 LEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-GRIILTSSIAAVMTGIP  165 (274)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-EEEEEECCGGGTCCSCC
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-CEEEEEcChHhccCCCC
Confidence            78899999999999999999999999999983 3 899999998876 4443

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.80  E-value=1.9e-19  Score=132.58  Aligned_cols=138  Identities=18%  Similarity=0.118  Sum_probs=109.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCC-ccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGK-LDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~-id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+... +++.+.....   .+.++.||++|+++++++++++.+++++ +|++   ||.. ...++
T Consensus       230 A~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~---~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~-~~~~~  304 (454)
T 3u0b_A          230 AEVFARDGATVVAIDVDGAA-EDLKRVADKV---GGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGIT-RDKLL  304 (454)
T ss_dssp             HHHHHHTTCEEEEEECGGGH-HHHHHHHHHH---TCEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEeCCccH-HHHHHHHHHc---CCeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCccc-CCCcc
Confidence            57788999999999987421 2222222222   2568899999999999999999999976 9999   7876 34778


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++++++|+.+++++++.++|.|.+++.++||++||.++..+.+++.      .+...|++  ++++|
T Consensus       305 ~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l~~--~la~e  377 (454)
T 3u0b_A          305 ANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAE--ALAPV  377 (454)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHHHHH--HHHHH
Confidence            889999999999999999999999999999988889999999998887765543      34455655  55544

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.79  E-value=1e-20  Score=134.31  Aligned_cols=142  Identities=8%  Similarity=0.069  Sum_probs=107.8

Q ss_pred             CccccccCCcEEEEeecCh---------hhHHHHHHHHHhcCC--CceEEEEecCCCH--H------------------H
Q 040927            1 MKRSNQVHYSMGEATTKDE---------KRGLAAVEKLKNSGC--DNVIFHLLDVTDP--A------------------S   49 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~---------~~~~~~~~~l~~~~~--~~~~~~~~D~~~~--~------------------~   49 (147)
                      +++.|+++|++|++++++.         +.++.....+...+.  ..+.++.||+++.  +                  +
T Consensus        20 iA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~   99 (329)
T 3lt0_A           20 IAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYT   99 (329)
T ss_dssp             HHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGCCHHHHTSHHHHTCCSCS
T ss_pred             HHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhhhhhhcccccccccCHHH
Confidence            3678899999999877664         222222222211111  2367888999988  7                  9


Q ss_pred             HHHHHHHHHhhcCCccEE---ecCC-CcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC
Q 040927           50 VDSLVHFVSSQFGKLDIL---GGLP-DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL  125 (147)
Q Consensus        50 ~~~~~~~~~~~~g~id~l---ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  125 (147)
                      ++++++++.+++|++|++   ||+. ....++.+.+.++|++++++|+.|++++++.++|+|+++  |+|||+||.++..
T Consensus       100 v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~  177 (329)
T 3lt0_A          100 IEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQ--SSIISLTYHASQK  177 (329)
T ss_dssp             HHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTS
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--CeEEEEeCccccC
Confidence            999999999999999999   7764 245778899999999999999999999999999999875  8999999999887


Q ss_pred             cCCCc-------hhhhccccchhhhhcc
Q 040927          126 KNITN-------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus       126 ~~~~~-------~~~~~~~~~~~al~~e  146 (147)
                      +.+..       +++...|+.  +|++|
T Consensus       178 ~~~~~~~~Y~asKaal~~~~~--~la~e  203 (329)
T 3lt0_A          178 VVPGYGGGMSSAKAALESDTR--VLAYH  203 (329)
T ss_dssp             CCTTCTTTHHHHHHHHHHHHH--HHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHH--HHHHH
Confidence            66544       245556665  56554

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.79  E-value=3.3e-19  Score=121.46  Aligned_cols=122  Identities=20%  Similarity=0.230  Sum_probs=103.0

Q ss_pred             ccccccCC--cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcC--CccEE---ecCCCcc
Q 040927            2 KRSNQVHY--SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG--KLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G--~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~l---ag~~~~~   74 (147)
                      ++.|+++|  ++|++++|+.+.++++.+ +  .+. ++.++.+|++|+++++++++++.+.+|  ++|++   ||...+.
T Consensus        20 a~~l~~~g~~~~V~~~~r~~~~~~~l~~-~--~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~   95 (250)
T 1yo6_A           20 VQQLVKDKNIRHIIATARDVEKATELKS-I--KDS-RVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSY   95 (250)
T ss_dssp             HHHHHTCTTCCEEEEEESSGGGCHHHHT-C--CCT-TEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCB
T ss_pred             HHHHHhcCCCcEEEEEecCHHHHHHHHh-c--cCC-ceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCC
Confidence            56788999  999999999877665422 2  233 689999999999999999999999998  99999   7766435


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC------C-----CCeEEEEcCCCCCCcC
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS------D-----SPRIVNASSSMGKLKN  127 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~~~iv~isS~~~~~~~  127 (147)
                      .++.+.+.++|++.+++|+.+++.+++.++|.|.++      +     .++||++||..+..+.
T Consensus        96 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           96 GTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             CTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence            677788999999999999999999999999999765      4     6899999998887654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.79  E-value=2e-19  Score=123.91  Aligned_cols=124  Identities=19%  Similarity=0.206  Sum_probs=103.9

Q ss_pred             ccccccCC---cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcC--CccEE---ecCCCc
Q 040927            2 KRSNQVHY---SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG--KLDIL---GGLPDN   73 (147)
Q Consensus         2 ~~~l~~~G---~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~l---ag~~~~   73 (147)
                      ++.|+++|   ++|++++|+.+..+.+ +++...+. ++.++.+|++|+++++++++++.+.++  ++|++   ||....
T Consensus        38 a~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~  115 (267)
T 1sny_A           38 VKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHS-NIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPK  115 (267)
T ss_dssp             HHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCT-TEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCC
T ss_pred             HHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCC-ceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCC
Confidence            56788899   9999999998766543 44444444 689999999999999999999999988  89999   776643


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC------C-----CCeEEEEcCCCCCCcC
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS------D-----SPRIVNASSSMGKLKN  127 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~~~iv~isS~~~~~~~  127 (147)
                      ..++.+.+.++|++.+++|+.+++.+++.++|.|.++      +     .++||++||..+..+.
T Consensus       116 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  180 (267)
T 1sny_A          116 SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  180 (267)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             ccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccC
Confidence            5677788999999999999999999999999999865      3     5899999998876654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.79  E-value=6.6e-20  Score=139.44  Aligned_cols=138  Identities=14%  Similarity=0.151  Sum_probs=102.0

Q ss_pred             ccccccCCcEEEEeec---------ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ec
Q 040927            2 KRSNQVHYSMGEATTK---------DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GG   69 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag   69 (147)
                      ++.|+++|++|++++|         +.+.++++.+++...+. .+   .+|++|.++++++++++.+.+|++|++   ||
T Consensus        36 A~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~~---~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAG  111 (613)
T 3oml_A           36 ALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-EA---VADYNSVIDGAKVIETAIKAFGRVDILVNNAG  111 (613)
T ss_dssp             HHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC-CE---EECCCCGGGHHHHHC----------CEECCCC
T ss_pred             HHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-eE---EEEeCCHHHHHHHHHHHHHHCCCCcEEEECCC
Confidence            5788999999999987         66778888888887764 22   389999999999999999999999999   88


Q ss_pred             CCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhh
Q 040927           70 LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRC  143 (147)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al  143 (147)
                      .. ...++.+.+.++|+.++++|+.|+++++++++|+|++++.|+|||+||.++..+.++.      +++...|+.  +|
T Consensus       112 i~-~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~Y~asKaal~~lt~--~l  188 (613)
T 3oml_A          112 IL-RDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLAN--TV  188 (613)
T ss_dssp             CC-CCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH--HH
T ss_pred             CC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHH--HH
Confidence            76 3467888999999999999999999999999999999888999999998887665443      345566666  55


Q ss_pred             hcc
Q 040927          144 RRS  146 (147)
Q Consensus       144 ~~e  146 (147)
                      ++|
T Consensus       189 a~e  191 (613)
T 3oml_A          189 AIE  191 (613)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            544

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.78  E-value=8.2e-20  Score=124.64  Aligned_cols=133  Identities=11%  Similarity=0.019  Sum_probs=105.4

Q ss_pred             ccccccCCcEEEEe-e--cChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc-
Q 040927            2 KRSNQVHYSMGEAT-T--KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW-   74 (147)
Q Consensus         2 ~~~l~~~G~~v~l~-~--r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~-   74 (147)
                      ++.|+++|++|+++ +  |+.+.++++.+++  .+   .     |+.|+++++++++++.+.+|++|++   ||..... 
T Consensus        18 a~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~---~-----~~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~   87 (244)
T 1zmo_A           18 VEALTQDGYTVVCHDASFADAAERQRFESEN--PG---T-----IALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMN   87 (244)
T ss_dssp             HHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT---E-----EECCCCCGGGHHHHHGGGSSCEEEEEECCCCCTTGG
T ss_pred             HHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC---C-----cccCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            56788999999999 6  9988877776665  12   2     2337788888999999999999999   7765321 


Q ss_pred             -hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           75 -YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 -~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                       .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.+..      +++...|+.  ++++|
T Consensus        88 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  164 (244)
T 1zmo_A           88 RLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVE--SAAKT  164 (244)
T ss_dssp             GCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHHHHHH--HHHHH
T ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence             57778899999999999999999999999999988878999999999887765443      345555655  55544

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.78  E-value=5.7e-19  Score=121.85  Aligned_cols=129  Identities=18%  Similarity=0.152  Sum_probs=104.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++.... +.++.++.+|++|+++++++++.+.+++|++|++   ||...     
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-----   98 (267)
T 2gdz_A           24 AEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNN-----   98 (267)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-----
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-----
Confidence            56788999999999999888887777776531 2258899999999999999999999999999999   66542     


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC---CCeEEEEcCCCCCCcCCCc------hhhhccccc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD---SPRIVNASSSMGKLKNITN------EWAKGVLSD  139 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~------~~~~~~~~~  139 (147)
                          .++|++.+++|+.+++.+++.++|.|.+.+   .|+||++||..+..+.++.      +++...++.
T Consensus        99 ----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  165 (267)
T 2gdz_A           99 ----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR  165 (267)
T ss_dssp             ----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             ----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHHHHHH
Confidence                256889999999999999999999998753   5899999999887765443      344455555

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.78  E-value=1.1e-19  Score=131.61  Aligned_cols=142  Identities=13%  Similarity=0.004  Sum_probs=108.4

Q ss_pred             cccccc-CCcEEEEeecChhhHH------------HHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc-CCccEE
Q 040927            2 KRSNQV-HYSMGEATTKDEKRGL------------AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL   67 (147)
Q Consensus         2 ~~~l~~-~G~~v~l~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l   67 (147)
                      ++.|++ .|++|++++|+.+.++            .+.++++..|. ++..+.+|++|+++++++++.+.+++ |++|+|
T Consensus        78 A~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~-~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiL  156 (422)
T 3s8m_A           78 RITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGL-YSKSINGDAFSDAARAQVIELIKTEMGGQVDLV  156 (422)
T ss_dssp             HHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTC-CEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEE
T ss_pred             HHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            467888 9999999998765432            23456666665 68899999999999999999999999 999999


Q ss_pred             ---ecCC------------Ccchhh---------------------hcccHHHHHHhHHHhhhhHH-HHHHHHHHhhccC
Q 040927           68 ---GGLP------------DNWYKM---------------------LTQTYELAEKCIQTNYYGNK-RMCEALIPLLQLS  110 (147)
Q Consensus        68 ---ag~~------------~~~~~~---------------------~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~l~~~  110 (147)
                         ||..            ....++                     .+.+.++|+.++++|..+++ .+++.+++.+...
T Consensus       157 VNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~  236 (422)
T 3s8m_A          157 VYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLA  236 (422)
T ss_dssp             EECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEE
T ss_pred             EEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhh
Confidence               6652            112233                     35789999999999999987 8888887654333


Q ss_pred             CCCeEEEEcCCCCCCcCCCc--------hhhhccccchhhhhcc
Q 040927          111 DSPRIVNASSSMGKLKNITN--------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus       111 ~~~~iv~isS~~~~~~~~~~--------~~~~~~~~~~~al~~e  146 (147)
                      ++|+|||+||+++..+.+..        |+++..++.  +|+.|
T Consensus       237 ~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTr--sLA~E  278 (422)
T 3s8m_A          237 DGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQ--RLNAR  278 (422)
T ss_dssp             EEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHH--HHHHH
T ss_pred             CCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHH--HHHHH
Confidence            45899999999998765433        456667777  66665

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.77  E-value=3.4e-19  Score=121.34  Aligned_cols=129  Identities=8%  Similarity=-0.061  Sum_probs=103.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc--CCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF--GKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+.+..+           .....+.+|++|+++++++++++.+++  +++|++   ||... ..+
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~   91 (241)
T 1dhr_A           24 VQAFRARNWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWA-GGN   91 (241)
T ss_dssp             HHHHHTTTCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCC-CBC
T ss_pred             HHHHHhCCCEEEEEeCChhhcc-----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccC-CCC
Confidence            5678888999999999865422           135678899999999999999999999  799999   77653 355


Q ss_pred             h-hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 M-LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      + .+.+.++|++.+++|+.+++.+++.++|.|++  +|+||++||..+..+.++.      +++...+..  ++++|
T Consensus        92 ~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  164 (241)
T 1dhr_A           92 AKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQ--SLAGK  164 (241)
T ss_dssp             TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHH--HHTST
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            5 67788999999999999999999999999976  3899999999887765443      345555665  66655

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.77  E-value=2.9e-19  Score=123.27  Aligned_cols=118  Identities=32%  Similarity=0.492  Sum_probs=100.1

Q ss_pred             cccccc-CCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQV-HYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~-~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|++ .|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.++++|++   ||.... .. 
T Consensus        21 a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~-~~-   97 (276)
T 1wma_A           21 VRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFK-VA-   97 (276)
T ss_dssp             HHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCC-TT-
T ss_pred             HHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccccc-CC-
Confidence            567888 899999999999888888888877664 68899999999999999999999999999999   776532 22 


Q ss_pred             hccc-HHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           78 LTQT-YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        78 ~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      ...+ .++|+..+++|+.+++++++.++|.|.+.  |+||++||..+.
T Consensus        98 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~~sS~~~~  143 (276)
T 1wma_A           98 DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSV  143 (276)
T ss_dssp             CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHH
T ss_pred             CccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC--CEEEEECChhhh
Confidence            2333 58899999999999999999999998763  799999997665

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.77  E-value=1.3e-18  Score=118.43  Aligned_cols=133  Identities=14%  Similarity=0.086  Sum_probs=103.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++.     ...++.+|++|+++++++++    .++++|++   ||.. ...++.
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~Ag~~-~~~~~~   93 (244)
T 3d3w_A           24 VQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDWEATERALG----SVGPVDLLVNNAAVA-LLQPFL   93 (244)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHT----TCCCCCEEEECCCCC-CCBCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHHcC-----CCCEEEEeCCCHHHHHHHHH----HcCCCCEEEECCccC-CCcchh
Confidence            56788999999999999877776655431     35667999999999888775    56899999   7765 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++.      +.+.+.+..  ++++|
T Consensus        94 ~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  166 (244)
T 3d3w_A           94 EVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTK--VMALE  166 (244)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            889999999999999999999999999998765 6899999999887765443      344455554  44443

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.77  E-value=1.6e-18  Score=118.78  Aligned_cols=128  Identities=11%  Similarity=-0.033  Sum_probs=101.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+..+             ...+.+|++|+++++++++++.++++++|++   ||......++.
T Consensus        39 a~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~  105 (251)
T 3orf_A           39 VKFFKSKSWNTISIDFRENPNA-------------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASS  105 (251)
T ss_dssp             HHHHHHTTCEEEEEESSCCTTS-------------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTS
T ss_pred             HHHHHHCCCEEEEEeCCccccc-------------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCccc
Confidence            4567777888888887764311             2457789999999999999999999999999   77664434466


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|++  +|+||++||..+..+.++.      +++...+..  ++++|
T Consensus       106 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e  175 (251)
T 3orf_A          106 DEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGATKAATHHIIK--DLASE  175 (251)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHH--HHTST
T ss_pred             ccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            7889999999999999999999999999976  3899999999988776544      345555655  56655

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.76  E-value=5.1e-19  Score=120.07  Aligned_cols=129  Identities=9%  Similarity=-0.087  Sum_probs=103.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc--CCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF--GKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+.+..+           ....++.+|++|+++++++++++.+.+  +++|++   ||... ..+
T Consensus        20 a~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~   87 (236)
T 1ooe_A           20 LEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWA-GGS   87 (236)
T ss_dssp             HHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCC-CBC
T ss_pred             HHHHHHCCCEEEEEecCccccc-----------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccC-CCC
Confidence            5678889999999999875422           135677899999999999999999999  799999   77653 345


Q ss_pred             h-hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           77 M-LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        77 ~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      + .+.+.++|++.+++|+.+++.+++.++|.|.+  +|+||++||..+..+.++.      +++...|..  ++++|
T Consensus        88 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  160 (236)
T 1ooe_A           88 ASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTS--SLAAK  160 (236)
T ss_dssp             TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHH--HHHST
T ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHHHHHHHHH--HHHHH
Confidence            5 67788999999999999999999999999975  3899999999888765443      345555665  56655

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.75  E-value=5.8e-19  Score=137.48  Aligned_cols=136  Identities=16%  Similarity=0.095  Sum_probs=113.0

Q ss_pred             ccccc-cCCcE-EEEeecC---hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            2 KRSNQ-VHYSM-GEATTKD---EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         2 ~~~l~-~~G~~-v~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      ++.|+ ++|++ |++++|+   .+.++++.++++..+. ++.++.||++|+++++++++++.+.+ ++|++   ||... 
T Consensus       547 A~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~-~v~~~~~Dvsd~~~v~~~~~~~~~~~-~id~lVnnAGv~~-  623 (795)
T 3slk_A          547 ARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGA-EVSLQACDVADRETLAKVLASIPDEH-PLTAVVHAAGVLD-  623 (795)
T ss_dssp             HHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHTSCTTS-CEEEEEECCCCCC-
T ss_pred             HHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCC-cEEEEEeecCCHHHHHHHHHHHHHhC-CCEEEEECCCcCC-
Confidence            56787 79995 9999998   4567788888988876 79999999999999999999998876 99999   78773 


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCchhhhccccchhhhhcc
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~~~~al~~e  146 (147)
                      ..++.+++.++|++.+++|+.|++++++++.|.|      .|||+||+++..+.+++..|..+.....+|++|
T Consensus       624 ~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaAaka~~~alA~~  690 (795)
T 3slk_A          624 DGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAANSFLDALAQQ  690 (795)
T ss_dssp             CCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHHHHHHHHHHHHH
T ss_pred             CCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence            4788899999999999999999999999998887      699999999999887776543332222366554

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.75  E-value=4.2e-18  Score=115.88  Aligned_cols=118  Identities=14%  Similarity=0.098  Sum_probs=96.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   .  ...++.+|++|+++++++++    .++++|++   ||.. ...++.
T Consensus        24 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~Ag~~-~~~~~~   93 (244)
T 1cyd_A           24 VKALHASGAKVVAVTRTNSDLVSLAKEC---P--GIEPVCVDLGDWDATEKALG----GIGPVDLLVNNAALV-IMQPFL   93 (244)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHS---T--TCEEEECCTTCHHHHHHHHT----TCCCCSEEEECCCCC-CCBCGG
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHhc---c--CCCcEEecCCCHHHHHHHHH----HcCCCCEEEECCccc-CCCCcc
Confidence            5678899999999999987776655443   2  35667999999999888775    56889999   7765 346677


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++
T Consensus        94 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  145 (244)
T 1cyd_A           94 EVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN  145 (244)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT
T ss_pred             cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC
Confidence            889999999999999999999999999998765 689999999888766544

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.75  E-value=6.4e-18  Score=122.89  Aligned_cols=142  Identities=13%  Similarity=0.051  Sum_probs=107.5

Q ss_pred             ccccccCCcEEEEeecChhh------------HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--
Q 040927            2 KRSNQVHYSMGEATTKDEKR------------GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--   67 (147)
                      ++.|++.|++|++++|+...            .+.+.+.+...+. ++..+.||++|+++++++++.+.+++|++|++  
T Consensus        79 a~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVn  157 (418)
T 4eue_A           79 SVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGL-VAKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVY  157 (418)
T ss_dssp             HHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             HHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCC-cEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            45677889999999987533            2444445555554 68899999999999999999999999999999  


Q ss_pred             -ecCCC------------cchhh---------------------hcccHHHHHHhHHHhhhhHH-HHHHHHHHhhccCCC
Q 040927           68 -GGLPD------------NWYKM---------------------LTQTYELAEKCIQTNYYGNK-RMCEALIPLLQLSDS  112 (147)
Q Consensus        68 -ag~~~------------~~~~~---------------------~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~l~~~~~  112 (147)
                       ||...            ...++                     .+.+.++|+.++++|..+++ .+++.+++.+...++
T Consensus       158 NAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~g  237 (418)
T 4eue_A          158 SLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDK  237 (418)
T ss_dssp             CCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEE
T ss_pred             CCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCC
Confidence             66530            11222                     35689999999999999988 788888775544456


Q ss_pred             CeEEEEcCCCCCCcCCCc--------hhhhccccchhhhhcc
Q 040927          113 PRIVNASSSMGKLKNITN--------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus       113 ~~iv~isS~~~~~~~~~~--------~~~~~~~~~~~al~~e  146 (147)
                      |+||++||+++..+.+..        ++++..++.  +|+.|
T Consensus       238 g~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltr--sLA~E  277 (418)
T 4eue_A          238 ATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAK--LINEK  277 (418)
T ss_dssp             EEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHH--HHHHH
T ss_pred             cEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHH--HHHHH
Confidence            899999999988776554        345666666  66665

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.74  E-value=3.9e-19  Score=124.17  Aligned_cols=110  Identities=25%  Similarity=0.225  Sum_probs=92.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. ++.++.+|++|+++++++++++    +++|++   ||...+   ..
T Consensus        33 a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dl~d~~~v~~~~~~~----~~iD~lv~nAg~~~~---~~  101 (291)
T 3rd5_A           33 ARELARRGATVIMAVRDTRKGEAAARTM---AG-QVEVRELDLQDLSSVRRFADGV----SGADVLINNAGIMAV---PY  101 (291)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHTTS---SS-EEEEEECCTTCHHHHHHHHHTC----CCEEEEEECCCCCSC---CC
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHh---cC-CeeEEEcCCCCHHHHHHHHHhc----CCCCEEEECCcCCCC---cc
Confidence            5778999999999999998877766555   33 6899999999999998888765    789999   776532   24


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                      +.+.++|++.+++|+.+++++++.++|.|.+    +||++||.++..+
T Consensus       102 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~  145 (291)
T 3rd5_A          102 ALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPG  145 (291)
T ss_dssp             CBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTC
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccC
Confidence            5678899999999999999999999999975    6999999887754

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.74  E-value=3.1e-18  Score=115.37  Aligned_cols=130  Identities=15%  Similarity=0.109  Sum_probs=98.9

Q ss_pred             CCcEEEEeecChhhHHHHHHHHHhcCCCceEEEE----ecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcc
Q 040927            8 HYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHL----LDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQ   80 (147)
Q Consensus         8 ~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~----~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~   80 (147)
                      .|..+++++-+..-...+.+.+...|. ++....    +|++|+++++++++++    +++|++   ||......++.+.
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~D~~~~~~v~~~~~~~----g~id~lv~nAg~~~~~~~~~~~   79 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTGLDISDEKSVYHYFETI----GAFDHLIVTAGSYAPAGKVVDV   79 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGTCCTTCHHHHHHHHHHH----CSEEEEEECCCCCCCCSCTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcccCCCCHHHHHHHHHHh----CCCCEEEECCCCCCCCCCcccC
Confidence            355566677666666677777765553 333332    8999999999888654    899999   7766455778889


Q ss_pred             cHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           81 TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        81 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.++|++.+++|+.+++++++.++|.|++  +|+||++||..+..+.++.      +++...++.  +|++|
T Consensus        80 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  147 (223)
T 3uce_A           80 EVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAINAAIEATTK--VLAKE  147 (223)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             CHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHHHHHHHHHH--HHHHh
Confidence            99999999999999999999999999976  3899999999988776544      345556665  56554

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.74  E-value=5e-18  Score=116.32  Aligned_cols=127  Identities=23%  Similarity=0.196  Sum_probs=98.0

Q ss_pred             ccccccCCcE-EEEeecChhhHHHHHHHHHhc-CCCceEEEEecCCCH-HHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927            2 KRSNQVHYSM-GEATTKDEKRGLAAVEKLKNS-GCDNVIFHLLDVTDP-ASVDSLVHFVSSQFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         2 ~~~l~~~G~~-v~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~l---ag~~~~~~   75 (147)
                      ++.|+++|++ |++++|+...  +..+++... ++.++.++.+|++|+ ++++++++++.+.++++|++   ||..    
T Consensus        22 a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~----   95 (254)
T 1sby_A           22 SRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL----   95 (254)
T ss_dssp             HHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCC----
T ss_pred             HHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECCccC----
Confidence            5678899996 9999998632  222333332 123688999999998 99999999999999999999   7753    


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC---CCeEEEEcCCCCCCcCCCc------hhhhccccc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD---SPRIVNASSSMGKLKNITN------EWAKGVLSD  139 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~------~~~~~~~~~  139 (147)
                           +.++|++.+++|+.+++.+++.++|.|.+++   .|+||++||.++..+.+..      +++...|+.
T Consensus        96 -----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (254)
T 1sby_A           96 -----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTN  163 (254)
T ss_dssp             -----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHH
T ss_pred             -----CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHHHH
Confidence                 2366899999999999999999999997754   5899999999887765443      344455555

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.74  E-value=4.7e-18  Score=115.89  Aligned_cols=127  Identities=12%  Similarity=0.071  Sum_probs=99.7

Q ss_pred             cccccc-CCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQV-HYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~-~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|++ .|++|++++|+.+.           ...++.++.+|++|+++++++++.+.  ++++|++   ||... ..++
T Consensus        21 a~~l~~~~g~~v~~~~~~~~~-----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~id~lv~nAg~~~-~~~~   86 (244)
T 4e4y_A           21 VELLLQNKNHTVINIDIQQSF-----------SAENLKFIKADLTKQQDITNVLDIIK--NVSFDGIFLNAGILI-KGSI   86 (244)
T ss_dssp             HHHHTTSTTEEEEEEESSCCC-----------CCTTEEEEECCTTCHHHHHHHHHHTT--TCCEEEEEECCCCCC-CBCT
T ss_pred             HHHHHhcCCcEEEEecccccc-----------ccccceEEecCcCCHHHHHHHHHHHH--hCCCCEEEECCccCC-CCCc
Confidence            456676 78888888876531           11247889999999999999995553  6899999   78763 3677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.+.  |+||++||..+..+.++.      +++...|+.  +|++|
T Consensus        87 ~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  157 (244)
T 4e4y_A           87 FDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTK--SLALD  157 (244)
T ss_dssp             TTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence            889999999999999999999999999999765  789999999988776554      345566666  55554

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.73  E-value=1.7e-17  Score=136.30  Aligned_cols=134  Identities=14%  Similarity=0.162  Sum_probs=108.8

Q ss_pred             ccccccCCcEEEEe-ecChhhHHHHHHHHHh----cCCCceEEEEecCCCHHHHHHHHHHHHhh-----cC-CccEE---
Q 040927            2 KRSNQVHYSMGEAT-TKDEKRGLAAVEKLKN----SGCDNVIFHLLDVTDPASVDSLVHFVSSQ-----FG-KLDIL---   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-----~g-~id~l---   67 (147)
                      ++.|+++|++|+++ .|+.+.++++.+++..    .+. ++.++.||++|.++++++++.+.+.     +| ++|++   
T Consensus       693 A~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~-~v~~v~~DVsd~~sV~alv~~i~~~~~~~G~G~~LDiLVNN  771 (1887)
T 2uv8_A          693 LQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGS-TLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPF  771 (1887)
T ss_dssp             HHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTC-EEEEEECCTTCHHHHHHHHHHHHSCTTTTSCCCCCSEEEEC
T ss_pred             HHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCC-eEEEEEecCCCHHHHHHHHHHHHHhccccccCCCCeEEEEC
Confidence            56788999999998 5777777777666633    243 6889999999999999999999988     66 99999   


Q ss_pred             ecCCCcch-hhhccc--HHHHHHhHHHhhhhHHHHHHHH--HHhhccCCCCeEEEEcCCCCCCc----CCCchhhhccc
Q 040927           68 GGLPDNWY-KMLTQT--YELAEKCIQTNYYGNKRMCEAL--IPLLQLSDSPRIVNASSSMGKLK----NITNEWAKGVL  137 (147)
Q Consensus        68 ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~iv~isS~~~~~~----~~~~~~~~~~~  137 (147)
                      ||.... . ++.+.+  .++|++++++|+.+++.+++.+  +|.|.++++|+|||+||..+..+    |..++++...|
T Consensus       772 AGi~~~-~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~gg~~aYaASKAAL~~L  849 (1887)
T 2uv8_A          772 AAIPEQ-GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFGGDGMYSESKLSLETL  849 (1887)
T ss_dssp             CCCCCC-SBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSSCBTTHHHHHHHGGGH
T ss_pred             CCcCCC-CCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccCCCchHHHHHHHHHHH
Confidence            787633 4 677888  8999999999999999999998  78998877789999999998766    22234555555

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.72  E-value=4.8e-18  Score=120.05  Aligned_cols=96  Identities=11%  Similarity=0.043  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHhhcCCccEE---ecCCC-cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           47 PASVDSLVHFVSSQFGKLDIL---GGLPD-NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        47 ~~~~~~~~~~~~~~~g~id~l---ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      +++++++++++.+++|++|++   ||... ...++.+.+.++|++.+++|+.+++++++.++|+|.+.  |+|||+||..
T Consensus       117 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~Iv~isS~~  194 (319)
T 2ptg_A          117 GFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEG--GSALALSYIA  194 (319)
T ss_dssp             CCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcC--ceEEEEeccc
Confidence            458999999999999999999   77652 24677789999999999999999999999999999763  8999999998


Q ss_pred             CCCcCCC-------chhhhccccchhhhhcc
Q 040927          123 GKLKNIT-------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus       123 ~~~~~~~-------~~~~~~~~~~~~al~~e  146 (147)
                      +..+.+.       ++++...|+.  +|++|
T Consensus       195 ~~~~~~~~~~~Y~asKaal~~l~~--~la~e  223 (319)
T 2ptg_A          195 SEKVIPGYGGGMSSAKAALESDCR--TLAFE  223 (319)
T ss_dssp             ------------------THHHHH--HHHHH
T ss_pred             cccccCccchhhHHHHHHHHHHHH--HHHHH
Confidence            8665433       3445556666  55544

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.71  E-value=1.4e-17  Score=123.58  Aligned_cols=125  Identities=14%  Similarity=0.083  Sum_probs=105.6

Q ss_pred             ccccccCCc-EEEEeecCh---hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYS-MGEATTKDE---KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~-~v~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|+++|+ +|++++|+.   +..+++.+++...+. ++.++.||++|++++.++++++.+. +++|++   ||.....
T Consensus       256 A~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~-~v~~~~~Dvtd~~~v~~~~~~i~~~-g~ld~vVh~AGv~~~~  333 (496)
T 3mje_A          256 ARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGV-RVTIAACDAADREALAALLAELPED-APLTAVFHSAGVAHDD  333 (496)
T ss_dssp             HHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHTCCTT-SCEEEEEECCCCCCSC
T ss_pred             HHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHh-CCCeEEEECCcccCCC
Confidence            577889999 799999964   446778888888776 7999999999999999999998777 789999   7776344


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCchh
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEW  132 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  132 (147)
                      .++.+.+.++|++.+++|+.+++++.+.+.+.    ..+.||++||+++..+.+++..
T Consensus       334 ~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~g~~g~~~  387 (496)
T 3mje_A          334 APVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVWGSGGQPG  387 (496)
T ss_dssp             CCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHTTCTTCHH
T ss_pred             CCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcCCCCCcHH
Confidence            77889999999999999999999999988765    3478999999999888766554

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.70  E-value=1.8e-18  Score=117.93  Aligned_cols=133  Identities=14%  Similarity=0.055  Sum_probs=88.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|++ |++|++++|+.+.++++.+    .  .++.++.+|+++.++ .+.+.+..+.++++|++   ||.. ...++.
T Consensus        22 a~~l~~-g~~v~~~~r~~~~~~~~~~----~--~~~~~~~~D~~~~~~-~~~~~~~~~~~~~id~lv~~Ag~~-~~~~~~   92 (245)
T 3e9n_A           22 VKDLSR-DHIVYALGRNPEHLAALAE----I--EGVEPIESDIVKEVL-EEGGVDKLKNLDHVDTLVHAAAVA-RDTTIE   92 (245)
T ss_dssp             HHHHTT-TSEEEEEESCHHHHHHHHT----S--TTEEEEECCHHHHHH-TSSSCGGGTTCSCCSEEEECC----------
T ss_pred             HHHHhC-CCeEEEEeCCHHHHHHHHh----h--cCCcceecccchHHH-HHHHHHHHHhcCCCCEEEECCCcC-CCCchh
Confidence            466777 9999999999877665433    2  258899999998876 44455556678999999   7766 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.|++++ |+||++||..+..+.++.      +.+...|+.  +|++|
T Consensus        93 ~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e  163 (245)
T 3e9n_A           93 AGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLAD--AFRKE  163 (245)
T ss_dssp             -CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            889999999999999999999999999998765 899999999988775543      345555555  55544

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.69  E-value=2e-17  Score=116.75  Aligned_cols=139  Identities=14%  Similarity=-0.013  Sum_probs=98.5

Q ss_pred             ccccccCCcEEEEeecChh-----------hHHHHHHHHHhcCCC--ceEEEEe------------cCC--------CHH
Q 040927            2 KRSNQVHYSMGEATTKDEK-----------RGLAAVEKLKNSGCD--NVIFHLL------------DVT--------DPA   48 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~-----------~~~~~~~~l~~~~~~--~~~~~~~------------D~~--------~~~   48 (147)
                      ++.|+++|++|++++|+..           .++++ +++.. +..  ...++.+            |++        |++
T Consensus        28 a~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~  105 (315)
T 2o2s_A           28 AKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPD-GSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGY  105 (315)
T ss_dssp             HHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTT-SCBCCCSCEEECCTTCSSTTSSCHHHHTCGGGSSCCCC
T ss_pred             HHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhc-cccccccccccccccccccchhhhhhhcccccccCCHH
Confidence            5778999999999987641           11221 12211 110  0234444            344        366


Q ss_pred             HHHHHHHHHHhhcCCccEE---ecCCC-cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           49 SVDSLVHFVSSQFGKLDIL---GGLPD-NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        49 ~~~~~~~~~~~~~g~id~l---ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      +++++++++.+++|++|++   ||... ...++.+.+.++|++.+++|+.+++++++.++|+|.+.  |+|||+||.++.
T Consensus       106 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--g~Iv~isS~~~~  183 (315)
T 2o2s_A          106 TIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEG--GSAVTLSYLAAE  183 (315)
T ss_dssp             SHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEE--EEEEEEEEGGGT
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CEEEEEeccccc
Confidence            8999999999999999999   77542 24677789999999999999999999999999999763  899999998887


Q ss_pred             CcCCCc-------hhhhccccchhhhhcc
Q 040927          125 LKNITN-------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus       125 ~~~~~~-------~~~~~~~~~~~al~~e  146 (147)
                      .+.+..       +++...|+.  +|++|
T Consensus       184 ~~~~~~~~~Y~asKaal~~l~~--~la~e  210 (315)
T 2o2s_A          184 RVVPGYGGGMSSAKAALESDTR--TLAWE  210 (315)
T ss_dssp             SCCTTCCTTHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCCccHHHHHHHHHHHHHHH--HHHHH
Confidence            654432       344555555  55544

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.69  E-value=3.2e-17  Score=112.16  Aligned_cols=126  Identities=16%  Similarity=0.046  Sum_probs=95.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+..+    ++   +  +..++ +|+  .++++.+++.+    .++|++   ||.. ...++.
T Consensus        36 a~~l~~~G~~V~~~~r~~~~~~----~~---~--~~~~~-~D~--~~~~~~~~~~~----~~iD~lv~~Ag~~-~~~~~~   98 (249)
T 1o5i_A           36 ADVLSQEGAEVTICARNEELLK----RS---G--HRYVV-CDL--RKDLDLLFEKV----KEVDILVLNAGGP-KAGFFD   98 (249)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHH----HT---C--SEEEE-CCT--TTCHHHHHHHS----CCCSEEEECCCCC-CCBCGG
T ss_pred             HHHHHHCCCEEEEEcCCHHHHH----hh---C--CeEEE-eeH--HHHHHHHHHHh----cCCCEEEECCCCC-CCCChh
Confidence            5678899999999999873322    22   2  46677 999  55677776654    379998   7765 346777


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.++.      +++...|+.  ++++|
T Consensus        99 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e  170 (249)
T 1o5i_A           99 ELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLK--TLSFE  170 (249)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            8899999999999999999999999999988777999999999887765443      234445555  44443

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.69  E-value=1.1e-17  Score=134.49  Aligned_cols=124  Identities=15%  Similarity=0.170  Sum_probs=103.5

Q ss_pred             ccccccCCcEEEEe-ecChhhHHHHHHHHHhc-C--CCceEEEEecCCCHHHHHHHHHHHHhh-----cC-CccEE---e
Q 040927            2 KRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNS-G--CDNVIFHLLDVTDPASVDSLVHFVSSQ-----FG-KLDIL---G   68 (147)
Q Consensus         2 ~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~-~--~~~~~~~~~D~~~~~~~~~~~~~~~~~-----~g-~id~l---a   68 (147)
                      ++.|+++|++|+++ .|+.+.++++.+++... +  +.++.++.||++|+++++++++.+.+.     +| ++|++   |
T Consensus       494 Ar~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~GfG~~IDILVNNA  573 (1688)
T 2pff_A          494 LQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFA  573 (1688)
T ss_dssp             HHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTSSSCCCCCCEEECCC
T ss_pred             HHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhccccccCCCCeEEEECC
Confidence            56788999999998 57776666666666332 1  236889999999999999999999988     77 99999   7


Q ss_pred             cCCCcch-hhhccc--HHHHHHhHHHhhhhHHHHHHHH--HHhhccCCCCeEEEEcCCCCCCc
Q 040927           69 GLPDNWY-KMLTQT--YELAEKCIQTNYYGNKRMCEAL--IPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        69 g~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                      |.... . ++.+.+  .++|++++++|+.+++.+++.+  +|.|.++++|+||++||.++..+
T Consensus       574 GI~~~-g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G  635 (1688)
T 2pff_A          574 AIPEQ-GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG  635 (1688)
T ss_dssp             CCCCC-SBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS
T ss_pred             CcCCC-CCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC
Confidence            87633 4 677777  8999999999999999999999  88998877789999999988766

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.69  E-value=7.8e-17  Score=132.33  Aligned_cols=136  Identities=16%  Similarity=0.164  Sum_probs=108.0

Q ss_pred             ccccccCCcEEEEee-cChhhHHHHHHHHH----hcCCCceEEEEecCCCHHHHHHHHHHHHhh---cC-CccEE---ec
Q 040927            2 KRSNQVHYSMGEATT-KDEKRGLAAVEKLK----NSGCDNVIFHLLDVTDPASVDSLVHFVSSQ---FG-KLDIL---GG   69 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~-r~~~~~~~~~~~l~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~---~g-~id~l---ag   69 (147)
                      ++.|+++|++|++++ |+.+.+++..+++.    ..+. ++.++.||++|.++++++++.+.+.   +| ++|++   ||
T Consensus       670 Ar~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~-~v~~v~~DVsd~esV~alv~~i~~~~~~~G~~IDiLVnNAG  748 (1878)
T 2uv9_A          670 LQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGS-QLVVVPFNQGSKQDVEALVNYIYDTKNGLGWDLDYVVPFAA  748 (1878)
T ss_dssp             HHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTC-EEEEEECCTTCHHHHHHHHHHHHCSSSSCCCCCSEEEECCC
T ss_pred             HHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCC-eEEEEEcCCCCHHHHHHHHHHHHHhhcccCCCCcEEEeCcc
Confidence            567899999999995 66666666555552    2243 6889999999999999999999998   88 99999   78


Q ss_pred             CCCcch-hhhccc--HHHHHHhHHHhhhhHHHHHHH--HHHhhccCCCCeEEEEcCCCCCCcC----CCchhhhccccc
Q 040927           70 LPDNWY-KMLTQT--YELAEKCIQTNYYGNKRMCEA--LIPLLQLSDSPRIVNASSSMGKLKN----ITNEWAKGVLSD  139 (147)
Q Consensus        70 ~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~l~~~~~~~iv~isS~~~~~~~----~~~~~~~~~~~~  139 (147)
                      .... . ++.+.+  .++|++++++|+.+++.+++.  ++|.|.+++.|+|||+||.++..+.    ..++++...|..
T Consensus       749 i~~~-~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~gg~~aYaASKAAL~aLt~  826 (1878)
T 2uv9_A          749 IPEN-GREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFGNDGLYSESKLALETLFN  826 (1878)
T ss_dssp             CCCT-TCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSSCCSSHHHHHHHHTTHHH
T ss_pred             cccC-CCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccCCchHHHHHHHHHHHHHH
Confidence            7633 4 677888  899999999999999999987  7888887767899999999987763    223445555543

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.65  E-value=4.8e-17  Score=113.81  Aligned_cols=96  Identities=13%  Similarity=0.038  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHHhhcCCccEE---ecCCC-cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           47 PASVDSLVHFVSSQFGKLDIL---GGLPD-NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        47 ~~~~~~~~~~~~~~~g~id~l---ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      +++++++++++.+++|++|++   ||... ...++.+.+.++|++.+++|+.+++++++.++|+|++  +|+||++||..
T Consensus       103 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~  180 (297)
T 1d7o_A          103 NWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP--GGASISLTYIA  180 (297)
T ss_dssp             CCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc--CceEEEEeccc
Confidence            678999999999999999999   77542 2466778899999999999999999999999999976  38999999988


Q ss_pred             CCCcCCCc-------hhhhccccchhhhhcc
Q 040927          123 GKLKNITN-------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus       123 ~~~~~~~~-------~~~~~~~~~~~al~~e  146 (147)
                      +..+.+..       +++...|+.  +|++|
T Consensus       181 ~~~~~~~~~~~Y~asKaa~~~~~~--~la~e  209 (297)
T 1d7o_A          181 SERIIPGYGGGMSSAKAALESDTR--VLAFE  209 (297)
T ss_dssp             GTSCCTTCTTTHHHHHHHHHHHHH--HHHHH
T ss_pred             cccCCCCcchHHHHHHHHHHHHHH--HHHHH
Confidence            87665443       344555555  55544

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.63  E-value=1.2e-16  Score=108.41  Aligned_cols=113  Identities=17%  Similarity=0.089  Sum_probs=89.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+ .            .++.++.+|++|+++++++++++ +.++++|++   +|.... .++.
T Consensus        19 a~~l~~~G~~V~~~~r~~~-~------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~li~~ag~~~~-~~~~   83 (242)
T 1uay_A           19 ALALKARGYRVVVLDLRRE-G------------EDLIYVEGDVTREEDVRRAVARA-QEEAPLFAVVSAAGVGLA-EKIL   83 (242)
T ss_dssp             HHHHHHHTCEEEEEESSCC-S------------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEEEEEECCCCCCC-CCSB
T ss_pred             HHHHHHCCCEEEEEccCcc-c------------cceEEEeCCCCCHHHHHHHHHHH-HhhCCceEEEEcccccCc-cccc
Confidence            5677888999998888764 1            13678899999999999999999 888999998   665422 3333


Q ss_pred             c----ccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC---C---CeEEEEcCCCCCCcCCC
Q 040927           79 T----QTYELAEKCIQTNYYGNKRMCEALIPLLQLSD---S---PRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~----~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~---~~iv~isS~~~~~~~~~  129 (147)
                      +    .+.++|++.+++|+.+++.+++.++|.|.+++   .   ++||++||..+..+.++
T Consensus        84 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  144 (242)
T 1uay_A           84 GKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG  144 (242)
T ss_dssp             CSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT
T ss_pred             ccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC
Confidence            3    34569999999999999999999999998764   3   39999999887665443

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.63  E-value=3.9e-16  Score=115.93  Aligned_cols=123  Identities=19%  Similarity=0.041  Sum_probs=101.5

Q ss_pred             ccccccCCcE-EEEeecChh---hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYSM-GEATTKDEK---RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~~-v~l~~r~~~---~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|+++|++ |++++|+..   ..+++.+++...+. ++.++.||++|++++.++++.+ ..++++|++   ||.. ..
T Consensus       243 a~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~-~v~~~~~Dv~d~~~v~~~~~~i-~~~g~ld~VIh~AG~~-~~  319 (486)
T 2fr1_A          243 ARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA-RTTVAACDVTDRESVRELLGGI-GDDVPLSAVFHAAATL-DD  319 (486)
T ss_dssp             HHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHTS-CTTSCEEEEEECCCCC-CC
T ss_pred             HHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCC-EEEEEEeCCCCHHHHHHHHHHH-HhcCCCcEEEECCccC-CC
Confidence            5678888995 999999864   46677778877775 6999999999999999999998 566899999   7766 34


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE  131 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  131 (147)
                      .++.+.+.++|++.+++|+.|++++.+.+.+.    +.+.||++||.++..+.++..
T Consensus       320 ~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~~~~~V~~SS~a~~~g~~g~~  372 (486)
T 2fr1_A          320 GTVDTLTGERIERASRAKVLGARNLHELTREL----DLTAFVLFSSFASAFGAPGLG  372 (486)
T ss_dssp             CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS----CCSEEEEEEEHHHHTCCTTCT
T ss_pred             CccccCCHHHHHHHHHHHHHHHHHHHHHhCcC----CCCEEEEEcChHhcCCCCCCH
Confidence            67778999999999999999999999987542    458899999988877665443

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.61  E-value=4e-16  Score=132.47  Aligned_cols=125  Identities=14%  Similarity=0.060  Sum_probs=91.4

Q ss_pred             ccccccCCcE-EEEeecChhh---HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYSM-GEATTKDEKR---GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~~-v~l~~r~~~~---~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|+++|++ |++++|+...   .++..+++...+. ++.++.||++|.++++++++++. ++|++|++   ||.. ..
T Consensus      1901 a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~-~v~~~~~Dvsd~~~v~~~~~~~~-~~g~id~lVnnAgv~-~~ 1977 (2512)
T 2vz8_A         1901 AQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGV-QVLVSTSNASSLDGARSLITEAT-QLGPVGGVFNLAMVL-RD 1977 (2512)
T ss_dssp             HHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTC-EEEEECCCSSSHHHHHHHHHHHH-HHSCEEEEEECCCC----
T ss_pred             HHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCC-EEEEEecCCCCHHHHHHHHHHHH-hcCCCcEEEECCCcC-CC
Confidence            5788999997 8888998543   3455666666665 68899999999999999999987 47999999   7766 34


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE  131 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  131 (147)
                      .++.+++.++|++.+++|+.|++++.+.+.+.|.+.  |+||++||+++..+.+++.
T Consensus      1978 ~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~~g~~ 2032 (2512)
T 2vz8_A         1978 AVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGNAGQA 2032 (2512)
T ss_dssp             -------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTCTTCH
T ss_pred             CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCCCCcH
Confidence            678889999999999999999999999999988654  8999999999888876554

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.59  E-value=2.2e-15  Score=99.67  Aligned_cols=84  Identities=18%  Similarity=0.153  Sum_probs=70.6

Q ss_pred             EEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEE
Q 040927           40 HLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIV  116 (147)
Q Consensus        40 ~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv  116 (147)
                      +.+|++|+++++++++.+    +++|++   ||.. ...++.+.+.++|++.+++|+.+++.+++.+.|.|.+.  ++||
T Consensus        39 ~~~D~~~~~~~~~~~~~~----~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv  111 (202)
T 3d7l_A           39 VTVDITNIDSIKKMYEQV----GKVDAIVSATGSA-TFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--GSFT  111 (202)
T ss_dssp             EECCTTCHHHHHHHHHHH----CCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--EEEE
T ss_pred             eeeecCCHHHHHHHHHHh----CCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--CEEE
Confidence            579999999999888764    789999   7765 34667788999999999999999999999999998653  8999


Q ss_pred             EEcCCCCCCcCCCc
Q 040927          117 NASSSMGKLKNITN  130 (147)
Q Consensus       117 ~isS~~~~~~~~~~  130 (147)
                      ++||..+..+.++.
T Consensus       112 ~~sS~~~~~~~~~~  125 (202)
T 3d7l_A          112 LTTGIMMEDPIVQG  125 (202)
T ss_dssp             EECCGGGTSCCTTC
T ss_pred             EEcchhhcCCCCcc
Confidence            99998877665443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.57  E-value=1.3e-14  Score=108.29  Aligned_cols=120  Identities=18%  Similarity=0.137  Sum_probs=97.8

Q ss_pred             ccccccCCc-EEEEeecChh---hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYS-MGEATTKDEK---RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~-~v~l~~r~~~---~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|+++|+ +|++++|+..   .++++.+++...+. ++.++.||++|++++.++++.     +++|++   ||.. ..
T Consensus       276 A~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~-~v~~~~~Dvtd~~~v~~~~~~-----~~ld~VVh~AGv~-~~  348 (511)
T 2z5l_A          276 ARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGC-EVVHAACDVAERDALAALVTA-----YPPNAVFHTAGIL-DD  348 (511)
T ss_dssp             HHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTC-EEEEEECCSSCHHHHHHHHHH-----SCCSEEEECCCCC-CC
T ss_pred             HHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCC-EEEEEEeCCCCHHHHHHHHhc-----CCCcEEEECCccc-CC
Confidence            567888999 5999999863   46677788877765 699999999999999988876     789998   7776 34


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE  131 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  131 (147)
                      .++.+.+.++|+..+++|+.+++++.+.+.+..   +.+.||++||.++..+.+++.
T Consensus       349 ~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~---~~~~~V~~SS~a~~~g~~g~~  402 (511)
T 2z5l_A          349 AVIDTLSPESFETVRGAKVCGAELLHQLTADIK---GLDAFVLFSSVTGTWGNAGQG  402 (511)
T ss_dssp             BCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT---TCCCEEEEEEGGGTTCCTTBH
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHHHHhhcc---CCCEEEEEeCHHhcCCCCCCH
Confidence            677788999999999999999999998865321   347899999999888766554

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.54  E-value=3.3e-15  Score=99.14  Aligned_cols=111  Identities=13%  Similarity=0.054  Sum_probs=86.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++  +|++++|+.+.++++.+++.     . .++.+|++|++++++++++    ++++|++   +|.. ...++.
T Consensus        17 a~~l~~~--~V~~~~r~~~~~~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~-~~~~~~   83 (207)
T 2yut_A           17 ARALKGH--DLLLSGRRAGALAELAREVG-----A-RALPADLADELEAKALLEE----AGPLDLLVHAVGKA-GRASVR   83 (207)
T ss_dssp             HHHTTTS--EEEEECSCHHHHHHHHHHHT-----C-EECCCCTTSHHHHHHHHHH----HCSEEEEEECCCCC-CCBCSC
T ss_pred             HHHHHhC--CEEEEECCHHHHHHHHHhcc-----C-cEEEeeCCCHHHHHHHHHh----cCCCCEEEECCCcC-CCCChh
Confidence            4567777  99999999888777766652     2 7788999999999998876    6899999   6765 346666


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT  129 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  129 (147)
                      +.+.++|++.+++|+.+++.+++.+    .+.+.++||++||..+..+.++
T Consensus        84 ~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~  130 (207)
T 2yut_A           84 EAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPG  130 (207)
T ss_dssp             C---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTT
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCC
Confidence            7888999999999999999999997    3334589999999887665443

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.50  E-value=1.1e-14  Score=124.47  Aligned_cols=142  Identities=13%  Similarity=0.052  Sum_probs=104.2

Q ss_pred             ccccccCCcEEEEeecChhh-----HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHh----hcCCccEE---ec
Q 040927            2 KRSNQVHYSMGEATTKDEKR-----GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSS----QFGKLDIL---GG   69 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~----~~g~id~l---ag   69 (147)
                      ++.|+++|++|++++|+.+.     ++++.+++...+. ++..+.||++|+++++++++.+.+    .+|++|++   ||
T Consensus      2154 A~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~-~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~fG~IDILVNNAG 2232 (3089)
T 3zen_D         2154 VGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDA-TLWVVPANMASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQ 2232 (3089)
T ss_dssp             HHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTC-EEEEEECCTTCHHHHHHHHHHHTSCCEEEESSSEEEECCCC
T ss_pred             HHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCC-eEEEEEecCCCHHHHHHHHHHHHhhhhhhcCCCCEEEECCC
Confidence            56789999999999998766     6667777765554 688999999999999999999998    89999999   77


Q ss_pred             CCC----cchhhhcccHHHH----HHhHHHhhhhHHHHHHHHHHhhccCCCC----eEEEEcCCCCCC----cCCCchhh
Q 040927           70 LPD----NWYKMLTQTYELA----EKCIQTNYYGNKRMCEALIPLLQLSDSP----RIVNASSSMGKL----KNITNEWA  133 (147)
Q Consensus        70 ~~~----~~~~~~~~~~~~~----~~~~~~n~~~~~~l~~~~~~~l~~~~~~----~iv~isS~~~~~----~~~~~~~~  133 (147)
                      ...    ......+.+.++|    +..+++|+.+++.+++.+.|.|...+.+    .|+++|+..+..    .|..+|++
T Consensus      2233 i~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss~~g~~g~~~aYsASKaA 2312 (3089)
T 3zen_D         2233 TPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSPNRGMFGGDGAYGEAKSA 2312 (3089)
T ss_dssp             CCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECSSTTSCSSCSSHHHHGGG
T ss_pred             cccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCcccccCCCchHHHHHHHH
Confidence            621    1112222333444    4459999999999999999999876532    344455544433    35556777


Q ss_pred             hccccchhhhhcc
Q 040927          134 KGVLSDWMRCRRS  146 (147)
Q Consensus       134 ~~~~~~~~al~~e  146 (147)
                      +..++.  +++.|
T Consensus      2313 l~~Ltr--slA~E 2323 (3089)
T 3zen_D         2313 LDALEN--RWSAE 2323 (3089)
T ss_dssp             HHHHHH--HHHHC
T ss_pred             HHHHHH--HHHhc
Confidence            888887  77766

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.50  E-value=1.5e-15  Score=104.02  Aligned_cols=98  Identities=15%  Similarity=0.178  Sum_probs=77.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++.             . +.+|++|+++++++++++   .+++|++   ||.....    
T Consensus        18 a~~l~~~G~~V~~~~r~~~~~~~-------------~-~~~Dl~~~~~v~~~~~~~---~~~id~lv~~Ag~~~~~----   76 (257)
T 1fjh_A           18 RKVLEAAGHQIVGIDIRDAEVIA-------------D-LSTAEGRKQAIADVLAKC---SKGMDGLVLCAGLGPQT----   76 (257)
T ss_dssp             HHHHHHTTCEEEEEESSSSSEEC-------------C-TTSHHHHHHHHHHHHTTC---TTCCSEEEECCCCCTTC----
T ss_pred             HHHHHHCCCEEEEEeCCchhhcc-------------c-cccCCCCHHHHHHHHHHh---CCCCCEEEECCCCCCCc----
Confidence            46677888888888887653221             1 568999999888877632   2899999   7765311    


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                          +.|++.+++|+.+++.+++.++|.|.+++.|+||++||..+.
T Consensus        77 ----~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  118 (257)
T 1fjh_A           77 ----KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA  118 (257)
T ss_dssp             ----SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred             ----ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence                128999999999999999999999988877999999998877

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.29  E-value=6.9e-13  Score=90.31  Aligned_cols=100  Identities=16%  Similarity=0.060  Sum_probs=76.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++.              .+.+|++|+++++++++++   .+++|++   ||.....    
T Consensus        18 ~~~L~~~g~~V~~~~r~~~~~~~--------------~~~~D~~~~~~~~~~~~~~---~~~~d~vi~~Ag~~~~~----   76 (255)
T 2dkn_A           18 KELLARAGHTVIGIDRGQADIEA--------------DLSTPGGRETAVAAVLDRC---GGVLDGLVCCAGVGVTA----   76 (255)
T ss_dssp             HHHHHHTTCEEEEEESSSSSEEC--------------CTTSHHHHHHHHHHHHHHH---TTCCSEEEECCCCCTTS----
T ss_pred             HHHHHhCCCEEEEEeCChhHccc--------------cccCCcccHHHHHHHHHHc---CCCccEEEECCCCCCcc----
Confidence            45677788888888887643210              1568999999988887754   3789999   6654211    


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                          +.|+..+++|+.+++.+++.++|.|.+.+.++||++||..+..+
T Consensus        77 ----~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~  120 (255)
T 2dkn_A           77 ----ANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQP  120 (255)
T ss_dssp             ----SCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGST
T ss_pred             ----hhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccc
Confidence                23788999999999999999999998877789999999887654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.27  E-value=1.3e-12  Score=90.04  Aligned_cols=93  Identities=24%  Similarity=0.202  Sum_probs=73.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+....+         + .++.++.+|++|++++.++++       .+|++   ||..       
T Consensus        20 a~~L~~~G~~V~~~~r~~~~~~---------~-~~~~~~~~Dl~d~~~~~~~~~-------~~D~vi~~Ag~~-------   75 (267)
T 3rft_A           20 RERLAPMAEILRLADLSPLDPA---------G-PNEECVQCDLADANAVNAMVA-------GCDGIVHLGGIS-------   75 (267)
T ss_dssp             HHHTGGGEEEEEEEESSCCCCC---------C-TTEEEEECCTTCHHHHHHHHT-------TCSEEEECCSCC-------
T ss_pred             HHHHHhcCCEEEEEecCCcccc---------C-CCCEEEEcCCCCHHHHHHHHc-------CCCEEEECCCCc-------
Confidence            5678889999999999865432         2 258999999999999888765       68988   6653       


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                        +.+.|++.+++|+.+++++++++.+.    +.++||++||..+.
T Consensus        76 --~~~~~~~~~~~N~~g~~~l~~a~~~~----~~~~iv~~SS~~~~  115 (267)
T 3rft_A           76 --VEKPFEQILQGNIIGLYNLYEAARAH----GQPRIVFASSNHTI  115 (267)
T ss_dssp             --SCCCHHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGG
T ss_pred             --CcCCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEcchHHh
Confidence              12346889999999999999998543    45799999998765

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.12  E-value=3.9e-11  Score=84.95  Aligned_cols=109  Identities=13%  Similarity=0.027  Sum_probs=79.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.....+..+.+....+.++.++.+|++|++++.++++.     +.+|++   ||.... ..  
T Consensus        22 ~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~-~~--   93 (341)
T 3enk_A           22 AVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HPITAAIHFAALKAV-GE--   93 (341)
T ss_dssp             HHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SCCCEEEECCCCCCH-HH--
T ss_pred             HHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cCCcEEEECcccccc-Cc--
Confidence            5678889999999999876655555555543223588999999999999888865     478988   665522 22  


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                        ..+.....+++|+.++..+++.+.    +.+.++||++||....
T Consensus        94 --~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~  133 (341)
T 3enk_A           94 --SVAKPIEYYRNNLDSLLSLLRVMR----ERAVKRIVFSSSATVY  133 (341)
T ss_dssp             --HHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGB
T ss_pred             --cccChHHHHHHHHHHHHHHHHHHH----hCCCCEEEEEecceEe
Confidence              223345678899999998877754    3445799999996543

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=98.99  E-value=1.1e-09  Score=77.98  Aligned_cols=106  Identities=16%  Similarity=0.175  Sum_probs=79.2

Q ss_pred             ccccccC-Cc-EEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVH-YS-MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~-G~-~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|++. |+ +|++++|+....+++.+++..   .++.++.+|++|.+++.++++       .+|++   ||...  .+
T Consensus        38 ~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~---~~v~~~~~Dl~d~~~l~~~~~-------~~D~Vih~Aa~~~--~~  105 (344)
T 2gn4_A           38 VRKVLDTTNAKKIIVYSRDELKQSEMAMEFND---PRMRFFIGDVRDLERLNYALE-------GVDICIHAAALKH--VP  105 (344)
T ss_dssp             HHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC---TTEEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCC--HH
T ss_pred             HHHHHhhCCCCEEEEEECChhhHHHHHHHhcC---CCEEEEECCCCCHHHHHHHHh-------cCCEEEECCCCCC--CC
Confidence            4567777 97 999999998877776666642   258899999999988876653       68988   66542  22


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                      .   ......+.+++|+.++.++++++.+.    +.++||++||..+..|
T Consensus       106 ~---~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~p  148 (344)
T 2gn4_A          106 I---AEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAANP  148 (344)
T ss_dssp             H---HHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSSC
T ss_pred             c---hhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCCC
Confidence            1   12334678999999999999999875    3468999999776544

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=98.97  E-value=2.2e-09  Score=75.98  Aligned_cols=107  Identities=16%  Similarity=0.024  Sum_probs=78.5

Q ss_pred             ccccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.+.|++|++++|+. .......+.+...+  ++.++.+|++|++++.++++..     ++|++   ||....    
T Consensus        18 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----   86 (347)
T 1orr_A           18 ASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG--NFEFVHGDIRNKNDVTRLITKY-----MPDSCFHLAGQVAM----   86 (347)
T ss_dssp             HHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH----
T ss_pred             HHHHHhCCCEEEEEeCCCccCchhhhhhhccCC--ceEEEEcCCCCHHHHHHHHhcc-----CCCEEEECCcccCh----
Confidence            467888999999998853 22233344454432  5888999999999998887652     68988   665421    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                       ..+.++++..+++|+.++..+++++.+.+.   +++||++||...
T Consensus        87 -~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v  128 (347)
T 1orr_A           87 -TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKV  128 (347)
T ss_dssp             -HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGG
T ss_pred             -hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHH
Confidence             223456788999999999999999998763   268999999653

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.95  E-value=1.3e-09  Score=78.25  Aligned_cols=123  Identities=11%  Similarity=-0.079  Sum_probs=85.2

Q ss_pred             ccc-cCCcEEEEeecChh------------hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---
Q 040927            4 SNQ-VHYSMGEATTKDEK------------RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---   67 (147)
Q Consensus         4 ~l~-~~G~~v~l~~r~~~------------~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---   67 (147)
                      .++ ..|+.+++++++.+            ..+.+.+++++.|. +...+.||++++++++++++++.+.+|++|+|   
T Consensus        69 alAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~-~a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS  147 (401)
T 4ggo_A           69 TAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGL-YSVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYS  147 (401)
T ss_dssp             HHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTC-CEEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             HHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCC-CceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEe
Confidence            355 56899988887542            23456677777887 69999999999999999999999999999999   


Q ss_pred             ecCCCcc------------h---------------------hhhcccHHHHHHhHHH---hhhhHHHHHHHHHHhhccCC
Q 040927           68 GGLPDNW------------Y---------------------KMLTQTYELAEKCIQT---NYYGNKRMCEALIPLLQLSD  111 (147)
Q Consensus        68 ag~~~~~------------~---------------------~~~~~~~~~~~~~~~~---n~~~~~~l~~~~~~~l~~~~  111 (147)
                      ++.....            .                     .+...+.++++.+..+   ...+.+...+...+.|.+  
T Consensus       148 ~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s~~s~w~~al~~a~lla~--  225 (401)
T 4ggo_A          148 LASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGEDWERWIKQLSKEGLLEE--  225 (401)
T ss_dssp             CCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE--
T ss_pred             cccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHhhhcccC--
Confidence            3322100            0                     1122355566555555   445555566666666654  


Q ss_pred             CCeEEEEcCCCCCCcCCC
Q 040927          112 SPRIVNASSSMGKLKNIT  129 (147)
Q Consensus       112 ~~~iv~isS~~~~~~~~~  129 (147)
                      +++++.+|++.+....|.
T Consensus       226 G~siva~SYiGse~t~P~  243 (401)
T 4ggo_A          226 GCITLAYSYIGPEATQAL  243 (401)
T ss_dssp             EEEEEEEECCCCGGGHHH
T ss_pred             CceEEEEeccCcceeecC
Confidence            489999999887665543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=98.95  E-value=1.2e-09  Score=78.15  Aligned_cols=110  Identities=16%  Similarity=0.122  Sum_probs=73.2

Q ss_pred             ccccccCCcEEEEeecChhhHH-HHHHHHHh----cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            2 KRSNQVHYSMGEATTKDEKRGL-AAVEKLKN----SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~-~~~~~l~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      ++.|+++|++|++++|+..... +..+.+..    .+. ++.++.+|++|++++.++++..     ++|++   ||....
T Consensus        18 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~   91 (372)
T 1db3_A           18 AEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNP-KFHLHYGDLSDTSNLTRILREV-----QPDEVYNLGAMSHV   91 (372)
T ss_dssp             HHHHHHTTCEEEEECC---------------------C-CEEECCCCSSCHHHHHHHHHHH-----CCSEEEECCCCCTT
T ss_pred             HHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCC-ceEEEECCCCCHHHHHHHHHhc-----CCCEEEECCcccCc
Confidence            5677889999999999764311 11122211    122 5888899999999998888765     68888   665422


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                           ..+.++++..+++|+.++..+++++.+...+ ++++||++||...
T Consensus        92 -----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v  135 (372)
T 1db3_A           92 -----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSEL  135 (372)
T ss_dssp             -----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGG
T ss_pred             -----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhh
Confidence                 1233456788999999999999999887643 2378999999654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.92  E-value=1e-09  Score=73.96  Aligned_cols=96  Identities=16%  Similarity=0.103  Sum_probs=72.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCce-EEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNV-IFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++..    .   ++ .++.+|++         +.+.+.++.+|++   +|....    
T Consensus        38 ~~~L~~~G~~V~~~~R~~~~~~~~~~----~---~~~~~~~~Dl~---------~~~~~~~~~~D~vi~~ag~~~~----   97 (236)
T 3e8x_A           38 LSELKNKGHEPVAMVRNEEQGPELRE----R---GASDIVVANLE---------EDFSHAFASIDAVVFAAGSGPH----   97 (236)
T ss_dssp             HHHHHHTTCEEEEEESSGGGHHHHHH----T---TCSEEEECCTT---------SCCGGGGTTCSEEEECCCCCTT----
T ss_pred             HHHHHhCCCeEEEEECChHHHHHHHh----C---CCceEEEcccH---------HHHHHHHcCCCEEEECCCCCCC----
Confidence            56788899999999999887655432    1   47 88999998         2344556789998   665421    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                           ++++..+++|+.++.++++++...    +.++||++||..+..+
T Consensus        98 -----~~~~~~~~~n~~~~~~l~~a~~~~----~~~~iv~~SS~~~~~~  137 (236)
T 3e8x_A           98 -----TGADKTILIDLWGAIKTIQEAEKR----GIKRFIMVSSVGTVDP  137 (236)
T ss_dssp             -----SCHHHHHHTTTHHHHHHHHHHHHH----TCCEEEEECCTTCSCG
T ss_pred             -----CCccccchhhHHHHHHHHHHHHHc----CCCEEEEEecCCCCCC
Confidence                 357889999999999999998543    4578999999776554

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.92  E-value=1.7e-09  Score=77.54  Aligned_cols=112  Identities=16%  Similarity=0.077  Sum_probs=76.7

Q ss_pred             ccccccCCcEEEEeecChhh-----HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            2 KRSNQVHYSMGEATTKDEKR-----GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      ++.|.++|++|++++|+...     ++.+.+.+......++.++.+|++|++++.++++.+     ++|++   ||....
T Consensus        41 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~  115 (375)
T 1t2a_A           41 AEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-----KPTEIYNLGAQSHV  115 (375)
T ss_dssp             HHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH
T ss_pred             HHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc-----CCCEEEECCCcccc
Confidence            46678889999999987532     222211111001125788999999999998887765     68888   665422


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                       .    .+.++++..+++|+.++..+++++.+...+ +.++||++||....
T Consensus       116 -~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~  160 (375)
T 1t2a_A          116 -K----ISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELY  160 (375)
T ss_dssp             -H----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGT
T ss_pred             -c----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhh
Confidence             1    234667889999999999999999887542 23789999997654

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=98.91  E-value=1.4e-09  Score=76.74  Aligned_cols=105  Identities=10%  Similarity=0.008  Sum_probs=76.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEE-EecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFH-LLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++|++|++++|+....+.+.+.+....+.++.++ .+|++|.+++.++++       .+|++   ||.... .  
T Consensus        28 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vih~A~~~~~-~--   97 (342)
T 1y1p_A           28 VEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------GAAGVAHIASVVSF-S--   97 (342)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------TCSEEEECCCCCSC-C--
T ss_pred             HHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-------CCCEEEEeCCCCCC-C--
Confidence            467888999999999998776666555543322357877 799999987766543       68888   665422 1  


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                           ++++..+++|+.++..+++++.+.   .+.++||++||....
T Consensus        98 -----~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~  136 (342)
T 1y1p_A           98 -----NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSA  136 (342)
T ss_dssp             -----SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGT
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHh
Confidence                 235678999999999999998752   234789999997654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=98.91  E-value=2.7e-09  Score=75.98  Aligned_cols=106  Identities=15%  Similarity=0.102  Sum_probs=78.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+......+.+.+. .+ .++.++.+|++|++++.++++..     ++|++   ||....     
T Consensus        26 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~-~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~-----   93 (357)
T 1rkx_A           26 SLWLQTMGATVKGYSLTAPTVPSLFETAR-VA-DGMQSEIGDIRDQNKLLESIREF-----QPEIVFHMAAQPLV-----   93 (357)
T ss_dssp             HHHHHHTTCEEEEEESSCSSSSCHHHHTT-TT-TTSEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH-----
T ss_pred             HHHHHhCCCeEEEEeCCCcccchhhHhhc-cC-CceEEEEccccCHHHHHHHHHhc-----CCCEEEECCCCccc-----
Confidence            46778889999999998755444444332 12 25889999999999998887765     68888   554311     


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      ..+.++++..+++|+.++..+++++.+.   ...++||++||..
T Consensus        94 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~  134 (357)
T 1rkx_A           94 RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDK  134 (357)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGG
T ss_pred             ccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHH
Confidence            2345667889999999999999999764   1247899999975

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=98.90  E-value=1.2e-09  Score=77.14  Aligned_cols=101  Identities=10%  Similarity=-0.045  Sum_probs=72.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.....+..+.+     .++.++.+|++|++++.++++++     .+|++   ||.... .   
T Consensus        37 ~~~L~~~g~~V~~~~r~~~~~~~~~~~l-----~~v~~~~~Dl~d~~~~~~~~~~~-----~~D~vih~A~~~~~-~---  102 (330)
T 2pzm_A           37 IEHWLPQGHEILVIDNFATGKREVLPPV-----AGLSVIEGSVTDAGLLERAFDSF-----KPTHVVHSAAAYKD-P---  102 (330)
T ss_dssp             HHHHGGGTCEEEEEECCSSSCGGGSCSC-----TTEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCSC-T---
T ss_pred             HHHHHHCCCEEEEEECCCccchhhhhcc-----CCceEEEeeCCCHHHHHHHHhhc-----CCCEEEECCccCCC-c---
Confidence            5678888999999998654322111111     25888999999999998888764     68888   665422 1   


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                        +.++++  +++|+.++..+++++...    +.++||++||....
T Consensus       103 --~~~~~~--~~~N~~~~~~l~~a~~~~----~~~~iV~~SS~~~~  140 (330)
T 2pzm_A          103 --DDWAED--AATNVQGSINVAKAASKA----GVKRLLNFQTALCY  140 (330)
T ss_dssp             --TCHHHH--HHHHTHHHHHHHHHHHHH----TCSEEEEEEEGGGG
T ss_pred             --cccChh--HHHHHHHHHHHHHHHHHc----CCCEEEEecCHHHh
Confidence              334555  899999999999998753    34789999997654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=98.89  E-value=1.3e-08  Score=73.48  Aligned_cols=109  Identities=15%  Similarity=0.061  Sum_probs=76.4

Q ss_pred             ccccc-cCCcEEEEeecChhh---------HHHHHHHHHhcCC----Cc---eEEEEecCCCHHHHHHHHHHHHhhcCCc
Q 040927            2 KRSNQ-VHYSMGEATTKDEKR---------GLAAVEKLKNSGC----DN---VIFHLLDVTDPASVDSLVHFVSSQFGKL   64 (147)
Q Consensus         2 ~~~l~-~~G~~v~l~~r~~~~---------~~~~~~~l~~~~~----~~---~~~~~~D~~~~~~~~~~~~~~~~~~g~i   64 (147)
                      ++.|+ ++|++|++++|+...         .+.+.+.+....+    .+   +.++.+|++|++++.+++++    ++++
T Consensus        19 ~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~   94 (397)
T 1gy8_A           19 VRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGVFTR----HGPI   94 (397)
T ss_dssp             HHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHHHHH----SCCC
T ss_pred             HHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHHHHHHHh----cCCC
Confidence            45677 889999999987543         3333333333211    13   78899999999988777653    4669


Q ss_pred             cEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           65 DIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        65 d~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                      |++   ||.... .    .+.++++..+++|+.++..+++++..    .+.++||++||...
T Consensus        95 d~vih~A~~~~~-~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~iv~~SS~~v  147 (397)
T 1gy8_A           95 DAVVHMCAFLAV-G----ESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAI  147 (397)
T ss_dssp             CEEEECCCCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGG
T ss_pred             CEEEECCCccCc-C----cchhhHHHHHHHHhHHHHHHHHHHHH----hCCCEEEEECCHHH
Confidence            998   665422 1    13456788999999999999998654    34478999999553

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=98.88  E-value=1.4e-09  Score=76.96  Aligned_cols=106  Identities=15%  Similarity=0.080  Sum_probs=76.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+......  ..+...+ ..++.++.+|++|++++.++++.+     ++|++   ||....    
T Consensus        20 ~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----   88 (345)
T 2z1m_A           20 AKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----QPDEVYNLAAQSFV----   88 (345)
T ss_dssp             HHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH----
T ss_pred             HHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc-----CCCEEEECCCCcch----
Confidence            56788899999999998654321  1222221 125888999999999998888765     68888   665421    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                       +.+.++++..+++|+.++.++++++.+. .  ..++||++||..
T Consensus        89 -~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~--~~~~iv~~SS~~  129 (345)
T 2z1m_A           89 -GVSFEQPILTAEVDAIGVLRILEALRTV-K--PDTKFYQASTSE  129 (345)
T ss_dssp             -HHHTTSHHHHHHHHTHHHHHHHHHHHHH-C--TTCEEEEEEEGG
T ss_pred             -hhhhhCHHHHHHHHHHHHHHHHHHHHHh-C--CCceEEEEechh
Confidence             2234567889999999999999999853 1  137899999975

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=98.87  E-value=2.5e-09  Score=76.89  Aligned_cols=112  Identities=15%  Similarity=0.050  Sum_probs=77.6

Q ss_pred             ccccccCCcEEEEeecChhh-----HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            2 KRSNQVHYSMGEATTKDEKR-----GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      ++.|.++|++|++++|+...     ++.+.+.+...+..++.++.+|++|.+++.++++.+     ++|++   ||....
T Consensus        45 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~  119 (381)
T 1n7h_A           45 TEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-----KPDEVYNLAAQSHV  119 (381)
T ss_dssp             HHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH
T ss_pred             HHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc-----CCCEEEECCcccCc
Confidence            46678889999999987543     222222221111114788899999999998887765     68888   665422


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCC
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMG  123 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~  123 (147)
                           ..+.++++..+++|+.++..+++++.+...++ +.++||++||...
T Consensus       120 -----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~v  165 (381)
T 1n7h_A          120 -----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEM  165 (381)
T ss_dssp             -----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG
T ss_pred             -----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHH
Confidence                 13456678899999999999999999976542 2468999999763

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=98.85  E-value=4e-08  Score=70.95  Aligned_cols=111  Identities=11%  Similarity=-0.023  Sum_probs=76.8

Q ss_pred             ccccccCCcEEEEeecChhhHH----------------HHHHHHH-hcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCc
Q 040927            2 KRSNQVHYSMGEATTKDEKRGL----------------AAVEKLK-NSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKL   64 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~----------------~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   64 (147)
                      ++.|+++|++|++++|+.....                +....+. ..+. ++.++.+|++|++++.++++..     ++
T Consensus        28 ~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~v~~~~~Dl~d~~~~~~~~~~~-----~~  101 (404)
T 1i24_A           28 ALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK-SIELYVGDICDFEFLAESFKSF-----EP  101 (404)
T ss_dssp             HHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCC-CCEEEESCTTSHHHHHHHHHHH-----CC
T ss_pred             HHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCC-ceEEEECCCCCHHHHHHHHhcc-----CC
Confidence            5678889999999988643211                1111111 1232 5889999999999998887664     58


Q ss_pred             cEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           65 DIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        65 d~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                      |++   ||.... . ....+.+++...+++|+.++..+++++.+.-   .+.+||++||...
T Consensus       102 D~Vih~A~~~~~-~-~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~~~~~V~~SS~~v  158 (404)
T 1i24_A          102 DSVVHFGEQRSA-P-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG---EECHLVKLGTMGE  158 (404)
T ss_dssp             SEEEECCSCCCH-H-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC---TTCEEEEECCGGG
T ss_pred             CEEEECCCCCCc-c-chhhCccchhhhHHHHHHHHHHHHHHHHHhC---CCcEEEEeCcHHH
Confidence            888   665422 2 1233567788899999999999999987642   1148999999653

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=98.81  E-value=3.1e-09  Score=74.55  Aligned_cols=99  Identities=17%  Similarity=0.116  Sum_probs=72.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+... +.    +      ++.++.+|++|++++.++++.     +++|++   ||....     
T Consensus        29 ~~~L~~~G~~V~~~~r~~~~-~~----l------~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~-----   87 (321)
T 2pk3_A           29 ANHLTEQNVEVFGTSRNNEA-KL----P------NVEMISLDIMDSQRVKKVISD-----IKPDYIFHLAAKSSV-----   87 (321)
T ss_dssp             HHHHHHTTCEEEEEESCTTC-CC----T------TEEEEECCTTCHHHHHHHHHH-----HCCSEEEECCSCCCH-----
T ss_pred             HHHHHHCCCEEEEEecCCcc-cc----c------eeeEEECCCCCHHHHHHHHHh-----cCCCEEEEcCcccch-----
Confidence            45677788888888887643 11    1      377889999999999888765     468988   665422     


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      ..+.++++..+++|+.++..+++++ +.+.  +.++||++||....
T Consensus        88 ~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~~~~iv~~SS~~v~  130 (321)
T 2pk3_A           88 KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--LDCRILTIGSSEEY  130 (321)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--CCCEEEEEEEGGGT
T ss_pred             hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--CCCeEEEEccHHhc
Confidence            1223457889999999999999999 5552  34789999997643

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=98.81  E-value=5.1e-09  Score=74.22  Aligned_cols=107  Identities=13%  Similarity=0.108  Sum_probs=74.4

Q ss_pred             ccccccCCcEEEEeecChhh------HHHHHHHHHh-cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC
Q 040927            2 KRSNQVHYSMGEATTKDEKR------GLAAVEKLKN-SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP   71 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~------~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~   71 (147)
                      ++.|.++|++|++++|+...      ..+..+++.. .+. ++.++.+|++|++++.++++..     .+|++   ||..
T Consensus        19 ~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~-----~~d~vih~A~~~   92 (348)
T 1ek6_A           19 VLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGR-SVEFEEMDILDQGALQRLFKKY-----SFMAVIHFAGLK   92 (348)
T ss_dssp             HHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTC-CCEEEECCTTCHHHHHHHHHHC-----CEEEEEECCSCC
T ss_pred             HHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCC-ceEEEECCCCCHHHHHHHHHhc-----CCCEEEECCCCc
Confidence            46778889999999875322      2222333332 232 5888999999999888877652     68888   6654


Q ss_pred             CcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           72 DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                      .. ..    +.++++..+++|+.++..+++++..    .+.++||++||...
T Consensus        93 ~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~  135 (348)
T 1ek6_A           93 AV-GE----SVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATV  135 (348)
T ss_dssp             CH-HH----HHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGG
T ss_pred             Cc-cc----hhhchHHHHHHHHHHHHHHHHHHHH----hCCCEEEEECcHHH
Confidence            22 11    3456778999999999999987653    34478999999654

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=98.81  E-value=8.8e-09  Score=73.24  Aligned_cols=107  Identities=12%  Similarity=-0.061  Sum_probs=75.3

Q ss_pred             ccccccCCcEEEEeecChh----hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYSMGEATTKDEK----RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~----~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|.++|++|++++|+..    .++++.+++......++.++.+|++|.+++.++++       .+|++   ||.... 
T Consensus        44 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~~-  115 (352)
T 1sb8_A           44 LETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-------GVDYVLHQAALGSV-  115 (352)
T ss_dssp             HHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-------TCSEEEECCSCCCH-
T ss_pred             HHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-------CCCEEEECCcccCc-
Confidence            4667888999999998653    33333333221101258899999999988877654       68888   665422 


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      .    .+.++++..+++|+.++..+++++.+.    +.++||++||....
T Consensus       116 ~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~  157 (352)
T 1sb8_A          116 P----RSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTY  157 (352)
T ss_dssp             H----HHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGG
T ss_pred             h----hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeccHHhc
Confidence            1    134567889999999999999998763    34789999997654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.80  E-value=1.5e-08  Score=67.63  Aligned_cols=90  Identities=9%  Similarity=-0.028  Sum_probs=66.9

Q ss_pred             ccccc-cCCcEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQ-VHYSMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~-~~G~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+ ++|++|++++|+.+ .++++.    ..+. ++.++.+|++|++++.++++       .+|++   +|..     
T Consensus        22 ~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~~D~~d~~~~~~~~~-------~~d~vv~~ag~~-----   84 (221)
T 3r6d_A           22 TATLLTYTDMHITLYGRQLKTRIPPEI----IDHE-RVTVIEGSFQNPGXLEQAVT-------NAEVVFVGAMES-----   84 (221)
T ss_dssp             HHHHHHHCCCEEEEEESSHHHHSCHHH----HTST-TEEEEECCTTCHHHHHHHHT-------TCSEEEESCCCC-----
T ss_pred             HHHHHhcCCceEEEEecCccccchhhc----cCCC-ceEEEECCCCCHHHHHHHHc-------CCCEEEEcCCCC-----
Confidence            45677 79999999999987 555432    2233 58999999999998887763       57888   5432     


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI  128 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  128 (147)
                                     |+.     ++.+++.|++.+.++||++||..+..+.+
T Consensus        85 ---------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~  116 (221)
T 3r6d_A           85 ---------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFP  116 (221)
T ss_dssp             ---------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSC
T ss_pred             ---------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCC
Confidence                           222     68888888887778999999988766543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=98.77  E-value=8.2e-09  Score=69.83  Aligned_cols=106  Identities=15%  Similarity=0.098  Sum_probs=73.4

Q ss_pred             ccccccC--CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVH--YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~--G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++  |++|++++|+.+..+++       +. ++.++.+|++|++++.++++       .+|++   +|.......
T Consensus        21 ~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~-~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~a~~~~~~~~   85 (253)
T 1xq6_A           21 YKKLKEGSDKFVAKGLVRSAQGKEKI-------GG-EADVFIGDITDADSINPAFQ-------GIDALVILTSAVPKMKP   85 (253)
T ss_dssp             HHHHHHTTTTCEEEEEESCHHHHHHT-------TC-CTTEEECCTTSHHHHHHHHT-------TCSEEEECCCCCCEECT
T ss_pred             HHHHHhcCCCcEEEEEEcCCCchhhc-------CC-CeeEEEecCCCHHHHHHHHc-------CCCEEEEeccccccccc
Confidence            4567777  89999999987654432       22 47789999999988887763       47888   554422110


Q ss_pred             --------hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           77 --------MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        77 --------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                              ..+...+++++.+++|+.++..+++++...    +.++||++||..+..+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~  139 (253)
T 1xq6_A           86 GFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNP  139 (253)
T ss_dssp             TCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCT
T ss_pred             cccccccccchhhccccccceeeeHHHHHHHHHHHHHc----CCCEEEEEcCccCCCC
Confidence                    012233445567899999999999887654    3468999999887543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=98.77  E-value=1.5e-08  Score=71.62  Aligned_cols=108  Identities=13%  Similarity=0.068  Sum_probs=71.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|......+..+.+....+.++.++.+|++|++++.++++.     .++|++   ||.... ..  
T Consensus        17 ~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~D~vih~A~~~~~-~~--   88 (338)
T 1udb_A           17 CVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD-----HAIDTVIHFAGLKAV-GE--   88 (338)
T ss_dssp             HHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH-----TTCSEEEECCSCCCH-HH--
T ss_pred             HHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc-----cCCCEEEECCccCcc-cc--
Confidence            5678889999999876422111122223221112578889999999998887754     268988   665422 21  


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                        ..+++...+++|+.++..+++++..    .+.++||++||...
T Consensus        89 --~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~  127 (338)
T 1udb_A           89 --SVQKPLEYYDNNVNGTLRLISAMRA----ANVKNFIFSSSATV  127 (338)
T ss_dssp             --HHHCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGG
T ss_pred             --chhcHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEEccHHH
Confidence              2344567899999999999887644    24478999999654

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=98.75  E-value=4.1e-09  Score=75.10  Aligned_cols=108  Identities=13%  Similarity=0.054  Sum_probs=76.3

Q ss_pred             ccccccC-CcEEEEeecCh--hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927            2 KRSNQVH-YSMGEATTKDE--KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         2 ~~~l~~~-G~~v~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~   75 (147)
                      ++.|++. |++|++++|+.  ...+.+ .++.. + .++.++.+|++|++++.+++++     +++|++   ||....  
T Consensus        17 ~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~-~-~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~--   86 (361)
T 1kew_A           17 VRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE-S-NRYNFEHADICDSAEITRIFEQ-----YQPDAVMHLAAESHV--   86 (361)
T ss_dssp             HHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT-C-TTEEEEECCTTCHHHHHHHHHH-----HCCSEEEECCSCCCH--
T ss_pred             HHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc-C-CCeEEEECCCCCHHHHHHHHhh-----cCCCEEEECCCCcCh--
Confidence            4556666 79999999864  222221 12211 2 2588999999999999888765     278988   665421  


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-----CCeEEEEcCCC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-----SPRIVNASSSM  122 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~~~iv~isS~~  122 (147)
                         +.+.++++..+++|+.++..+++++.+.|..-+     +++||++||..
T Consensus        87 ---~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~  135 (361)
T 1kew_A           87 ---DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE  135 (361)
T ss_dssp             ---HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG
T ss_pred             ---hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHH
Confidence               234466788999999999999999999875321     25899999964

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=98.71  E-value=4.6e-08  Score=69.42  Aligned_cols=107  Identities=12%  Similarity=0.002  Sum_probs=76.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCC----CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC----DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|.++|++|++++|+........+.+.....    .++.++.+|++|++++.++++       .+|++   ||.... 
T Consensus        42 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~~-  113 (351)
T 3ruf_A           42 LEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-------GVDHVLHQAALGSV-  113 (351)
T ss_dssp             HHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCCH-
T ss_pred             HHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-------CCCEEEECCccCCc-
Confidence            467888999999999976544444444443211    258999999999988877654       68888   554422 


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                          ..+.+++...+++|+.++..+++++...    +.+++|++||....
T Consensus       114 ----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vy  155 (351)
T 3ruf_A          114 ----PRSIVDPITTNATNITGFLNILHAAKNA----QVQSFTYAASSSTY  155 (351)
T ss_dssp             ----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGG
T ss_pred             ----chhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEecHHhc
Confidence                1234566788999999999999998654    34689999997543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=98.71  E-value=3e-09  Score=71.81  Aligned_cols=98  Identities=11%  Similarity=-0.108  Sum_probs=70.0

Q ss_pred             ccccccCCc--EEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYS--MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~--~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|+  +|++++|+.+..++..      . .++.++.+|++|++++.+++       .++|++   +|....   
T Consensus        35 ~~~L~~~G~~~~V~~~~r~~~~~~~~~------~-~~~~~~~~D~~d~~~~~~~~-------~~~d~vi~~ag~~~~---   97 (242)
T 2bka_A           35 LKEILEQGLFSKVTLIGRRKLTFDEEA------Y-KNVNQEVVDFEKLDDYASAF-------QGHDVGFCCLGTTRG---   97 (242)
T ss_dssp             HHHHHHHTCCSEEEEEESSCCCCCSGG------G-GGCEEEECCGGGGGGGGGGG-------SSCSEEEECCCCCHH---
T ss_pred             HHHHHcCCCCCEEEEEEcCCCCccccc------c-CCceEEecCcCCHHHHHHHh-------cCCCEEEECCCcccc---
Confidence            456778898  8999998865432210      1 14788899999998876654       368988   665411   


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL  125 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  125 (147)
                           ...++..+++|+.++..+++++.+    .+.++||++||..+..
T Consensus        98 -----~~~~~~~~~~n~~~~~~~~~~~~~----~~~~~iv~~SS~~~~~  137 (242)
T 2bka_A           98 -----KAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADK  137 (242)
T ss_dssp             -----HHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT
T ss_pred             -----cCCcccceeeeHHHHHHHHHHHHH----CCCCEEEEEccCcCCC
Confidence                 134678899999999998887654    3457899999987654

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=98.69  E-value=1.1e-08  Score=72.38  Aligned_cols=101  Identities=15%  Similarity=0.027  Sum_probs=70.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+.....+   .+...  .++.++.+|++|++++.++++.     +++|++   ||.... .   
T Consensus        38 ~~~L~~~g~~V~~~~r~~~~~~~---~l~~~--~~~~~~~~Dl~d~~~~~~~~~~-----~~~D~vih~A~~~~~-~---  103 (333)
T 2q1w_A           38 AELLLERGDKVVGIDNFATGRRE---HLKDH--PNLTFVEGSIADHALVNQLIGD-----LQPDAVVHTAASYKD-P---  103 (333)
T ss_dssp             HHHHHHTTCEEEEEECCSSCCGG---GSCCC--TTEEEEECCTTCHHHHHHHHHH-----HCCSEEEECCCCCSC-T---
T ss_pred             HHHHHHCCCEEEEEECCCccchh---hHhhc--CCceEEEEeCCCHHHHHHHHhc-----cCCcEEEECceecCC-C---
Confidence            45677889999998887532111   11111  2578899999999998888765     368988   665422 1   


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                        +.++++  +++|+.++..+++++.+.    +.++||++||....
T Consensus       104 --~~~~~~--~~~N~~~~~~l~~a~~~~----~~~~iV~~SS~~~~  141 (333)
T 2q1w_A          104 --DDWYND--TLTNCVGGSNVVQAAKKN----NVGRFVYFQTALCY  141 (333)
T ss_dssp             --TCHHHH--HHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGG
T ss_pred             --ccCChH--HHHHHHHHHHHHHHHHHh----CCCEEEEECcHHHh
Confidence              223444  899999999999999773    34789999996543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.65  E-value=3.7e-08  Score=69.41  Aligned_cols=106  Identities=12%  Similarity=0.014  Sum_probs=73.9

Q ss_pred             ccccccCCcEEEEeecChhhHH-HHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGL-AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++|++|++++|+..... ...+.+. .+ .++.++.+|++|++++.++++..     ++|++   ||.... .  
T Consensus        31 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~-~--  100 (335)
T 1rpn_A           31 AKLLLEKGYRVHGLVARRSSDTRWRLRELG-IE-GDIQYEDGDMADACSVQRAVIKA-----QPQEVYNLAAQSFV-G--  100 (335)
T ss_dssp             HHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CG-GGEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH-H--
T ss_pred             HHHHHHCCCeEEEEeCCCccccccchhhcc-cc-CceEEEECCCCCHHHHHHHHHHc-----CCCEEEECccccch-h--
Confidence            4567888999999999764311 1112221 11 25888999999999998887665     67888   664421 1  


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMG  123 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~  123 (147)
                        .+.++++..+++|+.++..+++++.+.    + .+++|++||...
T Consensus       101 --~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v  141 (335)
T 1rpn_A          101 --ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEM  141 (335)
T ss_dssp             --HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGG
T ss_pred             --hhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHH
Confidence              122346788999999999999998764    2 268999999654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=98.64  E-value=2.2e-08  Score=68.57  Aligned_cols=94  Identities=22%  Similarity=0.183  Sum_probs=70.4

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +++.|.++|++|++++|+.....         .. ++.++.+|++|++++.++++       .+|++   +|.. .    
T Consensus        18 l~~~L~~~g~~V~~~~r~~~~~~---------~~-~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a~~~-~----   75 (267)
T 3ay3_A           18 IRPHLGTLAHEVRLSDIVDLGAA---------EA-HEEIVACDLADAQAVHDLVK-------DCDGIIHLGGVS-V----   75 (267)
T ss_dssp             HGGGGGGTEEEEEECCSSCCCCC---------CT-TEEECCCCTTCHHHHHHHHT-------TCSEEEECCSCC-S----
T ss_pred             HHHHHHhCCCEEEEEeCCCcccc---------CC-CccEEEccCCCHHHHHHHHc-------CCCEEEECCcCC-C----
Confidence            36788899999999999864311         11 47888999999988877653       47888   5544 1    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                          .+.++..+++|+.++..+++++.+.    +.++||++||....
T Consensus        76 ----~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~iv~~SS~~~~  114 (267)
T 3ay3_A           76 ----ERPWNDILQANIIGAYNLYEAARNL----GKPRIVFASSNHTI  114 (267)
T ss_dssp             ----CCCHHHHHHHTHHHHHHHHHHHHHT----TCCEEEEEEEGGGS
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHHh----CCCEEEEeCCHHHh
Confidence                1335788999999999999998753    44789999997654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=98.64  E-value=1.4e-08  Score=67.56  Aligned_cols=93  Identities=15%  Similarity=0.147  Sum_probs=69.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCC-HHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTD-PASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++|++|++++|+.+..+..         .++.++.+|++| ++++.+++       ..+|++   +|....    
T Consensus        17 ~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~-------~~~d~vi~~ag~~~~----   76 (219)
T 3dqp_A           17 LKSLSTTDYQIYAGARKVEQVPQY---------NNVKAVHFDVDWTPEEMAKQL-------HGMDAIINVSGSGGK----   76 (219)
T ss_dssp             HHHHTTSSCEEEEEESSGGGSCCC---------TTEEEEECCTTSCHHHHHTTT-------TTCSEEEECCCCTTS----
T ss_pred             HHHHHHCCCEEEEEECCccchhhc---------CCceEEEecccCCHHHHHHHH-------cCCCEEEECCcCCCC----
Confidence            567889999999999997654322         258999999999 87776654       368988   665421    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                               ..+++|+.++..+++++..    .+.++||++||..+..+.
T Consensus        77 ---------~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~  113 (219)
T 3dqp_A           77 ---------SLLKVDLYGAVKLMQAAEK----AEVKRFILLSTIFSLQPE  113 (219)
T ss_dssp             ---------SCCCCCCHHHHHHHHHHHH----TTCCEEEEECCTTTTCGG
T ss_pred             ---------CcEeEeHHHHHHHHHHHHH----hCCCEEEEECcccccCCC
Confidence                     2678899999998888743    344789999998776543

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=98.64  E-value=1.9e-08  Score=71.21  Aligned_cols=104  Identities=15%  Similarity=0.075  Sum_probs=71.6

Q ss_pred             ccccccCC-------cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC
Q 040927            2 KRSNQVHY-------SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP   71 (147)
Q Consensus         2 ~~~l~~~G-------~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~   71 (147)
                      ++.|.++|       ++|++++|+......      ..+ .++.++.+|++|++++.++++      +.+|++   ||..
T Consensus        31 ~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~-~~~~~~~~Dl~d~~~~~~~~~------~~~d~vih~A~~~   97 (342)
T 2hrz_A           31 TQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFS-GAVDARAADLSAPGEAEKLVE------ARPDVIFHLAAIV   97 (342)
T ss_dssp             HHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCC-SEEEEEECCTTSTTHHHHHHH------TCCSEEEECCCCC
T ss_pred             HHHHHhcCCcccCCCceEEEEEccCCcccc------ccC-CceeEEEcCCCCHHHHHHHHh------cCCCEEEECCccC
Confidence            34556667       677777776532211      112 257888999999998887764      378988   6654


Q ss_pred             CcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCCC
Q 040927           72 DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMGK  124 (147)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~  124 (147)
                      .      ..+.++++..+++|+.++..+++++.+...+. ..++||++||....
T Consensus        98 ~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~  145 (342)
T 2hrz_A           98 S------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVF  145 (342)
T ss_dssp             H------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGC
T ss_pred             c------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhh
Confidence            2      12456788999999999999999988754221 13789999998654

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=98.62  E-value=3.1e-08  Score=70.00  Aligned_cols=98  Identities=12%  Similarity=0.055  Sum_probs=66.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+....++    +..   .++.++.+|++|++++.++++       .+|++   ||...      
T Consensus        30 ~~~L~~~g~~V~~~~r~~~~~~~----l~~---~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~~~~------   89 (342)
T 2x4g_A           30 ARAIRAAGHDLVLIHRPSSQIQR----LAY---LEPECRVAEMLDHAGLERALR-------GLDGVIFSAGYYP------   89 (342)
T ss_dssp             HHHHHHTTCEEEEEECTTSCGGG----GGG---GCCEEEECCTTCHHHHHHHTT-------TCSEEEEC-----------
T ss_pred             HHHHHHCCCEEEEEecChHhhhh----hcc---CCeEEEEecCCCHHHHHHHHc-------CCCEEEECCccCc------
Confidence            45677889999999998654432    111   147888999999988776653       57888   55431      


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                       .+.++++..+++|+.++..+++++.+.    +.+++|++||....
T Consensus        90 -~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~  130 (342)
T 2x4g_A           90 -SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAM  130 (342)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGS
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhh
Confidence             133567888999999999999999875    33689999997654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=98.61  E-value=4.3e-08  Score=71.58  Aligned_cols=101  Identities=12%  Similarity=0.027  Sum_probs=69.4

Q ss_pred             ccccccCCcEEEEeecChh---hHHHHHHHHHhc--------CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---
Q 040927            2 KRSNQVHYSMGEATTKDEK---RGLAAVEKLKNS--------GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~---~~~~~~~~l~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---   67 (147)
                      ++.|.+.|++|++++|+..   ..+++.+.+...        ...++.++.+|++|++++.        .++.+|++   
T Consensus        86 ~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--------~~~~~d~Vih~  157 (427)
T 4f6c_A           86 IEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--------LPENMDTIIHA  157 (427)
T ss_dssp             HHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC--------CSSCCSEEEEC
T ss_pred             HHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC--------CcCCCCEEEEC
Confidence            5677889999999999876   444444444322        1126899999999988876        45789999   


Q ss_pred             ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           68 GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        68 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                      ||...        ..++++..+++|+.++..+++++.+     +.+++|++||...
T Consensus       158 A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~  200 (427)
T 4f6c_A          158 GARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV  200 (427)
T ss_dssp             CCCC---------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGG
T ss_pred             CcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHh
Confidence            55442        1246788899999999999999987     2368999999776

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=98.61  E-value=5.3e-09  Score=74.72  Aligned_cols=103  Identities=19%  Similarity=0.086  Sum_probs=68.3

Q ss_pred             cccccc--CCcEEEEeecChhhHHHH---H---HHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecC
Q 040927            2 KRSNQV--HYSMGEATTKDEKRGLAA---V---EKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL   70 (147)
Q Consensus         2 ~~~l~~--~G~~v~l~~r~~~~~~~~---~---~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~   70 (147)
                      ++.|++  .|++|++++|+.......   .   .........++.++.+|++|++++.++      ....+|++   ||.
T Consensus        27 ~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~------~~~~~D~vih~A~~  100 (362)
T 3sxp_A           27 AFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL------EKLHFDYLFHQAAV  100 (362)
T ss_dssp             HHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH------TTSCCSEEEECCCC
T ss_pred             HHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh------hccCCCEEEECCcc
Confidence            456777  899999998865411100   0   001111122478899999999888776      23579998   664


Q ss_pred             CCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           71 PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      ...       +.++++..+++|+.++..+++++...     +++||++||..
T Consensus       101 ~~~-------~~~~~~~~~~~Nv~gt~~ll~aa~~~-----~~~~V~~SS~~  140 (362)
T 3sxp_A          101 SDT-------TMLNQELVMKTNYQAFLNLLEIARSK-----KAKVIYASSAG  140 (362)
T ss_dssp             CGG-------GCCCHHHHHHHHTHHHHHHHHHHHHT-----TCEEEEEEEGG
T ss_pred             CCc-------cccCHHHHHHHHHHHHHHHHHHHHHc-----CCcEEEeCcHH
Confidence            311       33557889999999999999998542     24599999944

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=98.57  E-value=4.8e-08  Score=65.84  Aligned_cols=88  Identities=11%  Similarity=-0.023  Sum_probs=61.8

Q ss_pred             ccccccCC-cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHY-SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G-~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++| ++|++++|+.+.+++.      .. .++.++.+|++|++++.++++       .+|++   +|.. .    
T Consensus        40 ~~~L~~~G~~~V~~~~R~~~~~~~~------~~-~~~~~~~~Dl~d~~~~~~~~~-------~~D~vv~~a~~~-~----  100 (236)
T 3qvo_A           40 INQLADKQTIKQTLFARQPAKIHKP------YP-TNSQIIMGDVLNHAALKQAMQ-------GQDIVYANLTGE-D----  100 (236)
T ss_dssp             HHHHTTCTTEEEEEEESSGGGSCSS------CC-TTEEEEECCTTCHHHHHHHHT-------TCSEEEEECCST-T----
T ss_pred             HHHHHhCCCceEEEEEcChhhhccc------cc-CCcEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-c----
Confidence            56788999 8999999997654321      11 258899999999998887764       46888   4431 0    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                                        ....++.+++.|++.+.++||++||..+..+
T Consensus       101 ------------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~  131 (236)
T 3qvo_A          101 ------------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDE  131 (236)
T ss_dssp             ------------------HHHHHHHHHHHHHHTTCCEEEEECCCCC---
T ss_pred             ------------------hhHHHHHHHHHHHHcCCCEEEEEecceecCC
Confidence                              0123567788888877789999999876544

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=98.57  E-value=2.9e-08  Score=70.02  Aligned_cols=103  Identities=18%  Similarity=0.095  Sum_probs=71.5

Q ss_pred             ccccccCC--cEEEEeecChh--hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHY--SMGEATTKDEK--RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G--~~v~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|.++|  ++|++++|+..  ..+.+ +++.. + .++.++.+|++|++++.+++       +.+|++   ||.... 
T Consensus        20 ~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~-~-~~~~~~~~Dl~d~~~~~~~~-------~~~d~vih~A~~~~~-   88 (336)
T 2hun_A           20 IRYILEKHPDWEVINIDKLGYGSNPANL-KDLED-D-PRYTFVKGDVADYELVKELV-------RKVDGVVHLAAESHV-   88 (336)
T ss_dssp             HHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTT-C-TTEEEEECCTTCHHHHHHHH-------HTCSEEEECCCCCCH-
T ss_pred             HHHHHHhCCCCEEEEEecCcccCchhHH-hhhcc-C-CceEEEEcCCCCHHHHHHHh-------hCCCEEEECCCCcCh-
Confidence            45566675  89999988631  11211 11211 2 25888999999999888776       368888   665421 


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                          +.+.++++..+++|+.++..+++++.+.   ...++||++||..
T Consensus        89 ----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~  129 (336)
T 2hun_A           89 ----DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDE  129 (336)
T ss_dssp             ----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGG
T ss_pred             ----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHH
Confidence                2244567889999999999999999886   1236899999965

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=98.55  E-value=1.4e-07  Score=66.62  Aligned_cols=107  Identities=13%  Similarity=0.030  Sum_probs=72.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCC--CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC--DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|.++|++|+++.|+.+..++... +.....  .++.++.+|++|++++.++++       .+|++   |+.. ..  
T Consensus        22 ~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~-~~--   90 (337)
T 2c29_D           22 VMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK-------GCTGVFHVATPM-DF--   90 (337)
T ss_dssp             HHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT-------TCSEEEECCCCC-CS--
T ss_pred             HHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc-------CCCEEEEecccc-CC--
Confidence            56788899999999998764333221 111111  147888999999988877653       46887   5533 11  


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL  125 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  125 (147)
                       ...  +..+..+++|+.++.++++++.+..   ..++||++||.++..
T Consensus        91 -~~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~  133 (337)
T 2c29_D           91 -ESK--DPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVN  133 (337)
T ss_dssp             -SCS--SHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTS
T ss_pred             -CCC--ChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcc
Confidence             111  2235689999999999999988753   136899999977543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=98.55  E-value=1e-07  Score=67.55  Aligned_cols=91  Identities=12%  Similarity=0.040  Sum_probs=64.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+...             .++.++.+|++|.+++.++++       .+|++   ||....     
T Consensus        36 ~~~L~~~G~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~~-----   90 (347)
T 4id9_A           36 VAALRTQGRTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAIM-------GVSAVLHLGAFMSW-----   90 (347)
T ss_dssp             HHHHHHTTCCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHHT-------TCSEEEECCCCCCS-----
T ss_pred             HHHHHhCCCEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHHh-------CCCEEEECCcccCc-----
Confidence            34556667777777666532             146778899999988877654       67888   554422     


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                        +.+.++..+++|+.++..+++++..    .+.++||++||...
T Consensus        91 --~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~v  129 (347)
T 4id9_A           91 --APADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEV  129 (347)
T ss_dssp             --SGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGG
T ss_pred             --chhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHH
Confidence              2234588999999999999999865    34468999999543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=98.53  E-value=1.3e-07  Score=73.09  Aligned_cols=108  Identities=14%  Similarity=0.107  Sum_probs=72.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.....+..+.+......++.++.+|++|++++.++++..     .+|++   ||.... ... 
T Consensus        28 ~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-----~~D~Vih~A~~~~~-~~~-  100 (699)
T 1z45_A           28 VVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KIDSVIHFAGLKAV-GES-  100 (699)
T ss_dssp             HHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCCEEEECCSCCCH-HHH-
T ss_pred             HHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-----CCCEEEECCcccCc-Ccc-
Confidence            56788899999999987543222223332211125788999999999888877642     68888   665422 211 


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                         .+.....+++|+.++..+++++...    +.++||++||...
T Consensus       101 ---~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~iV~~SS~~v  138 (699)
T 1z45_A          101 ---TQIPLRYYHNNILGTVVLLELMQQY----NVSKFVFSSSATV  138 (699)
T ss_dssp             ---HHSHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGG
T ss_pred             ---ccCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEECcHHH
Confidence               1233567899999999998876543    3478999999654

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=98.52  E-value=2.7e-07  Score=64.84  Aligned_cols=101  Identities=10%  Similarity=-0.009  Sum_probs=72.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+.....   +.+   .. ++.++.+|++|++++.+++++     +.+|++   ||.... .   
T Consensus        18 ~~~L~~~g~~V~~~~r~~~~~~---~~~---~~-~~~~~~~D~~~~~~~~~~~~~-----~~~d~vih~a~~~~~-~---   81 (330)
T 2c20_A           18 VKKLVDEGLSVVVVDNLQTGHE---DAI---TE-GAKFYNGDLRDKAFLRDVFTQ-----ENIEAVMHFAADSLV-G---   81 (330)
T ss_dssp             HHHHHHTTCEEEEEECCSSCCG---GGS---CT-TSEEEECCTTCHHHHHHHHHH-----SCEEEEEECCCCCCH-H---
T ss_pred             HHHHHhCCCEEEEEeCCCcCch---hhc---CC-CcEEEECCCCCHHHHHHHHhh-----cCCCEEEECCcccCc-c---
Confidence            4667888999999988653321   111   12 478899999999988887765     378888   555422 1   


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                       .+.++++..+++|+.++..+++++..    .+.+++|++||...
T Consensus        82 -~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~  121 (330)
T 2c20_A           82 -VSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAAT  121 (330)
T ss_dssp             -HHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGG
T ss_pred             -ccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCcee
Confidence             13456788999999999999998754    24468999999654

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=98.51  E-value=8e-08  Score=67.14  Aligned_cols=99  Identities=14%  Similarity=0.038  Sum_probs=70.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|......      ..... ++.++.+|++|++++.++++..     .+|++   ||....     
T Consensus        17 ~~~L~~~G~~V~~~~r~~~~~~------~~~~~-~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~-----   79 (311)
T 2p5y_A           17 VEDLLARGLEVAVLDNLATGKR------ENVPK-GVPFFRVDLRDKEGVERAFREF-----RPTHVSHQAAQASV-----   79 (311)
T ss_dssp             HHHHHTTTCEEEEECCCSSCCG------GGSCT-TCCEECCCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH-----
T ss_pred             HHHHHHCCCEEEEEECCCcCch------hhccc-CeEEEECCCCCHHHHHHHHHhc-----CCCEEEECccccCc-----
Confidence            5678889999999988532111      01111 4678899999999998887642     57877   554321     


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS  121 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  121 (147)
                      ..+.++++..+++|+.++..+++++...    +.++||++||.
T Consensus        80 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~----~~~~iv~~SS~  118 (311)
T 2p5y_A           80 KVSVEDPVLDFEVNLLGGLNLLEACRQY----GVEKLVFASTG  118 (311)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCEEEEeCCC
Confidence            1344667889999999999999998643    34689999997

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=98.50  E-value=2.2e-07  Score=61.61  Aligned_cols=90  Identities=12%  Similarity=0.111  Sum_probs=60.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+.+.++++    .   . ++.++.+|++|+++         +.+..+|++   +|....     
T Consensus        17 ~~~L~~~g~~V~~~~R~~~~~~~~----~---~-~~~~~~~D~~d~~~---------~~~~~~d~vi~~ag~~~~-----   74 (221)
T 3ew7_A           17 LEEAKNRGHEVTAIVRNAGKITQT----H---K-DINILQKDIFDLTL---------SDLSDQNVVVDAYGISPD-----   74 (221)
T ss_dssp             HHHHHHTTCEEEEEESCSHHHHHH----C---S-SSEEEECCGGGCCH---------HHHTTCSEEEECCCSSTT-----
T ss_pred             HHHHHhCCCEEEEEEcCchhhhhc----c---C-CCeEEeccccChhh---------hhhcCCCEEEECCcCCcc-----
Confidence            567888999999999998765432    1   2 58899999999887         223578988   655311     


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                               ...+|+.    .++.+++.+++.+.+++|++||..+..+
T Consensus        75 ---------~~~~~~~----~~~~l~~a~~~~~~~~~v~~SS~~~~~~  109 (221)
T 3ew7_A           75 ---------EAEKHVT----SLDHLISVLNGTVSPRLLVVGGAASLQI  109 (221)
T ss_dssp             ---------TTTSHHH----HHHHHHHHHCSCCSSEEEEECCCC----
T ss_pred             ---------ccchHHH----HHHHHHHHHHhcCCceEEEEecceEEEc
Confidence                     1223444    4556666677776789999999876544

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.44  E-value=2e-07  Score=62.17  Aligned_cols=95  Identities=7%  Similarity=-0.062  Sum_probs=67.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+.+.....       . .++.++.+|++|++++.++++       .+|++   +|....     
T Consensus        21 ~~~L~~~g~~V~~~~r~~~~~~~~-------~-~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a~~~~~-----   80 (227)
T 3dhn_A           21 LNEALNRGFEVTAVVRHPEKIKIE-------N-EHLKVKKADVSSLDEVCEVCK-------GADAVISAFNPGWN-----   80 (227)
T ss_dssp             HHHHHTTTCEEEEECSCGGGCCCC-------C-TTEEEECCCTTCHHHHHHHHT-------TCSEEEECCCC--------
T ss_pred             HHHHHHCCCEEEEEEcCcccchhc-------c-CceEEEEecCCCHHHHHHHhc-------CCCEEEEeCcCCCC-----
Confidence            467888999999999987653321       1 258999999999998877764       47888   543311     


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                            ....+++|+.++..+++++...    +.+++|++||..+..+
T Consensus        81 ------~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~  118 (227)
T 3dhn_A           81 ------NPDIYDETIKVYLTIIDGVKKA----GVNRFLMVGGAGSLFI  118 (227)
T ss_dssp             ---------CCSHHHHHHHHHHHHHHHT----TCSEEEEECCSTTSEE
T ss_pred             ------ChhHHHHHHHHHHHHHHHHHHh----CCCEEEEeCChhhccC
Confidence                  0126888999998888887653    3468999999876543

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=98.41  E-value=1.1e-07  Score=67.44  Aligned_cols=101  Identities=22%  Similarity=0.149  Sum_probs=69.4

Q ss_pred             ccccccC--CcEEEEeecChhh-HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927            2 KRSNQVH--YSMGEATTKDEKR-GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         2 ~~~l~~~--G~~v~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~   75 (147)
                      ++.|.++  |++|++++|+... ..+.   +......++.++.+|++|++++.++++       .+|++   ||....  
T Consensus        21 ~~~L~~~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~~--   88 (348)
T 1oc2_A           21 VHYVYNNHPDVHVTVLDKLTYAGNKAN---LEAILGDRVELVVGDIADAELVDKLAA-------KADAIVHYAAESHN--   88 (348)
T ss_dssp             HHHHHHHCTTCEEEEEECCCTTCCGGG---TGGGCSSSEEEEECCTTCHHHHHHHHT-------TCSEEEECCSCCCH--
T ss_pred             HHHHHHhCCCCEEEEEeCCCCCCChhH---HhhhccCCeEEEECCCCCHHHHHHHhh-------cCCEEEECCcccCc--
Confidence            4556666  8999999986421 1111   111111258899999999988877653       34888   665421  


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                         ..+.++++..+++|+.++..+++++.+.    + ++||++||..
T Consensus        89 ---~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~  127 (348)
T 1oc2_A           89 ---DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDE  127 (348)
T ss_dssp             ---HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGG
T ss_pred             ---cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccc
Confidence               2234567789999999999999999876    2 4899999965

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=98.40  E-value=6.5e-07  Score=61.88  Aligned_cols=98  Identities=19%  Similarity=0.169  Sum_probs=72.3

Q ss_pred             EEEEeecChhhHHHHHHHHHhcCCCceEEE---EecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHH
Q 040927           11 MGEATTKDEKRGLAAVEKLKNSGCDNVIFH---LLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYEL   84 (147)
Q Consensus        11 ~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~---~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~   84 (147)
                      +|++++.+..-...+.+.|...|. ++..+   .+|++|++++.++++..     .+|++   ||....     ..+.++
T Consensus        14 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~   82 (292)
T 1vl0_A           14 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQDLDITNVLAVNKFFNEK-----KPNVVINCAAHTAV-----DKCEEQ   82 (292)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTTCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH-----HHHHHC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCC-eEEeccCccCCCCCHHHHHHHHHhc-----CCCEEEECCccCCH-----HHHhcC
Confidence            477888887777888888876653 34444   37999999888877654     68888   665421     223467


Q ss_pred             HHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           85 AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        85 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      ++..+++|+.++..+++++.+.    + .++|++||....
T Consensus        83 ~~~~~~~nv~~~~~l~~a~~~~----~-~~iv~~SS~~v~  117 (292)
T 1vl0_A           83 YDLAYKINAIGPKNLAAAAYSV----G-AEIVQISTDYVF  117 (292)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc----C-CeEEEechHHeE
Confidence            7889999999999999998774    2 389999997543

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=98.38  E-value=1e-07  Score=66.70  Aligned_cols=106  Identities=15%  Similarity=0.092  Sum_probs=67.0

Q ss_pred             ccccccCCcEEEEeec-Chhh---HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYSMGEATTK-DEKR---GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r-~~~~---~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|+++|++|+++.| +.+.   ...+ .++...+ .++.++.+|++|++++.++++       .+|++   |+..   
T Consensus        18 ~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~---   85 (322)
T 2p4h_X           18 IKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGAS-EKLHFFNADLSNPDSFAAAIE-------GCVGIFHTASPI---   85 (322)
T ss_dssp             HHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHH-HHEEECCCCTTCGGGGHHHHT-------TCSEEEECCCCC---
T ss_pred             HHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccC-CceEEEecCCCCHHHHHHHHc-------CCCEEEEcCCcc---
Confidence            5678889999999888 5432   1111 1111101 147788899999998877663       46888   5321   


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL  125 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  125 (147)
                       ..  ...+.++..+++|+.+++++++++.+..   +.++||++||..+..
T Consensus        86 -~~--~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~  130 (322)
T 2p4h_X           86 -DF--AVSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVS  130 (322)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTS
T ss_pred             -cC--CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcc
Confidence             11  1111235689999999999999987652   347899999987543

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=98.38  E-value=3.2e-07  Score=64.74  Aligned_cols=103  Identities=14%  Similarity=0.100  Sum_probs=66.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHH--HHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAA--VEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~--~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|.++|++|+++.|+.+...+.  ...+.. . .++.++.+|++|++++.++++       .+|++   ||.. ... 
T Consensus        26 ~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~d~~~~~~~~~-------~~D~Vih~A~~~-~~~-   94 (338)
T 2rh8_A           26 VKLLLQKGYAVNTTVRDPDNQKKVSHLLELQE-L-GDLKIFRADLTDELSFEAPIA-------GCDFVFHVATPV-HFA-   94 (338)
T ss_dssp             HHHHHHTTCEEEEEESCTTCTTTTHHHHHHGG-G-SCEEEEECCTTTSSSSHHHHT-------TCSEEEEESSCC-CC--
T ss_pred             HHHHHHCCCEEEEEEcCcchhhhHHHHHhcCC-C-CcEEEEecCCCChHHHHHHHc-------CCCEEEEeCCcc-CCC-
Confidence            567888999999988876532211  123321 2 247888999999988876653       46888   5533 111 


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                          ..+..++.+++|+.++.++++++.+..   +.++||++||.+
T Consensus        95 ----~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~  133 (338)
T 2rh8_A           95 ----SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAA  133 (338)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHH
T ss_pred             ----CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHH
Confidence                111224588999999999999988653   236899999976

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=98.38  E-value=2.3e-07  Score=65.49  Aligned_cols=103  Identities=12%  Similarity=0.036  Sum_probs=70.5

Q ss_pred             ccccccC---C---cEEEEeecChh--hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecC
Q 040927            2 KRSNQVH---Y---SMGEATTKDEK--RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL   70 (147)
Q Consensus         2 ~~~l~~~---G---~~v~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~   70 (147)
                      ++.|.++   |   ++|++++|+..  ..+.+ +.+.. + .++.++.+|++|++++.+++       ..+|++   ||.
T Consensus        17 ~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~~-~-~~~~~~~~Dl~d~~~~~~~~-------~~~d~Vih~A~~   86 (337)
T 1r6d_A           17 VRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVDA-D-PRLRFVHGDIRDAGLLAREL-------RGVDAIVHFAAE   86 (337)
T ss_dssp             HHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGTT-C-TTEEEEECCTTCHHHHHHHT-------TTCCEEEECCSC
T ss_pred             HHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhccc-C-CCeEEEEcCCCCHHHHHHHh-------cCCCEEEECCCc
Confidence            4456665   7   99999998642  11111 11211 2 25889999999998877665       478988   665


Q ss_pred             CCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           71 PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                      ...     ..+.++++..+++|+.++..+++++.+..    .++||++||...
T Consensus        87 ~~~-----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~----~~~~v~~SS~~v  130 (337)
T 1r6d_A           87 SHV-----DRSIAGASVFTETNVQGTQTLLQCAVDAG----VGRVVHVSTNQV  130 (337)
T ss_dssp             CCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHTT----CCEEEEEEEGGG
T ss_pred             cCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHcC----CCEEEEecchHH
Confidence            421     12345667889999999999999998752    368999999653

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=98.34  E-value=7.3e-06  Score=55.95  Aligned_cols=93  Identities=16%  Similarity=0.084  Sum_probs=68.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|. +|++|++++|+...        .   . .   +.+|++|++++.++++..     ++|++   ||....     
T Consensus        17 ~~~L~-~g~~V~~~~r~~~~--------~---~-~---~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~-----   70 (273)
T 2ggs_A           17 SRLLS-ERHEVIKVYNSSEI--------Q---G-G---YKLDLTDFPRLEDFIIKK-----RPDVIINAAAMTDV-----   70 (273)
T ss_dssp             HHHHT-TTSCEEEEESSSCC--------T---T-C---EECCTTSHHHHHHHHHHH-----CCSEEEECCCCCCH-----
T ss_pred             HHHHh-cCCeEEEecCCCcC--------C---C-C---ceeccCCHHHHHHHHHhc-----CCCEEEECCcccCh-----
Confidence            34555 37888888887531        0   1 2   789999999998888764     68888   665422     


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL  125 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  125 (147)
                      ..+.++++..+++|+.++..+++++.+.    + ++||++||..+..
T Consensus        71 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~iv~~SS~~~~~  112 (273)
T 2ggs_A           71 DKCEIEKEKAYKINAEAVRHIVRAGKVI----D-SYIVHISTDYVFD  112 (273)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CEEEEEEEGGGSC
T ss_pred             hhhhhCHHHHHHHhHHHHHHHHHHHHHh----C-CeEEEEecceeEc
Confidence            1234678899999999999999998752    2 5899999987653

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=98.33  E-value=2e-07  Score=66.94  Aligned_cols=101  Identities=13%  Similarity=0.028  Sum_probs=67.3

Q ss_pred             ccccccCC-cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHY-SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G-~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++| ++|++++|+.....+   .+. .. .++.++.+|++|++++.+++       ..+|++   ||.... .  
T Consensus        49 ~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~~-~~v~~~~~Dl~d~~~l~~~~-------~~~d~Vih~A~~~~~-~--  113 (377)
T 2q1s_A           49 VKRLLELGVNQVHVVDNLLSAEKI---NVP-DH-PAVRFSETSITDDALLASLQ-------DEYDYVFHLATYHGN-Q--  113 (377)
T ss_dssp             HHHHHHTTCSEEEEECCCTTCCGG---GSC-CC-TTEEEECSCTTCHHHHHHCC-------SCCSEEEECCCCSCH-H--
T ss_pred             HHHHHHcCCceEEEEECCCCCchh---hcc-CC-CceEEEECCCCCHHHHHHHh-------hCCCEEEECCCccCc-h--
Confidence            45677778 888888886543211   111 12 25888999999988776554       268888   554422 1  


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMG  123 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~  123 (147)
                        .+.++++..+++|+.++..+++++..    . +.+++|++||...
T Consensus       114 --~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~v  154 (377)
T 2q1s_A          114 --SSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCS  154 (377)
T ss_dssp             --HHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC--
T ss_pred             --hhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHH
Confidence              23456788999999999999998743    2 3468999999653

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=98.33  E-value=3.2e-07  Score=65.58  Aligned_cols=98  Identities=13%  Similarity=0.078  Sum_probs=69.4

Q ss_pred             ccccccC-CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC-CHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVH-YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT-DPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~-G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|.++ |++|++++|+.+......    ..  .++.++.+|++ |.+++.++++       .+|++   ||.... . 
T Consensus        41 ~~~L~~~~g~~V~~~~r~~~~~~~~~----~~--~~v~~~~~Dl~~d~~~~~~~~~-------~~d~Vih~A~~~~~-~-  105 (372)
T 3slg_A           41 SKRILETTDWEVFGMDMQTDRLGDLV----KH--ERMHFFEGDITINKEWVEYHVK-------KCDVILPLVAIATP-A-  105 (372)
T ss_dssp             HHHHHHHSSCEEEEEESCCTTTGGGG----GS--TTEEEEECCTTTCHHHHHHHHH-------HCSEEEECBCCCCH-H-
T ss_pred             HHHHHhCCCCEEEEEeCChhhhhhhc----cC--CCeEEEeCccCCCHHHHHHHhc-------cCCEEEEcCccccH-H-
Confidence            4556666 899999998865433221    11  25899999999 8888887765       47888   665522 1 


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                         ...++....+++|+.++..+++++...    + +++|++||..
T Consensus       106 ---~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~  143 (372)
T 3slg_A          106 ---TYVKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSE  143 (372)
T ss_dssp             ---HHHHCHHHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGG
T ss_pred             ---HHhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHH
Confidence               123455678899999999999988654    3 6899999954

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=98.33  E-value=3e-07  Score=66.12  Aligned_cols=100  Identities=15%  Similarity=-0.021  Sum_probs=68.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+.......      .. .++.++.+|++|++++.++++       .+|++   ||.... ... 
T Consensus        46 ~~~L~~~g~~V~~~~r~~~~~~~~------~~-~~v~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~~-~~~-  109 (379)
T 2c5a_A           46 ARRLKHEGHYVIASDWKKNEHMTE------DM-FCDEFHLVDLRVMENCLKVTE-------GVDHVFNLAADMGG-MGF-  109 (379)
T ss_dssp             HHHHHHTTCEEEEEESSCCSSSCG------GG-TCSEEEECCTTSHHHHHHHHT-------TCSEEEECCCCCCC-HHH-
T ss_pred             HHHHHHCCCeEEEEECCCccchhh------cc-CCceEEECCCCCHHHHHHHhC-------CCCEEEECceecCc-ccc-
Confidence            456677788888888765432110      11 147888999999988877653       67888   565422 111 


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                        +.++++..+++|+.++..+++++...    +.++||++||...
T Consensus       110 --~~~~~~~~~~~Nv~g~~~ll~a~~~~----~~~~~V~~SS~~v  148 (379)
T 2c5a_A          110 --IQSNHSVIMYNNTMISFNMIEAARIN----GIKRFFYASSACI  148 (379)
T ss_dssp             --HTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEEEEGGG
T ss_pred             --cccCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEeehhe
Confidence              12456788999999999999998653    3468999999654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=98.31  E-value=3.2e-06  Score=58.97  Aligned_cols=93  Identities=11%  Similarity=0.088  Sum_probs=43.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+...            . +  ++.+|++|++++.++++..     ++|++   ||....     
T Consensus        19 ~~~L~~~g~~V~~~~r~~~~------------~-~--~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~-----   73 (315)
T 2ydy_A           19 HKEFQQNNWHAVGCGFRRAR------------P-K--FEQVNLLDSNAVHHIIHDF-----QPHVIVHCAAERRP-----   73 (315)
T ss_dssp             HHHHHTTTCEEEEEC---------------------------------CHHHHHHH-----CCSEEEECC----------
T ss_pred             HHHHHhCCCeEEEEccCCCC------------C-C--eEEecCCCHHHHHHHHHhh-----CCCEEEECCcccCh-----
Confidence            34566677777777765432            1 1  5668999998888877654     67888   654422     


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      ..+.++++..+++|+.++..+++++.+.    + +++|++||....
T Consensus        74 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~  114 (315)
T 2ydy_A           74 DVVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVF  114 (315)
T ss_dssp             --------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGS
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHc
Confidence            1245678899999999999999999874    2 589999997754

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=98.30  E-value=5e-07  Score=60.06  Aligned_cols=92  Identities=14%  Similarity=-0.013  Sum_probs=62.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+.++    .  . .++.++.+|++|+++         +.++.+|++   +|......   
T Consensus        17 ~~~L~~~g~~V~~~~R~~~~~~~~----~--~-~~~~~~~~D~~d~~~---------~~~~~~d~vi~~ag~~~~~~---   77 (224)
T 3h2s_A           17 VAEARRRGHEVLAVVRDPQKAADR----L--G-ATVATLVKEPLVLTE---------ADLDSVDAVVDALSVPWGSG---   77 (224)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHH----T--C-TTSEEEECCGGGCCH---------HHHTTCSEEEECCCCCTTSS---
T ss_pred             HHHHHHCCCEEEEEEecccccccc----c--C-CCceEEecccccccH---------hhcccCCEEEECCccCCCcc---
Confidence            567888999999999998765432    1  2 258899999999887         233578988   66541100   


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                               ...+|+.++    +.+++.+++.+ +++|++||..+..+
T Consensus        78 ---------~~~~n~~~~----~~l~~a~~~~~-~~~v~~SS~~~~~~  111 (224)
T 3h2s_A           78 ---------RGYLHLDFA----THLVSLLRNSD-TLAVFILGSASLAM  111 (224)
T ss_dssp             ---------CTHHHHHHH----HHHHHTCTTCC-CEEEEECCGGGSBC
T ss_pred             ---------hhhHHHHHH----HHHHHHHHHcC-CcEEEEecceeecc
Confidence                     124566555    55566677776 89999999765543

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=98.30  E-value=3.8e-07  Score=63.75  Aligned_cols=98  Identities=13%  Similarity=0.067  Sum_probs=65.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|+.|++..++....+.       .. ..+.++.+|++| +++.++++       .+|++   ||....     
T Consensus        18 ~~~L~~~g~~v~~~~~~~~~~~~-------~~-~~~~~~~~Dl~~-~~~~~~~~-------~~d~vih~a~~~~~-----   76 (313)
T 3ehe_A           18 VDKLSESNEIVVIDNLSSGNEEF-------VN-EAARLVKADLAA-DDIKDYLK-------GAEEVWHIAANPDV-----   76 (313)
T ss_dssp             HHHHTTTSCEEEECCCSSCCGGG-------SC-TTEEEECCCTTT-SCCHHHHT-------TCSEEEECCCCCCC-----
T ss_pred             HHHHHhCCCEEEEEcCCCCChhh-------cC-CCcEEEECcCCh-HHHHHHhc-------CCCEEEECCCCCCh-----
Confidence            46678888656665555432211       12 258889999998 77776653       67887   553311     


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      ..+.++++..+++|+.++..+++++...    +.++||++||....
T Consensus        77 ~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~iv~~SS~~vy  118 (313)
T 3ehe_A           77 RIGAENPDEIYRNNVLATYRLLEAMRKA----GVSRIVFTSTSTVY  118 (313)
T ss_dssp             C-CCCCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEECCGGGG
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEeCchHHh
Confidence            2334567889999999999999986543    44789999996643

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.28  E-value=3.2e-07  Score=58.27  Aligned_cols=68  Identities=12%  Similarity=0.067  Sum_probs=53.3

Q ss_pred             ccccccCCcEEEEeecChhhHH---HHHHHHHhcCCCceEEEEecCCCH--HHHHHHHHHHHhhcCCccEE---ecCC
Q 040927            2 KRSNQVHYSMGEATTKDEKRGL---AAVEKLKNSGCDNVIFHLLDVTDP--ASVDSLVHFVSSQFGKLDIL---GGLP   71 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~---~~~~~l~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~l---ag~~   71 (147)
                      ++.|++.|++|++..|+.....   +..+.++..|. ++..+.+|++++  ++++++++.+.+.+|+ |++   +|..
T Consensus        33 a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~-~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnnAgg~  108 (157)
T 3gxh_A           33 FSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGM-DYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHCLANY  108 (157)
T ss_dssp             HHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTC-EEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEECSBSH
T ss_pred             HHHHHHcCCCEEEECCCcccccccccHHHHHHHcCC-eEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEECCCCC
Confidence            3567889999999988754432   23555666665 688899999999  9999999999998999 999   6643

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=98.28  E-value=9.7e-06  Score=57.27  Aligned_cols=74  Identities=12%  Similarity=0.144  Sum_probs=53.0

Q ss_pred             ceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC
Q 040927           36 NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS  112 (147)
Q Consensus        36 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  112 (147)
                      ++.++.+|++|++++.++++..     ++|++   ||....     ..+.++++..+++|+.++..+++++...    +.
T Consensus        76 ~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~  141 (346)
T 4egb_A           76 NYYFVKGEIQNGELLEHVIKER-----DVQVIVNFAAESHV-----DRSIENPIPFYDTNVIGTVTLLELVKKY----PH  141 (346)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHH-----TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS----TT
T ss_pred             CeEEEEcCCCCHHHHHHHHhhc-----CCCEEEECCcccch-----hhhhhCHHHHHHHHHHHHHHHHHHHHhc----CC
Confidence            5788999999999998888763     58888   555422     1234567788999999999999998654    34


Q ss_pred             CeEEEEcCCCC
Q 040927          113 PRIVNASSSMG  123 (147)
Q Consensus       113 ~~iv~isS~~~  123 (147)
                      +++|++||...
T Consensus       142 ~~~v~~SS~~v  152 (346)
T 4egb_A          142 IKLVQVSTDEV  152 (346)
T ss_dssp             SEEEEEEEGGG
T ss_pred             CEEEEeCchHH
Confidence            67999999654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=98.27  E-value=7e-07  Score=62.38  Aligned_cols=96  Identities=16%  Similarity=0.067  Sum_probs=68.4

Q ss_pred             ccccccC--CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVH--YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~--G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|.++  |++|++++|+....+            ++.++.+|++|++++.++++.     ..+|++   ||....   
T Consensus        16 ~~~L~~~~~g~~V~~~~r~~~~~~------------~~~~~~~D~~d~~~~~~~~~~-----~~~d~vih~a~~~~~---   75 (317)
T 3ajr_A           16 VPYLAEKYGKKNVIASDIVQRDTG------------GIKFITLDVSNRDEIDRAVEK-----YSIDAIFHLAGILSA---   75 (317)
T ss_dssp             HHHHHHHHCGGGEEEEESSCCCCT------------TCCEEECCTTCHHHHHHHHHH-----TTCCEEEECCCCCHH---
T ss_pred             HHHHHHhcCCCEEEEecCCCcccc------------CceEEEecCCCHHHHHHHHhh-----cCCcEEEECCcccCC---
Confidence            3456666  788888887654311            256788999999998887764     268888   554311   


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                         ...++++..+++|+.++..+++++.+.    +.+++|++||....
T Consensus        76 ---~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~  116 (317)
T 3ajr_A           76 ---KGEKDPALAYKVNMNGTYNILEAAKQH----RVEKVVIPSTIGVF  116 (317)
T ss_dssp             ---HHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEEEGGGC
T ss_pred             ---ccccChHHHhhhhhHHHHHHHHHHHHc----CCCEEEEecCHHHh
Confidence               123456788999999999999988653    34689999997654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=98.24  E-value=1.1e-07  Score=66.39  Aligned_cols=98  Identities=13%  Similarity=-0.043  Sum_probs=68.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+.....+..      . ..+.++.+|++|.+ +.+.+       .. |++   ||....     
T Consensus        17 ~~~L~~~g~~V~~~~r~~~~~~~~~------~-~~~~~~~~Dl~d~~-~~~~~-------~~-d~vih~A~~~~~-----   75 (312)
T 3ko8_A           17 VDKLVELGYEVVVVDNLSSGRREFV------N-PSAELHVRDLKDYS-WGAGI-------KG-DVVFHFAANPEV-----   75 (312)
T ss_dssp             HHHHHHTTCEEEEECCCSSCCGGGS------C-TTSEEECCCTTSTT-TTTTC-------CC-SEEEECCSSCSS-----
T ss_pred             HHHHHhCCCEEEEEeCCCCCchhhc------C-CCceEEECccccHH-HHhhc-------CC-CEEEECCCCCCc-----
Confidence            5678889999999998764322211      2 25888999999987 54433       22 888   664322     


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      ..+.++++..+++|+.++.++++++...    +.++||++||....
T Consensus        76 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~iv~~SS~~vy  117 (312)
T 3ko8_A           76 RLSTTEPIVHFNENVVATFNVLEWARQT----GVRTVVFASSSTVY  117 (312)
T ss_dssp             SGGGSCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGG
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeCcHHHh
Confidence            2344566788999999999999998553    34689999996643

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=98.22  E-value=1.2e-06  Score=61.80  Aligned_cols=99  Identities=12%  Similarity=0.000  Sum_probs=67.8

Q ss_pred             ccccccC-CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCH-HHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVH-YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP-ASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~-G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|.++ |++|++++|+....+.+    .. . .++.++.+|++|. +.+.++++       .+|++   ||...+ ..
T Consensus        17 ~~~L~~~~g~~V~~~~r~~~~~~~~----~~-~-~~~~~~~~D~~~~~~~~~~~~~-------~~d~vih~A~~~~~-~~   82 (345)
T 2bll_A           17 TERLLREDHYEVYGLDIGSDAISRF----LN-H-PHFHFVEGDISIHSEWIEYHVK-------KCDVVLPLVAIATP-IE   82 (345)
T ss_dssp             HHHHHHSTTCEEEEEESCCGGGGGG----TT-C-TTEEEEECCTTTCSHHHHHHHH-------HCSEEEECBCCCCH-HH
T ss_pred             HHHHHHhCCCEEEEEeCCcchHHHh----hc-C-CCeEEEeccccCcHHHHHhhcc-------CCCEEEEcccccCc-cc
Confidence            4567776 89999999987654322    11 1 2588999999984 45555543       46887   665422 11


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                          ..++++..+++|+.++..+++++...    + +++|++||...
T Consensus        83 ----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~SS~~v  120 (345)
T 2bll_A           83 ----YTRNPLRVFELDFEENLRIIRYCVKY----R-KRIIFPSTSEV  120 (345)
T ss_dssp             ----HHHSHHHHHHHHTHHHHHHHHHHHHT----T-CEEEEECCGGG
T ss_pred             ----hhcCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEEecHHH
Confidence                12456778999999999999988653    3 68999999654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=98.20  E-value=1.6e-06  Score=59.70  Aligned_cols=98  Identities=17%  Similarity=0.159  Sum_probs=70.6

Q ss_pred             EEEEeecChhhHHHHHHHHHhcCCCceEEE---EecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHH
Q 040927           11 MGEATTKDEKRGLAAVEKLKNSGCDNVIFH---LLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYEL   84 (147)
Q Consensus        11 ~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~---~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~   84 (147)
                      +|++++.+..-...+.+.|.+.|. ++..+   .+|++|.+++.++++..     ++|++   ||.... .    ...++
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~D~~d~~~~~~~~~~~-----~~d~vi~~a~~~~~-~----~~~~~   75 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDKKLLDITNISQVQQVVQEI-----RPHIIIHCAAYTKV-D----QAEKE   75 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTE-EEEEECTTTSCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH-H----HHTTC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEecccccCCCCHHHHHHHHHhc-----CCCEEEECCcccCh-H----HHhcC
Confidence            577888777777777777766653 34443   37999999998888765     67888   565422 1    12245


Q ss_pred             HHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           85 AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        85 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      ++..+++|+.++..+++++.+.    + .++|++||....
T Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~SS~~vy  110 (287)
T 3sc6_A           76 RDLAYVINAIGARNVAVASQLV----G-AKLVYISTDYVF  110 (287)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchhhhc
Confidence            6788999999999999998664    2 479999997543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=98.16  E-value=1.2e-06  Score=57.34  Aligned_cols=93  Identities=15%  Similarity=0.069  Sum_probs=64.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+.+..+..      .. .++.++.+|++|++++.++++       .+|++   +|.... .   
T Consensus        20 ~~~l~~~g~~V~~~~r~~~~~~~~------~~-~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~~~~~-~---   81 (206)
T 1hdo_A           20 LAQAVQAGYEVTVLVRDSSRLPSE------GP-RPAHVVVGDVLQAADVDKTVA-------GQDAVIVLLGTRND-L---   81 (206)
T ss_dssp             HHHHHHTTCEEEEEESCGGGSCSS------SC-CCSEEEESCTTSHHHHHHHHT-------TCSEEEECCCCTTC-C---
T ss_pred             HHHHHHCCCeEEEEEeChhhcccc------cC-CceEEEEecCCCHHHHHHHHc-------CCCEEEECccCCCC-C---
Confidence            466788899999999987653211      12 258899999999988877653       46888   554422 0   


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                        +      ..++|+.++..+++++...    +.+++|++||....
T Consensus        82 --~------~~~~n~~~~~~~~~~~~~~----~~~~~v~~Ss~~~~  115 (206)
T 1hdo_A           82 --S------PTTVMSEGARNIVAAMKAH----GVDKVVACTSAFLL  115 (206)
T ss_dssp             --S------CCCHHHHHHHHHHHHHHHH----TCCEEEEECCGGGT
T ss_pred             --C------ccchHHHHHHHHHHHHHHh----CCCeEEEEeeeeec
Confidence              1      1247888888888877653    34689999997544

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=98.16  E-value=1.1e-06  Score=61.20  Aligned_cols=99  Identities=12%  Similarity=-0.026  Sum_probs=69.9

Q ss_pred             ccccccC--CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVH--YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~--G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|.++  |++|++++|+....+     +..    ++.++.+|++|++++.+++++.     .+|++   ||.... . 
T Consensus        19 ~~~L~~~~~g~~V~~~~r~~~~~~-----~~~----~~~~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~-~-   82 (312)
T 2yy7_A           19 TQKLRKLYGTENVIASDIRKLNTD-----VVN----SGPFEVVNALDFNQIEHLVEVH-----KITDIYLMAALLSA-T-   82 (312)
T ss_dssp             HHHHHHHHCGGGEEEEESCCCSCH-----HHH----SSCEEECCTTCHHHHHHHHHHT-----TCCEEEECCCCCHH-H-
T ss_pred             HHHHHHhCCCCEEEEEcCCCcccc-----ccC----CCceEEecCCCHHHHHHHHhhc-----CCCEEEECCccCCC-c-
Confidence            4556666  889999988765421     111    3668899999999888877643     68888   554311 1 


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                          ..++++..+++|+.++..+++++.+.    +.+++|++||....
T Consensus        83 ----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~  122 (312)
T 2yy7_A           83 ----AEKNPAFAWDLNMNSLFHVLNLAKAK----KIKKIFWPSSIAVF  122 (312)
T ss_dssp             ----HHHCHHHHHHHHHHHHHHHHHHHHTT----SCSEEECCEEGGGC
T ss_pred             ----hhhChHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeccHHHh
Confidence                12456788999999999999988652    34689999997643

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.14  E-value=2.5e-07  Score=61.13  Aligned_cols=92  Identities=5%  Similarity=-0.121  Sum_probs=61.4

Q ss_pred             cccccCCc--EEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            3 RSNQVHYS--MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         3 ~~l~~~G~--~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +.|.++|+  +|++++|+...          .. .++.++.+|++|++++.+++         +|++   +|....    
T Consensus        23 ~~l~~~g~~~~V~~~~r~~~~----------~~-~~~~~~~~D~~~~~~~~~~~---------~d~vi~~a~~~~~----   78 (215)
T 2a35_A           23 DRILSEPTLAKVIAPARKALA----------EH-PRLDNPVGPLAELLPQLDGS---------IDTAFCCLGTTIK----   78 (215)
T ss_dssp             HHHHHCTTCCEEECCBSSCCC----------CC-TTEECCBSCHHHHGGGCCSC---------CSEEEECCCCCHH----
T ss_pred             HHHHhCCCCCeEEEEeCCCcc----------cC-CCceEEeccccCHHHHHHhh---------hcEEEECeeeccc----
Confidence            45556666  66666666543          01 24667778888776655443         7888   554311    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL  125 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  125 (147)
                         +.++++..+++|+.++..+++++.+.    +.+++|++||.....
T Consensus        79 ---~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~  119 (215)
T 2a35_A           79 ---EAGSEEAFRAVDFDLPLAVGKRALEM----GARHYLVVSALGADA  119 (215)
T ss_dssp             ---HHSSHHHHHHHHTHHHHHHHHHHHHT----TCCEEEEECCTTCCT
T ss_pred             ---cCCCHHHHHHhhHHHHHHHHHHHHHc----CCCEEEEECCcccCC
Confidence               13456788899999999999997653    346899999977653

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.11  E-value=2.9e-06  Score=63.26  Aligned_cols=101  Identities=12%  Similarity=0.031  Sum_probs=69.1

Q ss_pred             ccccccCCcEEEEeecChh---hHHHHHHHHHhc--------CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---
Q 040927            2 KRSNQVHYSMGEATTKDEK---RGLAAVEKLKNS--------GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~---~~~~~~~~l~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---   67 (147)
                      ++.|.+.|++|+++.|+..   ..+++.+.+...        ...++.++.+|+++++++.        ....+|++   
T Consensus       167 ~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--------~~~~~D~Vih~  238 (508)
T 4f6l_B          167 IEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--------LPENMDTIIHA  238 (508)
T ss_dssp             HHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--------CSSCCSEEEEC
T ss_pred             HHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--------CccCCCEEEEC
Confidence            4567888999999999876   333443433221        1236999999999987776        34688998   


Q ss_pred             ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           68 GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        68 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                      |+....        ...++..+++|+.++..+++++.+     ..+++|++||...
T Consensus       239 Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~v  281 (508)
T 4f6l_B          239 GARTDH--------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV  281 (508)
T ss_dssp             CCC----------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCT
T ss_pred             CceecC--------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhh
Confidence            554311        234577889999999999999865     2378999999776

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=98.08  E-value=3.3e-06  Score=62.60  Aligned_cols=101  Identities=11%  Similarity=0.050  Sum_probs=65.6

Q ss_pred             ccccccC---CcEEEEeecChhhHHHHHHHHHh---------------cCCCceEEEEecCCCH------HHHHHHHHHH
Q 040927            2 KRSNQVH---YSMGEATTKDEKRGLAAVEKLKN---------------SGCDNVIFHLLDVTDP------ASVDSLVHFV   57 (147)
Q Consensus         2 ~~~l~~~---G~~v~l~~r~~~~~~~~~~~l~~---------------~~~~~~~~~~~D~~~~------~~~~~~~~~~   57 (147)
                      +++|.+.   |++|++++|+...... .+.+..               ....++.++.+|++++      +++..+++  
T Consensus        90 ~~~Ll~~~~~g~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld~~~~~~~~~--  166 (478)
T 4dqv_A           90 VLELLRRLDVDGRLICLVRAESDEDA-RRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAE--  166 (478)
T ss_dssp             HHHHHHHSCTTCEEEEEECSSSHHHH-HHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCCHHHHHHHHH--
T ss_pred             HHHHHhcCCCCCEEEEEECCCCcHHH-HHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCCHHHHHHHHc--
Confidence            4567777   8999999998654322 122211               1113689999999954      45554443  


Q ss_pred             HhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           58 SSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        58 ~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                           .+|++   ||....         +.++..+++|+.++..+++++..    .+.+++|++||...
T Consensus       167 -----~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa~~----~~~~~~V~iSS~~v  217 (478)
T 4dqv_A          167 -----TVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIALT----TKLKPFTYVSTADV  217 (478)
T ss_dssp             -----HCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHHTS----SSCCCEEEEEEGGG
T ss_pred             -----CCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeehhh
Confidence                 57888   555422         12346789999999999998754    33457999999653

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=98.02  E-value=4.9e-06  Score=58.04  Aligned_cols=91  Identities=12%  Similarity=0.028  Sum_probs=63.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+....+     +.     ++.++.+|++ ++++.++++       .+|++   ||.....    
T Consensus        19 ~~~L~~~g~~V~~~~r~~~~~~-----~~-----~~~~~~~Dl~-~~~~~~~~~-------~~d~Vih~a~~~~~~----   76 (311)
T 3m2p_A           19 VESIKNDGNTPIILTRSIGNKA-----IN-----DYEYRVSDYT-LEDLINQLN-------DVDAVVHLAATRGSQ----   76 (311)
T ss_dssp             HHHHHHTTCEEEEEESCCC---------------CCEEEECCCC-HHHHHHHTT-------TCSEEEECCCCCCSS----
T ss_pred             HHHHHhCCCEEEEEeCCCCccc-----CC-----ceEEEEcccc-HHHHHHhhc-------CCCEEEEccccCCCC----
Confidence            4567888999999999843221     21     4788999999 887766653       68888   5554221    


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                           +....+++|+.++..+++++...    +.+++|++||...
T Consensus        77 -----~~~~~~~~n~~~~~~ll~a~~~~----~~~r~v~~SS~~v  112 (311)
T 3m2p_A           77 -----GKISEFHDNEILTQNLYDACYEN----NISNIVYASTISA  112 (311)
T ss_dssp             -----SCGGGTHHHHHHHHHHHHHHHHT----TCCEEEEEEEGGG
T ss_pred             -----ChHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEccHHH
Confidence                 33457889999999998887643    3467999999554

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=98.02  E-value=1.1e-05  Score=55.40  Aligned_cols=90  Identities=11%  Similarity=0.053  Sum_probs=63.1

Q ss_pred             ccccccC--CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVH--YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~--G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|.++  |++|++++|+.+..+++.    .   .++.++.+|++|++++.++++       .+|++   +|.. .   
T Consensus        17 ~~~L~~~~~g~~V~~~~r~~~~~~~l~----~---~~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~-~---   78 (287)
T 2jl1_A           17 IQHLLKKVPASQIIAIVRNVEKASTLA----D---QGVEVRHGDYNQPESLQKAFA-------GVSKLLFISGPH-Y---   78 (287)
T ss_dssp             HHHHTTTSCGGGEEEEESCTTTTHHHH----H---TTCEEEECCTTCHHHHHHHTT-------TCSEEEECCCCC-S---
T ss_pred             HHHHHHhCCCCeEEEEEcCHHHHhHHh----h---cCCeEEEeccCCHHHHHHHHh-------cCCEEEEcCCCC-c---
Confidence            4567777  999999999876654332    1   147888999999988876653       47888   5532 1   


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                          . +      ++|+.++..+++++..    .+.+++|++||....
T Consensus        79 ----~-~------~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~  111 (287)
T 2jl1_A           79 ----D-N------TLLIVQHANVVKAARD----AGVKHIAYTGYAFAE  111 (287)
T ss_dssp             ----C-H------HHHHHHHHHHHHHHHH----TTCSEEEEEEETTGG
T ss_pred             ----C-c------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCC
Confidence                1 1      5688888888888754    344689999997653

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=98.00  E-value=4.9e-06  Score=57.57  Aligned_cols=70  Identities=14%  Similarity=0.073  Sum_probs=49.6

Q ss_pred             EEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEE
Q 040927           40 HLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIV  116 (147)
Q Consensus        40 ~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv  116 (147)
                      +.+|++|++++.++++..     ++|++   ||.... .    .+.++++..+++|+.++..+++++...    + .++|
T Consensus        36 ~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v  100 (299)
T 1n2s_A           36 FCGDFSNPKGVAETVRKL-----RPDVIVNAAAHTAV-D----KAESEPELAQLLNATSVEAIAKAANET----G-AWVV  100 (299)
T ss_dssp             SCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH-H----HHTTCHHHHHHHHTHHHHHHHHHHTTT----T-CEEE
T ss_pred             ccccCCCHHHHHHHHHhc-----CCCEEEECcccCCH-h----hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CcEE
Confidence            358999999888877653     57888   554421 1    122446778899999999999987542    3 4799


Q ss_pred             EEcCCCCC
Q 040927          117 NASSSMGK  124 (147)
Q Consensus       117 ~isS~~~~  124 (147)
                      ++||....
T Consensus       101 ~~SS~~vy  108 (299)
T 1n2s_A          101 HYSTDYVF  108 (299)
T ss_dssp             EEEEGGGS
T ss_pred             EEecccEE
Confidence            99997543

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=97.98  E-value=7.1e-07  Score=61.62  Aligned_cols=91  Identities=19%  Similarity=0.068  Sum_probs=62.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+.+.+          . .++.++.+|++|++++.++++      +++|++   ||..       
T Consensus        19 ~~~L~~~g~~V~~~~r~~~~~----------~-~~~~~~~~Dl~d~~~~~~~~~------~~~d~vih~a~~~-------   74 (286)
T 3gpi_A           19 ARRLTAQGHEVTGLRRSAQPM----------P-AGVQTLIADVTRPDTLASIVH------LRPEILVYCVAAS-------   74 (286)
T ss_dssp             HHHHHHTTCCEEEEECTTSCC----------C-TTCCEEECCTTCGGGCTTGGG------GCCSEEEECHHHH-------
T ss_pred             HHHHHHCCCEEEEEeCCcccc----------c-cCCceEEccCCChHHHHHhhc------CCCCEEEEeCCCC-------
Confidence            456778899999998876541          1 257889999999988776553      368888   4431       


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                         ..+.+..+++|+.++..+++++.    +.+.+++|++||...
T Consensus        75 ---~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~v  112 (286)
T 3gpi_A           75 ---EYSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGV  112 (286)
T ss_dssp             ---HHC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGG
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEE
Confidence               13346678899999988888865    344578999999654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=97.97  E-value=8.1e-06  Score=62.81  Aligned_cols=99  Identities=12%  Similarity=0.016  Sum_probs=66.9

Q ss_pred             ccccccC-CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHH-HHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVH-YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPAS-VDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~-G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|.+. |++|++++|+....++.    .. . .++.++.+|++|.++ ++.+++       .+|++   ||.... ..
T Consensus       332 ~~~Ll~~~g~~V~~~~r~~~~~~~~----~~-~-~~v~~v~~Dl~d~~~~~~~~~~-------~~D~Vih~Aa~~~~-~~  397 (660)
T 1z7e_A          332 TERLLREDHYEVYGLDIGSDAISRF----LN-H-PHFHFVEGDISIHSEWIEYHVK-------KCDVVLPLVAIATP-IE  397 (660)
T ss_dssp             HHHHHHSSSEEEEEEESCCTTTGGG----TT-C-TTEEEEECCTTTCHHHHHHHHH-------HCSEEEECCCCCCT-HH
T ss_pred             HHHHHhcCCCEEEEEEcCchhhhhh----cc-C-CceEEEECCCCCcHHHHHHhhc-------CCCEEEECceecCc-cc
Confidence            4556666 88999988876543221    11 2 258889999998765 444442       46888   565422 11


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                          ..++++..+++|+.++..+++++...    + +++|++||...
T Consensus       398 ----~~~~~~~~~~~Nv~gt~~ll~aa~~~----~-~r~V~~SS~~v  435 (660)
T 1z7e_A          398 ----YTRNPLRVFELDFEENLRIIRYCVKY----R-KRIIFPSTSEV  435 (660)
T ss_dssp             ----HHHSHHHHHHHHTHHHHHHHHHHHHT----T-CEEEEECCGGG
T ss_pred             ----cccCHHHHHHhhhHHHHHHHHHHHHh----C-CEEEEEecHHH
Confidence                12456788999999999999988653    3 68999999654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.91  E-value=4.5e-07  Score=62.99  Aligned_cols=87  Identities=11%  Similarity=-0.040  Sum_probs=61.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|++.|++|++++|+.++++++.+++...+  ++.++.+|+++++++.++++       .+|++   +|......++.
T Consensus       136 a~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~--~~~~~~~D~~~~~~~~~~~~-------~~DvlVn~ag~g~~~~~~~  206 (287)
T 1lu9_A          136 AALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVNVTAAETADDASRAEAVK-------GAHFVFTAGAIGLELLPQA  206 (287)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--TCCCEEEECCSHHHHHHHTT-------TCSEEEECCCTTCCSBCHH
T ss_pred             HHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEecCCCHHHHHHHHH-------hCCEEEECCCccccCCChh
Confidence            45678899999999999988888888776532  25677899999987766543       36888   54321222333


Q ss_pred             cccH-HHHHHhHHHhhhhHH
Q 040927           79 TQTY-ELAEKCIQTNYYGNK   97 (147)
Q Consensus        79 ~~~~-~~~~~~~~~n~~~~~   97 (147)
                      +.+. +.|+..+++|+.+++
T Consensus       207 ~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          207 AWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             HHTTCTTCCEEEECCCSSSC
T ss_pred             HcCchHHHHHHHHhhhhhhH
Confidence            3333 666778999999877

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=97.83  E-value=0.00028  Score=49.13  Aligned_cols=102  Identities=14%  Similarity=0.053  Sum_probs=70.8

Q ss_pred             CcEEEEeecChhhHHHHHHHHHhcCCCceEEE----EecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhccc
Q 040927            9 YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFH----LLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQT   81 (147)
Q Consensus         9 G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~----~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~   81 (147)
                      +.+|++++.+..-...+.+.|...+. ++..+    .+|++|.+++.++++..     .+|++   ||.... .   ...
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~-~---~~~   72 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRTRDELNLLDSRAVHDFFASE-----RIDQVYLAAAKVGG-I---VAN   72 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTT-EEEECCCTTTCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCC-H---HHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEecCccCCccCHHHHHHHHHhc-----CCCEEEEcCeecCC-c---chh
Confidence            34678888887777788888876653 33332    26999998888877653     67888   554421 1   112


Q ss_pred             HHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           82 YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        82 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      .++.+..+++|+.++..+++++...    +.+++|++||....
T Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~vy  111 (321)
T 1e6u_A           73 NTYPADFIYQNMMIESNIIHAAHQN----DVNKLLFLGSSCIY  111 (321)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEECCGGGS
T ss_pred             hhCHHHHHHHHHHHHHHHHHHHHHh----CCCeEEEEccHHHc
Confidence            3455778999999999999988663    33689999996543

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=97.79  E-value=6.9e-05  Score=51.90  Aligned_cols=103  Identities=14%  Similarity=0.069  Sum_probs=72.8

Q ss_pred             CCcEEEEeecChhhHHHHHHHHHhcCC---Cc---eEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            8 HYSMGEATTKDEKRGLAAVEKLKNSGC---DN---VIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         8 ~G~~v~l~~r~~~~~~~~~~~l~~~~~---~~---~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      .+.+|++++.+..-...+...|.+.|.   ..   +..+.+|++|++++.++++..     ++|++   ||.... ..  
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----~~d~Vih~A~~~~~-~~--   76 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKV-----QPTHVIHLAAMVGG-LF--   76 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEECCTTTCCTTSHHHHHHHHHHS-----CCSEEEECCCCCCC-HH--
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCCcccccccccCceecccCCHHHHHHHHhhc-----CCCEEEECceeccc-cc--
Confidence            467899999998888888888877652   11   223368999999888877652     68888   555421 11  


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                       .+.++....+++|+.++..+++++...    +.+++|++||...
T Consensus        77 -~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~v~~SS~~v  116 (319)
T 4b8w_A           77 -RNIKYNLDFWRKNVHMNDNVLHSAFEV----GARKVVSCLSTCI  116 (319)
T ss_dssp             -HHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGG
T ss_pred             -ccccCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEEcchhh
Confidence             122345678899999999999987653    3458999999754

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=97.77  E-value=6.2e-05  Score=53.42  Aligned_cols=101  Identities=11%  Similarity=0.007  Sum_probs=63.7

Q ss_pred             ccccccCC-cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHY-SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G-~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++| ++|+++.|+.....     +....  .+. +.+|++|.+.++.+++.  ..++.+|++   ||....    
T Consensus        63 ~~~L~~~g~~~V~~~~r~~~~~~-----~~~~~--~~~-~~~d~~~~~~~~~~~~~--~~~~~~d~Vih~A~~~~~----  128 (357)
T 2x6t_A           63 VKALNDKGITDILVVDNLKDGTK-----FVNLV--DLN-IADYMDKEDFLIQIMAG--EEFGDVEAIFHEGACSST----  128 (357)
T ss_dssp             HHHHHHTTCCCEEEEECCSSGGG-----GGGTT--TSC-CSEEEEHHHHHHHHHTT--CCCSSCCEEEECCSCCCT----
T ss_pred             HHHHHHCCCcEEEEEecCCCcch-----hhccc--Cce-EeeecCcHHHHHHHHhh--cccCCCCEEEECCcccCC----
Confidence            34556666 66777666543210     01111  122 56788888777766543  124679998   555422    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                         +.++++..+++|+.++..+++++.+.    +. ++|++||....
T Consensus       129 ---~~~~~~~~~~~n~~~~~~ll~a~~~~----~~-r~V~~SS~~v~  167 (357)
T 2x6t_A          129 ---TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATY  167 (357)
T ss_dssp             ---TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGG
T ss_pred             ---ccCCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEcchHHh
Confidence               12346788999999999999999874    33 79999997643

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=97.75  E-value=7.9e-06  Score=56.72  Aligned_cols=100  Identities=11%  Similarity=0.011  Sum_probs=65.8

Q ss_pred             ccccccCC-cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHY-SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G-~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++| ++|+++.|+.....  ...+.     .+. +.+|++|.+.++.+++...  ++.+|++   ||....    
T Consensus        16 ~~~L~~~g~~~V~~~~r~~~~~~--~~~~~-----~~~-~~~d~~~~~~~~~~~~~~~--~~~~d~vi~~a~~~~~----   81 (310)
T 1eq2_A           16 VKALNDKGITDILVVDNLKDGTK--FVNLV-----DLN-IADYMDKEDFLIQIMAGEE--FGDVEAIFHEGACSST----   81 (310)
T ss_dssp             HHHHHTTTCCCEEEEECCSSGGG--GHHHH-----TSC-CSEEEEHHHHHHHHHTTCC--CSSCCEEEECCSCCCT----
T ss_pred             HHHHHHCCCcEEEEEccCCCCch--hhhcC-----cce-eccccccHHHHHHHHhccc--cCCCcEEEECcccccC----
Confidence            46678889 89999998754321  11121     122 6789988877766553210  2368988   554422    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                         +.++++..+++|+.++..+++++.+.    +. ++|++||...
T Consensus        82 ---~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v  119 (310)
T 1eq2_A           82 ---TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAAT  119 (310)
T ss_dssp             ---TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGG
T ss_pred             ---cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHH
Confidence               12345778999999999999998764    33 7999999754

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=97.72  E-value=1.1e-05  Score=57.04  Aligned_cols=98  Identities=17%  Similarity=0.081  Sum_probs=62.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|+.....+..+.+.  ...++.++.+|+.+..            +..+|++   ||.... ... 
T Consensus        44 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~~d~vih~A~~~~~-~~~-  107 (343)
T 2b69_A           44 TDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPL------------YIEVDQIYHLASPASP-PNY-  107 (343)
T ss_dssp             HHHHHHTTCEEEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCC------------CCCCSEEEECCSCCSH-HHH-
T ss_pred             HHHHHHCCCEEEEEeCCCccchhhhhhhc--cCCceEEEeCccCChh------------hcCCCEEEECccccCc-hhh-
Confidence            45677788998888886432111111111  1125788889998752            3578988   554422 111 


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                         .++++..+++|+.++..+++++...    + .++|++||...
T Consensus       108 ---~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v  144 (343)
T 2b69_A          108 ---MYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEV  144 (343)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGG
T ss_pred             ---hhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHH
Confidence               1234678899999999999998764    2 48999999653

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.66  E-value=3.7e-05  Score=52.97  Aligned_cols=89  Identities=9%  Similarity=-0.006  Sum_probs=57.5

Q ss_pred             cccccC-CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            3 RSNQVH-YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         3 ~~l~~~-G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      +.|.+. |++|+++.|+.+....+    .  . .++.++.+|++|++++.++++       .+|++   +|.... .   
T Consensus        18 ~~L~~~~g~~V~~~~R~~~~~~~~----~--~-~~v~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~~-~---   79 (289)
T 3e48_A           18 NQAIANHIDHFHIGVRNVEKVPDD----W--R-GKVSVRQLDYFNQESMVEAFK-------GMDTVVFIPSIIHP-S---   79 (289)
T ss_dssp             HHHHHTTCTTEEEEESSGGGSCGG----G--B-TTBEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCCS-H---
T ss_pred             HHHhhCCCCcEEEEECCHHHHHHh----h--h-CCCEEEEcCCCCHHHHHHHHh-------CCCEEEEeCCCCcc-c---
Confidence            456666 99999999987654321    1  1 258899999999988876653       57888   554322 1   


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                                 ..|+.+..    .+++.+++.+.++||++||....
T Consensus        80 -----------~~~~~~~~----~l~~aa~~~gv~~iv~~Ss~~~~  110 (289)
T 3e48_A           80 -----------FKRIPEVE----NLVYAAKQSGVAHIIFIGYYADQ  110 (289)
T ss_dssp             -----------HHHHHHHH----HHHHHHHHTTCCEEEEEEESCCS
T ss_pred             -----------hhhHHHHH----HHHHHHHHcCCCEEEEEcccCCC
Confidence                       11444444    44444555555789999996543

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=97.61  E-value=3.3e-05  Score=54.82  Aligned_cols=97  Identities=8%  Similarity=0.046  Sum_probs=66.5

Q ss_pred             ccccccCC-----cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            2 KRSNQVHY-----SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         2 ~~~l~~~G-----~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      ++.|.++|     ++|++++|+.....       ... .++.++.+|++|++++.++++.    .+.+|++   ||... 
T Consensus        18 ~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~-~~~~~~~~Dl~d~~~~~~~~~~----~~~~d~vih~a~~~~-   84 (364)
T 2v6g_A           18 AEILPLADTPGGPWKVYGVARRTRPAW-------HED-NPINYVQCDISDPDDSQAKLSP----LTDVTHVFYVTWANR-   84 (364)
T ss_dssp             HHHTTSTTCTTCSEEEEEEESSCCCSC-------CCS-SCCEEEECCTTSHHHHHHHHTT----CTTCCEEEECCCCCC-
T ss_pred             HHHHHhCCCCCCceEEEEEeCCCCccc-------ccc-CceEEEEeecCCHHHHHHHHhc----CCCCCEEEECCCCCc-
Confidence            45678889     99999999865422       112 2588899999999887766543    2348888   55441 


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEE-------EEcCCC
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIV-------NASSSM  122 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv-------~isS~~  122 (147)
                               ++.+..+++|+.++..+++++.+...  +-.++|       ++||..
T Consensus        85 ---------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~v~~~g~~i~~Ss~~  129 (364)
T 2v6g_A           85 ---------STEQENCEANSKMFRNVLDAVIPNCP--NLKHISLQTGRKHYMGPFE  129 (364)
T ss_dssp             ---------SSHHHHHHHHHHHHHHHHHHHTTTCT--TCCEEEEECCTHHHHCCGG
T ss_pred             ---------chHHHHHHHhHHHHHHHHHHHHHhcc--ccceEEeccCceEEEechh
Confidence                     13467889999999999999876521  224565       677754

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.60  E-value=0.00012  Score=50.17  Aligned_cols=88  Identities=14%  Similarity=0.037  Sum_probs=56.6

Q ss_pred             ccccccC--CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVH--YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~--G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      ++.|.++  |++|++++|+.+..+.+.    ..   ++.++.+|++|++++.++++       .+|++   +|.. .   
T Consensus        16 ~~~L~~~~~g~~V~~~~r~~~~~~~~~----~~---~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~a~~~-~---   77 (286)
T 2zcu_A           16 IESLMKTVPASQIVAIVRNPAKAQALA----AQ---GITVRQADYGDEAALTSALQ-------GVEKLLLISSSE-V---   77 (286)
T ss_dssp             HHHHTTTSCGGGEEEEESCTTTCHHHH----HT---TCEEEECCTTCHHHHHHHTT-------TCSEEEECC--------
T ss_pred             HHHHHhhCCCceEEEEEcChHhhhhhh----cC---CCeEEEcCCCCHHHHHHHHh-------CCCEEEEeCCCC-c---
Confidence            4567777  999999999876554322    11   47888999999988776653       46888   4432 1   


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                                   ..|+.++..+++++..    .+.+++|++||..+.
T Consensus        78 -------------~~~~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~  108 (286)
T 2zcu_A           78 -------------GQRAPQHRNVINAAKA----AGVKFIAYTSLLHAD  108 (286)
T ss_dssp             -----------------CHHHHHHHHHHH----HTCCEEEEEEETTTT
T ss_pred             -------------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCC
Confidence                         0256666666666543    344789999997764

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=97.40  E-value=0.00061  Score=48.48  Aligned_cols=89  Identities=15%  Similarity=0.062  Sum_probs=55.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEec-CCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLD-VTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++|++|+++.|+.+...  .+.+....  ++.++.+| ++|++++.++++       .+|.+   ++.. . .  
T Consensus        22 ~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~~--~v~~v~~D~l~d~~~l~~~~~-------~~d~Vi~~a~~~-~-~--   86 (352)
T 1xgk_A           22 IRVAAAVGHHVRAQVHSLKGLI--AEELQAIP--NVTLFQGPLLNNVPLMDTLFE-------GAHLAFINTTSQ-A-G--   86 (352)
T ss_dssp             HHHHHHTTCCEEEEESCSCSHH--HHHHHTST--TEEEEESCCTTCHHHHHHHHT-------TCSEEEECCCST-T-S--
T ss_pred             HHHHHhCCCEEEEEECCCChhh--HHHHhhcC--CcEEEECCccCCHHHHHHHHh-------cCCEEEEcCCCC-C-c--
Confidence            4567788999999999876542  12333222  47888999 999988877653       46776   3322 1 0  


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSM  122 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~  122 (147)
                                  +.|..+ ..++++    +.+.+ .+++|++||..
T Consensus        87 ------------~~~~~~-~~l~~a----a~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           87 ------------DEIAIG-KDLADA----AKRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             ------------CHHHHH-HHHHHH----HHHHSCCSEEEEEECCC
T ss_pred             ------------HHHHHH-HHHHHH----HHHcCCccEEEEeCCcc
Confidence                        123333 344444    44444 46899999976

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.26  E-value=0.00031  Score=48.57  Aligned_cols=91  Identities=11%  Similarity=-0.035  Sum_probs=54.7

Q ss_pred             ccccccCC-cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHY-SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G-~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++| ++|++++|+.+....  ..+...   .+.++.+|++|++++.++++       .+|++   +|..   .. 
T Consensus        22 ~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~~---~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~---~~-   85 (299)
T 2wm3_A           22 ARTLLEDGTFKVRVVTRNPRKKAA--KELRLQ---GAEVVQGDQDDQVIMELALN-------GAYATFIVTNYW---ES-   85 (299)
T ss_dssp             HHHHHHHCSSEEEEEESCTTSHHH--HHHHHT---TCEEEECCTTCHHHHHHHHT-------TCSEEEECCCHH---HH-
T ss_pred             HHHHHhcCCceEEEEEcCCCCHHH--HHHHHC---CCEEEEecCCCHHHHHHHHh-------cCCEEEEeCCCC---cc-
Confidence            45677778 999999998765321  223222   37888999999988877653       47887   4321   10 


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS  121 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  121 (147)
                        .       ..+.|+.+...    +++.+.+.+.++||++|+.
T Consensus        86 --~-------~~~~~~~~~~~----~~~aa~~~gv~~iv~~S~~  116 (299)
T 2wm3_A           86 --C-------SQEQEVKQGKL----LADLARRLGLHYVVYSGLE  116 (299)
T ss_dssp             --T-------CHHHHHHHHHH----HHHHHHHHTCSEEEECCCC
T ss_pred             --c-------cchHHHHHHHH----HHHHHHHcCCCEEEEEcCc
Confidence              0       12234444444    4444444455789985553

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.98  E-value=0.001  Score=45.51  Aligned_cols=47  Identities=13%  Similarity=-0.012  Sum_probs=35.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      ++.|.++|++|++++|+......+..       .++.++.+|++|.+            +..+|++
T Consensus        21 ~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~------------~~~~d~v   67 (286)
T 3ius_A           21 SRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS------------LDGVTHL   67 (286)
T ss_dssp             HHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC------------CTTCCEE
T ss_pred             HHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc------------cCCCCEE
Confidence            56788899999999999876544322       14889999999833            4578988

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=96.96  E-value=0.0005  Score=51.43  Aligned_cols=98  Identities=19%  Similarity=0.141  Sum_probs=60.4

Q ss_pred             CcEEEEeecChhhHHHHHHHHHhcCCCceEE----------EEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927            9 YSMGEATTKDEKRGLAAVEKLKNSGCDNVIF----------HLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         9 G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~----------~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~   75 (147)
                      +.+|++++.+..-...+.+.|...|. ++..          +.+|+.+.         ..+.+..+|++   ||.... .
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~-~V~~l~R~~~~~~~v~~d~~~~---------~~~~l~~~D~Vih~A~~~~~-~  215 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGH-EVIQLVRKEPKPGKRFWDPLNP---------ASDLLDGADVLVHLAGEPIF-G  215 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSSCCTTCEECCTTSC---------CTTTTTTCSEEEECCCC-----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCCccceeecccch---------hHHhcCCCCEEEECCCCccc-c
Confidence            56777777777667777777766553 3333          34455432         12334578988   554311 1


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                         ..+.+..+..+++|+.++..+++++..   ..+.+++|++||...
T Consensus       216 ---~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~~~r~V~~SS~~v  257 (516)
T 3oh8_A          216 ---RFNDSHKEAIRESRVLPTKFLAELVAE---STQCTTMISASAVGF  257 (516)
T ss_dssp             ----CCGGGHHHHHHHTHHHHHHHHHHHHH---CSSCCEEEEEEEGGG
T ss_pred             ---ccchhHHHHHHHHHHHHHHHHHHHHHh---cCCCCEEEEeCcceE
Confidence               223345678899999999999997442   234468999999654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=96.93  E-value=0.0014  Score=46.64  Aligned_cols=92  Identities=16%  Similarity=0.080  Sum_probs=68.0

Q ss_pred             EEEEeecChhhHHHHHHHHHhcCCCceEEEEecC-CCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHH
Q 040927           11 MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDV-TDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAE   86 (147)
Q Consensus        11 ~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~   86 (147)
                      +|++++.+..-...+.+.|.+.|.  +.++.+|. .|++++.++++       .+|++   ||....         +++.
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~--~~v~~~d~~~d~~~l~~~~~-------~~d~Vih~a~~~~~---------~~~~   63 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTD--HHIFEVHRQTKEEELESALL-------KADFIVHLAGVNRP---------EHDK   63 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCC--CEEEECCTTCCHHHHHHHHH-------HCSEEEECCCSBCT---------TCST
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC--CEEEEECCCCCHHHHHHHhc-------cCCEEEECCcCCCC---------CCHH
Confidence            688889888888888888887763  47888999 89999888775       37887   554422         1234


Q ss_pred             HhHHHhhhhHHHHHHHHHHhhccCCC-CeEEEEcCCCCC
Q 040927           87 KCIQTNYYGNKRMCEALIPLLQLSDS-PRIVNASSSMGK  124 (147)
Q Consensus        87 ~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~  124 (147)
                      ..+++|+.++..+++++..    .+. .++|++||....
T Consensus        64 ~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~Ss~~~~   98 (369)
T 3st7_A           64 EFSLGNVSYLDHVLDILTR----NTKKPAILLSSSIQAT   98 (369)
T ss_dssp             TCSSSCCBHHHHHHHHHTT----CSSCCEEEEEEEGGGG
T ss_pred             HHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCchhhc
Confidence            5678899999998888643    333 389999997654

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.78  E-value=0.0035  Score=45.53  Aligned_cols=61  Identities=13%  Similarity=0.155  Sum_probs=49.4

Q ss_pred             ccccccCC---cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHY---SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G---~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      ++.|++.|   ..|++.+|+.++++++.+++...++.++..+.+|++|.++++++++..     ++|++
T Consensus        17 a~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----~~DvV   80 (405)
T 4ina_A           17 AHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----KPQIV   80 (405)
T ss_dssp             HHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             HHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----CCCEE
Confidence            45677777   489999999999999988887654335888999999999999888775     57877

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.68  E-value=0.0028  Score=43.73  Aligned_cols=55  Identities=13%  Similarity=0.121  Sum_probs=39.1

Q ss_pred             ccccccCCcEEEEeecCh-------hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHYSMGEATTKDE-------KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      ++.|.+.|++|+++.|+.       ++.+.+ +++...   .+.++.+|++|++++.++++       .+|++
T Consensus        19 ~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~~---~v~~v~~D~~d~~~l~~~~~-------~~d~v   80 (307)
T 2gas_A           19 VWASIKAGNPTYALVRKTITAANPETKEELI-DNYQSL---GVILLEGDINDHETLVKAIK-------QVDIV   80 (307)
T ss_dssp             HHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHHT---TCEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             HHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHhC---CCEEEEeCCCCHHHHHHHHh-------CCCEE
Confidence            456778899999999986       444332 334322   37889999999988876653       47888

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.67  E-value=0.0014  Score=45.71  Aligned_cols=56  Identities=9%  Similarity=0.109  Sum_probs=39.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      ++.|.+.|++|+++.|+.....+..+++...   .+.++.+|++|++++.++++       .+|++
T Consensus        28 ~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~---~v~~v~~Dl~d~~~l~~a~~-------~~d~v   83 (318)
T 2r6j_A           28 VKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL---GAIIVKGELDEHEKLVELMK-------KVDVV   83 (318)
T ss_dssp             HHHHHHTTCCEEEEECTTCSCHHHHHHHHHT---TCEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             HHHHHHCCCcEEEEECCCCchhhHHHHhhcC---CCEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            4567888999999999874222223334332   37889999999988877663       47887

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.66  E-value=0.0018  Score=45.06  Aligned_cols=56  Identities=11%  Similarity=0.100  Sum_probs=38.5

Q ss_pred             ccccccCCcEEEEeecCh-h----hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHYSMGEATTKDE-K----RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~-~----~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      ++.|.+.|++|+++.|+. .    ...+...++...   .+.++.+|++|++++.++++       .+|++
T Consensus        21 ~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~---~v~~v~~D~~d~~~l~~a~~-------~~d~v   81 (321)
T 3c1o_A           21 VRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSM---GVTIIEGEMEEHEKMVSVLK-------QVDIV   81 (321)
T ss_dssp             HHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHT---TCEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             HHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcC---CcEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            466788899999999985 1    222222333322   47889999999988877653       47887

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.61  E-value=0.003  Score=44.55  Aligned_cols=76  Identities=8%  Similarity=0.105  Sum_probs=52.1

Q ss_pred             ccccccCCcEEEEeecCh----hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYSMGEATTKDE----KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~----~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|.+.|++|+++.|+.    ++.+ ..+.+...   ++.++.+|++|.+++.+++++     ..+|++   +|.    
T Consensus        27 ~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~~---~v~~~~~Dl~d~~~l~~~~~~-----~~~d~Vi~~a~~----   93 (346)
T 3i6i_A           27 ATASLDAHRPTYILARPGPRSPSKAK-IFKALEDK---GAIIVYGLINEQEAMEKILKE-----HEIDIVVSTVGG----   93 (346)
T ss_dssp             HHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHHT---TCEEEECCTTCHHHHHHHHHH-----TTCCEEEECCCG----
T ss_pred             HHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHhC---CcEEEEeecCCHHHHHHHHhh-----CCCCEEEECCch----
Confidence            456778899999999976    2222 22333322   488999999999998888765     267888   333    


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHh
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPL  106 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  106 (147)
                                      .|+.+...+++++...
T Consensus        94 ----------------~n~~~~~~l~~aa~~~  109 (346)
T 3i6i_A           94 ----------------ESILDQIALVKAMKAV  109 (346)
T ss_dssp             ----------------GGGGGHHHHHHHHHHH
T ss_pred             ----------------hhHHHHHHHHHHHHHc
Confidence                            1677777777776543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.46  E-value=0.012  Score=40.58  Aligned_cols=85  Identities=8%  Similarity=-0.018  Sum_probs=53.1

Q ss_pred             ccccccCCcEEEEeecCh-----hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            2 KRSNQVHYSMGEATTKDE-----KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      ++.|.+.|++|+++.|+.     ++.+. .+.+..  . .+.++.+|++|++++.++++       .+|++   +|....
T Consensus        21 ~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~--~-~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~~   89 (313)
T 1qyd_A           21 VNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFKQ--L-GAKLIEASLDDHQRLVDALK-------QVDVVISALAGGVL   89 (313)
T ss_dssp             HHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHHT--T-TCEEECCCSSCHHHHHHHHT-------TCSEEEECCCCSSS
T ss_pred             HHHHHhCCCcEEEEECCCcccchhHHHH-HHHHHh--C-CeEEEeCCCCCHHHHHHHHh-------CCCEEEECCccccc
Confidence            456788899999999984     22222 223322  2 47889999999988877653       47888   554321


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEE
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVN  117 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~  117 (147)
                       .               .|+.+...+++++.    +.+ -+++|+
T Consensus        90 -~---------------~~~~~~~~l~~aa~----~~g~v~~~v~  114 (313)
T 1qyd_A           90 -S---------------HHILEQLKLVEAIK----EAGNIKRFLP  114 (313)
T ss_dssp             -S---------------TTTTTHHHHHHHHH----HSCCCSEEEC
T ss_pred             -h---------------hhHHHHHHHHHHHH----hcCCCceEEe
Confidence             1               25666666666654    333 456774

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.17  E-value=0.0034  Score=43.36  Aligned_cols=56  Identities=14%  Similarity=0.086  Sum_probs=38.0

Q ss_pred             ccccccCCcEEEEeecChhh-----HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHYSMGEATTKDEKR-----GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      ++.|.+.|++|+++.|+...     ..+..+.+...   .+.++.+|++|++++.++++       .+|++
T Consensus        21 ~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~---~v~~v~~D~~d~~~l~~~~~-------~~d~v   81 (308)
T 1qyc_A           21 AKASLDLGHPTFLLVRESTASSNSEKAQLLESFKAS---GANIVHGSIDDHASLVEAVK-------NVDVV   81 (308)
T ss_dssp             HHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTT---TCEEECCCTTCHHHHHHHHH-------TCSEE
T ss_pred             HHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhC---CCEEEEeccCCHHHHHHHHc-------CCCEE
Confidence            45678889999999997421     11122333222   47889999999988877664       37877

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=95.92  E-value=6.9e-05  Score=52.14  Aligned_cols=104  Identities=11%  Similarity=0.032  Sum_probs=53.9

Q ss_pred             CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC----CHHHHHH-----HHHHHHhhcCCccEE---ecCCCcchh
Q 040927            9 YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT----DPASVDS-----LVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         9 G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~----~~~~~~~-----~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +.+|++++.+..-...+.+.|.+.|. ++..+.-+-.    ..+.+..     -+..+......+|++   ||.... ..
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~d~vi~~a~~~~~-~~   84 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGE-EVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLSDVRLVYHLASHKSV-PR   84 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHTTEEEEEECCCCCCH-HH
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcccccchhhhhhhccCCCeeEEeCccccCCEEEECCccCCh-HH
Confidence            45677777776666677777766553 3333211111    0000000     000011111267888   554422 11


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                      . .   ++....++ |+.++..+++++...    +.+++|++||...
T Consensus        85 ~-~---~~~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v  122 (321)
T 3vps_A           85 S-F---KQPLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEV  122 (321)
T ss_dssp             H-T---TSTTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGG
T ss_pred             H-H---hCHHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHH
Confidence            1 1   11233556 999999999988664    2368999999654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=94.81  E-value=0.033  Score=32.46  Aligned_cols=52  Identities=13%  Similarity=0.052  Sum_probs=37.5

Q ss_pred             ccccccCC-cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHY-SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G-~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      ++.|.+.| ++|++++|+.+..+.+.    ..   .+..+.+|+++.+++.+.+       ..+|++
T Consensus        21 ~~~l~~~g~~~v~~~~r~~~~~~~~~----~~---~~~~~~~d~~~~~~~~~~~-------~~~d~v   73 (118)
T 3ic5_A           21 AALLKTSSNYSVTVADHDLAALAVLN----RM---GVATKQVDAKDEAGLAKAL-------GGFDAV   73 (118)
T ss_dssp             HHHHHHCSSEEEEEEESCHHHHHHHH----TT---TCEEEECCTTCHHHHHHHT-------TTCSEE
T ss_pred             HHHHHhCCCceEEEEeCCHHHHHHHH----hC---CCcEEEecCCCHHHHHHHH-------cCCCEE
Confidence            34567788 89999999987766543    11   3677889999987776554       367887

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=94.14  E-value=0.03  Score=40.14  Aligned_cols=85  Identities=15%  Similarity=0.114  Sum_probs=47.1

Q ss_pred             cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhc
Q 040927            3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLT   79 (147)
Q Consensus         3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~   79 (147)
                      +.+...|++|++++|+.+.++.+.+.+   +. .   +.+|.++.+++.+.+.       ..|++   +|......    
T Consensus       183 ~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~-~---~~~~~~~~~~l~~~~~-------~~DvVi~~~g~~~~~~----  244 (369)
T 2eez_A          183 KIALGMGAQVTILDVNHKRLQYLDDVF---GG-R---VITLTATEANIKKSVQ-------HADLLIGAVLVPGAKA----  244 (369)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHT---TT-S---EEEEECCHHHHHHHHH-------HCSEEEECCC----------
T ss_pred             HHHHhCCCEEEEEECCHHHHHHHHHhc---Cc-e---EEEecCCHHHHHHHHh-------CCCEEEECCCCCcccc----
Confidence            445677999999999887665543322   22 2   4467777776655542       46887   33321001    


Q ss_pred             ccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           80 QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        80 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                                      +..+.+..++.|+.  ++.||++++..+
T Consensus       245 ----------------~~li~~~~l~~mk~--gg~iV~v~~~~g  270 (369)
T 2eez_A          245 ----------------PKLVTRDMLSLMKE--GAVIVDVAVDQG  270 (369)
T ss_dssp             -----------------CCSCHHHHTTSCT--TCEEEECC----
T ss_pred             ----------------chhHHHHHHHhhcC--CCEEEEEecCCC
Confidence                            12234566777753  488999998654

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=94.06  E-value=0.037  Score=33.65  Aligned_cols=53  Identities=15%  Similarity=0.013  Sum_probs=37.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      ++.|.+.|++|++++++.+..+.+.+    .   ...++.+|.++++.+.++      .....|.+
T Consensus        22 a~~L~~~g~~V~~id~~~~~~~~~~~----~---~~~~~~gd~~~~~~l~~~------~~~~~d~v   74 (141)
T 3llv_A           22 VRELTAAGKKVLAVDKSKEKIELLED----E---GFDAVIADPTDESFYRSL------DLEGVSAV   74 (141)
T ss_dssp             HHHHHHTTCCEEEEESCHHHHHHHHH----T---TCEEEECCTTCHHHHHHS------CCTTCSEE
T ss_pred             HHHHHHCCCeEEEEECCHHHHHHHHH----C---CCcEEECCCCCHHHHHhC------CcccCCEE
Confidence            45678889999999999876555432    2   256788999998766543      12356776

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=93.43  E-value=2.9e-05  Score=57.50  Aligned_cols=14  Identities=21%  Similarity=0.385  Sum_probs=11.9

Q ss_pred             CeEEEEcCCCCCCc
Q 040927          113 PRIVNASSSMGKLK  126 (147)
Q Consensus       113 ~~iv~isS~~~~~~  126 (147)
                      |+|||+||..|..+
T Consensus       396 GRIVNlsS~~G~p~  409 (488)
T 3ond_A          396 GRLMNLGCATGHPS  409 (488)
T ss_dssp             GSCHHHHHSCCSCH
T ss_pred             CcEEEEecCcccCc
Confidence            89999999888744

>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}

Probab=92.73  E-value=0.49  Score=27.69  Aligned_cols=60  Identities=15%  Similarity=0.187  Sum_probs=42.8

Q ss_pred             cccccCCcEEEEeecChhh--HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            3 RSNQVHYSMGEATTKDEKR--GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         3 ~~l~~~G~~v~l~~r~~~~--~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      +.+.++|.+|++++.+.+.  -.+-.+++...|. .+..    +.|.++...-+.++.++|+.+|++
T Consensus        20 reikrqgvrvvllysdqdekrrrerleefekqgv-dvrt----vedkedfrenireiwerypqldvv   81 (162)
T 2l82_A           20 REIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGV-DVRT----VEDKEDFRENIREIWERYPQLDVV   81 (162)
T ss_dssp             HHHHHTTCEEEEEECCSCHHHHHHHHHHHHTTTC-EEEE----CCSHHHHHHHHHHHHHHCTTCCEE
T ss_pred             HHHHhCCeEEEEEecCchHHHHHHHHHHHHHcCC-ceee----eccHHHHHHHHHHHHHhCCCCcEE
Confidence            4566789999888876433  3334556665554 3444    567888888899999999999987

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=92.18  E-value=0.077  Score=39.12  Aligned_cols=54  Identities=17%  Similarity=0.040  Sum_probs=38.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      ++.|++.|++|++++|+.++++++.+.+    . .+..+.+|++|.+++.+++       ..+|++
T Consensus        19 a~~L~~~G~~V~v~~R~~~~a~~la~~~----~-~~~~~~~Dv~d~~~l~~~l-------~~~DvV   72 (450)
T 1ff9_A           19 LDVLTDSGIKVTVACRTLESAKKLSAGV----Q-HSTPISLDVNDDAALDAEV-------AKHDLV   72 (450)
T ss_dssp             HHHHHTTTCEEEEEESSHHHHHHTTTTC----T-TEEEEECCTTCHHHHHHHH-------TTSSEE
T ss_pred             HHHHHhCcCEEEEEECCHHHHHHHHHhc----C-CceEEEeecCCHHHHHHHH-------cCCcEE
Confidence            4567788999999999987655443222    1 3677889999988776655       268888

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=92.04  E-value=0.55  Score=31.48  Aligned_cols=71  Identities=7%  Similarity=0.009  Sum_probs=41.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.++++|++|++++|+... .       ......+..  .|+   ++..++++.+.+.++.+|++   ||.. .+.+..
T Consensus        36 A~~~~~~Ga~V~lv~~~~~~-~-------~~~~~~~~~--~~v---~s~~em~~~v~~~~~~~Dili~aAAvs-D~~p~~  101 (232)
T 2gk4_A           36 TETLLSAGYEVCLITTKRAL-K-------PEPHPNLSI--REI---TNTKDLLIEMQERVQDYQVLIHSMAVS-DYTPVY  101 (232)
T ss_dssp             HHHHHHTTCEEEEEECTTSC-C-------CCCCTTEEE--EEC---CSHHHHHHHHHHHGGGCSEEEECSBCC-SEEEEE
T ss_pred             HHHHHHCCCEEEEEeCCccc-c-------ccCCCCeEE--EEH---hHHHHHHHHHHHhcCCCCEEEEcCccc-cccchh
Confidence            56677888888888876431 0       000112222  344   45666778888888899999   6665 334444


Q ss_pred             cccHHHHH
Q 040927           79 TQTYELAE   86 (147)
Q Consensus        79 ~~~~~~~~   86 (147)
                      ..+.+++.
T Consensus       102 ~~~~e~~~  109 (232)
T 2gk4_A          102 MTGLEEVQ  109 (232)
T ss_dssp             EEEHHHHH
T ss_pred             hcchhhhh
Confidence            44444443

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=91.96  E-value=0.094  Score=31.93  Aligned_cols=44  Identities=7%  Similarity=-0.173  Sum_probs=32.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHH
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDS   52 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   52 (147)
                      ++.|.+.|++|++++++.+..+++.    ..   .+.++..|.++++.+.+
T Consensus        23 a~~L~~~g~~v~vid~~~~~~~~~~----~~---g~~~i~gd~~~~~~l~~   66 (140)
T 3fwz_A           23 GEKLLASDIPLVVIETSRTRVDELR----ER---GVRAVLGNAANEEIMQL   66 (140)
T ss_dssp             HHHHHHTTCCEEEEESCHHHHHHHH----HT---TCEEEESCTTSHHHHHH
T ss_pred             HHHHHHCCCCEEEEECCHHHHHHHH----Hc---CCCEEECCCCCHHHHHh
Confidence            4567788999999999987765543    22   25678889998875544

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=91.55  E-value=0.62  Score=31.07  Aligned_cols=55  Identities=9%  Similarity=-0.036  Sum_probs=31.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP   71 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~   71 (147)
                      ++.++++|++|++++++.. ++       . +. .+  -.+|+++.   ..+++.+.+.++++|++   ||+.
T Consensus        41 A~~~~~~Ga~V~l~~~~~~-l~-------~-~~-g~--~~~dv~~~---~~~~~~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           41 AAAAARRGANVTLVSGPVS-LP-------T-PP-FV--KRVDVMTA---LEMEAAVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             HHHHHHTTCEEEEEECSCC-CC-------C-CT-TE--EEEECCSH---HHHHHHHHHHGGGCSEEEECCBCC
T ss_pred             HHHHHHCCCEEEEEECCcc-cc-------c-CC-CC--eEEccCcH---HHHHHHHHHhcCCCCEEEECCccc
Confidence            3455666666666655431 10       0 10 12  23566654   45677778888999999   7765

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=91.27  E-value=0.14  Score=33.54  Aligned_cols=44  Identities=16%  Similarity=-0.053  Sum_probs=29.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHH
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVD   51 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~   51 (147)
                      ++.|.+.|++|++++++.+..+++.+..      ...++..|.++++.++
T Consensus        16 a~~L~~~g~~v~vid~~~~~~~~l~~~~------~~~~i~gd~~~~~~l~   59 (218)
T 3l4b_C           16 ARSMLSRKYGVVIINKDRELCEEFAKKL------KATIIHGDGSHKEILR   59 (218)
T ss_dssp             HHHHHHTTCCEEEEESCHHHHHHHHHHS------SSEEEESCTTSHHHHH
T ss_pred             HHHHHhCCCeEEEEECCHHHHHHHHHHc------CCeEEEcCCCCHHHHH
Confidence            4567788999999999988766554332      1445556666554443

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=91.26  E-value=0.21  Score=36.89  Aligned_cols=47  Identities=11%  Similarity=-0.008  Sum_probs=33.9

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHH
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSL   53 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   53 (147)
                      +++.|..+|++|++++++++.++++.+.+      .+..+..|.++++-++++
T Consensus        18 la~~L~~~~~~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~~~L~~A   64 (461)
T 4g65_A           18 LAENLVGENNDITIVDKDGDRLRELQDKY------DLRVVNGHASHPDVLHEA   64 (461)
T ss_dssp             HHHHTCSTTEEEEEEESCHHHHHHHHHHS------SCEEEESCTTCHHHHHHH
T ss_pred             HHHHHHHCCCCEEEEECCHHHHHHHHHhc------CcEEEEEcCCCHHHHHhc
Confidence            36788899999999999998887766554      255566666666555443

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=89.88  E-value=3.1  Score=28.28  Aligned_cols=60  Identities=7%  Similarity=-0.017  Sum_probs=35.1

Q ss_pred             cCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           61 FGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        61 ~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                      +..+|.+   +|... ..+....+....+..++.|+.++..+.+.+...  ..+...+|+.||...
T Consensus        49 l~~~d~vihla~~~i-~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~v  111 (298)
T 4b4o_A           49 LPSCDAAVNLAGENI-LNPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAY  111 (298)
T ss_dssp             CCSCSEEEECCCCCS-SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGG
T ss_pred             ccCCCEEEEeccCcc-cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeee
Confidence            4577877   55321 122223355666778889999988877765432  222345677776543

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=89.07  E-value=0.41  Score=29.42  Aligned_cols=47  Identities=13%  Similarity=-0.069  Sum_probs=31.3

Q ss_pred             ccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHH
Q 040927            2 KRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDS   52 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   52 (147)
                      ++.|.+.|++|++++++ .+..+.+.+..   .. .+.++..|.++++.+.+
T Consensus        19 a~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~-~~~~i~gd~~~~~~l~~   66 (153)
T 1id1_A           19 ILQLNQRGQNVTVISNLPEDDIKQLEQRL---GD-NADVIPGDSNDSSVLKK   66 (153)
T ss_dssp             HHHHHHTTCCEEEEECCCHHHHHHHHHHH---CT-TCEEEESCTTSHHHHHH
T ss_pred             HHHHHHCCCCEEEEECCChHHHHHHHHhh---cC-CCeEEEcCCCCHHHHHH
Confidence            45677889999999997 44444443332   11 36788899998876543

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=89.00  E-value=0.56  Score=32.89  Aligned_cols=57  Identities=12%  Similarity=0.064  Sum_probs=37.7

Q ss_pred             ccccccCCc-EEEEeecC---hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHYS-MGEATTKD---EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G~-~v~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      +..|++.|+ +|++++|+   .++++++.+++....+  ..+...++.+.+++.+.+       ...|++
T Consensus       170 a~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~--~~~~~~~~~~~~~l~~~l-------~~aDiI  230 (315)
T 3tnl_A          170 CIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD--CKAQLFDIEDHEQLRKEI-------AESVIF  230 (315)
T ss_dssp             HHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS--CEEEEEETTCHHHHHHHH-------HTCSEE
T ss_pred             HHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC--CceEEeccchHHHHHhhh-------cCCCEE
Confidence            356778898 79999999   8888888888876543  333445666654443322       246777

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=88.39  E-value=0.44  Score=33.53  Aligned_cols=53  Identities=9%  Similarity=-0.038  Sum_probs=32.1

Q ss_pred             cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      +...|++|++++++.++.+.+ .+   .+..    ..+|.++.+++.+.+.++...  .+|++
T Consensus       190 a~~~Ga~V~~~~~~~~~~~~~-~~---~g~~----~~~d~~~~~~~~~~~~~~~~~--~~D~v  242 (347)
T 2hcy_A          190 AKAMGYRVLGIDGGEGKEELF-RS---IGGE----VFIDFTKEKDIVGAVLKATDG--GAHGV  242 (347)
T ss_dssp             HHHTTCEEEEEECSTTHHHHH-HH---TTCC----EEEETTTCSCHHHHHHHHHTS--CEEEE
T ss_pred             HHHCCCcEEEEcCCHHHHHHH-HH---cCCc----eEEecCccHhHHHHHHHHhCC--CCCEE
Confidence            345788999999887665432 22   3331    224777656666666655433  67887

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=87.74  E-value=0.46  Score=28.28  Aligned_cols=54  Identities=11%  Similarity=-0.034  Sum_probs=33.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      ++.|.+.|++|++++++.+..+.+.+.    .  ....+..|.++++.+.+      ......|++
T Consensus        20 a~~L~~~g~~v~~~d~~~~~~~~~~~~----~--~~~~~~~d~~~~~~l~~------~~~~~~d~v   73 (140)
T 1lss_A           20 AKSLSEKGHDIVLIDIDKDICKKASAE----I--DALVINGDCTKIKTLED------AGIEDADMY   73 (140)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHH----C--SSEEEESCTTSHHHHHH------TTTTTCSEE
T ss_pred             HHHHHhCCCeEEEEECCHHHHHHHHHh----c--CcEEEEcCCCCHHHHHH------cCcccCCEE
Confidence            456777899999999987765543322    1  24566788887655422      112457877

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=87.06  E-value=0.88  Score=31.81  Aligned_cols=51  Identities=14%  Similarity=0.094  Sum_probs=33.0

Q ss_pred             CccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           63 KLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        63 ~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      ..|++   ||.....    ..+   ....+++|+.++..+++++..+-  ..+++++++|+..
T Consensus        80 ~~D~Vih~Ag~~~~~----~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~  133 (327)
T 1y7t_A           80 DADYALLVGAAPRKA----GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPA  133 (327)
T ss_dssp             TCSEEEECCCCCCCT----TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSH
T ss_pred             CCCEEEECCCcCCCC----CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCch
Confidence            57888   6655321    122   24578999999999988876641  1235788877644

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=84.81  E-value=0.03  Score=42.03  Aligned_cols=75  Identities=11%  Similarity=0.105  Sum_probs=41.8

Q ss_pred             cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc--CCccEE---ecCCCc----
Q 040927            3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF--GKLDIL---GGLPDN----   73 (147)
Q Consensus         3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id~l---ag~~~~----   73 (147)
                      +.|++.|++|++++|+.++++++.+++   +. ++.    ++.|   +        +.+  +.+|++   +|....    
T Consensus       381 ~~L~~~G~~V~i~~R~~~~a~~la~~~---~~-~~~----~~~d---l--------~~~~~~~~DilVN~agvg~~~~~~  441 (523)
T 2o7s_A          381 YGAKEKGAKVVIANRTYERALELAEAI---GG-KAL----SLTD---L--------DNYHPEDGMVLANTTSMGMQPNVE  441 (523)
T ss_dssp             HHHHHHCC-CEEEESSHHHHHHHHHHT---TC--CE----ETTT---T--------TTC--CCSEEEEECSSTTCTTCTT
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHc---CC-cee----eHHH---h--------hhccccCceEEEECCCCCCCCCCC
Confidence            456667777777777776666655554   11 121    1111   1        111  358998   454211    


Q ss_pred             chhhhcccHHHHHHhHHHhhhhH
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGN   96 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~   96 (147)
                      ..++.+.+.+.|...+++|+.+.
T Consensus       442 ~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          442 ETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             CCSSCTTTGGGEEEEEECCCSSS
T ss_pred             CCCCChHHcCcCcEEEEEeeCCc
Confidence            13444556677888999999875

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=84.60  E-value=1.1  Score=33.20  Aligned_cols=52  Identities=15%  Similarity=0.120  Sum_probs=36.8

Q ss_pred             cccccC-CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            3 RSNQVH-YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         3 ~~l~~~-G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      +.|++. |++|++++|+.++++++.+.    .  .+..+.+|+.|.+++.++++       .+|++
T Consensus        40 ~~L~~~~g~~V~v~~R~~~ka~~la~~----~--~~~~~~~D~~d~~~l~~~l~-------~~DvV   92 (467)
T 2axq_A           40 DTLAANDDINVTVACRTLANAQALAKP----S--GSKAISLDVTDDSALDKVLA-------DNDVV   92 (467)
T ss_dssp             HHHHTSTTEEEEEEESSHHHHHHHHGG----G--TCEEEECCTTCHHHHHHHHH-------TSSEE
T ss_pred             HHHHhCCCCeEEEEECCHHHHHHHHHh----c--CCcEEEEecCCHHHHHHHHc-------CCCEE
Confidence            456666 78999999998876665433    1  25667789999887766542       57888

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=83.75  E-value=0.46  Score=33.19  Aligned_cols=54  Identities=7%  Similarity=0.080  Sum_probs=32.7

Q ss_pred             ccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            4 SNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      .+...|++|++++++.++++.+ +++   +. .   ..+|.++.+++.+.+.++..  +.+|++
T Consensus       165 ~~~~~G~~V~~~~~~~~~~~~~-~~~---g~-~---~~~d~~~~~~~~~~~~~~~~--~~~d~v  218 (333)
T 1v3u_A          165 IAKLKGCKVVGAAGSDEKIAYL-KQI---GF-D---AAFNYKTVNSLEEALKKASP--DGYDCY  218 (333)
T ss_dssp             HHHHTTCEEEEEESSHHHHHHH-HHT---TC-S---EEEETTSCSCHHHHHHHHCT--TCEEEE
T ss_pred             HHHHCCCEEEEEeCCHHHHHHH-Hhc---CC-c---EEEecCCHHHHHHHHHHHhC--CCCeEE
Confidence            3456789999999887766544 333   32 1   23577764555555555433  568877

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=80.24  E-value=0.3  Score=29.29  Aligned_cols=53  Identities=11%  Similarity=0.006  Sum_probs=32.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL   67 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   67 (147)
                      ++.|.+.|++|++++++.+..+.    +...+   ...+.+|.++++.+.++      .....|++
T Consensus        22 a~~l~~~g~~v~~~d~~~~~~~~----~~~~~---~~~~~~d~~~~~~l~~~------~~~~~d~v   74 (144)
T 2hmt_A           22 VKELHRMGHEVLAVDINEEKVNA----YASYA---THAVIANATEENELLSL------GIRNFEYV   74 (144)
T ss_dssp             HHHHHHTTCCCEEEESCHHHHHT----TTTTC---SEEEECCTTCHHHHHTT------TGGGCSEE
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHH----HHHhC---CEEEEeCCCCHHHHHhc------CCCCCCEE
Confidence            34567789999999998765432    22222   35567888876544332      12467887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	147
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-13
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-12
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-12
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-12
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-11
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	4e-11
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-11
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	6e-11
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	7e-11
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-10
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-10
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	4e-10
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	5e-10
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	4e-09
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-09
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	5e-09
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	6e-09
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-08
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-08
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-08
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	4e-08
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	6e-08
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-07
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-07
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-07
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	3e-07
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	3e-07
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	5e-07
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	1e-06
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-06
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-06
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-06
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	3e-06
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	5e-06
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	6e-06
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	6e-06
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	8e-06
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-05
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-05
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	3e-05
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-05
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-04
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-04
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-04
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.001

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (155), Expect = 1e-13
 Identities = 16/116 (13%), Positives = 37/116 (31%), Gaps = 5/116 (4%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCD-NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGL 70
              +          + K++G    +I +  D+++   + S+   + SQ   +DI      
Sbjct: 39  GCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAG 98

Query: 71  PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLL--QLSDSPRIVNASSSMGK 124
                 +L+ +    +     N              +  +  D   I+N +S  G 
Sbjct: 99  LARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH 154

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.2 bits (148), Expect = 1e-12
 Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 3/114 (2%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDN 73
               ++        K K  G   V   ++D ++   + S    V ++ G + IL      
Sbjct: 36  LWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGV 94

Query: 74  WY--KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
            Y   +        EK  + N   +    +A +P +  ++   IV  +S+ G +
Sbjct: 95  VYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV 148

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 60.4 bits (146), Expect = 2e-12
 Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 6/113 (5%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDN 73
                ++ G A   +L     D   +  LDVT       +V +   +FG +D L      
Sbjct: 34  LADVLDEEGAATARELG----DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGI 89

Query: 74  WYKMLTQTYELAEKC--IQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
              M  +T  +      ++ N  G     + +IP ++ +    IVN SS+ G 
Sbjct: 90  STGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL 142

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 60.0 bits (145), Expect = 3e-12
 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 14  ATTKDEKRGLAAVEKLKNSGC--DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---- 67
            T +  +R     +++  +G    NV   + DVT  A  D ++     +FGKLDIL    
Sbjct: 34  ITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNA 93

Query: 68  -GGLPDNWYKMLT-QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
              +PD+  K  T Q+ E  +  +  N      + +  +P L  +    +  +S + G
Sbjct: 94  GAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASG 151

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 3e-11
 Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 9/114 (7%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GG 69
            T +D  RG AAV++L+  G  +  FH LD+ D  S+ +L  F+  ++G LD+L    G 
Sbjct: 33  LTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGI 91

Query: 70  LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
                    T  +  AE  ++TN++G + +C  L+PL++     R+VN SS M 
Sbjct: 92  AFKV--ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSIMS 141

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 56.8 bits (137), Expect = 4e-11
 Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 10/133 (7%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
           D      A   ++N G   V+    DV+ P  V++    V S FG+ DIL    G  P  
Sbjct: 36  DLVPAPEAEAAIRNLG-RRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI 94

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEW- 132
                  T+E  +K  + N      M +A +P ++ +   RI+N +S+   LK       
Sbjct: 95  --PFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHY 152

Query: 133 --AKGVLSDWMRC 143
              K     + R 
Sbjct: 153 ISTKAANIGFTRA 165

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 56.8 bits (137), Expect = 4e-11
 Identities = 23/146 (15%), Positives = 40/146 (27%), Gaps = 26/146 (17%)

Query: 22  GLAAVEKLKNSGCDNVI-----------------FHLLDVTDPASVDSLVHFVSSQFGKL 64
           G A  +     G    +                 F  +D+ D       V   +   G++
Sbjct: 18  GRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRV 77

Query: 65  DIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
           D+L              LT       + ++ N      +       ++      IVN +S
Sbjct: 78  DVLVNNAAIAAPG--SALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVAS 135

Query: 121 SMGKLKNITNEW---AKGVLSDWMRC 143
             G      N     +KG L +  R 
Sbjct: 136 VQGLFAEQENAAYNASKGGLVNLTRS 161

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.5 bits (136), Expect = 6e-11
 Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 9/137 (6%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GG 69
              K   +G +A +K+           + +     + + LV      FG++D++    G 
Sbjct: 41  GDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGI 100

Query: 70  LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129
           L D        + E  +   + +  G+ ++  A    ++  +  RI+  +S+ G   N  
Sbjct: 101 LRDR--SFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG 158

Query: 130 NEW---AKGVLSDWMRC 143
                 AK  L      
Sbjct: 159 QANYSAAKLGLLGLANT 175

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 56.2 bits (135), Expect = 7e-11
 Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 10/134 (7%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDN 73
            +  G      + +     + F   DVT    V +LV    ++ GKLDI+    G L   
Sbjct: 39  ADDHGQKVCNNIGSPD--VISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTT 96

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE-- 131
            Y +L    E  ++ +  N YG   + +    ++  +    IV  +S             
Sbjct: 97  PYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHV 156

Query: 132 --WAKGVLSDWMRC 143
               K  +      
Sbjct: 157 YTATKHAVLGLTTS 170

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 55.8 bits (134), Expect = 1e-10
 Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 8/119 (6%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCD--NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---- 67
            T +  +R     + +  SG     V   + DVT     D +++    QFGK+D+L    
Sbjct: 34  ITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNA 93

Query: 68  -GGLPDNWYKMLT-QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
              +PD +    T Q  ++  K ++ N      M + + P L  S    +  +S   G 
Sbjct: 94  GAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP 152

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 55.1 bits (132), Expect = 2e-10
 Identities = 17/111 (15%), Positives = 32/111 (28%), Gaps = 2/111 (1%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILG--GLP 71
              +     +   EK+          +  DV++   V   +  + +  G +  L      
Sbjct: 38  VIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGV 97

Query: 72  DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
                    T+E        N +G    C A+  L         +  +SSM
Sbjct: 98  SVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSM 148

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 53.7 bits (128), Expect = 4e-10
 Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 5/107 (4%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGK--LDIL---GGLPDNWY 75
           R +    +LK+     V    L VT   S+D+ V  V    G   L +L    G+  ++ 
Sbjct: 37  RDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYG 96

Query: 76  KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
                   +  + +  N      + + L+PLL+ + S    +  S  
Sbjct: 97  TNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVS 143

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 53.9 bits (129), Expect = 5e-10
 Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 7/108 (6%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLD-------ILGGLPDN 73
           +    + +L+    DNV+  + DV              ++FGK+D       I       
Sbjct: 37  KSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTAL 96

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
                       ++    N  G     +A +P L  S    I   S++
Sbjct: 97  VDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNA 144

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 51.1 bits (122), Expect = 4e-09
 Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 10/130 (7%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYK 76
              AA ++L     +  +F   DV+  A    ++  V  + G L++L    G L      
Sbjct: 38  INEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGD-- 95

Query: 77  MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS---MGKLKNITNEWA 133
           M T   E   + ++ N       C+  I  ++      I+N +S    +   +      +
Sbjct: 96  METGRLEDFSRLLKINTESVFIGCQQGIAAMK-ETGGSIINMASVSSWLPIEQYAGYSAS 154

Query: 134 KGVLSDWMRC 143
           K  +S   R 
Sbjct: 155 KAAVSALTRA 164

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 4e-09
 Identities = 22/111 (19%), Positives = 35/111 (31%), Gaps = 10/111 (9%)

Query: 18  DEKRGLAAVEKL-KNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYK 76
           + + G+     L +       +F   DV D   +      V   FG+LDIL         
Sbjct: 36  NLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDIL------VNN 89

Query: 77  MLTQTYELAEKCIQTNYYGNKRMCEALIPLL---QLSDSPRIVNASSSMGK 124
                 +  EK +Q N           +  +      +   I+N SS  G 
Sbjct: 90  AGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL 140

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 50.8 bits (121), Expect = 5e-09
 Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 6/93 (6%)

Query: 14  ATTKDEKRGLAAVEKLKNSGC--DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---- 67
            T ++E R     +++  +G   + +   + DVT+ +  D +++   ++FGK+DIL    
Sbjct: 33  ITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNA 92

Query: 68  GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMC 100
           G    +      Q  EL +K  + N+     M 
Sbjct: 93  GANLADGTANTDQPVELYQKTFKLNFQAVIEMT 125

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 50.5 bits (120), Expect = 6e-09
 Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 3/113 (2%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDN 73
            +++          + +  G         D++D A V  L   +  ++G +D L      
Sbjct: 37  LSSRTAADLEKISLECRAEG-ALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGV 95

Query: 74  WY--KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
                +   T E  +  + TN  G   + +AL  L++   S  I   +S    
Sbjct: 96  GRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT 148

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 50.0 bits (119), Expect = 1e-08
 Identities = 35/138 (25%), Positives = 50/138 (36%), Gaps = 11/138 (7%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL----G 68
              ++E      + K +  G   V   + D +     + L+  VSS F GKLDIL    G
Sbjct: 37  TCARNEYELNECLSKWQKKG-FQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLG 95

Query: 69  GLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
            +       L  T E     I TN      + +   PLL+ S    I+  SS  G +   
Sbjct: 96  AIRSK--PTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS 153

Query: 129 TNEW---AKGVLSDWMRC 143
                   KG L+   R 
Sbjct: 154 VGSIYSATKGALNQLARN 171

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 48.8 bits (116), Expect = 2e-08
 Identities = 15/97 (15%), Positives = 25/97 (25%), Gaps = 4/97 (4%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLP 71
            T +    G  A + +       + F   D +D      L       FG +  L      
Sbjct: 35  ITGRHSDVGEKAAKSVGTPD--QIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI 92

Query: 72  DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQ 108
                +   T     K +  N  G        I  ++
Sbjct: 93  AVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMK 129

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 48.9 bits (116), Expect = 3e-08
 Identities = 19/113 (16%), Positives = 47/113 (41%), Gaps = 3/113 (2%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDN 73
             ++ +K   + V+++K+ G      +  DV+    +  +++ + ++   +DIL      
Sbjct: 39  CISRTQKSCDSVVDEIKSFG-YESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGI 97

Query: 74  WYKMLTQTY--ELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
               L      +  E  ++TN      + + +   +  +   RI+N SS +G 
Sbjct: 98  TRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGL 150

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 48.6 bits (115), Expect = 4e-08
 Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 5/130 (3%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLP--DNWY 75
             K     V +LK  G    +    D++ P+ V +L     S FG LD +      + W 
Sbjct: 40  SSKAAEEVVAELKKLG-AQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWC 98

Query: 76  KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM--GKLKNITNEWA 133
             L  T EL +K    N  G   + +  +   +      + ++ +++  G   +     +
Sbjct: 99  DELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGS 158

Query: 134 KGVLSDWMRC 143
           K  +  + R 
Sbjct: 159 KAAVEGFCRA 168

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 47.7 bits (113), Expect = 6e-08
 Identities = 23/115 (20%), Positives = 33/115 (28%), Gaps = 10/115 (8%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP-ASVDSLVHFVSSQFGKLDILGGLPD 72
                 +   A  E    +   N+ FH  DVT P A    L+  +  Q   +DI      
Sbjct: 34  VILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDI------ 87

Query: 73  NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP---RIVNASSSMGK 124
                        E+ I  N+ G      A++             I N  S  G 
Sbjct: 88  LINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF 142

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 2e-07
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 12/136 (8%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLP 71
              KDE  G A  ++L        +F L DVT    V +LV     +FG+LD +      
Sbjct: 35  ICDKDESGGRALEQELPG-----AVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGH 89

Query: 72  DNWYKMLTQTYELA-EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN 130
               +   +T      + ++ N  G   + +  +P L+      ++N SS +G +     
Sbjct: 90  HPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLR-KSQGNVINISSLVGAIGQAQA 148

Query: 131 E---WAKGVLSDWMRC 143
                 KG ++   + 
Sbjct: 149 VPYVATKGAVTAMTKA 164

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 46.2 bits (109), Expect = 2e-07
 Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 11/138 (7%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL----G 68
             ++++K     + + ++ G       + D++  +    L++ V++ F GKL+IL    G
Sbjct: 37  TCSRNQKELNDCLTQWRSKGFKV-EASVCDLSSRSERQELMNTVANHFHGKLNILVNNAG 95

Query: 69  GLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL--- 125
            +     +    T E     +  N+     +     P L+ S+   +V  SS  G L   
Sbjct: 96  IVIYK--EAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP 153

Query: 126 KNITNEWAKGVLSDWMRC 143
                   KG +    RC
Sbjct: 154 YEAVYGATKGAMDQLTRC 171

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 2e-07
 Identities = 22/129 (17%), Positives = 43/129 (33%), Gaps = 11/129 (8%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLPDNWYKML 78
           R  A ++ L    C  +    +D+ D  + +  +       G +D+L            L
Sbjct: 39  RTQADLDSLVRE-CPGIEPVCVDLGDWEATERAL----GSVGPVDLLVNNAAVALLQPFL 93

Query: 79  TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEW----AK 134
             T E  ++  + N     ++ + +   L     P  +   SS    + +TN       K
Sbjct: 94  EVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTK 153

Query: 135 GVLSDWMRC 143
           G L    + 
Sbjct: 154 GALDMLTKV 162

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 46.0 bits (108), Expect = 3e-07
 Identities = 15/94 (15%), Positives = 33/94 (35%), Gaps = 3/94 (3%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDN 73
               ++    A   ++  +G  + +   +DV+D   V + V       G  D++      
Sbjct: 30  IADYNDATAKAVASEINQAG-GHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGV 88

Query: 74  WY--KMLTQTYELAEKCIQTNYYGNKRMCEALIP 105
                + + T E+ +K    N  G     +A + 
Sbjct: 89  APSTPIESITPEIVDKVYNINVKGVIWGIQAAVE 122

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 45.8 bits (108), Expect = 3e-07
 Identities = 13/54 (24%), Positives = 24/54 (44%)

Query: 14 ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
            +++ +    A +KL        +    DV++   V  L+  V  +FGKLD +
Sbjct: 34 VASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTV 87

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 45.1 bits (106), Expect = 5e-07
 Identities = 27/120 (22%), Positives = 40/120 (33%), Gaps = 3/120 (2%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPD--NWY 75
            E    + +E++K  G    I    DVT  + V +LV     +FGKLD++       N  
Sbjct: 41  KEDEANSVLEEIKKVG-GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPV 99

Query: 76  KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKG 135
                +     K I TN  G        I     +D    V   SS+ +           
Sbjct: 100 SSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA 159

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 44.3 bits (104), Expect = 1e-06
 Identities = 20/130 (15%), Positives = 44/130 (33%), Gaps = 5/130 (3%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLP--DNWY 75
             +     V  +K +G  +      +V     +  +       FGKLDI+       ++ 
Sbjct: 52  STESAEEVVAAIKKNG-SDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFG 110

Query: 76  KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEW--A 133
            +   T E  ++    N  G   +       L++     ++ + +   K       +  +
Sbjct: 111 HVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGS 170

Query: 134 KGVLSDWMRC 143
           KG +  + RC
Sbjct: 171 KGAIETFARC 180

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.2 bits (104), Expect = 1e-06
 Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 11/126 (8%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYK 76
           R  + +  L    C  +    +D+ D  + +  +       G +D+L      +      
Sbjct: 37  RTNSDLVSLAKE-CPGIEPVCVDLGDWDATEKAL----GGIGPVDLLVNNAALVIMQ--P 89

Query: 77  MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGV 136
            L  T E  ++    N     ++ + +   +     P  +   SSM       N      
Sbjct: 90  FLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSS 149

Query: 137 LSDWMR 142
               M 
Sbjct: 150 TKGAMT 155

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 43.5 bits (102), Expect = 2e-06
 Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 8/112 (7%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLP 71
           A   +E     A E +           ++DV DPASV+       +  G+LD +      
Sbjct: 34  ACDIEEGPLREAAEAV------GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGI 87

Query: 72  DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
                      E  E  ++ N  G+  + +A    ++  +   IV  +S + 
Sbjct: 88  TRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY 139

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 43.6 bits (102), Expect = 2e-06
 Identities = 19/137 (13%), Positives = 47/137 (34%), Gaps = 8/137 (5%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDN 73
              + E+     +++L+ +G         DV     +++LV  V  ++G +D+L      
Sbjct: 31  VCARGEEGLRTTLKELREAG-VEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGR 89

Query: 74  WY--KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE 131
                      EL    ++TN  G  R+ + ++    + +       + +    K     
Sbjct: 90  PGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH 149

Query: 132 W-----AKGVLSDWMRC 143
                 +K  +  + + 
Sbjct: 150 AAPYSASKHGVVGFTKA 166

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 42.9 bits (100), Expect = 3e-06
 Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 6/129 (4%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWY--KML 78
             L A                LDVTD AS+D  V  +  ++G +DIL      +    ++
Sbjct: 37  INLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIV 96

Query: 79  TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIV----NASSSMGKLKNITNEWAK 134
             T E  ++    N  G   M +A+   +        +    + +   G+         K
Sbjct: 97  EITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK 156

Query: 135 GVLSDWMRC 143
             +    + 
Sbjct: 157 AAVISLTQS 165

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 42.3 bits (99), Expect = 5e-06
 Identities = 12/98 (12%), Positives = 30/98 (30%), Gaps = 6/98 (6%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77
                 ++L+        +  L          L+  V+S +G++D+L         +  +
Sbjct: 32  ESFKQKDELEAFA---ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPI 88

Query: 78  LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRI 115
                E     ++        +  A+   ++   S  I
Sbjct: 89  DKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHI 126

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 42.0 bits (98), Expect = 6e-06
 Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 2/104 (1%)

Query: 21  RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLPDNWYKML 78
                 + +     D   +  LDVT PA   + V    + FG L +L       N   + 
Sbjct: 38  ILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIE 97

Query: 79  TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
                  ++ +  N  G      A++  ++ +    I+N SS  
Sbjct: 98  DYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIE 141

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 42.1 bits (98), Expect = 6e-06
 Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 4/114 (3%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGL--- 70
               + +    A   ++  G      ++ DVT   +V   V  V   FGK+D L      
Sbjct: 34  LLDMNREALEKAEASVREKGV-EARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGY 92

Query: 71  PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
              +  +     +   + +  N  G   + +A+   +   +  RIVN +S  G 
Sbjct: 93  QGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGV 146

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 8e-06
 Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 10/118 (8%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCD----NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-- 67
             ++  +R  +A ++L+ +        VI    ++ +   V++LV      FGK++ L  
Sbjct: 41  IASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVN 100

Query: 68  --GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
             GG   +  + +  + +     ++TN  G   MC+A+           IVN      
Sbjct: 101 NGGGQFLSPAEHI--SSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK 156

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 40.9 bits (95), Expect = 2e-05
 Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 3/109 (2%)

Query: 18  DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
            E    +    L+ +    V+  + DV+D A V++ V   + +FG++D      G+    
Sbjct: 38  SEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQ 97

Query: 75  YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
               + T    +K +  N  G     E ++ +++   S  +VN +S  G
Sbjct: 98  NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG 146

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 6/132 (4%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDN 73
           A  ++E+    AV  L+       I  + DV+DP +V+++      +FG+L  +      
Sbjct: 34  AVDREERLLAEAVAALEA----EAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGV 89

Query: 74  WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWA 133
            +  L+    L                 A      L +   +V   S  G        +A
Sbjct: 90  AHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYA 149

Query: 134 --KGVLSDWMRC 143
             K  +    R 
Sbjct: 150 AGKLGVVGLART 161

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 40.0 bits (93), Expect = 3e-05
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 14 ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
           +  +       V++++  G         D+T    + +L  F  S+ GK+DIL
Sbjct: 40 VSDINADAANHVVDEIQQLG-GQAFACRCDITSEQELSALADFAISKLGKVDIL 92

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 39.8 bits (92), Expect = 4e-05
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 17  KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWY- 75
            D          L       V++   D++   +V  LV     Q G++DIL       + 
Sbjct: 37  GDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHT 96

Query: 76  -KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
             +     E  +  +  N         A +P ++     RI+N +S+ G
Sbjct: 97  ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG 145

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (89), Expect = 1e-04
 Identities = 14/120 (11%), Positives = 27/120 (22%), Gaps = 10/120 (8%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCD-NVIFHLLDVTDPASVDSLVHF----VSSQFGKLDILG 68
            + + E       E+L     D  V+    D+   A V  L+         +  +  +L 
Sbjct: 38  VSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLI 97

Query: 69  GLPDNWY-----KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
                        +              N      +    +   Q S        + S  
Sbjct: 98  NNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSL 157

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.4 bits (86), Expect = 2e-04
 Identities = 28/139 (20%), Positives = 46/139 (33%), Gaps = 17/139 (12%)

Query: 22  GLAAVEKLKNSGCD------------NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-- 67
           GLA  ++L   G               +    +DVTD  +VD     V    G +++L  
Sbjct: 20  GLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS 79

Query: 68  GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS---MGK 124
                    ++  T E  EK I  N  G  R+ +     +Q +   R++   S     G 
Sbjct: 80  NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI 139

Query: 125 LKNITNEWAKGVLSDWMRC 143
                   +K  +    R 
Sbjct: 140 GNQANYAASKAGVIGMARS 158

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 2e-04
 Identities = 15/136 (11%), Positives = 37/136 (27%), Gaps = 6/136 (4%)

Query: 14  ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLP 71
             ++      A  E++ +   + V     DV DP  V + V  +    G  +I+      
Sbjct: 54  IASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAG 113

Query: 72  DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE 131
           +        +    +        G   +   +   L  +       + +++         
Sbjct: 114 NFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFV 173

Query: 132 W----AKGVLSDWMRC 143
                AK  +    + 
Sbjct: 174 VPSASAKAGVEAMSKS 189

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 35.2 bits (80), Expect = 0.001
 Identities = 14/100 (14%), Positives = 28/100 (28%), Gaps = 8/100 (8%)

Query: 17  KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPAS----VDSLVHFVSSQFGKLDIL----G 68
             E      V +L  +   + +    D++  +S     + ++      FG+ D+L     
Sbjct: 34  HSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNAS 93

Query: 69  GLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQ 108
                       T   A+               A+ PL  
Sbjct: 94  AYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFL 133

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	147
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.96
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.96
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.96
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.95
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.95
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.95
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.95
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.95
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.95
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.95
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.95
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.95
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.95
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.94
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.94
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.94
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.94
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.94
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.94
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.94
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.94
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.93
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.93
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.93
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.93
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.92
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.92
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.92
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.92
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.92
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.92
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.92
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.91
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.91
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.91
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.91
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.9
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.9
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.9
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.89
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.89
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.89
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.89
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.89
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.88
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.88
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.87
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.87
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.87
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.84
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.83
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.81
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.8
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.75
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.74
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.73
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.72
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.71
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.69
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.57
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.53
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.49
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.46
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.43
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.41
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.7
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	98.58
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.5
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.33
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	98.19
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	98.19
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.16
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.08
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	98.02
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.88
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	97.83
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	97.68
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	97.57
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.51
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	97.41
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	97.22
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	97.06
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.9
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	96.69
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	96.54
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	96.07
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	95.78
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	95.59
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	94.93
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	94.9
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.84
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	94.65
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	93.05
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	92.47
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.38
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	92.38
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	91.0
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	90.3
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	90.02
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	88.55
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	84.51
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	83.49
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	83.14
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	82.32
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	82.06
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	81.4
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	80.11

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.2e-29  Score=169.56  Aligned_cols=142  Identities=15%  Similarity=0.127  Sum_probs=125.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +|+.|+++|++|++++|+.++++++.+++...++ ++..+.||++|+++++++++.+.+++|++|++   +|.. ...++
T Consensus        23 ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~-~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~-~~~~~  100 (244)
T d1yb1a_          23 TAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVV-YTSDL  100 (244)
T ss_dssp             HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCC-CCCCC
T ss_pred             HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeecccc-ccccc
Confidence            3678999999999999999999999999998876 69999999999999999999999999999999   7766 44677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++++++|+.|++++++.++|+|.++++|+||++||.++..+.+..      +++...|+.  +|+.|
T Consensus       101 ~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~~~~--~La~E  173 (244)
T d1yb1a_         101 FATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHK--TLTDE  173 (244)
T ss_dssp             GGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHHHHHHH--HHHHH
Confidence            78999999999999999999999999999999999999999999999886543      456677777  77765

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.96  E-value=3.3e-29  Score=169.27  Aligned_cols=141  Identities=16%  Similarity=0.119  Sum_probs=125.5

Q ss_pred             ccccccCCcE-------EEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC
Q 040927            2 KRSNQVHYSM-------GEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP   71 (147)
Q Consensus         2 ~~~l~~~G~~-------v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~   71 (147)
                      ++.|+++|++       |++++|+.+.++++.++++..+. ++..+.||++|+++++++++++.+++|++|++   ||..
T Consensus        18 a~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~   96 (240)
T d2bd0a1          18 ALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA-LTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVG   96 (240)
T ss_dssp             HHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC-EEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCC
T ss_pred             HHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcCCcceeecccccc
Confidence            5678899987       99999999999999999988876 78999999999999999999999999999999   7776


Q ss_pred             CcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhc
Q 040927           72 DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRR  145 (147)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~  145 (147)
                       ...++.+.+.++|++.+++|+.|+++++|.++|+|+++++|+|||+||.++..+.+...      ++...|+.  +|+.
T Consensus        97 -~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK~al~~lt~--~la~  173 (240)
T d2bd0a1          97 -RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVE--TMRL  173 (240)
T ss_dssp             -CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHH
T ss_pred             -cCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHHHHHHHHHH--HHHH
Confidence             55889999999999999999999999999999999998889999999999988876543      45666777  6666


Q ss_pred             c
Q 040927          146 S  146 (147)
Q Consensus       146 e  146 (147)
                      |
T Consensus       174 e  174 (240)
T d2bd0a1         174 Y  174 (240)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.96  E-value=7.4e-29  Score=169.14  Aligned_cols=143  Identities=16%  Similarity=0.104  Sum_probs=125.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+ +.++..+.||++|+++++++++++.+++|++|+|   ||...+..++
T Consensus        21 a~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~  100 (258)
T d1iy8a_          21 AVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPT  100 (258)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCch
Confidence            57899999999999999999999988887653 3368899999999999999999999999999999   8876566788


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+++.++|++.+++|+.++++++|.++|+|+++++|+|||+||.++..+.+..      +++...|+.  +|++|
T Consensus       101 ~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  173 (258)
T d1iy8a_         101 ESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTR--NSAVE  173 (258)
T ss_dssp             GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            89999999999999999999999999999999889999999999998876654      356667776  66665

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.95  E-value=4.2e-29  Score=170.58  Aligned_cols=142  Identities=18%  Similarity=0.116  Sum_probs=126.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.++++..+. ++..+.||++|+++++++++++.+++|++|++   +|......++.
T Consensus        22 a~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~  100 (260)
T d1zema1          22 ALRLAEEGTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQ  100 (260)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhccccccCccc
Confidence            578999999999999999999999999988876 69999999999999999999999999999999   78765567899


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                      +++.++|++.+++|+.+++++++.++|+|.++++|+|||+||.++..+.+...      +++..|++  +|++|
T Consensus       101 ~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~ltk--~lA~e  172 (260)
T d1zema1         101 DYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTE--TAALD  172 (260)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHHHHHHH--HHHHH
Confidence            99999999999999999999999999999998889999999999888765543      45666666  56555

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.95  E-value=1e-28  Score=167.88  Aligned_cols=141  Identities=16%  Similarity=0.133  Sum_probs=124.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.++++..+. ++..+.+|++|+++++++++++.+++|++|++   +|.. ...++.
T Consensus        27 a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~-~~~~~~  104 (251)
T d2c07a1          27 AKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGIT-RDNLFL  104 (251)
T ss_dssp             HHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCC-CCCCTT
T ss_pred             HHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeeccccc-cccccc
Confidence            678999999999999999999999999988876 69999999999999999999999999999999   6765 457788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++++++|+.++++++|.++|+|+++++|+|||+||.++..+.+..      ++++..|+.  +|++|
T Consensus       105 ~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr--~lA~e  176 (251)
T d2c07a1         105 RMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTK--SLAKE  176 (251)
T ss_dssp             TCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHHHHHH--HHHHH
Confidence            9999999999999999999999999999999989999999999988775544      355666766  56555

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=1.2e-28  Score=167.45  Aligned_cols=142  Identities=19%  Similarity=0.214  Sum_probs=121.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      |+.|+++|++|++++|+.++++++.+++.+..+.++..+.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        22 a~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~-~~~~~~  100 (251)
T d1vl8a_          22 AQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN-RRHPAE  100 (251)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence            678999999999999999999999888865543468999999999999999999999999999999   7876 458899


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC-cCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL-KNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++.+++|+.++++++|.++|+|+++++|+||+++|..+.. +.+..      +++...|+.  +|++|
T Consensus       101 ~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  173 (251)
T d1vl8a_         101 EFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTK--ALAKE  173 (251)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHhHHHHHH--HHHHH
Confidence            99999999999999999999999999999999999999999976543 43332      356666666  55555

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.95  E-value=1.6e-28  Score=166.30  Aligned_cols=141  Identities=17%  Similarity=0.162  Sum_probs=123.2

Q ss_pred             ccccccCCcEEEEee-cChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATT-KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++ |+.+.++++.++++..+. ++.++.||++|+++++++++++.+++|++|++   ||.. ...++
T Consensus        18 a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~-~~~~~   95 (244)
T d1edoa_          18 ALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGIT-RDTLL   95 (244)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccccccc-cccch
Confidence            578999999999875 567788889999988876 79999999999999999999999999999999   7766 45788


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.++++++|.++|+|+++++|+|||+||.++..+.+..      +++...|++  +|++|
T Consensus        96 ~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltk--~lA~e  168 (244)
T d1edoa_          96 IRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSK--TAARE  168 (244)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHChH--HHHHH
Confidence            99999999999999999999999999999999888999999999988776544      456667776  56655

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.95  E-value=1.8e-28  Score=167.44  Aligned_cols=142  Identities=15%  Similarity=0.084  Sum_probs=122.9

Q ss_pred             ccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+ .+.++++.+++...++.++.++.||++|+++++++++++.+++|++|++   ||.. ...++
T Consensus        21 A~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~-~~~~~   99 (260)
T d1x1ta1          21 ATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ-HTALI   99 (260)
T ss_dssp             HHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCcEEEeecccc-cCCch
Confidence            67899999999999997 5677888888876544478999999999999999999999999999999   7876 45788


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.++++++|.++|+|++++.|+|||+||.++..+.+...      ++...|++  +|++|
T Consensus       100 ~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  172 (260)
T d1x1ta1         100 EDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTK--VTALE  172 (260)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhhHHHhHH--HHHHH
Confidence            899999999999999999999999999999998889999999999988866543      45666666  56555

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.95  E-value=4.3e-28  Score=165.34  Aligned_cols=142  Identities=19%  Similarity=0.169  Sum_probs=124.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.++++..+. ++..+.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        19 a~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~-~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~-~~~~~~   96 (257)
T d2rhca1          19 ARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRP-GGGATA   96 (257)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCC-CCSCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEeccccc-CCCChH
Confidence            578999999999999999999999999998876 69999999999999999999999999999999   7876 457888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhh--ccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhccC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLL--QLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l--~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e~  147 (147)
                      +++.++|++.+++|+.++++++|.++|+|  .++++|+||+++|..+..+.+..      ++++..|++  +|++|+
T Consensus        97 ~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk--~lA~el  171 (257)
T d2rhca1          97 ELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTK--ALGLEL  171 (257)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHHT
T ss_pred             HcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHHHHHH--HHHHHh
Confidence            99999999999999999999999999974  55666899999999998876654      356677777  666664

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=4.6e-28  Score=164.94  Aligned_cols=140  Identities=16%  Similarity=0.157  Sum_probs=123.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      |+.|+++|++|++++|+.++++++.++++..++ ++.++.||++|+++++++++++.+++|++|++   ||...+ .++ 
T Consensus        28 a~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~-~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~-~~~-  104 (255)
T d1fmca_          28 AITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGP-KPF-  104 (255)
T ss_dssp             HHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCC-CCT-
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCC-Ccc-
Confidence            578999999999999999999999999998876 69999999999999999999999999999999   776633 444 


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++++++|+.++++++|.++|+|.++++|+|||+||.++..+.+..      +++...|+.  +|++|
T Consensus       105 e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  176 (255)
T d1fmca_         105 DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVR--NMAFD  176 (255)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHHHHHH--HHHHH
Confidence            7899999999999999999999999999999988999999999988876554      456667776  66655

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.95  E-value=5.5e-28  Score=164.62  Aligned_cols=141  Identities=18%  Similarity=0.189  Sum_probs=123.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.++++..+. ++..+.||++|+++++++++++.+++|++|++   ||.. +..++.
T Consensus        18 a~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~-~~~~~~   95 (255)
T d1gega_          18 ALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVA-PSTPIE   95 (255)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCC-CCBCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeccccc-ccCcHH
Confidence            578899999999999999999999999998876 69999999999999999999999999999999   7876 458899


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++.+++|+.|+++++|.++|+|.+++ +++||++||.++..+.+..      +++...+++  +|++|
T Consensus        96 ~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk--~lA~e  168 (255)
T d1gega_          96 SITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQ--TAARD  168 (255)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             HhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHhhHH--HHHHH
Confidence            999999999999999999999999999877654 5779999999988776554      356666666  56555

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.95  E-value=1.1e-27  Score=163.51  Aligned_cols=142  Identities=18%  Similarity=0.149  Sum_probs=125.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcC-CccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG-KLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. ++.++.||++|+++++++++++.++++ ++|++   ||.. ...++
T Consensus        25 a~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~-~~~~~  102 (259)
T d2ae2a_          25 VEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV-IYKEA  102 (259)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECCcee-ccCcc
Confidence            578899999999999999999999999988875 688999999999999999999999986 79999   7876 45788


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhccC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e~  147 (147)
                      .+.+.++|++++++|+.++++++|.++|+|.++++|+|||+||..+..+.+..      ++++..|++  +|++|+
T Consensus       103 ~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~el  176 (259)
T d2ae2a_         103 KDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTR--CLAFEW  176 (259)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHHT
T ss_pred             ccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHHHHHHHH--HHHHHh
Confidence            89999999999999999999999999999999999999999999998876554      356666776  666654

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.95  E-value=9.4e-28  Score=162.72  Aligned_cols=139  Identities=22%  Similarity=0.183  Sum_probs=118.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+...  +..+.++..+. ++..+.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        22 a~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~-~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~-~~~~~~   97 (247)
T d2ew8a1          22 AERFAVEGADIAIADLVPAP--EAEAAIRNLGR-RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIY-PLIPFD   97 (247)
T ss_dssp             HHHHHHTTCEEEEEESSCCH--HHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEECCchH--HHHHHHHHcCC-cEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChH
Confidence            57889999999999998643  33445556665 69999999999999999999999999999999   7876 558899


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++.+++|+.++++++|.++|+|+++++|+|||+||.++..+.+..      +++...|++  +|++|
T Consensus        98 ~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk--~lA~e  169 (247)
T d2ew8a1          98 ELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTR--ALASD  169 (247)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHHHHH--HHHHH
Confidence            9999999999999999999999999999999988999999999998876544      356666776  66655

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=9.4e-28  Score=162.31  Aligned_cols=138  Identities=20%  Similarity=0.185  Sum_probs=121.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.++++++.+++.    .++.++.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        23 a~~la~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~-~~~~~~   97 (244)
T d1nffa_          23 VRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL-NIGTIE   97 (244)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHTG----GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTT
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHhh----CcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCccc-CCCchh
Confidence            57899999999999999999888887774    257889999999999999999999999999999   7776 457888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++.+++|+.++++++|.++|.|.++++|+|||+||..+..+.+..      +++...|++  +|++|
T Consensus        98 ~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk--~lA~e  169 (244)
T d1nffa_          98 DYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTK--STALE  169 (244)
T ss_dssp             TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHHHH--HHHHH
Confidence            9999999999999999999999999999999988999999999998876554      356667776  66655

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=5.8e-28  Score=163.39  Aligned_cols=138  Identities=23%  Similarity=0.244  Sum_probs=120.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++..    +...+.+|++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        21 a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~-~~~~~~   95 (243)
T d1q7ba_          21 AETLAARGAKVIGTATSENGAQAISDYLGA----NGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGIT-RDNLLM   95 (243)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCC-CCCCGG
T ss_pred             HHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----CCcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhhhc-cccccc
Confidence            578899999999999999999998888742    57889999999999999999999999999999   7766 457888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.++++++|.++|+|+++++|+|||+||.++..+.+..      +++...|+.  ++++|
T Consensus        96 ~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  167 (243)
T d1q7ba_          96 RMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSK--SLARE  167 (243)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHHH--HHHHH
Confidence            9999999999999999999999999999999888999999999988776543      356666776  56655

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=1.5e-27  Score=162.76  Aligned_cols=141  Identities=23%  Similarity=0.155  Sum_probs=112.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc-CCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.++++++.+++...+. ++..+.||++++++++++++++.+++ |++|++   ||.. ...++
T Consensus        25 A~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~-~~~~~  102 (259)
T d1xq1a_          25 VEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI-RSKPT  102 (259)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC-------
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEeccCCCHHHHHHHHHHHHHHhCCCccccccccccc-CCCch
Confidence            577899999999999999999999999988776 69999999999999999999999998 789999   7776 45788


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.++++++|.++|+|++++.|+|||+||..+..+.+..      ++++..|+.  +|++|
T Consensus       103 ~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  175 (259)
T d1xq1a_         103 LDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLAR--NLACE  175 (259)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccccchhhhhH--HHHHH
Confidence            89999999999999999999999999999999888999999999998775543      356666766  56555

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.94  E-value=3.9e-27  Score=159.99  Aligned_cols=135  Identities=17%  Similarity=0.082  Sum_probs=118.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++... + ++.++.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        23 a~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~-~~~~~~   99 (251)
T d1zk4a1          23 ATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-D-QIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIA-VNKSVE   99 (251)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-T-TEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCC-CCCCTT
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHhCCC-C-cEEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccc-cccchh
Confidence            5788999999999999999999998888643 3 58999999999999999999999999999999   7776 457889


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCC-eEEEEcCCCCCCcCCCc------hhhhccccc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP-RIVNASSSMGKLKNITN------EWAKGVLSD  139 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~isS~~~~~~~~~~------~~~~~~~~~  139 (147)
                      +++.++|++.+++|+.+++++++.++|+|.+++.| +|||+||.++..+.+..      +++...|+.
T Consensus       100 ~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~  167 (251)
T d1zk4a1         100 ETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSK  167 (251)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             cccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHHhcchH
Confidence            99999999999999999999999999999988765 89999999998876554      345566666

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.94  E-value=3.8e-27  Score=160.80  Aligned_cols=141  Identities=21%  Similarity=0.154  Sum_probs=121.4

Q ss_pred             ccccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+. +.++++.++++..+. ++..+.||++|+++++++++++.+++|++|++   ||.. ...++
T Consensus        24 a~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~-~~~~~  101 (261)
T d1geea_          24 AIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLE-NPVSS  101 (261)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCG
T ss_pred             HHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccceec-CCcch
Confidence            678999999999999985 567888889988876 79999999999999999999999999999999   7876 44788


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCC-eEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP-RIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+++.++|++.+++|+.++++++|.++|+|.+++.| .||++||.++..+.+..      ++++..|++  +|++|
T Consensus       102 ~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  175 (261)
T d1geea_         102 HEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTE--TLALE  175 (261)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCccchhhHH--HHHHH
Confidence            899999999999999999999999999999887655 59999999988876544      356666666  56555

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.94  E-value=1.3e-27  Score=162.44  Aligned_cols=138  Identities=22%  Similarity=0.252  Sum_probs=120.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.++++++.+++   +. ++.++.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        22 a~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~-~~~~~~   96 (254)
T d1hdca_          22 ARQAVAAGARVVLADVLDEEGAATAREL---GD-AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIS-TGMFLE   96 (254)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHTT---GG-GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCSCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHh---CC-ceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCccc-cccccc
Confidence            6788999999999999998888777665   33 68999999999999999999999999999998   7776 457888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.++++++|.++|+|+++++|+|||+||.++..+.+..      +++...|++  +|++|
T Consensus        97 ~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  168 (254)
T d1hdca_          97 TESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSK--LAAVE  168 (254)
T ss_dssp             GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHHHH--HHHHH
Confidence            9999999999999999999999999999999888999999999998876554      356666766  66655

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=7.8e-27  Score=158.19  Aligned_cols=135  Identities=13%  Similarity=0.095  Sum_probs=115.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.. ++.+++      ...++.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        22 a~~la~~G~~V~~~~~~~~~~-~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~-~~~~~~   93 (248)
T d2d1ya1          22 AQAFAREGALVALCDLRPEGK-EVAEAI------GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIA-APGSAL   93 (248)
T ss_dssp             HHHHHHTTCEEEEEESSTTHH-HHHHHH------TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTT
T ss_pred             HHHHHHCCCEEEEEECCHHHH-HHHHHc------CCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCC-CCCChh
Confidence            678999999999999997653 344444      24678999999999999999999999999999   8876 447888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++.+++|+.++++++|.++|+|+++++|+|||+||..+..+.+..      +++...|++  +|++|
T Consensus        94 ~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk--~lA~e  165 (248)
T d2d1ya1          94 TVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTR--SLALD  165 (248)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHH--HHHHH
Confidence            9999999999999999999999999999999988999999999998876554      356667776  66665

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.4e-27  Score=160.86  Aligned_cols=137  Identities=22%  Similarity=0.230  Sum_probs=117.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++    . +..++.||++|+++++++++++.+++|++|++   ||......++.
T Consensus        23 a~~la~~Ga~V~i~~r~~~~~~~~~~~~----~-~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~   97 (250)
T d1ydea1          23 VRAFVNSGARVVICDKDESGGRALEQEL----P-GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPE   97 (250)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHC----T-TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHhc----C-CCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccccccccc
Confidence            5788999999999999998888776665    2 57889999999999999999999999999999   78664556788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++++++|+.++++++|.++|+|+++ +|+|||+||..+..+.+..      +++...|+.  +|++|
T Consensus        98 ~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  168 (250)
T d1ydea1          98 ETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTK--ALALD  168 (250)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHHHhhHHHHHH--HHHHH
Confidence            99999999999999999999999999999875 4999999999987776543      356667776  66655

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.93  E-value=2.4e-26  Score=156.18  Aligned_cols=137  Identities=19%  Similarity=0.115  Sum_probs=118.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. +..++.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        23 a~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~-~~~~~~   97 (253)
T d1hxha_          23 VKLLLGEGAKVAFSDINEAAGQQLAAEL---GE-RSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGIL-LPGDME   97 (253)
T ss_dssp             HHHHHHTTCEEEEECSCHHHHHHHHHHH---CT-TEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCC-CCBCTT
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHh---CC-CeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEeccccc-CCCCcc
Confidence            5778999999999999999999888887   33 58889999999999999999999999999999   7876 347888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|+|+++ +|+|||+||.++..+.+..      +++...|+.  ++++|
T Consensus        98 ~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  168 (253)
T d1hxha_          98 TGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAAVSALTR--AAALS  168 (253)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhHHHHHHHH--HHHHH
Confidence            99999999999999999999999999999765 4999999999998876554      345666666  55554

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.93  E-value=2.9e-26  Score=156.08  Aligned_cols=138  Identities=20%  Similarity=0.180  Sum_probs=118.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. ++..+.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        22 a~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~-~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~-~~~~~~   96 (256)
T d1k2wa_          22 AEAYVREGARVAIADINLEAARATAAEI---GP-AACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALF-DLAPIV   96 (256)
T ss_dssp             HHHHHHTTEEEEEEESCHHHHHHHHHHH---CT-TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHh---CC-ceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeecccc-cccccc
Confidence            6789999999999999999998888877   33 68899999999999999999999999999999   7776 457888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhcc-CCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQL-SDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++.+++|+.|+++++|.++|.|.+ .++|+|||+||.++..+.+..      ++++..|+.  +|++|
T Consensus        97 ~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  169 (256)
T d1k2wa_          97 EITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQ--SAGLN  169 (256)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHHHHH--HHHHH
Confidence            9999999999999999999999999998655 456899999999998886654      345666766  66655

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.93  E-value=3.4e-26  Score=156.75  Aligned_cols=141  Identities=18%  Similarity=0.133  Sum_probs=119.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc-chhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN-WYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~-~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+  ++.++.||++|+++++++++++.+++|++|++   ||.... ...+
T Consensus        23 a~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~  100 (268)
T d2bgka1          23 AKLFVRYGAKVVIADIADDHGQKVCNNIGSPD--VISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSI  100 (268)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT--TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSST
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC--ceEEEEccCCCHHHHHHHHHHHHHHcCCcceeccccccccCCCccc
Confidence            67889999999999999999999999987654  47889999999999999999999999999999   776533 2357


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc-------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN-------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~-------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.++++++|.++|+|.++++|+||++||..+..+.++.       +++...++.  +|++|
T Consensus       101 ~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  174 (268)
T d2bgka1         101 LEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTT--SLCTE  174 (268)
T ss_dssp             TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHHHHHhCHH--HHHHH
Confidence            78999999999999999999999999999999988999999999887754432       345566666  55554

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.1e-25  Score=153.36  Aligned_cols=142  Identities=15%  Similarity=0.099  Sum_probs=120.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      |+.|+++|++|++++|+.++++++.++++..+. .++..+.||++++++++++++.+.+++|++|++   ||.. ...++
T Consensus        27 A~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~-~~~~~  105 (257)
T d1xg5a_          27 ARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA-RPDTL  105 (257)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCC-CCCCT
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEeccccc-CCCcc
Confidence            678999999999999999999999999988753 368899999999999999999999999999999   7766 45788


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--CCeEEEEcCCCCCCcCCC--------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--SPRIVNASSSMGKLKNIT--------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~--------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|.|.+++  +|+||++||.++..+.|.        .+++...|+.  +|++|
T Consensus       106 ~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~sKaal~~ltr--~la~e  182 (257)
T d1xg5a_         106 LSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTE--GLRQE  182 (257)
T ss_dssp             TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHHHHHHHHhCHH--HHHHH
Confidence            8999999999999999999999999999987654  689999999988654322        2345666666  55544

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=4.2e-26  Score=154.10  Aligned_cols=135  Identities=19%  Similarity=0.070  Sum_probs=113.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++      +...+.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        22 a~~l~~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~-~~~~~~   94 (242)
T d1ulsa_          22 LELFAKEGARLVACDIEEGPLREAAEAV------GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGIT-RDNFHW   94 (242)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHTT------TCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCC-CCCCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHc------CCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCccc-ccCchh
Confidence            5788999999999999998888776655      36788999999999999999999999999999   8876 457888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++.+++|+.++++++|.++|+|.+++.+.|+++|| .+..+.++      ++++...|+.  +|++|
T Consensus        95 ~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKaal~~ltk--~lA~e  165 (242)
T d1ulsa_          95 KMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMAGVVGLTR--TLALE  165 (242)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence            999999999999999999999999999999988777777776 44445443      3456677776  66655

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.92  E-value=1.2e-25  Score=153.18  Aligned_cols=141  Identities=20%  Similarity=0.136  Sum_probs=123.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc-CCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+. .+.++.||++++++++++++++.+++ +.+|++   +|.. ...++
T Consensus        23 a~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~-~~~~~  100 (258)
T d1ae1a_          23 VEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVV-IHKEA  100 (258)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCC-CCCCT
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEecccccc-ccCcc
Confidence            567899999999999999999999999988876 58899999999999999999999998 678999   7766 44788


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++++++|+.+++++++.++|.|.+++.|+||++||..+..+.+...      ++...|+.  .|++|
T Consensus       101 ~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al~~lt~--~lA~e  173 (258)
T d1ae1a_         101 KDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTK--SLACE  173 (258)
T ss_dssp             TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHHHHHHHH--HHHHh
Confidence            899999999999999999999999999999999999999999999988876543      45566666  55555

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.92  E-value=2.8e-25  Score=152.50  Aligned_cols=143  Identities=17%  Similarity=0.141  Sum_probs=120.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCC--CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-cch
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC--DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-NWY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-~~~   75 (147)
                      ++.|+++|++|++++|+.++++++.+++...+.  .++..+.||++|+++++++++++.+++|++|++   ||... ...
T Consensus        21 a~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~  100 (274)
T d1xhla_          21 AVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGT  100 (274)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSC
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCCceEEEeeccccccccc
Confidence            578999999999999999999999999987653  258899999999999999999999999999999   67542 234


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +..+.+.++|++.+++|+.++++++|.++|+|.++++|.|+++||.++..+.+..      ++++..|++  +|++|
T Consensus       101 ~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~asKaal~~ltk--~lA~e  175 (274)
T d1xhla_         101 ANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTR--CTAID  175 (274)
T ss_dssp             CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhhhhHHHHHHH--HHHHH
Confidence            5566789999999999999999999999999999888889999888887765543      456667776  56555

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.92  E-value=1.1e-25  Score=151.53  Aligned_cols=130  Identities=19%  Similarity=0.128  Sum_probs=104.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+            .++..+.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        24 a~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~-~~~~~~   90 (237)
T d1uzma1          24 AQRLAADGHKVAVTHRGSGAP------------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLM   90 (237)
T ss_dssp             HHHHHHTTCEEEEEESSSCCC------------TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCC-C-----
T ss_pred             HHHHHHCCCEEEEEECCcchh------------cCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeeccc-ccccHh
Confidence            577889999999999986532            247889999999999999999999999999999   7876 457889


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++++++|+.++++++|.++|+|.+++.|+|||+||.++..+.+..      +++...|+.  +|++|
T Consensus        91 ~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  162 (237)
T d1uzma1          91 RMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMAR--SIARE  162 (237)
T ss_dssp             CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHHHH--HHHhh
Confidence            9999999999999999999999999999999999999999999998876543      356666776  55554

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.92  E-value=3.2e-25  Score=152.13  Aligned_cols=142  Identities=21%  Similarity=0.146  Sum_probs=115.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCC--CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC--DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---   73 (147)
                      |+.|+++|++|++++|+.++++++.+++.+.+.  .++..+.||++|+++++++++++.+++|++|++   ||...+   
T Consensus        22 a~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~  101 (272)
T d1xkqa_          22 AILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAF  101 (272)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTT
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeCCcccCcccc
Confidence            678999999999999999999999999987642  258899999999999999999999999999999   775522   


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcC-CCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS-SMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS-~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .....+.+.++|++.+++|+.++++++|.++|+|++++ |.+|+++| .++..+.+..      ++++..|++  +|++|
T Consensus       102 ~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~~~~Y~asKaal~~ltk--~lA~e  178 (272)
T d1xkqa_         102 GTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTR--STAID  178 (272)
T ss_dssp             CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCCcchhhhHHHHHHHHHH--HHHHH
Confidence            12345678889999999999999999999999998765 55665655 5666665543      456677777  66665

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.92  E-value=4.6e-25  Score=150.77  Aligned_cols=142  Identities=21%  Similarity=0.152  Sum_probs=111.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCC--CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC---c
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC--DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD---N   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~---~   73 (147)
                      ++.|+++|++|++++|+.+.++++.+++...+.  .++..+.||++|+++++++++++.+++|++|++   ||...   .
T Consensus        22 a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~  101 (264)
T d1spxa_          22 AVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQ  101 (264)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEeecccccccCCcc
Confidence            578999999999999999999999999987643  258899999999999999999999999999999   66542   2


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC-CCCcCCCc------hhhhccccchhhhhcc
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM-GKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~-~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ..++.+.+.++|++.+++|+.++++++|.++|+|++++ |.+|+++|+. +..+.+..      +++...|++  +|++|
T Consensus       102 ~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  178 (264)
T d1spxa_         102 SKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTR--NTAID  178 (264)
T ss_dssp             ------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchhhhhhhhhHHHHHH--HHHHH
Confidence            24566779999999999999999999999999998765 6677777765 45555433      356666776  66655

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.4e-26  Score=156.22  Aligned_cols=120  Identities=33%  Similarity=0.457  Sum_probs=107.2

Q ss_pred             ccccccC-CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVH-YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~-G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++ |++|++++|+.++++++.++++..+. ++.++.||++|.++++++++++.+++|++|+|   ||... ..+.
T Consensus        20 A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~-~~~~   97 (275)
T d1wmaa1          20 VRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAF-KVAD   97 (275)
T ss_dssp             HHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCC-CTTC
T ss_pred             HHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcCC-CCCc
Confidence            5678875 99999999999999999999998876 68999999999999999999999999999999   88763 3566


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL  125 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  125 (147)
                      .+.+.++|+.++++|+.|++++++.++|+|+++  |+|||+||+.+..
T Consensus        98 ~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--g~ivnisS~~~~~  143 (275)
T d1wmaa1          98 PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVR  143 (275)
T ss_dssp             CSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcccccccceec
Confidence            677889999999999999999999999999764  8999999977643

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.91  E-value=3e-25  Score=150.72  Aligned_cols=136  Identities=10%  Similarity=0.012  Sum_probs=114.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.....       .+..+|++++++++++++++.++||++|++   ||......++.
T Consensus        17 A~~la~~Ga~V~i~~r~~~~~~~~~~~~~-------~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~   89 (252)
T d1zmta1          17 ALRLSEAGHTVACHDESFKQKDELEAFAE-------TYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPID   89 (252)
T ss_dssp             HHHHHHTTCEEEECCGGGGSHHHHHHHHH-------HCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHhhhC-------cEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCChh
Confidence            56789999999999999887776644332       223589999999999999999999999999   77665567899


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++.+++|+.++++++|.++|+|+++++|+|||+||.++..+.+..      ++++..|++  +|++|
T Consensus        90 ~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  161 (252)
T d1zmta1          90 KYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLAN--ALSKE  161 (252)
T ss_dssp             GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHH--HHHHH
Confidence            9999999999999999999999999999999888999999999998876543      356667777  66655

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.5e-25  Score=152.14  Aligned_cols=142  Identities=18%  Similarity=0.099  Sum_probs=118.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhc----CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNS----GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|+++|++|++++|+.++++++.+++...    .+.++..+.||++|+++++++++++.+++|++|++   ||.. ..
T Consensus        29 a~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~-~~  107 (297)
T d1yxma1          29 VKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQ-FL  107 (297)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CC
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeecccc-cc
Confidence            5788999999999999999999999998753    22368999999999999999999999999999999   7766 45


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhccC
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e~  147 (147)
                      .++.+.+.++|++.+++|+.++++++|.++|.|.+++.|+||++||. +..+.+..      ++++..+++  ++++|+
T Consensus       108 ~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~~~~~~~~Y~asKaal~~ltk--~lA~el  183 (297)
T d1yxma1         108 SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGFPLAVHSGAARAGVYNLTK--SLALEW  183 (297)
T ss_dssp             CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTCCTTCHHHHHHHHHHHHHHH--HHHHHT
T ss_pred             CchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-ccccccccccchhHHHHHHHHHH--HHHHHh
Confidence            78889999999999999999999999999999999988999998764 44443332      356666666  566553

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.91  E-value=9.3e-25  Score=148.91  Aligned_cols=142  Identities=15%  Similarity=0.086  Sum_probs=116.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++....+.++..+.||++|+++++++++++.+++|++|++   ||.. ...++.
T Consensus        26 a~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~-~~~~~~  104 (260)
T d1h5qa_          26 TRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVS-VVKPAT  104 (260)
T ss_dssp             HHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCC-CCSCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcEeccccccc-ccCCHH
Confidence            678999999999999999998888888765433368999999999999999999999999999999   7766 457888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhcc-CCCCeEEEEcCCCCCCc-------------CCCchhhhccccchhhhh
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQL-SDSPRIVNASSSMGKLK-------------NITNEWAKGVLSDWMRCR  144 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~~-------------~~~~~~~~~~~~~~~al~  144 (147)
                      +.+.++|++.+++|+.+++++++.++|+|.+ ..++.|++++|..+...             |..+++++..++.  +|+
T Consensus       105 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~--~lA  182 (260)
T d1h5qa_         105 ELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK--GLA  182 (260)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHH--HHH
T ss_pred             HhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccchhhhhhhHHHHHH--HHH
Confidence            9999999999999999999999999999854 45577788777655432             2234456666766  555


Q ss_pred             cc
Q 040927          145 RS  146 (147)
Q Consensus       145 ~e  146 (147)
                      +|
T Consensus       183 ~e  184 (260)
T d1h5qa_         183 AE  184 (260)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=5.9e-24  Score=144.82  Aligned_cols=143  Identities=15%  Similarity=-0.036  Sum_probs=116.3

Q ss_pred             ccccc---cCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhh----cCCccEE---ecC
Q 040927            2 KRSNQ---VHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQ----FGKLDIL---GGL   70 (147)
Q Consensus         2 ~~~l~---~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~----~g~id~l---ag~   70 (147)
                      ++.|+   .+|++|++++|+.+.++++.+++...+ +.++..+.||++|+++++++++.+.+.    ++.+|++   +|.
T Consensus        23 A~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~  102 (259)
T d1oaaa_          23 APQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             HHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCC
T ss_pred             HHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhhhccCceEEEEecccc
Confidence            45565   479999999999999999999997654 336889999999999999999988763    3567777   664


Q ss_pred             C--CcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--CCeEEEEcCCCCCCcCCCc------hhhhccccch
Q 040927           71 P--DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--SPRIVNASSSMGKLKNITN------EWAKGVLSDW  140 (147)
Q Consensus        71 ~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~~------~~~~~~~~~~  140 (147)
                      .  .+..++.+.+.++|++++++|+.+++++++.++|+|++++  .|+|||+||.++..+.+..      +++...|+. 
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~-  181 (259)
T d1oaaa_         103 LGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQ-  181 (259)
T ss_dssp             CCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH-
T ss_pred             cccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCccchHHHHHHHHHHHHHH-
Confidence            3  2346788999999999999999999999999999999875  4799999999998886654      356666666 


Q ss_pred             hhhhcc
Q 040927          141 MRCRRS  146 (147)
Q Consensus       141 ~al~~e  146 (147)
                       +|++|
T Consensus       182 -~la~e  186 (259)
T d1oaaa_         182 -VLAAE  186 (259)
T ss_dssp             -HHHHH
T ss_pred             -HHHhC
Confidence             55544

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.7e-24  Score=150.30  Aligned_cols=139  Identities=13%  Similarity=0.086  Sum_probs=116.9

Q ss_pred             ccccccCCcEEEEeecC---------hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ec
Q 040927            2 KRSNQVHYSMGEATTKD---------EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GG   69 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~---------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag   69 (147)
                      ++.|+++|++|++++++         .+.++++.+++...+    ....+|++|.++++++++.+.+++|++|++   ||
T Consensus        24 A~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAG   99 (302)
T d1gz6a_          24 ALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG----GKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAG   99 (302)
T ss_dssp             HHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT----CEEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCC
T ss_pred             HHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc----cccccccchHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            57899999999998654         455677777776543    456789999999999999999999999999   88


Q ss_pred             CCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhh
Q 040927           70 LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRC  143 (147)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al  143 (147)
                      +. ...++.+++.++|++.+++|+.|+++++|.++|+|++++.|+|||+||.++..+.+..      ++++..|+.  +|
T Consensus       100 i~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~--~l  176 (302)
T d1gz6a_         100 IL-RDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLAN--TL  176 (302)
T ss_dssp             CC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH--HH
T ss_pred             cC-CCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHHHHHHHHHHHHH--HH
Confidence            87 4578999999999999999999999999999999999888999999999988776543      456677777  67


Q ss_pred             hccC
Q 040927          144 RRSI  147 (147)
Q Consensus       144 ~~e~  147 (147)
                      ++|+
T Consensus       177 a~E~  180 (302)
T d1gz6a_         177 VIEG  180 (302)
T ss_dssp             HHHT
T ss_pred             HHHH
Confidence            6664

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.6e-24  Score=149.48  Aligned_cols=140  Identities=21%  Similarity=0.176  Sum_probs=111.8

Q ss_pred             ccccccCCcEEEEe---ecChhhHH---HHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC
Q 040927            2 KRSNQVHYSMGEAT---TKDEKRGL---AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD   72 (147)
Q Consensus         2 ~~~l~~~G~~v~l~---~r~~~~~~---~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~   72 (147)
                      ++.|+++|++|+++   .|+.+..+   +..+++...+. ++..+.||++|++++.++++++.+  |.+|++   +|.. 
T Consensus        19 A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~--g~idilvnnag~~-   94 (285)
T d1jtva_          19 AVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPG-SLETLQLDVRDSKSVAAARERVTE--GRVDVLVCNAGLG-   94 (285)
T ss_dssp             HHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTT-SEEEEECCTTCHHHHHHHHHTCTT--SCCSEEEECCCCC-
T ss_pred             HHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCC-ceEEEeccccchHhhhhhhhhccc--cchhhhhhccccc-
Confidence            56789999875544   55544444   44444444554 699999999999999999988754  899998   6655 


Q ss_pred             cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ...++.+.+.++|++.+++|+.|++++++.++|+|+++++|+|||+||.+|..+.+..      +++...|++  +|+.|
T Consensus        95 ~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaal~~l~~--~la~E  172 (285)
T d1jtva_          95 LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCE--SLAVL  172 (285)
T ss_dssp             CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            4577889999999999999999999999999999999888999999999998886654      456777777  77766


Q ss_pred             C
Q 040927          147 I  147 (147)
Q Consensus       147 ~  147 (147)
                      +
T Consensus       173 l  173 (285)
T d1jtva_         173 L  173 (285)
T ss_dssp             H
T ss_pred             h
Confidence            3

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.90  E-value=9.1e-24  Score=145.08  Aligned_cols=138  Identities=18%  Similarity=0.064  Sum_probs=113.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc----
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW----   74 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~----   74 (147)
                      ++.|+++|++|++++|+.+.++++.+++   +. ++..+.+|++++++++++++++.+++|++|++   ||...+.    
T Consensus        22 a~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~   97 (276)
T d1bdba_          22 VDRFVAEGAKVAVLDKSAERLAELETDH---GD-NVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALV   97 (276)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHH---GG-GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHc---CC-CeeEEecccccHHHHHHHHHHHHHHhCCcccccccccccCCCCccc
Confidence            5789999999999999998888777665   33 68999999999999999999999999999999   7754222    


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ....+.+.++|++++++|+.++++++|.++|+|++++ |+||+++|..+..+.+..      ++++..|++  +|++|
T Consensus        98 ~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y~asKaal~~ltr--~lA~e  172 (276)
T d1bdba_          98 DLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVR--ELAFE  172 (276)
T ss_dssp             GSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence            2234455678999999999999999999999998764 899999999988776544      356667776  66655

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=6.9e-24  Score=144.11  Aligned_cols=136  Identities=17%  Similarity=0.134  Sum_probs=113.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.+.++++.+++.+.. +.++.++.||++|+++++++++++.+++|++|++   ||....    
T Consensus        20 a~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~~----   95 (254)
T d2gdza1          20 AEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE----   95 (254)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCS----
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcCeeccccccccc----
Confidence            57889999999999999999999999987653 3368899999999999999999999999999999   776522    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC---CCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD---SPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                           ++|++.+++|+.+++++++.++|+|.+++   +|+|||+||.++..+.+...      +++..|+++.+|+.|
T Consensus        96 -----~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltrs~ala~e  168 (254)
T d2gdza1          96 -----KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN  168 (254)
T ss_dssp             -----SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHHHHHHHHH
Confidence                 35889999999999999999999998764   47899999999988866543      456666664445554

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.89  E-value=2.2e-23  Score=141.15  Aligned_cols=137  Identities=18%  Similarity=0.169  Sum_probs=110.0

Q ss_pred             ccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHh--hcCCccEE---ecCCCcchhhhcc
Q 040927            6 QVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSS--QFGKLDIL---GGLPDNWYKMLTQ   80 (147)
Q Consensus         6 ~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~id~l---ag~~~~~~~~~~~   80 (147)
                      +++|++|++++|+.+.++++.+..+ .++ ++.++.||++|+++++++++.+.+  .++++|++   ||......++.+.
T Consensus        26 a~~g~~V~~~~r~~~~~~~~~~~~~-~~~-~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~  103 (248)
T d1snya_          26 PQPPQHLFTTCRNREQAKELEDLAK-NHS-NIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAV  103 (248)
T ss_dssp             SSCCSEEEEEESCTTSCHHHHHHHH-HCT-TEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGC
T ss_pred             HhCCCEEEEEECCHHHHHHHHHHHh-cCC-cEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccC
Confidence            5789999999999988887654444 344 699999999999999999999854  57899999   7876555677889


Q ss_pred             cHHHHHHhHHHhhhhHHHHHHHHHHhhccC-----------CCCeEEEEcCCCCCCcCC---------Cchhhhccccch
Q 040927           81 TYELAEKCIQTNYYGNKRMCEALIPLLQLS-----------DSPRIVNASSSMGKLKNI---------TNEWAKGVLSDW  140 (147)
Q Consensus        81 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~~~iv~isS~~~~~~~~---------~~~~~~~~~~~~  140 (147)
                      +.++|++++++|+.|++.+++.++|+|+++           .+|++|+++|..|..+..         .++++...|+. 
T Consensus       104 ~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKaal~~lt~-  182 (248)
T d1snya_         104 RSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK-  182 (248)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHH-
T ss_pred             CHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCCCChHHHHHHHHHHHHHHH-
Confidence            999999999999999999999999999753           368999999998765422         23345666666 


Q ss_pred             hhhhcc
Q 040927          141 MRCRRS  146 (147)
Q Consensus       141 ~al~~e  146 (147)
                       ++++|
T Consensus       183 -~la~e  187 (248)
T d1snya_         183 -SLSVD  187 (248)
T ss_dssp             -HHHHH
T ss_pred             -HHHHH
Confidence             45444

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.4e-23  Score=141.76  Aligned_cols=133  Identities=14%  Similarity=0.084  Sum_probs=109.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.++++.+++.     .+..+.+|++|++++++++    +++|++|++   ||.. ...++.
T Consensus        24 a~~la~~G~~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~----~~~g~iDilVnnAg~~-~~~~~~   93 (244)
T d1pr9a_          24 VQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDWEATERAL----GSVGPVDLLVNNAAVA-LLQPFL   93 (244)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHH----TTCCCCCEEEECCCCC-CCBCGG
T ss_pred             HHHHHHcCCEEEEEECCHHHHHHHHHhcC-----CCeEEEEeCCCHHHHHHHH----HHhCCceEEEeccccc-cccchh
Confidence            57889999999999999998888777652     4788899999999887665    567999999   7776 457889


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhh-ccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLL-QLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++++++.++|.| ++.+.|+||++||.++..+.+...      ++...++.  +|++|
T Consensus        94 ~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  166 (244)
T d1pr9a_          94 EVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTK--VMALE  166 (244)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHH--HHHHH
Confidence            99999999999999999999999999975 455679999999999988766543      45666666  55554

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.3e-23  Score=142.56  Aligned_cols=142  Identities=17%  Similarity=0.151  Sum_probs=122.9

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      +|+.|+++|++|++++|+.+.++++.+++....+.....+.+|+++.+.+...+..+.+.+|.+|++   +|.. ...++
T Consensus        30 iA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~-~~~~~  108 (269)
T d1xu9a_          30 MAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITN-TSLNL  108 (269)
T ss_dssp             HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCC-CCCCC
T ss_pred             HHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccc-ccccc
Confidence            3678999999999999999999999998877655578899999999999999999999999999998   6655 44677


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++++++|+.|++.+++.++|+|+++ +|+||++||.++..+.+..      +++...|+.  +|+.|
T Consensus       109 ~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKaal~~~~~--~La~E  180 (269)
T d1xu9a_         109 FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFS--SIRKE  180 (269)
T ss_dssp             CCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            788999999999999999999999999999754 5999999999999887654      456777777  67665

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=2.3e-23  Score=140.59  Aligned_cols=133  Identities=14%  Similarity=0.085  Sum_probs=109.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.++++++.+++.     .+..+.||++|++++++++    +++|++|++   ||.. ...++.
T Consensus        22 a~~la~~Ga~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~----~~~g~iDilVnnAg~~-~~~~~~   91 (242)
T d1cyda_          22 VKALHASGAKVVAVTRTNSDLVSLAKECP-----GIEPVCVDLGDWDATEKAL----GGIGPVDLLVNNAALV-IMQPFL   91 (242)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHH----TTCCCCSEEEECCCCC-CCBCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHhcC-----CCeEEEEeCCCHHHHHHHH----HHcCCCeEEEECCccc-cchhHH
Confidence            57899999999999999988887776652     4778899999999876654    567999999   7876 457899


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhc-cCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQ-LSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++.+++|+.++++++|.++|.|. +..+|+||++||..+..+.+..      ++++..|+.  +|++|
T Consensus        92 ~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  164 (242)
T d1cyda_          92 EVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTK--AMAME  164 (242)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             HHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHH--HHHHH
Confidence            999999999999999999999999999865 4456899999999988776544      345666666  66655

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.88  E-value=3.1e-23  Score=141.20  Aligned_cols=139  Identities=20%  Similarity=0.177  Sum_probs=114.9

Q ss_pred             ccccccCCcEEEEee-cChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATT-KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++ |+.+.++++.++++..+. ++..+.||++|+++++++++++.+++|++|++   +|.. ...++
T Consensus        23 a~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~-~~~~~  100 (259)
T d1ja9a_          23 AIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGME-VWCDE  100 (259)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCC-CCCCG
T ss_pred             HHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCC-CceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEeccccc-ccccc
Confidence            578999999999876 456668888999988886 69999999999999999999999999999999   7776 55788


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC-cCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL-KNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.++++++|.++|+|+++  |++++++|..+.. +.+..      +++...++.  +|++|
T Consensus       101 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~asK~al~~l~r--~lA~e  172 (259)
T d1ja9a_         101 LEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCR--AFAVD  172 (259)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence            899999999999999999999999999999765  6777777766544 34333      345566666  56555

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.88  E-value=3.7e-23  Score=139.44  Aligned_cols=136  Identities=18%  Similarity=0.126  Sum_probs=106.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+++..+++   ++ ++.++.||++++++++++++++.+++|++|++   ||.. ...++.
T Consensus        22 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~-~~~~~~   96 (241)
T d2a4ka1          22 LDLFAREGASLVAVDREERLLAEAVAAL---EA-EAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVA-HSALSW   96 (241)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHTC---CS-SEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGT-TTTC--
T ss_pred             HHHHHHCCCEEEEEECCHHHHHHHHHHc---CC-ceEEEEecCCCHHHHHHHHHHHHHHhCCccEeccccccc-cccchh
Confidence            5789999999999999998776655544   44 68899999999999999999999999999999   6766 458888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc-----CCCchhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK-----NITNEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----~~~~~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.+++.++|.++|+|.+.  +.|+++||.+...+     +...+++...|+.  +|++|
T Consensus        97 ~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss~a~~~~~~~~~Y~~sK~al~~lt~--~lA~e  165 (241)
T d2a4ka1          97 NLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGSVAGLGAFGLAHYAAGKLGVVGLAR--TLALE  165 (241)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECCCTTCCHHHHHHHHHCSSHHHHHHH--HHHHH
T ss_pred             hhhccccccccccccccccccccccccccccc--cceeeccccccccccCccccchhhHHHHHHHH--HHHHH
Confidence            99999999999999999999999999998765  55666666554322     2223456677777  66655

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.87  E-value=4.4e-22  Score=136.35  Aligned_cols=139  Identities=15%  Similarity=0.128  Sum_probs=115.4

Q ss_pred             ccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+ .+.++++.++++..+. ++.++.||++|++++.++++++.+.+|++|++   +|.. ...++
T Consensus        35 a~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~-~~~~~  112 (272)
T d1g0oa_          35 AMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV-SFGHV  112 (272)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCG
T ss_pred             HHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCC-ceeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccc-hhhhh
Confidence            57889999999999887 5667888888888876 69999999999999999999999999999999   6655 45788


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC-------chhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT-------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-------~~~~~~~~~~~~al~~e  146 (147)
                      .+.+.++|++.+++|+.+++++++.++|+|.++  |++++++|+.+..+..+       .++++..+++  +|++|
T Consensus       113 ~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~~~~~~~~Y~asKaal~~ltk--~lA~e  184 (272)
T d1g0oa_         113 KDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAVYSGSKGAIETFAR--CMAID  184 (272)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhhhhhHHHHHhhhccceeeeeccccccccccc--cccccccccccccccccchhhHHHHHHHHHHHHH--HHHHH
Confidence            899999999999999999999999999999865  78899988776543222       2345556666  55554

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.87  E-value=1.3e-22  Score=137.67  Aligned_cols=134  Identities=19%  Similarity=0.127  Sum_probs=108.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC-CHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT-DPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      |++|+++|++|++++|+.++.+++.+.....+..++.++.+|++ +.++++++++.+.+++|++|+|   ||..      
T Consensus        22 A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~------   95 (254)
T d1sbya1          22 SRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL------   95 (254)
T ss_dssp             HHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCC------
T ss_pred             HHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCC------
Confidence            67899999999999998777665544444444446889999998 6778999999999999999999   7654      


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC---CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD---SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                         +.+.|++++++|+.|++++++.++|.|.+++   .|+|||+||.++..+.+..      +++...|+.  +|++|
T Consensus        96 ---~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~t~--~la~e  168 (254)
T d1sbya1          96 ---DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTN--SLAKL  168 (254)
T ss_dssp             ---CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ---CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHHHH--HHHhh
Confidence               3467899999999999999999999998753   4889999999998776544      356667776  66655

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=3e-22  Score=136.05  Aligned_cols=139  Identities=17%  Similarity=0.061  Sum_probs=111.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---ch
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---WY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~~   75 (147)
                      ++.|+++|++|++++|+....++. +++...++ +...+.+|++|+++++++++.+.+++|++|++   +|....   ..
T Consensus        27 A~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~  104 (256)
T d1ulua_          27 AAKLKEAGAEVALSYQAERLRPEA-EKLAEALG-GALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEG  104 (256)
T ss_dssp             HHHHHHTTCEEEEEESSGGGHHHH-HHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSS
T ss_pred             HHHHHHCCCEEEEEeCcHHHHHHH-HHhhhccC-cccccccccCCHHHHHHHHHHHHHhcCCceEEEecccccccccccc
Confidence            578999999999999987554444 44444443 47889999999999999999999999999999   665422   23


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ++.+.+.++|+..+++|+.+++.+++.++|.|++.  |+|||+||..+..+.+..      +++...++.  ++++|
T Consensus       105 ~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr--~lA~e  177 (256)
T d1ulua_         105 RYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--GGIVTLTYYASEKVVPKYNVMAIAKAALEASVR--YLAYE  177 (256)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             chhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC--CEEEEEeehHhcCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence            46688899999999999999999999999999764  899999999998876554      456666666  55554

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.84  E-value=1.9e-21  Score=131.63  Aligned_cols=140  Identities=18%  Similarity=0.178  Sum_probs=110.7

Q ss_pred             ccccccCCc--EEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCC--ccEE---ecCCCcc
Q 040927            2 KRSNQVHYS--MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGK--LDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~--~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~--id~l---ag~~~~~   74 (147)
                      ++.|+++|+  +|++++|+.+.++++    .+..+.++.++.||++|+++++++++.+.+.++.  +|++   ||.....
T Consensus        20 a~~la~~G~~~~Vi~~~R~~~~~~~l----~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~   95 (250)
T d1yo6a1          20 VQQLVKDKNIRHIIATARDVEKATEL----KSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSY   95 (250)
T ss_dssp             HHHHHTCTTCCEEEEEESSGGGCHHH----HTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCB
T ss_pred             HHHHHHCCCCCEEEEEeCCHHHHHHH----HHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCC
Confidence            678899996  689999999887654    3333346999999999999999999999988764  9999   8876566


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-----------CCCeEEEEcCCCCCCc-------------CCCc
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-----------DSPRIVNASSSMGKLK-------------NITN  130 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~~~iv~isS~~~~~~-------------~~~~  130 (147)
                      .++.+.+.++|++++++|+.|++++++.++|+|+++           ..+.+++++|..+..+             |..+
T Consensus        96 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aS  175 (250)
T d1yo6a1          96 GTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMS  175 (250)
T ss_dssp             CTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHH
T ss_pred             CccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcccccchhHHHHHHH
Confidence            777889999999999999999999999999999754           2478999988665443             2333


Q ss_pred             hhhhccccchhhhhccC
Q 040927          131 EWAKGVLSDWMRCRRSI  147 (147)
Q Consensus       131 ~~~~~~~~~~~al~~e~  147 (147)
                      +++...|+.  +|++|+
T Consensus       176 Kaal~~l~~--~la~el  190 (250)
T d1yo6a1         176 KAAINMFGR--TLAVDL  190 (250)
T ss_dssp             HHHHHHHHH--HHHHHT
T ss_pred             HHHHHHHHH--HHHHHh
Confidence            456667766  666654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.83  E-value=3.9e-21  Score=128.94  Aligned_cols=126  Identities=14%  Similarity=0.049  Sum_probs=100.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.+.+++       .+   ..++.||+++.      ++.+.+++|++|++   ||.. ...++.
T Consensus        21 a~~l~~~Ga~V~~~~r~~~~l~~-------~~---~~~~~~Dv~~~------~~~~~~~~g~iD~lVnnAG~~-~~~~~~   83 (234)
T d1o5ia_          21 ADVLSQEGAEVTICARNEELLKR-------SG---HRYVVCDLRKD------LDLLFEKVKEVDILVLNAGGP-KAGFFD   83 (234)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHH-------TC---SEEEECCTTTC------HHHHHHHSCCCSEEEECCCCC-CCBCGG
T ss_pred             HHHHHHCCCEEEEEECCHHHHHh-------cC---CcEEEcchHHH------HHHHHHHhCCCcEEEeccccc-CCcchh
Confidence            57889999999999999765432       22   45678999863      34566778999999   7766 457888


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +++.++|++.+++|+.++++++|.++|+|++++.|+||+++|..+..+.+..      +++...|++  ++++|
T Consensus        84 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk--~lA~e  155 (234)
T d1o5ia_          84 ELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLK--TLSFE  155 (234)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHH--HHHHH
Confidence            9999999999999999999999999999999888999999998887765543      345566666  56555

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.9e-20  Score=124.96  Aligned_cols=139  Identities=18%  Similarity=0.159  Sum_probs=114.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ec-----CCCc
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GG-----LPDN   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag-----~~~~   73 (147)
                      ++.|+++|++|++++|+.+.++++.+++.   . +.....+|+.+.++++..+..+...++.+|.+   ++     ....
T Consensus        22 a~~la~~G~~V~~~~r~~~~~~~~~~~l~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (248)
T d2o23a1          22 AERLVGQGASAVLLDLPNSGGEAQAKKLG---N-NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYN   97 (248)
T ss_dssp             HHHHHHTTCEEEEEECTTSSHHHHHHHHC---T-TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEE
T ss_pred             HHHHHHCCCEEEEEeCChHHHHHHHHHhC---C-CcccccccccccccccccccccccccccccccccccccccCCCccc
Confidence            67899999999999999999888888773   2 57889999999999999999999888888887   22     2223


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC------CCCeEEEEcCCCCCCcCCCc------hhhhccccchh
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS------DSPRIVNASSSMGKLKNITN------EWAKGVLSDWM  141 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~  141 (147)
                      ..++.+.+.++|++.+++|+.++++++++++|+|..+      ++|+|||+||..+..+.+..      +++...|+.  
T Consensus        98 ~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~--  175 (248)
T d2o23a1          98 LKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL--  175 (248)
T ss_dssp             TTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHH--
T ss_pred             ccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCchHHHHHHHHHHHHHH--
Confidence            3567788999999999999999999999999998654      56899999999988775544      356677777  


Q ss_pred             hhhcc
Q 040927          142 RCRRS  146 (147)
Q Consensus       142 al~~e  146 (147)
                      +|++|
T Consensus       176 ~la~e  180 (248)
T d2o23a1         176 PIARD  180 (248)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66665

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.5e-20  Score=126.88  Aligned_cols=132  Identities=18%  Similarity=0.143  Sum_probs=103.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+++.++++    .+..  .+....+|+.+.+.++.    ..+.++.+|++   +|.. +..++.
T Consensus        23 a~~la~~G~~Vi~~~r~~~~l~~~----~~~~--~~~~~~~d~~~~~~~~~----~~~~~~~id~lVn~ag~~-~~~~~~   91 (245)
T d2ag5a1          23 ALAFAREGAKVIATDINESKLQEL----EKYP--GIQTRVLDVTKKKQIDQ----FANEVERLDVLFNVAGFV-HHGTVL   91 (245)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHGGG----GGST--TEEEEECCTTCHHHHHH----HHHHCSCCSEEEECCCCC-CCBCGG
T ss_pred             HHHHHHcCCEEEEEeCCHHHHHHH----Hhcc--CCceeeeeccccccccc----cccccccceeEEeccccc-CCCChh
Confidence            678999999999999998766554    3333  37788889887665554    45566899998   7776 447788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC-cCCCc------hhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL-KNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      +.+.++|++.+++|+.++++++|.++|+|.+++.|+||++||..+.. +.+..      +++...++.  +|++|
T Consensus        92 ~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r--~lA~e  164 (245)
T d2ag5a1          92 DCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTK--SVAAD  164 (245)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHH--HHHHH
T ss_pred             hCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHH--HHHHH
Confidence            99999999999999999999999999999999889999999987754 43332      345566666  55554

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.75  E-value=2.1e-18  Score=119.03  Aligned_cols=142  Identities=10%  Similarity=-0.036  Sum_probs=115.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      |+.|+++|++|++++|+.++++++.+++....+.++..+.||+++++++++++..+.++++++|++   +|.. ...++.
T Consensus        42 A~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~-~~~~~~  120 (294)
T d1w6ua_          42 TTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGN-FISPTE  120 (294)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCC-CCSCGG
T ss_pred             HHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhc-cccccc
Confidence            678999999999999999999999988876544468899999999999999999999999999999   6765 457788


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhcc-CCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQL-SDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e  146 (147)
                      ..+.++|+..+.+|+.+++.+.+...+.+.. ...+.+++++|..+..+.+.      .++++..|+.  .+++|
T Consensus       121 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasKaal~~ltk--~lA~e  193 (294)
T d1w6ua_         121 RLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSK--SLAAE  193 (294)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             cchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHHHHHHHHHH--HHHHH
Confidence            8999999999999999999998888877664 44566788888776655433      3456666666  55554

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.74  E-value=1.2e-18  Score=118.29  Aligned_cols=124  Identities=18%  Similarity=0.027  Sum_probs=102.5

Q ss_pred             ccccccCCc-EEEEeecCh---hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYS-MGEATTKDE---KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~-~v~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|+++|+ +|++++|+.   +..+++.+++...+. ++.++.||++|+++++++++.+.+. +++|++   +|.. ..
T Consensus        26 a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~-~v~~~~~Dv~d~~~~~~~~~~i~~~-~~i~~vv~~ag~~-~~  102 (259)
T d2fr1a1          26 ARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA-RTTVAACDVTDRESVRELLGGIGDD-VPLSAVFHAAATL-DD  102 (259)
T ss_dssp             HHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHTSCTT-SCEEEEEECCCCC-CC
T ss_pred             HHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccc-cccccccccchHHHHHHhhcccccc-ccccccccccccc-cc
Confidence            578899999 589999874   457778888887775 7999999999999999999988665 688888   6665 44


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCchh
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEW  132 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  132 (147)
                      .++.+.+.++|+..+++|+.+++++.+.+.    ..+.+.||++||+++..+.++...
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~----~~~~~~iv~~SS~a~~~g~~~~~~  156 (259)
T d2fr1a1         103 GTVDTLTGERIERASRAKVLGARNLHELTR----ELDLTAFVLFSSFASAFGAPGLGG  156 (259)
T ss_dssp             CCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSCCSEEEEEEEHHHHTCCTTCTT
T ss_pred             cccccccHHHHHHHhhhhccchhHHHHHhh----ccCCceEeeecchhhccCCcccHH
Confidence            788899999999999999999999888644    345689999999999888766553

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.73  E-value=1.7e-18  Score=121.21  Aligned_cols=141  Identities=6%  Similarity=0.015  Sum_probs=105.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCC-----------CceEEE--------------------EecCCCHHHH
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-----------DNVIFH--------------------LLDVTDPASV   50 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-----------~~~~~~--------------------~~D~~~~~~~   50 (147)
                      ++.|+++|++|++++++................           ......                    .+|+++.+++
T Consensus        21 A~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  100 (329)
T d1uh5a_          21 AKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTI  100 (329)
T ss_dssp             HHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCCHHHHTSHHHHTCCCCSH
T ss_pred             HHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccchhhhhhhhhhhhhHHHH
Confidence            578999999999999987654443333221110           011222                    2477788999


Q ss_pred             HHHHHHHHhhcCCccEE---ecCCCc-chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           51 DSLVHFVSSQFGKLDIL---GGLPDN-WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        51 ~~~~~~~~~~~g~id~l---ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                      +++++.+.+.||++|++   +|...+ ..++.+++.++|++.+++|+++++.++|.++|+|++.  |+||++||.++..+
T Consensus       101 ~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~--GsIv~iss~~~~~~  178 (329)
T d1uh5a_         101 EDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQ--SSIISLTYHASQKV  178 (329)
T ss_dssp             HHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSC
T ss_pred             HHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccc--cccccceeehhccc
Confidence            99999999999999999   565433 3578899999999999999999999999999999754  89999999988877


Q ss_pred             CCC-------chhhhccccchhhhhcc
Q 040927          127 NIT-------NEWAKGVLSDWMRCRRS  146 (147)
Q Consensus       127 ~~~-------~~~~~~~~~~~~al~~e  146 (147)
                      .|.       ++++...++.  +|+.|
T Consensus       179 ~p~y~~~y~asKaal~~ltr--~lA~E  203 (329)
T d1uh5a_         179 VPGYGGGMSSAKAALESDTR--VLAYH  203 (329)
T ss_dssp             CTTCTTTHHHHHHHHHHHHH--HHHHH
T ss_pred             ccccchhhhhhhccccccch--hhHHH
Confidence            654       2345666666  55544

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.72  E-value=2.2e-17  Score=113.13  Aligned_cols=142  Identities=13%  Similarity=0.001  Sum_probs=103.1

Q ss_pred             ccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEE-----------------EEecCCCHHHHHHHHHHHHhhcCC
Q 040927            2 KRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIF-----------------HLLDVTDPASVDSLVHFVSSQFGK   63 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~-----------------~~~D~~~~~~~~~~~~~~~~~~g~   63 (147)
                      ++.|+++|++|++++++ .+.++++.+++...++.....                 +.+|++++++++++++++.+++|+
T Consensus        19 A~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~~v~~~~~~~~~~~G~   98 (284)
T d1e7wa_          19 AEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGR   98 (284)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999998764 566777888887655433444                 446699999999999999999999


Q ss_pred             ccEE---ecCCCcchhhhcccHHH--------------HHHhHHHhhhhHHHHHHHHHHhh------ccCCCCeEEEEcC
Q 040927           64 LDIL---GGLPDNWYKMLTQTYEL--------------AEKCIQTNYYGNKRMCEALIPLL------QLSDSPRIVNASS  120 (147)
Q Consensus        64 id~l---ag~~~~~~~~~~~~~~~--------------~~~~~~~n~~~~~~l~~~~~~~l------~~~~~~~iv~isS  120 (147)
                      +|++   ||... ..++.+.+.++              |...+++|+.+++++++.+.+.+      .+...++|++++|
T Consensus        99 iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s  177 (284)
T d1e7wa_          99 CDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD  177 (284)
T ss_dssp             CCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECC
T ss_pred             CCEEEecCCccC-CCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHHhcCCCCccccccc
Confidence            9999   77653 24554554444              44589999999999999988764      3445678999999


Q ss_pred             CCCCCcCCCc------hhhhccccchhhhhcc
Q 040927          121 SMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus       121 ~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ..+..+.++.      +++...++.  ++++|
T Consensus       178 ~~~~~~~~~~~~Y~asKaal~~lt~--~lA~e  207 (284)
T d1e7wa_         178 AMTNQPLLGYTIYTMAKGALEGLTR--SAALE  207 (284)
T ss_dssp             TTTTSCCTTCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             ccccCCccceeeeccccccchhhhH--HHHHH
Confidence            8887765543      456666666  55554

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.71  E-value=3.2e-18  Score=114.64  Aligned_cols=131  Identities=8%  Similarity=-0.106  Sum_probs=101.2

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhh--cCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQ--FGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++|+....          . .......+|+.+.+......+.+...  +|++|++   ||......+
T Consensus        19 a~~l~~~G~~V~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~   87 (235)
T d1ooea_          19 LEFFKKNGYTVLNIDLSANDQ----------A-DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSA   87 (235)
T ss_dssp             HHHHHHTTEEEEEEESSCCTT----------S-SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCT
T ss_pred             HHHHHHCCCEEEEEECCchhc----------c-cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCcccccccc
Confidence            578899999999999986431          1 13456667888888887777777664  5899999   786544455


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhccC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e~  147 (147)
                      +.+.+.++|+.++++|+.+++.+++.++|+|++.  |+|||+||..+..+.+..      +++...|++  +|+.|+
T Consensus        88 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~e~  160 (235)
T d1ooea_          88 SSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTS--SLAAKD  160 (235)
T ss_dssp             TSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHH--HHHSTT
T ss_pred             cccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--eEEEEeccHHhcCCcccccchHHHHHHHHHHHH--HHHHHh
Confidence            6667778999999999999999999999999764  899999999988876553      456677777  666553

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.69  E-value=1e-17  Score=112.23  Aligned_cols=131  Identities=8%  Similarity=-0.060  Sum_probs=101.9

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc--CCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF--GKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id~l---ag~~~~~~~   76 (147)
                      ++.|+++|++|++++++....          . .......+|.++.++.+.+...+.+.+  +++|++   ||......+
T Consensus        19 a~~l~~~G~~V~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~   87 (236)
T d1dhra_          19 VQAFRARNWWVASIDVVENEE----------A-SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNA   87 (236)
T ss_dssp             HHHHHTTTCEEEEEESSCCTT----------S-SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCT
T ss_pred             HHHHHHCCCEEEEEeCCcccc----------c-cccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCcccccccc
Confidence            567788888888888765321          1 134566788888888988888887765  469998   775544456


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhccC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRSI  147 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e~  147 (147)
                      +.+.+.++|++.+++|+.+++++++.++|+|++.  |+|||+||.++..+.+..      +++...|++  +|+.|+
T Consensus        88 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~--~la~El  160 (236)
T d1dhra_          88 KSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--GLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQ--SLAGKN  160 (236)
T ss_dssp             TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHH--HHTSTT
T ss_pred             hhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc--cceeEEccHHHcCCccCCcccHHHHHHHHHHHH--HHHHHh
Confidence            6677889999999999999999999999999764  899999999988776544      467777777  777764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=4.7e-15  Score=100.13  Aligned_cols=139  Identities=14%  Similarity=0.006  Sum_probs=106.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc----c
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN----W   74 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~----~   74 (147)
                      ++.|+++|++|++++|+....+.. +++....+ +...+.+|+++..++...+.++.+.++++|++   ++....    .
T Consensus        24 A~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~  101 (258)
T d1qsga_          24 AQAMHREGAELAFTYQNDKLKGRV-EEFAAQLG-SDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDG  101 (258)
T ss_dssp             HHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSS
T ss_pred             HHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcC-CcceeecccchHHHHHHHHHHhhhcccccceEEEeecccccccccc
Confidence            567899999999999996554444 44444333 47788899999999999999999999999998   443311    1


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS  146 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e  146 (147)
                      ........+.|...+++|+.+++.+++.+.|.|.+.  +.|+++||..+..+.+..      +++...|+.  ++++|
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Ii~iss~~~~~~~~~~~~Y~~sKaal~~ltr--~lA~e  175 (258)
T d1qsga_         102 DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--SALLTLSYLGAERAIPNYNVMGLAKASLEANVR--YMANA  175 (258)
T ss_dssp             CHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHH--HHHHH
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEecchhhccCCCCcHHHHHHHHHHHHHHH--HHHHH
Confidence            233456778899999999999999999999998654  679999998887776543      345666666  55554

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.53  E-value=5.8e-15  Score=98.58  Aligned_cols=130  Identities=14%  Similarity=0.017  Sum_probs=100.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--ecCC---Ccchh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLP---DNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--ag~~---~~~~~   76 (147)
                      ++.|+++|++|++++|+.+.             .+.....+|+++......+...........+.+  ++..   .....
T Consensus        18 A~~la~~Ga~V~i~~~~~~~-------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (241)
T d1uaya_          18 ALALKARGYRVVVLDLRREG-------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGK   84 (241)
T ss_dssp             HHHHHHHTCEEEEEESSCCS-------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCS
T ss_pred             HHHHHHCCCEEEEEECCccc-------------ccceEeeccccchhhhHHHHHhhhccccccchhhhhhcccccccccc
Confidence            67889999999999998642             247788999999999999988887776554444  3321   12344


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHh------hccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhh
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPL------LQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCR  144 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~  144 (147)
                      ....+.+.|++.+++|+.+++.+++.+++.      |.++++|+|||+||..+..+.+..      ++++..|++  +|+
T Consensus        85 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~--~lA  162 (241)
T d1uaya_          85 EGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTL--PAA  162 (241)
T ss_dssp             SSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHH--HHH
T ss_pred             ccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHHHHHHHH--HHH
Confidence            556788999999999999999999999998      445567999999999987765543      456777777  666


Q ss_pred             cc
Q 040927          145 RS  146 (147)
Q Consensus       145 ~e  146 (147)
                      +|
T Consensus       163 ~e  164 (241)
T d1uaya_         163 RE  164 (241)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.49  E-value=4e-14  Score=97.20  Aligned_cols=123  Identities=12%  Similarity=0.020  Sum_probs=87.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcC---------C--CceEEEEec--------------------CCCHHHH
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG---------C--DNVIFHLLD--------------------VTDPASV   50 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~---------~--~~~~~~~~D--------------------~~~~~~~   50 (147)
                      ++.|+++|++|++++|+...............         .  ..-....+|                    .++..++
T Consensus        27 A~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~  106 (297)
T d1d7oa_          27 AKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTV  106 (297)
T ss_dssp             HHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSCHHHHTSHHHHHCCCCSH
T ss_pred             HHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccchhhhhhhhhhhhccHHHH
Confidence            57899999999999997654333222221110         0  001233333                    3566778


Q ss_pred             HHHHHHHHhhcCCccEE---ecCCC-cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927           51 DSLVHFVSSQFGKLDIL---GGLPD-NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK  126 (147)
Q Consensus        51 ~~~~~~~~~~~g~id~l---ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  126 (147)
                      +++++.+.++||++|++   +|... ...++.+.+.++|++.+++|+.+++.+++.++|.|.++  |.++++++..+...
T Consensus       107 ~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~  184 (297)
T d1d7oa_         107 QEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPG--GASISLTYIASERI  184 (297)
T ss_dssp             HHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSC
T ss_pred             HHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcC--Ccceeeeehhhccc
Confidence            89999999999999999   66542 24678899999999999999999999999999998876  55666666554433

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.46  E-value=4.3e-14  Score=96.08  Aligned_cols=122  Identities=16%  Similarity=0.100  Sum_probs=87.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc---h
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW---Y   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~---~   75 (147)
                      |+.|+++|++|++++|++ ++++..+++.+.+. ...++.+|+++++++.++++++.+.+|++|++   +|.....   .
T Consensus        24 A~~la~~Ga~V~i~~r~~-~~~~~~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~  101 (274)
T d2pd4a1          24 AQSCFNQGATLAFTYLNE-SLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEG  101 (274)
T ss_dssp             HHHHHTTTCEEEEEESST-TTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSS
T ss_pred             HHHHHHCCCEEEEEeCCH-HHHHHHHHHHhhCC-ceeEeeecccchhhHHHHHHHHHHHcCCCCeEEeeccccccccccc
Confidence            678999999999999995 45556677776665 57889999999999999999999999999999   6654332   2


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                      .+.......+...+.++..+...+.+...+.+...  +.|+++||.+...+.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~s~~~~~~~~  151 (274)
T d2pd4a1         102 SLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG--ASVLTLSYLGSTKYM  151 (274)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSBC
T ss_pred             ccccccchhhhhhhccccccccccccccccccccC--cceeeeccccccccc
Confidence            34445556666666666666666666666654322  446666665544443

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.43  E-value=3.7e-13  Score=91.08  Aligned_cols=137  Identities=18%  Similarity=0.120  Sum_probs=97.5

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc---CCccEE---ecCCC---
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF---GKLDIL---GGLPD---   72 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~---g~id~l---ag~~~---   72 (147)
                      ++.|+++|++|++++|+.+++.+   ++.+..+.+...+.||++++++++.+++.+.+.+   +.+|++   +|...   
T Consensus        25 A~~la~~Ga~Vil~~~~~~~~~~---~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~  101 (268)
T d2h7ma1          25 ARVAQEQGAQLVLTGFDRLRLIQ---RITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTG  101 (268)
T ss_dssp             HHHHHHTTCEEEEEECSCHHHHH---HHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGG
T ss_pred             HHHHHHcCCEEEEEeCChHHHHH---HHHHHcCCceeeEeeecccccccccccchhhhccccCCCcceeeecccccCccc
Confidence            57799999999999999865433   3333222357889999999999999999998765   567887   55432   


Q ss_pred             -cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhc
Q 040927           73 -NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRR  145 (147)
Q Consensus        73 -~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~  145 (147)
                       ...++.+.+.++|...+++|+.+++...+...+.+..   +.+++++|.....+.|..      +++...++.  ++++
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~p~~~~y~~sK~a~~~ltr--~lA~  176 (268)
T d2h7ma1         102 MGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSRAMPAYNWMTVAKSALESVNR--FVAR  176 (268)
T ss_dssp             STTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSSCCTTTHHHHHHHHHHHHHHH--HHHH
T ss_pred             cccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---ccccccccccccccCcccchhhccccchhhccc--cchh
Confidence             2245678889999999999999999999999887643   335555555555554433      345555555  4444


Q ss_pred             c
Q 040927          146 S  146 (147)
Q Consensus       146 e  146 (147)
                      |
T Consensus       177 e  177 (268)
T d2h7ma1         177 E  177 (268)
T ss_dssp             H
T ss_pred             h
Confidence            3

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.41  E-value=9.1e-13  Score=88.92  Aligned_cols=143  Identities=11%  Similarity=0.014  Sum_probs=99.9

Q ss_pred             ccccccCCcEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCC----HHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            2 KRSNQVHYSMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTD----PASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~----~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      ++.|+++|++|++++|+.+ ..+++.+++......+.....+|..+    .+.+.++++.+.+++|++|++   ||...+
T Consensus        18 a~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~   97 (266)
T d1mxha_          18 AVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYP   97 (266)
T ss_dssp             HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHhCCCCEEEECCccCCC
Confidence            5789999999999999855 46778888877655456676665544    566778888888999999999   675422


Q ss_pred             c----------hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-----CCCeEEEEcCCCCCCcCCCc------hh
Q 040927           74 W----------YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-----DSPRIVNASSSMGKLKNITN------EW  132 (147)
Q Consensus        74 ~----------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~iv~isS~~~~~~~~~~------~~  132 (147)
                      .          ....+.....+...+..|+.+++.+.+...+.+...     ..+.+++++|..+..+.+..      ++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKa  177 (266)
T d1mxha_          98 TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKH  177 (266)
T ss_dssp             CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred             CcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccccccCcchhhhhhhHH
Confidence            1          112234456788889999999999999998887543     34678888888876665543      45


Q ss_pred             hhccccchhhhhcc
Q 040927          133 AKGVLSDWMRCRRS  146 (147)
Q Consensus       133 ~~~~~~~~~al~~e  146 (147)
                      ++..++.  ++++|
T Consensus       178 al~~lt~--~lA~e  189 (266)
T d1mxha_         178 ALGGLTR--AAALE  189 (266)
T ss_dssp             HHHHHHH--HHHHH
T ss_pred             HHhhhHH--HHHHH
Confidence            5666665  45444

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.70  E-value=3.8e-10  Score=72.57  Aligned_cols=92  Identities=10%  Similarity=-0.102  Sum_probs=71.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|+++|++|++++|+.++++++.+++....  ++....+|++|.+++++++       +.+|++   +|...     .
T Consensus        40 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~-------~~iDilin~Ag~g~-----~  105 (191)
T d1luaa1          40 AALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVNVTAAETADDASRAEAV-------KGAHFVFTAGAIGL-----E  105 (191)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--TCCCEEEECCSHHHHHHHT-------TTCSEEEECCCTTC-----C
T ss_pred             HHHHHhhccchhhcccchHHHHHHHHHHHhcc--chhhhhhhcccHHHHHHHh-------cCcCeeeecCcccc-----c
Confidence            57889999999999999999999999887654  3567889999998876653       678999   55431     2


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhh
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLL  107 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  107 (147)
                      ..+.++|+..+++|+.+.++....+.+.+
T Consensus       106 ~~~~e~~~~~~~~nv~~~~~~~~~~~~~~  134 (191)
T d1luaa1         106 LLPQAAWQNESSIEIVADYNAQPPLGIGG  134 (191)
T ss_dssp             CBCHHHHHTCTTCCEEEECCCSSSCSBTT
T ss_pred             cCCHHHHHhhhcceeehhHhhHHHHHHHh
Confidence            46789999999999988777655544433

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=98.58  E-value=4.6e-08  Score=68.15  Aligned_cols=110  Identities=16%  Similarity=0.129  Sum_probs=69.5

Q ss_pred             CccccccCCcEEEEeecChh-----hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC
Q 040927            1 MKRSNQVHYSMGEATTKDEK-----RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD   72 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~   72 (147)
                      |+++|.+.|++|+.++|...     .++.+..+..... .++.++.+|++|.+++.+.+...     .+|++   |+...
T Consensus        17 lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~v~h~aa~~~   90 (357)
T d1db3a_          17 LAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCN-PKFHLHYGDLSDTSNLTRILREV-----QPDEVYNLGAMSH   90 (357)
T ss_dssp             HHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHH-----CCSEEEECCCCCT
T ss_pred             HHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcC-CCeEEEEeecCCHHHHHHHHhcc-----CCCEEEEeecccc
Confidence            35678889999999998532     2333333222222 36899999999999999888764     57777   55442


Q ss_pred             cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      ...     +.++....+++|+.|+.++++++...-.+ +..++|++||..
T Consensus        91 ~~~-----~~~~~~~~~~~Nv~gt~nllea~~~~~~~-~~~r~i~~SS~~  134 (357)
T d1db3a_          91 VAV-----SFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSE  134 (357)
T ss_dssp             TTT-----TTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGG
T ss_pred             cch-----hhhCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEEchh
Confidence            212     22334567899999999999998654222 235799999854

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=98.50  E-value=1.5e-07  Score=64.96  Aligned_cols=109  Identities=13%  Similarity=0.055  Sum_probs=71.8

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|++++|..................++.++.+|++|.+.+.++++.     ..+|++   |+.... .   
T Consensus        17 ~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~-----~~~d~ViHlAa~~~~-~---   87 (338)
T d1udca_          17 CVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD-----HAIDTVIHFAGLKAV-G---   87 (338)
T ss_dssp             HHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH-----TTCSEEEECCSCCCH-H---
T ss_pred             HHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhc-----cCCCEEEECCCccch-h---
Confidence            5678889999999876321111112222221122588999999999998887765     368888   554321 1   


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                       .+.++....+++|+.|+..+++++...    +-.++|++||.+..
T Consensus        88 -~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~Ss~~vy  128 (338)
T d1udca_          88 -ESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVY  128 (338)
T ss_dssp             -HHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGG
T ss_pred             -hHHhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecCcceEE
Confidence             122344578899999999999988765    23568888886643

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.33  E-value=2.6e-07  Score=61.26  Aligned_cols=94  Identities=17%  Similarity=0.254  Sum_probs=68.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc-CCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l---ag~~~~~~~~   77 (147)
                      ++.|+++|++|++++|+.++                  ..+|+.+.+..+....+...+. +.+|++   ||....    
T Consensus        18 A~~la~~Ga~V~~~~~~~~~------------------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~----   75 (257)
T d1fjha_          18 RKVLEAAGHQIVGIDIRDAE------------------VIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQ----   75 (257)
T ss_dssp             HHHHHHTTCEEEEEESSSSS------------------EECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTT----
T ss_pred             HHHHHHCCCEEEEEECChHH------------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCc----
Confidence            56677788888888776431                  2468888888888776666554 579998   665422    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS  121 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  121 (147)
                          .+.|.....+|..++..+.+...+.+.+...+.+.++++.
T Consensus        76 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (257)
T d1fjha_          76 ----TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV  115 (257)
T ss_dssp             ----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeec
Confidence                1346777889999999999999998887766666666653

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.19  E-value=1.1e-05  Score=56.46  Aligned_cols=112  Identities=9%  Similarity=-0.083  Sum_probs=72.3

Q ss_pred             CccccccCCcEEEEeecC----------------hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCc
Q 040927            1 MKRSNQVHYSMGEATTKD----------------EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKL   64 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   64 (147)
                      |+++|.+.|++|++++.-                .....+.........+.++.++.+|++|.+.+++++...     .+
T Consensus        17 lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~   91 (393)
T d1i24a_          17 TALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESFKSF-----EP   91 (393)
T ss_dssp             HHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHHHHH-----CC
T ss_pred             HHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHHHHHHHhh-----cc
Confidence            356788899999887511                111122223333322236899999999999999888764     68


Q ss_pred             cEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           65 DIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        65 d~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      |++   |+...  .+....+.+.....+.+|+.|+.+++..+...-.   ...+++.||..
T Consensus        92 d~ViHlAa~~~--~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~---~~~~i~~ss~~  147 (393)
T d1i24a_          92 DSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE---ECHLVKLGTMG  147 (393)
T ss_dssp             SEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEECCGG
T ss_pred             hheeccccccc--cccccccccccccccccccccccHHHHHHHHhcc---ccceeeccccc
Confidence            888   55442  2333455566778899999999999998765421   23455555543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=1.5e-06  Score=59.73  Aligned_cols=110  Identities=17%  Similarity=0.110  Sum_probs=68.1

Q ss_pred             ccccccCCcEEEEeecChh-----hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            2 KRSNQVHYSMGEATTKDEK-----RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      ++.|.++|++|+.++|...     .++.+..........++.++.+|++|.+.+.+++...     .++++   ++.. .
T Consensus        18 ~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~v~~~~a~~-~   91 (347)
T d1t2aa_          18 AEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-----KPTEIYNLGAQS-H   91 (347)
T ss_dssp             HHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCC-C
T ss_pred             HHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc-----ccceeeeeeecc-c
Confidence            5677889999999998532     2222222222222235889999999999998887664     33344   3332 2


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      ..    ...+.....+++|+.|+.+++.++...-... ..++|++||.+
T Consensus        92 ~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~-~~~~i~~SS~~  135 (347)
T d1t2aa_          92 VK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN-SVKFYQASTSE  135 (347)
T ss_dssp             HH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT-TCEEEEEEEGG
T ss_pred             cc----hhhccchhhhhhHHHHHHHHHHHHHHcCCCC-CcEEEEecchh
Confidence            11    1233445668999999999998887653322 25799999855

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.16  E-value=6e-06  Score=56.20  Aligned_cols=105  Identities=15%  Similarity=-0.020  Sum_probs=68.3

Q ss_pred             ccccccCCcEEEEeecC--hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927            2 KRSNQVHYSMGEATTKD--EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK   76 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~--~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~   76 (147)
                      +++|.++|++|+.+++-  ..... -...+...+  ++.++.+|++|.+++.++++..     .+|++   |+.... . 
T Consensus        17 v~~Ll~~g~~V~~id~~~~~~~~~-~~~~~~~~~--~~~~i~~Di~~~~~l~~~~~~~-----~~d~Vih~aa~~~~-~-   86 (338)
T d1orra_          17 ASFALSQGIDLIVFDNLSRKGATD-NLHWLSSLG--NFEFVHGDIRNKNDVTRLITKY-----MPDSCFHLAGQVAM-T-   86 (338)
T ss_dssp             HHHHHHTTCEEEEEECCCSTTHHH-HHHHHHTTC--CCEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH-H-
T ss_pred             HHHHHHCcCEEEEEECCCcccchh-HHHHhhccC--CcEEEEcccCCHHHHHHHHHhc-----CCceEEeecccccc-c-
Confidence            56788899999988642  22222 223333332  5899999999999998887664     57888   444322 1 


Q ss_pred             hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                         ...++....+++|+.|+.++++++...    +..+.++.||...
T Consensus        87 ---~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~  126 (338)
T d1orra_          87 ---TSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNK  126 (338)
T ss_dssp             ---HHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGG
T ss_pred             ---ccccChHHHHHHHHHHHHHHHHhhhcc----ccccccccccccc
Confidence               122345678899999999999987654    2234555555443

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.08  E-value=2.2e-06  Score=59.11  Aligned_cols=108  Identities=13%  Similarity=0.071  Sum_probs=69.2

Q ss_pred             ccccccCCcEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++|++|+++++... ...... ........++.++.+|++|.++++.++..     ..+|++   |+.... .. 
T Consensus        18 v~~Ll~~g~~V~~~d~~~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~-----~~~d~VihlAa~~~~-~~-   89 (347)
T d1z45a2          18 VVELIENGYDCVVADNLSNSTYDSVA-RLEVLTKHHIPFYEVDLCDRKGLEKVFKE-----YKIDSVIHFAGLKAV-GE-   89 (347)
T ss_dssp             HHHHHHTTCEEEEEECCSSCCTHHHH-HHHHHHTSCCCEEECCTTCHHHHHHHHHH-----SCCCEEEECCSCCCH-HH-
T ss_pred             HHHHHHCcCeEEEEECCCCcchhHHH-hHHhhcccCCeEEEeecCCHHHHHHHHhc-----cCCCEEEEccccccc-cc-
Confidence            4678889999999875321 111111 11111112588899999999999887754     268888   554422 11 


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                         ..+.-.....+|+.++.++.+++...    +-.++|++||....
T Consensus        90 ---~~~~~~~~~~~N~~~t~~ll~~~~~~----~i~~~i~~SS~~vy  129 (347)
T d1z45a2          90 ---STQIPLRYYHNNILGTVVLLELMQQY----NVSKFVFSSSATVY  129 (347)
T ss_dssp             ---HHHSHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGG
T ss_pred             ---cccCcccccccchhhhHHHHHHHHhc----ccceEEeecceeee
Confidence               12233567789999999999998654    23469999986543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=98.02  E-value=7.7e-06  Score=56.24  Aligned_cols=93  Identities=14%  Similarity=0.086  Sum_probs=64.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      ++.|.++|++|+.++|+........+.....  ..+.++.+|++|++.+.+++...     .+|++   ++....  .  
T Consensus        25 v~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~--~~i~~~~~Dl~d~~~l~~~~~~~-----~~~~v~~~aa~~~~--~--   93 (356)
T d1rkxa_          25 SLWLQTMGATVKGYSLTAPTVPSLFETARVA--DGMQSEIGDIRDQNKLLESIREF-----QPEIVFHMAAQPLV--R--   93 (356)
T ss_dssp             HHHHHHTTCEEEEEESSCSSSSCHHHHTTTT--TTSEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH--H--
T ss_pred             HHHHHHCCCEEEEEECCCCccHHHHhhhhcc--cCCeEEEeeccChHhhhhhhhhc-----hhhhhhhhhccccc--c--
Confidence            5678889999999999765444443333222  25889999999999888776653     56666   443322  1  


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHh
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPL  106 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~  106 (147)
                       .+.+..+..+.+|+.++..++.++...
T Consensus        94 -~~~~~~~~~~~~Nv~g~~n~l~~~~~~  120 (356)
T d1rkxa_          94 -LSYSEPVETYSTNVMGTVYLLEAIRHV  120 (356)
T ss_dssp             -HHHHCHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             -ccccCCccccccccccchhhhhhhhcc
Confidence             223445678899999999999887653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=1.3e-05  Score=55.07  Aligned_cols=108  Identities=12%  Similarity=0.066  Sum_probs=67.7

Q ss_pred             ccccccCCcEEEEeec------ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC
Q 040927            2 KRSNQVHYSMGEATTK------DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD   72 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r------~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~   72 (147)
                      ++.|.+.|++|+.+++      +........+.+......++.++.+|++|.+.+.+++..     ..++++   |+...
T Consensus        19 v~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~-----~~~~~i~h~Aa~~~   93 (346)
T d1ek6a_          19 VLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK-----YSFMAVIHFAGLKA   93 (346)
T ss_dssp             HHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH-----CCEEEEEECCSCCC
T ss_pred             HHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc-----cccccccccccccC
Confidence            5678889999998863      111111222222222223689999999999998887654     345554   55542


Q ss_pred             cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                      . .    .+.++-...+++|+.+...+..++...    +-..+++.||...
T Consensus        94 ~-~----~~~~~p~~~~~~Nv~gt~~l~~~~~~~----~v~~~i~~ss~~~  135 (346)
T d1ek6a_          94 V-G----ESVQKPLDYYRVNLTGTIQLLEIMKAH----GVKNLVFSSSATV  135 (346)
T ss_dssp             H-H----HHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEEEGGG
T ss_pred             c-H----hhHhCHHHHHHhhhcccccccchhhhc----Cccccccccccee
Confidence            2 1    122334567899999999988886543    3346888887553

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=97.83  E-value=3e-06  Score=58.89  Aligned_cols=109  Identities=12%  Similarity=0.061  Sum_probs=68.6

Q ss_pred             ccccccCCcEEEEeecCh---hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927            2 KRSNQVHYSMGEATTKDE---KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY   75 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~   75 (147)
                      +++|.+.|+.+++..++.   ...+. .+.+.  ...++.++.+|++|.+.+.++++..     .+|++   |+....  
T Consensus        17 ~~~L~~~g~~vv~~~d~~~~~~~~~~-~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~VihlAa~~~~--   86 (361)
T d1kewa_          17 VRHIIKNTQDTVVNIDKLTYAGNLES-LSDIS--ESNRYNFEHADICDSAEITRIFEQY-----QPDAVMHLAAESHV--   86 (361)
T ss_dssp             HHHHHHHCSCEEEEEECCCTTCCGGG-GTTTT--TCTTEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH--
T ss_pred             HHHHHHCCCCEEEEEeCCCccccHHH-HHhhh--hcCCcEEEEccCCCHHHHHHHHHhC-----CCCEEEECccccch--
Confidence            456777888754443221   11111 11111  1235889999999999998887653     67887   554322  


Q ss_pred             hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-----CCCeEEEEcCCCC
Q 040927           76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-----DSPRIVNASSSMG  123 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~iv~isS~~~  123 (147)
                      +   .+.++-...+++|+.|...+.+.+.......     +..++|++||.+.
T Consensus        87 ~---~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~v  136 (361)
T d1kewa_          87 D---RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEV  136 (361)
T ss_dssp             H---HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGG
T ss_pred             h---hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEecccee
Confidence            1   1223345678999999999999988764332     2357999999663

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.68  E-value=2.6e-05  Score=53.12  Aligned_cols=110  Identities=16%  Similarity=0.076  Sum_probs=67.2

Q ss_pred             ccccccCCcEEEEeecCh-----hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927            2 KRSNQVHYSMGEATTKDE-----KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN   73 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~   73 (147)
                      ++.|.++|++|+.++|..     .....+...........+.++.+|+++.+++.+.++..     .+|++   |+....
T Consensus        18 v~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~-----~~D~Vih~Aa~~~~   92 (339)
T d1n7ha_          18 TEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-----KPDEVYNLAAQSHV   92 (339)
T ss_dssp             HHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH
T ss_pred             HHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh-----ccchhhhccccccc
Confidence            567889999999999843     22222222222222225788999999999988887653     78887   554422


Q ss_pred             chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCC
Q 040927           74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSS  121 (147)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~  121 (147)
                       .    ...+.-...+++|..+...+..++....... ....+++.||.
T Consensus        93 -~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~  136 (339)
T d1n7ha_          93 -A----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSS  136 (339)
T ss_dssp             -H----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG
T ss_pred             -c----ccccCccccccccccccchhhhhhhhcccccccceeeeecccc
Confidence             1    1234446678899999998888876544332 22345555553

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.57  E-value=5e-05  Score=51.31  Aligned_cols=105  Identities=12%  Similarity=0.019  Sum_probs=64.5

Q ss_pred             ccccccCCcEEEEeecChhhH-HHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRG-LAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~-~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++|++|+.++|..... ..-.+.+...  .++.++.+|++|.+.+.+.+...     ..+++   ++.... .. 
T Consensus        17 ~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~~~~~a~~~~~-~~-   87 (321)
T d1rpna_          17 AKLLLEKGYRVHGLVARRSSDTRWRLRELGIE--GDIQYEDGDMADACSVQRAVIKA-----QPQEVYNLAAQSFV-GA-   87 (321)
T ss_dssp             HHHHHHTTCEEEEEECCCSSCCCHHHHHTTCG--GGEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH-HH-
T ss_pred             HHHHHHCcCEEEEEECCCCcccHHHHHHhccc--CCcEEEEccccChHHhhhhhccc-----cccccccccccccc-cc-
Confidence            456788999999999864221 1112222222  25899999999999888777664     33344   333311 11 


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS  121 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  121 (147)
                         ..+.....+.+|+.|+.+++..+...-.   ...+++.||.
T Consensus        88 ---~~~~~~~~~~~n~~g~~~~l~~~~~~~~---~~~~i~~Ss~  125 (321)
T d1rpna_          88 ---SWNQPVTTGVVDGLGVTHLLEAIRQFSP---ETRFYQASTS  125 (321)
T ss_dssp             ---HTTSHHHHHHHHTHHHHHHHHHHHHHCT---TSEEEEEEEG
T ss_pred             ---cccchHHHHhhhhhchHHHHHHHHHhCC---Ccccccccch
Confidence               1123367788999999999888765421   2346666653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=7e-05  Score=47.62  Aligned_cols=92  Identities=15%  Similarity=0.093  Sum_probs=57.3

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML   78 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~   78 (147)
                      +++|.++|++|.++.|+.+++..       .....+.++.+|++|++++.++++       ..|++   +|......+  
T Consensus        20 ~~~Ll~~g~~V~~~~R~~~~~~~-------~~~~~~~~~~gD~~d~~~l~~al~-------~~d~vi~~~g~~~~~~~--   83 (205)
T d1hdoa_          20 LAQAVQAGYEVTVLVRDSSRLPS-------EGPRPAHVVVGDVLQAADVDKTVA-------GQDAVIVLLGTRNDLSP--   83 (205)
T ss_dssp             HHHHHHTTCEEEEEESCGGGSCS-------SSCCCSEEEESCTTSHHHHHHHHT-------TCSEEEECCCCTTCCSC--
T ss_pred             HHHHHHCcCEEEEEEcChhhccc-------ccccccccccccccchhhHHHHhc-------CCCEEEEEeccCCchhh--
Confidence            45678899999999999876332       122358899999999988766643       46777   454322111  


Q ss_pred             cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                       .         +++..+..+++    +.+++.+-.++|++||...
T Consensus        84 -~---------~~~~~~~~~l~----~aa~~~~v~r~i~~ss~~~  114 (205)
T d1hdoa_          84 -T---------TVMSEGARNIV----AAMKAHGVDKVVACTSAFL  114 (205)
T ss_dssp             -C---------CHHHHHHHHHH----HHHHHHTCCEEEEECCGGG
T ss_pred             -h---------hhhHHHHHHHH----HHHHhcCCCeEEEEeeeec
Confidence             1         12223333333    3445555578999988554

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=97.41  E-value=0.00026  Score=48.38  Aligned_cols=104  Identities=11%  Similarity=0.037  Sum_probs=66.6

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++|++|+.+.|+......+......... .....+..|++|.+++.+++       ...|.+   ++....    
T Consensus        28 ~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~~~v~~~a~~~~~----   96 (342)
T d1y1pa1          28 VEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI-------KGAAGVAHIASVVSF----   96 (342)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT-------TTCSEEEECCCCCSC----
T ss_pred             HHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc-------ccchhhhhhcccccc----
Confidence            467888899999999988766655544333222 23445778999988766544       245666   332211    


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                       ..+.   ...+.+|+.|+.++++.+...   ..-.++|++||..+
T Consensus        97 -~~~~---~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~  135 (342)
T d1y1pa1          97 -SNKY---DEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVS  135 (342)
T ss_dssp             -CSCH---HHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGG
T ss_pred             -cccc---cccccchhhhHHHHHHhhhcc---ccccccccccccee
Confidence             1222   345678999998888887553   12367999998654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.22  E-value=0.00043  Score=47.09  Aligned_cols=106  Identities=12%  Similarity=-0.033  Sum_probs=64.7

Q ss_pred             ccccccCCcEEEEeecCh----hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927            2 KRSNQVHYSMGEATTKDE----KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW   74 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~----~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~   74 (147)
                      ++.|.+.|++|+.++|..    ................++.++.+|..|........       ...+.+   +..... 
T Consensus        33 v~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-------~~~~~v~~~~a~~~~-  104 (341)
T d1sb8a_          33 LETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC-------AGVDYVLHQAALGSV-  104 (341)
T ss_dssp             HHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH-------TTCSEEEECCSCCCH-
T ss_pred             HHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc-------ccccccccccccccc-
Confidence            567888999999987622    22222211111111125888999999877554331       233333   322211 


Q ss_pred             hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                          ..+.++....+++|+.|+..+...+...    +..++|++||...
T Consensus       105 ----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~~~~i~~SS~~v  145 (341)
T d1sb8a_         105 ----PRSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSST  145 (341)
T ss_dssp             ----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGG
T ss_pred             ----cccccCccchhheeehhHHHHHHHHHhc----CCceEEEccccee
Confidence                1234566778999999999999988654    3357999998664

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=97.06  E-value=0.005  Score=40.99  Aligned_cols=100  Identities=14%  Similarity=0.058  Sum_probs=67.2

Q ss_pred             EEEEeecChhhHHHHHHHHHhcCCCceEEE----EecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHH
Q 040927           11 MGEATTKDEKRGLAAVEKLKNSGCDNVIFH----LLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYE   83 (147)
Q Consensus        11 ~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~----~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~   83 (147)
                      +|++++.+..-...+.+.|.+.+. .+...    .+|+.|.+.+.++++.     ..+|.+   ++.... ..   ....
T Consensus         4 kIlITG~tGfiG~~l~~~L~~~g~-~vi~~~~~~~~~~~~~~~~~~~~~~-----~~~d~v~~~a~~~~~-~~---~~~~   73 (315)
T d1e6ua_           4 RVFIAGHRGMVGSAIRRQLEQRGD-VELVLRTRDELNLLDSRAVHDFFAS-----ERIDQVYLAAAKVGG-IV---ANNT   73 (315)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTCTT-EEEECCCTTTCCTTCHHHHHHHHHH-----HCCSEEEECCCCCCC-HH---HHHH
T ss_pred             EEEEEcCCcHHHHHHHHHHHHCcC-EEEEecCchhccccCHHHHHHHHhh-----cCCCEEEEcchhccc-cc---cchh
Confidence            688888888888888888887764 22222    3688888888777654     256777   433322 11   1233


Q ss_pred             HHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927           84 LAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK  124 (147)
Q Consensus        84 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  124 (147)
                      .....+++|+.++.++++++...    +-.++|++||.+..
T Consensus        74 ~~~~~~~~Nv~gt~~ll~~a~~~----~v~~~i~~SS~~vy  110 (315)
T d1e6ua_          74 YPADFIYQNMMIESNIIHAAHQN----DVNKLLFLGSSCIY  110 (315)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEECCGGGS
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEECCceEc
Confidence            44556888999999998887553    33579999997754

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.90  E-value=0.0085  Score=41.11  Aligned_cols=75  Identities=16%  Similarity=0.148  Sum_probs=51.0

Q ss_pred             ceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC
Q 040927           36 NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS  112 (147)
Q Consensus        36 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  112 (147)
                      +..++.+|++|.+.++++++..    .++|++   |+.... ..    ..+.....+++|+.+...++.++...    +.
T Consensus        70 ~~~~~~~Di~d~~~l~~~~~~~----~~~d~ViH~Aa~~~~-~~----~~~~~~~~~~~N~~~t~~~l~~~~~~----~~  136 (383)
T d1gy8a_          70 YAALEVGDVRNEDFLNGVFTRH----GPIDAVVHMCAFLAV-GE----SVRDPLKYYDNNVVGILRLLQAMLLH----KC  136 (383)
T ss_dssp             CCEEEESCTTCHHHHHHHHHHS----CCCCEEEECCCCCCH-HH----HHHCHHHHHHHHHHHHHHHHHHHHHT----TC
T ss_pred             ceEEEECcccCHHHhhhhhhcc----ceeehhhcccccccc-cc----cccccccccccccccccccchhhhcc----CC
Confidence            4778899999999888777543    578888   554422 11    22334567889999999998887654    33


Q ss_pred             CeEEEEcCCCC
Q 040927          113 PRIVNASSSMG  123 (147)
Q Consensus       113 ~~iv~isS~~~  123 (147)
                      ..+++++|...
T Consensus       137 ~~~~~~~s~~~  147 (383)
T d1gy8a_         137 DKIIFSSSAAI  147 (383)
T ss_dssp             CEEEEEEEGGG
T ss_pred             ccccccccccc
Confidence            45666666543

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=96.69  E-value=0.00092  Score=45.33  Aligned_cols=99  Identities=11%  Similarity=-0.042  Sum_probs=60.8

Q ss_pred             ccccccCC-cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927            2 KRSNQVHY-SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM   77 (147)
Q Consensus         2 ~~~l~~~G-~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~   77 (147)
                      ++.|.++| ++|+.+++......+.    ..  ..++.++.+|+++.+++.+..   .+   .+|++   |+......  
T Consensus        17 ~~~Ll~~g~~~V~~ld~~~~~~~~~----~~--~~~~~~i~~Di~~~~~~~~~~---~~---~~d~Vih~a~~~~~~~--   82 (342)
T d2blla1          17 TERLLREDHYEVYGLDIGSDAISRF----LN--HPHFHFVEGDISIHSEWIEYH---VK---KCDVVLPLVAIATPIE--   82 (342)
T ss_dssp             HHHHHHSTTCEEEEEESCCGGGGGG----TT--CTTEEEEECCTTTCSHHHHHH---HH---HCSEEEECBCCCCHHH--
T ss_pred             HHHHHHCCCCEEEEEeCCCcchhhh----cc--CCCeEEEECccCChHHHHHHH---Hh---CCCccccccccccccc--
Confidence            45667777 5788877754432221    11  136899999999887765432   22   36777   55442211  


Q ss_pred             hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                         ..++-...+++|+.|...+++.+...    + ..++++||..
T Consensus        83 ---~~~~~~~~~~~nv~gt~~ll~~~~~~----~-~~~~~~ss~~  119 (342)
T d2blla1          83 ---YTRNPLRVFELDFEENLRIIRYCVKY----R-KRIIFPSTSE  119 (342)
T ss_dssp             ---HHHSHHHHHHHHTHHHHHHHHHHHHT----T-CEEEEECCGG
T ss_pred             ---cccCCccccccccccccccccccccc----c-cccccccccc
Confidence               22333567899999999999997553    1 3456666644

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=96.54  E-value=0.00044  Score=47.18  Aligned_cols=70  Identities=24%  Similarity=0.224  Sum_probs=45.4

Q ss_pred             ceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC
Q 040927           36 NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS  112 (147)
Q Consensus        36 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  112 (147)
                      ++.++.+|+.|.+.+..++.       ..|.+   |+.......     ..+....+++|+.|...++..+...-     
T Consensus        53 ~i~~~~~Di~d~~~~~~~~~-------~~~~v~~~a~~~~~~~~-----~~~~~~~~~~N~~g~~nll~~~~~~~-----  115 (346)
T d1oc2a_          53 RVELVVGDIADAELVDKLAA-------KADAIVHYAAESHNDNS-----LNDPSPFIHTNFIGTYTLLEAARKYD-----  115 (346)
T ss_dssp             SEEEEECCTTCHHHHHHHHT-------TCSEEEECCSCCCHHHH-----HHCCHHHHHHHTHHHHHHHHHHHHHT-----
T ss_pred             CeEEEEccCCCHHHHHHHHh-------hhhhhhhhhhcccccch-----hhCcccceeeehHhHHhhhhhhcccc-----
Confidence            58889999999888877642       22333   444322111     12335678999999999998876542     


Q ss_pred             CeEEEEcCCC
Q 040927          113 PRIVNASSSM  122 (147)
Q Consensus       113 ~~iv~isS~~  122 (147)
                      .++|++||..
T Consensus       116 ~k~i~~ss~~  125 (346)
T d1oc2a_         116 IRFHHVSTDE  125 (346)
T ss_dssp             CEEEEEEEGG
T ss_pred             ccccccccce
Confidence            3577777654

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=96.07  E-value=0.015  Score=37.94  Aligned_cols=96  Identities=17%  Similarity=0.092  Sum_probs=62.8

Q ss_pred             EEEEeecChhhHHHHHHHHHhcCCCceEE-------EEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcc
Q 040927           11 MGEATTKDEKRGLAAVEKLKNSGCDNVIF-------HLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQ   80 (147)
Q Consensus        11 ~v~l~~r~~~~~~~~~~~l~~~~~~~~~~-------~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~   80 (147)
                      +|++++.+.--+..+.+.|...+.  ...       +.+|++|.+.++++++..     .+|++   ||.... ... ..
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~--~v~~~~~~~~~~~Dl~~~~~~~~~i~~~-----~~D~Vih~Aa~~~~-~~~-~~   72 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN--LIALDVHSKEFCGDFSNPKGVAETVRKL-----RPDVIVNAAAHTAV-DKA-ES   72 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE--EEEECTTCSSSCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH-HHH-TT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC--EEEEECCCccccCcCCCHHHHHHHHHHc-----CCCEEEEecccccc-ccc-cc
Confidence            577888887777777777766542  211       236899999888877664     57888   665522 221 22


Q ss_pred             cHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927           81 TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG  123 (147)
Q Consensus        81 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  123 (147)
                      .   -...+++|+.++..+..++...     +..++++||...
T Consensus        73 ~---~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~~ss~~~  107 (298)
T d1n2sa_          73 E---PELAQLLNATSVEAIAKAANET-----GAWVVHYSTDYV  107 (298)
T ss_dssp             C---HHHHHHHHTHHHHHHHHHHTTT-----TCEEEEEEEGGG
T ss_pred             C---ccccccccccccccchhhhhcc-----cccccccccccc
Confidence            2   2467788999988888876432     356777777543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.78  E-value=0.0014  Score=40.52  Aligned_cols=33  Identities=6%  Similarity=-0.044  Sum_probs=28.9

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHHHHhcC
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG   33 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~   33 (147)
                      |++.|++.|++|++.+|++++++++.+++.+.+
T Consensus        16 lA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_          16 LALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             HHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            467899999999999999999999999887654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=95.59  E-value=0.08  Score=35.10  Aligned_cols=73  Identities=15%  Similarity=0.153  Sum_probs=48.2

Q ss_pred             ceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC
Q 040927           36 NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS  112 (147)
Q Consensus        36 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  112 (147)
                      ++.++.+|.++.......       ...+|.+   |+.... .    .........+++|+.++..+++.+...    +.
T Consensus        56 ~~~~~~~d~~~~~~~~~~-------~~~~d~vi~~a~~~~~-~----~~~~~~~~~~~~N~~gt~~ll~~~~~~----~~  119 (322)
T d1r6da_          56 RLRFVHGDIRDAGLLARE-------LRGVDAIVHFAAESHV-D----RSIAGASVFTETNVQGTQTLLQCAVDA----GV  119 (322)
T ss_dssp             TEEEEECCTTCHHHHHHH-------TTTCCEEEECCSCCCH-H----HHHHCCHHHHHHHTHHHHHHHHHHHHT----TC
T ss_pred             CeEEEEeccccchhhhcc-------ccccceEEeecccccc-c----ccccchHHHhhhhHHHHHHHHHHHHHc----CC
Confidence            477888999888755432       2355666   544322 1    223444567789999999999988653    33


Q ss_pred             CeEEEEcCCCCC
Q 040927          113 PRIVNASSSMGK  124 (147)
Q Consensus       113 ~~iv~isS~~~~  124 (147)
                      .++|++||....
T Consensus       120 ~~~I~~Ss~~~y  131 (322)
T d1r6da_         120 GRVVHVSTNQVY  131 (322)
T ss_dssp             CEEEEEEEGGGG
T ss_pred             ceEEEeecceee
Confidence            579999986543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.93  E-value=0.19  Score=33.74  Aligned_cols=73  Identities=18%  Similarity=-0.003  Sum_probs=45.4

Q ss_pred             eEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCC
Q 040927           37 VIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP  113 (147)
Q Consensus        37 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  113 (147)
                      ..+..+|+.+.+.+...+       ..+|.+   ++.... ..   ...+.....+.+|+.++..++.++...    +-.
T Consensus        60 ~~~~~~D~~~~~~~~~~~-------~~~d~Vih~a~~~~~-~~---~~~~~~~~~~~~n~~gt~~ll~~~~~~----~vk  124 (363)
T d2c5aa1          60 DEFHLVDLRVMENCLKVT-------EGVDHVFNLAADMGG-MG---FIQSNHSVIMYNNTMISFNMIEAARIN----GIK  124 (363)
T ss_dssp             SEEEECCTTSHHHHHHHH-------TTCSEEEECCCCCCC-HH---HHTTCHHHHHHHHHHHHHHHHHHHHHT----TCS
T ss_pred             CcEEEeechhHHHHHHHh-------hcCCeEeeccccccc-cc---ccccccccccccccchhhHHHHhHHhh----Ccc
Confidence            355667887776654433       256776   444322 21   112334667788999999988887654    335


Q ss_pred             eEEEEcCCCCC
Q 040927          114 RIVNASSSMGK  124 (147)
Q Consensus       114 ~iv~isS~~~~  124 (147)
                      ++|++||....
T Consensus       125 ~~i~~SS~~~~  135 (363)
T d2c5aa1         125 RFFYASSACIY  135 (363)
T ss_dssp             EEEEEEEGGGS
T ss_pred             ccccccccccc
Confidence            79999996643

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.90  E-value=0.0082  Score=35.00  Aligned_cols=46  Identities=11%  Similarity=-0.045  Sum_probs=35.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHH
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSL   53 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   53 (147)
                      ++.|.+.|+.|++++.+++..+++.+++      ...++..|.+|++-++++
T Consensus        16 a~~L~~~g~~v~vid~d~~~~~~~~~~~------~~~vi~Gd~~~~~~l~~~   61 (132)
T d1lssa_          16 AKSLSEKGHDIVLIDIDKDICKKASAEI------DALVINGDCTKIKTLEDA   61 (132)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHC------SSEEEESCTTSHHHHHHT
T ss_pred             HHHHHHCCCCcceecCChhhhhhhhhhh------hhhhccCcccchhhhhhc
Confidence            5677889999999999998777654442      256788999998866554

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.84  E-value=0.0054  Score=41.03  Aligned_cols=33  Identities=27%  Similarity=0.254  Sum_probs=25.4

Q ss_pred             HHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           85 AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        85 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      ..+.+++|+.+...+++++...    + .++|++||.+
T Consensus        85 ~~~~~~~Nv~g~~~ll~~~~~~----~-~k~I~~SS~~  117 (312)
T d2b69a1          85 PIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSE  117 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc----C-CcEEEEEChh
Confidence            3567899999999999887543    2 4699999854

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.65  E-value=0.28  Score=31.35  Aligned_cols=96  Identities=21%  Similarity=0.176  Sum_probs=58.0

Q ss_pred             EEEEeecChhhHHHHHHHHHhcCCCceEEE---EecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHH
Q 040927           11 MGEATTKDEKRGLAAVEKLKNSGCDNVIFH---LLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYEL   84 (147)
Q Consensus        11 ~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~---~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~   84 (147)
                      +|++++.+..-+..+.+.|...|- ++..+   .+|++|.++++++++..     .+|++   ++.... ..    ....
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~~D~~d~~~~~~~l~~~-----~~d~vih~a~~~~~-~~----~~~~   71 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQDLDITNVLAVNKFFNEK-----KPNVVINCAAHTAV-DK----CEEQ   71 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTTCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH-HH----HHHC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechhccCCCHHHHHHHHHHc-----CCCEEEeecccccc-cc----cccc
Confidence            577888887777888888876653 23222   24788888888777653     57777   343311 11    2223


Q ss_pred             HHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927           85 AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM  122 (147)
Q Consensus        85 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  122 (147)
                      .+..+..|+.....+...+....     ..+++.||..
T Consensus        72 ~~~~~~~n~~~~~~~~~~~~~~~-----~~~~~~ss~~  104 (281)
T d1vl0a_          72 YDLAYKINAIGPKNLAAAAYSVG-----AEIVQISTDY  104 (281)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHT-----CEEEEEEEGG
T ss_pred             chhhccccccccccccccccccc-----ccccccccce
Confidence            35566778777777766665542     3455666543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.05  E-value=0.036  Score=35.23  Aligned_cols=69  Identities=16%  Similarity=0.020  Sum_probs=42.0

Q ss_pred             eEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCC
Q 040927           37 VIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP  113 (147)
Q Consensus        37 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  113 (147)
                      +....+|+.+.+++       .+.+...|.+   +|.. .       ..........+|+.++..+.+.+..    .+-.
T Consensus        61 i~~~~~D~~~~~~~-------~~~~~~~d~vi~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~  121 (232)
T d2bkaa1          61 VNQEVVDFEKLDDY-------ASAFQGHDVGFCCLGTT-R-------GKAGAEGFVRVDRDYVLKSAELAKA----GGCK  121 (232)
T ss_dssp             CEEEECCGGGGGGG-------GGGGSSCSEEEECCCCC-H-------HHHHHHHHHHHHTHHHHHHHHHHHH----TTCC
T ss_pred             eeeeeecccccccc-------ccccccccccccccccc-c-------cccchhhhhhhcccccceeeecccc----cCcc
Confidence            45555666655443       2334567887   4433 1       1123455667899998888888754    3345


Q ss_pred             eEEEEcCCCCC
Q 040927          114 RIVNASSSMGK  124 (147)
Q Consensus       114 ~iv~isS~~~~  124 (147)
                      ++|++||....
T Consensus       122 ~fi~~Ss~~~~  132 (232)
T d2bkaa1         122 HFNLLSSKGAD  132 (232)
T ss_dssp             EEEEECCTTCC
T ss_pred             ccccCCccccc
Confidence            79999987654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=92.47  E-value=0.065  Score=31.71  Aligned_cols=49  Identities=8%  Similarity=-0.071  Sum_probs=32.0

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHH
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSL   53 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   53 (147)
                      ++.|.+.|.+|+++..+.+...+..++....   .+.++..|.+|++-++++
T Consensus        19 ~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~---~~~vi~Gd~~d~~~L~~a   67 (153)
T d1id1a_          19 ILQLNQRGQNVTVISNLPEDDIKQLEQRLGD---NADVIPGDSNDSSVLKKA   67 (153)
T ss_dssp             HHHHHHTTCCEEEEECCCHHHHHHHHHHHCT---TCEEEESCTTSHHHHHHH
T ss_pred             HHHHHHcCCCEEEEeccchhHHHHHHHhhcC---CcEEEEccCcchHHHHHh
Confidence            3556677888888888776655555554432   367777888887655443

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.38  E-value=0.26  Score=32.89  Aligned_cols=45  Identities=18%  Similarity=0.054  Sum_probs=31.7

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHH
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASV   50 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~   50 (147)
                      ++.|.++|++|+++.|+......  ..+....  .+.++.+|+.|..++
T Consensus        20 v~~Ll~~G~~V~~l~R~~~~~~~--~~~~~~~--~v~~~~gD~~d~~~~   64 (350)
T d1xgka_          20 IRVAAAVGHHVRAQVHSLKGLIA--EELQAIP--NVTLFQGPLLNNVPL   64 (350)
T ss_dssp             HHHHHHTTCCEEEEESCSCSHHH--HHHHTST--TEEEEESCCTTCHHH
T ss_pred             HHHHHhCCCeEEEEECCcchhhh--hhhcccC--CCEEEEeeCCCcHHH
Confidence            56788899999999998654322  2333332  488999999986554

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.38  E-value=0.18  Score=31.19  Aligned_cols=107  Identities=15%  Similarity=0.081  Sum_probs=62.1

Q ss_pred             ccccccCCcE--EEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc--
Q 040927            2 KRSNQVHYSM--GEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW--   74 (147)
Q Consensus         2 ~~~l~~~G~~--v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~--   74 (147)
                      ++.|.++|++  |+...|+.+....       ... ++.++.+|+++.+++.++++       .+|.+   ++.....  
T Consensus        20 ~~~Ll~~g~~v~v~~~~R~~~~~~~-------~~~-~~~~~~~d~~~~~~~~~~~~-------~~d~vi~~a~~~~~~~~   84 (252)
T d2q46a1          20 YKKLKEGSDKFVAKGLVRSAQGKEK-------IGG-EADVFIGDITDADSINPAFQ-------GIDALVILTSAVPKMKP   84 (252)
T ss_dssp             HHHHHHTTTTCEEEEEESCHHHHHH-------TTC-CTTEEECCTTSHHHHHHHHT-------TCSEEEECCCCCCEECT
T ss_pred             HHHHHHCCCcEEEEEEcCCHHHHHh-------ccC-CcEEEEeeeccccccccccc-------cceeeEEEEeecccccc
Confidence            4567788865  5556677654322       222 57889999999988876653       35555   3321100  


Q ss_pred             ------hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927           75 ------YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN  127 (147)
Q Consensus        75 ------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  127 (147)
                            ..........+.....+|+.++..+........    .+...+.++.....+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~~~~  139 (252)
T d2q46a1          85 GFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG----VKHIVVVGSMGGTNPD  139 (252)
T ss_dssp             TCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT----CSEEEEEEETTTTCTT
T ss_pred             ccchhhhhhcccccccchhhhccccccceeecccccccc----ccccccccccccCCCC
Confidence                  011111223345556788888888777765543    3567777776654443

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=91.00  E-value=0.086  Score=31.54  Aligned_cols=45  Identities=13%  Similarity=-0.048  Sum_probs=30.1

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHH
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVD   51 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~   51 (147)
                      ++.|.++|++|++.+|+.++++++.+.+    . .......+..+.....
T Consensus        18 a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~-~~~~~~~~~~~~~~~~   62 (182)
T d1e5qa1          18 LDVLTDSGIKVTVACRTLESAKKLSAGV----Q-HSTPISLDVNDDAALD   62 (182)
T ss_dssp             HHHHHTTTCEEEEEESCHHHHHHHHTTC----T-TEEEEECCTTCHHHHH
T ss_pred             HHHHHhCCCEEEEEECChHHHHHHHhcc----c-ccccccccccchhhhH
Confidence            5678899999999999999877765443    2 2444444554444443

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=90.30  E-value=0.03  Score=32.42  Aligned_cols=45  Identities=13%  Similarity=-0.051  Sum_probs=32.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHH
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSL   53 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   53 (147)
                      ++.|.+.|+.|++++.+++..+++    ...+   ...+.+|.++++.++++
T Consensus        16 a~~L~~~g~~vvvid~d~~~~~~~----~~~~---~~~~~gd~~~~~~l~~a   60 (134)
T d2hmva1          16 VKELHRMGHEVLAVDINEEKVNAY----ASYA---THAVIANATEENELLSL   60 (134)
T ss_dssp             HHHHHHTTCCCEEEESCHHHHHHT----TTTC---SEEEECCTTCTTHHHHH
T ss_pred             HHHHHHCCCeEEEecCcHHHHHHH----HHhC---Ccceeeecccchhhhcc
Confidence            567888999999999998876654    3333   35566898888766543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=90.02  E-value=0.31  Score=29.39  Aligned_cols=66  Identities=12%  Similarity=-0.019  Sum_probs=41.7

Q ss_pred             CccccccCCcEEEEeecChhhHHHHHHH---------------HHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 040927            1 MKRSNQVHYSMGEATTKDEKRGLAAVEK---------------LKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLD   65 (147)
Q Consensus         1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~---------------l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   65 (147)
                      |++.|.+.|++|++.+|+.++.+++.+.               +...-. +...+...+.+.+.+....+.+.....+-+
T Consensus        17 mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~-~~~~ii~~~~~~~~v~~v~~~l~~~~~~g~   95 (176)
T d2pgda2          17 LILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLK-KPRRIILLVKAGQAVDNFIEKLVPLLDIGD   95 (176)
T ss_dssp             HHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBC-SSCEEEECSCTTHHHHHHHHHHHHHCCTTC
T ss_pred             HHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhc-ccceEEEecCchHHHHHHHHHHHhccccCc
Confidence            4677889999999999999887776543               111111 233444456666777777777766543334


Q ss_pred             EE
Q 040927           66 IL   67 (147)
Q Consensus        66 ~l   67 (147)
                      ++
T Consensus        96 ii   97 (176)
T d2pgda2          96 II   97 (176)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=88.55  E-value=0.077  Score=34.55  Aligned_cols=53  Identities=8%  Similarity=-0.159  Sum_probs=33.2

Q ss_pred             ccccccCCcEEEEeecChhhHH-HHHHHHHhcCCCceEEEEecCCCHHHHHHHH
Q 040927            2 KRSNQVHYSMGEATTKDEKRGL-AAVEKLKNSGCDNVIFHLLDVTDPASVDSLV   54 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   54 (147)
                      ++.|.++|++|+++.|+..... .....+......++.++.+|+.|.+++.+.+
T Consensus        20 ~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~   73 (312)
T d1qyda_          20 VNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL   73 (312)
T ss_dssp             HHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH
T ss_pred             HHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhc
Confidence            4567889999999998643211 1111122111124888999999988876654

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=84.51  E-value=0.71  Score=28.04  Aligned_cols=45  Identities=16%  Similarity=-0.037  Sum_probs=30.7

Q ss_pred             cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCH
Q 040927            3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP   47 (147)
Q Consensus         3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~   47 (147)
                      ..|+++|++|+.++.+...++.+.+.....+...+.+...|+.+.
T Consensus        46 ~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~   90 (198)
T d2i6ga1          46 LYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL   90 (198)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC
T ss_pred             HHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc
Confidence            456778888888888887777766666555543466666666543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.49  E-value=3.3  Score=26.30  Aligned_cols=58  Identities=12%  Similarity=0.060  Sum_probs=44.3

Q ss_pred             cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCc
Q 040927            3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKL   64 (147)
Q Consensus         3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   64 (147)
                      +.|..+|-.+++++-+..-...+...+.+.|.   .++.+| .+++.+++..+++.+..+.+
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga---~V~~~~-r~~~~l~~~~~~~~~~~~~~   59 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGA---VIHTCA-RNEYELNECLSKWQKKGFQV   59 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEE-SCHHHHHHHHHHHHHTTCCE
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEE-CCHHHHHHHHHHHHhcCCce
Confidence            45666798999999998888999999988874   444566 56788888888887654443

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=83.14  E-value=0.76  Score=27.83  Aligned_cols=58  Identities=14%  Similarity=0.042  Sum_probs=33.4

Q ss_pred             CCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc-CCccEE
Q 040927            8 HYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL   67 (147)
Q Consensus         8 ~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l   67 (147)
                      .|++|+.+.|+.+..++..+.+++.|.+  .++.-|-.+..+....+.++.... +.+|++
T Consensus        53 ~Ga~vI~~v~~~~~~~~~~~~~~~lGad--~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv  111 (189)
T d1gu7a2          53 LNFNSISVIRDRPNLDEVVASLKELGAT--QVITEDQNNSREFGPTIKEWIKQSGGEAKLA  111 (189)
T ss_dssp             HTCEEEEEECCCTTHHHHHHHHHHHTCS--EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEE
T ss_pred             cCCeEEEEEecccccchHHhhhhhcccc--EEEeccccchhHHHHHHHHHHhhccCCceEE
Confidence            4888888888877777777777777753  333332222233334444443332 456766

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=82.32  E-value=0.39  Score=30.72  Aligned_cols=53  Identities=9%  Similarity=-0.040  Sum_probs=33.1

Q ss_pred             ccccccCCcEEEEeecChhhH--HHHHHHHHhcCCCceEEEEecCCCHHHHHHHH
Q 040927            2 KRSNQVHYSMGEATTKDEKRG--LAAVEKLKNSGCDNVIFHLLDVTDPASVDSLV   54 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~--~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   54 (147)
                      ++.|.+.|++|+++.|+....  ......+.......+.++.+|+.+.......+
T Consensus        20 ~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   74 (307)
T d1qyca_          20 AKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAV   74 (307)
T ss_dssp             HHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHH
T ss_pred             HHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhh
Confidence            456788999999999864321  11112222221224788889999988776654

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=82.06  E-value=3.3  Score=26.36  Aligned_cols=55  Identities=13%  Similarity=0.115  Sum_probs=43.2

Q ss_pred             cCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCc
Q 040927            7 VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKL   64 (147)
Q Consensus         7 ~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   64 (147)
                      .+|..+++++-+..-...+...+...|.   .++.+|..+.+..+++.+++.+..+.+
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga---~Vvi~~~~~~~~~~~~~~~~~~~g~~~   70 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGC---KVIVNYANSTESAEEVVAAIKKNGSDA   70 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHHHHHHHHHHHHHTTCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCchHHHHHHHHHHHhhCCce
Confidence            4588899999998889999999988874   456688888888888888877654443

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=81.40  E-value=0.65  Score=29.21  Aligned_cols=44  Identities=11%  Similarity=0.075  Sum_probs=32.4

Q ss_pred             ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCC
Q 040927            2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTD   46 (147)
Q Consensus         2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~   46 (147)
                      +..|+++|.+|+.++.+.+.++.+.+.+...+. ++.++..|+.+
T Consensus        52 ~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~-~v~~~~~d~~~   95 (246)
T d1y8ca_          52 TENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISN   95 (246)
T ss_dssp             HHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGG
T ss_pred             HHHHHHhCCccEeeccchhhhhhccccccccCc-cceeeccchhh
Confidence            346788899999999998887777666666554 57777777654

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=80.11  E-value=1.5  Score=26.89  Aligned_cols=43  Identities=14%  Similarity=-0.045  Sum_probs=28.8

Q ss_pred             cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC
Q 040927            3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT   45 (147)
Q Consensus         3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~   45 (147)
                      ..+++.|++|+.++-+.+.++.+.+.+...+..++.++.+|..
T Consensus        31 ~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~   73 (231)
T d1vl5a_          31 NAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE   73 (231)
T ss_dssp             HHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-
T ss_pred             HHHHHhCCEEEEEECCHHHHhhhhhcccccccccccccccccc
Confidence            4567889999999999887777666665544434555555544