Citrus Sinensis ID: 040959

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-
Protein Sequence
MATHKILMTTILFTLTILLCFPTTPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPSLTLFAPTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRSPIHNNHSNGNVWFRPLNHTAAFPPLPLVPRIQTNPSPVNPTIVSPSQVPIPASFPVLSPAPGPEGLHGYTPAESPEGHVVLTGKPIKHKKAKQDTDRTSSSNVNDTVPVPPLANAPRTPTNRKNRTDSSPVNHHTVVSPSQTIPASSSPIDSAVVVSPPALAPSRGSASLFGYFLAEPAENQDVLTLDSPSPAPMTNDLKRSRKIREVFVGGEICAVG
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccHHHHHHHHHccccccccccccEEEEccccHHHHcccccccHHHHHHHHHHHcccccccHHHHHHHcccccccccccccccccccccEEEEEcccccEEEccEEEcccccEEcccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccEEEcccccccccccccHHHHHHccccccccEEEccccccccccHHHHHHHHcEEEEEccEEEEcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccEEEEcccccHHEEEccccccHHHHHHHHHHccccEEcHHHHHHcccccccccccccccccccccEEEEccccccEEEEccEEEEccccccccEEEEEcccccEEEEcccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccEEcccccccccEEccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccEEEEcccccccccccHHHHHHEcccccccccEEEccccccccccccHHHcccEEEEEEccEEEEcc
Coil and Loop (DISEMBL)
MATHKILMTTILFTLTILlcfpttpagiptsdLDAVLLLLHAGGHTLFANAIATSDLLFDllslpsltlfaptdpslfavdmtqtppfyLSILRLHVLPLRLSWTELLQLispsnnnnnssrlptllpsrdlhvtrgdsgallvGGVQVVMPGLYYSSYVAVHGLAgiltfrspihnnhsngnvwfrplnhtaafpplplvpriqtnpspvnptivspsqvpipasfpvlspapgpeglhgytpaespeghvvltgkpikhkkakqdtdrtsssnvndtvpvpplanaprtptnrknrtdsspvnhhtvvspsqtipassspidsavvvsppalapsrgsaslfgyflaepaenqdvltldspspapmtndlkrsRKIREVFVGGEICAVG
Flexible Loop (DISEMBL)
MATHKILMTTILFTLTILLCFPTTPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPSLTLFAPTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLIspsnnnnnssrlpTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRSPIHNNHSNGNVWFRPLNHTAAFPPLPLVPRIQTNPSPVNPTIVSPSQVPIPASFPVLSPAPGPEGLHGYTPAESPEGHVVLTGKPIkhkkakqdtdrtsssnvndtvpvpplanaprtptnrknrtdsspvnhhtvvspsqtipasssPIDSAVVVSPPALAPSRGSASLFGYFLAEPAENQDvltldspspapmtndlkrsrkIREVFVGGEICAVG
Low Complexity Region (SEG)
MATHKILMttilftltillcfpttpAGIPTSDLDAVLLLLHAGGHTLFANAIatsdllfdllslpsltlfaptDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTEllqlispsnnnnnssrlptllpsRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRSPIHNNHSNGNVWFRPLNHTAAFPPLPLVPRIQTNPSPVNPTIVSPSQVPIPASFPVLSPAPGPEGLHGYTPAESPEGHVVLTGKPIKHKKAKQDTDRTSSSNVNDTVPVPPLANAPRTPTNRKNRTDSSPVNHHTVVSPSQTIPASSSPIDSAVVVSPPALAPSRGSASLFGYFLAEPAENQDVLTLDSPSPAPMTNDLKRSRKIREVFVGGEICAVG
Disordered region (IsUnstruct)
****KILMTTILFTLTILLCFPTTPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPSLTLFAPTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLI*********************HVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRSPIHNNHSNGNVWFRPLNHTAAFPPLPLVPR*******************************************************************************************************************************************LFGYFLA*****************************REVFVGGEIC***
Disordered Region (DISOPRED)
****KILMTTILFTLTILLCFPTTP**I*TSDLDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPSLTLFAPTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTF************************************************QVP**********************AESPEGHVVLTGK**************************************************TVVS**QT*****SPIDSAVVVSPPALAPSRGSASLFGYFLAEPAENQDVLTLDS*S********K*SRKIREVFVGGEICAVG
Disordered Region (DISEMBL)
MATHKILMTTILFTLTILLCFPTTPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPSLTLFAPTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRSPIHNNHSNGNVWFRPLNHTAAFPPLPLVPRIQTNPSPVNPTIVSPSQVPIPASFPVLSPAPGPEGLHGYTPAESPEGHVVLTGKP******************NDTVPVPPLANA*************************************AVVVSPPALAPSRGSASLFGYFLAEPAENQDVLTLDSPSPAPMTNDLKRSRKIREVFVGGEICAVG
Disordered Region (DISPRO)
***HKILMTTILFTLTILLCFPTTPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPSLTLFAPTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRSPIHNNHSNGNVWFRPLNHTAAFPPLPLVPRIQTNPSPVNPTIVSPSQVPIPASFPVLSPAPGPEGLHGYTPAESP****************************NDTVPVPPLANAPR**************************P*SSSPIDSAVVVSPPALAPSRGSASLFGYFLAEPAENQDVLTLDSPSPAPMTNDLKRSRKIREVFVGGEICAVG
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATHKILMTTILFTLTILLCFPTTPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPSLTLFAPTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRSPIHNNHSNGNVWFRPLNHTAAFPPLPLVPRIQTNPSPVNPTIVSPSQVPIPASFPVLSPAPGPEGLHGYTPAESPEGHVVLTGKPIKHKKAKQDTDRTSSSNVNDTVPVPPLANAPRTPTNRKNRTDSSPVNHHTVVSPSQTIPASSSPIDSAVVVSPPALAPSRGSASLFGYFLAEPAENQDVLTLDSPSPAPMTNDLKRSRKIREVFVGGEICAVG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	391	2.2.26 [Sep-21-2011]
Q5Q0H2	248	Fasciclin-like arabinogal	yes	no	0.401	0.633	0.493	5e-32
Q9FL53	353	Fasciclin-like arabinogal	no	no	0.212	0.235	0.265	0.0001

>sp|Q5Q0H2|FLA19_ARATH Fasciclin-like arabinogalactan protein 19 OS=Arabidopsis thaliana GN=FLA19 PE=2 SV=2

 Score =  139 bits (349), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 82/166 (49%), Positives = 106/166 (63%), Gaps = 9/166 (5%)

Query: 11  ILFTLTILLCFPTTPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPSLTLF 70
           I     I+LC P    G+P  +L+  + +L   G  LFANAI TSDLLFDLLS  SLTLF
Sbjct: 13  IFLGALIILCLPHPSTGVPLEELERAIAILRVRGRALFANAIITSDLLFDLLSDESLTLF 72

Query: 71  APTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSR 130
           APTD  LF +DMT + PFY+S LRLH +PLRLS + L  L        NSS LPTLLPS 
Sbjct: 73  APTDSMLFDLDMTHSLPFYVSTLRLHSVPLRLSLSGLRSL-------PNSSSLPTLLPSH 125

Query: 131 DLHVTRGDSG--ALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRSP 174
            L +T+  S   ++ + GVQ+++PGL+   ++AVHGLA +L   +P
Sbjct: 126 RLLLTKHSSSNDSIFLDGVQLLIPGLFDGQHIAVHGLADLLPLTAP 171

May be a cell surface adhesion protein.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL53|FLA21_ARATH Fasciclin-like arabinogalactan protein 21 OS=Arabidopsis thaliana GN=FLA21 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 11/94 (11%)

Query: 80  VDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGD- 138
           V ++   PF   ++R H+L  RL++ +   +       ++ + + TL P +DL +TR + 
Sbjct: 262 VSLSSASPFLYEVVRHHILVQRLTYKDFASM-------SDKATVKTLDPYQDLTITRRNV 314

Query: 139 ---SGALLVGGVQVVMPGLYYSSYVAVHGLAGIL 169
               G  ++ GV++V P ++ SS   +HG++  L
Sbjct: 315 NSSGGDFMISGVEIVDPDMFSSSNFVIHGISHTL 348

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	391
297844424	233	hypothetical protein ARALYDRAFT_471711 [	0.401	0.673	0.487	2e-30
15218081	248	fasciclin-like arabinogalactan protein 1	0.401	0.633	0.493	3e-30
55978707	248	hypothetical protein AT1G15190 [Arabidop	0.381	0.600	0.506	1e-29
357445655	354	Fasciclin-like arabinogalactan protein [	0.501	0.553	0.399	6e-27
55978709	218	hypothetical protein AT1G15190 [Arabidop	0.327	0.587	0.383	4e-18
224126893	283	predicted protein [Populus trichocarpa]	0.373	0.515	0.423	2e-15
224056074	256	predicted protein [Populus trichocarpa]	0.373	0.570	0.369	7e-13
157273670	276	fasciclin-like arabinogalactan protein 1	0.465	0.659	0.398	1e-08
255578410	191	hypothetical protein RCOM_0009520 [Ricin	0.196	0.403	0.512	6e-07
224101815	348	predicted protein [Populus trichocarpa]	0.314	0.353	0.338	1e-06

>gi|297844424|ref|XP_002890093.1| hypothetical protein ARALYDRAFT_471711 [Arabidopsis lyrata subsp. lyrata] gi|297335935|gb|EFH66352.1| hypothetical protein ARALYDRAFT_471711 [Arabidopsis lyrata subsp. lyrata]

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/166 (48%), Positives = 108/166 (65%), Gaps = 9/166 (5%)

Query: 11  ILFTLTILLCFPTTPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPSLTLF 70
           I     I+LC P    G+P  +L+  + +L   G  LFANAI TSDLLFDLLS  SLTLF
Sbjct: 13  IFLGALIILCLPHPSTGVPLEELERAIAVLRVRGRALFANAIITSDLLFDLLSDESLTLF 72

Query: 71  APTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSR 130
           APTD  LFA+DMT + PFY+S LRLH +PLRLS ++L  L        N+S +PTLLPS 
Sbjct: 73  APTDSMLFALDMTHSLPFYVSTLRLHSVPLRLSLSDLRSL-------PNASSIPTLLPSH 125

Query: 131 DLHVTRGDSG--ALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRSP 174
            L +T+  S   ++ + GVQ+++PGL+   ++AVHGLA +L   +P
Sbjct: 126 RLLLTKLSSSNDSIFLDGVQLLLPGLFDGQHIAVHGLADLLPLTAP 171

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218081|ref|NP_172971.1| fasciclin-like arabinogalactan protein 19 [Arabidopsis thaliana] gi|116270727|sp|Q5Q0H2.2|FLA19_ARATH RecName: Full=Fasciclin-like arabinogalactan protein 19; Flags: Precursor gi|5103817|gb|AAD39647.1|AC007591_12 F9L1.13 [Arabidopsis thaliana] gi|60547561|gb|AAX23744.1| hypothetical protein At1g15190 [Arabidopsis thaliana] gi|332191159|gb|AEE29280.1| fasciclin-like arabinogalactan protein 19 [Arabidopsis thaliana]

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/166 (49%), Positives = 106/166 (63%), Gaps = 9/166 (5%)

Query: 11  ILFTLTILLCFPTTPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPSLTLF 70
           I     I+LC P    G+P  +L+  + +L   G  LFANAI TSDLLFDLLS  SLTLF
Sbjct: 13  IFLGALIILCLPHPSTGVPLEELERAIAILRVRGRALFANAIITSDLLFDLLSDESLTLF 72

Query: 71  APTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSR 130
           APTD  LF +DMT + PFY+S LRLH +PLRLS + L  L        NSS LPTLLPS 
Sbjct: 73  APTDSMLFDLDMTHSLPFYVSTLRLHSVPLRLSLSGLRSL-------PNSSSLPTLLPSH 125

Query: 131 DLHVTRGDSG--ALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRSP 174
            L +T+  S   ++ + GVQ+++PGL+   ++AVHGLA +L   +P
Sbjct: 126 RLLLTKHSSSNDSIFLDGVQLLIPGLFDGQHIAVHGLADLLPLTAP 171

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|55978707|gb|AAV68815.1| hypothetical protein AT1G15190 [Arabidopsis thaliana]

 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/158 (50%), Positives = 102/158 (64%), Gaps = 9/158 (5%)

Query: 11  ILFTLTILLCFPTTPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPSLTLF 70
           I     I+LC P    G+P  +L+  + +L   G  LFANAI TSDLLFDLLS  SLTLF
Sbjct: 13  IFLGALIILCLPHPSTGVPLEELERAIAILRVRGRALFANAIITSDLLFDLLSDESLTLF 72

Query: 71  APTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSR 130
           APTD  LF +DMT + PFY+S LRLH +PLRLS + L  L        NSS LPTLLPS 
Sbjct: 73  APTDSMLFDLDMTHSLPFYVSTLRLHSVPLRLSLSGLRSL-------PNSSSLPTLLPSH 125

Query: 131 DLHVTRGDSG--ALLVGGVQVVMPGLYYSSYVAVHGLA 166
            L +T+  S   ++ + GVQ+++PGL+   ++AVHGLA
Sbjct: 126 RLLLTKHSSSNDSIFLDGVQLLIPGLFDGQHIAVHGLA 163

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445655|ref|XP_003593105.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] gi|355482153|gb|AES63356.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/238 (39%), Positives = 120/238 (50%), Gaps = 42/238 (17%)

Query: 12  LFTLTILLCFP----TTPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLL----- 62
           +F L +LL       T    IP  + D++L  L + G+ LF NAI TSDL  DLL     
Sbjct: 4   IFPLMVLLLLVANAVTVVNSIPNREFDSMLNTLRSRGYHLFCNAILTSDLRIDLLDPNSN 63

Query: 63  SLPSLTLFAPTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSR 122
           +  S T FAPTD SLFA+DMTQT   Y   LR H++P RL+ +EL  L        N   
Sbjct: 64  ATNSFTFFAPTDSSLFALDMTQTASSYTDTLRYHIIPRRLTLSELRLL-------PNGYT 116

Query: 123 LPTLLPSRDLHVTR--GDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRS------- 173
           LPT+L +R +  TR  G S    VGGV+V  PGL+Y  +V VHGLAGIL  RS       
Sbjct: 117 LPTMLSTRRISFTRRSGSSSVTTVGGVEVAFPGLFYGRHVTVHGLAGILNVRSVDFTSPA 176

Query: 174 --PIHNNHSNGNVWFRPLNHTAAFPPLPLVPRIQTNPSPVNPTIVSPSQVPIPASFPV 229
             P++  HS  +  F P              RI  +P   N T++ P  VP   SF V
Sbjct: 177 PAPVNPIHSPDHRHFTPR-------------RIPHSPEKQNQTVLDP--VPRSVSFNV 219

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|55978709|gb|AAV68816.1| hypothetical protein AT1G15190 [Arabidopsis thaliana]

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 85/167 (50%), Gaps = 39/167 (23%)

Query: 10  TILFTLTILLCFPTTPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPSLTL 69
            I     I+LC P    G+P  +L+  + +L   G  LFANAI TSDLLFDLLS  SLTL
Sbjct: 12  AIFLGALIILCLPHPSTGVPLEELERAIAILRVRGRALFANAIITSDLLFDLLSDESLTL 71

Query: 70  FAPTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPS 129
           FAPTD  LF +DMT +                                     LPTLLPS
Sbjct: 72  FAPTDSMLFDLDMTHS-------------------------------------LPTLLPS 94

Query: 130 RDLHVTRGDSG--ALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRSP 174
             L +T+  S   ++ + GVQ+++PGL+   ++AVHGLA +L   +P
Sbjct: 95  HRLLLTKHSSSNDSIFLDGVQLLIPGLFDGQHIAVHGLADLLPLTAP 141

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224126893|ref|XP_002329499.1| predicted protein [Populus trichocarpa] gi|222870179|gb|EEF07310.1| predicted protein [Populus trichocarpa]

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 10/156 (6%)

Query: 24  TPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLL-------SLPSLTLFAPTDPS 76
           T A +   +LD  LL L + G+TLF NAI+TSDL   LL       S  + TLF P D  
Sbjct: 29  TTATLTDQELDFALLSLRSYGYTLFPNAISTSDLRLQLLNQSSNATSTSTFTLFCPPDSL 88

Query: 77  LFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPT--LLPSRDLHV 134
           LF+VD+  T P Y   L LHV P RLS ++L  L + S      S +P   LL +  L  
Sbjct: 89  LFSVDLASTAPHYTKSLFLHVSPSRLSTSDLRNLTAASGGTYIDSLVPNHRLLITNSLAQ 148

Query: 135 TRGD-SGALLVGGVQVVMPGLYYSSYVAVHGLAGIL 169
             G   G++LV  V+V +P L+  S +AVHGL GIL
Sbjct: 149 LNGTVDGSILVNRVRVSVPDLFLGSDIAVHGLDGIL 184

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056074|ref|XP_002298724.1| predicted protein [Populus trichocarpa] gi|222845982|gb|EEE83529.1| predicted protein [Populus trichocarpa]

 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 11/157 (7%)

Query: 24  TPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLL--------SLPSLTLFAPTDP 75
           T A +   +LD  L  L + G+TLF NAIATSDL    L        S  + TLF+P D 
Sbjct: 29  TTAKLTDQELDFALFSLRSHGYTLFPNAIATSDLRLQFLNQSNHAKSSFSTFTLFSPPDS 88

Query: 76  SLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPT---LLPSRDL 132
            LF++D+      Y   L LHV P RLS ++L  L + S   +  S +P    L+ +   
Sbjct: 89  LLFSLDLASAASHYTKSLSLHVSPFRLSTSDLRNLTASSGGASIDSLVPNHRLLIYNSLA 148

Query: 133 HVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGIL 169
           HV      ++LV  V+V +P L+    +AVHGL GI+
Sbjct: 149 HVNGTVVESVLVNRVRVSVPDLFLGRSIAVHGLDGII 185

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|157273670|gb|ABV27489.1| fasciclin-like arabinogalactan protein 18 [Gossypium hirsutum]

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/211 (39%), Positives = 110/211 (52%), Gaps = 29/211 (13%)

Query: 14  TLTILLCFPT-TPAGIPTSDLDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPS---LTL 69
           T+ ILL   T + A + + +LDA +L+L + G+TLF NAI+TSDL   LLS  +    TL
Sbjct: 9   TIVILLLLTTVSTADLTSKELDAAILVLQSRGYTLFPNAISTSDLQVRLLSSQNSSIFTL 68

Query: 70  FAPTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPS 129
           FAP D  LF++D+  +   Y   L LHV P  LS ++LL L  P+        + TLLP+
Sbjct: 69  FAPPDSLLFSLDLLSSARLYTFSLFLHVSPHFLSSSDLLALPRPAF-------IDTLLPN 121

Query: 130 RDLHV-----TRGDSGAL--LVGGVQVVMPGLYYSSYVAVHGLAGILTFRSPIHNNHSNG 182
           R L V     TR  +  L   V GV V +P L+  S + VHGL GIL  R  I +  S G
Sbjct: 122 RRLFVEHAMSTRNGTALLTVSVDGVVVSVPDLFLGSNIVVHGLDGILVAR--IRSLVSEG 179

Query: 183 NVWFRPLNHTAAFPPLPLVPRIQTNPSPVNP 213
           +      N  A  P  P     QT  SP NP
Sbjct: 180 SD-----NAIAEPPKFP----YQTYVSPANP 201

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578410|ref|XP_002530070.1| hypothetical protein RCOM_0009520 [Ricinus communis] gi|223530423|gb|EEF32310.1| hypothetical protein RCOM_0009520 [Ricinus communis]

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 1/78 (1%)

Query: 31  SDLDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPS-LTLFAPTDPSLFAVDMTQTPPFY 89
            +L+A L  L + G+TLF NAIATSDL   LLSL S  TLF+P DP LF++D++     Y
Sbjct: 28  QELEAALFTLRSQGYTLFPNAIATSDLRPLLLSLNSTFTLFSPPDPLLFSLDLSSPASHY 87

Query: 90  LSILRLHVLPLRLSWTEL 107
           +  L  HV PLRLS ++L
Sbjct: 88  VHSLLRHVSPLRLSMSQL 105

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101815|ref|XP_002312431.1| predicted protein [Populus trichocarpa] gi|222852251|gb|EEE89798.1| predicted protein [Populus trichocarpa]

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 16/139 (11%)

Query: 67  LTLFAPTDPSL--FAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLP 124
           LT+ AP D  L  F  D +     Y SI   HV+P ++SW +L+ L       ++   LP
Sbjct: 214 LTILAPVDEVLKGFMGDFSD----YRSIFLRHVVPCKISWRDLVSL-------DDGVVLP 262

Query: 125 TLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRSP--IHNNHSNG 182
           T L    ++VT   S  L+  GVQV++P +Y +S++ VHGL G L  + P    +N    
Sbjct: 263 TYLRGFKINVTVS-STFLMFNGVQVIVPEIYSNSWLTVHGLGGSLVMQEPTATASNAEKI 321

Query: 183 NVWFRPLNHTAAFPPLPLV 201
            V F+ +    AF  L L 
Sbjct: 322 VVDFKAIKVLIAFSFLLLC 340

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	391
TAIR|locus:2037873	248	AT1G15190 "AT1G15190" [Arabido	0.491	0.774	0.298	8.2e-16
TAIR|locus:2043959	669	IQD14 "AT2G43680" [Arabidopsis	0.335	0.195	0.34	5.9e-06
TAIR|locus:504954886	1113	AT5G56890 [Arabidopsis thalian	0.452	0.159	0.282	9e-06
TAIR|locus:2206355	397	AT1G79480 [Arabidopsis thalian	0.386	0.380	0.283	7.7e-05
TAIR|locus:2090419	334	CWLP "cell wall-plasma membran	0.452	0.529	0.252	0.00012
TAIR|locus:2154679	370	ENODL1 "early nodulin-like pro	0.388	0.410	0.284	0.00019
ZFIN|ZDB-GENE-041014-324	740	prg4b "proteoglycan 4b" [Danio	0.429	0.227	0.283	0.00025
UNIPROTKB|F1P3F4	784	ENAH "Uncharacterized protein"	0.442	0.220	0.292	0.00044
TAIR|locus:2137672	349	ENODL2 "early nodulin-like pro	0.360	0.404	0.301	0.00048
FB|FBgn0261714	864	Cpn "Calphotin" [Drosophila me	0.450	0.203	0.275	0.00064

TAIR|locus:2037873 AT1G15190 "AT1G15190" [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 8.2e-16, P = 8.2e-16
 Identities = 63/211 (29%), Positives = 93/211 (44%)

Query:    27 GIPTSDLDAVLLLLHAGGHTLFANAIXXXXXXXXXXXXXXXXXXXXXDPSLFAVDMTQTP 86
             G+P  +L+  + +L   G  LFANAI                     D  LF +DMT + 
Sbjct:    29 GVPLEELERAIAILRVRGRALFANAIITSDLLFDLLSDESLTLFAPTDSMLFDLDMTHSL 88

Query:    87 PFYLSILRLHVLPLRLSWTEXXXXXXXXXXXXXXXXXXXXXXXRDLHVTRGDSGALLVGG 146
             PFY+S LRLH +PLRLS +                           H +  DS  + + G
Sbjct:    89 PFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLLTK---HSSSNDS--IFLDG 143

Query:   147 VQVVMPGLYYSSYVAVHGLAGILTFRSPIHNNHSNGNVWFRPLNHTAAFPPLP--LVPRI 204
             VQ+++PGL+   ++AVHGLA +L   +P     S+ N   R +  + A    P  L  R 
Sbjct:   144 VQLLIPGLFDGQHIAVHGLADLLPLTAP-----SSPN---RLVEDSTALAKSPWFLGSRF 195

Query:   205 QTNPSPVNPTI-VSPSQVPIPASFPVLSPAP 234
                P P    + +SP++ P   S   +SP+P
Sbjct:   196 SPAPEPYFAFMDLSPAESP---SVEEVSPSP 223

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2043959 IQD14 "AT2G43680" [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
 Identities = 51/150 (34%), Positives = 69/150 (46%)

Query:   187 RPLNHTAAFPPLPLVPRIQTNPSPVNPTIVSPSQVPIP-ASFP-VLSPAPGPEGLHGYTP 244
             RP  ++A+ PP P  PR+  +P P +P + SP +VP P A  P  LSP P P        
Sbjct:    84 RPNPYSASPPPRPASPRV-ASPRPTSPRVASP-RVPSPRAEVPRTLSPKP-PS-----PR 135

Query:   245 AESPEGHVVLTGKPIKHKKAKQDTDRTSSSNVND-TVPVPPLANAPRTPTNRKNRTDSSP 303
             AE P     L+ KP      + D  R+ S    D + P    ANAP T      R  S  
Sbjct:   136 AEVPRS---LSPKP---PSPRADLPRSLSPKPFDRSKPSSASANAPPTLRPASTRVPSQR 189

Query:   304 VNHHTVVSPSQTIPASSSPIDSAVVVSPPA 333
             +  H+V SP  + P  +SP   A+   PP+
Sbjct:   190 ITPHSVPSPRPSSPRGASP--QAISSKPPS 217

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:504954886 AT5G56890 [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 56/198 (28%), Positives = 86/198 (43%)

Query:   188 PLNHTAAFPPLPLVPRIQTNPSP-VNPTI--VSPSQVPIPASFPVL-SPAPGPEGLHGYT 243
             P+  + A  P+   P I  + +P V+P I  ++PS  P+P S P   SP   P   H   
Sbjct:   190 PIEKSIA--PVASPPTISIDIAPPVHPVIPKLTPSSSPVPTSTPTKGSPRRNPPTTHPVF 247

Query:   244 PAESPEGHVVLTGKPIKHKKAKQDTDRTSSSNV---NDTV-PVPPLANAPRTPTNRKNRT 299
             P ESP         P+KH     + D + S      N+T  P+P   +    P+   +  
Sbjct:   248 PIESPAVSPDHAANPVKHPPPSDNGDDSKSPGAAPANETAKPLPVFPHKASPPSIAPSAP 307

Query:   300 DSSPVNHHTVVSPSQTIPASSSPIDSAVVVSPPALAPSRGSASLFGYFLAEPAENQDVLT 359
               +  +HHT  SPS T P  S+P  S V   P + +P   S+    +      E + +  
Sbjct:   308 KFNRHSHHT--SPSTTPPPDSTP--SNVHHHPSSPSPPPLSSHHQHH-----QERKKIA- 357

Query:   360 LDSPSPAPMTNDLKRSRK 377
              DSP+P+P+   L   +K
Sbjct:   358 -DSPAPSPLPPHLISPKK 374

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2206355 AT1G79480 [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 7.7e-05, P = 7.7e-05
 Identities = 47/166 (28%), Positives = 71/166 (42%)

Query:   169 LTFRSPIHNNHSNGNVWFRPLNHTAAFPPLPLVPRIQTNPSPVNPTIVSPSQVPIPASFP 228
             L    P+  + S+ N     ++ T   PP   +P +   P    P  ++P   P  +S+P
Sbjct:    62 LNLAQPLDYS-SSSNTQPYGVSTTLTLPPYVSLPPLSV-PGNAPPFCINPPNTPPSSSYP 119

Query:   229 VLSPAPGPEGLHGYTPAESPEGHVVLTGKPIKHKKAKQDTDRTSSSNVNDTVPVPPLA-- 286
              LSP PGP  L    P +S          P   + +       SSSN N   P PP+   
Sbjct:   120 GLSPPPGPITLPN--PPDSSSNP---NSNPNPPESSSNPNPPDSSSNPNSN-PNPPVTVP 173

Query:   287 NAPRTPTNRKNRTDSSPVNHHTVVSPSQTIPASSSPIDSAVVVSPP 332
             N P + +N  N  DSS  N ++  +P ++   SS+P     V +PP
Sbjct:   174 NPPESSSN-PNPPDSSS-NPNSNPNPPES---SSNPNPPVTVPNPP 214

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2090419 CWLP "cell wall-plasma membrane linker protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
 Identities = 48/190 (25%), Positives = 71/190 (37%)

Query:   187 RPLNHTAAFPPLPLVPRIQTNPSP--VNPTIVSPSQVPIPASFPVLSPAPGPEGL---HG 241
             +P    A  PP P  P ++ +P P  V P    P+  P P    V  P P P      H 
Sbjct:    53 KPPKPPAVKPPTPKPPTVKPHPKPPTVKPHPKPPTVKPHPKPPTVKPPHPKPPTKPHPHP 112

Query:   242 YTP-AESPEGHVVLTGKPIKHKKAKQDTDRTSSSNVNDTVPVPPLANAPRTPTNRKNRTD 300
               P  + P      T KP    K    T +  ++    + P PP    P TP      T 
Sbjct:   113 KPPIVKPPTKPPPSTPKP--PTKPPPSTPKPPTTKPPPSTPKPPHHKPPPTPCPPPTPTP 170

Query:   301 SSPV-NHHTVVSPSQTIPASSSPIDSAVVVSPPALAPSRGSASLFGYFLAEPAENQDVLT 359
             + PV    T   P  T P  + P+ +    +PP + P   +  +    +  P     V+T
Sbjct:   171 TPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVITPPTPTPPV----ITPPTPTPPVVT 226

Query:   360 LDSPSPAPMT 369
               +P+P  +T
Sbjct:   227 PPTPTPPVVT 236

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2154679 ENODL1 "early nodulin-like protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
 Identities = 47/165 (28%), Positives = 66/165 (40%)

Query:   188 PLNHTAAFPPLPLVPRIQT--NPSPVNPTIVSPSQVPIPASFPVLSPAPGPEGLHGYTPA 245
             P++HT A  P           +PSP +P+ VS S    PA  P  SPA  P     + P+
Sbjct:   187 PISHTPALSPSHATSHSPATPSPSPKSPSPVSHSPSHSPAHTPSHSPAHTPSHSPAHAPS 246

Query:   246 ESPEGHVVLTGKPIKHKKAKQDTDRTSSSNVNDTVPVPPL--ANAPRTP---TNRKNRTD 300
              SP  H   +  P  H  +       S S      P P    A +P TP   T +     
Sbjct:   247 HSP-AHAP-SHSPA-HAPSHSPAHSPSHSPATPKSPSPSSSPAQSPATPSPMTPQSPSPV 303

Query:   301 SSPVNHHTVVSPSQTIPASSSPIDSAVV---VSPPALAPSRGSAS 342
             SSP    +     Q+ P + SP ++      ++ PA +P   SAS
Sbjct:   304 SSPSPDQSAAPSDQSTPLAPSPSETTPTADNITAPAPSPRTNSAS 348

GO:0005507 "copper ion binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009055 "electron carrier activity" evidence=IEA

GO:0031225 "anchored to membrane" evidence=TAS

ZFIN|ZDB-GENE-041014-324 prg4b "proteoglycan 4b" [Danio rerio (taxid:7955)]

 Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
 Identities = 53/187 (28%), Positives = 70/187 (37%)

Query:   188 PLNHTAAFPPLPLVPRIQ-TNPSPV-NPTIVSPSQVPI---PASFPVLSPAPGPEGLHGY 242
             P   T    P   VP    T+P    +PT   P++ PI   PA  P  SP P  + +   
Sbjct:   263 PKKQTITVDPTSPVPAEDPTSPGLAEDPTSPGPAEDPISPVPAEDPT-SPGPAEDPISP- 320

Query:   243 TPAESPEGHVVLTGKPIKHKKAKQDTDRTSSSNVNDTV-PVPPLANAP-RTPTNRKNRTD 300
              PAE P   V     PI    A+  T    + +   TV P  P    P   PT+     D
Sbjct:   321 VPAEDPTSPVPAED-PISPVPAEDPTSPVPAEDPTSTVAPEDPNNQTPAENPTSPAATAD 379

Query:   301 SSPVNHHTVVSPSQTIPASSSPIDSAVVVSPPALAPSRGSASLFGYFLAEPAENQDVLTL 360
               P + +    P    PA  S    A    P ++AP+ GS S      A P EN      
Sbjct:   380 --PTDQNPAEDPRNPAPAEDSR-KPAPTEDPTSMAPTEGSTS------AAPTENLTTAPT 430

Query:   361 DSPSPAP 367
             +  +P P
Sbjct:   431 EGATPVP 437

GO:0005044 "scavenger receptor activity" evidence=IEA

GO:0006955 "immune response" evidence=IEA

GO:0030247 "polysaccharide binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1P3F4 ENAH "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
 Identities = 55/188 (29%), Positives = 77/188 (40%)

Query:   187 RPLNHTAAFPPLPL-VPR-IQTNPSPVNPTIVSPSQVPIPASFPVLSPAPGPEGLHGYTP 244
             RPLN ++  PP P+  P  +  NP PV  +  +PS  P+P S PV+  +P P    G  P
Sbjct:   343 RPLNKSSR-PPSPVNAPATLPPNPKPVAWS--APSFAPLPPSPPVMISSP-PGKATGPRP 398

Query:   245 AESPEGHVVLTGKPIKHKKAKQDTDRTSSSNVNDTVPVPPLAN-APRTPTNRKNRTDSSP 303
                P    V    P+    A        S NV   VP P  +   P  P          P
Sbjct:   399 V-LP----VSASNPVAQMPASPTAPNGLSENVTYAVPSPSTSGPTPPPPPPPPPLPSFPP 453

Query:   304 VN-HHTVVSPSQTIPASSSPIDS-AVVVSPPALAPSRGSASLFGYFLAEPAENQDVLTLD 361
             ++      SPS   P +S+P    +V+ SP A  P+    SL    L + + ++ VL   
Sbjct:   454 LSLSGPQASPSPNSPNASTPSSKPSVLPSPSAATPASVENSL-NSVLGDSSASEPVLQAA 512

Query:   362 SPSPAPMT 369
             S    P T
Sbjct:   513 SQPIEPTT 520

GO:0046907 "intracellular transport" evidence=IEA

GO:0001725 "stress fiber" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0008154 "actin polymerization or depolymerization" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0030175 "filopodium" evidence=IEA

GO:0050699 "WW domain binding" evidence=IEA

TAIR|locus:2137672 ENODL2 "early nodulin-like protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
 Identities = 48/159 (30%), Positives = 69/159 (43%)

Query:   191 HTAAFPPLPLVPRIQTNP----SPVNPTIVSPSQVPIPASFPVLSPAPGPEGLHGYTPAE 246
             H AA  P    P   T P    SP + + VSP+  P P S      A  P+     +PA 
Sbjct:   141 HAAA--PGSSTPGSMTPPGGAHSPKSSSPVSPTTSP-PGSTTPPGGAHSPKSSSAVSPAT 197

Query:   247 SPEGHVV-LTGKPIKHKKAKQDTDRTSSSNVNDTVPV--PPLANAPRTPTNRKNRTDSSP 303
             SP G +   +G P+    +     +++S     + P+  PP   AP  P   K+ +   P
Sbjct:   198 SPPGSMAPKSGSPVSPTTSPPAPPKSTSPVSPSSAPMTSPP---APMAP---KSSSTIPP 251

Query:   304 VNHHTVVSPSQTIPASSSPIDSAVVVSPPALAPSRGSAS 342
              +      P    P SSSP+ ++  VSP +LAP  GS S
Sbjct:   252 SSAPMTSPPGSMAPKSSSPVSNSPTVSP-SLAPG-GSTS 288

GO:0005507 "copper ion binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009055 "electron carrier activity" evidence=IEA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

FB|FBgn0261714 Cpn "Calphotin" [Drosophila melanogaster (taxid:7227)]

 Score = 119 (46.9 bits), Expect = 0.00064, P = 0.00064
 Identities = 51/185 (27%), Positives = 76/185 (41%)

Query:   188 PLNHTAAFPPLPLVPRIQTNPSPVNPTIVSP-SQVPIPASF-P--VLSPAPGPEGLHGYT 243
             P+  +A   P+ +V      P+P  P  V+P +  P  AS  P  V  PAP P       
Sbjct:    17 PVTPSAVAAPVQVVSPAAVAPAPAAPIAVTPVAPPPTLASVQPATVTIPAPAPIAAASVA 76

Query:   244 PAESPEGHVVLTGKPIKHKKAKQDTDRTSSSNVNDTVPV-PPLANAPRTPTNRKNRTDSS 302
             P  S    VV    P             +   V  + PV PP+A    TPT       ++
Sbjct:    77 PVASVAPPVVAAPTPPAASPVSTPPVAVAQIPVAVSAPVAPPVA---ATPTPVAPIPVAA 133

Query:   303 PVNHHTVVSPSQTIPASSSPIDSAVVVSPPALAPSRGSASLFGYFLAEPAENQDVLTLDS 362
             PV     V+ S   PA+ +P+ S V+ +PP + P+  +  +     A PA    V  + +
Sbjct:   134 PVIATPPVAASAPTPAAVTPVVSPVIATPPVV-PANTTVPVAAPVAAVPAAVPVVAPVLA 192

Query:   363 PSPAP 367
             P+ AP
Sbjct:   193 PAVAP 197

GO:0005791 "rough endoplasmic reticulum" evidence=IDA

GO:0030424 "axon" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005509 "calcium ion binding" evidence=IDA

GO:0016028 "rhabdomere" evidence=IDA

GO:0051208 "sequestering of calcium ion" evidence=IC

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0044297 "cell body" evidence=IDA

GO:0042052 "rhabdomere development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.1__1665__AT1G15190.1 annotation not avaliable (233 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	391
pfam04747	517	pfam04747, DUF612, Protein of unknown function, DU	2e-04
pfam02469	123	pfam02469, Fasciclin, Fasciclin domain	7e-04
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	8e-04

>gnl|CDD|113514 pfam04747, DUF612, Protein of unknown function, DUF612

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 24/137 (17%)

Query: 206 TNPSPVNPTIVSPSQVPIPASFPVLSPAPGPEGLHGYTPAESPEGHVVLTGKPIKHKKAK 265
           + P+PV   IV    V   A+    +PAP P+     TPAE  E    +TGK  K  K K
Sbjct: 168 STPAPVEEEIV----VKKVANDRSAAPAPEPKTPTN-TPAEPAEQVQEITGKKNKKNKKK 222

Query: 266 QDTDRTSS-SNVNDTVPVPPLAN-------APRTPTNRKNRTDSSPVNHHTVVSPSQTIP 317
            +++ T++ ++V   V  P +         AP+   N+KN+  S           S+ +P
Sbjct: 223 SESEATAAPASVEQVVEQPKVVTEEPHQQAAPQEKKNKKNKRKSE----------SENVP 272

Query: 318 ASS-SPIDSAVVVSPPA 333
           A+S +P++  V  +PPA
Sbjct: 273 AASETPVEPVVETTPPA 289

This family includes several uncharacterized proteins from Caenorhabditis elegans. Length = 517

>gnl|CDD|217054 pfam02469, Fasciclin, Fasciclin domain

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 19/117 (16%)

Query: 43  GGHTLFANAIATSDLLFDLLSLP-SLTLFAPTD------PSLFAVDMTQTPPFYLSILRL 95
            G + F   +  + L+  L       T+FAPTD      P+     + +      ++L+ 
Sbjct: 1   PGFSTFVALLKAAGLVDTLNGSQGPFTVFAPTDEAFAKLPAGTLNFLLKDKEQLKNLLKY 60

Query: 96  HVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMP 152
           HV+P RL+ ++L           N   L TL  S  L V     G + V G +VV  
Sbjct: 61  HVVPGRLTSSDL----------KNGGTLATLQGS-KLRVNV-TGGTVTVNGARVVQS 105

This extracellular domain is found repeated four times in grasshopper fasciclin I as well as in proteins from mammals, sea urchins, plants, yeast and bacteria. Length = 123

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 14/105 (13%)

Query: 68  TLFAPTDPSLFAVDMTQ---TPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLP 124
           T+FAPTD +   +             ++L  HV+P RLS  +LL          N   LP
Sbjct: 1   TVFAPTDEAFQKLPPDLNSLLADKLKNLLLYHVVPGRLSSADLL----------NGGTLP 50

Query: 125 TLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGIL 169
           TL  S+      G SG + V G ++V      ++   VH +  +L
Sbjct: 51  TLAGSKLRITRSGGSGTVTVNGARIVEAD-IAATNGVVHVIDRVL 94

Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	391
COG2335	187	Secreted and surface protein containing fasciclin-	99.9
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.84
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.81
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	98.55
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	98.28

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.90  E-value=9.7e-24  Score=194.01  Aligned_cols=134  Identities=18%  Similarity=0.257  Sum_probs=115.3

Q ss_pred             CCchhHHHHHHHHH-hCChHHHHHHHHhcCchhhccCCCCeEEEccCChhhccCC------CC--CChhHHHhccccccc
Q 040959           28 IPTSDLDAVLLLLH-AGGHTLFANAIATSDLLFDLLSLPSLTLFAPTDPSLFAVD------MT--QTPPFYLSILRLHVL   98 (391)
Q Consensus        28 ~p~~ele~IietLr-s~GytsfA~AL~aAgLl~~Ll~~gpfTIFAPTDeAF~ald------L~--~n~~~L~sVLrYHVV   98 (391)
                      .......+|++... ...|+.|..++++++|.+.|.+.++||||||+|+||.++.      +.  +++..|+++|.|||+
T Consensus        42 ~~~~~~~~iV~~a~~~~~f~tl~~a~~aa~Lv~~L~~~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv  121 (187)
T COG2335          42 AVKGNRADIVESAANNPSFTTLVAALKAAGLVDTLNETGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVV  121 (187)
T ss_pred             hhccchhHHHHHHccCcchHHHHHHHHhhhhHHHhcCCCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEE
Confidence            33556788888884 5569999999999999999999999999999999999852      23  489999999999999


Q ss_pred             CCccCHHHHHhhcCCCCCCCCCCeeccccCCCeEEEEEcCCCcEEEccEEEeCCCccccCCEEEEEeCccccCCCC
Q 040959           99 PLRLSWTELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRSP  174 (391)
Q Consensus        99 PGrLs~sDL~~Li~~~~~~pnGTtLpTLL~G~~LtVT~~sgg~V~VNgVkVV~PDI~~ssNGVVHGIDgVLlP~SP  174 (391)
                      +|+++.+||...          ..+.| ++|.+|.|... +++++||++.|+.+|+.. +|||||+||.||+|+.+
T Consensus       122 ~Gk~~~~~l~~~----------~~v~t-~~G~~~~i~~~-~~~~~Vn~a~v~~~di~a-~NgvIhvID~Vl~Pp~~  184 (187)
T COG2335         122 EGKITAADLKSS----------GSVKT-VQGADLKIKVT-GGGVYVNDATVTIADINA-SNGVIHVIDKVLIPPMD  184 (187)
T ss_pred             cCcccHHHhhcc----------cccee-ecCceEEEEEc-CCcEEEeeeEEEeccEec-cCcEEEEEeeeccCCCc
Confidence            999999999754          35677 58999999984 667999999999999976 58999999999999653

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.84  E-value=1.4e-21  Score=159.90  Aligned_cols=118  Identities=24%  Similarity=0.338  Sum_probs=95.8

Q ss_pred             ChHHHHHHHHhcCchhhc-cCCCCeEEEccCChhhccCC------CCCChhHHHhcccccccCCccCHHHHHhhcCCCCC
Q 040959           44 GHTLFANAIATSDLLFDL-LSLPSLTLFAPTDPSLFAVD------MTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNN  116 (391)
Q Consensus        44 GytsfA~AL~aAgLl~~L-l~~gpfTIFAPTDeAF~ald------L~~n~~~L~sVLrYHVVPGrLs~sDL~~Li~~~~~  116 (391)
                      +|+.|+.+|+++|+...| ...+.+|||||+|+||.+..      +..+.+.+.++|+||+++|++..++|...      
T Consensus         2 ~~s~f~~~l~~~~l~~~l~~~~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~------   75 (128)
T PF02469_consen    2 DLSTFSRLLEQAGLADLLNDSDGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRNG------   75 (128)
T ss_dssp             TTHHHHHHHHHTTCHHHHGCSSSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHCH------
T ss_pred             CHHHHHHHHHHcCCHHHHhcCCCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhccc------
Confidence            689999999999999988 66799999999999997641      11256789999999999999999988542      


Q ss_pred             CCCCCeeccccCCCeEEEEEc-CCCcEEEcc-EEEeCCCccccCCEEEEEeCccccC
Q 040959          117 NNNSSRLPTLLPSRDLHVTRG-DSGALLVGG-VQVVMPGLYYSSYVAVHGLAGILTF  171 (391)
Q Consensus       117 ~pnGTtLpTLL~G~~LtVT~~-sgg~V~VNg-VkVV~PDI~~ssNGVVHGIDgVLlP  171 (391)
                         ++.++|++.|+.+.|+.. +++.++||+ ++|+..|+.. +||+||+||+||+|
T Consensus        76 ---~~~~~t~~~g~~~~v~~~~~~~~~~v~~~a~i~~~~~~~-~nG~ih~id~vL~P  128 (128)
T PF02469_consen   76 ---KQTLETLLNGQPLRVSSSPSNGTIYVNGKARIVKSDIEA-SNGVIHIIDDVLIP  128 (128)
T ss_dssp             ---HEEEEBSSTTCEEEEEEEGGTTEEEECCEEEESEEEEEE-SSEEEEEESS-TSS
T ss_pred             ---cccceeccCCCEEEEEEEecCCceEecCceEEEeCCEEe-CCEEEEEECceECc
Confidence               257888678999999985 368999999 9999999976 58999999999998

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.81  E-value=2.9e-20  Score=147.48  Aligned_cols=92  Identities=34%  Similarity=0.496  Sum_probs=77.1

Q ss_pred             EEEccCChhhccCC------CCCChhHHHhcccccccCCccCHHHHHhhcCCCCCCCCCCeeccccCCCeEEEEEcCC-C
Q 040959           68 TLFAPTDPSLFAVD------MTQTPPFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDS-G  140 (391)
Q Consensus        68 TIFAPTDeAF~ald------L~~n~~~L~sVLrYHVVPGrLs~sDL~~Li~~~~~~pnGTtLpTLL~G~~LtVT~~sg-g  140 (391)
                      |||||+|+||.+..      +..+. .++++|+||++|+++..++|..          |..++|+ .|+.|.|+...+ +
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~-~l~~ll~~Hiv~~~~~~~~l~~----------~~~~~Tl-~g~~l~v~~~~~~~   68 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADP-KLKNLLLYHVVPGRLSSADLLN----------GGTLPTL-AGSKLRVTRSGDSG   68 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCH-HHHHHHHhcEeCceEcHHHhcc----------CCccccC-CCCEEEEEEeCCCC
Confidence            89999999998852      11222 7899999999999999999843          4678886 589999999543 7


Q ss_pred             cEEEccEEEeCCCccccCCEEEEEeCccccCC
Q 040959          141 ALLVGGVQVVMPGLYYSSYVAVHGLAGILTFR  172 (391)
Q Consensus       141 ~V~VNgVkVV~PDI~~ssNGVVHGIDgVLlP~  172 (391)
                      .++||+++|+.+|+.. +|||||+||+||+|.
T Consensus        69 ~i~in~~~v~~~di~~-~nGvih~Id~vL~P~   99 (99)
T smart00554       69 TVTVNGARIVEADIAA-TNGVVHVIDRVLLPP   99 (99)
T ss_pred             eEEEcceEEEECCEec-CCeEEEEECceeCCC
Confidence            8999999999999987 489999999999984

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=98.55  E-value=9.9e-08  Score=102.39  Aligned_cols=138  Identities=18%  Similarity=0.193  Sum_probs=99.7

Q ss_pred             HHHHHHHHHhCChHHHHHHHHhcCchhhccCCCCeEEEccCChhhccCCCCCChhHHHhcccccccCCccCHHHHHhhcC
Q 040959           33 LDAVLLLLHAGGHTLFANAIATSDLLFDLLSLPSLTLFAPTDPSLFAVDMTQTPPFYLSILRLHVLPLRLSWTELLQLIS  112 (391)
Q Consensus        33 le~IietLrs~GytsfA~AL~aAgLl~~Ll~~gpfTIFAPTDeAF~aldL~~n~~~L~sVLrYHVVPGrLs~sDL~~Li~  112 (391)
                      .....+..++...+++...+...+++.-|...+.+|+|+|+|++|..++...-...+..+|.||++|-++..+++.+.  
T Consensus       373 ~~~l~~La~e~~~st~~rlv~elgll~~L~~n~e~t~~lp~n~~fd~~~~~~~r~l~~qIL~~HII~~~~~~~~~y~~--  450 (682)
T KOG1437|consen  373 LKNLMSLAREDEISTSMRLVAELGLLTALAPNDEATLLLPTNNLFDDLTPLESRRLAEQILYNHIIPEYLTSSSMYNG--  450 (682)
T ss_pred             HHHHHHHHhcccccHHHHHHHhccceEEEcCCCceEEeeehhhhccCCChhhhHHHHHHHHHHhCcchhhhhhhhhcc--
Confidence            556677788888889999998889888776555599999999999985432222336789999999999999876432  


Q ss_pred             CCCCCCCCCeeccccCCCeEEE--EEcCC----CcEEEcc-EEEeCCCccccCCEEEEEeCccccCCCCCCCCCCC
Q 040959          113 PSNNNNNSSRLPTLLPSRDLHV--TRGDS----GALLVGG-VQVVMPGLYYSSYVAVHGLAGILTFRSPIHNNHSN  181 (391)
Q Consensus       113 ~~~~~pnGTtLpTLL~G~~LtV--T~~sg----g~V~VNg-VkVV~PDI~~ssNGVVHGIDgVLlP~SP~~~~~~~  181 (391)
                             ++.++|+ .|..+.+  .+..+    ..+.++| +.|++.|+.. +||+||.||+||.|.++.+.+.+.
T Consensus       451 -------~~~v~t~-g~~~l~~fv~r~~~s~~~t~i~~~~~~~Ii~aDi~~-~nGvvH~id~vl~p~~l~~~l~~d  517 (682)
T KOG1437|consen  451 -------QTTVRTL-GKNKLLYFVYRHSVSANVTDILIGNEACIIEADISV-KNGVVHIIDRVLDPVSLMEDLKTD  517 (682)
T ss_pred             -------cceeecc-CCeEEEEEEecccccccceeeeccceeeEEecccce-ecCceEEeeEEcCcccHHHHHhhc
Confidence                   3377774 4543333  22111    2355555 5788999976 589999999999997776665554

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=98.28  E-value=1.7e-06  Score=93.21  Aligned_cols=127  Identities=17%  Similarity=0.051  Sum_probs=83.8

Q ss_pred             HHHHHh-CChHHHHHHHHhcCchhhccCCCCeEEEccCChhhccCCCC----CChhHHHhcccccccCCccCHHHHHhhc
Q 040959           37 LLLLHA-GGHTLFANAIATSDLLFDLLSLPSLTLFAPTDPSLFAVDMT----QTPPFYLSILRLHVLPLRLSWTELLQLI  111 (391)
Q Consensus        37 ietLrs-~GytsfA~AL~aAgLl~~Ll~~gpfTIFAPTDeAF~aldL~----~n~~~L~sVLrYHVVPGrLs~sDL~~Li  111 (391)
                      .+.|++ ..++.+..+++.+++-+++...+.+|+|+|+|+|+.+....    .+...|..+|.||++++.... ++... 
T Consensus       511 ~~~l~~d~r~s~~~~~le~~~l~e~l~~~~~~t~fvPt~ka~~~~~~~~~~~~~~~~l~~~l~yH~v~~~~~l-s~~~~-  588 (682)
T KOG1437|consen  511 MEDLKTDGRISGTVQGLEGVLLPEELTPEGNYTLFVPTNKAWQKSTKDEKSLFHKKALQDFLKYHLVPGQSRL-SLGSS-  588 (682)
T ss_pred             HHHHhhccchhhhHHhhhhcCChhhhccCCceEEEeecccccccCCcchhhcchHHHHHHHHHhccccceeee-ecccc-
Confidence            344443 44666666777778877776779999999999999884322    367889999999999998861 11110 


Q ss_pred             CCCCCCCCCCeeccccCCCeEEEEEcCCCcEEEccEEEeCCCccccCCEEEEEeCccccCC
Q 040959          112 SPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTFR  172 (391)
Q Consensus       112 ~~~~~~pnGTtLpTLL~G~~LtVT~~sgg~V~VNgVkVV~PDI~~ssNGVVHGIDgVLlP~  172 (391)
                       +.  ...+ ...+ ..|..+.+... .....+|-.+++..|++. .|||+|.||.||.|.
T Consensus       589 -~~--v~~~-~k~s-~~~~~~~~~~~-~~~~~vn~e~~~~~~i~~-~n~~~h~i~~vl~p~  642 (682)
T KOG1437|consen  589 -PY--VMIQ-VKLS-LRGDHLFFSLV-NPRGDVNKERLVGIDIMG-TNGVVHVIDLVLKPP  642 (682)
T ss_pred             -cc--eeee-eeEE-EecccEEeeee-ccccceeeeeeeccceee-ecceeEEEEEEcccC
Confidence             00  0000 1112 12333333331 345667888999999975 589999999999994

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	391
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
2vxp_A	132	Transforming growth factor-beta-induced protein IG	6e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 3e-04
 Identities = 44/336 (13%), Positives = 89/336 (26%), Gaps = 90/336 (26%)

Query: 50  NAIATSDLLFDLLSLPSLTLFAPTDPSLFAVDMTQTP-PFYLSILRLHVLPLRLSWTELL 108
           +A++ +  LF  L      +        F  ++ +    F +S   +     + S    +
Sbjct: 59  DAVSGTLRLFWTLLSKQEEMVQ-----KFVEEVLRINYKFLMS--PIKTEQRQPSMMTRM 111

Query: 109 QLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAG- 167
             I   +   N ++          +V+R      L   +  + P       V + G+ G 
Sbjct: 112 -YIEQRDRLYNDNQ-----VFAKYNVSRLQPYLKLRQALLELRPA----KNVLIDGVLGS 161

Query: 168 ------ILTFRS-PIHNNHSNGNVWFRPLNHTAAFPPLPLVPRIQTNPSPVNPTIVSPSQ 220
                 +    S  +         W   LN      P  ++  +Q     ++P   S S 
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIFW---LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218

Query: 221 VPIPASFPV----------LSPAPGPEGLHGYTPAESPEGHVVLTGKPIKHKKAKQDTD- 269
                   +          L   P    L            +VL    +++ KA    + 
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCL------------LVLLN--VQNAKAWNAFNL 264

Query: 270 --R----TSSSNVNDTVPVPPLANAPRTPTNRKNRTDSSPVNHHTVVSPSQT-------- 315
             +    T    V D +                  T  S  +H   ++P +         
Sbjct: 265 SCKILLTTRFKQVTDFLSA-------------ATTTHISLDHHSMTLTPDEVKSLLLKYL 311

Query: 316 -IPASSSPIDSAVVVSPPALAPSRGSASLFGYFLAE 350
                  P    +  +P  L       S+    + +
Sbjct: 312 DCRPQDLP-REVLTTNPRRL-------SIIAESIRD 339

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A Length = 132

 Score = 38.4 bits (90), Expect = 6e-04
 Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 18/121 (14%)

Query: 38  LLLHAGGHTLFANAIATSDLLFDLLSLPSLTLFAPTD------PSLFAVDMTQTPPFYLS 91
           +L      ++   AI ++ L   L      T+FAPT+      P      +        +
Sbjct: 7   VLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELAN 66

Query: 92  ILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVM 151
           IL+ H+    L    +              RL +L     L V+  +   + V    V  
Sbjct: 67  ILKYHIGDEILVSGGIG----------ALVRLKSLQ-GDKLEVSLKN-NVVSVNKEPVAE 114

Query: 152 P 152
           P
Sbjct: 115 P 115

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	391
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.92
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.92
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.91
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.81
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.78

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.92  E-value=7.4e-27  Score=197.36  Aligned_cols=125  Identities=25%  Similarity=0.314  Sum_probs=106.3

Q ss_pred             HHHHHHHh-CChHHHHHHHHhcCchhhccCCCCeEEEccCChhhccCC------CCC--ChhHHHhcccccccCCccCHH
Q 040959           35 AVLLLLHA-GGHTLFANAIATSDLLFDLLSLPSLTLFAPTDPSLFAVD------MTQ--TPPFYLSILRLHVLPLRLSWT  105 (391)
Q Consensus        35 ~IietLrs-~GytsfA~AL~aAgLl~~Ll~~gpfTIFAPTDeAF~ald------L~~--n~~~L~sVLrYHVVPGrLs~s  105 (391)
                      ++++.|++ .+|+.|+.+|+++||.+.|...+++|||||+|+||.++.      +..  +.+.|+++|+|||+||++..+
T Consensus         4 ~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~~~   83 (137)
T 1w7d_A            4 DIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSS   83 (137)
T ss_dssp             TTGGGGGSCSSSTTTTHHHHHTTTHHHHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCCTT
T ss_pred             CHHHHHHhCCCHHHHHHHHHHcCCHHHHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEcHH
Confidence            45677764 679999999999999998988899999999999999852      222  678899999999999999988


Q ss_pred             HHHhhcCCCCCCCCCCeeccccCCCeEEEEEcCCCcEEEccEEEeCCCccccCCEEEEEeCccccCCC
Q 040959          106 ELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRS  173 (391)
Q Consensus       106 DL~~Li~~~~~~pnGTtLpTLL~G~~LtVT~~sgg~V~VNgVkVV~PDI~~ssNGVVHGIDgVLlP~S  173 (391)
                      +|          ..|..++|+ .|+.|.|+.. ++ ++|||++|+.+|+.. +|||||+||+||+|.+
T Consensus        84 ~l----------~~~~~~~tl-~G~~l~v~~~-~g-v~vn~a~v~~~di~~-~NGvIHvID~VL~P~s  137 (137)
T 1w7d_A           84 DL----------TEGMTAETV-EGGALTVTLE-GG-PKVNGVSISQPDVDA-SNGVIHVIDGVLMPGA  137 (137)
T ss_dssp             TS----------CSSEEEECT-TSCEEEEECT-TS-CEETTEECSBCCCBC-SSSEEEBCSSCCSSCC
T ss_pred             Hh----------cCCCeeecc-CCceEEEEec-CC-EEEeCcEEEECCeec-CCeEEEEECeeeCCCC
Confidence            76          335678884 7899999984 66 999999999999976 5899999999999964

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.92  E-value=6.8e-26  Score=190.39  Aligned_cols=123  Identities=22%  Similarity=0.260  Sum_probs=104.5

Q ss_pred             HHHHHHHh-CChHHHHHHHHhcCchhhccCCCCeEEEccCChhhccCC------CCCChhHHHhcccccccCCccCHHHH
Q 040959           35 AVLLLLHA-GGHTLFANAIATSDLLFDLLSLPSLTLFAPTDPSLFAVD------MTQTPPFYLSILRLHVLPLRLSWTEL  107 (391)
Q Consensus        35 ~IietLrs-~GytsfA~AL~aAgLl~~Ll~~gpfTIFAPTDeAF~ald------L~~n~~~L~sVLrYHVVPGrLs~sDL  107 (391)
                      ++++.|++ .+|+.|+.+|+++||.+.|...+++|||||+|+||.++.      +..+.+.|+++|+|||+|+.+..++|
T Consensus         3 ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~l   82 (132)
T 2vxp_A            3 TVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGGI   82 (132)
T ss_dssp             CHHHHHTTSTTCHHHHHHHHHHTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTTC
T ss_pred             cHHHHHHcCCCHHHHHHHHHHcCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhhc
Confidence            46788875 679999999999999988888899999999999998852      12478899999999999999887665


Q ss_pred             HhhcCCCCCCCCCCeeccccCCCeEEEEEcCCCcEEEccEEEeCCCccccCCEEEEEeCcccc
Q 040959          108 LQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILT  170 (391)
Q Consensus       108 ~~Li~~~~~~pnGTtLpTLL~G~~LtVT~~sgg~V~VNgVkVV~PDI~~ssNGVVHGIDgVLl  170 (391)
                                ..+..++|+ .|+.|.|+.. ++.++||+++|+.+|+.. +|||||+||+||+
T Consensus        83 ----------~~~~~~~tl-~G~~l~v~~~-~~~v~vn~a~v~~~di~a-~NGvIHvID~VLl  132 (132)
T 2vxp_A           83 ----------GALVRLKSL-QGDKLEVSLK-NNVVSVNKEPVAEPDIMA-TNGVVHVITNVLQ  132 (132)
T ss_dssp             ----------SSCEEEEBT-TSSEEEEEEE-TTEEEESSCBEEEEEEEE-TTEEEEEESSCC-
T ss_pred             ----------cCCceEecC-CCCEEEEEEe-CCEEEEeccEEEEcceec-CCEEEEEECcEeC
Confidence                      335678885 7899999984 788999999999999986 5899999999985

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.91  E-value=2.9e-25  Score=194.13  Aligned_cols=139  Identities=24%  Similarity=0.287  Sum_probs=113.7

Q ss_pred             hhcCCCCCCCCchhHHHHHHHHHh-CChHHHHHHHH-----hcCchhhccCCCCeEEEccCChhhccCC------CCCCh
Q 040959           19 LCFPTTPAGIPTSDLDAVLLLLHA-GGHTLFANAIA-----TSDLLFDLLSLPSLTLFAPTDPSLFAVD------MTQTP   86 (391)
Q Consensus        19 ~~~~stsas~p~~ele~IietLrs-~GytsfA~AL~-----aAgLl~~Ll~~gpfTIFAPTDeAF~ald------L~~n~   86 (391)
                      -|.++-+.+.....-.++.+.|++ .+|+.|+.+|+     ++||.+.|...+ +|||||+|+||.++.      +..++
T Consensus        13 ~~~~~~pg~~~g~~~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~   91 (163)
T 1nyo_A           13 AANPTGPASVQGMSQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNS   91 (163)
T ss_dssp             HHCSSSTTSTTHHHHSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCS
T ss_pred             cCCCCCCCCCCCCCCcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCH
Confidence            354444444444455678888875 56999999999     999998888878 999999999998852      22367


Q ss_pred             hHHHhcccccccCCccCHHHHHhhcCCCCCCCCCCeeccccCCCeEEEEEcCCCcEEEccEEEeCCCccccCCEEEEEeC
Q 040959           87 PFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLA  166 (391)
Q Consensus        87 ~~L~sVLrYHVVPGrLs~sDL~~Li~~~~~~pnGTtLpTLL~G~~LtVT~~sgg~V~VNgVkVV~PDI~~ssNGVVHGID  166 (391)
                      +.|+++|+|||++|++..++|.           | .++|+ .|+.|.|+. .++.++||+++|+.+|+.. +|||||+||
T Consensus        92 ~~L~~iL~yHvv~g~~~~~~l~-----------g-~~~Tl-~G~~l~v~~-~~~~v~vn~a~V~~~di~a-~NGvIHvID  156 (163)
T 1nyo_A           92 SLLTSILTYHVVAGQTSPANVV-----------G-TRQTL-QGASVTVTG-QGNSLKVGNADVVCGGVST-ANATVYMID  156 (163)
T ss_dssp             SHHHHHHHHTEEESCCCTTTSC-----------E-EEECT-TSSEEEEEE-CSSCEEETTEECSSBCCCC-SSEEEBCBS
T ss_pred             HHHHHHHHhceECCEEcHHHhC-----------C-ccccC-CCCEEEEEE-ECCEEEEeccEEEECceEc-CCEEEEEEC
Confidence            8899999999999999998762           2 57885 799999998 4778999999999999976 589999999


Q ss_pred             ccccCCC
Q 040959          167 GILTFRS  173 (391)
Q Consensus       167 gVLlP~S  173 (391)
                      +||+|.+
T Consensus       157 ~VL~P~~  163 (163)
T 1nyo_A          157 SVLMPPA  163 (163)
T ss_dssp             SCCCCCC
T ss_pred             cEeCCCC
Confidence            9999964

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.81  E-value=1.8e-20  Score=176.57  Aligned_cols=123  Identities=22%  Similarity=0.285  Sum_probs=99.3

Q ss_pred             hCChHHHHHHHHhcC--chhhccCCCCeEEEccCChhhccCCC---CCChhHHHhcccccccCCccCHHHHHhhcCCCCC
Q 040959           42 AGGHTLFANAIATSD--LLFDLLSLPSLTLFAPTDPSLFAVDM---TQTPPFYLSILRLHVLPLRLSWTELLQLISPSNN  116 (391)
Q Consensus        42 s~GytsfA~AL~aAg--Ll~~Ll~~gpfTIFAPTDeAF~aldL---~~n~~~L~sVLrYHVVPGrLs~sDL~~Li~~~~~  116 (391)
                      ...|+.|+.+|+++|  |.+.|...++||||||+|+||.+..+   ..+.+.|+++|+|||++|++..++|...      
T Consensus        21 ~~~~s~~~~~l~~ag~~l~~~L~~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~~~~~~l~~~------   94 (324)
T 1o70_A           21 NGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQK------   94 (324)
T ss_dssp             HHHHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHH------
T ss_pred             CCcHHHHHHHHHHHhHHHHHHHcCCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCeecHHHHhhc------
Confidence            456999999999999  88888888999999999999987532   2478899999999999999999999876      


Q ss_pred             CC-CCC-eeccccCCCe-EEEEEcC---CCcEEEcc----EEEeCCCccccCCEEEEEeCccccCCC
Q 040959          117 NN-NSS-RLPTLLPSRD-LHVTRGD---SGALLVGG----VQVVMPGLYYSSYVAVHGLAGILTFRS  173 (391)
Q Consensus       117 ~p-nGT-tLpTLL~G~~-LtVT~~s---gg~V~VNg----VkVV~PDI~~ssNGVVHGIDgVLlP~S  173 (391)
                       . +|. .++|+. |.. +.+....   +..+++||    ++|+.+|+.. +|||||+||+||.|..
T Consensus        95 -~~~~~~~~~Tl~-g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~-~NGvIhvID~VL~pp~  158 (324)
T 1o70_A           95 -NANLIAQVPTVN-NNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQ-TNGYVHIIDHVLGVPY  158 (324)
T ss_dssp             -TSSSCCCEEBSS-TTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEEC-SSEEEEEESSCTTSCC
T ss_pred             -cCCCceEEEcCC-CCceEEEEEeecCCceEEEEcCCceeEEEEeccccc-cCcEEEEEchhhhhch
Confidence             2 122 678864 554 5554321   24588985    9999999986 5899999999999954

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.78  E-value=6.9e-20  Score=172.53  Aligned_cols=133  Identities=18%  Similarity=0.140  Sum_probs=103.3

Q ss_pred             HHHHHHh-CChHHHHHHHHhcCchhhcc-CCCCeEEEccCChhhccCC----------CCCCh-hHHHhcccccccCC--
Q 040959           36 VLLLLHA-GGHTLFANAIATSDLLFDLL-SLPSLTLFAPTDPSLFAVD----------MTQTP-PFYLSILRLHVLPL--  100 (391)
Q Consensus        36 IietLrs-~GytsfA~AL~aAgLl~~Ll-~~gpfTIFAPTDeAF~ald----------L~~n~-~~L~sVLrYHVVPG--  100 (391)
                      +.+.|++ ..|+.|..+++.+|+.+.|. ..+++|||||+|+||.++.          +..+. +.|+++|+|||+|+  
T Consensus       161 i~~~l~~~~~fs~~~~~l~~~gl~~~L~~~~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~~~~~~~l~~iL~yHvv~~~~  240 (324)
T 1o70_A          161 VLGKLESDPMMSDTYKMGKFSHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDK  240 (324)
T ss_dssp             HHHHHHHCGGGHHHHHHTTTTTTTGGGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESS
T ss_pred             HHHHhhcCchHHHHHHHHHhhCHHHHhCCCCCCeEEEEeChHHHHhhhhhchhHHHHHhccCcHHHHHHHHHhcEeCCcc
Confidence            5666765 46999999999999988887 4789999999999998741          12222 48999999999999  


Q ss_pred             ccCHHHHHhhcCCCCCCCCCC-eeccccCCCeEEEEEc-CCCcEEEc----cEEEeCCCccccCCEEEEEeCccccCCCC
Q 040959          101 RLSWTELLQLISPSNNNNNSS-RLPTLLPSRDLHVTRG-DSGALLVG----GVQVVMPGLYYSSYVAVHGLAGILTFRSP  174 (391)
Q Consensus       101 rLs~sDL~~Li~~~~~~pnGT-tLpTLL~G~~LtVT~~-sgg~V~VN----gVkVV~PDI~~ssNGVVHGIDgVLlP~SP  174 (391)
                      .++.++|.+.-.     +.+. .++|+.  +.|.|+.. .++.++||    +++|+.+|+.+ .|||||+||+||+|.+-
T Consensus       241 ~~~~~~l~~~~~-----~~~~~~~~Tl~--~~l~v~~~~~~~~v~v~~~~~~a~v~~~di~~-~NGvIHvID~VL~P~~~  312 (324)
T 1o70_A          241 EYTMKDLVKFSQ-----ESGSVILPTFR--DSLSIRVEEEAGRYVIIWNYKKINVYRPDVEC-TNGIIHVIDYPLLEEKD  312 (324)
T ss_dssp             CCCHHHHHHHHH-----HSSSEEEECSS--SEEEEEEEEETTEEEEEETTEEEEEEEEEEEE-TTEEEEEESSCSCCTTT
T ss_pred             eEcHHHHhhhcc-----CCCeeeeeccC--CcEEEEEEecCCEEEEEecCceeEEEEccccc-CCCeEEEeceeecCCcc
Confidence            888899986500     1112 378864  57888652 36789998    89999999986 58999999999999875


Q ss_pred             CC
Q 040959          175 IH  176 (391)
Q Consensus       175 ~~  176 (391)
                      .+
T Consensus       313 ~~  314 (324)
T 1o70_A          313 VV  314 (324)
T ss_dssp             TC
T ss_pred             cc
Confidence            54

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	391
d1o70a1	140	b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Dros	3e-04

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 140

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 10/103 (9%)

Query: 43  GGHTLFANAIATS--DLLFDLLSLPSLTLFAPTD---PSLFAVDMTQTPPFYLSILRLHV 97
           G    F   I  +   +L D+ SL  +T+ AP++    S    ++ +       IL +H+
Sbjct: 4   GALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHI 63

Query: 98  LPLRLSWTELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSG 140
           +  RL+  ++        N N  +++PT+  +  L+      G
Sbjct: 64  IKDRLNVDKIR-----QKNANLIAQVPTVNNNTFLYFNVRGEG 101

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	391
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.89
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.81
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.77

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=2.6e-24  Score=188.13  Aligned_cols=122  Identities=24%  Similarity=0.275  Sum_probs=100.9

Q ss_pred             HHHHHHh-CChHHHHHHHHh-----cCchhhccCCCCeEEEccCChhhccCC------CCCChhHHHhcccccccCCccC
Q 040959           36 VLLLLHA-GGHTLFANAIAT-----SDLLFDLLSLPSLTLFAPTDPSLFAVD------MTQTPPFYLSILRLHVLPLRLS  103 (391)
Q Consensus        36 IietLrs-~GytsfA~AL~a-----AgLl~~Ll~~gpfTIFAPTDeAF~ald------L~~n~~~L~sVLrYHVVPGrLs  103 (391)
                      +...+++ -.|++|..||++     +||.+.|.+ ++||||||+|+||.++.      +..+++.|+++|+|||++|++.
T Consensus        30 v~~~a~~~p~lstl~~Al~a~~~~~a~L~~~L~~-gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yHVv~g~~~  108 (163)
T d1nyoa_          30 VAVAASNNPELTTLTAALSGQLNPQVNLVDTLNS-GQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTS  108 (163)
T ss_dssp             HHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTS-SSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESCCC
T ss_pred             HHHHHhcCCchHHHHHHHhhccccccchhHhhcC-CCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhhhhhhhhh
Confidence            3444443 349999999984     788888875 89999999999998852      3356788999999999999999


Q ss_pred             HHHHHhhcCCCCCCCCCCeeccccCCCeEEEEEcCCCcEEEccEEEeCCCccccCCEEEEEeCccccCCC
Q 040959          104 WTELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRS  173 (391)
Q Consensus       104 ~sDL~~Li~~~~~~pnGTtLpTLL~G~~LtVT~~sgg~V~VNgVkVV~PDI~~ssNGVVHGIDgVLlP~S  173 (391)
                      .+++..            .++| +.|..|.|+. .++.++||+++|+.+|+.. +|||||+||+||+|++
T Consensus       109 ~~~l~~------------~~~T-l~G~~l~v~~-~~~~i~v~~a~Vv~~di~a-~NGvIHvID~VLlPPa  163 (163)
T d1nyoa_         109 PANVVG------------TRQT-LQGASVTVTG-QGNSLKVGNADVVCGGVST-ANATVYMIDSVLMPPA  163 (163)
T ss_dssp             TTTSCE------------EEEC-TTSSEEEEEE-CSSCEEETTEECSSBCCCC-SSEEEBCBSSCCCCCC
T ss_pred             hhhhhh------------hhhh-ccCcceeEEe-cCCEEEEeceEEEECCeec-CCcEEEEECccccCCC
Confidence            987632            3566 5799999998 4789999999999999986 5899999999999964

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.81  E-value=1.6e-20  Score=153.69  Aligned_cols=125  Identities=20%  Similarity=0.232  Sum_probs=92.9

Q ss_pred             hCChHHHHHHHHhcC--chhhccCCCCeEEEccCChhhccCCC---CCChhHHHhcccccccCCccCHHHHHhhcCCCCC
Q 040959           42 AGGHTLFANAIATSD--LLFDLLSLPSLTLFAPTDPSLFAVDM---TQTPPFYLSILRLHVLPLRLSWTELLQLISPSNN  116 (391)
Q Consensus        42 s~GytsfA~AL~aAg--Ll~~Ll~~gpfTIFAPTDeAF~aldL---~~n~~~L~sVLrYHVVPGrLs~sDL~~Li~~~~~  116 (391)
                      +.+|+.|..+|+.+|  +.+.|...+++|||||+|+||.+...   ..+.+.|+++|+|||+||++..++|.....    
T Consensus         3 ~~~~~~f~~~i~~~g~~~~~~l~~~~~~TvFAPtn~Af~~~~~~~~~~~~~~l~~~l~yHiv~~~~~~~~l~~~~~----   78 (140)
T d1o70a1           3 NGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNA----   78 (140)
T ss_dssp             HHHHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTS----
T ss_pred             CccHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHhcCChhhhcCCHHHHHHHHHhhccCCeEEHHHHhcCcc----
Confidence            346889999998876  56677777899999999999987432   246788999999999999999999987611    


Q ss_pred             CCCCCeeccccCCCeEEEEEcCC---CcEEE----ccEEEeCCCccccCCEEEEEeCccccCC
Q 040959          117 NNNSSRLPTLLPSRDLHVTRGDS---GALLV----GGVQVVMPGLYYSSYVAVHGLAGILTFR  172 (391)
Q Consensus       117 ~pnGTtLpTLL~G~~LtVT~~sg---g~V~V----NgVkVV~PDI~~ssNGVVHGIDgVLlP~  172 (391)
                       .....++|+..+....+....+   ..+.+    +.++|+.+|+.. .|||||+||+||.|+
T Consensus        79 -~~~~~~~t~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~~-~NGvIH~ID~VL~~P  139 (140)
T d1o70a1          79 -NLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQ-TNGYVHIIDHVLGVP  139 (140)
T ss_dssp             -SSCCCEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEEC-SSEEEEEESSCTTSC
T ss_pred             -cCceEeeecCCCceEEEEEeccceeEEEEecCCcceEEEEeCCEec-CCeEEEEECCccCCc
Confidence             2234577865444443333211   22444    448999999986 589999999999983

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.77  E-value=4.4e-20  Score=154.46  Aligned_cols=130  Identities=18%  Similarity=0.148  Sum_probs=91.7

Q ss_pred             HHHHHHh-CChHHHHHHHHhcCchhhccC-CCCeEEEccCChhhccCC----------C-CCChhHHHhcccccccCCcc
Q 040959           36 VLLLLHA-GGHTLFANAIATSDLLFDLLS-LPSLTLFAPTDPSLFAVD----------M-TQTPPFYLSILRLHVLPLRL  102 (391)
Q Consensus        36 IietLrs-~GytsfA~AL~aAgLl~~Ll~-~gpfTIFAPTDeAF~ald----------L-~~n~~~L~sVLrYHVVPGrL  102 (391)
                      +.+.|++ ..|+.|..+++.+|+...|.+ .+++|||||+|+||.++.          + ..+.+.|+++|+|||+||+.
T Consensus         3 i~~~l~~~p~ls~~~~~~~~s~l~~~L~~~~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~g~~   82 (157)
T d1o70a2           3 VLGKLESDPMMSDTYKMGKFSHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDK   82 (157)
T ss_dssp             HHHHHHHCGGGHHHHHHTTTTTTTGGGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESS
T ss_pred             HHHHHHhCccHHHHHHHHHhCCHHHHHhCCCCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEecccc
Confidence            5677765 569999999999999888875 478999999999998731          1 12467789999999999987


Q ss_pred             CHHHH--HhhcCCCCCCCCCCeeccccCCC-eEEEEEcCCCcEEE----ccEEEeCCCccccCCEEEEEeCccccCC
Q 040959          103 SWTEL--LQLISPSNNNNNSSRLPTLLPSR-DLHVTRGDSGALLV----GGVQVVMPGLYYSSYVAVHGLAGILTFR  172 (391)
Q Consensus       103 s~sDL--~~Li~~~~~~pnGTtLpTLL~G~-~LtVT~~sgg~V~V----NgVkVV~PDI~~ssNGVVHGIDgVLlP~  172 (391)
                      .+.+.  ......    ..+...+|+ .|. .+.+.. .++.+.+    |+++|+.+|+.+ .|||||+||+||+|.
T Consensus        83 ~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~a~V~~~Di~a-~NGviHvID~VLlp~  152 (157)
T d1o70a2          83 EYTMKDLVKFSQE----SGSVILPTF-RDSLSIRVEE-EAGRYVIIWNYKKINVYRPDVEC-TNGIIHVIDYPLLEE  152 (157)
T ss_dssp             CCCHHHHHHHHHH----SSSEEEECS-SSEEEEEEEE-ETTEEEEEETTEEEEEEEEEEEE-TTEEEEEESSCSCCT
T ss_pred             cchhhhhhhhhcc----CCceeEEec-CCcEEEEEEc-CCcEEEEecCCccceEEECCEec-CCeEEEEECceecCC
Confidence            54432  221000    223334453 343 334444 3455544    679999999986 589999999999994