Citrus Sinensis ID: 041231

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
MAFFKFAITLLLLALISARISLAHPGIGIGWGGNGQYGGSFYGLFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVSEKNSVPNRNSLRGFEVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPLGRRDSRTASLSGSNSNIPPPNSTVQNLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFKQRLYNQNGNNQPDETLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGKGLLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNCRLVN
cccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccEEcccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHccccccHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHcccccccccHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHccEEEHHHcHHHcccHHHcccccccccHHHHHHHHHHcccccccccEEEcccccccccccHHHHHHHccccccHHHHHHHHcccccHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEcccccEccccccccc
MAFFKFAITLLLLALISARISlahpgigigwggngqyggsfyglfpqfyqfscpqvdNIVMSVLQKAIARQPRIAASLLRLHFhdcfvqgcdasvlldDSAAIVseknsvpnrnslrgfEVIDEIKAKLeeacpqtvsCADIVALAARGSvvlsggpswelplgrrdsrtaslsgsnsnipppnstVQNLIASFKrqglnevdlvslsgghtigvARCVTFKQRLynqngnnqpdetlertyyfglksvcprtggdnnispldfaspakfdnTYFKLVLLGKglltsdevlltgdVGNIVQLVKSYAEDDELFFKQFAQSMVkmgnispltgfngevrkncrlvn
MAFFKFAITLLLLALISARISLAHPGIGIGWGGNGQYGGSFYGLFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVseknsvpnrnslrgFEVIDEIKAKLEEACPQTVSCADIVALAARGSVVLsggpswelplgrRDSRTASlsgsnsnipppnsTVQNLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFKQRlynqngnnqpdetLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGKGLLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNispltgfngevrkncrlvn
MaffkfaitllllalisarislaHPgigigwggngqyggsfygLFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVSEKNSVPNRNSLRGFEVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPLGRRDSRTAslsgsnsnipppnsTVQNLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFKQRLYNQNGNNQPDETLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGKGLLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNCRLVN
**FFKFAITLLLLALISARISLAHPGIGIGWGGNGQYGGSFYGLFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVS********NSLRGFEVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSW*****************************NLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFKQRLYNQNG*****ETLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGKGLLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEV********
********TLLLLALISARISLAHPGIGIGWGGNGQYGGSFYGLFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVSEKNSVPNRNSLRGFEVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPLGRRDSRTASLSGSNSNIPPPNSTVQNLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFKQRLYNQNGNNQPDETLERTYYFGLKSVCP***G*NNISPLDFASPAKFDNTYFKLVLLGKGLLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNCRLVN
MAFFKFAITLLLLALISARISLAHPGIGIGWGGNGQYGGSFYGLFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVSEKNSVPNRNSLRGFEVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPLGRR***********SNIPPPNSTVQNLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFKQRLYNQNGNNQPDETLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGKGLLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNCRLVN
MAFFKFAITLLLLALISARISLAHPGIGIGWGGNGQYGGSFYGLFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVSEKNSVPNRNSLRGFEVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPLGRRDSRTASLSGSNSNIPPPNSTVQNLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFKQRLYNQNGNNQPDETLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGKGLLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNC****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAFFKFAITLLLLALISARISLAHPGIGIGWGGNGQYGGSFYGLFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVSEKNSVPNRNSLRGFEVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPLGRRDSRTASLSGSNSNIPPPNSTVQNLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFKQRLYNQNGNNQPDETLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGKGLLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNCRLVN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query345 2.2.26 [Sep-21-2011]
Q96512346 Peroxidase 9 OS=Arabidops yes no 1.0 0.997 0.771 1e-157
Q9FJZ9336 Peroxidase 72 OS=Arabidop no no 0.889 0.913 0.634 1e-113
Q9SI16338 Peroxidase 15 OS=Arabidop no no 0.892 0.911 0.621 1e-113
O23237331 Peroxidase 49 OS=Arabidop no no 0.884 0.921 0.614 1e-110
Q9SI17337 Peroxidase 14 OS=Arabidop no no 0.892 0.913 0.582 1e-105
Q9SD46344 Peroxidase 36 OS=Arabidop no no 0.895 0.898 0.574 1e-101
Q9SLH7336 Peroxidase 20 OS=Arabidop no no 0.852 0.875 0.550 2e-90
Q42578335 Peroxidase 53 OS=Arabidop no no 0.895 0.922 0.514 5e-89
A7NY33321 Peroxidase 4 OS=Vitis vin no no 0.866 0.931 0.503 2e-88
Q9FG34358 Peroxidase 54 OS=Arabidop no no 0.895 0.863 0.504 7e-88
>sp|Q96512|PER9_ARATH Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1 Back     alignment and function desciption
 Score =  554 bits (1427), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 267/346 (77%), Positives = 307/346 (88%), Gaps = 1/346 (0%)

Query: 1   MAFFKFAITLLLLALISARISLAHPGIGIGWGGNGQYGGSFYG-LFPQFYQFSCPQVDNI 59
           MA  K   TL+L  L S  +S+AHPG+G GWG N   GGSFY  L+PQFYQFSCPQ D I
Sbjct: 1   MAISKLIPTLVLFVLFSFDVSVAHPGLGFGWGSNSPIGGSFYSNLYPQFYQFSCPQADEI 60

Query: 60  VMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVSEKNSVPNRNSLRGF 119
           VM+VL+KAIA++PR+AASLLRLHFHDCFVQGCDAS+LLDDSA I SEKN+ PN+NS+RGF
Sbjct: 61  VMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGF 120

Query: 120 EVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPLGRRDSRTASLSGSNSN 179
           +VIDEIKAKLE+ACPQTVSCADI+ALAARGS +LSGGPSWELPLGRRDSRTASL+G+N+N
Sbjct: 121 QVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTN 180

Query: 180 IPPPNSTVQNLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFKQRLYNQNGNNQPDETLE 239
           IP PNST+QNL+  F+R+GLNE DLVSLSGGHTIGVARC TFKQRLYNQNGNNQPDETLE
Sbjct: 181 IPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLE 240

Query: 240 RTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGKGLLTSDEVLLTGDVGNI 299
           R+YY+GL+S+CP TGGDNNISPLD ASPA+FDNTYFKL+L GKGLLTSDEVLLTG+VG  
Sbjct: 241 RSYYYGLRSICPPTGGDNNISPLDLASPARFDNTYFKLLLWGKGLLTSDEVLLTGNVGKT 300

Query: 300 VQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNCRLVN 345
             LVK+YAED+ LFF+QFA+SMV MGNI PLTGFNGE+RK+C ++N
Sbjct: 301 GALVKAYAEDERLFFQQFAKSMVNMGNIQPLTGFNGEIRKSCHVIN 346
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q9FJZ9|PER72_ARATH Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1 Back     alignment and function description
>sp|Q9SI16|PER15_ARATH Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1 Back     alignment and function description
>sp|O23237|PER49_ARATH Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2 Back     alignment and function description
>sp|Q9SI17|PER14_ARATH Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=3 SV=1 Back     alignment and function description
>sp|Q9SD46|PER36_ARATH Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2 Back     alignment and function description
>sp|Q9SLH7|PER20_ARATH Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1 Back     alignment and function description
>sp|Q42578|PER53_ARATH Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1 Back     alignment and function description
>sp|A7NY33|PER4_VITVI Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1 Back     alignment and function description
>sp|Q9FG34|PER54_ARATH Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query345
225458169346 PREDICTED: peroxidase 9 [Vitis vinifera] 1.0 0.997 0.763 1e-155
15219493346 peroxidase 9 [Arabidopsis thaliana] gi|2 1.0 0.997 0.771 1e-155
21554765346 peroxidase, putative [Arabidopsis thalia 1.0 0.997 0.765 1e-154
297846850346 hypothetical protein ARALYDRAFT_891426 [ 1.0 0.997 0.768 1e-154
993004325 PRX [Mercurialis annua] 0.924 0.981 0.773 1e-147
255538756344 Peroxidase 9 precursor, putative [Ricinu 0.979 0.982 0.772 1e-146
356553852334 PREDICTED: peroxidase 9-like [Glycine ma 0.953 0.985 0.754 1e-143
224062081303 predicted protein [Populus trichocarpa] 0.878 1.0 0.828 1e-143
357438101347 Peroxidase like protein [Medicago trunca 0.994 0.988 0.719 1e-136
14031051329 peroxidase [Nicotiana tabacum] 0.950 0.996 0.667 1e-136
>gi|225458169|ref|XP_002281048.1| PREDICTED: peroxidase 9 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 264/346 (76%), Positives = 301/346 (86%), Gaps = 1/346 (0%)

Query: 1   MAFFKFAITLLLL-ALISARISLAHPGIGIGWGGNGQYGGSFYGLFPQFYQFSCPQVDNI 59
           MAFFK   +  +L A  S+  SLAHPG+  GW G+   GG F GLFP FYQ SCPQ ++I
Sbjct: 1   MAFFKVLSSFFMLTAFHSSTFSLAHPGVDFGWDGSFHPGGGFSGLFPGFYQCSCPQANDI 60

Query: 60  VMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVSEKNSVPNRNSLRGF 119
           V+SVL+KAIA++PR+AASLLRLHFHDCFVQGCDAS+LLDDSA+IVSEK S PN+NS+RGF
Sbjct: 61  VLSVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSASIVSEKGSGPNKNSIRGF 120

Query: 120 EVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPLGRRDSRTASLSGSNSN 179
           EVIDEIKAKLEEACPQTVSCADI+ALAARGS VLSGGP WELPLGRRDS+TASL+GSN+N
Sbjct: 121 EVIDEIKAKLEEACPQTVSCADILALAARGSTVLSGGPFWELPLGRRDSKTASLTGSNNN 180

Query: 180 IPPPNSTVQNLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFKQRLYNQNGNNQPDETLE 239
           IP PNST+QNLI  FKRQGL+EVDLV+LSGGHTIG+ARCVTFKQRLYNQNG+NQPDETLE
Sbjct: 181 IPAPNSTLQNLITLFKRQGLDEVDLVALSGGHTIGMARCVTFKQRLYNQNGDNQPDETLE 240

Query: 240 RTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGKGLLTSDEVLLTGDVGNI 299
           + YY GLKSVCP++GGDNNISPLDFASPAKFDNTYFKL+L G+GLLTSDEVLLTG+V   
Sbjct: 241 KAYYNGLKSVCPKSGGDNNISPLDFASPAKFDNTYFKLILWGRGLLTSDEVLLTGNVDKT 300

Query: 300 VQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNCRLVN 345
            +LV+ +AED+ LF  QFA SMVKMGNISPLT  NGE+R NC  +N
Sbjct: 301 EELVRRFAEDEALFLNQFATSMVKMGNISPLTALNGEIRTNCHRIN 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|15219493|ref|NP_175117.1| peroxidase 9 [Arabidopsis thaliana] gi|25453202|sp|Q96512.1|PER9_ARATH RecName: Full=Peroxidase 9; Short=Atperox P9; AltName: Full=ATP18a; Flags: Precursor gi|7767656|gb|AAF69153.1|AC007915_5 F27F5.6 [Arabidopsis thaliana] gi|1546700|emb|CAA67336.1| peroxidase [Arabidopsis thaliana] gi|30793970|gb|AAP40436.1| putative peroxidase [Arabidopsis thaliana] gi|110736877|dbj|BAF00396.1| peroxidase like protein [Arabidopsis thaliana] gi|332193948|gb|AEE32069.1| peroxidase 9 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21554765|gb|AAM63684.1| peroxidase, putative [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297846850|ref|XP_002891306.1| hypothetical protein ARALYDRAFT_891426 [Arabidopsis lyrata subsp. lyrata] gi|297337148|gb|EFH67565.1| hypothetical protein ARALYDRAFT_891426 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|993004|emb|CAA62615.1| PRX [Mercurialis annua] Back     alignment and taxonomy information
>gi|255538756|ref|XP_002510443.1| Peroxidase 9 precursor, putative [Ricinus communis] gi|223551144|gb|EEF52630.1| Peroxidase 9 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356553852|ref|XP_003545265.1| PREDICTED: peroxidase 9-like [Glycine max] Back     alignment and taxonomy information
>gi|224062081|ref|XP_002300745.1| predicted protein [Populus trichocarpa] gi|222842471|gb|EEE80018.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357438101|ref|XP_003589326.1| Peroxidase like protein [Medicago truncatula] gi|358348474|ref|XP_003638271.1| Peroxidase like protein [Medicago truncatula] gi|355478374|gb|AES59577.1| Peroxidase like protein [Medicago truncatula] gi|355504206|gb|AES85409.1| Peroxidase like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|14031051|gb|AAK52085.1| peroxidase [Nicotiana tabacum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query345
TAIR|locus:2028280346 AT1G44970 [Arabidopsis thalian 0.875 0.872 0.774 1.4e-128
TAIR|locus:2154925336 AT5G66390 [Arabidopsis thalian 0.872 0.895 0.605 2.6e-95
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.872 0.890 0.589 3.8e-94
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.872 0.909 0.586 6.1e-94
TAIR|locus:2053139337 AT2G18140 [Arabidopsis thalian 0.872 0.893 0.576 1.2e-90
TAIR|locus:2080928344 AT3G50990 [Arabidopsis thalian 0.872 0.875 0.552 1.6e-86
TAIR|locus:2062420336 AT2G35380 [Arabidopsis thalian 0.875 0.898 0.539 1.5e-76
TAIR|locus:2170204335 PA2 "peroxidase 2" [Arabidopsi 0.863 0.889 0.5 1e-75
TAIR|locus:2057165349 AT2G38390 [Arabidopsis thalian 0.875 0.865 0.481 2.1e-75
TAIR|locus:2170214358 AT5G06730 [Arabidopsis thalian 0.863 0.832 0.489 4.5e-75
TAIR|locus:2028280 AT1G44970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1262 (449.3 bits), Expect = 1.4e-128, P = 1.4e-128
 Identities = 234/302 (77%), Positives = 267/302 (88%)

Query:    44 LFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAI 103
             L+PQFYQFSCPQ D IVM+VL+KAIA++PR+AASLLRLHFHDCFVQGCDAS+LLDDSA I
Sbjct:    45 LYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATI 104

Query:   104 VSEKNSVPNRNSLRGFEVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPL 163
              SEKN+ PN+NS+RGF+VIDEIKAKLE+ACPQTVSCADI+ALAARGS +LSGGPSWELPL
Sbjct:   105 RSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPL 164

Query:   164 GRRDSRTAXXXXXXXXXXXXXXTVQNLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFKQ 223
             GRRDSRTA              T+QNL+  F+R+GLNE DLVSLSGGHTIGVARC TFKQ
Sbjct:   165 GRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQ 224

Query:   224 RLYNQNGNNQPDETLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGKG 283
             RLYNQNGNNQPDETLER+YY+GL+S+CP TGGDNNISPLD ASPA+FDNTYFKL+L GKG
Sbjct:   225 RLYNQNGNNQPDETLERSYYYGLRSICPPTGGDNNISPLDLASPARFDNTYFKLLLWGKG 284

Query:   284 LLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNCRL 343
             LLTSDEVLLTG+VG    LVK+YAED+ LFF+QFA+SMV MGNI PLTGFNGE+RK+C +
Sbjct:   285 LLTSDEVLLTGNVGKTGALVKAYAEDERLFFQQFAKSMVNMGNIQPLTGFNGEIRKSCHV 344

Query:   344 VN 345
             +N
Sbjct:   345 IN 346
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2154925 AT5G66390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053139 AT2G18140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080928 AT3G50990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062420 AT2G35380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170204 PA2 "peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057165 AT2G38390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170214 AT5G06730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P59121PERE5_ARMRU1, ., 1, 1, ., 1, ., 70.50160.87530.9869N/Ano
Q42517PERN_ARMRU1, ., 1, 1, ., 1, ., 70.50980.85790.9051N/Ano
P80679PERA2_ARMRU1, ., 1, 1, ., 1, ., 70.52680.86370.9770N/Ano
Q96512PER9_ARATH1, ., 1, 1, ., 1, ., 70.77161.00.9971yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.979
3rd Layer1.11.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-171
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 5e-83
pfam00141180 pfam00141, peroxidase, Peroxidase 3e-68
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 5e-33
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 3e-21
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 5e-18
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 1e-12
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 7e-11
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 1e-08
cd00692328 cd00692, ligninase, Ligninase and other manganese- 5e-05
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  478 bits (1232), Expect = e-171
 Identities = 165/302 (54%), Positives = 209/302 (69%), Gaps = 4/302 (1%)

Query: 43  GLFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAA 102
            L   FY  SCP  ++IV SV++ A+   PR+AA+LLRLHFHDCFV+GCDASVLLD +A 
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 103 IVSEKNSVPNRNSLRGFEVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELP 162
             SEK++ PN  SLRGF+VID+IKA LE ACP  VSCADI+ALAAR +VVL+GGPS+E+P
Sbjct: 61  NTSEKDAPPNL-SLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVP 119

Query: 163 LGRRDSRTASLSGSNSNIPPPNSTVQNLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFK 222
           LGRRD R  S +    N+P P  +V  LI+ F  +GL   DLV+LSG HTIG A C +F 
Sbjct: 120 LGRRDGR-VSSANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFS 178

Query: 223 QRLYNQNGNNQPDETLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGK 282
            RLYN +G   PD TL+  Y   L+  CP  G D+ + PLD  +P  FDN+Y+K +L G+
Sbjct: 179 DRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGR 238

Query: 283 GLLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNCR 342
           GLLTSD+ LL+        +V  YA + + FF+ FA +MVKMGNI  LTG  GE+RKNCR
Sbjct: 239 GLLTSDQALLSD--PRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCR 296

Query: 343 LV 344
           +V
Sbjct: 297 VV 298

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 345
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.96
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.44
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=8.8e-106  Score=773.45  Aligned_cols=298  Identities=43%  Similarity=0.750  Sum_probs=283.5

Q ss_pred             ccCcccccccCCChhHHHHHHHHHHHHHHhCCCcchhhHHhhhccccccCCCceeecCCCcccccccCCCCCCCchhhHH
Q 041231           41 FYGLFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVSEKNSVPNRNSLRGFE  120 (345)
Q Consensus        41 ~~~L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDcfv~GCDgSill~~~~~~~~E~~~~~N~~~l~g~~  120 (345)
                      ..+|+++||++|||++|+||++.|++++.+||+++|++|||+||||||+||||||||+++   .+||++++|. +++||+
T Consensus        22 ~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~-~l~Gf~   97 (324)
T PLN03030         22 GQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNL-LLRGYD   97 (324)
T ss_pred             hccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCc-CcchHH
Confidence            346999999999999999999999999999999999999999999999999999999865   3699999998 789999


Q ss_pred             HHHHHHHHHHhhCCCccCHHhHHHHhhhhhhhhcCCCCcccCCCCcCCCCcccCCCCCCCCCCCCCHHHHHHHHHHcCCC
Q 041231          121 VIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPLGRRDSRTASLSGSNSNIPPPNSTVQNLIASFKRQGLN  200 (345)
Q Consensus       121 ~I~~iK~~le~~cp~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls  200 (345)
                      +|+.||++||++||++|||||||+|||||||+++|||.|+|++||||+++|.+.++. +||.|+.++++|++.|+++||+
T Consensus        98 ~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~  176 (324)
T PLN03030         98 VIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGLN  176 (324)
T ss_pred             HHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999999999999999999877775 8999999999999999999999


Q ss_pred             ccccccccccceeccccccccccccccCCCCC-CCCCcccHHHHHHhhhcCCCCCCCCCCCCCCCCCCCccChHHHHHHh
Q 041231          201 EVDLVSLSGGHTIGVARCVTFKQRLYNQNGNN-QPDETLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVL  279 (345)
Q Consensus       201 ~~dlVaLsGaHTiG~ahc~~f~~Rl~~~~g~~-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~Tp~~FDn~Yy~~l~  279 (345)
                      .+|||+||||||||++||.+|.+|||||.|++ .+||+||+.|++.|++.||..++++..++||+.||.+|||+||+||+
T Consensus       177 ~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nll  256 (324)
T PLN03030        177 TQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNLK  256 (324)
T ss_pred             HHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHHH
Confidence            99999999999999999999999999999875 58999999999999999996433345789999999999999999999


Q ss_pred             hcCcccccchhhccCchhhHHHHHHHHhhCH----HHHHHHHHHHHHHhhcCCCCCCCCCccccccccCC
Q 041231          280 LGKGLLTSDEVLLTGDVGNIVQLVKSYAEDD----ELFFKQFAQSMVKMGNISPLTGFNGEVRKNCRLVN  345 (345)
Q Consensus       280 ~~~glL~SD~~L~~d~~~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  345 (345)
                      .++|+|+|||+|+.|+  +|+++|++||.|+    +.|+++|++||+|||+|+|+||.+||||++|+++|
T Consensus       257 ~~rGlL~SDq~L~~d~--~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        257 NGRGILESDQKLWTDA--STRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             hcCCCcCCchHhhcCc--cHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            9999999999999999  9999999999875    59999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 3e-84
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 3e-78
1sch_A294 Peanut Peroxidase Length = 294 9e-78
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 1e-76
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 2e-76
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 2e-76
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 2e-76
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 3e-76
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 4e-76
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 4e-76
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 4e-76
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 4e-76
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 6e-76
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 1e-75
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 2e-75
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 3e-75
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 2e-74
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 1e-65
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 1e-57
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 9e-11
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 3e-09
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 9e-09
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 1e-08
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 1e-08
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 1e-08
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 1e-08
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 1e-08
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 1e-08
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 1e-08
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 1e-08
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 1e-08
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 8e-08
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 7e-07
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 7e-07
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 8e-07
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure 
Iteration: 1

 Score =  308 bits (788), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 191/298 (64%)
Query: 48  FYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVSEK 107
           FY  +CP    IV S +Q+A+    RI ASL+RLHFHDCFV GCDAS+LLDD+ +I SEK
Sbjct: 7   FYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEK 66
Query: 108 NSVPNRNSLRGFEVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPLGRRD 167
           N+ PN NS RGF V+D IK  LE ACP  VSC+D++ALA+  SV L+GGPSW + LGRRD
Sbjct: 67  NAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRD 126
Query: 168 SRTAXXXXXXXXXXXXXXTVQNLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFKQRLYN 227
           S TA              ++ N+   F   GLN  DLV+LSG HT G ARC  F  RL+N
Sbjct: 127 SLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFN 186
Query: 228 QNGNNQPDETLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGKGLLTS 287
            +G   PD TL  T    L+ +CP+ G  + I+ LD ++P  FDN YF  +    GLL S
Sbjct: 187 FSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQS 246
Query: 288 DEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNCRLVN 345
           D+ L +    + + +V S+A +  LFF+ FAQSM+ MGNISPLTG NGE+R +C+ VN
Sbjct: 247 DQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVN 304
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 0.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 0.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 0.0
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 0.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 0.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-180
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-176
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 1e-100
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 9e-73
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 1e-70
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 4e-67
2e39_A344 Peroxidase; heme protein, coordination geometry of 1e-63
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 5e-62
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 7e-62
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 7e-20
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 1e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 1e-05
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
 Score =  526 bits (1357), Expect = 0.0
 Identities = 157/302 (51%), Positives = 203/302 (67%)

Query: 44  LFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAI 103
           L   FY  +CP    IV S +Q+A+    RI ASL+RLHFHDCFV GCDAS+LLDD+ +I
Sbjct: 3   LNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSI 62

Query: 104 VSEKNSVPNRNSLRGFEVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPL 163
            SEKN+ PN NS RGF V+D IK  LE ACP  VSC+D++ALA+  SV L+GGPSW + L
Sbjct: 63  QSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLL 122

Query: 164 GRRDSRTASLSGSNSNIPPPNSTVQNLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFKQ 223
           GRRDS TA+L+G+NS+IP P  ++ N+   F   GLN  DLV+LSG HT G ARC  F  
Sbjct: 123 GRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNN 182

Query: 224 RLYNQNGNNQPDETLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGKG 283
           RL+N +G   PD TL  T    L+ +CP+ G  + I+ LD ++P  FDN YF  +    G
Sbjct: 183 RLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDG 242

Query: 284 LLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNCRL 343
           LL SD+ L +    + + +V S+A +  LFF+ FAQSM+ MGNISPLTG NGE+R +C+ 
Sbjct: 243 LLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKK 302

Query: 344 VN 345
           VN
Sbjct: 303 VN 304
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query345
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=6.1e-110  Score=799.22  Aligned_cols=300  Identities=46%  Similarity=0.756  Sum_probs=291.9

Q ss_pred             cccccccCCChhHHHHHHHHHHHHHHhCCCcchhhHHhhhccccccCCCceeecCCCcccccccCCCCCCCchhhHHHHH
Q 041231           44 LFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVSEKNSVPNRNSLRGFEVID  123 (345)
Q Consensus        44 L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDcfv~GCDgSill~~~~~~~~E~~~~~N~~~l~g~~~I~  123 (345)
                      |+++||++|||++|+|||+.|++++.+||+++|++|||+||||||+||||||||++++++.+||++++|.++++||++||
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            78999999999999999999999999999999999999999999999999999999988889999999987789999999


Q ss_pred             HHHHHHHhhCCCccCHHhHHHHhhhhhhhhcCCCCcccCCCCcCCCCcccCCCCCCCCCCCCCHHHHHHHHHHcCCCccc
Q 041231          124 EIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPLGRRDSRTASLSGSNSNIPPPNSTVQNLIASFKRQGLNEVD  203 (345)
Q Consensus       124 ~iK~~le~~cp~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d  203 (345)
                      +||++||++||++|||||||+||||+||+++|||.|+|++||||+.+++..+++.+||+|+.++++|++.|++|||+++|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            99999999999999999999999999999999999999999999999988777778999999999999999999999999


Q ss_pred             cccccccceeccccccccccccccCCCCCCCCCcccHHHHHHhhhcCCCCCC--CCCCCCCCCCCCCccChHHHHHHhhc
Q 041231          204 LVSLSGGHTIGVARCVTFKQRLYNQNGNNQPDETLERTYYFGLKSVCPRTGG--DNNISPLDFASPAKFDNTYFKLVLLG  281 (345)
Q Consensus       204 lVaLsGaHTiG~ahc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~--~~~~~~~D~~Tp~~FDn~Yy~~l~~~  281 (345)
                      |||||||||||++||.+|.+|||||+|++.+||+||+.|++.|+..||..++  +++.++||+.||.+|||+||++|+.+
T Consensus       162 ~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~~~  241 (304)
T 3hdl_A          162 MVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT  241 (304)
T ss_dssp             HHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHHHTT
T ss_pred             hhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHHHhC
Confidence            9999999999999999999999999998889999999999999999998766  67788999999999999999999999


Q ss_pred             CcccccchhhccCchhhHHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCCCccccccccCC
Q 041231          282 KGLLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNCRLVN  345 (345)
Q Consensus       282 ~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  345 (345)
                      +|||+|||+|+.|+  +|+++|++||.|++.||++|++||+||++|||+||++||||++|+++|
T Consensus       242 ~glL~SDq~L~~d~--~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          242 LGLLTSDQALVTEA--NLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN  303 (304)
T ss_dssp             CCCSHHHHGGGSSH--HHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             cCCCCCCHHHhcCc--cHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccC
Confidence            99999999999999  999999999999999999999999999999999999999999999998
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 345
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-133
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-130
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-125
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-123
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-121
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-114
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 5e-67
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 3e-66
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 6e-65
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 8e-49
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 1e-46
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 2e-38
d2ccaa2285 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Myc 3e-04
d1mwva2308 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Bur 4e-04
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  379 bits (974), Expect = e-133
 Identities = 149/302 (49%), Positives = 201/302 (66%)

Query: 44  LFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAI 103
           L P FY+ +CP +  IV  V+  A    PRI ASL+RLHFHDCFVQGCD SVLL+++  I
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61

Query: 104 VSEKNSVPNRNSLRGFEVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPL 163
            SE++++PN NS+RG +V+++IK  +E +CP TVSCADI+A+AA  + VL GGP W +PL
Sbjct: 62  ESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPL 121

Query: 164 GRRDSRTASLSGSNSNIPPPNSTVQNLIASFKRQGLNEVDLVSLSGGHTIGVARCVTFKQ 223
           GRRDS TA+ + +N N+P P   +  L ASF  QGLN +DLV+LSGGHT G ARC TF  
Sbjct: 122 GRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFIN 181

Query: 224 RLYNQNGNNQPDETLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGKG 283
           RLYN +    PD TL  TY   L++ CP+    +N++ LD ++P +FDN Y+  +L   G
Sbjct: 182 RLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLNG 241

Query: 284 LLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNCRL 343
           LL SD+ L +    + + +V S++ +   FF  F  SM+KMGNI  LTG  GE+R  C  
Sbjct: 242 LLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNF 301

Query: 344 VN 345
           VN
Sbjct: 302 VN 303
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 285 Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 308 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query345
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.98
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=2.6e-105  Score=767.36  Aligned_cols=303  Identities=49%  Similarity=0.866  Sum_probs=294.0

Q ss_pred             CcccccccCCChhHHHHHHHHHHHHHHhCCCcchhhHHhhhccccccCCCceeecCCCcccccccCCCCCCCchhhHHHH
Q 041231           43 GLFPQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVSEKNSVPNRNSLRGFEVI  122 (345)
Q Consensus        43 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDcfv~GCDgSill~~~~~~~~E~~~~~N~~~l~g~~~I  122 (345)
                      ||+++||++|||++|+||+++|++.+.+||+++|++|||+||||||+||||||||+++.++.+|+++++|.++++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            79999999999999999999999999999999999999999999999999999999988888999999999888999999


Q ss_pred             HHHHHHHHhhCCCccCHHhHHHHhhhhhhhhcCCCCcccCCCCcCCCCcccCCCCCCCCCCCCCHHHHHHHHHHcCCCcc
Q 041231          123 DEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPLGRRDSRTASLSGSNSNIPPPNSTVQNLIASFKRQGLNEV  202 (345)
Q Consensus       123 ~~iK~~le~~cp~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~  202 (345)
                      |.||++||..||++|||||||+||||+||+++|||.|+|++||+|+.+|+..++..+||.|+.++++|++.|++||||.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            99999999999999999999999999999999999999999999999998777777899999999999999999999999


Q ss_pred             ccccccccceeccccccccccccccCCCCCCCCCcccHHHHHHhhhcCCCCCCCCCCCCCCCCCCCccChHHHHHHhhcC
Q 041231          203 DLVSLSGGHTIGVARCVTFKQRLYNQNGNNQPDETLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGK  282 (345)
Q Consensus       203 dlVaLsGaHTiG~ahc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~Tp~~FDn~Yy~~l~~~~  282 (345)
                      |||||+||||||++||.+|.+|+|+|.+++.+||++|+.|+..|+..||..+.....+.+|..||.+|||+||++++.++
T Consensus       161 d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l~~~~  240 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLN  240 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCCEEESCSSSTTSCSTHHHHHHHTTC
T ss_pred             HHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCcccccCCCCCCccccHHHHHHhhcC
Confidence            99999999999999999999999999999899999999999999999998777777889999999999999999999999


Q ss_pred             cccccchhhccCchhhHHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCCCccccccccCC
Q 041231          283 GLLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISPLTGFNGEVRKNCRLVN  345 (345)
Q Consensus       283 glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  345 (345)
                      |+|+|||+|+.||+++|+++|++||.|++.|+++|++||+||++||||||.+||||++|+++|
T Consensus       241 glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N  303 (304)
T d1fhfa_         241 GLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVN  303 (304)
T ss_dssp             CSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             cccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcC
Confidence            999999999999755799999999999999999999999999999999999999999999998
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure