Citrus Sinensis ID: 041044

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70
Protein Sequence
MARTLISLMGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHcccccHHHcccccHHHHHHHHHccccHHHHHHHcEEEEHHHccHHHHHHccc
Coil and Loop (DISEMBL)
MARTLISLMGLLLLCCLAEAeylkykdpkqplhvRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI
Flexible Loop (DISEMBL)
MARTLISLMGLLLLCCLAEAEYlkykdpkqplhVRVNDLVSRMTLeekigqmtqiergvasaEVMKKYFI
Low Complexity Region (SEG)
MARTLISLMGllllcclaeaeYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI
Disordered region (IsUnstruct)
***TLISLMGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIG********************
Disordered Region (DISOPRED)
**RTLISLMGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI
Disordered Region (DISEMBL)
MARTLISLMGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI
Disordered Region (DISPRO)
*ARTLISLMGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MARTLISLMGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	70
70927645	627	endo-alpha-1,4-glucanase [Gossypium hirs	1.0	0.111	0.722	5e-23
347953914	627	b-1,4-glucanase [Gossypium trilobum]	1.0	0.111	0.722	5e-23
347953908	627	b-1,4-glucanase [Gossypium aridum]	1.0	0.111	0.722	5e-23
347953897	627	b-1,4-glucanase [Gossypium hirsutum subs	1.0	0.111	0.722	5e-23
347953885	627	b-1,4-glucanase [Gossypium tomentosum]	1.0	0.111	0.722	5e-23
347953883	627	b-1,4-glucanase [Gossypium darwinii] gi|	1.0	0.111	0.722	5e-23
347953881	627	b-1,4-glucanase [Gossypium darwinii]	1.0	0.111	0.722	5e-23
347953879	627	b-1,4-glucanase [Gossypium mustelinum] g	1.0	0.111	0.722	5e-23
347953869	627	b-1,4-glucanase [Gossypium thurberi]	1.0	0.111	0.722	5e-23
325464680	627	endo-alpha-1,4-glucanase [Gossypium raim	1.0	0.111	0.722	5e-23

>gi|70927645|gb|AAZ15705.1| endo-alpha-1,4-glucanase [Gossypium hirsutum]

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 2/72 (2%)

Query: 1  MARTLISL--MGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERG 58
          MART I++  MGL+L CCL +AEY+KYKDPKQ +HVR  DL+ RMTLEEKIGQM QIER 
Sbjct: 1  MARTRITIFFMGLVLWCCLTKAEYMKYKDPKQAVHVRTRDLLDRMTLEEKIGQMVQIERS 60

Query: 59 VASAEVMKKYFI 70
          VASA+VM KYFI
Sbjct: 61 VASADVMNKYFI 72

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|347953914|gb|AEP33582.1| b-1,4-glucanase [Gossypium trilobum]

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 2/72 (2%)

Query: 1  MARTLISL--MGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERG 58
          MART I++  MGL+L CCL +AEY+KYKDPKQ +HVR  DL+ RMTLEEKIGQM QIER 
Sbjct: 1  MARTRITIFFMGLVLWCCLTKAEYMKYKDPKQAVHVRTRDLLDRMTLEEKIGQMVQIERS 60

Query: 59 VASAEVMKKYFI 70
          VASA+VM KYFI
Sbjct: 61 VASADVMNKYFI 72

Source: Gossypium trilobum

Species: Gossypium trilobum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|347953908|gb|AEP33579.1| b-1,4-glucanase [Gossypium aridum]

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 2/72 (2%)

Query: 1  MARTLISL--MGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERG 58
          MART I++  MGL+L CCL +AEY+KYKDPKQ +HVR  DL+ RMTLEEKIGQM QIER 
Sbjct: 1  MARTRITIFFMGLVLWCCLTKAEYMKYKDPKQAVHVRTRDLLDRMTLEEKIGQMVQIERS 60

Query: 59 VASAEVMKKYFI 70
          VASA+VM KYFI
Sbjct: 61 VASADVMNKYFI 72

Source: Gossypium aridum

Species: Gossypium aridum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|347953897|gb|AEP33574.1| b-1,4-glucanase [Gossypium hirsutum subsp. latifolium]

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 2/72 (2%)

Query: 1  MARTLISL--MGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERG 58
          MART I++  MGL+L CCL +AEY+KYKDPKQ +HVR  DL+ RMTLEEKIGQM QIER 
Sbjct: 1  MARTRITIFFMGLVLWCCLTKAEYMKYKDPKQAVHVRTRDLLDRMTLEEKIGQMVQIERS 60

Query: 59 VASAEVMKKYFI 70
          VASA+VM KYFI
Sbjct: 61 VASADVMNKYFI 72

Source: Gossypium hirsutum subsp. latifolium

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|347953885|gb|AEP33568.1| b-1,4-glucanase [Gossypium tomentosum]

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 2/72 (2%)

Query: 1  MARTLISL--MGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERG 58
          MART I++  MGL+L CCL +AEY+KYKDPKQ +HVR  DL+ RMTLEEKIGQM QIER 
Sbjct: 1  MARTRITIFFMGLVLWCCLTKAEYMKYKDPKQAVHVRTRDLLDRMTLEEKIGQMVQIERS 60

Query: 59 VASAEVMKKYFI 70
          VASA+VM KYFI
Sbjct: 61 VASADVMNKYFI 72

Source: Gossypium tomentosum

Species: Gossypium tomentosum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|347953883|gb|AEP33567.1| b-1,4-glucanase [Gossypium darwinii] gi|347953912|gb|AEP33581.1| b-1,4-glucanase [Gossypium lobatum]

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 2/72 (2%)

Query: 1  MARTLISL--MGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERG 58
          MART I++  MGL+L CCL +AEY+KYKDPKQ +HVR  DL+ RMTLEEKIGQM QIER 
Sbjct: 1  MARTRITIFFMGLVLWCCLTKAEYMKYKDPKQAVHVRTRDLLDRMTLEEKIGQMVQIERS 60

Query: 59 VASAEVMKKYFI 70
          VASA+VM KYFI
Sbjct: 61 VASADVMNKYFI 72

Source: Gossypium darwinii

Species: Gossypium darwinii

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|347953881|gb|AEP33566.1| b-1,4-glucanase [Gossypium darwinii]

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 2/72 (2%)

Query: 1  MARTLISL--MGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERG 58
          MART I++  MGL+L CCL +AEY+KYKDPKQ +HVR  DL+ RMTLEEKIGQM QIER 
Sbjct: 1  MARTRITIFFMGLVLWCCLTKAEYMKYKDPKQAVHVRTRDLLDRMTLEEKIGQMVQIERS 60

Query: 59 VASAEVMKKYFI 70
          VASA+VM KYFI
Sbjct: 61 VASADVMNKYFI 72

Source: Gossypium darwinii

Species: Gossypium darwinii

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|347953879|gb|AEP33565.1| b-1,4-glucanase [Gossypium mustelinum] gi|347953895|gb|AEP33573.1| b-1,4-glucanase [Gossypium barbadense var. peruvianum]

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 2/72 (2%)

Query: 1  MARTLISL--MGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERG 58
          MART I++  MGL+L CCL +AEY+KYKDPKQ +HVR  DL+ RMTLEEKIGQM QIER 
Sbjct: 1  MARTRITIFFMGLVLWCCLTKAEYMKYKDPKQAVHVRTRDLLDRMTLEEKIGQMVQIERS 60

Query: 59 VASAEVMKKYFI 70
          VASA+VM KYFI
Sbjct: 61 VASADVMNKYFI 72

Source: Gossypium mustelinum

Species: Gossypium mustelinum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|347953869|gb|AEP33560.1| b-1,4-glucanase [Gossypium thurberi]

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 2/72 (2%)

Query: 1  MARTLISL--MGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERG 58
          MART I++  MGL+L CCL +AEY+KYKDPKQ +HVR  DL+ RMTLEEKIGQM QIER 
Sbjct: 1  MARTRITIFFMGLVLWCCLTKAEYMKYKDPKQAVHVRTRDLLDRMTLEEKIGQMVQIERS 60

Query: 59 VASAEVMKKYFI 70
          VASA+VM KYFI
Sbjct: 61 VASADVMNKYFI 72

Source: Gossypium thurberi

Species: Gossypium thurberi

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|325464680|gb|ADZ16110.1| endo-alpha-1,4-glucanase [Gossypium raimondii]

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 2/72 (2%)

Query: 1  MARTLISL--MGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERG 58
          MART I++  MGL+L CCL +AEY+KYKDPKQ +HVR  DL+ RMTLEEKIGQM QIER 
Sbjct: 1  MARTRITIFFMGLVLWCCLTKAEYMKYKDPKQAVHVRTRDLLDRMTLEEKIGQMVQIERS 60

Query: 59 VASAEVMKKYFI 70
          VASA+VM KYFI
Sbjct: 61 VASADVMNKYFI 72

Source: Gossypium raimondii

Species: Gossypium raimondii

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	70
TAIR|locus:2147117	624	AT5G20950 [Arabidopsis thalian	0.685	0.076	0.770	3.6e-14
TAIR|locus:2147102	626	AT5G20940 [Arabidopsis thalian	0.671	0.075	0.680	8.5e-12
TAIR|locus:504954860	665	AT5G04885 [Arabidopsis thalian	0.7	0.073	0.653	8.6e-11
TAIR|locus:2075636	609	AT3G47010 [Arabidopsis thalian	0.657	0.075	0.630	2.2e-08
TAIR|locus:2075621	608	AT3G47000 [Arabidopsis thalian	0.657	0.075	0.608	7.6e-08
TAIR|locus:2075571	612	AT3G47050 [Arabidopsis thalian	0.657	0.075	0.586	2.1e-07
TAIR|locus:2081605	650	AT3G62710 [Arabidopsis thalian	0.942	0.101	0.421	7.7e-07

TAIR|locus:2147117 AT5G20950 [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 3.6e-14, P = 3.6e-14
 Identities = 37/48 (77%), Positives = 42/48 (87%)

Query:    23 LKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI 70
             LKYKDPKQPL  R+ DL++RMTL+EKIGQM QIER VA+ EVMKKYFI
Sbjct:    24 LKYKDPKQPLGARIRDLMNRMTLQEKIGQMVQIERSVATPEVMKKYFI 71

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2147102 AT5G20940 [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 8.5e-12, P = 8.5e-12
 Identities = 32/47 (68%), Positives = 40/47 (85%)

Query:    24 KYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI 70
             KYKDPK+PL VR+ +L+S MTLEEKIGQM Q+ER  A+ EVM+KYF+
Sbjct:    31 KYKDPKEPLGVRIKNLMSHMTLEEKIGQMVQVERVNATTEVMQKYFV 77

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS

TAIR|locus:504954860 AT5G04885 [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 8.6e-11, P = 8.6e-11
 Identities = 32/49 (65%), Positives = 37/49 (75%)

Query:    22 YLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI 70
             YL YKDPKQ +  RV DL  RMTLEEKIGQM QI+R VA+  +M+ YFI
Sbjct:    27 YLLYKDPKQTVSDRVADLFGRMTLEEKIGQMVQIDRSVATVNIMRDYFI 75

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2075636 AT3G47010 [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query:    25 YKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI 70
             YK+   P+  RV DL+SRMTL EKIGQMTQIER VAS +V+   FI
Sbjct:    11 YKNRDAPVEARVKDLLSRMTLPEKIGQMTQIERSVASPQVITNSFI 56

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS

TAIR|locus:2075621 AT3G47000 [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 7.6e-08, P = 7.6e-08
 Identities = 28/46 (60%), Positives = 32/46 (69%)

Query:    25 YKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI 70
             YK+   P+  RV DL+SRMTL EKIGQMTQIER VAS      +FI
Sbjct:    10 YKNGDAPVEARVKDLLSRMTLPEKIGQMTQIERRVASPSAFTDFFI 55

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2075571 AT3G47050 [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 27/46 (58%), Positives = 34/46 (73%)

Query:    25 YKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI 70
             YK+ + P+  RV DL+SRMTL EKIGQMT IER VAS  V++ + I
Sbjct:    10 YKNREAPVEARVKDLLSRMTLAEKIGQMTLIERSVASEAVIRDFSI 55

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2081605 AT3G62710 [Arabidopsis thaliana (taxid:3702)]

 Score = 124 (48.7 bits), Expect = 7.7e-07, P = 7.7e-07
 Identities = 32/76 (42%), Positives = 40/76 (52%)

Query:     5 LISLMGXXXXXXXXXXXYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIER------- 57
             +I   G           Y+KYKDPK  +  RV DL+ RMTL EK+GQM QI+R       
Sbjct:    18 VILFAGRYGEATAADRGYIKYKDPKVAVEERVEDLLIRMTLPEKLGQMCQIDRFNFSQVT 77

Query:    58 -GVASA--EVMKKYFI 70
              GVA+   E+  KY I
Sbjct:    78 GGVATVVPEIFTKYMI 93


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.366    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       70        59   0.00091  102 3  10 22  0.45    27
                                                     29  0.49    27


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  456 (49 KB)
  Total size of DFA:  86 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.53u 0.12s 9.65t   Elapsed:  00:00:00
  Total cpu time:  9.53u 0.12s 9.65t   Elapsed:  00:00:00
  Start:  Thu May  9 18:31:00 2013   End:  Thu May  9 18:31:00 2013

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS

GO:0009044 "xylan 1,4-beta-xylosidase activity" evidence=TAS

GO:0009827 "plant-type cell wall modification" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00027101001 SubName- Full=Chromosome chr8 scaffold_41, whole genome shotgun sequence; (88 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	70
PRK15098	765	PRK15098, PRK15098, beta-D-glucoside glucohydrolas	1e-04

>gnl|CDD|185053 PRK15098, PRK15098, beta-D-glucoside glucohydrolase; Provisional

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 17/51 (33%), Positives = 26/51 (50%)

Query: 8  LMGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERG 58
           + L L   LA+  +  +    +     V DL+ +MTL+EKIGQ+  I  G
Sbjct: 10 AVSLALQPALADDLFGNHPLTPEARDAFVTDLLKKMTLDEKIGQLRLISVG 60

Length = 765

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	70
PLN03080	779	Probable beta-xylosidase; Provisional	98.54
PRK15098	765	beta-D-glucoside glucohydrolase; Provisional	97.76
PF00933	299	Glyco_hydro_3: Glycosyl hydrolase family 3 N termi	83.45
PF12616	75	DUF3775: Protein of unknown function (DUF3775); In	83.43

>PLN03080 Probable beta-xylosidase; Provisional

Probab=98.54  E-value=7e-08  Score=77.97  Aligned_cols=45  Identities=27%  Similarity=0.361  Sum_probs=39.0

Q ss_pred             hcccCCCCCCCCCHHHHHHHHHHhcCHHHHHhhhhc----cccCCCCHH
Q 041044           19 EAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQ----IERGVASAE   63 (70)
Q Consensus        19 ~~~~~~~~d~~ls~~~Ra~~Lv~~MTleEKi~QL~~----~~~~~~~p~   63 (70)
                      +....||||.++++++|+++||++||+|||++||.+    ++|+++.+.
T Consensus        36 ~~~~~~~~~~~~~~~~r~~~Ll~~mTleEKv~~l~~~~~~vpRlGIP~~   84 (779)
T PLN03080         36 TFSAYPFCNASLPIPARARSLVSLLTLDEKIAQLSNTAAGVPRLGIPPY   84 (779)
T ss_pred             cccCCCccCCCCCHHHHHHHHHHhcCHHHHHHHhcCCCCCCCcCCCCcc
Confidence            345578999999999999999999999999999965    677877665

>PRK15098 beta-D-glucoside glucohydrolase; Provisional

Probab=97.76  E-value=3.6e-05  Score=62.22  Aligned_cols=42  Identities=36%  Similarity=0.502  Sum_probs=32.4

Q ss_pred             CCCHHHHHHHHHHhcCHHHHHhhhhccccCCCCH-----HHHhhccC
Q 041044           29 KQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASA-----EVMKKYFI   70 (70)
Q Consensus        29 ~ls~~~Ra~~Lv~~MTleEKi~QL~~~~~~~~~p-----~~~~~y~~   70 (70)
                      +.+.++|+++++++||++||+|||+.+...+..+     +.+++|++
T Consensus        31 ~~~~~~~v~~ll~~MtleEKvgQl~~~~~~~~~~~~~~~~~i~~~~v   77 (765)
T PRK15098         31 PEARDAFVTDLLKKMTLDEKIGQLRLISVGPDNPKEAIREMIKAGQV   77 (765)
T ss_pred             CcCHHHHHHHHHHcCCHHHHHhhhcccccCCCCchHHHHHHHHhCCc
Confidence            3478999999999999999999999876544332     25677764

>PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3

Probab=83.45  E-value=0.53  Score=33.90  Aligned_cols=10  Identities=80%  Similarity=1.026  Sum_probs=8.7

Q ss_pred             CHHHHHhhhh
Q 041044           44 TLEEKIGQMT   53 (70)
Q Consensus        44 TleEKi~QL~   53 (70)
                      |+|||+|||+
T Consensus         1 TleeKigQl~   10 (299)
T PF00933_consen    1 TLEEKIGQLF   10 (299)
T ss_dssp             -HHHHHHHTE
T ss_pred             CHHHHHHHHH
Confidence            8999999998

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 3 GH3 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-xylosidase (3.2.1.37 from EC); N-acetyl beta-glucosaminidase (3.2.1.52 from EC); glucan beta-1,3-glucosidase (3.2.1.58 from EC); cellodextrinase (3.2.1.74 from EC); exo-1,3-1,4-glucanase (3.2.1 from EC). These enzymes are two-domain globular proteins that are N-glycosylated at three sites []. This domain is often N-terminal to the glycoside hydrolase family 3, C-terminal domain IPR002772 from INTERPRO.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1Y65_A 2OXN_A 3GS6_A 1TR9_A 3GSM_A 3UT0_B 3RRX_A 3USZ_A 2X42_A 2X40_A ....

>PF12616 DUF3775: Protein of unknown function (DUF3775); InterPro: IPR022254 This domain family is found in bacteria, and is approximately 80 amino acids in length

Probab=83.43  E-value=3.3  Score=25.13  Aligned_cols=36  Identities=17%  Similarity=0.224  Sum_probs=29.2

Q ss_pred             HHHHHHHHHHhcCHHHHHhhhh--ccccCCCCHHHHhh
Q 041044           32 LHVRVNDLVSRMTLEEKIGQMT--QIERGVASAEVMKK   67 (70)
Q Consensus        32 ~~~Ra~~Lv~~MTleEKi~QL~--~~~~~~~~p~~~~~   67 (70)
                      .++.+.+.++.|+.+|++....  .++|...+|++|.+
T Consensus         2 ~~~el~~~I~~l~~deqaeLvALmwiGRGd~~~eew~~   39 (75)
T PF12616_consen    2 SEEELRSFIEDLNEDEQAELVALMWIGRGDFEAEEWEE   39 (75)
T ss_pred             hHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence            4567899999999999996654  38888899998754

There is a single completely conserved residue G that may be functionally important.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	70
1lq2_A	602	Crystal Structure Of Barley Beta-D-Glucan Glucohydr		5e-11
1ex1_A	605	Beta-D-Glucan Exohydrolase From Barley Length = 605		5e-11

>pdb|1LQ2|A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole Length = 602

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 37/49 (75%)
Query: 22 YLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI 70
          Y+ YKD  +P+  RV DL+ RMTL EKIGQMTQIER VA+ +V++  FI
Sbjct: 2  YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFI 50

>pdb|1EX1|A Chain A, Beta-D-Glucan Exohydrolase From Barley Length = 605

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 37/49 (75%)
Query: 22 YLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI 70
          Y+ YKD  +P+  RV DL+ RMTL EKIGQMTQIER VA+ +V++  FI
Sbjct: 2  YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFI 50

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	70
1x38_A	602	Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai	1e-21
3rrx_A	822	EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(	4e-17
2x41_A	721	Beta-glucosidase; hydrolase, TIM barrel fold, fibr	5e-08
3bmx_A	642	Uncharacterized lipoprotein YBBD; beta-N-hexosamin	8e-07
3abz_A	845	Beta-glucosidase I; glycoside hydrolase family3 be	3e-05

>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Length = 602

 Score = 85.0 bits (211), Expect = 1e-21
 Identities = 29/50 (58%), Positives = 38/50 (76%)

Query: 21 EYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI 70
          +Y+ YKD  +P+  RV DL+ RMTL EKIGQMTQIER VA+ +V++  FI
Sbjct: 1  DYVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFI 50

>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Length = 822

 Score = 72.4 bits (178), Expect = 4e-17
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)

Query: 25 YKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI 70
           +DP   +  ++  L+++MT+E+K+ QM Q E G  + E M+KY  
Sbjct: 17 KRDP--AVEAQIEKLLAKMTIEQKVAQMIQPEIGYLTVEQMRKYGF 60

>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Length = 721

 Score = 46.5 bits (111), Expect = 5e-08
 Identities = 8/21 (38%), Positives = 17/21 (80%)

Query: 35 RVNDLVSRMTLEEKIGQMTQI 55
          +VN+++S++TLEEK+  +  +
Sbjct: 3  KVNEILSQLTLEEKVKLVVGV 23

>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Length = 642

 Score = 43.4 bits (102), Expect = 8e-07
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 1  MARTLISLMGLLLLCCLAEAEYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQM 52
          M      ++  +L                +   +  N +V+RM+L+EK+GQM
Sbjct: 1  MRPVFPLILSAVLFLSCFFGARQTEASASKR-AIDANQIVNRMSLDEKLGQM 51

>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845

 Score = 38.7 bits (90), Expect = 3e-05
 Identities = 6/20 (30%), Positives = 11/20 (55%)

Query: 34 VRVNDLVSRMTLEEKIGQMT 53
            V  L+S +  +EKI  ++
Sbjct: 4  FDVEQLLSELNQDEKISLLS 23

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	70
1x38_A	602	Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai	98.86
3rrx_A	822	EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(	98.57
3bmx_A	642	Uncharacterized lipoprotein YBBD; beta-N-hexosamin	98.18
2x41_A	721	Beta-glucosidase; hydrolase, TIM barrel fold, fibr	96.35
3zyz_A	713	Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.1	96.33
3abz_A	845	Beta-glucosidase I; glycoside hydrolase family3 be	96.09
3sql_A	535	Glycosyl hydrolase family 3; structural genomics,	91.9

>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*

Probab=98.86  E-value=1.7e-09  Score=83.38  Aligned_cols=47  Identities=60%  Similarity=0.875  Sum_probs=42.0

Q ss_pred             CCCCCCCCHHHHHHHHHHhcCHHHHHhhhhccccCCCCHHHHhhccC
Q 041044           24 KYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI   70 (70)
Q Consensus        24 ~~~d~~ls~~~Ra~~Lv~~MTleEKi~QL~~~~~~~~~p~~~~~y~~   70 (70)
                      ||+|+++++++|+++|+++||+|||++||+++.....+++.+++|++
T Consensus         4 ~~~d~~~~~~~rv~~ll~~MTleEKigQl~~~~~~~~~~~~i~~~~v   50 (602)
T 1x38_A            4 LYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFI   50 (602)
T ss_dssp             GGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTC
T ss_pred             cccCCCCCHHHHHHHHHHcCCHHHHHhhhcccccccccHHHHHhcCC
Confidence            79999999999999999999999999999987766667788888774

>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A

Probab=98.57  E-value=4.2e-08  Score=78.72  Aligned_cols=41  Identities=34%  Similarity=0.563  Sum_probs=38.0

Q ss_pred             CCHHHHHHHHHHhcCHHHHHhhhhccccCCCCHHHHhhccC
Q 041044           30 QPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI   70 (70)
Q Consensus        30 ls~~~Ra~~Lv~~MTleEKi~QL~~~~~~~~~p~~~~~y~~   70 (70)
                      .+.++||++|+++||+|||+|||++++....+++++++||+
T Consensus        20 ~~~~~rV~~ll~~MTLeEKiGQL~~~~~~~~~~~~i~~~~v   60 (822)
T 3rrx_A           20 PAVEAQIEKLLAKMTIEQKVAQMIQPEIGYLTVEQMRKYGF   60 (822)
T ss_dssp             HHHHHHHHHHHHHCCHHHHHHHHEECBTTTCCHHHHHHHCC
T ss_pred             ccHHHHHHHHHHcCCHHHHHhCccccccCCCCHHHHHhCCC
Confidence            36899999999999999999999999888889999999985

>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*

Probab=98.18  E-value=4.6e-07  Score=70.43  Aligned_cols=29  Identities=34%  Similarity=0.528  Sum_probs=25.9

Q ss_pred             CCCHHHHHHHHHHhcCHHHHHhhhhcccc
Q 041044           29 KQPLHVRVNDLVSRMTLEEKIGQMTQIER   57 (70)
Q Consensus        29 ~ls~~~Ra~~Lv~~MTleEKi~QL~~~~~   57 (70)
                      +.+.++|+++|+++||+|||+|||+++..
T Consensus        28 ~~~~~~rv~~ll~~MTleEKiGQl~~~~~   56 (642)
T 3bmx_A           28 ASKRAIDANQIVNRMSLDEKLGQMLMPDF   56 (642)
T ss_dssp             HHHHHHHHHHHHHTSCHHHHHHHTEECBC
T ss_pred             cCCHHHHHHHHHHcCCHHHHHhCceeecc
Confidence            56789999999999999999999988654

>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*

Probab=96.35  E-value=0.0013  Score=51.63  Aligned_cols=21  Identities=38%  Similarity=0.631  Sum_probs=19.7

Q ss_pred             HHHHHHHHhcCHHHHHhhhhc
Q 041044           34 VRVNDLVSRMTLEEKIGQMTQ   54 (70)
Q Consensus        34 ~Ra~~Lv~~MTleEKi~QL~~   54 (70)
                      +|+++|+++||+|||++||.+
T Consensus         2 ~r~~~ll~~mTleEK~~~l~g   22 (721)
T 2x41_A            2 EKVNEILSQLTLEEKVKLVVG   22 (721)
T ss_dssp             CHHHHHHHHCCHHHHHHHTBC
T ss_pred             hhHHHHHHcCCHHHHHHHhcC
Confidence            589999999999999999986

>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*

Probab=96.33  E-value=0.0019  Score=50.88  Aligned_cols=23  Identities=13%  Similarity=0.381  Sum_probs=21.4

Q ss_pred             HHHHHHHHHHhcCHHHHHhhhhc
Q 041044           32 LHVRVNDLVSRMTLEEKIGQMTQ   54 (70)
Q Consensus        32 ~~~Ra~~Lv~~MTleEKi~QL~~   54 (70)
                      +++|+++|+++||+|||++++.+
T Consensus        12 a~~ra~~l~~~lTl~EK~~l~~g   34 (713)
T 3zyz_A           12 AYDKAKAALAKLNLQDKVGIVSG   34 (713)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHBB
T ss_pred             HHHHHHHHHHhCCHHHHHHHhcC
Confidence            78999999999999999999964

>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*

Probab=96.09  E-value=0.0012  Score=52.93  Aligned_cols=21  Identities=29%  Similarity=0.501  Sum_probs=19.4

Q ss_pred             HHHHHHHHhcCHHHHHhhhhc
Q 041044           34 VRVNDLVSRMTLEEKIGQMTQ   54 (70)
Q Consensus        34 ~Ra~~Lv~~MTleEKi~QL~~   54 (70)
                      .|+++|+++||+|||++||.+
T Consensus         4 ~r~~~ll~~mTleEKi~~l~g   24 (845)
T 3abz_A            4 FDVEQLLSELNQDEKISLLSA   24 (845)
T ss_dssp             CCHHHHHHHCCHHHHHHHTBC
T ss_pred             HHHHHHHHcCCHHHHHHHhcC
Confidence            579999999999999999975

>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*

Probab=91.90  E-value=0.073  Score=41.05  Aligned_cols=17  Identities=24%  Similarity=0.431  Sum_probs=15.2

Q ss_pred             HhcCHHHHHhhhhcccc
Q 041044           41 SRMTLEEKIGQMTQIER   57 (70)
Q Consensus        41 ~~MTleEKi~QL~~~~~   57 (70)
                      ++||+|||+|||+.+..
T Consensus        13 ~~MtLeeKiGQL~~v~~   29 (535)
T 3sql_A           13 ESLSLRQAIAQMIVVRG   29 (535)
T ss_dssp             GGSCHHHHHHHTEEEEE
T ss_pred             CCCCHHHHhhCceEecc
Confidence            79999999999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	70
d1x38a1	388	c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-te	9e-20

>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 388

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score = 78.6 bits (192), Expect = 9e-20
 Identities = 29/50 (58%), Positives = 38/50 (76%)

Query: 21 EYLKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI 70
          +Y+ YKD  +P+  RV DL+ RMTL EKIGQMTQIER VA+ +V++  FI
Sbjct: 1  DYVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFI 50

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	70
d1x38a1	388	Beta-D-glucan exohydrolase, N-terminal domain {Bar	99.27

>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.27  E-value=1.5e-12  Score=93.03  Aligned_cols=48  Identities=58%  Similarity=0.869  Sum_probs=44.0

Q ss_pred             CCCCCCCCCHHHHHHHHHHhcCHHHHHhhhhccccCCCCHHHHhhccC
Q 041044           23 LKYKDPKQPLHVRVNDLVSRMTLEEKIGQMTQIERGVASAEVMKKYFI   70 (70)
Q Consensus        23 ~~~~d~~ls~~~Ra~~Lv~~MTleEKi~QL~~~~~~~~~p~~~~~y~~   70 (70)
                      +.|+|+++|+++||++|+++||+|||++||+++.....+++.+++|++
T Consensus         3 ~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~i   50 (388)
T d1x38a1           3 VLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFI   50 (388)
T ss_dssp             CGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTC
T ss_pred             CCcCCCCCCHHHHHHHHHHCCCHHHHHhhhcccccccCCHHHHHhccc
Confidence            459999999999999999999999999999998888888888888874