Citrus Sinensis ID: 041094

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520---
Protein Sequence
MASINFNPFENWFNKPTNPLPIINFHSLTESFSFFNPGKPTSNFASISSSLFKRKTPKKPDPETEPQEPGYYKKMLDQYFWECENLPDYRHAPEVEEILKEEPLFEKKENPSEEEIKENEEWWKSFRESPVVQFMARAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPMPRKAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIATWEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQANGGVWPGVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMDQITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIVERLKAENEAKEARREKRMEALIKEKQEKMDAMVKAKNGSNPSDP
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEccccccccccHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHccccccHHHHHHccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccEccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccccccHHHHHcHHHHccHHHHHHHHHHHHHcccccccccccccccHHHHHcHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHcccEcccEEEEccccHccccHHHHcccHHHcccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEccccHHHHHHHHcccccccccHHHHHHHHHHccccccHHHHcHHHHHHHHcccccEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccccccc
Coil and Loop (DISEMBL)
masinfnpfenwfnkptnplpiinfhsltesfsffnpgkptsnfasissslfkrktpkkpdpetepqepgyykKMLDQYFWecenlpdyrhapeveeilkeeplfekkenpseeeIKENEEWWKSFRESPVVQFMARAEEIADYLNEVelkkndkpyrpedkKLWRALphvigldgrpmprkaiktkeesDDKFWDFMKQFQFglwgfrqrpyppgrpidVAQAIGYKRLEKRYYDFIMrsggwyykdrlgrtrgpleLITLktawgagiidkdtfiwgedmdewvpIHMVYGLEKAIATWEVRLGAAATAFLHKLqkgippwvplkghekKTYKQLQEEAMESRRRDNAVLQanggvwpgvripshALFLWASGSELTTMleadhmpnkfipkDLRLQLSkiipglrpwevLSVEQAMDQITyggewyreplgshttgppyireWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIVERLKAENEAKEARREKRMEALIKEKQEKMDAMVKakngsnpsdp
Flexible Loop (DISEMBL)
MASINFNPFENWFNKPTNPLPIINFHSLTESFSFFNPGKPTSNFASIssslfkrktpkkpdpetepqepgyyKKMLDQYFWECENLPDYRHAPEVEEIlkeeplfekkenpseeeikeneewwksfresPVVQFMARAEEIADYLnevelkkndkpyrpedkklwralphvigldgrpmprkAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWYYKDRLGRTRGPLELItlktawgagiiDKDTFIWGEDMDEWVPIHMVYGLEKAIATWEVRLGAAATAFLHKLQkgippwvplkghEKKTYKQLQEEAMESRRRDNAVLQANGGVWPGVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMDQITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGAlnsllekvpgfntIVERLKAENEAKEARREKRMEALIKEKQEKMDAmvkakngsnpsdp
Low Complexity Region (SEG)
MASINFNPFENWFNKPTNPLPIINFHSLTESFSFFNPGKPTSNFASISSSLFKRktpkkpdpetepqepGYYKKMLDQYFWECENLPDYRHAPEVEEILKEEPLFekkenpseeeikeneewwksFRESPVVQFMARAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPMPRKAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIATWEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQANGGVWPGVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMDQITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIVerlkaeneakearrekrmeaLIKEKQEKMDAMVKAKNGSNPSDP
Disordered region (IsUnstruct)
*****FNPFENWFNKPTNPLPIINFHSLTESFSFF***********************************YYKKMLDQYFWECENLPDYRHA*****************************WWKSFRESPVVQFMARAEEIADYLNEVEL************KLWRALPHVIGLD*****************KFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIATWEVRLGAAATAFLHKLQKGIPPWVPLKG*********************AVLQANGGVWPGVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMDQITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIVER******************************************
Disordered Region (DISOPRED)
***INFNPFENWFNKPTNPLPIINFHSLTESF****************************************KKMLDQYFWECENLPDYRHAPEVEEILKEEPL*****************WWKSFRESPVVQFMARAEEIADYLNE*********YRPEDKKLWRALPHVIGLDGRP***********SDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIATWEVRLGAAATAFLHKLQKGIPPWVPLKGHEK*******************VLQANGGVWPGVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMDQITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIVERLK****************************************
Disordered Region (DISEMBL)
MASINFNPFENWFNKPTNPLPIINFHSLTESFSFFNPGKPTSNFASISSSL****************EPGYYKKMLDQYFWECENLPDYRHAPEVEEILKEEPLFEK*************EWWKSFRESPVVQFMARAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPMPRKAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIATWEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQANGGVWPGVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMDQITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIVERLKAENEAKEARREKRMEALIKEKQEKMDAM************
Disordered Region (DISPRO)
**SINFNPFENWFNKPTNPLPIINFHSLTESFSFFNPGKPTSNFASISSSLFK************PQEPGYYKKMLDQYFWECENLPDYRHAPEVEEILKEEPLFEKKENPSEEEIKENEEWWKSFRESPVVQFMARAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPMPRKAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIATWEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQANGGVWPGVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMDQITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIVERLKAENEAKEARREKRMEALIKEKQEK**AMV***********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASINFNPFENWFNKPTNPLPIINFHSLTESFSFFNPGKPTSNFASISSSLFKRKTPKKPDPETEPQEPGYYKKMLDQYFWECENLPDYRHAPEVEEILKEEPLFEKKENPSEEEIKENEEWWKSFRESPVVQFMARAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPMPRKAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIATWEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQANGGVWPGVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMDQITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIxxxxxxxxxxxxxxxxxxxxxLIKEKQEKMDAMVKAKNGSNPSDP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	523
240256247	527	uncharacterized protein [Arabidopsis tha	0.927	0.920	0.723	0.0
30794120	527	unknown protein [Arabidopsis thaliana]	0.927	0.920	0.719	0.0
225439462	506	PREDICTED: uncharacterized protein LOC10	0.927	0.958	0.744	0.0
297810239	521	hypothetical protein ARALYDRAFT_907991 [	0.927	0.930	0.718	0.0
224139248	534	predicted protein [Populus trichocarpa]	0.931	0.911	0.690	0.0
449483562	537	PREDICTED: uncharacterized LOC101207080	0.965	0.940	0.701	0.0
449439847	508	PREDICTED: uncharacterized protein LOC10	0.938	0.966	0.716	0.0
255571435	505	conserved hypothetical protein [Ricinus	0.908	0.940	0.718	0.0
7327818	559	hypothetical protein [Arabidopsis thalia	0.910	0.851	0.641	0.0
356503061	529	PREDICTED: uncharacterized protein LOC10	0.959	0.948	0.630	0.0

>gi|240256247|ref|NP_568092.4| uncharacterized protein [Arabidopsis thaliana] gi|30911095|gb|AAP41935.1| unknown protein [Arabidopsis thaliana] gi|332002980|gb|AED90363.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/492 (72%), Positives = 418/492 (84%), Gaps = 7/492 (1%)

Query: 1   MASINFNPFENWFNKPTNPLPIINFHSLTESFSFFNPGKPTSNFASISSSLFKRKTPKKP 60
           M+S+NFNPF+NWF KP NP+P INF SL +SF    P   + NFASI    F +K+PK  
Sbjct: 1   MSSMNFNPFQNWFEKPPNPVPSINFVSLADSFF---PKSQSPNFASIGLPKFSKKSPK-- 55

Query: 61  DPETE-PQEPGYYKKMLDQYFWECENLPDYRHAPEVEEILKEEPLFEKKENPSEEEIKEN 119
            PET    EPG YK++ +Q+ WECEN+PDYRH PEV+++L E+P+FEKKENPS EEI+  
Sbjct: 56  -PETAGTDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAE 114

Query: 120 EEWWKSFRESPVVQFMARAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPM 179
           ++WW+SFR SPVVQFM RAEEIAD +N++EL+ ND PYR EDK  WRA+PHV G DGRPM
Sbjct: 115 QKWWESFRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPM 174

Query: 180 PRKAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIM 239
           PRKAIK+KEESDDKFWDFMKQF FGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIM
Sbjct: 175 PRKAIKSKEESDDKFWDFMKQFLFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIM 234

Query: 240 RSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIA 299
           ++GGW+YKDRLGR+RGP E+ITLKTA+GAGIID+DTFIWGEDMDEW PIHMVYGLE AIA
Sbjct: 235 KTGGWWYKDRLGRSRGPCEIITLKTAYGAGIIDRDTFIWGEDMDEWAPIHMVYGLEPAIA 294

Query: 300 TWEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQANGGVW 359
           TWEVRLGAAATAFLHKLQKGIPPWVPLKG E KTYKQLQ+EA+ES++RD AVL+ANGGVW
Sbjct: 295 TWEVRLGAAATAFLHKLQKGIPPWVPLKGREPKTYKQLQKEAIESKKRDMAVLEANGGVW 354

Query: 360 PGVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAM 419
           PGVR PSHALFLWASGSELTT+LE+DHMPNKFIPK LRL+L+K+IPGLRPWEV+S+EQAM
Sbjct: 355 PGVRTPSHALFLWASGSELTTVLESDHMPNKFIPKQLRLELAKVIPGLRPWEVISIEQAM 414

Query: 420 DQITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIV 479
           DQI+YGGEWYREPLG++TTGPPYIREWN  ++   R+   L       L   VPGF+TI+
Sbjct: 415 DQISYGGEWYREPLGTYTTGPPYIREWNRSVMRLFRIFYNLSVRVGQKLERTVPGFDTIM 474

Query: 480 ERLKAENEAKEA 491
           ++++ + + + A
Sbjct: 475 DKVQKDYDKRIA 486

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30794120|gb|AAP40502.1| unknown protein [Arabidopsis thaliana]

 Score =  745 bits (1924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/492 (71%), Positives = 417/492 (84%), Gaps = 7/492 (1%)

Query: 1   MASINFNPFENWFNKPTNPLPIINFHSLTESFSFFNPGKPTSNFASISSSLFKRKTPKKP 60
           M+S+NFNPF+NWF KP NP+P INF SL +SF    P   + NFASI    F +K+PK  
Sbjct: 1   MSSMNFNPFQNWFEKPPNPVPSINFVSLADSFF---PKSQSPNFASIGLPKFSKKSPK-- 55

Query: 61  DPETE-PQEPGYYKKMLDQYFWECENLPDYRHAPEVEEILKEEPLFEKKENPSEEEIKEN 119
            PET    EPG YK++ +Q+ WECEN+PDYRH PEV+++L E+P+FEKKENPS EEI+  
Sbjct: 56  -PETAGTDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAE 114

Query: 120 EEWWKSFRESPVVQFMARAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPM 179
           ++WW+SFR SPVVQFM RAEEIAD +N++EL+ ND PYR EDK  WRA+PHV G DGRPM
Sbjct: 115 QKWWESFRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPM 174

Query: 180 PRKAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIM 239
           PRKAIK+KEESDDKFWDFMKQF FGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIM
Sbjct: 175 PRKAIKSKEESDDKFWDFMKQFLFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIM 234

Query: 240 RSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIA 299
           ++GGW+YKDRLGR+RGP E+ITLK A+GAGIID+DTFIWGEDMDEW PIHMVYGLE AIA
Sbjct: 235 KTGGWWYKDRLGRSRGPCEIITLKKAYGAGIIDRDTFIWGEDMDEWAPIHMVYGLEPAIA 294

Query: 300 TWEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQANGGVW 359
           TWEVRLGAAATAFLHKLQKGIPPWVPLKG E KTYKQLQ+EA+ES++RD AVL+ANGGVW
Sbjct: 295 TWEVRLGAAATAFLHKLQKGIPPWVPLKGREPKTYKQLQKEAIESKKRDMAVLEANGGVW 354

Query: 360 PGVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAM 419
           PGVR PSHALFLWASGSELTT+LE+DHMPNKFIPK LRL+L+K+IPGLRPWEV+S+EQA+
Sbjct: 355 PGVRTPSHALFLWASGSELTTVLESDHMPNKFIPKQLRLELAKVIPGLRPWEVISIEQAV 414

Query: 420 DQITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIV 479
           DQI+YGGEWYREPLG++TTGPPYIREWN  ++   R+   L       L   VPGF+TI+
Sbjct: 415 DQISYGGEWYREPLGTYTTGPPYIREWNRSVMRLFRIFYNLSVRVGQKLERTVPGFDTIM 474

Query: 480 ERLKAENEAKEA 491
           ++++ + + + A
Sbjct: 475 DKVQKDYDKRIA 486

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439462|ref|XP_002268305.1| PREDICTED: uncharacterized protein LOC100257554 [Vitis vinifera] gi|297735626|emb|CBI18120.3| unnamed protein product [Vitis vinifera]

 Score =  740 bits (1910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/493 (74%), Positives = 408/493 (82%), Gaps = 8/493 (1%)

Query: 1   MASINFNPFENWFNKPTNPLPIINFHSLTESFSFFNPGKPTSNFASISSSLFKRKTPKKP 60
           M SINFNPF NWF KP N            S +  N  K T NFASIS S   +KTPK  
Sbjct: 1   MGSINFNPFGNWFQKPPN----PIPPINLLSCNLLNTPK-TLNFASISGSNTSKKTPKPE 55

Query: 61  DPETEPQEPGYYKKMLDQYFWECENLPDYRHAPEVEEILKEEPLFEKKENPSEEEIKENE 120
            P  EP++   YKKML+Q+FWE E +P+YRHAPEVE IL E+P FEKKENP+EEEI+ENE
Sbjct: 56  KPSDEPEK---YKKMLEQFFWESETMPNYRHAPEVERILNEDPNFEKKENPTEEEIRENE 112

Query: 121 EWWKSFRESPVVQFMARAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPMP 180
           +WW  FR SPVVQF+ARAEEIA  +NE+EL++N  PY  ED+KLW+A+PHV GLDGRPMP
Sbjct: 113 KWWNEFRSSPVVQFLARAEEIATKMNEMELEENANPYWDEDRKLWQAVPHVPGLDGRPMP 172

Query: 181 RKAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMR 240
           RKAIKTK+ESDDKFWDF +QF FGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMR
Sbjct: 173 RKAIKTKKESDDKFWDFTRQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMR 232

Query: 241 SGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIAT 300
           SGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEW PIHMVYGLE AIAT
Sbjct: 233 SGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWAPIHMVYGLEPAIAT 292

Query: 301 WEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQANGGVWP 360
           WEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEA+ES++RD AVL+AN GVWP
Sbjct: 293 WEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAIESKKRDLAVLEANDGVWP 352

Query: 361 GVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMD 420
           GVR PSHALFLWASGSELTT+LE D+MPNK+IPKDLRLQL+++IPGLRPWEVLSVEQAMD
Sbjct: 353 GVRTPSHALFLWASGSELTTILEEDYMPNKYIPKDLRLQLAEVIPGLRPWEVLSVEQAMD 412

Query: 421 QITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIVE 480
           QITYGGEWYREP G  TTGPPYI  WN D+     +   L     N L+  VPGF+ I+E
Sbjct: 413 QITYGGEWYREPFGMFTTGPPYIENWNNDVKRMFSIFYKLSARVYNKLVRTVPGFDNIME 472

Query: 481 RLKAENEAKEARR 493
           ++ A+  A+EA R
Sbjct: 473 KVDADAAAREAIR 485

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810239|ref|XP_002873003.1| hypothetical protein ARALYDRAFT_907991 [Arabidopsis lyrata subsp. lyrata] gi|297318840|gb|EFH49262.1| hypothetical protein ARALYDRAFT_907991 [Arabidopsis lyrata subsp. lyrata]

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/491 (71%), Positives = 413/491 (84%), Gaps = 6/491 (1%)

Query: 1   MASINFNPFENWFNKPTNPLPIINFHSLTESFSFFNPGKPTSNFASISSSLFKRKTPKKP 60
           M+S+NFNPF+NWF KP NP+P INF SL +SF    P   + NFA+I      + + K P
Sbjct: 1   MSSMNFNPFQNWFEKPPNPVPSINFVSLADSFF---PKSQSPNFAAIG---LPKFSKKPP 54

Query: 61  DPETEPQEPGYYKKMLDQYFWECENLPDYRHAPEVEEILKEEPLFEKKENPSEEEIKENE 120
            PET   EPG YK++ +Q+ WECEN+PDYRH PEV++IL E+P+FEKKENPS EEI+  +
Sbjct: 55  KPETGTDEPGPYKQIAEQFLWECENIPDYRHTPEVDKILNEDPVFEKKENPSTEEIEAEQ 114

Query: 121 EWWKSFRESPVVQFMARAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPMP 180
           +WW+ FR SPVVQFM RAEEIAD +N++EL+ ND PYR EDK  WRA+PHV G DGRPMP
Sbjct: 115 KWWERFRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMP 174

Query: 181 RKAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMR 240
           RKAIK+KEESDDKFWDFMKQF FGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIM+
Sbjct: 175 RKAIKSKEESDDKFWDFMKQFLFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMK 234

Query: 241 SGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIAT 300
           +GGW+YKDRLGR+RGP ELITLKTA+GAGIID+DTFIWGEDMDEW PIHMVYGLE AIAT
Sbjct: 235 TGGWWYKDRLGRSRGPCELITLKTAYGAGIIDRDTFIWGEDMDEWAPIHMVYGLEPAIAT 294

Query: 301 WEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQANGGVWP 360
           WEVRLGAAATAFLHKLQKGIPPWVPLKG E KTYKQLQ+EA+ES++RD AVL+AN GVWP
Sbjct: 295 WEVRLGAAATAFLHKLQKGIPPWVPLKGREPKTYKQLQKEAIESKKRDMAVLEANDGVWP 354

Query: 361 GVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMD 420
           GVR PSHALFLWASGSELTT+LE+DHMPNKFIPK LR +L+K+IPGLRPWEV+S+EQAMD
Sbjct: 355 GVRTPSHALFLWASGSELTTVLESDHMPNKFIPKQLRQELAKVIPGLRPWEVISIEQAMD 414

Query: 421 QITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIVE 480
           QI+YGGEWYREPLG++TTGPPYIREWN  ++   R+   L       L   VPGF+TI+E
Sbjct: 415 QISYGGEWYREPLGTYTTGPPYIREWNRSVMRLFRIFYNLSVRVGQKLERTVPGFDTIME 474

Query: 481 RLKAENEAKEA 491
           +++ + + + A
Sbjct: 475 KVQKDYDTRIA 485

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139248|ref|XP_002323019.1| predicted protein [Populus trichocarpa] gi|222867649|gb|EEF04780.1| predicted protein [Populus trichocarpa]

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/514 (69%), Positives = 419/514 (81%), Gaps = 27/514 (5%)

Query: 15  KPTNPLPIINFHSLTESFSFFNPGKPTSNFASIS-SSLFKRKTPKKPDPETEPQEPGYYK 73
           KP  PLP IN  SL    SF N  K T NF+S+S S+ FK+  P+KPDP+   Q+PGYY+
Sbjct: 17  KPPKPLPSINLLSL---ISFKNSSK-TPNFSSLSISNPFKK--PQKPDPDPTQQQPGYYR 70

Query: 74  KMLDQYFWECENLPDYRHAPEVEEILKEEPLFEKKENPSEEEIKENEEWWKSFRESPVVQ 133
           +M+DQYFWECENLPDYRH PEVE+IL E+P+FEKKENP+ EEI+ENE WW  FR SPVV+
Sbjct: 71  QMIDQYFWECENLPDYRHTPEVEKILNEDPVFEKKENPTPEEIEENERWWAEFRASPVVK 130

Query: 134 FMARAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPMPRKAIKTKEESDDK 193
           F+ RA +IAD +NE+ELK N  PYR ED+K W+ALPHV G DGRPMPRKAI TK+ESDDK
Sbjct: 131 FLTRAHQIADEINEMELKANSIPYRWEDRKFWQALPHVTGPDGRPMPRKAIITKKESDDK 190

Query: 194 FWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYD----------------- 236
           FWDF +QF FGLWGFRQRPYPPGRPIDVAQAIG+KRLEKRYYD                 
Sbjct: 191 FWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGFKRLEKRYYDCKLGFNLGFVLFVTLCF 250

Query: 237 ---FIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYG 293
               IM++GGWYYKDRLGRTRGP+ELI LKTAWG GIIDKDTFIWG+DMDEW PIHM+YG
Sbjct: 251 VIVVIMKTGGWYYKDRLGRTRGPMELIQLKTAWGGGIIDKDTFIWGDDMDEWAPIHMIYG 310

Query: 294 LEKAIATWEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQ 353
           +E+AIATWEVRLGAAATAFLHKLQKGIPPWVPLKG E+KTYKQ+Q+EA+ES+RRD AVL+
Sbjct: 311 MERAIATWEVRLGAAATAFLHKLQKGIPPWVPLKGREQKTYKQMQQEAVESKRRDLAVLE 370

Query: 354 ANGGVWPGVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVL 413
           ANGG+WPGVRIPSHALFLWASG ELT +LE DHMPN FIPKDLRLQL+KIIPGLRPWEVL
Sbjct: 371 ANGGIWPGVRIPSHALFLWASGPELTNILEQDHMPNIFIPKDLRLQLAKIIPGLRPWEVL 430

Query: 414 SVEQAMDQITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVP 473
           S+EQAMDQITYGG+WYREPLGS+TTGPPYIR WN D+   +++   L T   + L   +P
Sbjct: 431 SIEQAMDQITYGGQWYREPLGSYTTGPPYIRHWNKDVKRILQIFYTLSTRVYSKLQRTIP 490

Query: 474 GFNTIVERLKAENEAKEARREKRMEALIKEKQEK 507
           G +TI+E++  ++ ++ ARR+++ EA +K +QE+
Sbjct: 491 GIDTIMEKVHVDSASRGARRKQKREAQLKAEQEE 524

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449483562|ref|XP_004156625.1| PREDICTED: uncharacterized LOC101207080 [Cucumis sativus]

 Score =  728 bits (1879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/516 (70%), Positives = 425/516 (82%), Gaps = 11/516 (2%)

Query: 1   MASINFNPFENWFNKPTNPLPIINFHSLTESFSFFNPGKPTSNFASISSSLFKRKTPKKP 60
           M SINFNPFENWF+KP NP+P +N  +  +S S  +   P  NFAS S S   RK  K P
Sbjct: 1   MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSP--NFASRSLSNLFRKPKKAP 58

Query: 61  DPETEPQEPGYYKKMLDQYFWECENLPDYRHAPEVEEILKEEPLFEKKENPSEEEIKENE 120
                  EPGYY+KML+Q++WEC+NLPDYRHAPEVE+ILKE+PLFE KENP++EE+++NE
Sbjct: 59  -------EPGYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNE 111

Query: 121 EWWKSFRESPVVQFMARAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPMP 180
           + WK+ R+SPVVQF+ RAEEI    NE++LK+N+ P+R EDK+LWRA+PHV GLDGRPMP
Sbjct: 112 KLWKAIRDSPVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMP 171

Query: 181 RKAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMR 240
           RKAIK+K ESD KFWDF +QF FGLWGFRQRPYPPGRPIDVAQAIGYK LE+RYYDFIMR
Sbjct: 172 RKAIKSKRESDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMR 231

Query: 241 SGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIAT 300
           SGGWYYKDRLGRTRGPLELI LKTAWG GIIDKDTFIWGEDMDEW PIHMVYGLE+AIAT
Sbjct: 232 SGGWYYKDRLGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIAT 291

Query: 301 WEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQANGGVWP 360
           WEVRLGAAATAFLHKLQKGIPPWVP+KGHEKKTYKQLQ+EA+ES+RRD AVL AN GVWP
Sbjct: 292 WEVRLGAAATAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWP 351

Query: 361 GVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMD 420
           GVRIPSHALFLWASG+ELT++LEADHMPNK+IP+DLR +L+KIIPGLRPWEVLSVEQAMD
Sbjct: 352 GVRIPSHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMD 411

Query: 421 QITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIVE 480
            +TY GEW+REPLGS  TGPPYI+EWN DI EF+++   +     + + E V GF  I++
Sbjct: 412 HLTYNGEWHREPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMD 471

Query: 481 RLKAENEAKEARREKRMEALIKEKQEKMDAMVKAKN 516
           ++ A   A+  RR++R  A+  E+ E +    K  N
Sbjct: 472 KVSANITARRIRRKQRKFAM--ERAESLGYDFKKSN 505

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439847|ref|XP_004137697.1| PREDICTED: uncharacterized protein LOC101207080 [Cucumis sativus]

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/500 (71%), Positives = 419/500 (83%), Gaps = 9/500 (1%)

Query: 1   MASINFNPFENWFNKPTNPLPIINFHSLTESFSFFNPGKPTSNFASISSSLFKRKTPKKP 60
           M SINFNPFENWF+KP NP+P +N  +  +S S  +   P  NFAS S S   RK  K P
Sbjct: 1   MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSP--NFASRSLSNLFRKPKKAP 58

Query: 61  DPETEPQEPGYYKKMLDQYFWECENLPDYRHAPEVEEILKEEPLFEKKENPSEEEIKENE 120
                  EPGYY+KML+Q++WEC+NLPDYRHAPEVE+ILKE+PLFE KENP++EE+++NE
Sbjct: 59  -------EPGYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNE 111

Query: 121 EWWKSFRESPVVQFMARAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPMP 180
           + WK+ R+SPVVQF+ RAEEI    NE++LK+N+ P+R EDK+LWRA+PHV GLDGRPMP
Sbjct: 112 KLWKAIRDSPVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMP 171

Query: 181 RKAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMR 240
           RKAIK+K ESD KFWDF +QF FGLWGFRQRPYPPGRPIDVAQAIGYK LE+RYYDFIMR
Sbjct: 172 RKAIKSKRESDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMR 231

Query: 241 SGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIAT 300
           SGGWYYKDRLGRTRGPLELI LKTAWG GIIDKDTFIWGEDMDEW PIHMVYGLE+AIAT
Sbjct: 232 SGGWYYKDRLGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIAT 291

Query: 301 WEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQANGGVWP 360
           WEVRLGAAATAFLHKLQKGIPPWVP+KGHEKKTYKQLQ+EA+ES+RRD AVL AN GVWP
Sbjct: 292 WEVRLGAAATAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWP 351

Query: 361 GVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMD 420
           GVRIPSHALFLWASG+ELT++LEADHMPNK+IP+DLR +L+KIIPGLRPWEVLSVEQAMD
Sbjct: 352 GVRIPSHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMD 411

Query: 421 QITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIVE 480
            +TY GEW+REPLGS  TGPPYI+EWN DI EF+++   +     + + E V GF  I++
Sbjct: 412 HLTYNGEWHREPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMD 471

Query: 481 RLKAENEAKEARREKRMEAL 500
           ++ A   A+  RR++R  A+
Sbjct: 472 KVSANITARRIRRKQRKFAM 491

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571435|ref|XP_002526665.1| conserved hypothetical protein [Ricinus communis] gi|223533965|gb|EEF35687.1| conserved hypothetical protein [Ricinus communis]

 Score =  714 bits (1842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/483 (71%), Positives = 406/483 (84%), Gaps = 8/483 (1%)

Query: 18  NPLPIINFHSLTESFSFFNPGKPTSNFASIS-SSLFKRKTPKKPDPETEPQEPGYYKKML 76
           N LP+I  HSL+   S     +P SNFASIS S+ F +  PKKP+     Q+PGY+++ML
Sbjct: 24  NLLPLI--HSLS---SKTTQQQPPSNFASISISNPFNK--PKKPEQSEADQQPGYWQQML 76

Query: 77  DQYFWECENLPDYRHAPEVEEILKEEPLFEKKENPSEEEIKENEEWWKSFRESPVVQFMA 136
           DQ+F+E ENLPDYRH PEVE IL + P  E+KENP+EEEI+ENE +WK    +PVV+F+A
Sbjct: 77  DQFFYEHENLPDYRHTPEVERILNDHPYLEQKENPTEEEIRENERFWKEIESNPVVKFLA 136

Query: 137 RAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPMPRKAIKTKEESDDKFWD 196
           RAE+I D +NE+ELK N+ PYR ED+K+W+ +P+VIG DGRPMPRKAI+T++ESDDKFWD
Sbjct: 137 RAEQIDDKINEMELKANEIPYRWEDRKMWKNVPNVIGPDGRPMPRKAIRTRKESDDKFWD 196

Query: 197 FMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWYYKDRLGRTRGP 256
           F KQF FGLWGFRQRPYP  RPIDVAQAIGYKRLE+RYYDFIMRSGG+YYKDRLGRTRGP
Sbjct: 197 FAKQFFFGLWGFRQRPYPSSRPIDVAQAIGYKRLEQRYYDFIMRSGGFYYKDRLGRTRGP 256

Query: 257 LELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIATWEVRLGAAATAFLHKL 316
           +ELI LKTAWGAGIIDKDTFIWGEDMDEW PIHM+YG+E+AIATWEVRLGAAATAFLHKL
Sbjct: 257 MELIQLKTAWGAGIIDKDTFIWGEDMDEWAPIHMIYGMERAIATWEVRLGAAATAFLHKL 316

Query: 317 QKGIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQANGGVWPGVRIPSHALFLWASGS 376
           QKGIPPWVPLKG E KTYKQLQ+EA+ES++RD AVL+AN GVWPG RIPSHALFLWASGS
Sbjct: 317 QKGIPPWVPLKGQECKTYKQLQQEAIESKKRDLAVLEANDGVWPGARIPSHALFLWASGS 376

Query: 377 ELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMDQITYGGEWYREPLGSH 436
           ELTT+LEADHMPNK+IPKDLRLQL+KIIPGLRPWEVLSVEQAMDQITYGG+WYREPLGS+
Sbjct: 377 ELTTILEADHMPNKYIPKDLRLQLAKIIPGLRPWEVLSVEQAMDQITYGGQWYREPLGSY 436

Query: 437 TTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIVERLKAENEAKEARREKR 496
           TTGPPYIR WN D+    R    L     N L   +PGF  I+E+++A+ E + ARRE++
Sbjct: 437 TTGPPYIRHWNKDVKRLFRTFYNLSIQVYNKLNRTIPGFEAILEKVQADAEIRNARREEK 496

Query: 497 MEA 499
            +A
Sbjct: 497 RKA 499

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7327818|emb|CAB82275.1| hypothetical protein [Arabidopsis thaliana]

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/533 (64%), Positives = 402/533 (75%), Gaps = 57/533 (10%)

Query: 1   MASINFNPFENWFNKPTNPLPIINFHSLTESFSFFNPGKPTSNFASISSSLFKRKTPKKP 60
           M+S+NFNPF+NWF KP NP+P INF SL +SF    P   + NFASI    F +K+PK  
Sbjct: 1   MSSMNFNPFQNWFEKPPNPVPSINFVSLADSFF---PKSQSPNFASIGLPKFSKKSPK-- 55

Query: 61  DPETE-PQEPGYYKKMLDQYFWECENLPDYRHAPEVEEILKEEPLFEKKENPSEEEIKEN 119
            PET    EPG YK++ +Q+ WECEN+PDYRH PEV+++L E+P+FEKKENPS EEI+  
Sbjct: 56  -PETAGTDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAE 114

Query: 120 EEWWKSFRESPVVQFMARAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPM 179
           ++WW+SFR SPVVQFM RAEEIAD +N++EL+ ND PYR EDK  WRA+PHV G DGRPM
Sbjct: 115 QKWWESFRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPM 174

Query: 180 PRKAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIM 239
           PRKAIK+KEESDDKFWDFMKQF FGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYD+ +
Sbjct: 175 PRKAIKSKEESDDKFWDFMKQFLFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDWSI 234

Query: 240 RSGGWYYK-----------------------------------------DRLGRTRGPLE 258
               W  K                                         DRLGR+RGP E
Sbjct: 235 FKCFWIVKTLPGGYHDSVRGSGFQALVVLNVVKLSKLVPVVELQEYDESDRLGRSRGPCE 294

Query: 259 LITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIATWEVRLGAAATAFLHKLQK 318
           +ITLKTA+GAGIID+DTFIWGEDMDEW PIHMVYGLE AIATWEVRLGAAATAFLHKLQK
Sbjct: 295 IITLKTAYGAGIIDRDTFIWGEDMDEWAPIHMVYGLEPAIATWEVRLGAAATAFLHKLQK 354

Query: 319 GIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQANGGVWPGVRIPSHALFLWASGSEL 378
           GIPPWVPLKG E KTYKQLQ+EA+ES++RD AVL+ANGGVWPGVR PSHALFLWASGSEL
Sbjct: 355 GIPPWVPLKGREPKTYKQLQKEAIESKKRDMAVLEANGGVWPGVRTPSHALFLWASGSEL 414

Query: 379 TTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMDQITYGGEWYREPLGSHTT 438
           TT+LE+DHMP K         L+K+IPGLRPWEV+S+EQAMDQI+YGGEWYREPLG++TT
Sbjct: 415 TTVLESDHMPTK---------LAKVIPGLRPWEVISIEQAMDQISYGGEWYREPLGTYTT 465

Query: 439 GPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIVERLKAENEAKEA 491
           GPPYIREWN  ++   R+   L       L   VPGF+TI+++++ + + + A
Sbjct: 466 GPPYIREWNRSVMRLFRIFYNLSVRVGQKLERTVPGFDTIMDKVQKDYDKRIA 518

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503061|ref|XP_003520330.1| PREDICTED: uncharacterized protein LOC100781480 [Glycine max]

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/519 (63%), Positives = 408/519 (78%), Gaps = 17/519 (3%)

Query: 1   MASINFNPFE-NWFNKPTNPLPIINF-HSLTESFSFFNPGKPTSNFASISSSLFKRKTPK 58
           MASINFNPF  NWF+KP NPL + +  ++LT++ S   P     NFA+IS     R+ PK
Sbjct: 1   MASINFNPFGGNWFSKPPNPLSVPSLPNNLTDAPSSLPP-----NFAAISLPNPFRRRPK 55

Query: 59  KPDPETEPQEPGYYKKMLDQYFWECENLPDYRHAPEVEEIL----------KEEPLFEKK 108
                 EP EPG+Y+++  Q  WECENLPD+RH PEV++IL           ++ +F  +
Sbjct: 56  PKPKPEEPVEPGHYEQLARQVLWECENLPDHRHTPEVDKILADNDAAFGGNNDDSVFVLR 115

Query: 109 ENPSEEEIKENEEWWKSFRESPVVQFMARAEEIADYLNEVELKKNDKPYRPEDKKLWRAL 168
           E+ +EEE++EN E  +  R SPVVQFMARAEEI D +NE+ELK+N++PY  ED ++W+ +
Sbjct: 116 EDATEEEVRENAELVERLRSSPVVQFMARAEEILDKMNEMELKENERPYHKEDWEVWKNV 175

Query: 169 PHVIGLDGRPMPRKAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYK 228
           P+VIGLDGRPMPRKA KT+EE+DDKFWDF +QF FGLW FRQRPYPPG+PID AQ+IGYK
Sbjct: 176 PNVIGLDGRPMPRKAQKTREEADDKFWDFARQFFFGLWNFRQRPYPPGKPIDAAQSIGYK 235

Query: 229 RLEKRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPI 288
            L++RYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDK+TFIWGEDMDEW PI
Sbjct: 236 NLDRRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKNTFIWGEDMDEWAPI 295

Query: 289 HMVYGLEKAIATWEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAMESRRRD 348
           HM+YG+E+AIATWEVRL A+ATA LHKLQKGIPPWVPLKG EKKTYKQLQEEA+ES+RRD
Sbjct: 296 HMIYGMERAIATWEVRLAASATALLHKLQKGIPPWVPLKGFEKKTYKQLQEEAIESKRRD 355

Query: 349 NAVLQANGGVWPGVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLR 408
            AVL+AN G+WPG +IPSHALFLWASGSELTT+LE DHMPNK+IPK LR +L++IIPGLR
Sbjct: 356 LAVLEANDGLWPGAKIPSHALFLWASGSELTTILEQDHMPNKYIPKYLRYKLAEIIPGLR 415

Query: 409 PWEVLSVEQAMDQITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSL 468
           PWEVLSVEQAMD++T+ GEWYREPLGS TTGPPY+  WN D++   ++ D L       +
Sbjct: 416 PWEVLSVEQAMDRLTFNGEWYREPLGSFTTGPPYLEHWNRDVMRLYKIFDDLNNELYEHM 475

Query: 469 LEKVPGFNTIVERLKAENEAKEARREKRMEALIKEKQEK 507
              + GF+ I+E+++ +  A+  +  ++ +   +E ++K
Sbjct: 476 ENSIAGFDKIMEKIRDDFIARTDKLLEKKDKEKREARKK 514

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	523
TAIR|locus:2149735	527	AT5G01590 "AT5G01590" [Arabido	0.906	0.899	0.699	1.4e-188

TAIR|locus:2149735 AT5G01590 "AT5G01590" [Arabidopsis thaliana (taxid:3702)]

 Score = 1828 (648.5 bits), Expect = 1.4e-188, P = 1.4e-188
 Identities = 335/479 (69%), Positives = 385/479 (80%)

Query:     1 MASINFNPFENWFNKPTNPLPIINFHSLTESFSFFNPGKPTSNFASISSSLFKRXXXXXX 60
             M+S+NFNPF+NWF KP NP+P INF SL +SF  F P   + NFASI    F +      
Sbjct:     1 MSSMNFNPFQNWFEKPPNPVPSINFVSLADSF--F-PKSQSPNFASIGLPKFSKKSPKPE 57

Query:    61 XXXXXXXXXGYYKKMLDQYFWECENLPDYRHAPEVEEILKEEPLFXXXXXXXXXXXXXXX 120
                      G YK++ +Q+ WECEN+PDYRH PEV+++L E+P+F               
Sbjct:    58 TAGTDEP--GPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQ 115

Query:   121 XXXXXFRESPVVQFMARAEEIADYLNEVELKKNDKPYRPEDKKLWRALPHVIGLDGRPMP 180
                  FR SPVVQFM RAEEIAD +N++EL+ ND PYR EDK  WRA+PHV G DGRPMP
Sbjct:   116 KWWESFRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMP 175

Query:   181 RKAIKTKEESDDKFWDFMKQFQFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMR 240
             RKAIK+KEESDDKFWDFMKQF FGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIM+
Sbjct:   176 RKAIKSKEESDDKFWDFMKQFLFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMK 235

Query:   241 SGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLEKAIAT 300
             +GGW+YKDRLGR+RGP E+ITLKTA+GAGIID+DTFIWGEDMDEW PIHMVYGLE AIAT
Sbjct:   236 TGGWWYKDRLGRSRGPCEIITLKTAYGAGIIDRDTFIWGEDMDEWAPIHMVYGLEPAIAT 295

Query:   301 WEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQEEAMESRRRDNAVLQANGGVWP 360
             WEVRLGAAATAFLHKLQKGIPPWVPLKG E KTYKQLQ+EA+ES++RD AVL+ANGGVWP
Sbjct:   296 WEVRLGAAATAFLHKLQKGIPPWVPLKGREPKTYKQLQKEAIESKKRDMAVLEANGGVWP 355

Query:   361 GVRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMD 420
             GVR PSHALFLWASGSELTT+LE+DHMPNKFIPK LRL+L+K+IPGLRPWEV+S+EQAMD
Sbjct:   356 GVRTPSHALFLWASGSELTTVLESDHMPNKFIPKQLRLELAKVIPGLRPWEVISIEQAMD 415

Query:   421 QITYGGEWYREPLGSHTTGPPYIREWNVDILEFVRVLDILRTGALNSLLEKVPGFNTIV 479
             QI+YGGEWYREPLG++TTGPPYIREWN  ++   R+   L       L   VPGF+TI+
Sbjct:   416 QISYGGEWYREPLGTYTTGPPYIREWNRSVMRLFRIFYNLSVRVGQKLERTVPGFDTIM 474


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.439    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      523       468   0.00098  118 3  11 22  0.40    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  627 (67 KB)
  Total size of DFA:  321 KB (2160 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  37.22u 0.09s 37.31t   Elapsed:  00:00:01
  Total cpu time:  37.22u 0.09s 37.31t   Elapsed:  00:00:01
  Start:  Thu May  9 21:24:07 2013   End:  Thu May  9 21:24:08 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0009536 "plastid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT5G01590	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast, chloroplast envelope; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; Has 33 Blast hits to 32 proteins in 18 species- Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 2 (source- NCBI BLink). (527 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT5G01660	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (656 aa)							•		0.966
	OSH1	OSH1 (OAS HIGH ACCUMULATION 1); catalytic; thiol reductase in OAS metabolism (233 aa)							•		0.966
	LECRKA4.2	LECRKA4.2 (LECTIN RECEPTOR KINASE A4.1); ATP binding / kinase/ protein kinase/ protein serine/t [...] (688 aa)							•		0.925
	AT5G01480	DC1 domain-containing protein; DC1 domain-containing protein; FUNCTIONS IN- protein binding, zi [...] (413 aa)							•		0.821
	AT1G07080	gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein; gam [...] (265 aa)							•		0.821
	PHR2	PHR2 (photolyase/blue-light receptor 2); DNA photolyase; photolyase/blue light photoreceptor PH [...] (447 aa)				•					0.635
	UBQ5	UBQ5 (ubiquitin 5); protein binding / structural constituent of ribosome; ubiquitin 5 (UBQ5); F [...] (157 aa)							•		0.562
	FTSH12	FTSH12 (FTSH PROTEASE 12); ATP-dependent peptidase/ ATPase/ metallopeptidase; encodes an FtsH p [...] (1008 aa)				•					0.499
	AT2G39670	radical SAM domain-containing protein; radical SAM domain-containing protein; FUNCTIONS IN- iro [...] (431 aa)				•					0.492
	CPN60B	CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding; encodes the beta subunit of the chl [...] (600 aa)				•					0.485

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	523
pfam14237	45	pfam14237, DUF4339, Domain of unknown function (DU	5e-05

>gnl|CDD|206405 pfam14237, DUF4339, Domain of unknown function (DUF4339)

 Score = 40.3 bits (95), Expect = 5e-05
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 244 WYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVP 287
           WYY  R G+  GP  L  L+    +G I  DT +W + M +W P
Sbjct: 2   WYYA-RNGQQAGPFSLEELRQLIASGQITPDTLVWKQGMSDWQP 44

This domain is found in bacteria, archaea and eukaryotes, and is approximately 50 amino acids in length. There are two completely conserved residues (G and W) that may be functionally important. Length = 45

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	523
PF14237	45	DUF4339: Domain of unknown function (DUF4339)	99.42
cd00072	57	GYF GYF domain: contains conserved Gly-Tyr-Phe res	97.07
PF02213	57	GYF: GYF domain; InterPro: IPR003169 The glycine-t	96.32
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	96.12
smart00444	56	GYF Contains conserved Gly-Tyr-Phe residues. Proli	95.61
COG4969	125	PilA Tfp pilus assembly protein, major pilin PilA	91.56

>PF14237 DUF4339: Domain of unknown function (DUF4339)

Probab=99.42  E-value=9.8e-14  Score=101.36  Aligned_cols=45  Identities=40%  Similarity=0.956  Sum_probs=43.6

Q ss_pred             ceEeecCCCCCCCCCchHHHHHHHhcCcccCCcccccCCCCcchhh
Q 041094          243 GWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPI  288 (523)
Q Consensus       243 ~WYYaDr~rq~RGPv~l~tLr~~w~~GIID~dTLVWgEGLdqWvPL  288 (523)
                      .|||.+ +|+++||+++++|++++++|.|+.+||||++||++|.||
T Consensus         1 ~Wy~~~-~g~~~GP~s~~el~~l~~~g~i~~~tlvw~~g~~~W~pl   45 (45)
T PF14237_consen    1 EWYYAR-NGQQQGPFSLEELRQLISSGEIDPDTLVWKEGMSDWKPL   45 (45)
T ss_pred             CEEEeC-CCeEECCcCHHHHHHHHHcCCCCCCCeEeCCChhhceEC
Confidence            599999 999999999999999999999999999999999999986

>cd00072 GYF GYF domain: contains conserved Gly-Tyr-Phe residues; Proline-binding domain in CD2-binding and other proteins

Probab=97.07  E-value=0.00087  Score=52.36  Aligned_cols=50  Identities=20%  Similarity=0.418  Sum_probs=46.9

Q ss_pred             ceEeecCCCCCCCCCchHHHHHHHhcCcccCCcccccC-CCCcchhhhhhh
Q 041094          243 GWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGE-DMDEWVPIHMVY  292 (523)
Q Consensus       243 ~WYYaDr~rq~RGPv~l~tLr~~w~~GIID~dTLVWgE-GLdqWvPL~~V~  292 (523)
                      .|||+|-.|+.|||-+..+|..=+.+|-...+-.|.+. .-.+|.||..+-
T Consensus         3 ~W~Y~d~~g~vqGPF~~~~M~~W~~~gyF~~~l~vr~~~~~~~f~~l~~~~   53 (57)
T cd00072           3 QWFYKDPQGEIQGPFSASQMLQWYQAGYFPDGLQVRRLDNGGEFYTLGDIL   53 (57)
T ss_pred             EEEEECCCCCCcCCcCHHHHHHHHHCCCCCCCeEEEECCCCCCcEEHHHHH
Confidence            59999999999999999999999999999999999999 557999998875

Involved in signaling lymphocyte activity. Also present in other unrelated proteins (mainly unknown) derived from diverse eukaryotic species.

>PF02213 GYF: GYF domain; InterPro: IPR003169 The glycine-tyrosine-phenylalanine (GYF) domain is an around 60-amino acid domain which contains a conserved GP[YF]xxxx[MV]xxWxxx[GN]YF motif

Probab=96.32  E-value=0.0022  Score=49.30  Aligned_cols=47  Identities=26%  Similarity=0.499  Sum_probs=39.4

Q ss_pred             ceEeecCCCCCCCCCchHHHHHHHhcCcccCCcccccCCCCcc-hhhh
Q 041094          243 GWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEW-VPIH  289 (523)
Q Consensus       243 ~WYYaDr~rq~RGPv~l~tLr~~w~~GIID~dTLVWgEGLdqW-vPL~  289 (523)
                      .|||+|..|..+||-+..+|..=+.+|-...+..|++.+-.++ .|+.
T Consensus         2 ~W~Y~d~~g~~qGPf~~~~M~~W~~~gyF~~~l~vr~~~~~~~~~~~~   49 (57)
T PF02213_consen    2 MWYYKDPDGNIQGPFSSEQMQAWYKQGYFPDDLQVRRVDDTQFIDPFG   49 (57)
T ss_dssp             EEEEESTTS-EEEEEEHHHHHHHHHTTSSTTT-EEEETTSTTT--SSC
T ss_pred             EeEEECCCCCcCCCcCHHHHHHHHHCCCCCCCcEEEEecCCCCcccch
Confidence            5999999999999999999999999999999999999976555 4443

It was identified in the human intracellular protein termed CD2 binding protein 2 (CD2BP2), which binds to a site containing two tandem PPPGHR segments within the cytoplasmic region of CD2. Binding experiments and mutational analyses have demonstrated the critical importance of the GYF tripeptide in ligand binding. A GYF domain is also found in several other eukaryotic proteins of unknown function []. It has been proposed that the GYF domain found in these proteins could also be involved in proline-rich sequence recognition []. Resolution of the structure of the CD2BP2 GYF domain by NMR spectroscopy revealed a compact domain with a beta-beta-alpha-beta-beta topology, where the single alpha-helix is tilted away from the twisted, anti-parallel beta-sheet. The conserved residues of the GYF domain create a contiguous patch of predominantly hydrophobic nature which forms an integral part of the ligand-binding site []. There is limited homology within the C-terminal 20-30 amino acids of various GYF domains, supporting the idea that this part of the domain is structurally but not functionally important [].; GO: 0005515 protein binding; PDB: 1SYX_F 1L2Z_A 1GYF_A 1WH2_A 3FMA_C 3K3V_A.

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=96.12  E-value=0.0032  Score=72.64  Aligned_cols=79  Identities=22%  Similarity=0.447  Sum_probs=64.9

Q ss_pred             HHHhcCceEeecCCCCCCCCCchHHHHHHHhcCcccCCcccccCCCCcchhhhhhhhcc-------cccchhhhhhhhhH
Q 041094          237 FIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVYGLE-------KAIATWEVRLGAAA  309 (523)
Q Consensus       237 ~imr~n~WYYaDr~rq~RGPv~l~tLr~~w~~GIID~dTLVWgEGLdqWvPL~~V~gLe-------p~I~T~EVr~aA~~  309 (523)
                      |.|..-.|||.|..|..-||++.+.+|.+|..--||..|-+|--||++|--|+.|..+-       |..+.-+|  +-++
T Consensus       951 ~~~~~~ew~y~dk~~~~vgp~~~~~~~sl~s~k~i~~~s~~~a~gm~~w~~l~~i~~~rw~v~~~ipv~~~s~~--~~~~ 1028 (2235)
T KOG1789|consen  951 EQMAEEEWYYHDKDAKQVGPLSFEKMKSLYTEKTIFEKSQIWAAGMDKWMSLAAVPQFRWTVCQQIPVMNFTDL--SVLC 1028 (2235)
T ss_pred             hhcCchhheeecCCccccCchhHHHHHHHhcccchhHHHHHHHhhhhHHHhhhhhhhhhhhhhhcccccCHHHH--HHHH
Confidence            66778899999999999999999999999999999999999999999999999999754       22233233  3444


Q ss_pred             HHHHhhhh
Q 041094          310 TAFLHKLQ  317 (523)
Q Consensus       310 tAf~hKL~  317 (523)
                      ...||..-
T Consensus      1029 l~~L~~Mc 1036 (2235)
T KOG1789|consen 1029 LDTLLQMC 1036 (2235)
T ss_pred             HHHHHHHH
Confidence            66666654

>smart00444 GYF Contains conserved Gly-Tyr-Phe residues

Probab=95.61  E-value=0.018  Score=44.88  Aligned_cols=50  Identities=20%  Similarity=0.296  Sum_probs=45.3

Q ss_pred             ceEeecCCCCCCCCCchHHHHHHHhcCcccCCcccccCCCCcchhhhhhh
Q 041094          243 GWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIHMVY  292 (523)
Q Consensus       243 ~WYYaDr~rq~RGPv~l~tLr~~w~~GIID~dTLVWgEGLdqWvPL~~V~  292 (523)
                      .|+|+|-.|+.+||-+..+|..=+.+|-...+=.|++.+-.+..||..+.
T Consensus         2 ~W~Y~d~~~~iqGPf~~~~M~~W~~~gyF~~~l~vr~~~~~~~~~l~~~~   51 (56)
T smart00444        2 LWLYKDPDGEIQGPFTASQMSQWYQAGYFPDSLQIKRLNEPPYDTLGDLD   51 (56)
T ss_pred             EEEEECCCCCEeCCcCHHHHHHHHHCCCCCCCeEEEEcCCCCCCcchhhh
Confidence            69999999999999999999999999999999999999888777666554

Proline-binding domain in CD2-binding protein. Contains conserved Gly-Tyr-Phe residues.

>COG4969 PilA Tfp pilus assembly protein, major pilin PilA [Cell motility and secretion / Intracellular trafficking and secretion]

Probab=91.56  E-value=0.064  Score=47.74  Aligned_cols=59  Identities=12%  Similarity=0.101  Sum_probs=48.1

Q ss_pred             HHhCCcccc--eeccchhhhhhhccchhhhHhhhccCCCCCCchHHHHHHHhhcCCCCCcchhhHHHhhhhhhc
Q 041094          353 QANGGVWPG--VRIPSHALFLWASGSELTTMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMDQITY  424 (523)
Q Consensus       353 ~~nggvwpg--v~ipsHalFLWAsGselt~iLaaiamPnkYi~y~~R~klAk~ip~LrP~evlsiEq~MD~ity  424 (523)
                      .++|+-|+.  +.+.            +++||++|++| .|+.|..|.+|..++....|.-....+-++..-.+
T Consensus         3 ~q~GFtLiElmivi~------------Ii~iLaaIaiP-~YQ~y~~k~~v~~al~~~~~~k~~ie~~~ls~~~~   63 (125)
T COG4969           3 KQKGFTLIELMIVLA------------IIAILAAIAIP-LYQNYVARAQVMAALADITPGRTTVEIILLEPGAG   63 (125)
T ss_pred             ccCcceehHHHHHHH------------HHHHHHHhhhh-HHHHHHHHHHHHHHHHhhccchhHHHHHHhccCCC
Confidence            356777877  5566            89999999999 99999999999999999999877666666665444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	523
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 5e-05
 Identities = 45/301 (14%), Positives = 81/301 (26%), Gaps = 81/301 (26%)

Query: 230 LEKRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDE----W 285
           L K   D I+ S     KD +  T      +  K      ++ K  F+  E++      +
Sbjct: 46  LSKEEIDHIIMS-----KDAVSGTLRLFWTLLSK---QEEMVQK--FV--EEVLRINYKF 93

Query: 286 VPIHMVYGLEKAIATWEVRLGAAAT----AFLHKLQKGIPPWVPLKGHEKKTYKQLQEEA 341
                   L   I T E R  +  T        +L      +        + Y +L++  
Sbjct: 94  --------LMSPIKT-EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQAL 144

Query: 342 MESRRRDNAVLQANGGVWPGVRIPSHALFLWASG-SELTTMLEADH-----MPNK----- 390
           +E R   N ++    G                SG + +   +   +     M  K     
Sbjct: 145 LELRPAKNVLIDGVLG----------------SGKTWVALDVCLSYKVQCKMDFKIFWLN 188

Query: 391 ----FIPKDLRLQLSKIIPGLRPWEVLSVEQAMDQITYGGEWYREPLGSHTTGPPYIRE- 445
                 P+ +   L K++  + P    S       I       +  L       PY    
Sbjct: 189 LKNCNSPETVLEMLQKLLYQIDP-NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247

Query: 446 ------WNVDILE-F---VRVL----DILRTGALNSLLEKVPGFNTIVERLKA--ENEAK 489
                  N      F    ++L        T  L++         ++         +E K
Sbjct: 248 LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI---SLDHHSMTLTPDEVK 304

Query: 490 E 490
            
Sbjct: 305 S 305

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 8e-04
 Identities = 36/287 (12%), Positives = 73/287 (25%), Gaps = 90/287 (31%)

Query: 9   FENWFNKPTNPLP-----------------IINFHSLTESFSFFNPGKPTSNFASISSSL 51
              + +     LP                 I +  +  +++   N  K T+    I SSL
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT---IIESSL 363

Query: 52  FKRKTPKKPDPETEPQEPGYYKKMLDQYFWECENLPDYRHAPE-VEEILKEEPLFEKKEN 110
                           EP  Y+    + F      P   H P  +  ++  + +      
Sbjct: 364 -------------NVLEPAEYR----KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMV 406

Query: 111 PSEEEIKEN--EEWWKSFRES-PVVQFMARAEE----------IADYLNEVELKKNDKPY 157
              +  K +  E+  K    S P +    + +           +  Y        +D   
Sbjct: 407 VVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP 466

Query: 158 RPEDKKLWRALP-HVIGLDGRPMPRKAIKTKEESDDKF------WDFMKQFQFGLWGFRQ 210
              D+  +  +  H+  ++             E    F      + F++Q        R 
Sbjct: 467 PYLDQYFYSHIGHHLKNIE-----------HPERMTLFRMVFLDFRFLEQ------KIRH 509

Query: 211 RPYPPGRPIDVAQAIG---------------YKRLEKRYYDFIMRSG 242
                     +   +                Y+RL     DF+ +  
Sbjct: 510 DSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIE 556

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	523
1wh2_A	78	Hypothetical protein AT5G08430; GYF domain, struct	97.41
3k3v_A	100	Protein SMY2; GYF domain, poly-proline binding, do	95.9
3g20_A	123	Type II secretion protein; general secretory pathw	82.48

>1wh2_A Hypothetical protein AT5G08430; GYF domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} SCOP: d.76.1.1

Probab=97.41  E-value=6.2e-05  Score=61.19  Aligned_cols=48  Identities=27%  Similarity=0.398  Sum_probs=45.4

Q ss_pred             CceEeecCCCCCCCCCchHHHHHHHhcCcccCCcccccCCCCcchhhh
Q 041094          242 GGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPIH  289 (523)
Q Consensus       242 n~WYYaDr~rq~RGPv~l~tLr~~w~~GIID~dTLVWgEGLdqWvPL~  289 (523)
                      -.|||+|.+|+.+||.+...|+.=+.+|-...+..||+.|-.+|.++.
T Consensus        18 ~~W~Y~Dp~g~iQGPFs~~~M~~W~~~GyF~~~L~Vrr~~~~~~~~i~   65 (78)
T 1wh2_A           18 LNWLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVWMTGESMESAVL   65 (78)
T ss_dssp             CCEEEECTTSCEEEEECHHHHHHHHTTTSSCSCCEEEETTSCTTSCEE
T ss_pred             CeEEEECCCCCCcCCcCHHHHHHHHHcCCCCCCceEEEeCCCCcceeh
Confidence            489999999999999999999999999999999999999988887765

>3k3v_A Protein SMY2; GYF domain, poly-proline binding, domain SWAP, ragnya, phosphoprotein, protein binding; 1.80A {Saccharomyces cerevisiae} PDB: 3fma_A

Probab=95.90  E-value=0.0039  Score=53.27  Aligned_cols=53  Identities=17%  Similarity=0.309  Sum_probs=48.3

Q ss_pred             cCceEeecCCCCCCCCCchHHHHHHHhcCcccCCcccccCCC--------Ccchhhhhhhh
Q 041094          241 SGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDM--------DEWVPIHMVYG  293 (523)
Q Consensus       241 ~n~WYYaDr~rq~RGPv~l~tLr~~w~~GIID~dTLVWgEGL--------dqWvPL~~V~g  293 (523)
                      .-.|||+|-+|+.|||-+...|..=+.+|-...+=.|||.+=        +.|.+|..+..
T Consensus        15 e~~W~Y~Dp~G~vQGPFs~~~M~~W~~~GYF~~~L~VrR~~~~~~p~g~d~~F~~Lgel~~   75 (100)
T 3k3v_A           15 ESSWRYIDTQGQIHGPFTTQMMSQWYIGGYFASTLQISRLGSTPETLGINDIFITLGELMT   75 (100)
T ss_dssp             CCEEEEECTTSCEEEEEEHHHHHHHHHTTCCCTTCEEEECCSSCCSSSCBTCCEEHHHHHH
T ss_pred             cceEEEECCCCCCcCCcCHHHHHHHHHcCCCCCCceEEEcCCCCCccCCCCceeeHHHHHH
Confidence            457999999999999999999999999999999999999753        38999999874

>3g20_A Type II secretion protein; general secretory pathway, major pilin, protein transport; HET: NHE; 1.78A {Escherichia coli O157} SCOP: d.24.1.3

Probab=82.48  E-value=0.19  Score=43.06  Aligned_cols=37  Identities=14%  Similarity=0.316  Sum_probs=28.6

Q ss_pred             hHhhhccCCCCCCchHHHHHHHhhcCCCCCcchhhHHHhhhhh
Q 041094          380 TMLEADHMPNKFIPKDLRLQLSKIIPGLRPWEVLSVEQAMDQI  422 (523)
Q Consensus       380 ~iLaaiamPnkYi~y~~R~klAk~ip~LrP~evlsiEq~MD~i  422 (523)
                      +||++|++| .|..+..|++.+++...|     .+|++|||+-
T Consensus         1 GILAaIa~P-~~~~~~~kak~~~a~a~l-----~~i~~Ale~Y   37 (123)
T 3g20_A            1 GAMASLVVP-NLMGNKDKADRQKVMSDL-----VALESTLDMY   37 (123)
T ss_dssp             ----CCCCC-CHHHHHHHHHHHHHHHHH-----HHHHHHHHHH
T ss_pred             ChhHHhHHH-HHHHHHHHHHHHHHHHHH-----HHHHHHHHHH
Confidence            699999999 999999999999987654     4889999873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	523
d1wh2a_	78	Hypothetical rotein At5g08430 {Thale cress (Arabid	96.24
d1syxb1	62	GYF domain from cd2bp2 protein {Human (Homo sapien	89.78

>d1wh2a_ d.76.1.1 (A:) Hypothetical rotein At5g08430 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: GYF/BRK domain-like
superfamily: GYF domain
family: GYF domain
domain: Hypothetical rotein At5g08430
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.24  E-value=0.00092  Score=52.75  Aligned_cols=47  Identities=28%  Similarity=0.420  Sum_probs=43.2

Q ss_pred             CceEeecCCCCCCCCCchHHHHHHHhcCcccCCcccccCCCCcchhh
Q 041094          242 GGWYYKDRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMDEWVPI  288 (523)
Q Consensus       242 n~WYYaDr~rq~RGPv~l~tLr~~w~~GIID~dTLVWgEGLdqWvPL  288 (523)
                      -.|||+|-+|+.|||.+..+|+.=+.+|-...+-.||+-|=.++.++
T Consensus        18 ~~W~Y~D~~g~~qGPfs~~~M~~W~~~GyF~~~l~Vrr~g~~~~~~~   64 (78)
T d1wh2a_          18 LNWLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVWMTGESMESAV   64 (78)
T ss_dssp             CCEEEECTTSCEEEEECHHHHHHHHTTTSSCSCCEEEETTSCTTSCE
T ss_pred             eEEEEECCCCCCcCCcCHHHHHHHHHCCCCCCCeEEEECCCCCCccE
Confidence            35999999999999999999999999999999999999888877654

>d1syxb1 d.76.1.1 (B:25-86) GYF domain from cd2bp2 protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: GYF/BRK domain-like
superfamily: GYF domain
family: GYF domain
domain: GYF domain from cd2bp2 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.78  E-value=0.097  Score=39.33  Aligned_cols=47  Identities=17%  Similarity=0.250  Sum_probs=40.6

Q ss_pred             ceEee---cCCCCCCCCCchHHHHHHHhcCcccCCcccccCCCC--cchhhh
Q 041094          243 GWYYK---DRLGRTRGPLELITLKTAWGAGIIDKDTFIWGEDMD--EWVPIH  289 (523)
Q Consensus       243 ~WYYa---Dr~rq~RGPv~l~tLr~~w~~GIID~dTLVWgEGLd--qWvPL~  289 (523)
                      .|+|+   |.+|+.+||-+..+|..-+.+|-...+-.|++-|..  +|....
T Consensus         3 ~WeYkw~~d~~g~iqGPf~~~~M~~W~~~GyF~~~l~vRr~~~~~~~F~~~~   54 (62)
T d1syxb1           3 MWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSK   54 (62)
T ss_dssp             EEEEESSSSSSSCCEEEEEHHHHHHHHHTTSCTTCCEEEESSSTTCCCEEGG
T ss_pred             EEEEecccCCCCCCcCCcCHHHHHHHHHCCCCCCCceEEeCCCCCCCccccc
Confidence            69996   999999999999999999999999999999988754  354443