Citrus Sinensis ID: 041159


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350------
RIANNSLTVYIESSQSQVKRVIRPYPSKLALDYVTPVQIVNGDADHLPACHFIHDVPAVVFSTGGFAGNQFHEFNELIIPLFITSRHFRSQVKFVIIDYKPWWVSKYSNILSLLTRYEVINPAADGNVHCFPAAVIGLKYHGFLSLNSTDIPGGYSMVDFKRFLREAYSLKIKNVSEIQREKPVLIFISRGNSRKFLNEDEMVVMIEELGFQVVVTRPNRMSNLNKFTEVVNSCSVLVGAHGAGLTTELFLPAGAVMVQVVPLGLEWGSTYYFGVPAREMGVQYLEYKTEPEESTLSETYSRDDPIITDPASLFAKDYFAARAVYIDAQNLKINLTRFRQTIVQAMEHIRMSSPLD
ccccccEEEEEEccccccEEEEEccccccccccccEEEEEcccccccccccEEEEccEEEEEEccccccccHHHHHHHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHHHccccccccccccEEEEccEEEEcccccccccccccccccccHHHHHHHHHHHHcccccccccccccccEEEEEEcccccccccHHHHHHHHHHHccEEEEEEccccccHHHHHHHHHcccEEEEEccHHHHHHcccccccEEEEEEccccccccccHHHHHHHccccEEEEEEccccccccccccccccccccccHHHHcccHHHHHHHHcccccEEEEcHHHHHHHHHHHHHHHcccccc
cccccEEEEEEcccccccccccccccHHHHHHcccEEEEEEccccccccccEEccccEEEEEccccccccccccccEEEEEEEEHHHccccEEEEEEcccHHHHHHHHHHHHHHccccEEEccccccEEccccEEEEEEcccccccccccccccccHHHHHHHHHHHHcccccccccccccccEEEEEEccccEEEEcHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHcccEEEEEcccccHcEEEcccccEEEEEEcccHHHHHHHHccccHHHcccEEEEEEEEcccccHHHHccccccccccHHHHHHccHHHHHHHHHccccEEEcHHHHHHHHHHHHHHHHHccccc
RIANNSLTVYIESSQSQVKrvirpypsklaldyvtpvqivngdadhlpachfihdvpavvfstggfagnqfhefneLIIPLFITSRHFRSQVKFVIIDYKPWWVSKYSNILSLLTRyevinpaadgnvhcfPAAVIGlkyhgflslnstdipggysmvDFKRFLREAYSLKIKNVSEIQREKPVLIFISrgnsrkflneDEMVVMIEELGFQVVvtrpnrmsnlnKFTEVVNSCSVLvgahgaglttelflpaGAVMVQVVPLglewgstyyfgvparemGVQYleyktepeestlsetysrddpiitdpaslfAKDYFAARAVYIDAQNLKINLTRFRQTIVQAMEHIRMSSPLD
riannsltvyiessqsqvkrVIRPYPSKLALDYVTPVQIVNGDADHLPACHFIHDVPAVVFSTGGFAGNQFHEFNELIIPLFITSRHFRSQVKFVIIDYKPWWVSKYSNILSLLTRYEVINPAADGNVHCFPAAVIGLKYHGFLSLNSTDIPGGYSMVDFKRFLREAYSLKiknvseiqrekpvlifisrgnsrkfLNEDEMVVMIEELGFQVVVTRPNRMSNLNKFTEVVNSCSVLVGAHGAGLTTELFLPAGAVMVQVVPLGLEWGSTYYFGVPAREMGVQYLEYKTEPEEstlsetysrddpiITDPASLFAKDYFAARAVYIDAQNLKINLTRFRQTIVQAMEHirmsspld
RIANNSLTVYIESSQSQVKRVIRPYPSKLALDYVTPVQIVNGDADHLPACHFIHDVPAVVFSTGGFAGNQFHEFNELIIPLFITSRHFRSQVKFVIIDYKPWWVSKYSNILSLLTRYEVINPAADGNVHCFPAAVIGLKYHGFLSLNSTDIPGGYSMVDFKRFLREAYSLKIKNVSEIQREKPVLIFISRGNSRKFLNEDEMVVMIEELGFQVVVTRPNRMSNLNKFTEVVNSCSVLVGAHGAGLTTELFLPAGAVMVQVVPLGLEWGSTYYFGVPAREMGVQYLEYKTEPEESTLSETYSRDDPIITDPASLFAKDYFAARAVYIDAQNLKINLTRFRQTIVQAMEHIRMSSPLD
********VYI******VKRVIRPYPSKLALDYVTPVQIVNGDADHLPACHFIHDVPAVVFSTGGFAGNQFHEFNELIIPLFITSRHFRSQVKFVIIDYKPWWVSKYSNILSLLTRYEVINPAADGNVHCFPAAVIGLKYHGFLSLNSTDIPGGYSMVDFKRFLREAYSLKIKNVSEIQREKPVLIFISRGNSRKFLNEDEMVVMIEELGFQVVVTRPNRMSNLNKFTEVVNSCSVLVGAHGAGLTTELFLPAGAVMVQVVPLGLEWGSTYYFGVPAREMGVQYLEYK****************PIITDPASLFAKDYFAARAVYIDAQNLKINLTRFRQTIVQAME*********
****NSLT*YIESS**Q**RVIRPYPSKLALDYVTPVQIV****D*LPACHFIHDVPAVVFSTGGFAGNQFHEFNELIIPLFITSRHFRSQVKFVIIDYKPWWVSKYSNILSLLTRYEVINPAADGNVHCFPAAVIGLKYHGFLSLNSTDIPGGYSMVDFKRFLREAYSLK********REKPVLIFISRGNSRKFLNEDEMVVMIEELGFQVVVTRPNRMSNLNKFTEVVNSCSVLVGAHGAGLTTELFLPAGAVMVQVVPLGLEWGSTYYFGVPAREMGVQYLEYKTEPEESTLSETYSRDDPIITDPASLFAKDYFAARAVYIDAQNLKINLTRFRQTIVQAM**********
RIANNSLTVYIESSQSQVKRVIRPYPSKLALDYVTPVQIVNGDADHLPACHFIHDVPAVVFSTGGFAGNQFHEFNELIIPLFITSRHFRSQVKFVIIDYKPWWVSKYSNILSLLTRYEVINPAADGNVHCFPAAVIGLKYHGFLSLNSTDIPGGYSMVDFKRFLREAYSLKIKNVSEIQREKPVLIFISRGNSRKFLNEDEMVVMIEELGFQVVVTRPNRMSNLNKFTEVVNSCSVLVGAHGAGLTTELFLPAGAVMVQVVPLGLEWGSTYYFGVPAREMGVQYLEYKT***********SRDDPIITDPASLFAKDYFAARAVYIDAQNLKINLTRFRQTIVQAMEHIRMSSPLD
****NSLTVYIESSQSQVKRVIRPYPSKLALDYVTPVQIVNGDADHLPACHFIHDVPAVVFSTGGFAGNQFHEFNELIIPLFITSRHFRSQVKFVIIDYKPWWVSKYSNILSLLTRYEVINPAADGNVHCFPAAVIGLKYHGFLSLNSTDIPGGYSMVDFKRFLREAYSLKIKNVSEIQREKPVLIFISRGNSRKFLNEDEMVVMIEELGFQVVVTRPNRMSNLNKFTEVVNSCSVLVGAHGAGLTTELFLPAGAVMVQVVPLGLEWGSTYYFGVPAREMGVQYLEYKTEPEESTLSETYSRDDPIITDPASLFAKDYFAARAVYIDAQNLKINLTRFRQTIVQAMEHIRMS****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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RIANNSLTVYIESSQSQVKRVIRPYPSKLALDYVTPVQIVNGDADHLPACHFIHDVPAVVFSTGGFAGNQFHEFNELIIPLFITSRHFRSQVKFVIIDYKPWWVSKYSNILSLLTRYEVINPAADGNVHCFPAAVIGLKYHGFLSLNSTDIPGGYSMVDFKRFLREAYSLKIKNVSEIQREKPVLIFISRGNSRKFLNEDEMVVMIEELGFQVVVTRPNRMSNLNKFTEVVNSCSVLVGAHGAGLTTELFLPAGAVMVQVVPLGLEWGSTYYFGVPAREMGVQYLEYKTEPEESTLSETYSRDDPIITDPASLFAKDYFAARAVYIDAQNLKINLTRFRQTIVQAMEHIRMSSPLD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query356 2.2.26 [Sep-21-2011]
Q5NDE4 590 Glycosyltransferase-like N/A no 0.679 0.410 0.244 2e-09
Q5NDE3 579 Glycosyltransferase-like N/A no 0.665 0.409 0.242 2e-09
Q5NDE7 578 Glycosyltransferase-like N/A no 0.469 0.288 0.239 4e-07
Q5NDE6 576 Glycosyltransferase-like yes no 0.654 0.404 0.224 6e-07
A0JND3527 EGF domain-specific O-lin yes no 0.592 0.400 0.260 1e-06
Q6GQ23525 EGF domain-specific O-lin N/A no 0.589 0.4 0.272 1e-06
Q08CY9525 EGF domain-specific O-lin no no 0.640 0.434 0.273 2e-06
Q5NDE8 577 Glycosyltransferase-like yes no 0.662 0.409 0.211 3e-06
Q5NDL9527 EGF domain-specific O-lin yes no 0.592 0.400 0.260 5e-06
Q5NDL1527 EGF domain-specific O-lin yes no 0.606 0.409 0.257 6e-06
>sp|Q5NDE4|GTDC2_TAKRU Glycosyltransferase-like domain-containing protein 2 OS=Takifugu rubripes GN=gtdc2 PE=2 SV=1 Back     alignment and function desciption
 Score = 63.9 bits (154), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 24/266 (9%)

Query: 56  VPAVVFSTGGF-AGNQFHEFNELIIPLFITSRHF-RSQVKFVIIDYKPWWVSKYSNILSL 113
           VP V      F   N  H F++ ++P F T + F  S     ++  + W    +  +  L
Sbjct: 148 VPDVTLILNRFNPDNLMHVFHDDLLPAFYTMKQFLDSDEDARLVFMEGWEEGPHFELYRL 207

Query: 114 LTRYEVINPAAD---GNVHCFPAAVIGLK------YHGFLSLNSTD---IPGGYSMVDFK 161
           L+  + +        G + CF  + IGL        +GF+         +  G  +  F 
Sbjct: 208 LSNKQPLLKEQLRNFGKLMCFTKSYIGLSKMTTWYQYGFVQPQGPKANILVSGNEIRHFA 267

Query: 162 RFLREAYSLKI-----KNVSEIQREKP---VLIFISRGNSRKFLNEDEMVVMIEELGFQV 213
           + L E  ++       K+    + EKP    ++  SR  +R  LNE E+++ + +     
Sbjct: 268 KVLMEKMNITRAAGGEKDQGNAEDEKPKDEYIVVFSRSTTRLILNEAELIMALAQEFQMR 327

Query: 214 VVTRPNRMSNLNKFTEVVNSCSVLVGAHGAGLTTELFLPAGAVMVQVVPLGL--EWGSTY 271
           VVT      +     +V++  S+LV  HGA L T LFLP GAV+V++ P  +  +  + Y
Sbjct: 328 VVTVSLEEQSFPSIVQVISGASMLVSMHGAQLITSLFLPPGAVVVELYPFAVNPDQYTPY 387

Query: 272 YFGVPAREMGVQYLEYKTEPEESTLS 297
                   M + Y+ ++   EE+T++
Sbjct: 388 RTLASLPGMDLHYIPWRNTEEENTVT 413





Takifugu rubripes (taxid: 31033)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q5NDE3|GTDC2_TETNG Glycosyltransferase-like domain-containing protein 2 OS=Tetraodon nigroviridis GN=gtdc2 PE=2 SV=1 Back     alignment and function description
>sp|Q5NDE7|GTDC2_XENLA Glycosyltransferase-like domain-containing protein 2 OS=Xenopus laevis GN=gtdc2 PE=2 SV=1 Back     alignment and function description
>sp|Q5NDE6|GTDC2_XENTR Glycosyltransferase-like domain-containing protein 2 OS=Xenopus tropicalis GN=gtdc2 PE=2 SV=1 Back     alignment and function description
>sp|A0JND3|EOGT_BOVIN EGF domain-specific O-linked N-acetylglucosamine transferase OS=Bos taurus GN=EOGT PE=2 SV=1 Back     alignment and function description
>sp|Q6GQ23|EOGT_XENLA EGF domain-specific O-linked N-acetylglucosamine transferase OS=Xenopus laevis GN=eogt PE=2 SV=1 Back     alignment and function description
>sp|Q08CY9|EOGT_XENTR EGF domain-specific O-linked N-acetylglucosamine transferase OS=Xenopus tropicalis GN=eogt PE=2 SV=1 Back     alignment and function description
>sp|Q5NDE8|GTDC2_CHICK Glycosyltransferase-like domain-containing protein 2 OS=Gallus gallus GN=GTDC2 PE=2 SV=1 Back     alignment and function description
>sp|Q5NDL9|EOGT_CANFA EGF domain-specific O-linked N-acetylglucosamine transferase OS=Canis familiaris GN=EOGT PE=2 SV=1 Back     alignment and function description
>sp|Q5NDL1|EOGT_PANTR EGF domain-specific O-linked N-acetylglucosamine transferase OS=Pan troglodytes GN=EOGT PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query356
449503225407 PREDICTED: glycosyltransferase-like doma 0.980 0.857 0.578 1e-120
449459640407 PREDICTED: glycosyltransferase-like doma 0.980 0.857 0.578 1e-120
449484981372 PREDICTED: glycosyltransferase-like doma 0.893 0.854 0.562 1e-105
449526607335 PREDICTED: glycosyltransferase-like doma 0.769 0.817 0.572 9e-92
297737475420 unnamed protein product [Vitis vinifera] 0.707 0.6 0.638 2e-90
225456057 462 PREDICTED: uncharacterized glycosyltrans 0.963 0.742 0.415 9e-77
297824111 498 hypothetical protein ARALYDRAFT_483244 [ 0.969 0.692 0.392 6e-76
255585488 533 glycosyltransferase, putative [Ricinus c 0.839 0.560 0.403 2e-75
224139884444 predicted protein [Populus trichocarpa] 0.952 0.763 0.377 4e-75
317106706 530 JHL06B08.8 [Jatropha curcas] 0.912 0.613 0.386 5e-75
>gi|449503225|ref|XP_004161896.1| PREDICTED: glycosyltransferase-like domain-containing protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 207/358 (57%), Positives = 270/358 (75%), Gaps = 9/358 (2%)

Query: 1   RIANNSLTVYIESSQSQVKR-----VIRPYP---SKLALDYVTPVQIV-NGDADHLPACH 51
           RI N +L  YI ++    +      +I PY     K+ L  VTP+QI+   +   LP C 
Sbjct: 43  RINNTNLEFYISTNNDSQQNNFSPILIHPYARQEDKITLRDVTPLQIIFQPNKTLLPLCQ 102

Query: 52  FIHDVPAVVFSTGGFAGNQFHEFNELIIPLFITSRHFRSQVKFVIIDYKPWWVSKYSNIL 111
           FIH+VP ++FSTGGF GN FHEF+E IIPLFITS HF+++V+F+I D+K WWV KY+ IL
Sbjct: 103 FIHNVPVLIFSTGGFTGNLFHEFDETIIPLFITSYHFQTRVRFLITDHKTWWVQKYNRIL 162

Query: 112 SLLTRYEVINPAADGNVHCFPAAVIGLKYHGFLSLNSTDIPGGYSMVDFKRFLREAYSLK 171
           S L+R+ V+NPA DG+VHCF   VIGLK+H  LSLN+TDIPGGYSM DF+ FLR+ Y+LK
Sbjct: 163 SGLSRFNVVNPAEDGSVHCFNGGVIGLKFHNILSLNNTDIPGGYSMSDFRSFLRQTYNLK 222

Query: 172 IKNVSEIQREKPVLIFISRGNSRKFLNEDEMVVMIEELGFQVVVTRPNRMSNLNKFTEVV 231
           + NVSE+  +KP+++ ISR  SR+F+NE EMV M++E+GF+V+ T P RMSNL+KF+ VV
Sbjct: 223 VNNVSELSGKKPMVMLISRQTSRRFMNEGEMVEMMKEVGFEVMTTTPQRMSNLDKFSSVV 282

Query: 232 NSCSVLVGAHGAGLTTELFLPAGAVMVQVVPLGLEWGSTYYFGVPAREMGVQYLEYKTEP 291
           N CSV++GAHGAGLT E+FL  GAV+VQVVP GL+W STY+FG PA EM +QYLEYK E 
Sbjct: 283 NLCSVIIGAHGAGLTNEVFLANGAVVVQVVPFGLDWPSTYFFGKPAAEMELQYLEYKIEA 342

Query: 292 EESTLSETYSRDDPIITDPASLFAKDYFAARAVYIDAQNLKINLTRFRQTIVQAMEHI 349
           +ES+L + Y  + P+I DP S+FA+ YFA+RA+YID QNLKINLTRFR T++Q  + I
Sbjct: 343 KESSLWDKYGENHPVIRDPESIFAQGYFASRAIYIDEQNLKINLTRFRDTMIQVKKLI 400




Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459640|ref|XP_004147554.1| PREDICTED: glycosyltransferase-like domain-containing protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449484981|ref|XP_004157036.1| PREDICTED: glycosyltransferase-like domain-containing protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449526607|ref|XP_004170305.1| PREDICTED: glycosyltransferase-like domain-containing protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297737475|emb|CBI26676.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225456057|ref|XP_002277670.1| PREDICTED: uncharacterized glycosyltransferase AGO61-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297824111|ref|XP_002879938.1| hypothetical protein ARALYDRAFT_483244 [Arabidopsis lyrata subsp. lyrata] gi|297325777|gb|EFH56197.1| hypothetical protein ARALYDRAFT_483244 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255585488|ref|XP_002533436.1| glycosyltransferase, putative [Ricinus communis] gi|223526710|gb|EEF28943.1| glycosyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224139884|ref|XP_002323324.1| predicted protein [Populus trichocarpa] gi|222867954|gb|EEF05085.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|317106706|dbj|BAJ53206.1| JHL06B08.8 [Jatropha curcas] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query356
TAIR|locus:2062709500 AT2G41640 [Arabidopsis thalian 0.915 0.652 0.391 6.3e-69
TAIR|locus:2082598504 AT3G57380 [Arabidopsis thalian 0.837 0.591 0.417 1.3e-66
TAIR|locus:2076274494 AT3G10320 [Arabidopsis thalian 0.831 0.599 0.4 2e-63
TAIR|locus:2092757384 AT3G18170 [Arabidopsis thalian 0.910 0.843 0.379 1.5e-60
TAIR|locus:2063793452 AT2G03370 [Arabidopsis thalian 0.966 0.761 0.360 1.2e-58
TAIR|locus:2092762470 AT3G18180 [Arabidopsis thalian 0.851 0.644 0.370 1.9e-58
TAIR|locus:2063809455 AT2G03360 [Arabidopsis thalian 0.898 0.703 0.370 4.6e-57
UNIPROTKB|F1SRD5 580 GTDC2 "Uncharacterized protein 0.668 0.410 0.274 5.1e-12
UNIPROTKB|Q5NDF2 580 GTDC2 "Glycosyltransferase-lik 0.668 0.410 0.270 5.4e-11
MGI|MGI:2143424 605 Gtdc2 "glycosyltransferase-lik 0.668 0.393 0.266 7.5e-11
TAIR|locus:2062709 AT2G41640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
 Identities = 134/342 (39%), Positives = 215/342 (62%)

Query:    22 IRPYPSKL---ALDYVTPVQIVNGDADHLP--ACHFIHDVPAVVFSTGGFAGNQFHEFNE 76
             I+PY  K     +D V  + ++  D++      C   HDVPAV FSTGG+ GN +HEFN+
Sbjct:   142 IKPYTRKWETSVMDTVQELNLITKDSNKSSDRVCDVYHDVPAVFFSTGGYTGNVYHEFND 201

Query:    77 LIIPLFITSRHFRSQVKFVIIDYKPWWVSKYSNILSLLTRYEVINPAADGNVHCFPAAVI 136
              IIPLFITS+H+  +V FVI++Y  WW  KY +++S L+ Y +++   D   HCF  A +
Sbjct:   202 GIIPLFITSQHYNKKVVFVIVEYHDWWEMKYGDVVSQLSDYPLVDFNGDTRTHCFKEATV 261

Query:   137 GLKYHGFLSLNSTDIPGGYSMVDFKRFLREAYSLKIKNVSEIQRE----------KPVLI 186
             GL+ H  L++NS+ + G  ++VDF+  L   YS +I+++++ + E          KP L+
Sbjct:   262 GLRIHDELTVNSSLVIGNQTIVDFRNVLDRGYSHRIQSLTQEETEANVTALDFKKKPKLV 321

Query:   187 FISR-GNSRKFLNEDEMVVMIEELGFQVVVTRPNRMSNLNKFTEVVNSCSVLVGAHGAGL 245
              +SR G+SR  LNE+ +V + E+ GF V V RP + + + K    +N+  V++G HGA +
Sbjct:   322 ILSRNGSSRAILNENLLVELAEKTGFNVEVLRPQKTTEMAKIYRSLNTSDVMIGVHGAAM 381

Query:   246 TTELFLPAGAVMVQVVPLGLEWGSTYYFGVPAREMGVQYLEYKTEPEESTLSETYSRDDP 305
             T  LFL    V +Q++PLG +W +  Y+G PA+++G++Y+ YK  P+ES+L E Y +DDP
Sbjct:   382 THFLFLKPKTVFIQIIPLGTDWAAETYYGEPAKKLGLKYVGYKIAPKESSLYEEYGKDDP 441

Query:   306 IITDPASLFAKDYFAARAVYIDAQNLKINLTRFRQTIVQAME 347
             +I DP SL  K +   + +Y+  QN+K++L RFR+T+ ++ +
Sbjct:   442 VIRDPDSLNDKGWEYTKKIYLQGQNVKLDLRRFRETLTRSYD 483




GO:0005576 "extracellular region" evidence=ISM
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA
GO:0010200 "response to chitin" evidence=RCA
TAIR|locus:2082598 AT3G57380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076274 AT3G10320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092757 AT3G18170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063793 AT2G03370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092762 AT3G18180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063809 AT2G03360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1SRD5 GTDC2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q5NDF2 GTDC2 "Glycosyltransferase-like domain-containing protein 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2143424 Gtdc2 "glycosyltransferase-like domain containing 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
pfam04577206 pfam04577, DUF563, Protein of unknown function (DU 1e-14
COG4421368 COG4421, COG4421, Capsular polysaccharide biosynth 2e-05
>gnl|CDD|218156 pfam04577, DUF563, Protein of unknown function (DUF563) Back     alignment and domain information
 Score = 71.3 bits (175), Expect = 1e-14
 Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 14/136 (10%)

Query: 154 GYSMVDFKRFLREAYSLKIKNVSEIQREKPVLIFISRGNS--RKFLNEDEMVVMIEELGF 211
            +    +   L       ++    + + KP  ++ISR  +  R+ LNEDE+   + + GF
Sbjct: 73  PFPAGGYFGPLLPRLRDLLRERFNLSKIKPRKVYISRKKAGRRRILNEDELEEALPKYGF 132

Query: 212 QVVVTRPNRMSNLNKFTEVV---NSCSVLVGAHGAGLTTELFLPAGAVMVQVVPLGLEWG 268
           ++V   P  +S      E V   +S  V+VG HG+ LT  +F+P G  +V++VP      
Sbjct: 133 EIV--DPETLS----LEEQVKLFSSAKVIVGPHGSALTNLIFMPPGTGVVELVPPN--RL 184

Query: 269 STYYFGVPAREMGVQY 284
              +  + A  +G+ Y
Sbjct: 185 DPSFRNL-AALLGLDY 199


Family of uncharacterized proteins. Length = 206

>gnl|CDD|226845 COG4421, COG4421, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 356
KOG4698475 consensus Uncharacterized conserved protein [Funct 100.0
PF04577206 DUF563: Protein of unknown function (DUF563); Inte 99.97
COG4421368 Capsular polysaccharide biosynthesis protein [Carb 99.82
cd05212140 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom 92.09
PRK14178279 bifunctional 5,10-methylene-tetrahydrofolate dehyd 83.16
PF02882160 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl 82.0
>KOG4698 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=1.4e-69  Score=534.32  Aligned_cols=350  Identities=37%  Similarity=0.666  Sum_probs=326.1

Q ss_pred             CCCCCceEEEEEeCC-----CCceeeecCCCccc---ccCCCccEEEecCCCCCCCCceeeeeCceEEEEcCCCCCCchh
Q 041159            1 RIANNSLTVYIESSQ-----SQVKRVIRPYPSKL---ALDYVTPVQIVNGDADHLPACHFIHDVPAVVFSTGGFAGNQFH   72 (356)
Q Consensus         1 r~~~~~~~~~~~~~~-----~~~~~~i~py~rk~---~m~~~~e~~~~~~~~~~~~~C~~~~~~Pavv~~~~gy~~N~~H   72 (356)
                      |+||.++|+++..+.     .+.+|+||||+|||   +|+.|+|+++.........+|+++|++||++|++|||++|.||
T Consensus       105 r~h~~~~~~~~~~~~~~~~s~~~~e~ikpy~rk~~~~vmp~vre~~l~~~~~~~~r~c~v~~~~pa~vfs~Gg~tgn~yh  184 (475)
T KOG4698|consen  105 RTHPDSSTVLLTLGRLLTFSGRLVEKIKPYTRKGETWVMPEVRELNLLVRPGSEIRRCDVNHEVPAIVFSTGGYTGNEYH  184 (475)
T ss_pred             ccCcchhhhhhhccchhhhccccchhcccccccccccccccccccceEEcCCcccceeeeecccchheeecCCcchhhHH
Confidence            789999999887763     35899999999999   9999999999955556678999999999999999999999999


Q ss_pred             hhhHhHHHHHHHhh--hcCCcceEEEecCCcchhhhHHHHHHhhcCCccccCCCCCCeeeecceEEeecccCCCccCCCC
Q 041159           73 EFNELIIPLFITSR--HFRSQVKFVIIDYKPWWVSKYSNILSLLTRYEVINPAADGNVHCFPAAVIGLKYHGFLSLNSTD  150 (356)
Q Consensus        73 ~~~D~liplf~t~~--~~~~~v~lvi~d~~~~w~~~y~~ll~~ls~~~ii~l~~~~~~~CF~~~ivgl~~~~~l~~dp~~  150 (356)
                      +|+|+++|||++.+  .|++++++++++..+||..+|.+++++||+||+++++.+..+|||++++|||..|.++.++|..
T Consensus       185 df~d~~ipL~it~~~~~~n~ev~~li~~~~~ww~~kf~Dvv~~lSn~~~v~~~~~~~ThcF~~~~vgL~~h~~y~v~~t~  264 (475)
T KOG4698|consen  185 DFNDGIIPLFITEAELRFNKEVQFLITETHSWWDMKFGDVVRQLSNYPVVDFDAELRTHCFKEAIVGLVSHFPYAVNPTQ  264 (475)
T ss_pred             HHHhhhhhhhcccchhcccccEEEEEEEcchhhhhhHHHHHHhcCCCceEEecCCceEEEeeeeeeeeeecccccccCCc
Confidence            99999999999999  7899999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CCCC--CcHHHHHHHHHHHhCCCcc--Cc-ccccCCCcEEEEEEcCCCccccCHHHHHHHHHHcCCEEEEEcCCCCCCHH
Q 041159          151 IPGG--YSMVDFKRFLREAYSLKIK--NV-SEIQREKPVLIFISRGNSRKFLNEDEMVVMIEELGFQVVVTRPNRMSNLN  225 (356)
Q Consensus       151 ~~~~--~~i~~F~~~l~~~~~l~~~--~~-~~~~~~~pr~~~i~R~~~R~i~N~~ev~~~l~~~gf~v~~~~~~~~~~~~  225 (356)
                      .+++  .++.+|++++..+|+....  .. .+.+.++||+++++|.++|.|+|++||.++++..||+|.++++++ +++.
T Consensus       265 ~~~~~~~s~~~fr~~l~~a~~~~i~~~~~t~~~~~kkpri~~lsR~~~r~Ilne~el~~~~~~~gf~v~~~~~~~-t~v~  343 (475)
T KOG4698|consen  265 PPPNGTLSMLDFRNLLDKALSPRIPEANVTAPEPWKKPRITILSRAGSRAILNEDELPRMLEDIGFEVSVLRPDR-TEVA  343 (475)
T ss_pred             CCCccccccccHHHHHHHHhcccccccccCCcChhhCCceEEEecccchhhhcchhhhHHHHhCCCceEEecccc-cchh
Confidence            7765  7999999999999976331  11 233456799999999999999999999999999999999999986 9999


Q ss_pred             HHHHHHhcCCEEEEeehhhhhhhcccCCCcEEEEEecCC-CcCCCCCchHHHHhhcCCeEEEEEecCCCCcccccCCCCC
Q 041159          226 KFTEVVNSCSVLVGAHGAGLTTELFLPAGAVMVQVVPLG-LEWGSTYYFGVPAREMGVQYLEYKTEPEESTLSETYSRDD  304 (356)
Q Consensus       226 eq~~~~~~advlvg~HGAgLtn~lF~~pgs~viEi~P~~-~~~~~~~~y~~lA~~~gl~Y~~y~~~~~essl~~~~~~~~  304 (356)
                      +|+++.+++|||+|+|||||||++|+||++.+|||.|.| .+|.+..+|..+|+.|+++|.+|++.++||+|.++|+.|+
T Consensus       344 ~~~~i~~s~~vmiGvHGa~lth~lfl~~~~~~iqi~pcg~~~w~a~~a~~~p~k~~~l~y~~ykI~~~es~l~~~y~~d~  423 (475)
T KOG4698|consen  344 KQLRITNSSDVMIGVHGAGLTHLLFLPPWAGVIQIYPCGDPGWAAKLARLRPAKYMTLEYAEYKIRAEESELYHKYGGDN  423 (475)
T ss_pred             hhhheeeccceeeeccCccceeEEecCCcceEEEEEECCCccchhhhhhccccceeccccceeEEeecccceeeeccCCC
Confidence            999999999999999999999999999999999999999 8999999999999999999999999999999999999999


Q ss_pred             CcccCCCCccchhhHHHH-hhhcCCccEEEehHHHHHHHHHHHHHhhh
Q 041159          305 PIITDPASLFAKDYFAAR-AVYIDAQNLKINLTRFRQTIVQAMEHIRM  351 (356)
Q Consensus       305 ~~~~dP~~~~~~gw~~~~-~~yl~~qnv~vd~~~f~~~L~~a~~~l~~  351 (356)
                      +++.||.|..++||..++ .+|+..|+|++|+.||++.+.+|++....
T Consensus       424 ~~v~dp~s~~~~~f~~~k~~~yl~~q~v~ld~nRf~~~~~~a~~~~~~  471 (475)
T KOG4698|consen  424 TIVFDPISFQKKGFEETKKKVYLELQAVRLDINRFRKTLVKAYLKEIT  471 (475)
T ss_pred             ceecccceeccccceeeeeeeeEeEeeeehhhhhcccchhHHHHHHHH
Confidence            999999999999999888 89999999999999999999999977654



>PF04577 DUF563: Protein of unknown function (DUF563); InterPro: IPR007657 This is a family of uncharacterised glycosyltransferases belonging to glycosyltransferase family 61 Back     alignment and domain information
>COG4421 Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query356
d1gdha2129 D-glycerate dehydrogenase {Hyphomicrobium methylov 84.83
d2bona1 295 Lipid kinase YegS {Escherichia coli [TaxId: 562]} 80.58
>d1gdha2 c.23.12.1 (A:2-100,A:292-321) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Formate/glycerate dehydrogenase catalytic domain-like
family: Formate/glycerate dehydrogenases, substrate-binding domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=84.83  E-value=2  Score=33.05  Aligned_cols=92  Identities=11%  Similarity=0.203  Sum_probs=64.9

Q ss_pred             CcEEEEEEcCCCccccCHHHHHHHHHHcCCEEEEEcCCCCCCHHHHHHHHhcCCEEEEeehhhhhhhcc--cCCCcEEEE
Q 041159          182 KPVLIFISRGNSRKFLNEDEMVVMIEELGFQVVVTRPNRMSNLNKFTEVVNSCSVLVGAHGAGLTTELF--LPAGAVMVQ  259 (356)
Q Consensus       182 ~pr~~~i~R~~~R~i~N~~ev~~~l~~~gf~v~~~~~~~~~~~~eq~~~~~~advlvg~HGAgLtn~lF--~~pgs~viE  259 (356)
                      |||+++ .+    .+  .++.++.+++. |+++....+..++-+|.++...++|++|...+..++.-+|  +|++-.+|-
T Consensus         1 K~kVli-t~----~~--~~~~~~~l~~~-~~v~~~~~~~~~s~~el~~~~~~~d~ii~~~~~~i~~~~l~~~~~~LK~I~   72 (129)
T d1gdha2           1 KKKILI-TW----PL--PEAAMARARES-YDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIPENIKCIS   72 (129)
T ss_dssp             CCEEEE-SS----CC--CHHHHHHHHTT-SEEEECCSTTCCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHSCTTCCEEE
T ss_pred             CCEEEE-eC----CC--CHHHHHHHHcC-CcEEEeCCCCCCCHHHHHHHhcCCCEEEEcCCchhhhHHHhhhhhcceeee
Confidence            567654 32    22  44677778764 5877654444588899999999999999888888999999  566778887


Q ss_pred             EecCCCcCCCCCchHHHHhhcCCeEE
Q 041159          260 VVPLGLEWGSTYYFGVPAREMGVQYL  285 (356)
Q Consensus       260 i~P~~~~~~~~~~y~~lA~~~gl~Y~  285 (356)
                      -+.-|+++.   . -..|+..|+.-.
T Consensus        73 ~~gvG~d~I---D-~~~a~~~gI~V~   94 (129)
T d1gdha2          73 TYSIGFDHI---D-LDACKARGIKVG   94 (129)
T ss_dssp             EESSCCTTB---C-HHHHHHTTCEEE
T ss_pred             ecccCCccc---c-HHHHHhCCCEEE
Confidence            777775432   2 345677887754



>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Back     information, alignment and structure