Citrus Sinensis ID: 041282

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140----
Protein Sequence
MAEHYQPHEQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQFGQQQSTGSQPGS
Secondary Structure (PSIPRED)
cccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHEEEHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
maehyqpheqtqlqsrqprshQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYvtgghppgadQLEQARMKLASKAREMRDRAEqfgqqqstgsqpgs
Flexible Loop (DISEMBL)
maehyqpheqtqlqsrqprSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGghppgadqlEQARMKLASKAREMRDRAeqfgqqqstgsqpgs
Low Complexity Region (SEG)
MAEHYQPHEQTQLQSRQPRSHQvvkaatavtaGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEqfgqqqstgsqpgs
Disordered region (IsUnstruct)
***********************VKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGG*****************************************
Disordered Region (DISOPRED)
*************************AATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRY*********************************************
Disordered Region (DISEMBL)
**************************ATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKL**************************
Disordered Region (DISPRO)
*****************PRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQFGQQQSTGS****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAEHYQPHEQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGxxxxxxxxxxxxxxxxxxxxxAEQFGQQQSTGSQPGS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	144	2.2.26 [Sep-21-2011]
P29525	173	Oleosin 18.5 kDa OS=Arabi	yes	no	0.951	0.791	0.628	1e-40
P29111	175	Major oleosin NAP-II (Fra	N/A	no	0.951	0.782	0.623	3e-40
P29110	195	Oleosin Bn-III OS=Brassic	N/A	no	0.930	0.687	0.629	5e-40
Q43804	148	Oleosin 1 OS=Prunus dulci	N/A	no	0.923	0.898	0.755	9e-40
Q43284	141	Oleosin 14.9 kDa OS=Arabi	no	no	0.902	0.921	0.593	9e-39
P29109	183	Oleosin Bn-V (Fragment) O	N/A	no	0.826	0.650	0.680	1e-37
Q42980	148	Oleosin 16 kDa OS=Oryza s	yes	no	0.819	0.797	0.610	6e-34
Q96543	167	Oleosin 16 kDa OS=Bromus	N/A	no	0.888	0.766	0.612	2e-33
P13436	156	Oleosin Zm-I OS=Zea mays	N/A	no	0.861	0.794	0.604	3e-31
Q9SS98	183	Oleosin 5 OS=Arabidopsis	no	no	0.798	0.628	0.428	1e-19

>sp|P29525|OLEO1_ARATH Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25140 PE=1 SV=1

 Score =  164 bits (416), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 88/140 (62%), Positives = 112/140 (80%), Gaps = 3/140 (2%)

Query: 6   QPHEQTQLQSR---QPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICS 62
           +  +Q Q+  R     +S Q+ KAATAVTAGGSLLVLS LT+ GTVIALT+ATPLLVI S
Sbjct: 23  RDRDQYQMSGRGSDYSKSRQIAKAATAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFS 82

Query: 63  PVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKA 122
           P+LVPA+ITV+LLI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL SKA
Sbjct: 83  PILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKA 142

Query: 123 REMRDRAEQFGQQQSTGSQP 142
           ++++DRA+ +GQQ + G   
Sbjct: 143 QDLKDRAQYYGQQHTGGEHD 162

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.
Arabidopsis thaliana (taxid: 3702)

>sp|P29111|OLEO2_BRANA Major oleosin NAP-II (Fragment) OS=Brassica napus PE=1 SV=1

 Score =  163 bits (413), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 86/138 (62%), Positives = 109/138 (78%), Gaps = 1/138 (0%)

Query: 6   QPHEQTQLQSRQ-PRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPV 64
           +  +Q  +  R   +S Q+ KA TAVTAGGSLLVLS LT+ GTVIALT+ATPLLVI SP+
Sbjct: 27  RDRDQYNMYGRDYSKSRQIAKAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPI 86

Query: 65  LVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKARE 124
           LVPA+ITV+LLI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  K ++
Sbjct: 87  LVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGGKVQD 146

Query: 125 MRDRAEQFGQQQSTGSQP 142
           M+DRA+ +GQQQ+ G   
Sbjct: 147 MKDRAQYYGQQQTGGEDD 164

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Brassica napus (taxid: 3708)

>sp|P29110|OLEO3_BRANA Oleosin Bn-III OS=Brassica napus PE=2 SV=1

 Score =  162 bits (410), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 85/135 (62%), Positives = 110/135 (81%), Gaps = 1/135 (0%)

Query: 6   QPHEQTQLQSRQ-PRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPV 64
           +  +Q  +  R   +S Q+ KA TAVTAGGSLLVLS LT+ GTVIALT+ATPLLVI SP+
Sbjct: 39  RDRDQYNMYGRDYSKSRQIAKAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPI 98

Query: 65  LVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKARE 124
           LVPA+ITV++LI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL SKA++
Sbjct: 99  LVPALITVAMLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQD 158

Query: 125 MRDRAEQFGQQQSTG 139
           ++DRA+ +GQQ + G
Sbjct: 159 LKDRAQYYGQQHTGG 173

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Brassica napus (taxid: 3708)

>sp|Q43804|OLEO1_PRUDU Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1

 Score =  161 bits (408), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 102/135 (75%), Positives = 117/135 (86%), Gaps = 2/135 (1%)

Query: 3   EHYQP--HEQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60
           +H+Q   H Q     +QPRS+QV KAATAVTAGGSLLVLSGL +AGTVIALTIATPLLVI
Sbjct: 4   QHFQQPLHFQGSYGQQQPRSYQVAKAATAVTAGGSLLVLSGLVLAGTVIALTIATPLLVI 63

Query: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAS 120
            SPVLVPA+ITV+L+ MGFL SGGFGVAA++VLSWIY+YVTG  PPGADQL+QAR KLA 
Sbjct: 64  FSPVLVPALITVALITMGFLTSGGFGVAAVTVLSWIYKYVTGKQPPGADQLDQARHKLAG 123

Query: 121 KAREMRDRAEQFGQQ 135
           KAR+++DRAEQFGQQ
Sbjct: 124 KARDIKDRAEQFGQQ 138

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Prunus dulcis (taxid: 3755)

>sp|Q43284|OLEO3_ARATH Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE=2 SV=2

 Score =  158 bits (400), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 79/133 (59%), Positives = 103/133 (77%), Gaps = 3/133 (2%)

Query: 4   HYQPHEQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSP 63
           H++   +   Q   P++ Q+VKAATAVTAGGSLLVLSGLT+AGTVIALT+ATPLLVI SP
Sbjct: 8   HHEMISRDSTQEAHPKARQMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSP 67

Query: 64  VLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAR 123
           VLVPAV+TV+L+I GFLASGGFG+AAI+  SW+YR++TG    G+D++E ARMK+ S+ +
Sbjct: 68  VLVPAVVTVALIITGFLASGGFGIAAITAFSWLYRHMTG---SGSDKIENARMKVGSRVQ 124

Query: 124 EMRDRAEQFGQQQ 136
           + +      G Q 
Sbjct: 125 DTKYGQHNIGVQH 137

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Arabidopsis thaliana (taxid: 3702)

>sp|P29109|OLEO5_BRANA Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=1

 Score =  154 bits (390), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 81/119 (68%), Positives = 100/119 (84%)

Query: 19  RSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMG 78
           +S Q+ KA TAVTAG SLLVLS LT+ GTVIAL +ATPLLVI SP+LVPA+ITV+LLI G
Sbjct: 41  KSRQIAKATTAVTAGDSLLVLSSLTLVGTVIALIVATPLLVIFSPILVPALITVALLITG 100

Query: 79  FLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQFGQQQS 137
           FL+SG FG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL SKA++M+DRA  +GQQ +
Sbjct: 101 FLSSGAFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDMKDRAYYYGQQHT 159

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Brassica napus (taxid: 3708)

>sp|Q42980|OLEO1_ORYSJ Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=OLE16 PE=2 SV=2

 Score =  142 bits (358), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 72/118 (61%), Positives = 94/118 (79%)

Query: 14  QSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVS 73
           Q +Q      +K  TA TAGGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++
Sbjct: 23  QEKQRFMMTALKTVTAATAGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALA 82

Query: 74  LLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQ 131
           L+  GF+ SGG GVAA+SV SW+Y+Y+TG HPPGADQL+ A+ +LASKAR++++ A+ 
Sbjct: 83  LMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPGADQLDHAKARLASKARDIKEAAQH 140

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q96543|OLE16_BROSE Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 SV=1

 Score =  140 bits (353), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/129 (61%), Positives = 103/129 (79%), Gaps = 1/129 (0%)

Query: 12  QLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVIT 71
           Q Q +QP     +KAATA TAGGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I+
Sbjct: 40  QHQQKQPVMMCALKAATAATAGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIS 99

Query: 72  VSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQ 131
           ++L+  GF+ SGG GVAA+SV SW+Y+Y+ G HPPGADQL+ A+ +LASKAR+++D A Q
Sbjct: 100 MALMSAGFVTSGGLGVAAVSVFSWMYKYLAGKHPPGADQLDHAKARLASKARDIKD-AAQ 158

Query: 132 FGQQQSTGS 140
              +Q+ G+
Sbjct: 159 IRVEQAQGA 167

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Bromus secalinus (taxid: 4502)

>sp|P13436|OLEO1_MAIZE Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2

 Score =  133 bits (335), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/124 (60%), Positives = 97/124 (78%)

Query: 8   HEQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVP 67
           H + Q Q +Q      +KAATA T GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVP
Sbjct: 25  HGEAQQQQKQGAMMTALKAATAATFGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVP 84

Query: 68  AVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRD 127
           A I ++L+  GF+ SGG GVAA+SV SW+Y+Y+TG HPP ADQL+ A+ +LASKAR+++D
Sbjct: 85  AAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPAADQLDHAKARLASKARDVKD 144

Query: 128 RAEQ 131
            A+ 
Sbjct: 145 AAQH 148

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Zea mays (taxid: 4577)

>sp|Q9SS98|OLEO5_ARATH Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=1 SV=1

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/119 (42%), Positives = 74/119 (62%), Gaps = 4/119 (3%)

Query: 18  PRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIM 77
           P S QV+     V  GG+LL ++GLT+AG+VI L +A PL +I SPV+VPA   + L + 
Sbjct: 32  PSSTQVLAVFVGVPIGGTLLTIAGLTLAGSVIGLMLAFPLFLIFSPVIVPAAFVIGLAMT 91

Query: 78  GFLASGGFGVAAISVLSWIYRYV--TGGHPPGADQLEQARMKLASKAREMRDRAEQFGQ 134
           GFLASG  G+  +S +SW+  Y+   G H P  ++LE+A+ +LA  A  +  R +  GQ
Sbjct: 92  GFLASGAIGLTGLSSMSWVLNYIRRAGQHIP--EELEEAKHRLADMAEYVGQRTKDAGQ 148

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
683553	144	oleosin-like protein [Citrus sinensis] g	1.0	1.0	0.965	4e-72
399105973	137	14.3 kDa oleosin [Jatropha curcas]	0.944	0.992	0.808	4e-54
5381321	145	15 kDa oleosin [Sesamum indicum] gi|1982	0.972	0.965	0.791	2e-53
198250343	145	main allergen 15 kDa oleosin [Sesamum in	0.979	0.972	0.783	3e-53
148283923	153	oleosin L-isoform [Ficus pumila var. awk	0.868	0.816	0.832	4e-52
166831525	137	oleosin 3 [Jatropha curcas]	0.944	0.992	0.773	2e-51
29170509	140	oleosin [Corylus avellana]	0.958	0.985	0.815	3e-51
95925793	140	OleIII [Camellia oleifera]	0.847	0.871	0.836	5e-51
224053683	134	predicted protein [Populus trichocarpa]	0.881	0.947	0.779	2e-49
449458331	142	PREDICTED: oleosin 18.5 kDa-like [Cucumi	0.965	0.978	0.809	2e-49

>gi|683553|emb|CAA88360.1| oleosin-like protein [Citrus sinensis] gi|1582679|prf||2119230A oleosin homolog

 Score =  275 bits (703), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 139/144 (96%), Positives = 140/144 (97%)

Query: 1   MAEHYQPHEQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60
           MAEHYQP +QTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI
Sbjct: 1   MAEHYQPLQQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60

Query: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAS 120
           CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLA 
Sbjct: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAG 120

Query: 121 KAREMRDRAEQFGQQQSTGSQPGS 144
           KAREMRDRAEQFGQQQ TGSQ GS
Sbjct: 121 KAREMRDRAEQFGQQQITGSQQGS 144

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|399105973|gb|AFP19885.1| 14.3 kDa oleosin [Jatropha curcas]

 Score =  215 bits (548), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 114/141 (80%), Positives = 123/141 (87%), Gaps = 5/141 (3%)

Query: 1   MAEHYQPHEQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60
           MAEH     Q+Q   +QPRSHQVVKAATAVTAGGSLLVLSGLT+AGTVIALT+ATPLLVI
Sbjct: 1   MAEH----PQSQHVGQQPRSHQVVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVI 56

Query: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAS 120
            SPVLVPAVITV L+I GFLASGGFGVAAISVLSWIYRYVTG HPPGA+ L+QAR+KLA 
Sbjct: 57  FSPVLVPAVITVCLIITGFLASGGFGVAAISVLSWIYRYVTGKHPPGAESLDQARLKLAG 116

Query: 121 KAREMRDRAEQFGQQQSTGSQ 141
           KAREM+DRAEQFG Q  TG Q
Sbjct: 117 KAREMKDRAEQFG-QHVTGQQ 136

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|5381321|gb|AAD42942.1|AF091840_1 15 kDa oleosin [Sesamum indicum] gi|198250341|gb|ACH85187.1| main allergen 15 kDa oleosin [Sesamum indicum]

 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/144 (79%), Positives = 124/144 (86%), Gaps = 4/144 (2%)

Query: 1   MAEHYQPHEQTQ---LQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPL 57
           MAEHY   +QT+   LQ  QPR+ +VVKAATAVTAGGSLLVLSGLT+AGTVIALTIATPL
Sbjct: 1   MAEHYGQQQQTRAPHLQ-LQPRAQRVVKAATAVTAGGSLLVLSGLTLAGTVIALTIATPL 59

Query: 58  LVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMK 117
           LVI SPVLVPAVIT+ LL  GFLASGGFGVAA+SVLSWIYRY+TG HPPGADQLE A+ K
Sbjct: 60  LVIFSPVLVPAVITIFLLGAGFLASGGFGVAALSVLSWIYRYLTGKHPPGADQLESAKTK 119

Query: 118 LASKAREMRDRAEQFGQQQSTGSQ 141
           LASKAREM+DRAEQF QQ   GSQ
Sbjct: 120 LASKAREMKDRAEQFSQQPVAGSQ 143

Source: Sesamum indicum

Species: Sesamum indicum

Genus: Sesamum

Family: Pedaliaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|198250343|gb|ACH85188.1| main allergen 15 kDa oleosin [Sesamum indicum]

 Score =  213 bits (541), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 112/143 (78%), Positives = 122/143 (85%), Gaps = 2/143 (1%)

Query: 1   MAEHYQPHEQTQLQ--SRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLL 58
           MAEHY   +QT+      QPR+ +VVKAATAVTAGGSLLVLSGLT+AGTVIALTIATPLL
Sbjct: 1   MAEHYGQQQQTRAPHPQLQPRAQRVVKAATAVTAGGSLLVLSGLTLAGTVIALTIATPLL 60

Query: 59  VICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKL 118
           VI SPVLVPAVIT+ LL  GFLASGGFGVAA+SVLSWIYRY+TG HPPGADQLE A+ KL
Sbjct: 61  VIFSPVLVPAVITIFLLGAGFLASGGFGVAALSVLSWIYRYLTGKHPPGADQLESAKTKL 120

Query: 119 ASKAREMRDRAEQFGQQQSTGSQ 141
           ASKAREM+DRAEQF QQ   GSQ
Sbjct: 121 ASKAREMKDRAEQFSQQPVAGSQ 143

Source: Sesamum indicum

Species: Sesamum indicum

Genus: Sesamum

Family: Pedaliaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148283923|gb|ABQ57397.1| oleosin L-isoform [Ficus pumila var. awkeotsang]

 Score =  209 bits (531), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 104/125 (83%), Positives = 113/125 (90%)

Query: 17  QPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLI 76
            PRSHQVVKAATAVTAGGSLLVLS L +AGTVIALTIATPL VI SPVLVPAVIT+ L+I
Sbjct: 25  HPRSHQVVKAATAVTAGGSLLVLSALILAGTVIALTIATPLFVIFSPVLVPAVITLGLII 84

Query: 77  MGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQFGQQQ 136
           +GFLASGGFGVAA++VLSWIYRYVTG HPPGADQL+QAR KLASKAREM+D+AEQFGQQ 
Sbjct: 85  IGFLASGGFGVAALTVLSWIYRYVTGKHPPGADQLDQARHKLASKAREMKDKAEQFGQQH 144

Query: 137 STGSQ 141
            T  Q
Sbjct: 145 LTSGQ 149

Source: Ficus pumila var. awkeotsang

Species: Ficus pumila

Genus: Ficus

Family: Moraceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|166831525|gb|ABW90150.2| oleosin 3 [Jatropha curcas]

 Score =  206 bits (525), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 109/141 (77%), Positives = 119/141 (84%), Gaps = 5/141 (3%)

Query: 1   MAEHYQPHEQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60
           MAEH     Q+Q   +QPRSHQVVKAATAVTAGGSLLVLSGLT+AGTVIALT+ TPLLVI
Sbjct: 1   MAEH----PQSQHVGQQPRSHQVVKAATAVTAGGSLLVLSGLTLAGTVIALTVPTPLLVI 56

Query: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAS 120
            SPV+VP VITV L+I GFLASGGFGVAAI VL WIYRYVTG HPPGA+ L+QAR+KLA 
Sbjct: 57  FSPVMVPTVITVCLIITGFLASGGFGVAAIFVLFWIYRYVTGKHPPGAENLDQARLKLAG 116

Query: 121 KAREMRDRAEQFGQQQSTGSQ 141
           KAREM+DRAEQFG Q  TG Q
Sbjct: 117 KAREMKDRAEQFG-QHVTGQQ 136

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|29170509|gb|AAO65960.1| oleosin [Corylus avellana]

 Score =  206 bits (524), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/141 (81%), Positives = 124/141 (87%), Gaps = 3/141 (2%)

Query: 1   MAEHYQPHEQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60
           MAEH +   Q Q  + QPRSHQVVKAATA TAGGSLLV SGL +AGTVIALT+ATPL VI
Sbjct: 1   MAEHPR---QLQDPAHQPRSHQVVKAATAATAGGSLLVPSGLILAGTVIALTLATPLFVI 57

Query: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAS 120
            SPVLVPAVITVSL+IMGFLASGGFGVAA++VLSWIYRYVTG HPPGADQL+ ARMKLAS
Sbjct: 58  FSPVLVPAVITVSLIIMGFLASGGFGVAAVTVLSWIYRYVTGRHPPGADQLDHARMKLAS 117

Query: 121 KAREMRDRAEQFGQQQSTGSQ 141
           KAREM+DRAEQFGQQ  TGSQ
Sbjct: 118 KAREMKDRAEQFGQQHVTGSQ 138

Source: Corylus avellana

Species: Corylus avellana

Genus: Corylus

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|95925793|gb|ABF57563.1| OleIII [Camellia oleifera]

 Score =  205 bits (521), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 102/122 (83%), Positives = 111/122 (90%)

Query: 20  SHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGF 79
           +H +VKAATA+TAGGSLLVLSGLT+AGTVIAL +ATPLLVI SPVLVPA +TV LL MGF
Sbjct: 17  AHYMVKAATAITAGGSLLVLSGLTLAGTVIALALATPLLVIFSPVLVPAAVTVCLLNMGF 76

Query: 80  LASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQFGQQQSTG 139
           LASGGFGVA ISVLSWIYRYVTG HPPGADQL+QAR KLASKAREM+DRAEQFGQQ  +G
Sbjct: 77  LASGGFGVAGISVLSWIYRYVTGKHPPGADQLDQARTKLASKAREMKDRAEQFGQQHISG 136

Query: 140 SQ 141
           SQ
Sbjct: 137 SQ 138

Source: Camellia oleifera

Species: Camellia oleifera

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053683|ref|XP_002297927.1| predicted protein [Populus trichocarpa] gi|222845185|gb|EEE82732.1| predicted protein [Populus trichocarpa]

 Score =  200 bits (508), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 99/127 (77%), Positives = 112/127 (88%)

Query: 9   EQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPA 68
           +Q+Q   +QPRS Q+VKA TAVTAGGSLLVLSGLT+A TVI LTIATPLLVI SPV+VPA
Sbjct: 5   QQSQQPGKQPRSQQIVKATTAVTAGGSLLVLSGLTLAATVILLTIATPLLVIFSPVIVPA 64

Query: 69  VITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDR 128
           V+ VSLL+MGFLASGGFGVA I+ +SWIY YVTG HPPG+DQLEQAR+KLA KAREM+DR
Sbjct: 65  VMAVSLLLMGFLASGGFGVAGITAMSWIYGYVTGRHPPGSDQLEQARIKLAVKAREMKDR 124

Query: 129 AEQFGQQ 135
           AEQFG Q
Sbjct: 125 AEQFGHQ 131

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449458331|ref|XP_004146901.1| PREDICTED: oleosin 18.5 kDa-like [Cucumis sativus] gi|449530570|ref|XP_004172267.1| PREDICTED: oleosin 18.5 kDa-like [Cucumis sativus]

 Score =  200 bits (508), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/142 (80%), Positives = 125/142 (88%), Gaps = 3/142 (2%)

Query: 1   MAEHYQPHEQTQLQ-SRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLV 59
           MAEH QP++Q+  Q   QPR +QVVKAATA TAGGSLLVLSGL +AGTVIALTIATPLLV
Sbjct: 1   MAEH-QPYQQSHQQPGSQPR-YQVVKAATAATAGGSLLVLSGLILAGTVIALTIATPLLV 58

Query: 60  ICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLA 119
           I SPVLVPAVITVSLLIMGFLASGGFGVA I+V SWIYRYVTG HPPGADQL+ AR KLA
Sbjct: 59  IFSPVLVPAVITVSLLIMGFLASGGFGVAGITVFSWIYRYVTGKHPPGADQLDLARHKLA 118

Query: 120 SKAREMRDRAEQFGQQQSTGSQ 141
           SKAREM+DRAEQFGQQ ++G Q
Sbjct: 119 SKAREMKDRAEQFGQQHTSGPQ 140

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
TAIR|locus:2117328	173	OLEO1 "AT4G25140" [Arabidopsis	0.847	0.705	0.608	1.5e-35
TAIR|locus:2176212	141	OLEO3 "AT5G51210" [Arabidopsis	0.833	0.851	0.552	9.8e-32
TAIR|locus:2043470	149	AT2G25890 "AT2G25890" [Arabido	0.868	0.838	0.553	1.3e-31
TAIR|locus:2089189	191	OLEO4 "AT3G27660" [Arabidopsis	0.736	0.554	0.405	1.7e-18
TAIR|locus:2084223	183	AT3G01570 "AT3G01570" [Arabido	0.770	0.606	0.408	2.8e-18
TAIR|locus:2170558	199	OLEO2 "AT5G40420" [Arabidopsis	0.597	0.432	0.476	1.6e-17
TAIR|locus:2151606	294	AT5G61610 [Arabidopsis thalian	0.555	0.272	0.460	3.7e-16
TAIR|locus:2086879	166	AT3G18570 "AT3G18570" [Arabido	0.791	0.686	0.338	1.6e-15
TAIR|locus:2183414	106	GRP19 "glycine-rich protein 19	0.5	0.679	0.527	1.6e-15
TAIR|locus:2028471	169	AT1G48990 "AT1G48990" [Arabido	0.784	0.668	0.355	6.9e-15

TAIR|locus:2117328 OLEO1 "AT4G25140" [Arabidopsis thaliana (taxid:3702)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 76/125 (60%), Positives = 96/125 (76%)

Query:     9 EQTQLQSR---QPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVL 65
             +Q Q+  R     +S Q          GGSLLVLS LT+ GTVIALT+ATPLLVI SP+L
Sbjct:    26 DQYQMSGRGSDYSKSRQIAKAATAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPIL 85

Query:    66 VPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREM 125
             VPA+ITV+LLI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL SKA+++
Sbjct:    86 VPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDL 145

Query:   126 RDRAE 130
             +DRA+
Sbjct:   146 KDRAQ 150

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0019915 "lipid storage" evidence=ISS;RCA;IMP

GO:0010344 "seed oilbody biogenesis" evidence=IGI;IMP

GO:0009845 "seed germination" evidence=IGI;RCA

GO:0050826 "response to freezing" evidence=RCA;IMP

GO:0006406 "mRNA export from nucleus" evidence=RCA

GO:0006606 "protein import into nucleus" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

TAIR|locus:2176212 OLEO3 "AT5G51210" [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 68/123 (55%), Positives = 91/123 (73%)

Query:     4 HYQPHEQTQLQSRQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSP 63
             H++   +   Q   P++ Q          GGSLLVLSGLT+AGTVIALT+ATPLLVI SP
Sbjct:     8 HHEMISRDSTQEAHPKARQMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSP 67

Query:    64 VLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAR 123
             VLVPAV+TV+L+I GFLASGGFG+AAI+  SW+YR++TG    G+D++E ARMK+ S+ +
Sbjct:    68 VLVPAVVTVALIITGFLASGGFGIAAITAFSWLYRHMTGS---GSDKIENARMKVGSRVQ 124

Query:   124 EMR 126
             + +
Sbjct:   125 DTK 127

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

TAIR|locus:2043470 AT2G25890 "AT2G25890" [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 72/130 (55%), Positives = 90/130 (69%)

Query:     1 MAEHYQPHEQTQ-----LQSRQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIAT 55
             MA+H Q  +Q Q     L    P + Q          G SLLVLSGLT+ GTVI L +AT
Sbjct:     1 MADHQQHQQQQQPIMRSLHESSPSTRQIVRFVTAATIGLSLLVLSGLTLTGTVIGLIVAT 60

Query:    56 PLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQAR 115
             PL+V+ SPVLVPAVIT+ LL MGFL SGG GVAA + L+WIY+YVTG HP GAD+++ AR
Sbjct:    61 PLMVLFSPVLVPAVITIGLLTMGFLFSGGCGVAAATALTWIYKYVTGKHPMGADKVDYAR 120

Query:   116 MKLASKAREM 125
             M++A KA+E+
Sbjct:   121 MRIAEKAKEL 130

GO:0003674 "molecular_function" evidence=ND

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2089189 OLEO4 "AT3G27660" [Arabidopsis thaliana (taxid:3702)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 43/106 (40%), Positives = 68/106 (64%)

Query:    14 QSRQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVS 73
             +SR P ++Q          GG+LL L+GLT+AG+VI L ++ PL ++ SPV+VPA +T+ 
Sbjct:    43 KSRGPSTNQILALIAGVPIGGTLLTLAGLTLAGSVIGLLVSIPLFLLFSPVIVPAALTIG 102

Query:    74 LLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLA 119
             L + G LASG FG+  +S +SW+  Y+ G      +QL+ A+ ++A
Sbjct:   103 LAVTGILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMA 148

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS;RCA

GO:0009845 "seed germination" evidence=IGI;RCA

GO:0010344 "seed oilbody biogenesis" evidence=IGI

GO:0050826 "response to freezing" evidence=RCA;IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

TAIR|locus:2084223 AT3G01570 "AT3G01570" [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 47/115 (40%), Positives = 69/115 (60%)

Query:    18 PRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIM 77
             P S Q          GG+LL ++GLT+AG+VI L +A PL +I SPV+VPA   + L + 
Sbjct:    32 PSSTQVLAVFVGVPIGGTLLTIAGLTLAGSVIGLMLAFPLFLIFSPVIVPAAFVIGLAMT 91

Query:    78 GFLASGGFGVAAISVLSWIYRYV--TGGHPPGADQLEQARMKLASKAREMRDRAE 130
             GFLASG  G+  +S +SW+  Y+   G H P  ++LE+A+ +LA  A  +  R +
Sbjct:    92 GFLASGAIGLTGLSSMSWVLNYIRRAGQHIP--EELEEAKHRLADMAEYVGQRTK 144

GO:0003674 "molecular_function" evidence=ND

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS;RCA

GO:0009845 "seed germination" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TAIR|locus:2170558 OLEO2 "AT5G40420" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 41/86 (47%), Positives = 60/86 (69%)

Query:    34 GSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVL 93
             GSLL L+GL +AG+VI L +A PL ++ SPV+VPA +T+ L + GFLASG FG+  +S +
Sbjct:    65 GSLLALAGLLLAGSVIGLMVALPLFLLFSPVIVPAALTIGLAMTGFLASGMFGLTGLSSI 124

Query:    94 SWIYRYVTGGHPPGADQLEQARMKLA 119
             SW+  Y+ G      +QLE A+ ++A
Sbjct:   125 SWVMNYLRGTRRTVPEQLEYAKRRMA 150

GO:0003674 "molecular_function" evidence=ND

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA;IDA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS;RCA;IMP

GO:0010344 "seed oilbody biogenesis" evidence=IGI;IMP

GO:0009845 "seed germination" evidence=IGI;RCA

GO:0050826 "response to freezing" evidence=RCA;IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

TAIR|locus:2151606 AT5G61610 [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 41/89 (46%), Positives = 58/89 (65%)

Query:    35 SLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLS 94
             S ++L+GLT AGT +ALT+  P+LV+ SP+LVPAVIT S L  GFLASG  G   I++L 
Sbjct:    20 SFMILTGLTFAGTAVALTVMIPVLVVLSPILVPAVITSSFLATGFLASGSLGALGIALLI 79

Query:    95 WIYR---------YVTGGHPPGADQLEQA 114
             W+Y+         +  GG P G ++L ++
Sbjct:    80 WLYKKEEYSRATLHARGGRPDGPNKLAES 108

GO:0005576 "extracellular region" evidence=ISM

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

TAIR|locus:2086879 AT3G18570 "AT3G18570" [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 40/118 (33%), Positives = 63/118 (53%)

Query:    12 QLQSRQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVIT 71
             QL+S  P S Q           G LL L G+++   V+   +  PL++I SP+ +P  + 
Sbjct:    35 QLRSHSPTSSQLFGFLALFISTGILLFLLGVSVTAAVLGFIVFLPLIIISSPIWIPVFVV 94

Query:    72 VSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRA 129
             V     GFL   GF V  ++++SW YRY  G HP G++Q++ AR ++   A  ++D A
Sbjct:    95 VG----GFLTVSGFLVGTVALVSWTYRYFRGMHPVGSNQMDYARSRIYDTASHVKDYA 148

GO:0003674 "molecular_function" evidence=ND

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

TAIR|locus:2183414 GRP19 "glycine-rich protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query:    35 SLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLS 94
             +LL  +G+T+ G+V+A  I+TPL VI SPVLVPA I  +LL  GF ASG FG  A ++LS
Sbjct:    16 ALLTFAGITLGGSVVACIISTPLFVIFSPVLVPATIATTLLASGFTASGSFGATAFTILS 75

Query:    95 WIYRYVTGGHPP 106
             W+Y+  TG   P
Sbjct:    76 WLYKKRTGRDLP 87

GO:0009507 "chloroplast" evidence=ISM

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

GO:0005576 "extracellular region" evidence=IDA

GO:0008289 "lipid binding" evidence=ISS

GO:0019953 "sexual reproduction" evidence=RCA;IMP

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2028471 AT1G48990 "AT1G48990" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 42/118 (35%), Positives = 67/118 (56%)

Query:    13 LQSRQPR-SHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVIT 71
             LQS+ P  S Q          GG LL+L+G+T+   V+      PL++I SP+ +P    
Sbjct:    41 LQSQSPNHSGQLFGFLAFFISGGILLLLTGITVTAFVLGFIAFLPLIIISSPIWIP---- 96

Query:    72 VSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRA 129
             + L++ GFL+  G  +A  +V+SW+YRY  G HP  +DQ++ AR ++   A  ++D A
Sbjct:    97 LFLIVTGFLSLAGLILATGAVVSWLYRYFKGMHPLRSDQVDYARSRIHDTAAHVKDYA 154

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q42980	OLEO1_ORYSJ	No assigned EC number	0.6101	0.8194	0.7972	yes	no
Q43804	OLEO1_PRUDU	No assigned EC number	0.7555	0.9236	0.8986	N/A	no
P29525	OLEO1_ARATH	No assigned EC number	0.6285	0.9513	0.7919	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_I8235 hypothetical protein (134 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	144
pfam01277	118	pfam01277, Oleosin, Oleosin	5e-43

>gnl|CDD|110290 pfam01277, Oleosin, Oleosin

 Score =  137 bits (347), Expect = 5e-43
 Identities = 63/118 (53%), Positives = 79/118 (66%), Gaps = 7/118 (5%)

Query: 19  RSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMG 78
            + QV+   TA+ AGGSLLVL+GLT+AGTVI L +ATPL VI SPVLVPA I + L + G
Sbjct: 1   STSQVLAVVTALPAGGSLLVLAGLTLAGTVIGLAVATPLFVIFSPVLVPAAIAIGLAVTG 60

Query: 79  FLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLA-------SKAREMRDRA 129
           FLASG FG+  +S LSW+ +YV G HPP  DQL+ A+ +L         K +EM  R 
Sbjct: 61  FLASGAFGLTGLSSLSWLLKYVRGKHPPVPDQLDYAKRRLQEAAEYAGQKTKEMGQRI 118

Length = 118

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	144
PF01277	118	Oleosin: Oleosin; InterPro: IPR000136 Oleosins []	100.0
PF01277	118	Oleosin: Oleosin; InterPro: IPR000136 Oleosins []	94.14
PF11990	121	DUF3487: Protein of unknown function (DUF3487); In	93.6
PF08006	181	DUF1700: Protein of unknown function (DUF1700); In	92.28
PF04156	191	IncA: IncA protein; InterPro: IPR007285 Chlamydia	90.52
PRK09459	76	pspG phage shock protein G; Reviewed	88.34
PF07332	121	DUF1469: Protein of unknown function (DUF1469); In	85.29
PF07178	95	TraL: TraL protein; InterPro: IPR009838 This entry	84.82
PRK10801	227	colicin uptake protein TolQ; Provisional	84.44
COG0811	216	TolQ Biopolymer transport proteins [Intracellular	81.49
TIGR02797	211	exbB tonB-system energizer ExbB. This model descri	80.57

>PF01277 Oleosin: Oleosin; InterPro: IPR000136 Oleosins [] are the proteinaceous components of plants' lipid storage bodies called oil bodies

Probab=100.00  E-value=1.3e-52  Score=317.42  Aligned_cols=117  Identities=53%  Similarity=0.923  Sum_probs=115.6

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhchhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 041282           19 RSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYR   98 (144)
Q Consensus        19 ss~qvl~~~~~~~~g~~LL~LaGlTL~gtvigL~vaTPLfvifSPVLVPAai~~~L~~~Gfl~sg~~Gltals~lsW~y~   98 (144)
                      |++|+++++++++++++||+|+|+||+||++||+++||||+||||||||++|+++|+++||+++|+||++++++++|+||
T Consensus         1 s~~qvl~~~~~~~~gg~LL~LaGlTL~gtvigL~vatPLfvifSPVlVPaai~~~l~~~Gfl~sg~~g~~~ls~lsW~~~   80 (118)
T PF01277_consen    1 STSQVLAVVTLLPAGGTLLVLAGLTLAGTVIGLAVATPLFVIFSPVLVPAAIAIGLAVAGFLTSGAFGLTALSSLSWMYN   80 (118)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhchh
Q 041282           99 YVTGGHPPGADQLEQARMKLASKAREMRDRAEQFGQQ  135 (144)
Q Consensus        99 y~~g~~p~g~~~ld~Ar~ri~d~A~~v~~kake~G~q  135 (144)
                      |+||+||+++||+||||+|++|+|+|++||+|||||+
T Consensus        81 y~rg~~~~~~~q~d~Ak~ri~d~a~~v~~kake~gq~  117 (118)
T PF01277_consen   81 YFRGRHPPGPDQLDYAKRRIADTASYVGQKAKEVGQK  117 (118)
T ss_pred             HhccCCCCCCccHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999975

Oil bodies are small droplets (0.2 to 1.5 mu-m in diameter) containing mostly triacylglycerol that are surrounded by a phospholipid/ oleosin annulus. Oleosins may have a structural role in stabilising the lipid body during dessication of the seed, by preventing coalescence of the oil. They may also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth. Oleosins are found in the monolayer lipid/ water interface of oil bodies and probably interact with both the lipid and phospholipid moieties. Oleosins are proteins of 16 Kd to 24 Kd and are composed of three domains: an N-terminal hydrophilic region of variable length (from 30 to 60 residues); a central hydrophobic domain of about 70 residues and a C-terminal amphipathic region of variable length (from 60 to 100 residues). The central hydrophobic domain is proposed to be made up of beta-strand structure and to interact with the lipids []. It is the only domain whose sequence is conserved.; GO: 0012511 monolayer-surrounded lipid storage body, 0016021 integral to membrane

>PF01277 Oleosin: Oleosin; InterPro: IPR000136 Oleosins [] are the proteinaceous components of plants' lipid storage bodies called oil bodies

Probab=94.14  E-value=2  Score=33.01  Aligned_cols=98  Identities=20%  Similarity=0.265  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhHHhhchhhh---HHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHhcCCCCCCC
Q 041282           35 SLLVLSGLTMAGTVIALTIATPLLVICSPVLV---PAVITVSLLIMGFLASGG--FGVAAISVLSWIYRYVTGGHPPGAD  109 (144)
Q Consensus        35 ~LL~LaGlTL~gtvigL~vaTPLfvifSPVLV---PAai~~~L~~~Gfl~sg~--~Gltals~lsW~y~y~~g~~p~g~~  109 (144)
                      +++...|..|.=+-+-|+-+.=-+++.+|++|   |.-+-+++++ ++...|.  .|.-+++.++|+-.-.+=-+-..+.
T Consensus        10 ~~~~~gg~LL~LaGlTL~gtvigL~vatPLfvifSPVlVPaai~~-~l~~~Gfl~sg~~g~~~ls~lsW~~~y~rg~~~~   88 (118)
T PF01277_consen   10 TLLPAGGTLLVLAGLTLAGTVIGLAVATPLFVIFSPVLVPAAIAI-GLAVAGFLTSGAFGLTALSSLSWMYNYFRGRHPP   88 (118)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCCC
Confidence            33444444444333444433344788888776   5444444333 4444442  3455677888888887766655555


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhchhcc
Q 041282          110 QLEQARMKLASKAREMRDRAEQFGQQQS  137 (144)
Q Consensus       110 ~ld~Ar~ri~d~A~~v~~kake~G~q~~  137 (144)
                      ..|    |+...-+.+.|++++.+|+..
T Consensus        89 ~~~----q~d~Ak~ri~d~a~~v~~kak  112 (118)
T PF01277_consen   89 GPD----QLDYAKRRIADTASYVGQKAK  112 (118)
T ss_pred             CCc----cHHHHHHHHHHHHHHHHHHHH
Confidence            543    445555667777777777654

Oil bodies are small droplets (0.2 to 1.5 mu-m in diameter) containing mostly triacylglycerol that are surrounded by a phospholipid/ oleosin annulus. Oleosins may have a structural role in stabilising the lipid body during dessication of the seed, by preventing coalescence of the oil. They may also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth. Oleosins are found in the monolayer lipid/ water interface of oil bodies and probably interact with both the lipid and phospholipid moieties. Oleosins are proteins of 16 Kd to 24 Kd and are composed of three domains: an N-terminal hydrophilic region of variable length (from 30 to 60 residues); a central hydrophobic domain of about 70 residues and a C-terminal amphipathic region of variable length (from 60 to 100 residues). The central hydrophobic domain is proposed to be made up of beta-strand structure and to interact with the lipids []. It is the only domain whose sequence is conserved.; GO: 0012511 monolayer-surrounded lipid storage body, 0016021 integral to membrane

>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised

Probab=93.60  E-value=0.35  Score=36.91  Aligned_cols=49  Identities=18%  Similarity=0.262  Sum_probs=34.5

Q ss_pred             HHHHHHHHHHHhhhHHhhchh-hhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcC
Q 041282           44 MAGTVIALTIATPLLVICSPV-LVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGG  103 (144)
Q Consensus        44 L~gtvigL~vaTPLfvifSPV-LVPAai~~~L~~~Gfl~sg~~Gltals~lsW~y~y~~g~  103 (144)
                      ..++++|+.++.|+.+++.++ .+|..+.++.+..-|+.           -.|+-|+-|||
T Consensus        31 ~~~~~~g~~~gl~la~~~g~~a~~pt~~ll~~~~~v~~g-----------g~~l~rlKRGK   80 (121)
T PF11990_consen   31 GVGFVAGLVVGLPLALLTGWWAMIPTGALLGPILGVFVG-----------GKLLARLKRGK   80 (121)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------HHHHHHHHcCC
Confidence            357788889999998999988 67877666665544433           25677776664

This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.

>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT)

Probab=92.28  E-value=4.4  Score=31.49  Aligned_cols=24  Identities=29%  Similarity=0.343  Sum_probs=10.9

Q ss_pred             HHHHHHHHHHHHHhhhHHhhchhhh
Q 041282           42 LTMAGTVIALTIATPLLVICSPVLV   66 (144)
Q Consensus        42 lTL~gtvigL~vaTPLfvifSPVLV   66 (144)
                      +.+...++++.++.. .++++|++.
T Consensus       101 ~~~~~~~~~~~i~~~-~~i~~~~~l  124 (181)
T PF08006_consen  101 IVLILLVLALIIAVI-AFILSGIIL  124 (181)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            334444555555444 334555444

>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion

Probab=90.52  E-value=3.6  Score=31.86  Aligned_cols=15  Identities=27%  Similarity=0.193  Sum_probs=7.2

Q ss_pred             hHHhhchhhhHHHHH
Q 041282           57 LLVICSPVLVPAVIT   71 (144)
Q Consensus        57 LfvifSPVLVPAai~   71 (144)
                      +-.++|+++..+.++
T Consensus        33 l~~~~s~~lg~~~lA   47 (191)
T PF04156_consen   33 LGALISFILGIALLA   47 (191)
T ss_pred             hHHHHHHHHHHHHHH
Confidence            445555555444443

The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].

>PRK09459 pspG phage shock protein G; Reviewed

Probab=88.34  E-value=2.9  Score=30.20  Aligned_cols=26  Identities=27%  Similarity=0.644  Sum_probs=20.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhHHh
Q 041282           35 SLLVLSGLTMAGTVIALTIATPLLVI   60 (144)
Q Consensus        35 ~LL~LaGlTL~gtvigL~vaTPLfvi   60 (144)
                      ..|+++|+|+.|...++.+++-+..+
T Consensus        12 ~~LlvTGiSllgv~aAl~va~~vM~l   37 (76)
T PRK09459         12 VMLLVTGISLLGIIAALGVATLVMFL   37 (76)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence            45788999999999999887765544

>PF07332 DUF1469: Protein of unknown function (DUF1469); InterPro: IPR009937 This entry represents proteins found in hypothetical bacterial proteins where is is annotated as ycf49 or ycf49-like

Probab=85.29  E-value=12  Score=27.01  Aligned_cols=35  Identities=17%  Similarity=0.208  Sum_probs=17.4

Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHHH
Q 041282           87 VAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREM  125 (144)
Q Consensus        87 ltals~lsW~y~y~~g~~p~g~~~ld~Ar~ri~d~A~~v  125 (144)
                      +.++-.+.|..|.++++.|    .++.-++.+.+..+-+
T Consensus        84 ~la~i~~~~~~~~l~~~~~----~~~~t~~~l~~d~~~l  118 (121)
T PF07332_consen   84 LLALILLLIGRRRLRRAPP----PFEETIAELKEDIAAL  118 (121)
T ss_pred             HHHHHHHHHHHHHHhcCCC----CHHHHHHHHHHHHHHh
Confidence            4444556677777775332    2344444444443333

The function is not known.

>PF07178 TraL: TraL protein; InterPro: IPR009838 This entry represents bacterial TraL proteins

Probab=84.82  E-value=3.6  Score=29.49  Aligned_cols=36  Identities=31%  Similarity=0.506  Sum_probs=24.6

Q ss_pred             HHHHHHHHHHhh-HHHHHHHHHHHHHHHHHhcCCCCC
Q 041282           72 VSLLIMGFLASG-GFGVAAISVLSWIYRYVTGGHPPG  107 (144)
Q Consensus        72 ~~L~~~Gfl~sg-~~Gltals~lsW~y~y~~g~~p~g  107 (144)
                      +.+.+.|++.+. ..|+..-..+.|.||+++.++|.|
T Consensus        27 ~~~~~~gi~~~~~~~g~i~g~~~~~~~~k~K~~~~~g   63 (95)
T PF07178_consen   27 LILFVIGILSGHFLIGLILGIVLWWGYRKFKKGRGRG   63 (95)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHccCCcc
Confidence            334444566555 456666677899999999888754

TraL is a predicted peripheral membrane protein involved in bacterial sex pilus assembly []. TraL is part of the type IV secretion system for conjugative plasmid transfer []. The exact function of TraL is unknown.; GO: 0000746 conjugation, 0019867 outer membrane

>PRK10801 colicin uptake protein TolQ; Provisional

Probab=84.44  E-value=12  Score=30.91  Aligned_cols=73  Identities=16%  Similarity=0.158  Sum_probs=44.0

Q ss_pred             HHHHHHHHHHHhhhHHhh---chhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Q 041282           44 MAGTVIALTIATPLLVIC---SPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAS  120 (144)
Q Consensus        44 L~gtvigL~vaTPLfvif---SPVLVPAai~~~L~~~Gfl~sg~~Gltals~lsW~y~y~~g~~p~g~~~ld~Ar~ri~d  120 (144)
                      |.|||+|++-+.--+=.-   +|-.+-.+|..+|.++.      +|+..-=.-...|||+..       ++|.-..+|.+
T Consensus       139 LlGTV~Gmi~aF~~i~~~g~~~~~~~a~GI~~ALitTa------~GL~vAIPAli~yN~f~~-------ri~~i~~~le~  205 (227)
T PRK10801        139 LFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATA------IGLFAAIPAVMAYNRLNQ-------RVNKLELNYDN  205 (227)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHH
Confidence            578999988754322111   35555555555555543      355444455578999964       46666677777


Q ss_pred             HHHHHHHHH
Q 041282          121 KAREMRDRA  129 (144)
Q Consensus       121 ~A~~v~~ka  129 (144)
                      .+.++-+.-
T Consensus       206 ~a~~ll~~l  214 (227)
T PRK10801        206 FMEEFTAIL  214 (227)
T ss_pred             HHHHHHHHH
Confidence            777666654

>COG0811 TolQ Biopolymer transport proteins [Intracellular trafficking and secretion]

Probab=81.49  E-value=23  Score=28.78  Aligned_cols=72  Identities=18%  Similarity=0.107  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHhhhHHhhc--hhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Q 041282           44 MAGTVIALTIATPLLVICS--PVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASK  121 (144)
Q Consensus        44 L~gtvigL~vaTPLfvifS--PVLVPAai~~~L~~~Gfl~sg~~Gltals~lsW~y~y~~g~~p~g~~~ld~Ar~ri~d~  121 (144)
                      |.|||+|+.-+   |.=.+  ==-=|++++-++..+=+  +-+.|+.+--.-...|||++++       .+.-..++.+.
T Consensus       134 L~GTV~GIm~a---F~~i~~~~~~~~a~vA~GIseAL~--aTA~GL~vAIPAvi~yn~l~r~-------~~~~~~~~e~~  201 (216)
T COG0811         134 LLGTVWGIMPA---FIGIGAGGGADLAVVAPGISEALI--ATAIGLFVAIPAVVAYNVLRRK-------VEELLAKLEDF  201 (216)
T ss_pred             HHHHHHHHHHH---HHHHhccCCCCHHHHHhhHHHHHH--HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHH
Confidence            56888887654   33333  00123444444433222  2244666666677899999763       55556677777


Q ss_pred             HHHHHH
Q 041282          122 AREMRD  127 (144)
Q Consensus       122 A~~v~~  127 (144)
                      ++++-+
T Consensus       202 ~~~l~~  207 (216)
T COG0811         202 AEELEL  207 (216)
T ss_pred             HHHHHH
Confidence            766655

>TIGR02797 exbB tonB-system energizer ExbB

Probab=80.57  E-value=16  Score=29.56  Aligned_cols=70  Identities=20%  Similarity=0.184  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHHhhhHHhh---chhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Q 041282           44 MAGTVIALTIATPLLVIC---SPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAS  120 (144)
Q Consensus        44 L~gtvigL~vaTPLfvif---SPVLVPAai~~~L~~~Gfl~sg~~Gltals~lsW~y~y~~g~~p~g~~~ld~Ar~ri~d  120 (144)
                      |.|||+|++-+.=-+=--   +|-.|-.+|.-+|.++.      +|+..-=.-...|||++.       +.|.-.++|.+
T Consensus       134 LLGTV~Gmi~aF~~ia~~g~~~~~~lA~GI~eALitTA------~GL~VAIPAli~yn~f~~-------ri~~~~~~le~  200 (211)
T TIGR02797       134 LFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATA------IGLVAAIPAVVIYNVFAR-------SIAGYRALLAD  200 (211)
T ss_pred             HHHHHHHHHHHHHHHhhCCCCCHHHHhHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHH
Confidence            568999988754322110   34444444444444433      355444445578999974       46777777777


Q ss_pred             HHHHHH
Q 041282          121 KAREMR  126 (144)
Q Consensus       121 ~A~~v~  126 (144)
                      .+.++-
T Consensus       201 ~~~e~~  206 (211)
T TIGR02797       201 ASAGVE  206 (211)
T ss_pred             HHHHHH
Confidence            776654

This model describes ExbB proteins, part of the MotA/TolQ/ExbB protein family. The paired proteins MotA and MotB, TolQ and TolR, and ExbB and ExbD harness the proton-motive force to drive the flagellar motor, energize the Tol-Pal system, or energize TonB, respectively. Tol-Pal and TonB are both active at the outer membrane. Genomes may have many different TonB-dependent receptors, of which many of those characterized are involved in siderophore transport across the outer membrane.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00