Citrus Sinensis ID: 041051


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
NGLALCRGDVSASDCKRCVADAVSTIRKSCPYSKSAKIFYDNCMFKYSNDNFFGQIDNGTKYFMWNVNNVSNRVTFNQKSKELLSRLANEASGNPKLYAAGELELNEESKKKIYGLAQCTRDLSYNDCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPFVKA
cEEEEccccccHHHHHHHHHHHHHHHHHHccccccEEEEcccEEEEEEccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccEEEcEEEEccccccEEEEEEEEcccccHHHHHHHHHHHHHHccccccccccEEEEcccEEEEEEccccccc
ccEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEccccHcccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccccEcccEEEcccccccEEEEEEEEcccccHHHHHHHHHHHHHHccHHcccccccEEEccccEEEEEEEccccc
nglalcrgdvsasdckRCVADAVSTirkscpysksakifydncmfkysndnffgqidnGTKYFMWNVNNVSNRVTFNQKSKELLSRLANeasgnpklyaagelelnEESKKKIYGLAQctrdlsyndCKMCLDRiigdlpsccdgkqggrviTASCiinyeiypfvka
nglalcrgdvsasdckrCVADAvstirkscpyskSAKIFYDNCMFKYSNDNFFGQIDNGTKYFMWNVNNVSNRVTFNQKSKELLSRLANEASGNPKLYAAGELELNEESKKKIYGLAQCTRDLSYNDCKMCLDRIIGDLPSCCDGKQGGRVITAsciinyeiypfvka
NGLALCRGDVSASDCKRCVADAVSTIRKSCPYSKSAKIFYDNCMFKYSNDNFFGQIDNGTKYFMWNVNNVSNRVTFNQKSKELLSRLANEASGNPKLYAAGELELNEESKKKIYGLAQCTRDLSYNDCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPFVKA
****LCRGDVSASDCKRCVADAVSTIRKSCPYSKSAKIFYDNCMFKYSNDNFFGQIDNGTKYFMWNVNNVSNRVTFN*********************************KKIYGLAQCTRDLSYNDCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPFV**
NGLALCRGDVSASDCKRCVADAVSTIRKSCPYSKSAKIFYDNCMFKYSNDNFFGQIDNGTKYFMWNVNNVSNRVTFNQKSKELLSRLANEASGNPKLYAAGELELNEESKKKIYGLAQCTRDLSYNDCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPFVK*
NGLALCRGDVSASDCKRCVADAVSTIRKSCPYSKSAKIFYDNCMFKYSNDNFFGQIDNGTKYFMWNVNNVSNRVTFNQKSKELLSRLANEASGNPKLYAAGELELNEESKKKIYGLAQCTRDLSYNDCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPFVKA
NGLALCRGDVSASDCKRCVADAVSTIRKSCPYSKSAKIFYDNCMFKYSNDNFFGQIDNGTKYFMWNVNNVSNRVTFNQKSKELLSRLANEASGNPKLYAAGELELNEESKKKIYGLAQCTRDLSYNDCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPFVKA
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NGLALCRGDVSASDCKRCVADAVSTIRKSCPYSKSAKIFYDNCMFKYSNDNFFGQIDNGTKYFMWNVNNVSNRVTFNQKSKELLSRLANEASGNPKLYAAGELELNEESKKKIYGLAQCTRDLSYNDCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPFVKA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query168 2.2.26 [Sep-21-2011]
Q9LRJ9252 Cysteine-rich repeat secr yes no 0.982 0.654 0.529 3e-48
Q9M2I5258 Putative cysteine-rich re no no 0.958 0.624 0.455 1e-38
Q9LRL8256 Putative cysteine-rich re no no 0.940 0.617 0.448 8e-35
Q9LRK8256 Cysteine-rich repeat secr no no 0.946 0.621 0.426 2e-33
Q9SVI0266 Cysteine-rich repeat secr no no 0.946 0.597 0.426 3e-33
P0CJ61256 Cysteine-rich repeat secr no no 0.946 0.621 0.426 3e-33
P0CJ60256 Cysteine-rich repeat secr no no 0.946 0.621 0.426 3e-33
P0CJ59256 Cysteine-rich repeat secr no no 0.946 0.621 0.426 3e-33
P0CJ58256 Cysteine-rich repeat secr no no 0.946 0.621 0.426 3e-33
P0CJ57256 Cysteine-rich repeat secr no no 0.946 0.621 0.426 3e-33
>sp|Q9LRJ9|CRR38_ARATH Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana GN=CRRSP38 PE=2 SV=1 Back     alignment and function desciption
 Score =  190 bits (483), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 90/170 (52%), Positives = 122/170 (71%), Gaps = 5/170 (2%)

Query: 1   NGLALCRGDVSASDCKRCVADAVSTIRKSCPYSKSAKIFYDNCMFKYSNDNFFGQIDNGT 60
           NGLALCRGD S+SDC+ C+  A+  +R+ CP +K+  ++YDNC+ KYS+ NFFG+ID   
Sbjct: 85  NGLALCRGDASSSDCRSCLETAIPELRQRCPNNKAGIVWYDNCLVKYSSTNFFGKIDFEN 144

Query: 61  KYFMWNVNNVSNRVTFNQKSKELLSRLANEASG--NPKLYAAGELELNEESKKKIYGLAQ 118
           +++++NV NVS+  TFN ++K LL+ L  +A+   N KL+A GE  +    K K+YGL Q
Sbjct: 145 RFYLYNVKNVSDPSTFNSQTKALLTELTKKATTRDNQKLFATGEKNI---GKNKLYGLVQ 201

Query: 119 CTRDLSYNDCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPFVKA 168
           CTRDL    CK CL+ IIG+LP+CCDGK+GGRV+  SC   YEIYPFVK 
Sbjct: 202 CTRDLKSITCKACLNGIIGELPNCCDGKEGGRVVGGSCNFRYEIYPFVKT 251





Arabidopsis thaliana (taxid: 3702)
>sp|Q9M2I5|CRR61_ARATH Putative cysteine-rich repeat secretory protein 61 OS=Arabidopsis thaliana GN=CRRSP61 PE=3 SV=1 Back     alignment and function description
>sp|Q9LRL8|CRR21_ARATH Putative cysteine-rich repeat secretory protein 21 OS=Arabidopsis thaliana GN=CRRSP21 PE=5 SV=2 Back     alignment and function description
>sp|Q9LRK8|CRR29_ARATH Cysteine-rich repeat secretory protein 29 OS=Arabidopsis thaliana GN=CRRSP29 PE=2 SV=1 Back     alignment and function description
>sp|Q9SVI0|CRR41_ARATH Cysteine-rich repeat secretory protein 41 OS=Arabidopsis thaliana GN=CRRSP41 PE=2 SV=1 Back     alignment and function description
>sp|P0CJ61|CRR54_ARATH Cysteine-rich repeat secretory protein 54 OS=Arabidopsis thaliana GN=CRRSP54 PE=3 SV=1 Back     alignment and function description
>sp|P0CJ60|CRR53_ARATH Cysteine-rich repeat secretory protein 53 OS=Arabidopsis thaliana GN=CRRSP53 PE=3 SV=1 Back     alignment and function description
>sp|P0CJ59|CRR52_ARATH Cysteine-rich repeat secretory protein 52 OS=Arabidopsis thaliana GN=CRRSP52 PE=3 SV=1 Back     alignment and function description
>sp|P0CJ58|CRR51_ARATH Cysteine-rich repeat secretory protein 51 OS=Arabidopsis thaliana GN=CRRSP51 PE=3 SV=1 Back     alignment and function description
>sp|P0CJ57|CRR50_ARATH Cysteine-rich repeat secretory protein 50 OS=Arabidopsis thaliana GN=CRRSP50 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query168
224095758242 predicted protein [Populus trichocarpa] 0.982 0.681 0.664 4e-60
255585783243 DUF26 domain-containing protein 2 precur 0.982 0.679 0.648 4e-60
224093230242 predicted protein [Populus trichocarpa] 0.982 0.681 0.658 3e-59
224132594242 predicted protein [Populus trichocarpa] 0.982 0.681 0.664 7e-59
224132966214 predicted protein [Populus trichocarpa] 0.982 0.771 0.658 1e-58
224132974242 predicted protein [Populus trichocarpa] 0.982 0.681 0.652 3e-58
224093228242 predicted protein [Populus trichocarpa] 0.982 0.681 0.652 5e-58
225447364252 PREDICTED: cysteine-rich repeat secretor 0.976 0.650 0.626 4e-56
297739322266 unnamed protein product [Vitis vinifera] 0.976 0.616 0.626 5e-56
224132606245 predicted protein [Populus trichocarpa] 0.988 0.677 0.642 1e-54
>gi|224095758|ref|XP_002310467.1| predicted protein [Populus trichocarpa] gi|222853370|gb|EEE90917.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  235 bits (600), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 111/167 (66%), Positives = 131/167 (78%), Gaps = 2/167 (1%)

Query: 2   GLALCRGDVSASDCKRCVADAVSTIRKSCPYSKSAKIFYDNCMFKYSNDNFFGQIDNGTK 61
           GLALCRGD S SDCK CV +A S IRK CPY+++A I+YDNC+ KYSN  FFGQIDNG K
Sbjct: 78  GLALCRGDASTSDCKTCVVEAGSEIRKRCPYNEAAIIWYDNCLLKYSNKGFFGQIDNGNK 137

Query: 62  YFMWNVNNVSNRVTFNQKSKELLSRLANEASGNPKLYAAGELELNEESKKKIYGLAQCTR 121
           ++MWNVN VS  V FN+K+KELL++LAN+A   PKLYA G +EL E +  K+YGL QCTR
Sbjct: 138 FYMWNVNAVSEPVPFNEKTKELLTQLANKAKATPKLYATGGMELGEST--KLYGLVQCTR 195

Query: 122 DLSYNDCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPFVKA 168
           DLS   CK CLD IIG+LPSCCDGK+GGRV++ SC   YEIYPFV A
Sbjct: 196 DLSSAVCKKCLDGIIGELPSCCDGKEGGRVVSGSCNFRYEIYPFVNA 242




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585783|ref|XP_002533571.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] gi|223526548|gb|EEF28806.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224093230|ref|XP_002309844.1| predicted protein [Populus trichocarpa] gi|222852747|gb|EEE90294.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224132594|ref|XP_002327834.1| predicted protein [Populus trichocarpa] gi|222837243|gb|EEE75622.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224132966|ref|XP_002327923.1| predicted protein [Populus trichocarpa] gi|222837332|gb|EEE75711.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224132974|ref|XP_002327925.1| predicted protein [Populus trichocarpa] gi|222837334|gb|EEE75713.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224093228|ref|XP_002309843.1| predicted protein [Populus trichocarpa] gi|222852746|gb|EEE90293.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225447364|ref|XP_002274745.1| PREDICTED: cysteine-rich repeat secretory protein 38-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297739322|emb|CBI28973.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224132606|ref|XP_002327837.1| predicted protein [Populus trichocarpa] gi|222837246|gb|EEE75625.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query168
TAIR|locus:2095662252 AT3G22060 "AT3G22060" [Arabido 0.976 0.650 0.532 1.2e-47
TAIR|locus:2085470258 AT3G58310 "AT3G58310" [Arabido 0.958 0.624 0.455 1.1e-37
TAIR|locus:2095642256 AT3G21990 "AT3G21990" [Arabido 0.946 0.621 0.426 2.5e-33
TAIR|locus:2065878255 AT2G31620 "AT2G31620" [Arabido 0.958 0.631 0.430 3.7e-32
TAIR|locus:2830202260 AT3G21945 "AT3G21945" [Arabido 0.946 0.611 0.405 2.7e-29
TAIR|locus:2115728 675 CRK25 "cysteine-rich RLK (RECE 0.964 0.24 0.427 3.3e-29
TAIR|locus:2166091263 AT5G48540 "AT5G48540" [Arabido 0.970 0.619 0.379 3.9e-28
TAIR|locus:2095582 441 AT3G21960 [Arabidopsis thalian 0.880 0.335 0.402 1.3e-27
TAIR|locus:2121474273 AT4G20680 "AT4G20680" [Arabido 0.946 0.582 0.377 7.3e-27
TAIR|locus:2095652273 AT3G22000 "AT3G22000" [Arabido 0.946 0.582 0.371 1.9e-26
TAIR|locus:2095662 AT3G22060 "AT3G22060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 90/169 (53%), Positives = 122/169 (72%)

Query:     1 NGLALCRGDVSASDCKRCVADAVSTIRKSCPYSKSAKIFYDNCMFKYSNDNFFGQIDNGT 60
             NGLALCRGD S+SDC+ C+  A+  +R+ CP +K+  ++YDNC+ KYS+ NFFG+ID   
Sbjct:    85 NGLALCRGDASSSDCRSCLETAIPELRQRCPNNKAGIVWYDNCLVKYSSTNFFGKIDFEN 144

Query:    61 KYFMWNVNNVSNRVTFNQKSKELLSRLANEAS--GNPKLYAAGELELNEESKKKIYGLAQ 118
             +++++NV NVS+  TFN ++K LL+ L  +A+   N KL+A GE  +    K K+YGL Q
Sbjct:   145 RFYLYNVKNVSDPSTFNSQTKALLTELTKKATTRDNQKLFATGEKNIG---KNKLYGLVQ 201

Query:   119 CTRDLSYNDCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPFVK 167
             CTRDL    CK CL+ IIG+LP+CCDGK+GGRV+  SC   YEIYPFVK
Sbjct:   202 CTRDLKSITCKACLNGIIGELPNCCDGKEGGRVVGGSCNFRYEIYPFVK 250




GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0005773 "vacuole" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0009737 "response to abscisic acid stimulus" evidence=IEP
GO:0002237 "response to molecule of bacterial origin" evidence=RCA
TAIR|locus:2085470 AT3G58310 "AT3G58310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095642 AT3G21990 "AT3G21990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065878 AT2G31620 "AT2G31620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2830202 AT3G21945 "AT3G21945" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166091 AT5G48540 "AT5G48540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095582 AT3G21960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121474 AT4G20680 "AT4G20680" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095652 AT3G22000 "AT3G22000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LRJ9CRR38_ARATHNo assigned EC number0.52940.98210.6547yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00070254
hypothetical protein (243 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query168
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 2e-21
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 5e-18
>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information
 Score = 83.3 bits (206), Expect = 2e-21
 Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 4/99 (4%)

Query: 68  NNVSNRVTFNQKSKELLSRLANE-ASGNPKLYAAGELELNEESKKKIYGLAQCTRDLSYN 126
           N  +   TF      LLS L++  AS + K +AAG    +  +   +YGLAQC  DLS +
Sbjct: 11  NYTTANSTFESNLNALLSSLSSNAASSSGKGFAAGT---SGAAPDTVYGLAQCRGDLSAS 67

Query: 127 DCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPF 165
           DC+ CL   + +L  CC  K+GGR+   SC + YE YPF
Sbjct: 68  DCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106


This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 168
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.95
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.72
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information
Probab=99.95  E-value=7.7e-28  Score=167.18  Aligned_cols=95  Identities=43%  Similarity=0.839  Sum_probs=75.7

Q ss_pred             ccC-cchhhhhHHHHHHHHHHHHHhccC-CCceeeeeeecccCCcceEEEEEecCCCCChhchHHHHHHHHhhccccCCC
Q 041051           68 NNV-SNRVTFNQKSKELLSRLANEASGN-PKLYAAGELELNEESKKKIYGLAQCTRDLSYNDCKMCLDRIIGDLPSCCDG  145 (168)
Q Consensus        68 ~~~-~~~~~f~~~~~~ll~~l~~~a~~s-~~~fa~~~~~~~~~~~~~vYglaQC~~Dls~~~C~~CL~~a~~~~~~~c~~  145 (168)
                      +++ +++..|.+++..||.+|+..++.+ +.+|++++.+.   ++++||||+||++||++++|..||+.++.+|+++|++
T Consensus        10 ~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~---~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~   86 (106)
T PF01657_consen   10 NNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGS---GPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPG   86 (106)
T ss_dssp             B----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--S---T---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTS
T ss_pred             CCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeecCC---CCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCC
Confidence            344 456669999999999999998753 47899998643   7789999999999999999999999999999999999


Q ss_pred             CcceEEEcCceeEEEecCCC
Q 041051          146 KQGGRVITASCIINYEIYPF  165 (168)
Q Consensus       146 ~~g~~v~~~~C~lRy~~~~F  165 (168)
                      ++||+|++++|+||||+++|
T Consensus        87 ~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   87 SRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             BSSEEEEESSEEEEEESS--
T ss_pred             CceEEEECCCEEEEEECCCC
Confidence            99999999999999999998



The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query168
3a2e_A108 Crystal Structure Of Ginkbilobin-2, The Novel Antif 3e-04
>pdb|3A2E|A Chain A, Crystal Structure Of Ginkbilobin-2, The Novel Antifungal Protein From Ginkgo Biloba Seeds Length = 108 Back     alignment and structure

Iteration: 1

Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 26/52 (50%) Query: 114 YGLAQCTRDLSYNDCKMCLDRIIGDLPSCCDGKQGGRVITASCIINYEIYPF 165 YG A C + +S +DC CL ++ + S C+ G RV C I YE F Sbjct: 57 YGRATCKQSISQSDCTACLSNLVNRIFSICNNAIGARVQLVDCFIQYEQRSF 108

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query168
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 2e-24
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 1e-16

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query168
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.97
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.97
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.8
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.78
>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure
Probab=99.97  E-value=2.2e-30  Score=179.58  Aligned_cols=103  Identities=24%  Similarity=0.475  Sum_probs=94.3

Q ss_pred             eeeecccccCcchhhhhHHHHHHHHHHHHHhccCCCceeeeeeecccCCcceEEEEEecCCCCChhchHHHHHHHHhhcc
Q 041051           61 KYFMWNVNNVSNRVTFNQKSKELLSRLANEASGNPKLYAAGELELNEESKKKIYGLAQCTRDLSYNDCKMCLDRIIGDLP  140 (168)
Q Consensus        61 ~~~~~~~~~~~~~~~f~~~~~~ll~~l~~~a~~s~~~fa~~~~~~~~~~~~~vYglaQC~~Dls~~~C~~CL~~a~~~~~  140 (168)
                      ..+.||.++++.++.|+++|+.||..|+.+++.++.+|+++..+..  ++++||||+||+|||++++|..||+.++.+|+
T Consensus         6 v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~--~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~~   83 (108)
T 3a2e_A            6 VSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSG--GAPTAYGRATCKQSISQSDCTACLSNLVNRIF   83 (108)
T ss_dssp             EEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCST--TCCCEEEEEEECTTSCHHHHHHHHHHHHTTHH
T ss_pred             eeeecCCCccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCC--CCceEEEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence            4577888899999999999999999999998876677888776543  67899999999999999999999999999999


Q ss_pred             ccCCCCcceEEEcCceeEEEecCCC
Q 041051          141 SCCDGKQGGRVITASCIINYEIYPF  165 (168)
Q Consensus       141 ~~c~~~~g~~v~~~~C~lRy~~~~F  165 (168)
                      ++|++++||+||+++|+||||+++|
T Consensus        84 ~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           84 SICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHCCCCceEEEECCCEEEEEeCCcC
Confidence            9999999999999999999999998



>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00