Citrus Sinensis ID: 041339

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200---
MSERVDHIWKTKKVKQAVALLILRQCLLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATNSEKTAIPNLTIRGYDIIDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQSVSISIPGPSASIPQTMAVFANKGLNLTDMVLLMGI
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccHHcHHHHcccccccccccHHHHHHHHHHccccccccHHcccc
cccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccEcccEcccccHHHHcHHcccccccHHHHHHHHHcccccHHHHHHHHHc
MSERVDHIWKTKKVKQAVALLILRQCLLANIAGLSHGALQVgfyrgkcgiadVEMIVAGVVTARFIRDPTVVAALIRLQFHdcfvngcdaSILIDatnsektaipnltirgydiIDEAKAAVEGFCPGVVSCADLIAIAARDAvflggggryevqtgrrDGLVSLAQSVsisipgpsasipQTMAVFANKGLNLTDMVLLMGI
mservdhiwktkkVKQAVALLILRQCLLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIdatnsektaipnLTIRGYDIIDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQSVSIsipgpsasiPQTMAVFANKGLNLTDMVLLMGI
MSERVDHIWKTKKVKQAVALLILRQCLLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATNSEKTAIPNLTIRGYDIIDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQsvsisipgpsasipQTMAVFANKGLNLTDMVLLMGI
*****DHIWKTKKVKQAVALLILRQCLLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATNSEKTAIPNLTIRGYDIIDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQSVSISI******IPQTMAVFANKGLNLTDMVLL***
***************QAVALLILRQCLLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATNSEKTAIPNLTIRGYDIIDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQSVSISIPGPSASIPQTMAVFANKGLNLTDMVLLMGI
*********KTKKVKQAVALLILRQCLLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATNSEKTAIPNLTIRGYDIIDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQSVSISIPGPSASIPQTMAVFANKGLNLTDMVLLMGI
**ERVDHIWKTKKVKQAVALLILRQCLLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATNSEKTAIPNLTIRGYDIIDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQSVSISIPGPSASIPQTMAVFANKGLNLTDMVLLMGI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSERVDHIWKTKKVKQAVALLILRQCLLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATNSEKTAIPNLTIRGYDIIDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQSVSISIPGPSASIPQTMAVFANKGLNLTDMVLLMGI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query203 2.2.26 [Sep-21-2011]
Q9FMR0 331 Peroxidase 60 OS=Arabidop yes no 0.891 0.546 0.5 1e-44
Q43729 313 Peroxidase 57 OS=Arabidop no no 0.827 0.536 0.505 8e-44
Q9SS67 321 Peroxidase 28 OS=Arabidop no no 0.857 0.542 0.480 3e-43
O23044 326 Peroxidase 3 OS=Arabidops no no 0.857 0.533 0.477 5e-42
Q93V93 310 Peroxidase 44 OS=Arabidop no no 0.886 0.580 0.473 1e-41
P22196 330 Cationic peroxidase 2 OS= N/A no 0.807 0.496 0.529 4e-41
A7QEU4 329 Peroxidase 5 OS=Vitis vin no no 0.798 0.492 0.505 9e-41
Q43387 328 Peroxidase 71 OS=Arabidop no no 0.916 0.567 0.435 2e-39
Q9SUT2 326 Peroxidase 39 OS=Arabidop no no 0.891 0.555 0.449 3e-39
O23474 348 Peroxidase 40 OS=Arabidop no no 0.798 0.465 0.458 5e-39
>sp|Q9FMR0|PER60_ARATH Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1 Back     alignment and function desciption
 Score =  179 bits (454), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/188 (50%), Positives = 128/188 (68%), Gaps = 7/188 (3%)

Query: 17  AVALLILRQCLLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALI 76
            + +LIL   LL+   G  +G L++GFY   C   +VE IV+ VV   FI+D ++  A+I
Sbjct: 7   TIEVLILSLALLSFGHGC-YGQLRLGFYSQNC--QNVENIVSKVVGEAFIKDSSIAPAMI 63

Query: 77  RLQFHDCFVNGCDASILIDATNSEKTAIPNLTIRGYDIIDEAKAAVEGFCPGVVSCADLI 136
           RL FHDCF NGCDAS+L+D +NSEK A PNL++RGY++ID+ K+AVE  C  VVSCAD+I
Sbjct: 64  RLYFHDCFSNGCDASLLLDGSNSEKKASPNLSVRGYEVIDDIKSAVEKECDRVVSCADII 123

Query: 137 AIAARDAVFLGGGG--RYEVQTGRRDGLVSLAQSVSISIPGPSASIPQTMAVFANKGLNL 194
           A+A RD V L  GG  RYE+ TGR DG +S A  + + +P P  ++ +T A F  + L+L
Sbjct: 124 ALATRDLVTLASGGKTRYEIPTGRLDGKISSA--LLVDLPSPKMTVAETAAKFDQRKLSL 181

Query: 195 TDMVLLMG 202
            DMVLL+G
Sbjct: 182 NDMVLLLG 189
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q43729|PER57_ARATH Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1 Back     alignment and function description
>sp|Q9SS67|PER28_ARATH Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1 Back     alignment and function description
>sp|O23044|PER3_ARATH Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=2 SV=1 Back     alignment and function description
>sp|Q93V93|PER44_ARATH Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1 Back     alignment and function description
>sp|P22196|PER2_ARAHY Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1 Back     alignment and function description
>sp|A7QEU4|PER5_VITVI Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=2 Back     alignment and function description
>sp|Q43387|PER71_ARATH Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1 Back     alignment and function description
>sp|Q9SUT2|PER39_ARATH Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1 Back     alignment and function description
>sp|O23474|PER40_ARATH Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query203
224134258 324 predicted protein [Populus trichocarpa] 0.921 0.577 0.694 4e-71
255539977 328 Peroxidase 60 precursor, putative [Ricin 0.842 0.521 0.739 4e-68
296084891 362 unnamed protein product [Vitis vinifera] 0.837 0.469 0.595 4e-54
359479498 333 PREDICTED: peroxidase 60-like [Vitis vin 0.837 0.510 0.595 5e-54
449443638 326 PREDICTED: peroxidase 60-like [Cucumis s 0.852 0.530 0.590 1e-53
147781966 333 hypothetical protein VITISV_005678 [Viti 0.807 0.492 0.598 9e-53
224054470 326 predicted protein [Populus trichocarpa] 0.837 0.521 0.576 2e-48
125563233 328 hypothetical protein OsI_30884 [Oryza sa 0.906 0.560 0.510 1e-45
99646711 326 cationic peroxidase [Beta vulgaris] 0.926 0.576 0.457 1e-45
115478557 328 Os09g0323700 [Oryza sativa Japonica Grou 0.837 0.518 0.534 5e-45
>gi|224134258|ref|XP_002321775.1| predicted protein [Populus trichocarpa] gi|222868771|gb|EEF05902.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  272 bits (696), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 132/190 (69%), Positives = 158/190 (83%), Gaps = 3/190 (1%)

Query: 14  VKQAVALLILRQCLLA-NIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVV 72
           +K   A L L    ++ N  G   GALQVGFYRGKCG ADVE IVAGV+TA+F RDP+ V
Sbjct: 1   MKAEAAFLTLALGFISVNFTGFCFGALQVGFYRGKCGFADVEAIVAGVITAQFFRDPSTV 60

Query: 73  AALIRLQFHDCFVNGCDASILIDATNSEKTAIPNLTIRGYDIIDEAKAAVEGFCPGVVSC 132
           AAL+RLQFHDCFVNGCDASIL+D +NSEKTAIPNL++RGY+IID+AKAAVE  CPGVVSC
Sbjct: 61  AALLRLQFHDCFVNGCDASILVDGSNSEKTAIPNLSVRGYEIIDQAKAAVENACPGVVSC 120

Query: 133 ADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQSVSISIPGPSASIPQTMAVFANKGL 192
           ADLIAIA RD VFL GGGRY+VQTGRRDGLVS A++V  S+PGP+ S+P+ +A F++KGL
Sbjct: 121 ADLIAIATRDVVFLSGGGRYDVQTGRRDGLVSAAKNV--SLPGPAISVPEAIAAFSDKGL 178

Query: 193 NLTDMVLLMG 202
            +T+MVLL+G
Sbjct: 179 TVTEMVLLLG 188

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255539977|ref|XP_002511053.1| Peroxidase 60 precursor, putative [Ricinus communis] gi|223550168|gb|EEF51655.1| Peroxidase 60 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296084891|emb|CBI28300.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359479498|ref|XP_002273582.2| PREDICTED: peroxidase 60-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449443638|ref|XP_004139584.1| PREDICTED: peroxidase 60-like [Cucumis sativus] gi|449515396|ref|XP_004164735.1| PREDICTED: peroxidase 60-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147781966|emb|CAN61172.1| hypothetical protein VITISV_005678 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224054470|ref|XP_002298276.1| predicted protein [Populus trichocarpa] gi|224100387|ref|XP_002334379.1| predicted protein [Populus trichocarpa] gi|222845534|gb|EEE83081.1| predicted protein [Populus trichocarpa] gi|222871937|gb|EEF09068.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|125563233|gb|EAZ08613.1| hypothetical protein OsI_30884 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|99646711|emb|CAK22416.1| cationic peroxidase [Beta vulgaris] Back     alignment and taxonomy information
>gi|115478557|ref|NP_001062872.1| Os09g0323700 [Oryza sativa Japonica Group] gi|48716991|dbj|BAD23683.1| putative peroxidase [Oryza sativa Japonica Group] gi|55701109|tpe|CAH69363.1| TPA: class III peroxidase 121 precursor [Oryza sativa Japonica Group] gi|113631105|dbj|BAF24786.1| Os09g0323700 [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query203
TAIR|locus:2176402 331 RHS18 "root hair specific 18" 0.886 0.543 0.491 7.8e-39
TAIR|locus:2096419 321 AT3G03670 [Arabidopsis thalian 0.857 0.542 0.463 4.9e-37
TAIR|locus:2175951 313 AT5G17820 [Arabidopsis thalian 0.812 0.527 0.485 1e-36
TAIR|locus:2207210 326 RCI3 "RARE COLD INDUCIBLE GENE 0.901 0.561 0.438 1.3e-36
TAIR|locus:2164366 328 AT5G64120 [Arabidopsis thalian 0.916 0.567 0.420 4e-35
TAIR|locus:2120760 310 AT4G26010 [Arabidopsis thalian 0.886 0.580 0.457 6.5e-35
TAIR|locus:2128308 326 AT4G11290 [Arabidopsis thalian 0.891 0.555 0.433 1.1e-34
TAIR|locus:2150946 329 AT5G15180 [Arabidopsis thalian 0.921 0.568 0.412 1.2e-33
TAIR|locus:2817952 325 AT1G05240 [Arabidopsis thalian 0.911 0.569 0.413 5.2e-33
TAIR|locus:2207215 325 AT1G05250 [Arabidopsis thalian 0.911 0.569 0.413 5.2e-33
TAIR|locus:2176402 RHS18 "root hair specific 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 92/187 (49%), Positives = 121/187 (64%)

Query:    18 VALLILRQCLLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIR 77
             + +LIL   LL+   G  +G L++GFY   C   +VE IV+ VV   FI+D ++  A+IR
Sbjct:     8 IEVLILSLALLSFGHGC-YGQLRLGFYSQNC--QNVENIVSKVVGEAFIKDSSIAPAMIR 64

Query:    78 LQFHDCFVNGCDASILIDATNSEKTAIPNLTIRGYDIIDEAKAAVEGFCPGVVSCADLIA 137
             L FHDCF NGCDAS+L+D +NSEK A PNL++RGY++ID+ K+AVE  C  VVSCAD+IA
Sbjct:    65 LYFHDCFSNGCDASLLLDGSNSEKKASPNLSVRGYEVIDDIKSAVEKECDRVVSCADIIA 124

Query:   138 IAARDAVFLGGGG--RYEVQTGRRDGLVSLAQXXXXXXXXXXXXXXQTMAVFANKGLNLT 195
             +A RD V L  GG  RYE+ TGR DG +S A               +T A F  + L+L 
Sbjct:   125 LATRDLVTLASGGKTRYEIPTGRLDGKISSA--LLVDLPSPKMTVAETAAKFDQRKLSLN 182

Query:   196 DMVLLMG 202
             DMVLL+G
Sbjct:   183 DMVLLLG 189
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010054 "trichoblast differentiation" evidence=RCA
GO:0048765 "root hair cell differentiation" evidence=RCA
TAIR|locus:2096419 AT3G03670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175951 AT5G17820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207210 RCI3 "RARE COLD INDUCIBLE GENE 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164366 AT5G64120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120760 AT4G26010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128308 AT4G11290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150946 AT5G15180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2817952 AT1G05240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207215 AT1G05250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.7LOW CONFIDENCE prediction!
3rd Layer1.11.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.XV.2553.1
hypothetical protein (300 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query203
cd00693 298 cd00693, secretory_peroxidase, Horseradish peroxid 8e-89
PLN03030 324 PLN03030, PLN03030, cationic peroxidase; Provision 2e-60
pfam00141180 pfam00141, peroxidase, Peroxidase 1e-59
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 3e-17
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 6e-06
cd00692 328 cd00692, ligninase, Ligninase and other manganese- 7e-04
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  262 bits (672), Expect = 8e-89
 Identities = 94/167 (56%), Positives = 118/167 (70%), Gaps = 6/167 (3%)

Query: 39  LQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDAT- 97
           L VGFY   C   + E IV  VV A    DP + AAL+RL FHDCFV GCDAS+L+D+T 
Sbjct: 2   LSVGFYSKSC--PNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTA 59

Query: 98  --NSEKTAIPNLTIRGYDIIDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEVQ 155
              SEK A PNL++RG+D+ID+ KAA+E  CPGVVSCAD++A+AARDAV L GG  YEV 
Sbjct: 60  NNTSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVP 119

Query: 156 TGRRDGLVSLAQSVSISIPGPSASIPQTMAVFANKGLNLTDMVLLMG 202
            GRRDG VS A  V  ++P P  S+ Q +++FA+KGL +TD+V L G
Sbjct: 120 LGRRDGRVSSANDVG-NLPSPFFSVSQLISLFASKGLTVTDLVALSG 165

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 203
PLN03030 324 cationic peroxidase; Provisional 100.0
cd00693 298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608 289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692 328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd00649 409 catalase_peroxidase_1 N-terminal catalytic domain 99.93
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.92
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 99.88
cd08200 297 catalase_peroxidase_2 C-terminal non-catalytic dom 99.86
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 99.76
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.75
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.41
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 96.25
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.1e-62  Score=439.48  Aligned_cols=166  Identities=53%  Similarity=0.902  Sum_probs=160.7

Q ss_pred             ccCCCCCCcccCCCCCchHHHHHHHHHHHHHhcCccchhhhHHhhhccccccCCCceeeccCCcccccCCCCCCcchhhH
Q 041339           35 SHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATNSEKTAIPNLTIRGYDI  114 (203)
Q Consensus        35 ~~~~l~~~fY~~sC~~P~~e~iVr~~v~~~~~~d~~~a~~lLRL~FHDcfv~GcDgSill~~~~~E~~~~~N~gL~g~~~  114 (203)
                      .+++|+++||++||  |++|+||+++|++++.+|++++|++||||||||||+||||||||+++..|+++++|.+|+||++
T Consensus        21 ~~~~L~~~fY~~sC--P~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~~Ek~a~~N~~l~Gf~~   98 (324)
T PLN03030         21 QGQGTRVGFYSTTC--PQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSNTEKTALPNLLLRGYDV   98 (324)
T ss_pred             hhccCccchhhCcC--CCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCcccccCCCCcCcchHHH
Confidence            45679999999999  9999999999999999999999999999999999999999999997668999999999999999


Q ss_pred             HHHHHHHHHhhCCCCCcHHHHHHHhhhhhhhhcCCcceeeccCccCCCCCccccccCCCCCCCCCHHHHHHHHHHCCCCc
Q 041339          115 IDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQSVSISIPGPSASIPQTMAVFANKGLNL  194 (203)
Q Consensus       115 i~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~a~~~LP~p~~~~~~l~~~F~~~Gl~~  194 (203)
                      |+.||+++|+.||++|||||||++|+||+|+++|||.|+|++||||+++|.+..+. +||.|+.++++|++.|+++|||.
T Consensus        99 i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~~  177 (324)
T PLN03030         99 IDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGLNT  177 (324)
T ss_pred             HHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCCCH
Confidence            99999999999999999999999999999999999999999999999999887774 89999999999999999999999


Q ss_pred             cchhhccCC
Q 041339          195 TDMVLLMGI  203 (203)
Q Consensus       195 ~dlVaLsGA  203 (203)
                      +|||+||||
T Consensus       178 ~DlVaLsGA  186 (324)
T PLN03030        178 QDLVTLVGG  186 (324)
T ss_pred             HHheeeeec
Confidence            999999997

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query203
3hdl_A 304 Crystal Structure Of Highly Glycosylated Peroxidase 2e-33
1qgj_A 300 Arabidopsis Thaliana Peroxidase N Length = 300 1e-31
1fhf_A 304 The Structure Of Soybean Peroxidase Length = 304 2e-30
1sch_A 294 Peanut Peroxidase Length = 294 2e-29
1gx2_A 309 Recombinant Horseradish Peroxidase Phe209ser Comple 4e-29
3atj_A 309 Heme Ligand Mutant Of Recombinant Horseradish Perox 4e-29
1gwo_A 309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 4e-29
2ylj_A 306 Horse Radish Peroxidase, Mutant S167y Length = 306 4e-29
1gw2_A 308 Recombinant Horseradish Peroxidase C1a Thr171ser In 4e-29
2atj_A 308 Recombinant Horseradish Peroxidase Complex With Ben 4e-29
1pa2_A 306 Arabidopsis Thaliana Peroxidase A2 Length = 306 5e-29
6atj_A 308 Recombinant Horseradish Peroxidase C Complex With F 5e-29
1w4w_A 323 Ferric Horseradish Peroxidase C1a In Complex With F 5e-29
1atj_A 306 Recombinant Horseradish Peroxidase C1a Length = 306 5e-29
4a5g_A 308 Raphanus Sativus Anionic Peroxidase. Length = 308 5e-29
1gwu_A 309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 7e-29
4atj_A 309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 5e-28
1kzm_A 308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 2e-27
1bgp_A 309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 1e-20
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  138 bits (348), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/168 (46%), Positives = 100/168 (59%), Gaps = 6/168 (3%)
Query: 39  LQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDAT- 97
           LQ+GFY   C  A  E +V   V A F  +  +   LIR+ FHDCFV GCDAS+L+D+T 
Sbjct: 2   LQIGFYNTSCPTA--ESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTA 59
Query: 98  --NSEKTAIPN-LTIRGYDIIDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEV 154
              +EK AIPN  ++RG+++I  AK+AVE  CP  VSCAD++A AARD+  L G   Y+V
Sbjct: 60  NNTAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQV 119
Query: 155 QTGRRDGLVSLAQXXXXXXXXXXXXXXQTMAVFANKGLNLTDMVLLMG 202
            +GRRDG VSLA               Q +  FANK L   +MV L G
Sbjct: 120 PSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSG 167
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query203
1qgj_A 300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 6e-86
3hdl_A 304 Royal PALM TREE peroxidase; glycosylated, oxidored 7e-86
1pa2_A 306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 6e-85
1fhf_A 304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 9e-85
1sch_A 294 PNP, peanut peroxidase, major cationic isozyme; ca 2e-84
1gwu_A 309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 4e-83
1bgp_A 309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-80
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 1e-35
1iyn_A 295 Chloroplastic ascorbate peroxidase; hydrogen perox 1e-34
3fmu_A 331 VersatIle peroxidase VPL2; class II (fungal) perox 2e-34
2e39_A 344 Peroxidase; heme protein, coordination geometry of 4e-32
3m5q_A 357 Manganese peroxidase 1; heme, Mn(II)-binding site, 2e-31
3q3u_A 338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 3e-30
1llp_A 343 LIP4.15, lignin peroxidase; heme protein, glyco pr 9e-29
3riv_A 271 Ascorbate peroxidase; alpha helical bundle, heme p 2e-04
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
 Score =  254 bits (652), Expect = 6e-86
 Identities = 77/165 (46%), Positives = 104/165 (63%), Gaps = 4/165 (2%)

Query: 39  LQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATN 98
           L    Y   C   ++  IV   V      +  + A+LIRL FHDCFVNGCDAS+L+D  +
Sbjct: 2   LSPDIYAKSC--PNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGAD 59

Query: 99  SEKTAIPNL-TIRGYDIIDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTG 157
           SEK AIPN+ + RG+++ID  KAAVE  CPGVVSCAD++ +AARD+V L GG  + V  G
Sbjct: 60  SEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALG 119

Query: 158 RRDGLVSLAQSVSISIPGPSASIPQTMAVFANKGLNLTDMVLLMG 202
           R+DGLV+   S + ++P P   +   +A F    LN+TD+V L G
Sbjct: 120 RKDGLVANQNSAN-NLPSPFEPLDAIIAKFVAVNLNITDVVALSG 163
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query203
3hdl_A 304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1sch_A 294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1qgj_A 300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1fhf_A 304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1gwu_A 309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1pa2_A 306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1bgp_A 309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1iyn_A 295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
2e39_A 344 Peroxidase; heme protein, coordination geometry of 100.0
1llp_A 343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
3riv_A 271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3m5q_A 357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3fmu_A 331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3e2o_A 294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3q3u_A 338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
1u2k_A 309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 99.97
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 99.96
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 99.96
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=1.9e-63  Score=440.78  Aligned_cols=163  Identities=49%  Similarity=0.847  Sum_probs=158.9

Q ss_pred             CCCCcccCCCCCchHHHHHHHHHHHHHhcCccchhhhHHhhhccccccCCCceeeccCCc---ccccCCCCC-CcchhhH
Q 041339           39 LQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATN---SEKTAIPNL-TIRGYDI  114 (203)
Q Consensus        39 l~~~fY~~sC~~P~~e~iVr~~v~~~~~~d~~~a~~lLRL~FHDcfv~GcDgSill~~~~---~E~~~~~N~-gL~g~~~  114 (203)
                      |+++||++||  |++|+|||+.|++++.+|++++|++||||||||||+||||||||++++   .|+++++|. ||+||++
T Consensus         2 L~~~fY~~sC--P~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~v   79 (304)
T 3hdl_A            2 LQIGFYNTSC--PTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEV   79 (304)
T ss_dssp             CEETTTTTTC--TTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHH
T ss_pred             CccChhhCcC--cCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHH
Confidence            7899999999  999999999999999999999999999999999999999999999875   799999998 8999999


Q ss_pred             HHHHHHHHHhhCCCCCcHHHHHHHhhhhhhhhcCCcceeeccCccCCCCCccccccCCCCCCCCCHHHHHHHHHHCCCCc
Q 041339          115 IDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQSVSISIPGPSASIPQTMAVFANKGLNL  194 (203)
Q Consensus       115 i~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~a~~~LP~p~~~~~~l~~~F~~~Gl~~  194 (203)
                      |+.||++||+.||++|||||||+||+|+||+++|||.|+|++||+|++++++..++++||+|+.++++|++.|++||||.
T Consensus        80 id~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  159 (304)
T 3hdl_A           80 ITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTA  159 (304)
T ss_dssp             HHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCH
T ss_pred             HHHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCH
Confidence            99999999999999999999999999999999999999999999999999988887889999999999999999999999


Q ss_pred             cchhhccCC
Q 041339          195 TDMVLLMGI  203 (203)
Q Consensus       195 ~dlVaLsGA  203 (203)
                      +||||||||
T Consensus       160 ~d~VaLsGa  168 (304)
T 3hdl_A          160 DEMVTLSGA  168 (304)
T ss_dssp             HHHHHHGGG
T ss_pred             HHhhhhhcc
Confidence            999999997
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 203
d1qgja_ 300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 7e-64
d1fhfa_ 304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 4e-62
d1pa2a_ 306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-61
d1scha_ 294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-58
d1gwua_ 307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 8e-58
d1bgpa_ 309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 4e-56
d1yyda1 357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 1e-31
d1llpa_ 343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 2e-30
d2e39a1 336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 1e-27
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 1e-23
d1iyna_ 275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 5e-20
d2euta1 291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 1e-14
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]

 Score =  197 bits (502), Expect = 7e-64
 Identities = 77/166 (46%), Positives = 104/166 (62%), Gaps = 4/166 (2%)

Query: 39  LQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATN 98
           L    Y   C   ++  IV   V      +  + A+LIRL FHDCFVNGCDAS+L+D  +
Sbjct: 2   LSPDIYAKSC--PNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGAD 59

Query: 99  SEKTAIPNLT-IRGYDIIDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTG 157
           SEK AIPN+   RG+++ID  KAAVE  CPGVVSCAD++ +AARD+V L GG  + V  G
Sbjct: 60  SEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALG 119

Query: 158 RRDGLVSLAQSVSISIPGPSASIPQTMAVFANKGLNLTDMVLLMGI 203
           R+DGLV+  Q+ + ++P P   +   +A F    LN+TD+V L G 
Sbjct: 120 RKDGLVA-NQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGA 164
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query203
d1fhfa_ 304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_ 306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_ 300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_ 307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_ 309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_ 294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1iyna_ 275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1 357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1 336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_ 343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1 291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2 308 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.86
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.85
d1u2ka_ 292 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.84
d1itka2 308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.82
d1ub2a2 294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.82
d1itka1 406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.82
d1mwva1 406 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.79
d1ub2a1 406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.76
d2ccaa1 410 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.7
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=1.1e-61  Score=427.53  Aligned_cols=164  Identities=46%  Similarity=0.780  Sum_probs=159.2

Q ss_pred             CCCCCcccCCCCCchHHHHHHHHHHHHHhcCccchhhhHHhhhccccccCCCceeeccCCc---ccccCCCCCC-cchhh
Q 041339           38 ALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATN---SEKTAIPNLT-IRGYD  113 (203)
Q Consensus        38 ~l~~~fY~~sC~~P~~e~iVr~~v~~~~~~d~~~a~~lLRL~FHDcfv~GcDgSill~~~~---~E~~~~~N~g-L~g~~  113 (203)
                      ||+.+||++||  |++|+||+++|++.+.+|++++|++|||+||||||+||||||||++++   .|+++++|.+ ++||+
T Consensus         1 qL~~~~Y~~sC--p~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~   78 (304)
T d1fhfa_           1 QLTPTFYRETC--PNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLD   78 (304)
T ss_dssp             CCBTTTTTTTS--TTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHH
T ss_pred             CCCCccccccC--cCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHH
Confidence            79999999999  999999999999999999999999999999999999999999999876   7999999986 58999


Q ss_pred             HHHHHHHHHHhhCCCCCcHHHHHHHhhhhhhhhcCCcceeeccCccCCCCCccccccCCCCCCCCCHHHHHHHHHHCCCC
Q 041339          114 IIDEAKAAVEGFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQSVSISIPGPSASIPQTMAVFANKGLN  193 (203)
Q Consensus       114 ~i~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~a~~~LP~p~~~~~~l~~~F~~~Gl~  193 (203)
                      +|+.||++||..||++|||||||+||||+||+++|||.|+|++||+|+++|+...+.++||.|+.++++|++.|++||||
T Consensus        79 ~id~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  158 (304)
T d1fhfa_          79 VVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLN  158 (304)
T ss_dssp             HHHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999988877788999999999999999999999


Q ss_pred             ccchhhccCC
Q 041339          194 LTDMVLLMGI  203 (203)
Q Consensus       194 ~~dlVaLsGA  203 (203)
                      .+||||||||
T Consensus       159 ~~d~VaLsGa  168 (304)
T d1fhfa_         159 TLDLVTLSGG  168 (304)
T ss_dssp             HHHHHHHGGG
T ss_pred             HHHHHHHhhh
Confidence            9999999997
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure