Citrus Sinensis ID: 041217

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380---
MACKTMILFLLLLFCLPLNLHCTSSTSWIKGGYWTSRSELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSSFTNTVKRKNPSVVTLLSIRGGTAIFSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGVLPSKSTNMTNLGILFDEWRAEVTSEARNSGNSQLLLVMKSHHLPAIDSVTYPIDSMLRNLDWVHVRAYDYYLPSRDNFTGAHSALYSSSSWFNTNDSIREWLKTGFPANKLVLGLPYHGYAWQLVNPNENAVGAPAAGPAITMDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSGKNWINFDGAEAITAKVSFAKEKGLLGYNAFQLSNDDKWELSLAGMQLLITYNSYDQSFSTKRSFEL
ccHHHHHHHHHHHHHccccEEEEEccccEEEEEEcccccccccccccccccEEEEEEEEEEcccEEEEEccccHHHHHHHHHHHHHHccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHcccccccEEEEcccccccEEEccccccccccccccccccccccccHHHHHHHHHHccccEEEEEccccEEEEEEEccEEEEEccHHHHHHHHHHHHHccccEEEEEEccccccccccccccccccccccccccccccccccc
cHHHHHHHHHHHHcccccEEEEEEEccHHHHHccccccccccccccccHccEEEEEEEEcccccEEEEcccccHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHccHHHHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHccccHHEEEEEccccccEEEEEcccccccccccccccccHccHHEHHHHHHHHHcccccEEEEEcccccccEEEcccEEEccccHHHHHHHHHHHHHccccEEEEEEEEccccccccccccHHHHHHHHHHccccccccccc
MACKTMILFLLLLFClplnlhctsstswikggywtsrselpvsqinsgLFTHLTCAFAYLNSSTFTLYINSTYEKSFssftntvkrknpsVVTLLSIRGGTAIFSSMvnqssnrksFIESSIETARLYGfqgldlsgvlpskstnmtnlgILFDEWRAEVTSEARNSGNSQLLLVMKshhlpaidsvtyPIDSMLRNLDWVHVRAydyylpsrdnftgahsalysssswfntNDSIREWLKtgfpanklvlglpyhgyawqlvnpnenavgapaagpaitmdgsmgyKSIKAFIRDYGYGvaslyndsydvnffssgknwinfdgaEAITAKVSFAKekgllgynafqlsnddKWELSLAGMQLLITYNsydqsfstkrsfel
MACKTMILFLLLLFCLPLNLHCTSSTSWIKGGYWTSRSELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSsftntvkrknpSVVTLLSIRGGTAIfssmvnqssnRKSFIESSIETARLYGFQGLDLSGVLPSKSTNMTNLGILFDEWRAEVTSEARNSGNSQLLLVMKSHHLPAIDSVTYPIDSMLRNLDWVHVRAYDYYLPSRDNFTGAHSALYSSSSWFNTNDSIREWLKTGFPANKLVLGLPYHGYAWQLVNPNENAVGAPAAGPAITMDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSGKNWINFDGAEAITAKVSFAKEKGLLGYNAFQLSNDDKWELSLAGMQLLITYnsydqsfstkrsfel
MACKTMIlfllllfclplnlHCTSSTSWIKGGYWTSRSELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSSFTNTVKRKNPSVVTLLSIRGGTAIFSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGVLPSKSTNMTNLGILFDEWRAEVTSEARNSGNSQLLLVMKSHHLPAIDSVTYPIDSMLRNLDWVHVRAYDYYLPSRDNFTGAHSALYSSSSWFNTNDSIREWLKTGFPANKLVLGLPYHGYAWQLVNPNENAVGAPAAGPAITMDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSGKNWINFDGAEAITAKVSFAKEKGLLGYNAFQLSNDDKWELSLAGMQLLITYNSYDQSFSTKRSFEL
**CKTMILFLLLLFCLPLNLHCTSSTSWIKGGYWTSRSELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSSFTNTVKRKNPSVVTLLSIRGGTAIFSSMV********FIESSIETARLYGFQGLDLSGVLPSKSTNMTNLGILFDEWRAEVTS*******SQLLLVMKSHHLPAIDSVTYPIDSMLRNLDWVHVRAYDYYLPSRDNFTGAHSALYSSSSWFNTNDSIREWLKTGFPANKLVLGLPYHGYAWQLVNPNENAVGAPAAGPAITMDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSGKNWINFDGAEAITAKVSFAKEKGLLGYNAFQLSNDDKWELSLAGMQLLITYNSY************
*ACKTMILFLLLLFCLPLNLHCTSSTSWIKGGYWTSRSELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSSFTNTVKRKNPSVVTLLSIRGGTAIFSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGVLPSKSTNMTNLGILFDEWRAEVTSEARNSGNSQLLLVMKSHHLPAIDSVTYPIDSMLRNLDWVHVRAYDYYLPSRDNFTGAHSALYSSSSWFNTNDSIREWLKTGFPANKLVLGLPYHGYAWQLVNPNENAVGAPAAGPAITMDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSGKNWINFDGAEAITAKVSFAKEKGLLGYNAFQLSNDDKWELSLAGMQLLIT****************
MACKTMILFLLLLFCLPLNLHCTSSTSWIKGGYWTSRSELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSSFTNTVKRKNPSVVTLLSIRGGTAIFSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGVLPSKSTNMTNLGILFDEWRAEVTSEARNSGNSQLLLVMKSHHLPAIDSVTYPIDSMLRNLDWVHVRAYDYYLPSRDNFTGAHSALYSSSSWFNTNDSIREWLKTGFPANKLVLGLPYHGYAWQLVNPNENAVGAPAAGPAITMDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSGKNWINFDGAEAITAKVSFAKEKGLLGYNAFQLSNDDKWELSLAGMQLLITYNSYDQS*********
MACKTMILFLLLLFCLPLNLHCTSSTSWIKGGYWTSRSELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSSFTNTVKRKNPSVVTLLSIRGGTAIFSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGVLPSKSTNMTNLGILFDEWRAEVTSEARNSGNSQLLLVMKSHHLPAIDSVTYPIDSMLRNLDWVHVRAYDYYLPSRDNFTGAHSALYSSSSWFNTNDSIREWLKTGFPANKLVLGLPYHGYAWQLVNPNENAVGAPAAGPAITMDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSGKNWINFDGAEAITAKVSFAKEKGLLGYNAFQLSNDDKWELSLAGMQLLITYNSYDQS*********
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MACKTMILFLLLLFCLPLNLHCTSSTSWIKGGYWTSRSELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSSFTNTVKRKNPSVVTLLSIRGGTAIFSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGVLPSKSTNMTNLGILFDEWRAEVTSEARNSGNSQLLLVMKSHHLPAIDSVTYPIDSMLRNLDWVHVRAYDYYLPSRDNFTGAHSALYSSSSWFNTNDSIREWLKTGFPANKLVLGLPYHGYAWQLVNPNENAVGAPAAGPAITMDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSGKNWINFDGAEAITAKVSFAKEKGLLGYNAFQLSNDDKWELSLAGMQLLITYNSYDQSFSTKRSFEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query383 2.2.26 [Sep-21-2011]
Q13231466 Chitotriosidase-1 OS=Homo yes no 0.817 0.671 0.301 1e-32
Q95M17472 Acidic mammalian chitinas yes no 0.791 0.641 0.318 2e-32
Q9D7Q1464 Chitotriosidase-1 OS=Mus yes no 0.783 0.646 0.297 5e-32
Q6RY07473 Acidic mammalian chitinas no no 0.892 0.723 0.299 1e-31
Q91XA9473 Acidic mammalian chitinas no no 0.785 0.636 0.306 2e-31
P36222383 Chitinase-3-like protein no no 0.913 0.913 0.289 6e-30
Q11174 617 Probable endochitinase OS yes no 0.843 0.523 0.277 6e-30
Q5RBP6410 Chitinase-3-like protein yes no 0.804 0.751 0.310 5e-29
Q9WTV1381 Chitinase-3-like protein no no 0.869 0.874 0.291 4e-28
Q29411383 Chitinase-3-like protein no no 0.885 0.885 0.293 4e-28
>sp|Q13231|CHIT1_HUMAN Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1 Back     alignment and function desciption
 Score =  140 bits (354), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 172/351 (49%), Gaps = 38/351 (10%)

Query: 26  TSWIKGGYWTSRSELPVSQINSGLFTHLTCAFAYLNSSTF--TLYINSTYEKSFSSFTNT 83
           T+W +  Y    +      ++  L THL  AFA + +     T + + T  + F    N 
Sbjct: 29  TNWAQ--YRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLSTTEWNDETLYQEF----NG 82

Query: 84  VKRKNPSVVTLLSIRG---GTAIFSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGVLP 140
           +K+ NP + TLL+I G   GT  F+ MV  ++NR++F+ S+I   R Y F GLDL    P
Sbjct: 83  LKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYP 142

Query: 141 ----SKSTNMTNLGILFDEWRAEVTSEARNSGNSQLLLVMKSHHLPAIDS---VTYPIDS 193
               S + +      L  +       EA+ SG  +LLL   S  +PA  +     Y +D 
Sbjct: 143 GSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLL---SAAVPAGQTYVDAGYEVDK 199

Query: 194 MLRNLDWVHVRAYDYYLPSRDNFTGAHSALYS------SSSWFNTNDSIREWLKTGFPAN 247
           + +NLD+V++ AYD++  S +  TG +S LY       +++  N + ++++WL+ G PA+
Sbjct: 200 IAQNLDFVNLMAYDFH-GSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPAS 258

Query: 248 KLVLGLPYHGYAWQLVNPNENAVGAPA-----AGPAITMDGSMGYKSIKAFIRDYGYGVA 302
           KL+LG+P +G ++ L + ++  VGAPA      GP     G + Y  + ++      G  
Sbjct: 259 KLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSW-----KGAT 313

Query: 303 SLYNDSYDVNFFSSGKNWINFDGAEAITAKVSFAKEKGLLGYNAFQLSNDD 353
                   V +      W+ FD  E+   KVS+ K+KGL G   + L  DD
Sbjct: 314 KQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 364
Degrades chitin, chitotriose and chitobiose. May participate in the defense against nematodes and other pathogens. Isoform 3 has no enzymatic activity.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4
>sp|Q95M17|CHIA_BOVIN Acidic mammalian chitinase OS=Bos taurus GN=CHIA PE=1 SV=1 Back     alignment and function description
>sp|Q9D7Q1|CHIT1_MOUSE Chitotriosidase-1 OS=Mus musculus GN=Chit1 PE=1 SV=2 Back     alignment and function description
>sp|Q6RY07|CHIA_RAT Acidic mammalian chitinase OS=Rattus norvegicus GN=Chia PE=2 SV=1 Back     alignment and function description
>sp|Q91XA9|CHIA_MOUSE Acidic mammalian chitinase OS=Mus musculus GN=Chia PE=1 SV=2 Back     alignment and function description
>sp|P36222|CH3L1_HUMAN Chitinase-3-like protein 1 OS=Homo sapiens GN=CHI3L1 PE=1 SV=2 Back     alignment and function description
>sp|Q11174|CHIT_CAEEL Probable endochitinase OS=Caenorhabditis elegans GN=cht-1 PE=1 SV=1 Back     alignment and function description
>sp|Q5RBP6|CH3L1_PONAB Chitinase-3-like protein 1 OS=Pongo abelii GN=CHI3L1 PE=2 SV=1 Back     alignment and function description
>sp|Q9WTV1|CH3L1_RAT Chitinase-3-like protein 1 OS=Rattus norvegicus GN=Chi3l1 PE=2 SV=3 Back     alignment and function description
>sp|Q29411|CH3L1_PIG Chitinase-3-like protein 1 OS=Sus scrofa GN=CHI3L1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query383
224142429375 predicted protein [Populus trichocarpa] 0.939 0.96 0.557 1e-118
359497679359 PREDICTED: chitotriosidase-1-like [Vitis 0.926 0.988 0.574 1e-113
359497026 738 PREDICTED: G-type lectin S-receptor-like 0.926 0.481 0.565 1e-113
359484771 781 PREDICTED: G-type lectin S-receptor-like 0.869 0.426 0.567 1e-108
356558668 909 PREDICTED: uncharacterized protein LOC10 0.939 0.396 0.513 1e-102
255565055 721 conserved hypothetical protein [Ricinus 0.866 0.460 0.536 1e-101
296088199 1130 unnamed protein product [Vitis vinifera] 0.848 0.287 0.527 1e-100
224142425 763 predicted protein [Populus trichocarpa] 0.945 0.474 0.514 1e-96
5814093 739 receptor-like kinase CHRK1 [Nicotiana ta 0.879 0.456 0.493 6e-94
15235200379 Glycosyl hydrolase family protein with c 0.966 0.976 0.426 1e-79
>gi|224142429|ref|XP_002324560.1| predicted protein [Populus trichocarpa] gi|222865994|gb|EEF03125.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/375 (55%), Positives = 273/375 (72%), Gaps = 15/375 (4%)

Query: 1   MACKTMILFLLLLFCLPLNLHCTSSTSWIKGGYWTSRSELPVSQINSGLFTHLTCAFAYL 60
           MA +  I+ L     L     C+ +  WIK GYW   S+ P+  INS LFTHL CAFA +
Sbjct: 1   MAIRNTIILLFSFAFLSSQNRCSVAQKWIKAGYWYGGSDFPIPDINSALFTHLLCAFANV 60

Query: 61  NSSTFTLYINSTYEKSFSSFTNTVKRKNPSVVTLLSIRGGTA--------------IFSS 106
           NSST+ L I S ++++FS FT  VKRKNPS+VTLLSI  G A              + SS
Sbjct: 61  NSSTYELSIPSDFQQNFSIFTGIVKRKNPSIVTLLSIWNGQAETYKSIIGEAVNSSVLSS 120

Query: 107 MVNQSSNRKSFIESSIETARLYGFQGLDLSGVLPSKSTNMTNLGILFDEWRAEVTSEARN 166
           M+ QSS RKSFIESS++TAR  GFQG+DL  + P+ ST+++N+G L DEWRA V SE RN
Sbjct: 121 MLTQSSYRKSFIESSVKTARTLGFQGIDLFWLWPN-STDLSNIGTLLDEWRATVDSEPRN 179

Query: 167 SGNSQLLLVMKSHHLPAIDSVTYPIDSMLRNLDWVHVRAYDYYLPSRDNFTGAHSALYSS 226
           S  S+L+L M   + P++ SV+YPI+SM RNLDW HV AYDY++PSR+NFTG H+ALY+ 
Sbjct: 180 SSVSKLILTMGVRYSPSLQSVSYPINSMKRNLDWAHVVAYDYHMPSRENFTGNHAALYNP 239

Query: 227 SSWFNTNDSIREWLKTGFPANKLVLGLPYHGYAWQLVNPNENAVGAPAAGPAITMDGSMG 286
           SS  +T+  IREWL  G+PANKL+LG+PYHGYAW+LV+P +N++GAPA+GP +T+DGS+G
Sbjct: 240 SSNISTDFGIREWLSRGYPANKLLLGMPYHGYAWKLVDPTDNSLGAPASGPGVTIDGSIG 299

Query: 287 YKSIKAFIRDYGYGVASLYNDSYDVNFFSSGKNWINFDGAEAITAKVSFAKEKGLLGYNA 346
           Y+ +++FI++YGYG  S+YN +Y VN+F +G  WINFD  E + AK+S+AKEKGLLGYN 
Sbjct: 300 YRFVRSFIQNYGYGARSVYNSTYVVNYFVAGSTWINFDDVETVRAKISYAKEKGLLGYNV 359

Query: 347 FQLSNDDKWELSLAG 361
           FQ+ NDD W LSLAG
Sbjct: 360 FQVINDDNWALSLAG 374

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359497679|ref|XP_003635605.1| PREDICTED: chitotriosidase-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359497026|ref|XP_003635401.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410-like, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|359484771|ref|XP_003633158.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356558668|ref|XP_003547625.1| PREDICTED: uncharacterized protein LOC100787480 [Glycine max] Back     alignment and taxonomy information
>gi|255565055|ref|XP_002523520.1| conserved hypothetical protein [Ricinus communis] gi|223537227|gb|EEF38859.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|296088199|emb|CBI35714.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224142425|ref|XP_002324558.1| predicted protein [Populus trichocarpa] gi|222865992|gb|EEF03123.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|5814093|gb|AAD52097.1|AF088885_1 receptor-like kinase CHRK1 [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|15235200|ref|NP_193716.1| Glycosyl hydrolase family protein with chitinase insertion domain [Arabidopsis thaliana] gi|3250690|emb|CAA19698.1| putative chitinase [Arabidopsis thaliana] gi|7268777|emb|CAB78983.1| putative chitinase [Arabidopsis thaliana] gi|119360133|gb|ABL66795.1| At4g19810 [Arabidopsis thaliana] gi|332658828|gb|AEE84228.1| Glycosyl hydrolase family protein with chitinase insertion domain [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query383
TAIR|locus:2134025379 ChiC "class V chitinase" [Arab 0.921 0.931 0.435 5e-76
TAIR|locus:2134030366 AT4G19820 [Arabidopsis thalian 0.887 0.928 0.413 4.5e-66
TAIR|locus:2134015398 AT4G19800 [Arabidopsis thalian 0.877 0.844 0.381 2.5e-65
TAIR|locus:2133955369 AT4G19760 [Arabidopsis thalian 0.869 0.902 0.403 5.1e-58
TAIR|locus:2133940362 AT4G19750 [Arabidopsis thalian 0.872 0.922 0.4 2.8e-57
TAIR|locus:2134010363 AT4G19720 [Arabidopsis thalian 0.877 0.925 0.379 8.6e-56
TAIR|locus:2134020332 AT4G19730 [Arabidopsis thalian 0.804 0.927 0.383 9.5e-50
TAIR|locus:2133970261 AT4G19770 [Arabidopsis thalian 0.657 0.965 0.390 3.8e-46
RGD|1305646464 Chit1 "chitinase 1 (chitotrios 0.835 0.689 0.304 3.1e-35
UNIPROTKB|F1MH27472 CHIA "Acidic mammalian chitina 0.785 0.637 0.325 1.7e-34
TAIR|locus:2134025 ChiC "class V chitinase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
 Identities = 159/365 (43%), Positives = 226/365 (61%)

Query:    22 CTSSTSWIKGGYWTSRSELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSSFT 81
             C+ + + +K  YW   SE PV+ I+S LFTHL CAFA LNS T  + ++S  +  FS+FT
Sbjct:    21 CSMAQTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFT 80

Query:    82 NTVKRKNPSVVTLLSIRGGTA---IFSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGV 138
              TV+R+NPSV TLLSI GG A    ++SM +  ++RKSFI+SSI  AR YGF GLDL   
Sbjct:    81 QTVQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWE 140

Query:   139 LPSKSTNMTNLGILFDEWRAEVTSEARNSGNSQLLLVMKSHHLPAIDSVTYPIDSMLRNL 198
              PS +T MTN G L  EWR+ V +EA +SG  +LLL     +     SV YP+ ++  +L
Sbjct:   141 YPSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSL 200

Query:   199 DWVHVRAYDYYLPSRDNFTGAHSALYSSSSWFNTNDS-IREWLKTGFPANKLVLGLPYHG 257
             DWV++ AYD+Y P     TG  +AL+  S+   + D+  R W++ G PA K VLG PY+G
Sbjct:   201 DWVNLMAYDFYGPGWSRVTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPYYG 260

Query:   258 YAWQLVNPNENAVGAPAAGPAITMDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSG 317
             YAW+L N N ++  AP  G AI+ DGS+GY  I+ FI D G    ++YN +   ++  +G
Sbjct:   261 YAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNG--ATTVYNSTVVGDYCYAG 318

Query:   318 KNWINFDGAEAITAKVSFAKEKGLLGYNAFQLSNDDKWELSLAGMQLLITYNSYDQSFST 377
              NWI +D  ++I  KV +AK++GLLGY ++ +  DD   LS A  Q      ++D + +T
Sbjct:   319 TNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSRAASQ------AWDATTAT 372

Query:   378 KRSFE 382
              R+ +
Sbjct:   373 TRTIQ 377
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0004568 "chitinase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0006032 "chitin catabolic process" evidence=IDA
GO:0008843 "endochitinase activity" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP
GO:0009737 "response to abscisic acid stimulus" evidence=IEP
GO:0009753 "response to jasmonic acid stimulus" evidence=IEP
GO:0035885 "exochitinase activity" evidence=IDA
TAIR|locus:2134030 AT4G19820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134015 AT4G19800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133955 AT4G19760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133940 AT4G19750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134010 AT4G19720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134020 AT4G19730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133970 AT4G19770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
RGD|1305646 Chit1 "chitinase 1 (chitotriosidase)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1MH27 CHIA "Acidic mammalian chitinase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.14LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query383
cd02879299 cd02879, GH18_plant_chitinase_class_V, The class V 1e-119
smart00636334 smart00636, Glyco_18, Glyco_18 domain 4e-61
pfam00704325 pfam00704, Glyco_hydro_18, Glycosyl hydrolases fam 2e-59
cd02872362 cd02872, GH18_chitolectin_chitotriosidase, This co 3e-51
cd02873413 cd02873, GH18_IDGF, The IDGF's (imaginal disc grow 1e-23
cd06548322 cd06548, GH18_chitinase, The GH18 (glycosyl hydrol 8e-23
COG3325441 COG3325, ChiA, Chitinase [Carbohydrate transport a 3e-17
cd00598210 cd00598, GH18_chitinase-like, The GH18 (glycosyl h 5e-16
cd06545253 cd06545, GH18_3CO4_chitinase, The Bacteroides thet 9e-09
cd02874313 cd02874, GH18_CFLE_spore_hydrolase, Cortical fragm 3e-06
COG3858423 COG3858, COG3858, Predicted glycosyl hydrolase [Ge 5e-05
cd02878345 cd02878, GH18_zymocin_alpha, Zymocin, alpha subuni 2e-04
>gnl|CDD|119358 cd02879, GH18_plant_chitinase_class_V, The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes Back     alignment and domain information 
 Score =  347 bits (892), Expect = e-119
 Identities = 144/341 (42%), Positives = 191/341 (56%), Gaps = 50/341 (14%)

Query: 26  TSWIKGGYWTSRS-ELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSSFTNTV 84
           ++ +KGGYW + S E P S I+S LFTHL  AFA L+ ST+ + I+ + E  FS+FT TV
Sbjct: 1   STIVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISPSDESEFSTFTETV 60

Query: 85  KRKNPSVVTLLSIRGGTA---IFSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGVLPS 141
           KRKNPSV TLLSI GG +    F++M +  + RK+FI SSI+ AR YGF GLDL    PS
Sbjct: 61  KRKNPSVKTLLSIGGGGSDSSAFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFPS 120

Query: 142 KSTNMTNLGILFDEWRAEVTSEARNSGNSQLLLVM----KSHHLPAIDSVTYPIDSMLRN 197
               M N G L +EWRA V  EAR+SG   LLL            + DSV+YPI+++ +N
Sbjct: 121 SQVEMENFGKLLEEWRAAVKDEARSSGRPPLLLTAAVYFSPILFLSDDSVSYPIEAINKN 180

Query: 198 LDWVHVRAYDYYLPSRDNFTGAHSALYSSSSWFNTNDSIREWLKTGFPANKLVLGLPYHG 257
           LDWV+V AYDYY     N TG  +ALY  +S  +T+  I+ W+K G PA KLVLGLP +G
Sbjct: 181 LDWVNVMAYDYYGSWESNTTGPAAALYDPNSNVSTDYGIKSWIKAGVPAKKLVLGLPLYG 240

Query: 258 YAWQLVNPNENAVGAPAAGPAITMDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSG 317
            AW                                          +LY+ +   ++  +G
Sbjct: 241 RAW------------------------------------------TLYDTTTVSSYVYAG 258

Query: 318 KNWINFDGAEAITAKVSFAKEKGLLGYNAFQLSNDDKWELS 358
             WI +D  ++I  KV +AK+KGLLGY A+ +  DD   LS
Sbjct: 259 TTWIGYDDVQSIAVKVKYAKQKGLLGYFAWAVGYDDNNWLS 299

The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. Length = 299
>gnl|CDD|214753 smart00636, Glyco_18, Glyco_18 domain Back     alignment and domain information
>gnl|CDD|216071 pfam00704, Glyco_hydro_18, Glycosyl hydrolases family 18 Back     alignment and domain information
>gnl|CDD|119351 cd02872, GH18_chitolectin_chitotriosidase, This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases Back     alignment and domain information
>gnl|CDD|119352 cd02873, GH18_IDGF, The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster Back     alignment and domain information
>gnl|CDD|119365 cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites Back     alignment and domain information
>gnl|CDD|225862 COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|119349 cd00598, GH18_chitinase-like, The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>gnl|CDD|119362 cd06545, GH18_3CO4_chitinase, The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>gnl|CDD|119353 cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination Back     alignment and domain information
>gnl|CDD|226376 COG3858, COG3858, Predicted glycosyl hydrolase [General function prediction only] Back     alignment and domain information
>gnl|CDD|119357 cd02878, GH18_zymocin_alpha, Zymocin, alpha subunit Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 383
cd02872362 GH18_chitolectin_chitotriosidase This conserved do 100.0
cd02879299 GH18_plant_chitinase_class_V The class V plant chi 100.0
cd02873413 GH18_IDGF The IDGF's (imaginal disc growth factors 100.0
smart00636334 Glyco_18 Glycosyl hydrolase family 18. 100.0
cd02878345 GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin 100.0
KOG2806432 consensus Chitinase [Carbohydrate transport and me 100.0
cd06548322 GH18_chitinase The GH18 (glycosyl hydrolases, fami 100.0
COG3325441 ChiA Chitinase [Carbohydrate transport and metabol 100.0
PF00704343 Glyco_hydro_18: Glycosyl hydrolases family 18; Int 100.0
cd02876318 GH18_SI-CLP Stabilin-1 interacting chitinase-like 100.0
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 100.0
cd02874313 GH18_CFLE_spore_hydrolase Cortical fragment-lytic 100.0
cd06545253 GH18_3CO4_chitinase The Bacteroides thetaiotaomicr 100.0
cd06549298 GH18_trifunctional GH18 domain of an uncharacteriz 100.0
cd00598210 GH18_chitinase-like The GH18 (glycosyl hydrolase, 100.0
COG3858423 Predicted glycosyl hydrolase [General function pre 100.0
cd06546256 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 100.0
cd06544253 GH18_narbonin Narbonin is a plant 2S protein from 99.98
cd02871312 GH18_chitinase_D-like GH18 domain of Chitinase D ( 99.97
KOG2091392 consensus Predicted member of glycosyl hydrolase f 99.96
cd06542255 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases 99.91
cd02877280 GH18_hevamine_XipI_class_III This conserved domain 99.89
cd06543294 GH18_PF-ChiA-like PF-ChiA is an uncharacterized ch 99.86
COG3469332 Chitinase [Carbohydrate transport and metabolism] 99.8
KOG4701 568 consensus Chitinase [Cell wall/membrane/envelope b 99.43
cd06547339 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG 98.36
PF03644311 Glyco_hydro_85: Glycosyl hydrolase family 85 ; Int 97.87
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 97.86
PF11340181 DUF3142: Protein of unknown function (DUF3142); In 97.42
PF13200316 DUF4015: Putative glycosyl hydrolase domain 97.41
KOG2331 526 consensus Predicted glycosylhydrolase [General fun 95.29
PF14883294 GHL13: Hypothetical glycosyl hydrolase family 13 91.72
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 91.46
COG1306400 Uncharacterized conserved protein [Function unknow 91.38
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 90.33
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 89.13
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 85.38
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 84.73
COG1649418 Uncharacterized protein conserved in bacteria [Fun 83.9
cd04734343 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN 82.6
cd02932336 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN 82.33
COG1902363 NemA NADH:flavin oxidoreductases, Old Yellow Enzym 81.51
cd04735353 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN 81.5
COG4724 553 Endo-beta-N-acetylglucosaminidase D [Carbohydrate 81.32
cd02930353 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin 81.1
TIGR01370315 cysRS possible cysteinyl-tRNA synthetase, Methanoc 80.69
PRK12568730 glycogen branching enzyme; Provisional 80.43
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases Back     alignment and domain information 
Probab=100.00  E-value=3e-65  Score=493.81  Aligned_cols=326  Identities=33%  Similarity=0.536  Sum_probs=285.4

Q ss_pred             EEEEecC---C----CCCCCCCCCCCCCcEEEEEEEEEeCCCcEEEeCCc----chhhHHHHHHHHHhcCCCceEEEEEe
Q 041217           30 KGGYWTS---R----SELPVSQINSGLFTHLTCAFAYLNSSTFTLYINST----YEKSFSSFTNTVKRKNPSVVTLLSIR   98 (383)
Q Consensus        30 ~~~Y~~~---~----~~~~~~~i~~~~~thii~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~lk~~~p~~kvllsig   98 (383)
                      |+|||+.   .    ..|.++++|.++||||+|+|+.++++| ++...++    ....+.++. .+|+++|++||+++||
T Consensus         1 v~~y~~~w~~~~~~~~~~~~~~i~~~~~Thv~y~f~~i~~~g-~~~~~~~~~d~~~~~~~~~~-~lk~~~p~lkvlisiG   78 (362)
T cd02872           1 VVCYFTNWAQYRPGNGKFVPENIDPFLCTHIIYAFAGLNPDG-NIIILDEWNDIDLGLYERFN-ALKEKNPNLKTLLAIG   78 (362)
T ss_pred             CEEEECcchhcCCCCCCcChhHCCcccCCEEEEeeEEECCCC-CEEecCchhhhhhhHHHHHH-HHHhhCCCceEEEEEc
Confidence            5899988   2    268899999999999999999999986 5444443    345566775 6999999999999999


Q ss_pred             cCCc---cchhhhcCchhHHHHHHHHHHHHHHcCCCeEEEeccCCCC----CcchhhHHHHHHHHHHHHHHHhhccCCcc
Q 041217           99 GGTA---IFSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGVLPSK----STNMTNLGILFDEWRAEVTSEARNSGNSQ  171 (383)
Q Consensus        99 g~~~---~~~~~~~~~~~r~~f~~~i~~~l~~~~~DGidiD~e~~~~----~~~~~~~~~ll~~l~~~l~~~~~~~~~~~  171 (383)
                      ||+.   .|+.++++++.|++|++++++++++|+|||||||||+|..    ++++++|+.||++||++|++.+     ++
T Consensus        79 G~~~~~~~f~~~~~~~~~r~~fi~~iv~~l~~~~~DGidiDwE~p~~~~~~~~d~~~~~~ll~~lr~~l~~~~-----~~  153 (362)
T cd02872          79 GWNFGSAKFSAMAASPENRKTFIKSAIAFLRKYGFDGLDLDWEYPGQRGGPPEDKENFVTLLKELREAFEPEA-----PR  153 (362)
T ss_pred             CCCCCcchhHHHhCCHHHHHHHHHHHHHHHHHcCCCCeeeeeeccccCCCCHHHHHHHHHHHHHHHHHHHhhC-----cC
Confidence            9875   7999999999999999999999999999999999999974    5789999999999999998753     36


Q ss_pred             eEEEEEecCCCccccCCCChhhhhccccEEEeeeccCCCCCCCCCCCCCCCCCCCC------CCCcHHHHHHHHHHcCCC
Q 041217          172 LLLVMKSHHLPAIDSVTYPIDSMLRNLDWVHVRAYDYYLPSRDNFTGAHSALYSSS------SWFNTNDSIREWLKTGFP  245 (383)
Q Consensus       172 ~~ls~a~~~~~~~~~~~~~~~~l~~~vD~v~lm~yd~~~~~~~~~~~~~apl~~~~------~~~~~~~~~~~~~~~gvp  245 (383)
                      ++|++++|+.+......||++++.+++|+|+||+||++++| ...++++|||+...      ...+++.+++.|++.|+|
T Consensus       154 ~~ls~av~~~~~~~~~~~d~~~l~~~vD~v~vmtYD~~~~~-~~~~g~~spl~~~~~~~~~~~~~~v~~~v~~~~~~gvp  232 (362)
T cd02872         154 LLLTAAVSAGKETIDAAYDIPEISKYLDFINVMTYDFHGSW-EGVTGHNSPLYAGSADTGDQKYLNVDYAIKYWLSKGAP  232 (362)
T ss_pred             eEEEEEecCChHHHhhcCCHHHHhhhcceEEEecccCCCCC-CCCCCCCCCCCCCCCCccccccccHHHHHHHHHHcCCC
Confidence            89999999876555556999999999999999999999997 45789999998432      236899999999999999


Q ss_pred             CCcEEEecccceeeeeecCCCCCCCCCCCcCCC-----CCCCCcccHHHHHHHHhhCCCceEEEEcCCceeeEEEeCCEE
Q 041217          246 ANKLVLGLPYHGYAWQLVNPNENAVGAPAAGPA-----ITMDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSGKNW  320 (383)
Q Consensus       246 ~~Kivlglp~yG~~~~~~~~~~~~~~~~~~g~~-----~~~~g~~~y~ei~~~~~~~~~~~~~~~D~~~~~~y~~~~~~~  320 (383)
                      ++||+||||+||+.|++.++.++++|+|..|++     +.+.|.++|.|||+.+ ..+  ++..||+.+.+||.+.+++|
T Consensus       233 ~~KlvlGlp~YG~~~~~~~~~~~~~g~~~~g~~~~g~~~~~~g~~~y~ei~~~~-~~~--~~~~~D~~~~~~y~~~~~~~  309 (362)
T cd02872         233 PEKLVLGIPTYGRSFTLASPSNTGVGAPASGPGTAGPYTREAGFLAYYEICEFL-KSG--WTVVWDDEQKVPYAYKGNQW  309 (362)
T ss_pred             HHHeEeccccccceeeecCCccCCCCCccCCCCCCCCCcCCCccchHHHHHHhh-cCC--cEEEEeCCcceeEEEECCEE
Confidence            999999999999999999888888888887654     2367889999999988 667  99999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHHHHcCCcEEEEEecCCCCChhHHHHHHHhhc
Q 041217          321 INFDGAEAITAKVSFAKEKGLLGYNAFQLSNDDKWELSLAGMQLLI  366 (383)
Q Consensus       321 i~ydd~~S~~~K~~~~~~~glgGv~iW~l~~Dd~~~l~~~~~~~l~  366 (383)
                      |+|||++|++.|++|++++||||+++|++++||+.+.|+....||.
T Consensus       310 v~ydd~~Si~~K~~~~~~~~lgGv~iW~l~~DD~~g~cg~~~~pLl  355 (362)
T cd02872         310 VGYDDEESIALKVQYLKSKGLGGAMVWSIDLDDFRGTCGQGKYPLL  355 (362)
T ss_pred             EEeCCHHHHHHHHHHHHhCCCceEEEEeeecCcCCCccCCCCCcHH
Confidence            9999999999999999999999999999999999999988544554

The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the la
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes Back     alignment and domain information
>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster Back     alignment and domain information
>smart00636 Glyco_18 Glycosyl hydrolase family 18 Back     alignment and domain information
>cd02878 GH18_zymocin_alpha Zymocin, alpha subunit Back     alignment and domain information
>KOG2806 consensus Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites Back     alignment and domain information
>COG3325 ChiA Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination Back     alignment and domain information
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain Back     alignment and domain information
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>COG3858 Predicted glycosyl hydrolase [General function prediction only] Back     alignment and domain information
>cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii Back     alignment and domain information
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L Back     alignment and domain information
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>KOG2091 consensus Predicted member of glycosyl hydrolase family 18 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins Back     alignment and domain information
>cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain Back     alignment and domain information
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain Back     alignment and domain information
>COG3469 Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4701 consensus Chitinase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins Back     alignment and domain information
>PF03644 Glyco_hydro_85: Glycosyl hydrolase family 85 ; InterPro: IPR005201 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PF11340 DUF3142: Protein of unknown function (DUF3142); InterPro: IPR021488 This bacterial family of proteins has no known function Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>KOG2331 consensus Predicted glycosylhydrolase [General function prediction only] Back     alignment and domain information
>PF14883 GHL13: Hypothetical glycosyl hydrolase family 13 Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1306 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3 Back     alignment and domain information
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain Back     alignment and domain information
>COG1902 NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion] Back     alignment and domain information
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4 Back     alignment and domain information
>COG4724 Endo-beta-N-acetylglucosaminidase D [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain Back     alignment and domain information
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query383
3aqu_A356 Crystal Structure Of A Class V Chitinase From Arabi 5e-80
3alg_A353 Crystal Structure Of Class V Chitinase (E115q Mutan 2e-75
3alf_A353 Crystal Structure Of Class V Chitinase From Nicotia 2e-75
1hkk_A364 High Resoultion Crystal Structure Of Human Chitinas 6e-34
1hki_A365 Crystal Structure Of Human Chitinase In Complex Wit 7e-34
1lg1_A365 Crystal Structure Of Human Chitotriosidase In Compl 7e-34
1guv_A366 Structure Of Human Chitotriosidase Length = 366 7e-34
1waw_A445 Specificity And Affinity Of Natural Product Cyclope 1e-33
1hjv_A362 Crystal Structure Of Hcgp-39 In Complex With Chitin 4e-30
1e9l_A377 The Crystal Structure Of Novel Mammalian Lectin Ym1 7e-29
2pi6_A361 Crystal Structure Of The Sheep Signalling Glycoprot 1e-28
1sr0_A361 Crystal Structure Of Signalling Protein From Sheep( 2e-28
1xhg_A361 Crystal Structure Of A 40 Kda Signalling Protein Fr 2e-28
3fxy_A395 Acidic Mammalian Chinase, Catalytic Domain Length = 3e-28
1tfv_A361 Crystal Structure Of A Buffalo Signaling Glycoprote 4e-28
2ybt_A381 Crystal Structure Of Human Acidic Chitinase In Comp 4e-28
1zbv_A361 Crystal Structure Of The Goat Signalling Protein (S 4e-28
1owq_A361 Crystal Structure Of A 40 Kda Signalling Protein (S 5e-28
1syt_A361 Crystal Structure Of Signalling Protein From Goat S 2e-27
1ljy_A361 Crystal Structure Of A Novel Regulatory 40 Kda Mamm 2e-27
2esc_A361 Crystal Structure Of A 40 Kda Protective Signalling 3e-27
4ay1_A365 Human Ykl-39 Is A Pseudo-Chitinase With Retained Ch 1e-26
3g6l_A406 The Crystal Structure Of A Chitinase Crchi1 From Th 2e-15
1itx_A419 Catalytic Domain Of Chitinase A1 From Bacillus Circ 3e-15
1w9p_A433 Specificity And Affinity Of Natural Product Cyclope 6e-15
1wno_A395 Crystal Structure Of A Native Chitinase From Asperg 7e-15
1jnd_A420 Crystal Structure Of Imaginal Disc Growth Factor-2 7e-14
1ll6_A392 Structure Of The D169n Mutant Of C. Immitis Chitina 4e-13
1ll7_A392 Structure Of The E171q Mutant Of C. Immitis Chitina 4e-13
1d2k_A392 C. Immitis Chitinase 1 At 2.2 Angstroms Resolution 4e-13
3ars_A584 Crystal Structure Analysis Of Chitinase A From Vibr 2e-10
3b9a_A584 Crystal Structure Of Vibrio Harveyi Chitinase A Com 1e-09
3b8s_A584 Crystal Structure Of Wild-Type Chitinase A From Vib 3e-09
1ur9_A499 Interactions Of A Family 18 Chitinase With The Desi 4e-08
1e6n_B499 Chitinase B From Serratia Marcescens Inactive Mutan 4e-08
1ogb_A499 Chitinase B From Serratia Marcescens Mutant D142n L 4e-08
1h0g_A499 Complex Of A Chitinase With The Natural Product Cyc 4e-08
1e15_A499 Chitinase B From Serratia Marcescens Length = 499 4e-08
1e6z_A498 Chitinase B From Serratia Marcescens Wildtype In Co 5e-08
1goi_A499 Crystal Structure Of The D140n Mutant Of Chitinase 2e-07
1kfw_A435 Structure Of Catalytic Domain Of Psychrophilic Chit 6e-07
3qok_A420 Crystal Structure Of Putative Chitinase Ii From Kle 3e-06
>pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  294 bits (753), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 158/358 (44%), Positives = 222/358 (62%), Gaps = 12/358 (3%)
Query: 29  IKGGYWTSRSELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSSFTNTVKRKN 88
           +K  YW   SE PV+ I+S LFTHL CAFA LNS T  + ++S  +  FS+FT TV+R+N
Sbjct: 5   VKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQRRN 64
Query: 89  PSVVTLLSIRGGTA---IFSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGVLPSKSTN 145
           PSV TLLSI GG A    ++SM +  ++RKSFI+SSI  AR YGF GLDL    PS +T 
Sbjct: 65  PSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATE 124
Query: 146 MTNLGILFDEWRAEVTSEARNSGNSQLLLVMKSHHLPAIDSVTYPIDSMLRNLDWVHVRA 205
           MTN G L  EWR+ V +EA +SG  +LLL     +     SV YP+ ++  +LDWV++ A
Sbjct: 125 MTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMA 184
Query: 206 YDYYLPSRDNFTGAHSALYSSSSWFNTNDS-IREWLKTGFPANKLVLGLPYHGYAWQLVN 264
           YD+Y P     TG  +AL+  S+   + D+  R W++ G PA K VLG PY+GYAW+L N
Sbjct: 185 YDFYGPGWSRVTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTN 244
Query: 265 PNENAVGAPAAGPAITMDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSGKNWINFD 324
            N ++  AP  G AI+ DGS+GY  I+ FI D   G  ++YN +   ++  +G NWI +D
Sbjct: 245 ANSHSYYAPTTGAAISPDGSIGYGQIRKFIVD--NGATTVYNSTVVGDYCYAGTNWIGYD 302
Query: 325 GAEAITAKVSFAKEKGLLGYNAFQLSNDDKWELSLAGMQLLITYNSYDQSFSTKRSFE 382
             ++I  KV +AK++GLLGY ++ +  DD   LS A  Q      ++D + +T R+ +
Sbjct: 303 DNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSRAASQ------AWDATTATTRTIQ 354
>pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 Length = 353 Back     alignment and structure
>pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum Length = 353 Back     alignment and structure
>pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin Length = 364 Back     alignment and structure
>pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With Glucoallosamidin B Length = 365 Back     alignment and structure
>pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With Chitobiose Length = 365 Back     alignment and structure
>pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase Length = 366 Back     alignment and structure
>pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitor Argadin Against Human Chitinase Length = 445 Back     alignment and structure
>pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin Tetramer Length = 362 Back     alignment and structure
>pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1 Suggests A Saccharide Binding Site Length = 377 Back     alignment and structure
>pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein (Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a Resolution Reveals Specific Binding Characteristics Of Sps-40 Length = 361 Back     alignment and structure
>pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40) At 3.0a Resolution Using Crystal Grown In The Presence Of Polysaccharides Length = 361 Back     alignment and structure
>pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From Porcine (spp-40) At 2.89a Resolution Length = 361 Back     alignment and structure
>pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain Length = 395 Back     alignment and structure
>pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein (Spb-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex With Bisdionin C Length = 381 Back     alignment and structure
>pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40) Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a Resolution Length = 361 Back     alignment and structure
>pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40 In The Presense Of N,n',n''-triacetyl-chitotriose At 2.6a Resolution Length = 361 Back     alignment and structure
>pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary Gland Protein (Mgp-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling Protein From Bovine (Spc-40) At 2.1 A Resolution Length = 361 Back     alignment and structure
>pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained Chitooligosaccharide Binding Properties Length = 365 Back     alignment and structure
>pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The Nematophagous Fungus Clonostachys Rosea Length = 406 Back     alignment and structure
>pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 Length = 419 Back     alignment and structure
>pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human And Bacterial Chitinasefra Length = 433 Back     alignment and structure
>pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus Fumigatus Yj- 407 Length = 395 Back     alignment and structure
>pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2 Length = 420 Back     alignment and structure
>pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1 Length = 392 Back     alignment and structure
>pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1 Length = 392 Back     alignment and structure
>pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution Length = 392 Back     alignment and structure
>pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio Harveyi With Novel Inhibitors - Apo Structure Of Mutant W275g Length = 584 Back     alignment and structure
>pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed With Hexasaccharide Length = 584 Back     alignment and structure
>pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio Harveyi Length = 584 Back     alignment and structure
>pdb|1UR9|A Chain A, Interactions Of A Family 18 Chitinase With The Designed Inhibitor Hm508, And Its Degradation Product, Chitobiono-Delta-Lactone Length = 499 Back     alignment and structure
>pdb|1E6N|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q In Complex With N-Acetylglucosamine-Pentamer Length = 499 Back     alignment and structure
>pdb|1OGB|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n Length = 499 Back     alignment and structure
>pdb|1H0G|A Chain A, Complex Of A Chitinase With The Natural Product Cyclopentapeptide Argadin From Clonostachys Length = 499 Back     alignment and structure
>pdb|1E15|A Chain A, Chitinase B From Serratia Marcescens Length = 499 Back     alignment and structure
>pdb|1E6Z|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex With Catalytic Intermediate Length = 498 Back     alignment and structure
>pdb|1GOI|A Chain A, Crystal Structure Of The D140n Mutant Of Chitinase B From Serratia Marcescens At 1.45 A Resolution Length = 499 Back     alignment and structure
>pdb|1KFW|A Chain A, Structure Of Catalytic Domain Of Psychrophilic Chitinase B From Arthrobacter Tad20 Length = 435 Back     alignment and structure
>pdb|3QOK|A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae Length = 420 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query383
3alf_A353 Chitinase, class V; hydrolase; 1.20A {Nicotiana ta 1e-106
3aqu_A356 AT4G19810; stress response, TIM barrel, hydrolase, 1e-106
4ay1_A365 Chitinase-3-like protein 2; chilectin, lectin, chi 3e-81
1vf8_A377 YM1, secretory protein; chitinase, CHI-lectin, str 7e-79
3fy1_A395 Amcase, TSA1902, acidic mammalian chitinase; struc 2e-77
1wb0_A445 Chitinase 1, chitotriosidase 1; cyclopentapeptide 2e-75
2pi6_A361 Chitinase-3-like protein 1; complex, signaling pro 9e-71
1jnd_A420 Imaginal DISC growth factor-2; IDGF, chitinase, in 1e-52
1w9p_A433 Chitinase; peptide inhibitors, argifin, argadin, g 2e-50
3qok_A420 Putative chitinase II; structural genomics, PSI-bi 2e-50
3g6m_A406 Chitinase, crchi1; inhibitor, caffeine, glycosidas 3e-49
1ll7_A392 Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { 8e-49
1itx_A419 Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) 2e-45
1kfw_A435 Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob 3e-44
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 5e-44
1edq_A540 Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 6e-41
1goi_A499 Chitinase B; chitin degradation, hydrolase, glycos 7e-41
3oa5_A574 CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers 3e-40
3arx_A584 Chitinase A; TIM barrel, inhibitor complex, glycos 1e-37
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 2e-30
3sim_A275 Protein, family 18 chitinase; family 18 plant chit 3e-27
3bxw_B393 Chitinase domain-containing protein 1; TIM barrel, 5e-27
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 6e-17
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 4e-14
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 2e-12
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 2e-11
1nar_A290 Narbonin; plant SEED protein; 1.80A {Vicia narbone 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-07
3ian_A321 Chitinase; structural genomics, hydrolase, glycosi 1e-06
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Length = 353 Back     alignment and structure
 Score =  314 bits (807), Expect = e-106
 Identities = 146/344 (42%), Positives = 210/344 (61%), Gaps = 9/344 (2%)

Query: 29  IKGGYWTSRSELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSSFTNTVKRKN 88
           +KGGYW   S L ++ I+S LFTHL CAFA LN     L I+   + SF  FT+TV+RKN
Sbjct: 4   VKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQRKN 63

Query: 89  PSVVTLLSIRG---GTAIFSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGVLPSKSTN 145
           PSV T LSI G    +  +  M  Q ++RKSFI+SSI  AR  GF GLDL    P  + +
Sbjct: 64  PSVKTFLSIAGGRANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSAAD 123

Query: 146 MTNLGILFDEWRAEVTSEARNSGNSQLLLVMKSHHLPAIDSVTYPIDSMLRNLDWVHVRA 205
           MTNLG L +EWR  + +EARNSG + LLL     + P ++ + YP++S+ RNLDW+++ A
Sbjct: 124 MTNLGTLLNEWRTAINTEARNSGRAALLLTAAVSNSPRVNGLNYPVESLARNLDWINLMA 183

Query: 206 YDYYLPSRD-NFTGAHSALYSSSSWFNTNDSIREWLKTGFPANKLVLGLPYHGYAWQLVN 264
           YD+Y P+   + T +H+ L+   +  + +D I  W++ G P  KLVLG+P++GYAW+LVN
Sbjct: 184 YDFYGPNWSPSQTNSHAQLFDPVNHVSGSDGINAWIQAGVPTKKLVLGIPFYGYAWRLVN 243

Query: 265 PNENAVGAPAAGPAIT---MDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSGKNWI 321
            N + + APAAG +      DGSM Y  I+ +I +       +YN +   ++  SG NWI
Sbjct: 244 ANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESRATT--VYNATIVGDYCYSGSNWI 301

Query: 322 NFDGAEAITAKVSFAKEKGLLGYNAFQLSNDDKWELSLAGMQLL 365
           ++D  + +  KV++ K +GLLGY A+ ++ D  W LS    Q  
Sbjct: 302 SYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLSRTASQTW 345
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Length = 356 Back     alignment and structure
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Length = 365 Back     alignment and structure
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Length = 377 Back     alignment and structure
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Length = 395 Back     alignment and structure
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Length = 445 Back     alignment and structure
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Length = 361 Back     alignment and structure
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Length = 420 Back     alignment and structure
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Length = 433 Back     alignment and structure
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Length = 420 Back     alignment and structure
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Length = 406 Back     alignment and structure
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Length = 392 Back     alignment and structure
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Length = 419 Back     alignment and structure
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Length = 435 Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Length = 312 Back     alignment and structure
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Length = 540 Back     alignment and structure
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Length = 499 Back     alignment and structure
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Length = 574 Back     alignment and structure
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Length = 584 Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Length = 319 Back     alignment and structure
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Length = 275 Back     alignment and structure
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Length = 393 Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Length = 333 Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Length = 290 Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Length = 302 Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Length = 271 Back     alignment and structure
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Length = 290 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Length = 321 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query383
3alf_A353 Chitinase, class V; hydrolase; 1.20A {Nicotiana ta 100.0
3aqu_A356 AT4G19810; stress response, TIM barrel, hydrolase, 100.0
4ay1_A365 Chitinase-3-like protein 2; chilectin, lectin, chi 100.0
3fy1_A395 Amcase, TSA1902, acidic mammalian chitinase; struc 100.0
1vf8_A377 YM1, secretory protein; chitinase, CHI-lectin, str 100.0
2pi6_A361 Chitinase-3-like protein 1; complex, signaling pro 100.0
1wb0_A445 Chitinase 1, chitotriosidase 1; cyclopentapeptide 100.0
1itx_A419 Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) 100.0
3qok_A420 Putative chitinase II; structural genomics, PSI-bi 100.0
3g6m_A406 Chitinase, crchi1; inhibitor, caffeine, glycosidas 100.0
1goi_A499 Chitinase B; chitin degradation, hydrolase, glycos 100.0
1ll7_A392 Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { 100.0
1edq_A540 Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 100.0
1kfw_A435 Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob 100.0
1jnd_A420 Imaginal DISC growth factor-2; IDGF, chitinase, in 100.0
1w9p_A433 Chitinase; peptide inhibitors, argifin, argadin, g 100.0
3arx_A584 Chitinase A; TIM barrel, inhibitor complex, glycos 100.0
3oa5_A574 CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers 100.0
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 100.0
3bxw_B393 Chitinase domain-containing protein 1; TIM barrel, 100.0
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 100.0
1nar_A290 Narbonin; plant SEED protein; 1.80A {Vicia narbone 100.0
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 100.0
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 100.0
3sim_A275 Protein, family 18 chitinase; family 18 plant chit 100.0
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 100.0
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 100.0
3ian_A321 Chitinase; structural genomics, hydrolase, glycosi 100.0
4ac1_X283 Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g 100.0
2hvm_A273 Hevamine; hydrolase, chitinase/lysozyme; 1.80A {He 99.97
2gsj_A271 Protein PPL-2; mimosoideae, chimerolectin, endochi 99.97
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 99.97
2uy2_A294 Endochitinase; carbohydrate metabolism, polysaccha 99.97
1cnv_A299 Concanavalin B; plant chitinase, chitin binding pr 99.96
1eok_A290 Endo-beta-N-acetylglucosaminidase F3; alpha/beta-b 99.95
2xtk_A310 CHIA1, class III chitinase CHIA1; hydrolase, GH18; 99.95
2ebn_A289 Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl 99.94
1ta3_A274 XIP-1, xylanase inhibitor protein I; beta alpha ba 99.92
3mu7_A273 XAIP-II, xylanase and alpha-amylase inhibitor prot 99.89
3poh_A451 Endo-beta-N-acetylglucosaminidase F1; TIM barrel, 99.84
2dsk_A311 Chitinase; catalytic domain, active domain, crysta 99.79
2w91_A 653 Endo-beta-N-acetylglucosaminidase D; hydrolase, N- 97.51
2vtf_A 626 Endo-beta-N-acetylglucosaminidase; hydrolase, fami 97.49
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 89.87
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 81.71
3k30_A 690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 81.37
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Back     alignment and structure
Probab=100.00  E-value=3.1e-72  Score=538.75  Aligned_cols=339  Identities=44%  Similarity=0.791  Sum_probs=312.0

Q ss_pred             CcEEEEEecCCCCCCCCCCCCCCCcEEEEEEEEEeCCCcEEEeCCcchhhHHHHHHHHHhcCCCceEEEEEecCCc---c
Q 041217           27 SWIKGGYWTSRSELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSSFTNTVKRKNPSVVTLLSIRGGTA---I  103 (383)
Q Consensus        27 ~~~~~~Y~~~~~~~~~~~i~~~~~thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~p~~kvllsigg~~~---~  103 (383)
                      .++++|||-+.+.+.+++|+..+||||+|+|+.++++++.+...+..+..+..+++.+|+++|++|++++||||+.   .
T Consensus         2 ~~~~~gY~~~~~~~~~~~i~~~~~THi~yaF~~i~~~~~~v~~~~~~~~~~~~~~~~lk~~~~~lkvllsiGG~~~~~~~   81 (353)
T 3alf_A            2 QNVKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQRKNPSVKTFLSIAGGRANSTA   81 (353)
T ss_dssp             CCEEEEEEEGGGCCCGGGCCGGGCSEEEEEEEEEETTTTEEECCHHHHHHHHHHHHHHHHHCTTCEEEEEEECTTSCHHH
T ss_pred             CceEEEEEecCCCCCHhHCCcccCCEEEEEEEEeeCCCCEEEeCCccHHHHHHHHHHHHhhCCCCeEEEEECCCCCCchh
Confidence            3678999966788999999999999999999999998778887766566788888889999999999999999974   7


Q ss_pred             chhhhcCchhHHHHHHHHHHHHHHcCCCeEEEeccCCCCCcchhhHHHHHHHHHHHHHHHhhccCCcceEEEEEecCCCc
Q 041217          104 FSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGVLPSKSTNMTNLGILFDEWRAEVTSEARNSGNSQLLLVMKSHHLPA  183 (383)
Q Consensus       104 ~~~~~~~~~~r~~f~~~i~~~l~~~~~DGidiD~e~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~~~~~~ls~a~~~~~~  183 (383)
                      |+.++++++.|++|++++++++++|+|||||||||+|..++++++|+.||++||++|++.++..++++++||+++|+.+.
T Consensus        82 f~~~~~~~~~r~~fi~siv~~~~~~~fDGiDiDwE~p~~~~d~~n~~~ll~eLr~~l~~~~~~~~~~~~~Ls~a~~~~~~  161 (353)
T 3alf_A           82 YGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSAADMTNLGTLLNEWRTAINTEARNSGRAALLLTAAVSNSPR  161 (353)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHTCSEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEEESSSE
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHcCCCeEEEEeeecCChhHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEecccCch
Confidence            99999999999999999999999999999999999998778999999999999999999887777778999999997665


Q ss_pred             cccCCCChhhhhccccEEEeeeccCCCC-CCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEecccceeeeee
Q 041217          184 IDSVTYPIDSMLRNLDWVHVRAYDYYLP-SRDNFTGAHSALYSSSSWFNTNDSIREWLKTGFPANKLVLGLPYHGYAWQL  262 (383)
Q Consensus       184 ~~~~~~~~~~l~~~vD~v~lm~yd~~~~-~~~~~~~~~apl~~~~~~~~~~~~~~~~~~~gvp~~Kivlglp~yG~~~~~  262 (383)
                      .....|++++|.+++|||+||+||+|++ |.+..++|+|||+++.+..+++.+|+.|++.|+|++||+||+|+|||.|++
T Consensus       162 ~~~~~~d~~~l~~~vD~invMtYD~~g~~w~~~~~g~~a~l~~~~~~~~~~~~v~~~~~~gvp~~KlvlGip~YGr~~~~  241 (353)
T 3alf_A          162 VNGLNYPVESLARNLDWINLMAYDFYGPNWSPSQTNSHAQLFDPVNHVSGSDGINAWIQAGVPTKKLVLGIPFYGYAWRL  241 (353)
T ss_dssp             ETTEECCHHHHHHHCSEEEEECCCSSCTTTSTTBCCCSSCSCCTTTCCSHHHHHHHHHHTTCCGGGEEEEEESEEEEEEE
T ss_pred             hhhcCCCHHHHhhhccEEEEEEeeccCCCCCCCCCCCCCcCcCCCCCccHHHHHHHHHHcCCChHHEEEEeCCceeeeec
Confidence            5444589999999999999999999998 865789999999988778899999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCcCC---CCCCCCcccHHHHHHHHhhCCCceEEEEcCCceeeEEEeCCEEEEeCCHHHHHHHHHHHHHc
Q 041217          263 VNPNENAVGAPAAGP---AITMDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSGKNWINFDGAEAITAKVSFAKEK  339 (383)
Q Consensus       263 ~~~~~~~~~~~~~g~---~~~~~g~~~y~ei~~~~~~~~~~~~~~~D~~~~~~y~~~~~~~i~ydd~~S~~~K~~~~~~~  339 (383)
                      .+++++++++|..|+   ++.+.|.++|.|||++++.++  ++..||++++++|++.+++||+|||++|++.|++|++++
T Consensus       242 ~~~~~~~~~~~~~g~~~~~~~~~g~~~y~ei~~~~~~~g--~~~~~D~~~~~~y~y~~~~~v~ydd~~Si~~K~~~~~~~  319 (353)
T 3alf_A          242 VNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESR--ATTVYNATIVGDYCYSGSNWISYDDTQTVRNKVNYVKGR  319 (353)
T ss_dssp             SCTTCCSTTCBEEEECTTSCTTTCEEEHHHHHHHHHHHT--CEEEEETTTTEEEEEETTEEEEECCHHHHHHHHHHHHHT
T ss_pred             cCCcCCCCCCCCCCCCCCCCCCCCeEcHHHHHHHHhhCC--CeEEEccccceEEEEeCCEEEEcCCHHHHHHHHHHHHhC
Confidence            999999999998776   555678999999999998888  999999999999999999999999999999999999999


Q ss_pred             CCcEEEEEecCCCCChhHHHHHHHhhcc
Q 041217          340 GLLGYNAFQLSNDDKWELSLAGMQLLIT  367 (383)
Q Consensus       340 glgGv~iW~l~~Dd~~~l~~~~~~~l~~  367 (383)
                      ||||+++|+|++||.+.|+++++..|..
T Consensus       320 gLgGv~~W~l~~Dd~~~ll~a~~~~l~~  347 (353)
T 3alf_A          320 GLLGYFAWHVAGDQNWGLSRTASQTWGV  347 (353)
T ss_dssp             TCSEEEEECGGGSSTTHHHHHHHHHHCS
T ss_pred             CCCEEEEEeccCCCCchHHHHHHHHhCc
Confidence            9999999999999999999999999976
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Back     alignment and structure
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Back     alignment and structure
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Back     alignment and structure
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Back     alignment and structure
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Back     alignment and structure
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Back     alignment and structure
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Back     alignment and structure
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Back     alignment and structure
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Back     alignment and structure
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Back     alignment and structure
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Back     alignment and structure
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Back     alignment and structure
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Back     alignment and structure
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Back     alignment and structure
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Back     alignment and structure
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Back     alignment and structure
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Back     alignment and structure
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Back     alignment and structure
>4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} Back     alignment and structure
>2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis} SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A* 1kqz_A* Back     alignment and structure
>2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala} Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Back     alignment and structure
>2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A* Back     alignment and structure
>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5 Back     alignment and structure
>1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A* Back     alignment and structure
>2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A {Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A* Back     alignment and structure
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Back     alignment and structure
>1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Triticum aestivum} SCOP: c.1.8.5 PDB: 1om0_A* 1te1_A* Back     alignment and structure
>3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} SCOP: c.1.8.0 PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A* Back     alignment and structure
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A Back     alignment and structure
>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A* Back     alignment and structure
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A* Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 383
d1wb0a1297 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma 1e-37
d1vf8a1302 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin 4e-35
d1goia2356 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic 1e-34
d2pi6a1292 c.1.8.5 (A:1-239,A:308-361) Signal processing prot 1e-33
d1w9pa1333 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergil 1e-32
d1ll7a1330 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus ( 4e-32
d1edqa2358 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalyt 5e-32
d1jnda1327 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth f 2e-28
d1itxa1347 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu 4e-26
d1kfwa1374 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitina 2e-24
d1nara_289 c.1.8.5 (A:) Seed storage protein {Vicia narbonens 6e-20
d2ebna_285 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl 7e-15
d1edta_265 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {St 1e-10
d2hvma_273 c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para 2e-09
d1ta3a_274 c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I { 1e-08
d1vf8a270 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mo 1e-08
d1wb0a268 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo 1e-04
d2pi6a268 d.26.3.1 (A:240-307) Signal processing protein (SP 6e-04
d1cnva_283 c.1.8.5 (A:) Seed storage protein {Jack bean (Cana 0.004
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitotriosidase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (340), Expect = 1e-37
 Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 18/243 (7%)

Query: 26  TSWIKGGYWTSRSELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSSFTNTVK 85
           T+W    Y    +      ++  L THL  AFA + +   +       +++     N +K
Sbjct: 8   TNW--AQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLS--TTEWNDETLYQEFNGLK 63

Query: 86  RKNPSVVTLLSIRGG---TAIFSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGVLP-- 140
           + NP + TLL+I G    T  F+ MV  ++NR++F+ S+I   R Y F GLDL    P  
Sbjct: 64  KMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGS 123

Query: 141 --SKSTNMTNLGILFDEWRAEVTSEARNSGNSQLLLVMKSHHLPAIDSVTYPIDSMLRNL 198
             S + +      L  +       EA+ SG  +LLL              Y +D + +NL
Sbjct: 124 QGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNL 183

Query: 199 DWVHVRAYDYYLPSRDNFTGAHSALYSSSSW------FNTNDSIREWLKTGFPANKLVLG 252
           D+V++ AYD++    +  TG +S LY            N + ++++WL+ G PA+KL+LG
Sbjct: 184 DFVNLMAYDFHGS-WEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILG 242

Query: 253 LPY 255
           +P 
Sbjct: 243 MPT 245
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 Back     information, alignment and structure
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 356 Back     information, alignment and structure
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 Back     information, alignment and structure
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Length = 333 Back     information, alignment and structure
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Length = 330 Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 358 Back     information, alignment and structure
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 327 Back     information, alignment and structure
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347 Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 374 Back     information, alignment and structure
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Length = 289 Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Length = 285 Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Length = 265 Back     information, alignment and structure
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 273 Back     information, alignment and structure
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 274 Back     information, alignment and structure
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 70 Back     information, alignment and structure
>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 68 Back     information, alignment and structure
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 68 Back     information, alignment and structure
>d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} Length = 283 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query383
d1wb0a1297 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 100.0
d1itxa1347 Chitinase A1 {Bacillus circulans [TaxId: 1397]} 100.0
d2pi6a1292 Signal processing protein (SPC-40, MGP-40) {Sheep 100.0
d1w9pa1333 Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} 100.0
d1kfwa1374 Psychrophilic chitinase B {Arthrobacter sp., tad20 100.0
d1vf8a1302 Chitinase-like lectin ym1, saccharide binding doma 100.0
d1edqa2358 Chitinase A, catalytic domain {Serratia marcescens 100.0
d1jnda1327 Imaginal disc growth factor-2 {Fruit fly (Drosophi 100.0
d1ll7a1330 Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 100.0
d1goia2356 Chitinase B, catalytic domain {Serratia marcescens 100.0
d1nara_289 Seed storage protein {Vicia narbonensis, Narbonin 99.97
d2hvma_273 Hevamine A (chitinase/lysozyme) {Para rubber tree 99.96
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 99.95
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 99.94
d1ta3a_274 Xylanase inhibitor protein I, XIP-I {Wheat (Tritic 99.93
d1cnva_283 Seed storage protein {Jack bean (Canavalia ensifor 99.92
d1eoka_282 Endo-beta-N-acetylglucosaminidase {Flavobacterium 99.76
d1vf8a270 Chitinase-like lectin ym1 {Mouse (Mus musculus) [T 99.37
d1wb0a268 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 99.17
d2pi6a268 Signal processing protein (SPC-40, MGP-40) {Sheep 99.14
d1itxa272 Chitinase A1 {Bacillus circulans [TaxId: 1397]} 98.87
d1edqa373 Chitinase A {Serratia marcescens [TaxId: 615]} 98.77
d1kfwa261 Psychrophilic chitinase B {Arthrobacter sp., tad20 98.6
d1jnda292 Imaginal disc growth factor-2 {Fruit fly (Drosophi 98.44
d1w9pa262 Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} 97.87
d1ll7a262 Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 97.84
d1goia388 Chitinase B {Serratia marcescens [TaxId: 615]} 97.8
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 85.66
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 85.07
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 84.4
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitotriosidase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-56  Score=414.36  Aligned_cols=267  Identities=31%  Similarity=0.489  Sum_probs=232.9

Q ss_pred             EEEEEecCC-------CCCCCCCCCCCCCcEEEEEEEEEeCCCcEEEeCCcchhhHHHHHHHHHhcCCCceEEEEEecCC
Q 041217           29 IKGGYWTSR-------SELPVSQINSGLFTHLTCAFAYLNSSTFTLYINSTYEKSFSSFTNTVKRKNPSVVTLLSIRGGT  101 (383)
Q Consensus        29 ~~~~Y~~~~-------~~~~~~~i~~~~~thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~p~~kvllsigg~~  101 (383)
                      +|+|||++|       ..+.+++||.++||||+|+|+.+++++ .......++..++.+. .+|+++|++||++|||||+
T Consensus         2 kvvcYy~~w~~~~~~~~~~~~~~i~~~~~THi~yaf~~~~~~~-~~~~~~~~~~~~~~~~-~lk~~~p~lKvllSiGG~~   79 (297)
T d1wb0a1           2 KLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQ-LSTTEWNDETLYQEFN-GLKKMNPKLKTLLAIGGWN   79 (297)
T ss_dssp             EEEEEEETTGGGSCGGGCCCGGGCCTTTCSEEEEEEEEEETTE-EECSSTTHHHHHHHHH-HGGGTCTTCEEEEEEECTT
T ss_pred             eEEEEECcCcccCCCCCCCChhHCCcccCCEEEEEEEEccCCc-cccCCcccHHHHHHHH-HHHHhCCCCeEEEEEeccc
Confidence            689999883       357899999999999999999999864 3323333445566665 7999999999999999987


Q ss_pred             c---cchhhhcCchhHHHHHHHHHHHHHHcCCCeEEEeccCCCC----CcchhhHHHHHHHHHHHHHHHhhccCCcceEE
Q 041217          102 A---IFSSMVNQSSNRKSFIESSIETARLYGFQGLDLSGVLPSK----STNMTNLGILFDEWRAEVTSEARNSGNSQLLL  174 (383)
Q Consensus       102 ~---~~~~~~~~~~~r~~f~~~i~~~l~~~~~DGidiD~e~~~~----~~~~~~~~~ll~~l~~~l~~~~~~~~~~~~~l  174 (383)
                      .   .|+.++++++.|++|+++++++|++|+|||||||||+|..    +.++.+|+.|+++||++|+..++..+++.+.+
T Consensus        80 ~~~~~fs~~~~~~~~R~~Fi~siv~~l~~y~fDGiDiDWE~p~~~~~~~~d~~n~~~l~~~Lr~~l~~~~~~~~~~~~~~  159 (297)
T d1wb0a1          80 FGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLL  159 (297)
T ss_dssp             TCSHHHHHHHTSHHHHHHHHHHHHHHHHHTTCCEEEEECSCTTSTTCCTTHHHHHHHHHHHHHHHHHHHHHHHCSCCCEE
T ss_pred             cccchHHHHhhhhHHHHHHHHHHHHHHHHcCCCceeEEEEeccccCCChHHHHHHHHHHHHHHHHHhhhhhhcCCCceeE
Confidence            5   7999999999999999999999999999999999999964    46899999999999999999988777788999


Q ss_pred             EEEecCCCccccCCCChhhhhccccEEEeeeccCCCCCCCCCCCCCCCCCCCCC------CCcHHHHHHHHHHcCCCCCc
Q 041217          175 VMKSHHLPAIDSVTYPIDSMLRNLDWVHVRAYDYYLPSRDNFTGAHSALYSSSS------WFNTNDSIREWLKTGFPANK  248 (383)
Q Consensus       175 s~a~~~~~~~~~~~~~~~~l~~~vD~v~lm~yd~~~~~~~~~~~~~apl~~~~~------~~~~~~~~~~~~~~gvp~~K  248 (383)
                      ++++|+.+......|++.++.+++|+|+||+||++++| +..+++++|++....      .++++.+++.|++.|+|++|
T Consensus       160 s~~~~~~~~~~~~~~~~~~i~~~vD~invmtYD~~g~~-~~~tg~~aply~~~~~~~~~~~~~~d~~v~~~~~~G~p~~K  238 (297)
T d1wb0a1         160 SAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSW-EKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASK  238 (297)
T ss_dssp             EEEECCCHHHHHHHCCHHHHHHHCSEEEECCCCSSCTT-SSBCCCSSCSSCCTTCCGGGGGCSHHHHHHHHHHTTCCGGG
T ss_pred             EEEccCchhHhhhccCHHHHHhhCCEEEEEecccCCCC-CCCCCCCCcCCCCccccCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            99999876655546899999999999999999999998 567899999985433      36899999999999999999


Q ss_pred             EEEecccceeeeeecCCCCCCCCCCCcCCCCCCCCcccHHHHHHHHhhCCCceEEEEcCCceeeEEEeCCEEEEeCCHHH
Q 041217          249 LVLGLPYHGYAWQLVNPNENAVGAPAAGPAITMDGSMGYKSIKAFIRDYGYGVASLYNDSYDVNFFSSGKNWINFDGAEA  328 (383)
Q Consensus       249 ivlglp~yG~~~~~~~~~~~~~~~~~~g~~~~~~g~~~y~ei~~~~~~~~~~~~~~~D~~~~~~y~~~~~~~i~ydd~~S  328 (383)
                      ||||||                                                                    |||++|
T Consensus       239 lvlGip--------------------------------------------------------------------yd~~~s  250 (297)
T d1wb0a1         239 LILGMP--------------------------------------------------------------------TDDVES  250 (297)
T ss_dssp             EEEEEE--------------------------------------------------------------------SCCHHH
T ss_pred             eEEEec--------------------------------------------------------------------cCCHHH
Confidence            999986                                                                    689999


Q ss_pred             HHHHHHHHHHcCCcEEEEEecCCCCChhH-HHHHHHhhc
Q 041217          329 ITAKVSFAKEKGLLGYNAFQLSNDDKWEL-SLAGMQLLI  366 (383)
Q Consensus       329 ~~~K~~~~~~~glgGv~iW~l~~Dd~~~l-~~~~~~~l~  366 (383)
                      ++.|++|++++||||+|+|++++||+.+. |+....||+
T Consensus       251 i~~K~~~~~~~glgGv~~W~l~~DD~~G~~cg~~~~pLl  289 (297)
T d1wb0a1         251 FKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLI  289 (297)
T ss_dssp             HHHHHHHHHHTTCCEEEEECGGGSCTTCSSSSSCSSHHH
T ss_pred             HHHHHHHHHhcCCceEEEEeCccccCCCCcCCCCCccHH
Confidence            99999999999999999999999999985 777655554
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Back     information, alignment and structure
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Back     information, alignment and structure
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Back     information, alignment and structure
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Back     information, alignment and structure
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Back     information, alignment and structure
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Back     information, alignment and structure
>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Back     information, alignment and structure
>d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1w9pa2 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
>d1ll7a2 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Back     information, alignment and structure
>d1goia3 d.26.3.1 (A:292-379) Chitinase B {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure