Citrus Sinensis ID: 041051
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 168 | ||||||
| 224095758 | 242 | predicted protein [Populus trichocarpa] | 0.982 | 0.681 | 0.664 | 4e-60 | |
| 255585783 | 243 | DUF26 domain-containing protein 2 precur | 0.982 | 0.679 | 0.648 | 4e-60 | |
| 224093230 | 242 | predicted protein [Populus trichocarpa] | 0.982 | 0.681 | 0.658 | 3e-59 | |
| 224132594 | 242 | predicted protein [Populus trichocarpa] | 0.982 | 0.681 | 0.664 | 7e-59 | |
| 224132966 | 214 | predicted protein [Populus trichocarpa] | 0.982 | 0.771 | 0.658 | 1e-58 | |
| 224132974 | 242 | predicted protein [Populus trichocarpa] | 0.982 | 0.681 | 0.652 | 3e-58 | |
| 224093228 | 242 | predicted protein [Populus trichocarpa] | 0.982 | 0.681 | 0.652 | 5e-58 | |
| 225447364 | 252 | PREDICTED: cysteine-rich repeat secretor | 0.976 | 0.650 | 0.626 | 4e-56 | |
| 297739322 | 266 | unnamed protein product [Vitis vinifera] | 0.976 | 0.616 | 0.626 | 5e-56 | |
| 224132606 | 245 | predicted protein [Populus trichocarpa] | 0.988 | 0.677 | 0.642 | 1e-54 |
| >gi|224095758|ref|XP_002310467.1| predicted protein [Populus trichocarpa] gi|222853370|gb|EEE90917.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/167 (66%), Positives = 131/167 (78%), Gaps = 2/167 (1%)
Query: 2 GLALCRGDVSASDCKRCVADAVSTIRKSCPYSKSAKIFYDNCMFKYSNDNFFGQIDNGTK 61
GLALCRGD S SDCK CV +A S IRK CPY+++A I+YDNC+ KYSN FFGQIDNG K
Sbjct: 78 GLALCRGDASTSDCKTCVVEAGSEIRKRCPYNEAAIIWYDNCLLKYSNKGFFGQIDNGNK 137
Query: 62 YFMWNVNNVSNRVTFNQKSKELLSRLANEASGNPKLYAAGELELNEESKKKIYGLAQCTR 121
++MWNVN VS V FN+K+KELL++LAN+A PKLYA G +EL E + K+YGL QCTR
Sbjct: 138 FYMWNVNAVSEPVPFNEKTKELLTQLANKAKATPKLYATGGMELGEST--KLYGLVQCTR 195
Query: 122 DLSYNDCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPFVKA 168
DLS CK CLD IIG+LPSCCDGK+GGRV++ SC YEIYPFV A
Sbjct: 196 DLSSAVCKKCLDGIIGELPSCCDGKEGGRVVSGSCNFRYEIYPFVNA 242
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255585783|ref|XP_002533571.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] gi|223526548|gb|EEF28806.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224093230|ref|XP_002309844.1| predicted protein [Populus trichocarpa] gi|222852747|gb|EEE90294.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224132594|ref|XP_002327834.1| predicted protein [Populus trichocarpa] gi|222837243|gb|EEE75622.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224132966|ref|XP_002327923.1| predicted protein [Populus trichocarpa] gi|222837332|gb|EEE75711.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224132974|ref|XP_002327925.1| predicted protein [Populus trichocarpa] gi|222837334|gb|EEE75713.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224093228|ref|XP_002309843.1| predicted protein [Populus trichocarpa] gi|222852746|gb|EEE90293.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225447364|ref|XP_002274745.1| PREDICTED: cysteine-rich repeat secretory protein 38-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297739322|emb|CBI28973.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224132606|ref|XP_002327837.1| predicted protein [Populus trichocarpa] gi|222837246|gb|EEE75625.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 168 | ||||||
| TAIR|locus:2095662 | 252 | AT3G22060 "AT3G22060" [Arabido | 0.976 | 0.650 | 0.532 | 1.2e-47 | |
| TAIR|locus:2085470 | 258 | AT3G58310 "AT3G58310" [Arabido | 0.958 | 0.624 | 0.455 | 1.1e-37 | |
| TAIR|locus:2095642 | 256 | AT3G21990 "AT3G21990" [Arabido | 0.946 | 0.621 | 0.426 | 2.5e-33 | |
| TAIR|locus:2065878 | 255 | AT2G31620 "AT2G31620" [Arabido | 0.958 | 0.631 | 0.430 | 3.7e-32 | |
| TAIR|locus:2830202 | 260 | AT3G21945 "AT3G21945" [Arabido | 0.946 | 0.611 | 0.405 | 2.7e-29 | |
| TAIR|locus:2115728 | 675 | CRK25 "cysteine-rich RLK (RECE | 0.964 | 0.24 | 0.427 | 3.3e-29 | |
| TAIR|locus:2166091 | 263 | AT5G48540 "AT5G48540" [Arabido | 0.970 | 0.619 | 0.379 | 3.9e-28 | |
| TAIR|locus:2095582 | 441 | AT3G21960 [Arabidopsis thalian | 0.880 | 0.335 | 0.402 | 1.3e-27 | |
| TAIR|locus:2121474 | 273 | AT4G20680 "AT4G20680" [Arabido | 0.946 | 0.582 | 0.377 | 7.3e-27 | |
| TAIR|locus:2095652 | 273 | AT3G22000 "AT3G22000" [Arabido | 0.946 | 0.582 | 0.371 | 1.9e-26 |
| TAIR|locus:2095662 AT3G22060 "AT3G22060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 90/169 (53%), Positives = 122/169 (72%)
Query: 1 NGLALCRGDVSASDCKRCVADAVSTIRKSCPYSKSAKIFYDNCMFKYSNDNFFGQIDNGT 60
NGLALCRGD S+SDC+ C+ A+ +R+ CP +K+ ++YDNC+ KYS+ NFFG+ID
Sbjct: 85 NGLALCRGDASSSDCRSCLETAIPELRQRCPNNKAGIVWYDNCLVKYSSTNFFGKIDFEN 144
Query: 61 KYFMWNVNNVSNRVTFNQKSKELLSRLANEAS--GNPKLYAAGELELNEESKKKIYGLAQ 118
+++++NV NVS+ TFN ++K LL+ L +A+ N KL+A GE + K K+YGL Q
Sbjct: 145 RFYLYNVKNVSDPSTFNSQTKALLTELTKKATTRDNQKLFATGEKNIG---KNKLYGLVQ 201
Query: 119 CTRDLSYNDCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPFVK 167
CTRDL CK CL+ IIG+LP+CCDGK+GGRV+ SC YEIYPFVK
Sbjct: 202 CTRDLKSITCKACLNGIIGELPNCCDGKEGGRVVGGSCNFRYEIYPFVK 250
|
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| TAIR|locus:2085470 AT3G58310 "AT3G58310" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095642 AT3G21990 "AT3G21990" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2065878 AT2G31620 "AT2G31620" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2830202 AT3G21945 "AT3G21945" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2166091 AT5G48540 "AT5G48540" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095582 AT3G21960 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121474 AT4G20680 "AT4G20680" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095652 AT3G22000 "AT3G22000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00070254 | hypothetical protein (243 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 168 | |||
| pfam01657 | 106 | pfam01657, Stress-antifung, Salt stress response/a | 2e-21 | |
| pfam01657 | 106 | pfam01657, Stress-antifung, Salt stress response/a | 5e-18 |
| >gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal | Back alignment and domain information |
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Score = 83.3 bits (206), Expect = 2e-21
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 68 NNVSNRVTFNQKSKELLSRLANE-ASGNPKLYAAGELELNEESKKKIYGLAQCTRDLSYN 126
N + TF LLS L++ AS + K +AAG + + +YGLAQC DLS +
Sbjct: 11 NYTTANSTFESNLNALLSSLSSNAASSSGKGFAAGT---SGAAPDTVYGLAQCRGDLSAS 67
Query: 127 DCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPF 165
DC+ CL + +L CC K+GGR+ SC + YE YPF
Sbjct: 68 DCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106
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This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106 |
| >gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 168 | |||
| PF01657 | 106 | Stress-antifung: Salt stress response/antifungal; | 99.95 | |
| PF01657 | 106 | Stress-antifung: Salt stress response/antifungal; | 99.72 |
| >PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function | Back alignment and domain information |
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Probab=99.95 E-value=7.7e-28 Score=167.18 Aligned_cols=95 Identities=43% Similarity=0.839 Sum_probs=75.7
Q ss_pred ccC-cchhhhhHHHHHHHHHHHHHhccC-CCceeeeeeecccCCcceEEEEEecCCCCChhchHHHHHHHHhhccccCCC
Q 041051 68 NNV-SNRVTFNQKSKELLSRLANEASGN-PKLYAAGELELNEESKKKIYGLAQCTRDLSYNDCKMCLDRIIGDLPSCCDG 145 (168)
Q Consensus 68 ~~~-~~~~~f~~~~~~ll~~l~~~a~~s-~~~fa~~~~~~~~~~~~~vYglaQC~~Dls~~~C~~CL~~a~~~~~~~c~~ 145 (168)
+++ +++..|.+++..||.+|+..++.+ +.+|++++.+. ++++||||+||++||++++|..||+.++.+|+++|++
T Consensus 10 ~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~---~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~ 86 (106)
T PF01657_consen 10 NNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGS---GPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPG 86 (106)
T ss_dssp B----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--S---T---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTS
T ss_pred CCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeecCC---CCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCC
Confidence 344 456669999999999999998753 47899998643 7789999999999999999999999999999999999
Q ss_pred CcceEEEcCceeEEEecCCC
Q 041051 146 KQGGRVITASCIINYEIYPF 165 (168)
Q Consensus 146 ~~g~~v~~~~C~lRy~~~~F 165 (168)
++||+|++++|+||||+++|
T Consensus 87 ~~g~~v~~~~C~lRY~~~~F 106 (106)
T PF01657_consen 87 SRGGRVWYDSCFLRYENYPF 106 (106)
T ss_dssp BSSEEEEESSEEEEEESS--
T ss_pred CceEEEECCCEEEEEECCCC
Confidence 99999999999999999998
|
The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D. |
| >PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 168 | ||||
| 3a2e_A | 108 | Crystal Structure Of Ginkbilobin-2, The Novel Antif | 3e-04 |
| >pdb|3A2E|A Chain A, Crystal Structure Of Ginkbilobin-2, The Novel Antifungal Protein From Ginkgo Biloba Seeds Length = 108 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 168 | |||
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 2e-24 | |
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 1e-16 |
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 168 | |||
| 3a2e_A | 108 | Ginkbilobin-2; domain 26 unknown function (DUF26), | 99.97 | |
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 99.97 | |
| 3a2e_A | 108 | Ginkbilobin-2; domain 26 unknown function (DUF26), | 99.8 | |
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 99.78 |
| >3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=179.58 Aligned_cols=103 Identities=24% Similarity=0.475 Sum_probs=94.3
Q ss_pred eeeecccccCcchhhhhHHHHHHHHHHHHHhccCCCceeeeeeecccCCcceEEEEEecCCCCChhchHHHHHHHHhhcc
Q 041051 61 KYFMWNVNNVSNRVTFNQKSKELLSRLANEASGNPKLYAAGELELNEESKKKIYGLAQCTRDLSYNDCKMCLDRIIGDLP 140 (168)
Q Consensus 61 ~~~~~~~~~~~~~~~f~~~~~~ll~~l~~~a~~s~~~fa~~~~~~~~~~~~~vYglaQC~~Dls~~~C~~CL~~a~~~~~ 140 (168)
..+.||.++++.++.|+++|+.||..|+.+++.++.+|+++..+.. ++++||||+||+|||++++|..||+.++.+|+
T Consensus 6 v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~--~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~~ 83 (108)
T 3a2e_A 6 VSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSG--GAPTAYGRATCKQSISQSDCTACLSNLVNRIF 83 (108)
T ss_dssp EEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCST--TCCCEEEEEEECTTSCHHHHHHHHHHHHTTHH
T ss_pred eeeecCCCccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCC--CCceEEEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 4577888899999999999999999999998876677888776543 67899999999999999999999999999999
Q ss_pred ccCCCCcceEEEcCceeEEEecCCC
Q 041051 141 SCCDGKQGGRVITASCIINYEIYPF 165 (168)
Q Consensus 141 ~~c~~~~g~~v~~~~C~lRy~~~~F 165 (168)
++|++++||+||+++|+||||+++|
T Consensus 84 ~~C~~~~g~~i~~~~C~lRY~~~~F 108 (108)
T 3a2e_A 84 SICNNAIGARVQLVDCFIQYEQRSF 108 (108)
T ss_dssp HHTTSBSSEEEEETTEEEEEESSCC
T ss_pred HHCCCCceEEEECCCEEEEEeCCcC
Confidence 9999999999999999999999998
|
| >3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00