Citrus Sinensis ID: 041373

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-----

MKETEHKNPLCKNVPSLLSSFVDTFVDFTVSGGLFLPNPDPKTSQNVREPTTRLPRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGDSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLTANPLYQNKNKVYLAPDSKEGLGLLLPDYEPKQVEVKA

ccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccEEEEEccccccHHHHHHHHHHcccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHcccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccEEEEccEEEEcccccHHHHHHcHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHccHHHHHHHHHccccccEEEEccccccccccccccccEEEEEccccccccccccEEEEEEcccEEEEEEcccccccccccccccccccccccccccccccEEEEcc

cccccccccHHHHcccHccccHccEEEEcccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHccccccccccEcccEEEEEEcccccccccHHHHHHHHHHHHHHHHHcccEEEEEEcccHEEEEcccccEcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHcccccccccccHHccccHHHHHHHcccccHHHHHHHHcccEEEEEccEEEEEccccHHHHHccHHHHHHHHHHHHHcccccccccHcccccccEEEEccccccccHcHHHHHHHHHHHccccEEEEEccccccccEEEEccEEEEEEccccccccccccEEEEEEccccEEEEEccccccccccccccccccccEEEEEccccccEEEEEc

mketehknplcknvpsLLSSFVDTFVDFtvsgglflpnpdpktsqnvrepttrlprvDRLIAIGDLHGDLEKSKQALRLAGlingsdqwtggtATVVQIgdvldrgdDEIKILYLLEKLKREAEKSggkfitmngnheiMNIEADFRYATEMGLKEFEDWANWYCignkmkslcvglekpkdlfsgipLAFKSMAKEYHNGVRARIAalrpdgpiarrflsenttvlVVGDSVFVHGGLLKQHVEYGLERINREVRDWINglmgksapgyckgrhAVVWLRKfsdeekkcdCSALEHALATIPGVKRMIMGHTIqekginavcdnrairidvglsrgcydglpevleingnsellvltanplyqnknkvylapdskeglglllpdyepkqvevka

mketehknplcknvPSLLSSFVDTFVDFTVSGGLflpnpdpktsqnvrepttrlprvdRLIAIGDLHGDLEKSKQALRLAGLingsdqwtggtATVVQigdvldrgdDEIKILYLLEKLKREAEksggkfitmngnhEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGDSVFVHGGLLKQHVEYGLERINREVRDWINGLmgksapgyckgRHAVVWLRKFSDEEKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLTANPLYQNKNKVYLAPDSKeglglllpdyepkqvevka

MKETEHKNPLCKNVPSLLSSFVDTFVDFTVSGGLFLPNPDPKTSQNVREPTTRLPRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDeikilylleklkREAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGDSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLTANPLYQNKNKVYLAPDSKEGLGLLLPDYEPKQVEVKA

**********CKNVPSLLSSFVDTFVDFTVSGGLFL*******************RVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGDSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLTANPLYQNKNKVYLAPDSKEGLGLLL************

**********CKNVPSLLSSFVDTFVDFTVSG**********************PRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGDSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLTANP******************GLLLP***********

*********LCKNVPSLLSSFVDTFVDFTVSGGLFLPNPDPKTSQNVREPTTRLPRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGDSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLTANPLYQNKNKVYLAPDSKEGLGLLLPDYEPKQVEVKA

*******NPLCKNVPSLLSSFVDTFVDFTVSGGLFLPNPDPKTSQNVREPTTRLPRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGDSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLTANPLYQNKNKVYLAPDSKEGLGLLLPDYEPKQVEVKA

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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SSSSSSSSSSSSSiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		395	2.2.26 [Sep-21-2011]
Q944L7		391	Uncharacterized protein A	yes	no	0.984	0.994	0.654	1e-154
O74480		332	Uncharacterized protein C	yes	no	0.660	0.786	0.282	1e-22
Q5UQJ8		252	Uncharacterized protein R	N/A	no	0.539	0.845	0.222	3e-08

>sp\|Q944L7\|Y1480_ARATH Uncharacterized protein At1g18480 OS=Arabidopsis thaliana GN=At1g18480 PE=2 SV=1	Back alignment and function desciption

 Score =  544 bits (1401), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 260/397 (65%), Positives = 327/397 (82%), Gaps = 8/397 (2%)

Query: 1   MKETEHKNPLCKNVPSLLSSFVDTFVDFTVSGGLFLPNPDPKTSQNVREPTTRLPRVDRL 60
           M   E+ + +CK++P L+SSFVDTFVD++VSG +FLP  DP +   + +  TR  + +RL
Sbjct: 1   MSSRENPSGICKSIPKLISSFVDTFVDYSVSG-IFLPQ-DPSSQNEILQ--TRFEKPERL 56

Query: 61  IAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLK 120
           +AIGDLHGDLEKS++A ++AGLI+ SD+WTGG+  VVQ+GDVLDRG +E+KILY LEKLK
Sbjct: 57  VAIGDLHGDLEKSREAFKIAGLIDSSDRWTGGSTMVVQVGDVLDRGGEELKILYFLEKLK 116

Query: 121 REAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKP 180
           REAE++GGK +TMNGNHEIMNIE DFRY T+ GL+EF+ WA+WYC+GNKMK+LC GL+KP
Sbjct: 117 REAERAGGKILTMNGNHEIMNIEGDFRYVTKKGLEEFQIWADWYCLGNKMKTLCSGLDKP 176

Query: 181 KDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGDSVFVHGGLL 240
           KD + GIP++F  M  +   G+RARIAALRPDGPIA+RFL++N TV VVGDSVFVHGGLL
Sbjct: 177 KDPYEGIPMSFPRMRADCFEGIRARIAALRPDGPIAKRFLTKNQTVAVVGDSVFVHGGLL 236

Query: 241 KQHVEYGLERINREVRDWINGLM-GKSAPGYCKGRHAVVWLRKFSDE-EKKCDCSALEHA 298
            +H+EYGLERIN EVR WING   G+ AP YC+G ++VVWLRKFS+E   KCDC+ALEHA
Sbjct: 237 AEHIEYGLERINEEVRGWINGFKGGRYAPAYCRGGNSVVWLRKFSEEMAHKCDCAALEHA 296

Query: 299 LATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLT 358
           L+TIPGVKRMIMGHTIQ+ GIN VC+++AIRIDVG+S+GC DGLPEVLEI  +S + ++T
Sbjct: 297 LSTIPGVKRMIMGHTIQDAGINGVCNDKAIRIDVGMSKGCADGLPEVLEIRRDSGVRIVT 356

Query: 359 ANPLYQNKNKVYLAPDSKEGLGLLLPDYEPKQVEVKA 395
           +NPLY+     ++APDSK GLGLL+P   PKQVEVKA
Sbjct: 357 SNPLYKENLYSHVAPDSKTGLGLLVP--VPKQVEVKA 391

Arabidopsis thaliana (taxid: 3702)

>sp\|O74480\|YQJ7_SCHPO Uncharacterized protein C1840.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1840.07c PE=4 SV=1	Back alignment and function description

>sp\|Q5UQJ8\|YR398_MIMIV Uncharacterized protein R398 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R398 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		395
224121972		402	predicted protein [Populus trichocarpa]	0.984	0.967	0.741	1e-173
255567786		399	hydrolase, putative [Ricinus communis] g	1.0	0.989	0.729	1e-170
18394613		391	calcineurin-like phosphoesterase family	0.984	0.994	0.654	1e-152
21536655		391	unknown [Arabidopsis thaliana]	0.984	0.994	0.652	1e-152
297844794		391	hypothetical protein ARALYDRAFT_472067 [	0.984	0.994	0.652	1e-151
58743497		394	Putative [Brassica oleracea]	0.987	0.989	0.646	1e-148
449435093		400	PREDICTED: uncharacterized protein At1g1	0.972	0.96	0.655	1e-147
225431747		401	PREDICTED: uncharacterized protein At1g1	0.959	0.945	0.668	1e-144
356571320		386	PREDICTED: uncharacterized protein At1g1	0.974	0.997	0.651	1e-141
6714305		1702	F15H18.4 [Arabidopsis thaliana]	0.906	0.210	0.656	1e-140

>gi\|224121972\|ref\|XP_002330699.1\| predicted protein [Populus trichocarpa] gi\|222872303\|gb\|EEF09434.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 296/399 (74%), Positives = 339/399 (84%), Gaps = 10/399 (2%)

Query: 5   EHKNPLCKNVPSLLSSFVDTFVDFTVSGGLFLPNPDPKTSQNVREP--------TTRLPR 56
           E++  LCK++P LLSSFVDTFVDF+VSGGLFLP+ +P  S + R P         TR P 
Sbjct: 6   ENRKALCKHIPDLLSSFVDTFVDFSVSGGLFLPSQNP--SLDPRNPHQETPLSLQTRYPA 63

Query: 57  VDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLL 116
            DRLIAIGDLHGDLEKSKQALRLAGLI+GSD+W GG+AT VQ+GDVLDRGDDEI+ILY L
Sbjct: 64  PDRLIAIGDLHGDLEKSKQALRLAGLIDGSDKWAGGSATAVQVGDVLDRGDDEIQILYFL 123

Query: 117 EKLKREAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVG 176
           EKLKREA K GG FITMNGNHEIMNIE DFRY T++GLKEFEDWA WYC+GN+MKSLCVG
Sbjct: 124 EKLKREAMKDGGNFITMNGNHEIMNIEGDFRYVTKLGLKEFEDWAYWYCLGNEMKSLCVG 183

Query: 177 LEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGDSVFVH 236
           LEKPKD++ GIPL F+ +  E   G+RARIAALRP+GPIA +FLS+N TVLVVGDS+FVH
Sbjct: 184 LEKPKDIYDGIPLNFRGVDSEVLQGIRARIAALRPNGPIANKFLSKNVTVLVVGDSIFVH 243

Query: 237 GGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCSALE 296
           GGLL QHVEYGLERIN EVRDWI+GLMGK+AP YC+GR+AVVWLRK+SD EK CDCS LE
Sbjct: 244 GGLLAQHVEYGLERINEEVRDWISGLMGKAAPRYCRGRNAVVWLRKYSDVEKNCDCSMLE 303

Query: 297 HALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLV 356
           H LAT+PGVKRMIMGHTIQE GIN  C+NRA+RIDVG+S+GC DGLPEVLEIN NS+L V
Sbjct: 304 HVLATVPGVKRMIMGHTIQEDGINVACNNRAVRIDVGMSKGCGDGLPEVLEINQNSDLRV 363

Query: 357 LTANPLYQNKNKVYLAPDSKEGLGLLLPDYEPKQVEVKA 395
           LT+NPLYQ+K+K YL  D+KEGLGLL+ +   KQVEVKA
Sbjct: 364 LTSNPLYQSKHKSYLDADTKEGLGLLITESGSKQVEVKA 402

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255567786\|ref\|XP_002524871.1\| hydrolase, putative [Ricinus communis] gi\|223535834\|gb\|EEF37495.1\| hydrolase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi|18394613|ref|NP_564053.1| calcineurin-like phosphoesterase family protein [Arabidopsis thaliana] gi|75249570|sp|Q944L7.1|Y1480_ARATH RecName: Full=Uncharacterized protein At1g18480 gi|16226290|gb|AAL16125.1|AF428293_1 At1g18480/F15H18_1 [Arabidopsis thaliana] gi|23308175|gb|AAN18057.1| At1g18480/F15H18_1 [Arabidopsis thaliana] gi|332191598|gb|AEE29719.1| calcineurin-like phosphoesterase family protein [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|21536655\|gb\|AAM60987.1\| unknown [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297844794\|ref\|XP_002890278.1\| hypothetical protein ARALYDRAFT_472067 [Arabidopsis lyrata subsp. lyrata] gi\|297336120\|gb\|EFH66537.1\| hypothetical protein ARALYDRAFT_472067 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|58743497\|gb\|AAW81738.1\| Putative [Brassica oleracea]	Back alignment and taxonomy information

>gi\|449435093\|ref\|XP_004135330.1\| PREDICTED: uncharacterized protein At1g18480-like [Cucumis sativus] gi\|449521846\|ref\|XP_004167940.1\| PREDICTED: uncharacterized protein At1g18480-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|225431747\|ref\|XP_002269760.1\| PREDICTED: uncharacterized protein At1g18480-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356571320\|ref\|XP_003553826.1\| PREDICTED: uncharacterized protein At1g18480-like [Glycine max]	Back alignment and taxonomy information

>gi\|6714305\|gb\|AAF26001.1\|AC013354_20 F15H18.4 [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		395
TAIR\|locus:2014079		391	SLP2 "AT1G18480" [Arabidopsis	0.984	0.994	0.629	3.2e-136
TAIR\|locus:2007472		400	SLP1 "AT1G07010" [Arabidopsis	0.8	0.79	0.341	8.7e-40
POMBASE\|SPCC1840.07c		332	SPCC1840.07c "phosphoprotein p	0.265	0.316	0.4	4.4e-24
UNIPROTKB\|Q8EBN0		384	SO_3480 "Cold-active protein-t	0.291	0.299	0.284	2.4e-10
TIGR_CMR\|SO_3480		384	SO_3480 "conserved hypothetica	0.291	0.299	0.284	2.4e-10
UNIPROTKB\|Q3Z9Q8		1457	DET0270 "Ser/Thr protein phosp	0.668	0.181	0.251	0.0001
TIGR_CMR\|DET_0270		1457	DET_0270 "Ser/Thr protein phos	0.668	0.181	0.251	0.0001
TIGR_CMR\|DET_0293		1457	DET_0293 "Ser/Thr protein phos	0.668	0.181	0.251	0.0001
TIGR_CMR\|DET_0903		1457	DET_0903 "Ser/Thr protein phos	0.668	0.181	0.251	0.0001

TAIR\|locus:2014079 SLP2 "AT1G18480" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1334 (474.7 bits), Expect = 3.2e-136, P = 3.2e-136
 Identities = 250/397 (62%), Positives = 316/397 (79%)

Query:     1 MKETEHKNPLCKNVPSLLSSFVDTFVDFTVSGGLFLPNPDPKTSQNVREPTTRLPRVDRL 60
             M   E+ + +CK++P L+SSFVDTFVD++VSG +FLP  DP +   + +  TR  + +RL
Sbjct:     1 MSSRENPSGICKSIPKLISSFVDTFVDYSVSG-IFLPQ-DPSSQNEILQ--TRFEKPERL 56

Query:    61 IAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDXXXXXXXXXXXX 120
             +AIGDLHGDLEKS++A ++AGLI+ SD+WTGG+  VVQ+GDVLDRG +            
Sbjct:    57 VAIGDLHGDLEKSREAFKIAGLIDSSDRWTGGSTMVVQVGDVLDRGGEELKILYFLEKLK 116

Query:   121 REAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKP 180
             REAE++GGK +TMNGNHEIMNIE DFRY T+ GL+EF+ WA+WYC+GNKMK+LC GL+KP
Sbjct:   117 REAERAGGKILTMNGNHEIMNIEGDFRYVTKKGLEEFQIWADWYCLGNKMKTLCSGLDKP 176

Query:   181 KDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGDSVFVHGGLL 240
             KD + GIP++F  M  +   G+RARIAALRPDGPIA+RFL++N TV VVGDSVFVHGGLL
Sbjct:   177 KDPYEGIPMSFPRMRADCFEGIRARIAALRPDGPIAKRFLTKNQTVAVVGDSVFVHGGLL 236

Query:   241 KQHVEYGLERINREVRDWINGLMG-KSAPGYCKGRHAVVWLRKFSDE-EKKCDCSALEHA 298
              +H+EYGLERIN EVR WING  G + AP YC+G ++VVWLRKFS+E   KCDC+ALEHA
Sbjct:   237 AEHIEYGLERINEEVRGWINGFKGGRYAPAYCRGGNSVVWLRKFSEEMAHKCDCAALEHA 296

Query:   299 LATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLT 358
             L+TIPGVKRMIMGHTIQ+ GIN VC+++AIRIDVG+S+GC DGLPEVLEI  +S + ++T
Sbjct:   297 LSTIPGVKRMIMGHTIQDAGINGVCNDKAIRIDVGMSKGCADGLPEVLEIRRDSGVRIVT 356

Query:   359 ANPLYQNKNKVYLAPDSKEGLGLLLPDYEPKQVEVKA 395
             +NPLY+     ++APDSK GLGLL+P   PKQVEVKA
Sbjct:   357 SNPLYKENLYSHVAPDSKTGLGLLVP--VPKQVEVKA 391

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

TAIR\|locus:2007472 SLP1 "AT1G07010" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

POMBASE\|SPCC1840.07c SPCC1840.07c "phosphoprotein phosphatase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8EBN0 SO_3480 "Cold-active protein-tyrosine phosphatase" [Shewanella oneidensis MR-1 (taxid:211586)]	Back alignment and assigned GO terms

TIGR_CMR\|SO_3480 SO_3480 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)]	Back alignment and assigned GO terms

UNIPROTKB\|Q3Z9Q8 DET0270 "Ser/Thr protein phosphatase family protein" [Dehalococcoides ethenogenes 195 (taxid:243164)]	Back alignment and assigned GO terms

TIGR_CMR\|DET_0270 DET_0270 "Ser/Thr protein phosphatase family protein" [Dehalococcoides ethenogenes 195 (taxid:243164)]	Back alignment and assigned GO terms

TIGR_CMR\|DET_0293 DET_0293 "Ser/Thr protein phosphatase family protein" [Dehalococcoides ethenogenes 195 (taxid:243164)]	Back alignment and assigned GO terms

TIGR_CMR\|DET_0903 DET_0903 "Ser/Thr protein phosphatase family protein" [Dehalococcoides ethenogenes 195 (taxid:243164)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q944L7	Y1480_ARATH	No assigned EC number	0.6549	0.9848	0.9948	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		395
cd07425		208	cd07425, MPP_Shelphs, Shewanella-like phosphatases	7e-80
cd00144		225	cd00144, MPP_PPP_family, phosphoprotein phosphatas	3e-08
pfam00149		185	pfam00149, Metallophos, Calcineurin-like phosphoes	1e-06
cd07413		222	cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087	1e-04
PRK09968		218	PRK09968, PRK09968, serine/threonine-specific prot	3e-04
PRK11439		218	PRK11439, pphA, serine/threonine protein phosphata	0.001
cd00838		131	cd00838, MPP_superfamily, metallophosphatase super	0.002
cd07421		304	cd07421, MPP_Rhilphs, Rhilph phosphatases, metallo	0.003

>gnl\|CDD\|163668 cd07425, MPP_Shelphs, Shewanella-like phosphatases, metallophosphatase domain	Back alignment and domain information

 Score =  244 bits (624), Expect = 7e-80
 Identities = 94/286 (32%), Positives = 128/286 (44%), Gaps = 79/286 (27%)

Query: 61  IAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLK 120
           +AIGDLHGDL+  ++ L+ AG+I+ +D W GG+  +VQ+GD+ DRG D I+IL+LL KL+
Sbjct: 1   VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLE 60

Query: 121 REAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKP 180
           +EA K+GGK   + GNHE+MN+  DFRY       EF   A                   
Sbjct: 61  QEAAKAGGKVHFLLGNHELMNLCGDFRYVHPKYFNEFGGLAM------------------ 102

Query: 181 KDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGDSVFVHGGLL 240
                                   R   L   G    R+L     ++ V D++FVHGGL 
Sbjct: 103 ------------------------RRRELFSPGGELGRWLRSKPVIVKVNDTLFVHGGL- 137

Query: 241 KQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEE-KKCDCSALEHAL 299
                                                +W R +S E   K   +A    +
Sbjct: 138 -----------------------------------GPLWYRGYSKETSDKECAAAHLDKV 162

Query: 300 ATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEV 345
               G KRM++GHT QE GI   C  + IRIDVG+S+G Y G  EV
Sbjct: 163 LERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGMSKGVYGGPLEV 208

This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 208

>gnl\|CDD\|163613 cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain	Back alignment and domain information

>gnl\|CDD\|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase	Back alignment and domain information

>gnl\|CDD\|163656 cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain	Back alignment and domain information

>gnl\|CDD\|182173 PRK09968, PRK09968, serine/threonine-specific protein phosphatase 2; Provisional	Back alignment and domain information

>gnl\|CDD\|236911 PRK11439, pphA, serine/threonine protein phosphatase 1; Provisional	Back alignment and domain information

>gnl\|CDD\|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain	Back alignment and domain information

>gnl\|CDD\|163664 cd07421, MPP_Rhilphs, Rhilph phosphatases, metallophosphatase domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		395
cd07425		208	MPP_Shelphs Shewanella-like phosphatases, metallop	100.0
PRK13625		245	bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision	100.0
PHA02239		235	putative protein phosphatase	100.0
cd07413		222	MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat	100.0
cd07421		304	MPP_Rhilphs Rhilph phosphatases, metallophosphatas	100.0
cd07423		234	MPP_PrpE Bacillus subtilis PrpE and related protei	100.0
PRK11439		218	pphA serine/threonine protein phosphatase 1; Provi	100.0
PRK00166		275	apaH diadenosine tetraphosphatase; Reviewed	100.0
TIGR00668		279	apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric	99.98
cd07420		321	MPP_RdgC Drosophila melanogaster RdgC and related	99.97
cd07422		257	MPP_ApaH Escherichia coli ApaH and related protein	99.97
cd07417		316	MPP_PP5_C PP5, C-terminal metallophosphatase domai	99.97
PRK09968		218	serine/threonine-specific protein phosphatase 2; P	99.96
smart00156		271	PP2Ac Protein phosphatase 2A homologues, catalytic	99.96
cd07419		311	MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a	99.96
cd07415		285	MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein	99.96
cd00144		225	MPP_PPP_family phosphoprotein phosphatases of the	99.95
cd07424		207	MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do	99.95
PTZ00244		294	serine/threonine-protein phosphatase PP1; Provisio	99.95
PTZ00480		320	serine/threonine-protein phosphatase; Provisional	99.95
cd07414		293	MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme	99.95
PTZ00239		303	serine/threonine protein phosphatase 2A; Provision	99.95
cd07416		305	MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca	99.95
cd07418		377	MPP_PP7 PP7, metallophosphatase domain. PP7 is a p	99.95
KOG0372		303	consensus Serine/threonine specific protein phosph	99.94
KOG0374		331	consensus Serine/threonine specific protein phosph	99.93
KOG0373		306	consensus Serine/threonine specific protein phosph	99.9
KOG0371		319	consensus Serine/threonine protein phosphatase 2A,	99.87
KOG0377		631	consensus Protein serine/threonine phosphatase RDG	99.87
KOG0375		517	consensus Serine-threonine phosphatase 2B, catalyt	99.86
KOG0376		476	consensus Serine-threonine phosphatase 2A, catalyt	99.65
PRK09453		182	phosphodiesterase; Provisional	99.46
TIGR00040		158	yfcE phosphoesterase, MJ0936 family. Members of th	99.38
cd00841		155	MPP_YfcE Escherichia coli YfcE and related protein	99.22
PF12850		156	Metallophos_2: Calcineurin-like phosphoesterase su	99.14
cd07397		238	MPP_DevT Myxococcus xanthus DevT and related prote	98.98
PRK05340		241	UDP-2,3-diacylglucosamine hydrolase; Provisional	98.97
cd07394		178	MPP_Vps29 Homo sapiens Vps29 and related proteins,	98.9
cd07379		135	MPP_239FB Homo sapiens 239FB and related proteins,	98.88
cd07392		188	MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel	98.76
PF00149		200	Metallophos: Calcineurin-like phosphoesterase; Int	98.76
cd07388		224	MPP_Tt1561 Thermus thermophilus Tt1561 and related	98.72
COG0622		172	Predicted phosphoesterase [General function predic	98.59
cd07402		240	MPP_GpdQ Enterobacter aerogenes GpdQ and related p	98.46
PRK11148		275	cyclic 3',5'-adenosine monophosphate phosphodieste	98.39
PF06874		640	FBPase_2: Firmicute fructose-1,6-bisphosphatase; I	98.38
cd07398		217	MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat	98.35
COG2129		226	Predicted phosphoesterases, related to the Icc pro	98.34
cd07383		199	MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase	98.31
PRK04036		504	DNA polymerase II small subunit; Validated	98.26
cd07399		214	MPP_YvnB Bacillus subtilis YvnB and related protei	98.21
PRK11340		271	phosphodiesterase YaeI; Provisional	98.17
cd07385		223	MPP_YkuE_C Bacillus subtilis YkuE and related prot	98.16
cd07404		166	MPP_MS158 Microscilla MS158 and related proteins,	98.0
TIGR03729		239	acc_ester putative phosphoesterase. Members of thi	98.0
cd00838		131	MPP_superfamily metallophosphatase superfamily, me	97.95
TIGR00619		253	sbcd exonuclease SbcD. This family is based on the	97.95
PHA02546		340	47 endonuclease subunit; Provisional	97.93
cd07396		267	MPP_Nbla03831 Homo sapiens Nbla03831 and related p	97.85
TIGR01854		231	lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase.	97.8
cd07391		172	MPP_PF1019 Pyrococcus furiosus PF1019 and related	97.64
cd00840		223	MPP_Mre11_N Mre11 nuclease, N-terminal metallophos	97.63
cd07403		129	MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel	97.61
cd07390		168	MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro	97.61
PRK10966		407	exonuclease subunit SbcD; Provisional	97.57
COG4186		186	Predicted phosphoesterase or phosphohydrolase [Gen	97.54
TIGR00583		405	mre11 DNA repair protein (mre11). All proteins in	97.53
cd00844		262	MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t	97.47
cd07400		144	MPP_YydB Bacillus subtilis YydB and related protei	97.46
cd07393		232	MPP_DR1119 Deinococcus radiodurans DR1119 and rela	97.4
COG0420		390	SbcD DNA repair exonuclease [DNA replication, reco	97.39
cd08165		156	MPP_MPPE1 human MPPE1 and related proteins, metall	97.3
COG3855		648	Fbp Uncharacterized protein conserved in bacteria	97.28
COG2908		237	Uncharacterized protein conserved in bacteria [Fun	97.25
TIGR00024		225	SbcD_rel_arch putative phosphoesterase, SbcD/Mre11	97.24
COG1409		301	Icc Predicted phosphohydrolases [General function	97.23
cd07395		262	MPP_CSTP1 Homo sapiens CSTP1 and related proteins,	97.22
cd07386		243	MPP_DNA_pol_II_small_archeal_C archeal DNA polymer	97.01
COG1408		284	Predicted phosphohydrolases [General function pred	96.92
cd07401		256	MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal	96.92
cd00845		252	MPP_UshA_N_like Escherichia coli UshA-like family,	96.87
PF14582		255	Metallophos_3: Metallophosphoesterase, calcineurin	96.77
cd08166		195	MPP_Cdc1_like_1 uncharacterized subgroup related t	96.72
cd00839		294	MPP_PAPs purple acid phosphatases of the metalloph	96.5
cd07380		150	MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re	96.38
cd07384		171	MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re	96.37
COG1407		235	Predicted ICC-like phosphoesterases [General funct	95.81
cd07410		277	MPP_CpdB_N Escherichia coli CpdB and related prote	95.76
cd08163		257	MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related	95.22
PLN02533		427	probable purple acid phosphatase	95.11
cd07408		257	MPP_SA0022_N Staphylococcus aureus SA0022 and rela	94.94
cd08164		193	MPP_Ted1 Saccharomyces cerevisiae Ted1 and related	94.83
cd07411		264	MPP_SoxB_N Thermus thermophilus SoxB and related p	94.64
cd07412		288	MPP_YhcR_N Bacillus subtilis YhcR endonuclease and	94.53
COG1768		230	Predicted phosphohydrolase [General function predi	94.38
KOG3662		410	consensus Cell division control protein/predicted	93.87
TIGR00282		266	metallophosphoesterase, MG_246/BB_0505 family. A m	93.86
cd07378		277	MPP_ACP5 Homo sapiens acid phosphatase 5 and relat	93.77
KOG3325		183	consensus Membrane coat complex Retromer, subunit	93.66
cd07406		257	MPP_CG11883_N Drosophila melanogaster CG11883 and	93.04
KOG1432		379	consensus Predicted DNA repair exonuclease SIA1 [G	92.77
cd07409		281	MPP_CD73_N CD73 ecto-5'-nucleotidase and related p	92.36
COG1311		481	HYS2 Archaeal DNA polymerase II, small subunit/DNA	92.08
PRK09419		1163	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	91.22
cd07382		255	MPP_DR1281 Deinococcus radiodurans DR1281 and rela	89.7
KOG3947		305	consensus Phosphoesterases [General function predi	88.59
cd00842		296	MPP_ASMase acid sphingomyelinase and related prote	88.58
cd07407		282	MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and	88.29
cd08162		313	MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA	87.24
cd07405		285	MPP_UshA_N Escherichia coli UshA and related prote	87.06
PRK09420		649	cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp	85.21
KOG2476		528	consensus Uncharacterized conserved protein [Funct	84.61
TIGR01390		626	CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod	84.41
COG0639		155	ApaH Diadenosine tetraphosphatase and related seri	83.96
COG0737		517	UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras	83.76
KOG2679		336	consensus Purple (tartrate-resistant) acid phospha	82.84
cd07387		257	MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2	82.65
PRK09419		1163	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	82.01
PRK11907		814	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	80.62
KOG2863		456	consensus RNA lariat debranching enzyme [RNA proce	80.05

>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain	Back alignment and domain information

Probab=100.00  E-value=2.2e-36  Score=280.12  Aligned_cols=205  Identities=45%  Similarity=0.814  Sum_probs=157.5

Q ss_pred             EEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcchh
Q 041373           61 IAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIM  140 (395)
Q Consensus        61 ~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~~  140 (395)
                      +||||||||+++|.++|+.+++.+....|..+.+++|++||+||||+++.+|+++++++...+.+.++++++|+||||.+
T Consensus         1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~   80 (208)
T cd07425           1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM   80 (208)
T ss_pred             CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence            58999999999999999999998888889999999999999999999999999999999988888899999999999999


Q ss_pred             hhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHHHHh
Q 041373          141 NIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFL  220 (395)
Q Consensus       141 ~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~L  220 (395)
                      ++.+.++|..+.....+..   +                                      .. ....+.+....+.+||
T Consensus        81 ~l~~~~~~~~~~~~~~~~~---~--------------------------------------~~-~~~~~~~~~~~~~~~L  118 (208)
T cd07425          81 NLCGDFRYVHPKYFNEFGG---L--------------------------------------AM-RRRELFSPGGELGRWL  118 (208)
T ss_pred             HHcchhccCChhHHHHHHh---h--------------------------------------hh-hHHHhcCCccHHHHHH
Confidence            9986555544321111100   0                                      00 0011112224567999


Q ss_pred             hcCceEEEeCCEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccchhhhcch--HHHHHH
Q 041373          221 SENTTVLVVGDSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDC--SALEHA  298 (395)
Q Consensus       221 ~~lP~~~~~~~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~~~~~~~--~~l~~~  298 (395)
                      +++|+++.+++++|||||+.|                                    +|.|.+........|  ..+.+.
T Consensus       119 ~~lP~~~~~~~~~fvHag~~~------------------------------------~w~r~y~~~~~~~~~~~~~~~~~  162 (208)
T cd07425         119 RSKPVIVKVNDTLFVHGGLGP------------------------------------LWYRGYSKETSDKECAAAHLDKV  162 (208)
T ss_pred             HhCCeEEEECCEEEEeCCcHH------------------------------------HHhhHhhhhhhhccchHHHHHHH
Confidence            999999999999999999733                                    244443332112222  256667


Q ss_pred             HhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcce
Q 041373          299 LATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPE  344 (395)
Q Consensus       299 L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt  344 (395)
                      |+.+ +.+++|+||||++.+....|++++|.||||++.++++|.+.
T Consensus       163 l~~~-~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~~~~~~~~~~~  207 (208)
T cd07425         163 LERL-GAKRMVVGHTPQEGGIVTFCGGKVIRIDVGMSKGVYGGPLE  207 (208)
T ss_pred             HHHc-CCCeEEEcCeeeecCceEEECCEEEEEeCCcchhhcCCCCC
Confidence            7775 78999999999997544589999999999999999988764

>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional	Back alignment and domain information

>PHA02239 putative protein phosphatase	Back alignment and domain information

>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain	Back alignment and domain information

>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain	Back alignment and domain information

>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional	Back alignment and domain information

>PRK00166 apaH diadenosine tetraphosphatase; Reviewed	Back alignment and domain information

>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	Back alignment and domain information

>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain	Back alignment and domain information

>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional	Back alignment and domain information

>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain	Back alignment and domain information

>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain	Back alignment and domain information

>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain	Back alignment and domain information

>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain	Back alignment and domain information

>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain	Back alignment and domain information

>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional	Back alignment and domain information

>PTZ00480 serine/threonine-protein phosphatase; Provisional	Back alignment and domain information

>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain	Back alignment and domain information

>PTZ00239 serine/threonine protein phosphatase 2A; Provisional	Back alignment and domain information

>cd07416 MPP_PP2B PP2B, metallophosphatase domain	Back alignment and domain information

>cd07418 MPP_PP7 PP7, metallophosphatase domain	Back alignment and domain information

>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]	Back alignment and domain information

>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]	Back alignment and domain information

>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]	Back alignment and domain information

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]	Back alignment and domain information

>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]	Back alignment and domain information

>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]	Back alignment and domain information

>PRK09453 phosphodiesterase; Provisional	Back alignment and domain information

>TIGR00040 yfcE phosphoesterase, MJ0936 family	Back alignment and domain information

>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain	Back alignment and domain information

>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily []	Back alignment and domain information

>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain	Back alignment and domain information

>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional	Back alignment and domain information

>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain	Back alignment and domain information

>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11	Back alignment and domain information

>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain	Back alignment and domain information

>COG0622 Predicted phosphoesterase [General function prediction only]	Back alignment and domain information

>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain	Back alignment and domain information

>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional	Back alignment and domain information

>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []	Back alignment and domain information

>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain	Back alignment and domain information

>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]	Back alignment and domain information

>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain	Back alignment and domain information

>PRK04036 DNA polymerase II small subunit; Validated	Back alignment and domain information

>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain	Back alignment and domain information

>PRK11340 phosphodiesterase YaeI; Provisional	Back alignment and domain information

>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain	Back alignment and domain information

>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain	Back alignment and domain information

>TIGR03729 acc_ester putative phosphoesterase	Back alignment and domain information

>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain	Back alignment and domain information

>TIGR00619 sbcd exonuclease SbcD	Back alignment and domain information

>PHA02546 47 endonuclease subunit; Provisional	Back alignment and domain information

>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain	Back alignment and domain information

>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase	Back alignment and domain information

>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain	Back alignment and domain information

>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain	Back alignment and domain information

>PRK10966 exonuclease subunit SbcD; Provisional	Back alignment and domain information

>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]	Back alignment and domain information

>TIGR00583 mre11 DNA repair protein (mre11)	Back alignment and domain information

>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain	Back alignment and domain information

>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain	Back alignment and domain information

>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]	Back alignment and domain information

>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain	Back alignment and domain information

>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related	Back alignment and domain information

>COG1409 Icc Predicted phosphohydrolases [General function prediction only]	Back alignment and domain information

>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain	Back alignment and domain information

>COG1408 Predicted phosphohydrolases [General function prediction only]	Back alignment and domain information

>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain	Back alignment and domain information

>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain	Back alignment and domain information

>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A	Back alignment and domain information

>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain	Back alignment and domain information

>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain	Back alignment and domain information

>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain	Back alignment and domain information

>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]	Back alignment and domain information

>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain	Back alignment and domain information

>PLN02533 probable purple acid phosphatase	Back alignment and domain information

>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>COG1768 Predicted phosphohydrolase [General function prediction only]	Back alignment and domain information

>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]	Back alignment and domain information

>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family	Back alignment and domain information

>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain	Back alignment and domain information

>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]	Back alignment and domain information

>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]	Back alignment and domain information

>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed	Back alignment and domain information

>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain	Back alignment and domain information

>KOG3947 consensus Phosphoesterases [General function prediction only]	Back alignment and domain information

>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>cd08162 MPP_PhoA_N Synechococcus sp	Back alignment and domain information

>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed	Back alignment and domain information

>KOG2476 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase	Back alignment and domain information

>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]	Back alignment and domain information

>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]	Back alignment and domain information

>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain	Back alignment and domain information

>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed	Back alignment and domain information

>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed	Back alignment and domain information

>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		395
1v73_A		342	Crystal Structure Of Cold-Active Protein-Tyrosine P		6e-11
2z72_A		342	New Structure Of Cold-Active Protein Tyrosine Phosp		1e-10
2zbm_A		336	Crystal Structure Of I115m Mutant Cold-Active Prote		2e-10

>pdb|1V73|A Chain A, Crystal Structure Of Cold-Active Protein-Tyrosine Phosphatase Of A Psychrophile Shewanella Sp Length = 342

Back alignment and structure

Iteration: 1

Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 77/344 (22%), Positives = 134/344 (38%), Gaps = 89/344 (25%) Query: 39 PDPKTSQNVRE--PTTRLPRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATV 96 P+ K S +++ P T L + +++A+ D+HG + L+ +I+ W G + Sbjct: 51 PETKLSSEIKQIMPDTYLG-IKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHM 109 Query: 97 VQIGDVLDRGDDXXXXXXXXXXXXREAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKE 156 V GD+ DRG ++A +GG + GNHE M + D RY + Sbjct: 110 VMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQR---- 165 Query: 157 FEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIA 216 Y I + + +P + G D I Sbjct: 166 -------YDIATTL------INRPYNKLYG------------------------ADTEIG 188 Query: 217 RRFLSENTTVLVVGDSVFVHGGLLKQHV--EYGLERINREVR-------------DWING 261 + S+N T++ + D +++HGG+ + + E L++ N R D +N Sbjct: 189 QWLRSKN-TIIKINDVLYMHGGISSEWISRELTLDKANALYRANVDASKKSLKADDLLNF 247 Query: 262 LMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCSALEHALATIPGVKRMIMGHTIQEKGINA 321 L + P + +G + F++ E + L+H V +++GHT QE+ + Sbjct: 248 LFFGNGPTWYRGYFS----ETFTEAELD---TILQHF-----NVNHIVVGHTSQER-VLG 294 Query: 322 VCDNRAIRID----VGLS------------RGCYDGLPEVLEIN 349 + N+ I +D VG S RG YDG E L+ N Sbjct: 295 LFHNKVIAVDSSIKVGKSGELLLLENNRLIRGLYDGTRETLQEN 338

PyMOL of 1v73

>pdb|2Z72|A Chain A, New Structure Of Cold-Active Protein Tyrosine Phosphatase At 1.1 Angstrom Length = 342

Back alignment and structure

>pdb|2ZBM|A Chain A, Crystal Structure Of I115m Mutant Cold-Active Protein Tyrosine Phosphatase Length = 336

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		395
2z72_A		342	Protein-tyrosine-phosphatase; cold-active enzyme,	3e-59
1g5b_A		221	Serine/threonine protein phosphatase; bacteriophag	3e-09
2dfj_A		280	Diadenosinetetraphosphatase; helices and strands m	1e-05
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-05
2qjc_A		262	Diadenosine tetraphosphatase, putative; putative d	5e-04

>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Length = 342	Back alignment and structure

 Score =  195 bits (495), Expect = 3e-59
 Identities = 62/328 (18%), Positives = 118/328 (35%), Gaps = 56/328 (17%)

Query: 36  LPNPDPKTSQNVREPTTRLPRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTAT 95
           LP     +      P T    + +++A+ D+HG  +     L+   +I+    W  G   
Sbjct: 50  LPETKLSSEIKQIMPDT-YLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGH 108

Query: 96  VVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMNIEADFRYATEMGLK 155
           +V  GD+ DRG    ++L+ + +L ++A  +GG    + GNHE M +  D RY  +    
Sbjct: 109 MVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDI 168

Query: 156 EFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPI 215
                                                         +      L      
Sbjct: 169 ATT------------------------------------------LINRPYNKLYSADTE 186

Query: 216 ARRFLSENTTVLVVGDSVFVHGGLLKQHV--EYGLERINREVRDWING----LMGKSAPG 269
             ++L    T++ + D +++HGG+  + +  E  L++ N   R  ++     L       
Sbjct: 187 IGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANALYRANVDASKKSLKADDLLN 246

Query: 270 YCKGRHAVVWLRKFSDEEKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIR 329
           +    +   W R +  E      + L+  L     V  +++GHT QE  +  +  N+ I 
Sbjct: 247 FLFFGNGPTWYRGYFSE--TFTEAELDTILQHF-NVNHIVVGHTSQE-RVLGLFHNKVIA 302

Query: 330 IDVGLSRGCYDGLPEVLEINGNSELLVL 357
           +D  +  G      E+L +  N  +  L
Sbjct: 303 VDSSIKVGKS---GELLLLENNRLIRGL 327

PyMOL of 2z72

>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 Length = 221	Back alignment and structure

>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} Length = 280	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} Length = 262	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		395
2z72_A		342	Protein-tyrosine-phosphatase; cold-active enzyme,	100.0
3icf_A		335	PPT, serine/threonine-protein phosphatase T; IRO m	100.0
3h63_A		315	Serine/threonine-protein phosphatase 5; metalloenz	99.98
2ie4_C		309	PP2A-alpha;, serine/threonine-protein phosphatase	99.97
3e7a_A		299	PP-1A, serine/threonine-protein phosphatase PP1-al	99.97
2dfj_A		280	Diadenosinetetraphosphatase; helices and strands m	99.97
1fjm_A		330	Protein serine/threonine phosphatase-1 (alpha ISO	99.97
1aui_A		521	Calcineurin, serine/threonine phosphatase 2B; hydr	99.96
1wao_1		477	Serine/threonine protein phosphatase 5; hydrolase,	99.96
3ll8_A		357	Serine/threonine-protein phosphatase 2B catalytic	99.96
2qjc_A		262	Diadenosine tetraphosphatase, putative; putative d	99.96
1g5b_A		221	Serine/threonine protein phosphatase; bacteriophag	99.93
1nnw_A		252	Hypothetical protein; structural genomics, PSI, pr	99.75
3rqz_A		246	Metallophosphoesterase; PSI-biology, midwest cente	99.73
3qfm_A		270	SAPH, putative uncharacterized protein; sandwich f	99.72
1su1_A		208	Hypothetical protein YFCE; structural genomics, ph	99.49
1s3l_A		190	Hypothetical protein MJ0936; phosphodiesterase, nu	99.36
1uf3_A		228	Hypothetical protein TT1561; metallo-dependent pho	99.31
2kkn_A		178	Uncharacterized protein; protein phosphatase 2A ho	99.29
2a22_A		215	Vacuolar protein sorting 29; alpha-beta-BETA-alpha	99.21
2yvt_A		260	Hypothetical protein AQ_1956; structural genomics,	99.16
1z2w_A		192	Vacuolar protein sorting 29; VPS29, retromer, phos	99.01
1xm7_A		195	Hypothetical protein AQ_1665; structural genomics,	98.98
3ck2_A		176	Conserved uncharacterized protein (predicted phosp	98.98
3ib7_A		330	ICC protein; metallophosphoesterase, alpha-beta fo	98.96
3d03_A		274	Phosphohydrolase; glycerophosphodiesterase, metall	98.84
3rl5_A		296	Metallophosphoesterase mpped2; alpha-beta fold, me	98.75
3av0_A		386	DNA double-strand break repair protein MRE11; DNA	98.17
1ii7_A		333	MRE11 nuclease; RAD50, DNA double-strand break rep	98.16
2q8u_A		336	Exonuclease, putative; structural genomics, joint	98.11
2nxf_A		322	Putative dimetal phosphatase; dinuclear metal cent	98.0
2xmo_A		443	LMO2642 protein; phosphodiesterase, hydrolase; 1.7	97.87
3tho_B		379	Exonuclease, putative; adenosine triphosphate, bac	97.79
3t1i_A		431	Double-strand break repair protein MRE11A; DNA rep	97.48
4fbk_A		472	DNA repair and telomere maintenance protein NBS1,	97.47
4fbw_A		417	DNA repair protein RAD32; DNA double-strand break	97.45
1ute_A		313	Protein (II purple acid phosphatase); tartrate res	97.01
2qfp_A		424	Purple acid phosphatase; binuclear, Fe-Zn, hydrola	96.6
1xzw_A		426	Purple acid phosphatase; hydrolase; HET: NAG FUC M	96.25
3qfk_A		527	Uncharacterized protein; structural genomics, cent	95.75
3tgh_A		342	Glideosome-associated protein 50; phosphatase fold	95.35
1hp1_A		516	5'-nucleotidase; metallophosphatase, dinuclear, me	95.1
2z1a_A		552	5'-nucleotidase; metal-binding, nucleotide-binding	94.92
3ztv_A		579	NAD nucleotidase, NADN; hydrolase, NAD pyrophospha	94.25
4h2g_A		546	5'-nucleotidase; dimer, hydrolase, phosphatase, ex	94.2
1t71_A		281	Phosphatase, conserved HYPO; crystal, X-RAY crysta	94.01
3ive_A		509	Nucleotidase; structural genomics, PSI-2, protein	93.51
3gve_A		341	YFKN protein; alpha-beta-BETA-alpha sandwich, stru	92.65
3jyf_A		339	2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n	92.1
2z06_A		252	Putative uncharacterized protein TTHA0625; metal b	91.82
1t70_A		255	Phosphatase; crystal, X-RAY crystallography, struc	91.71
3c9f_A		557	5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p	90.88
4h1s_A		530	5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo	86.96
2wdc_A		562	SOXB, sulfur oxidation protein SOXB; sulfur-sulfur	80.76

>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A	Back alignment and structure

Probab=100.00  E-value=1.8e-35  Score=292.32  Aligned_cols=260  Identities=21%  Similarity=0.417  Sum_probs=188.1

Q ss_pred             CCCCCCCCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeE
Q 041373           51 TTRLPRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKF  130 (395)
Q Consensus        51 ~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v  130 (395)
                      +..++..++++|||||||++++|.++|+.+++.+++..|..+.+.+||+||+||||++|.+|+++|++++.++..+|.++
T Consensus        64 ~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~~~~v  143 (342)
T 2z72_A           64 PDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMV  143 (342)
T ss_dssp             CSEECCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred             cceecCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhCCCeE
Confidence            46677889999999999999999999999999887778888888999999999999999999999999987666689999


Q ss_pred             EEeCCCcchhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhC
Q 041373          131 ITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALR  210 (395)
Q Consensus       131 ~~l~GNHE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  210 (395)
                      ++++||||.+++++.++|..+.    |.....++           +..            +.               .+.
T Consensus       144 ~~v~GNHE~~~l~~~~~~~~~~----~~~~~~~~-----------~~~------------~~---------------~l~  181 (342)
T 2z72_A          144 HLLMGNHEQMVLGGDLRYVHQR----YDIATTLI-----------NRP------------YN---------------KLY  181 (342)
T ss_dssp             EECCCHHHHHHHHTCCTTSCTT----HHHHHHHT-----------TSC------------GG---------------GGG
T ss_pred             EEEecCCcHHHhhCcccccccc----cchHHHHh-----------ccc------------HH---------------HHH
Confidence            9999999999987544443211    10000000           000            00               000


Q ss_pred             CCchHHHHHhhcCceEEEeCCEEEEecCCCCCccc--cChhhhhHHHHHHHhccc----CCCCCCCcCCCCccccccccc
Q 041373          211 PDGPIARRFLSENTTVLVVGDSVFVHGGLLKQHVE--YGLERINREVRDWINGLM----GKSAPGYCKGRHAVVWLRKFS  284 (395)
Q Consensus       211 p~~~~~~~~L~~lP~~~~~~~~lfvHAGl~p~~~~--~~le~~n~~~~~wi~~~~----~~~~p~~~~~~~~~lW~R~~~  284 (395)
                      ....++.+||+++|+++++++++|||||++|.+..  .++++++...+.++....    .......+++..++.|.|.+.
T Consensus       182 ~~~~~~~~~L~~lP~~~~~~~~~~vHgGl~p~~~~~~~~l~~i~~~~r~~~~~~~~~~~~~~~~~~lwsd~~~~w~R~~~  261 (342)
T 2z72_A          182 SADTEIGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANALYRANVDASKKSLKADDLLNFLFFGNGPTWYRGYF  261 (342)
T ss_dssp             STTBHHHHHHHTCCSEEEETTEEEESSCCCHHHHHTTCCHHHHHHHHHHHTTSCHHHHHHSHHHHHHHSTTSTTTCCGGG
T ss_pred             HHhHHHHHHHhhCCeEEEECCEEEEECCCChhhcccCCCHHHHHHHhhhhccccccccccCHHHHhccCCCCCCCcCCcc
Confidence            00124678999999999999999999999987422  367777665554431100    000001223445567888763


Q ss_pred             chhhhcchHHHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcceEEEEeCCCcEEEEecC
Q 041373          285 DEEKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLTAN  360 (395)
Q Consensus       285 ~~~~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt~L~I~~~~~~~v~~~~  360 (395)
                      ..  .+.++.++++|... +.++||+|||++.. +...+++++|+|||||++   +|++++++|++ +.+..+...
T Consensus       262 ~~--~fg~~~~~~fl~~~-~~~~IV~GHt~~~~-~~~~~~~~~i~Idsg~~~---gg~la~l~i~~-~~~~~v~~~  329 (342)
T 2z72_A          262 SE--TFTEAELDTILQHF-NVNHIVVGHTSQER-VLGLFHNKVIAVDSSIKV---GKSGELLLLEN-NRLIRGLYD  329 (342)
T ss_dssp             ST--TCCHHHHHHHHHHH-TCSEEEECSSCCSS-CEEETTTTEEECCCCGGG---SSCCCEEEEET-TEEEEECTT
T ss_pred             cc--cCChHHHHHHHHHC-CCcEEEECCCcccc-hhhhcCCCEEEEECCCCC---CCcEEEEEEEC-CEEEEEecC
Confidence            21  35567778888764 78999999999985 555678899999999998   69999999996 556555543

PyMOL of 2z72

>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}	Back alignment and structure

>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A	Back alignment and structure

>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*	Back alignment and structure

>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*	Back alignment and structure

>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}	Back alignment and structure

>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3	Back alignment and structure

>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3	Back alignment and structure

>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3	Back alignment and structure

>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A	Back alignment and structure

>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}	Back alignment and structure

>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3	Back alignment and structure

>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A	Back alignment and structure

>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0	Back alignment and structure

>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*	Back alignment and structure

>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7	Back alignment and structure

>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A	Back alignment and structure

>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6	Back alignment and structure

>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}	Back alignment and structure

>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7	Back alignment and structure

>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6	Back alignment and structure

>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A	Back alignment and structure

>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8	Back alignment and structure

>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7	Back alignment and structure

>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A	Back alignment and structure

>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A	Back alignment and structure

>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*	Back alignment and structure

>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*	Back alignment and structure

>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A	Back alignment and structure

>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A	Back alignment and structure

>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12	Back alignment and structure

>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}	Back alignment and structure

>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C	Back alignment and structure

>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}	Back alignment and structure

>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*	Back alignment and structure

>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*	Back alignment and structure

>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*	Back alignment and structure

>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*	Back alignment and structure

>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1	Back alignment and structure

>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}	Back alignment and structure

>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}	Back alignment and structure

>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A	Back alignment and structure

>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2	Back alignment and structure

>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*	Back alignment and structure

>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*	Back alignment and structure

>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9	Back alignment and structure

>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*	Back alignment and structure

>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}	Back alignment and structure

>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}	Back alignment and structure

>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A	Back alignment and structure

>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9	Back alignment and structure

>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2	Back alignment and structure

>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}	Back alignment and structure

>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		395
d1g5ba_		219	d.159.1.3 (A:) lambda ser/thr protein phosphatase	8e-08
d1nnwa_		251	d.159.1.5 (A:) Hypothetical protein PF1291 {Archae	1e-06
d1auia_		473	d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calc	3e-05
d1uf3a_		228	d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu	5e-05
d3c5wc1		288	d.159.1.3 (C:6-293) Protein phosphatase 2A catalyt	2e-04
d1su1a_		184	d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia	3e-04
d2yvta1		257	d.159.1.6 (A:4-260) Uncharacterized protein Aq_195	0.001

>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} Length = 219	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: lambda ser/thr protein phosphatase
species: Bacteriophage lambda [TaxId: 10710]

 Score = 50.2 bits (119), Expect = 8e-08
 Identities = 49/292 (16%), Positives = 77/292 (26%), Gaps = 87/292 (29%)

Query: 59  RLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEK 118
            +  +GDLHG        L   G  N  D        ++ +GD++DRG + ++ L L+  
Sbjct: 14  NIWVVGDLHGCYTNLMNKLDTIGFDNKKDL-------LISVGDLVDRGAENVECLELITF 66

Query: 119 LKREAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLE 178
                      F  + GNHE M I+          L E  +  +W   G           
Sbjct: 67  ---------PWFRAVRGNHEQMMIDG---------LSERGNVNHWLLNGG---------- 98

Query: 179 KPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGDSVFVHGG 238
                              + N    +    +     A         V      V  H  
Sbjct: 99  -----------------GWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHAD 141

Query: 239 LLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCSALEHA 298
                 E                       G       V+W R+     +          
Sbjct: 142 YPFDEYE----------------------FGKPVDHQQVIWNRERISNSQNGIVKE---- 175

Query: 299 LATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEING 350
              I G    I GHT   K    +     + ID G     + G   ++++ G
Sbjct: 176 ---IKGADTFIFGHTPAVKP---LKFANQMYIDTG---AVFCGNLTLIQVQG 218

PyMOL of d1g5ba_

>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 251	Back information, alignment and structure

>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} Length = 473	Back information, alignment and structure

>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228	Back information, alignment and structure

>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 288	Back information, alignment and structure

>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} Length = 184	Back information, alignment and structure

>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		395
d1g5ba_		219	lambda ser/thr protein phosphatase {Bacteriophage	99.98
d1s95a_		324	Serine/threonine protein phosphatase 5, PP5 {Human	99.97
d3c5wc1		288	Protein phosphatase 2A catalytic subunit alpha iso	99.97
d1jk7a_		294	Protein phosphatase-1 (PP-1) {Human (Homo sapiens)	99.97
d1auia_		473	Protein phosphatase-2B (PP-2B, calcineurin A subun	99.96
d1nnwa_		251	Hypothetical protein PF1291 {Archaeon Pyrococcus f	99.86
d1uf3a_		228	Hypothetical protein TT1561 {Thermus thermophilus	99.67
d1su1a_		184	Phosphodiesterase yfcE {Escherichia coli [TaxId: 5	99.41
d1s3la_		165	Putative phosphodiesterase MJ0936 {Methanococcus j	99.39
d2a22a1		193	Vacuolar protein sorting 29, VPS29 {Cryptosporidiu	99.17
d1z2wa1		182	Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus	99.16
d3ck2a1		173	Uncharacterized protein SP1879 {Streptococcus pneu	99.05
d2yvta1		257	Uncharacterized protein Aq_1956 {Aquifex aeolicus	99.01
d3d03a1		271	Glycerophosphodiesterase GpdQ {Enterobacter aeroge	98.52
d2hy1a1		256	Rv0805 cyclic nucleotide phosphodiesterase {Mycoba	98.37
d1ii7a_		333	Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}	98.18
d1xm7a_		188	Hypothetical protein aq_1666 {Aquifex aeolicus [Ta	97.76
d2qfra2		312	Plant purple acid phosphatase, catalytic domain {K	97.48
d2nxfa1		320	Uncharacterized C17orf48 homolog zgc:64213 {Zebraf	97.29
d1utea_		302	Mammalian purple acid phosphatase {Pig (Sus scrofa	95.99
d2z1aa2		302	5'-nucleotidase (syn. UDP-sugar hydrolase), N-term	90.21
d3c9fa2		322	5'-nucleotidase (syn. UDP-sugar hydrolase), N-term	87.74
d1usha2		337	5'-nucleotidase (syn. UDP-sugar hydrolase), N-term	85.09

>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: lambda ser/thr protein phosphatase
species: Bacteriophage lambda [TaxId: 10710]

Probab=99.98  E-value=2.3e-33  Score=256.71  Aligned_cols=205  Identities=22%  Similarity=0.347  Sum_probs=136.7

Q ss_pred             CCCCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeC
Q 041373           55 PRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMN  134 (395)
Q Consensus        55 ~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~  134 (395)
                      ...+||+||||||||+++|+++|+.+++.++.+       ++|||||+|||||+|.+|+++++..         ++++|+
T Consensus        10 ~~~~rI~vIgDIHG~~~~L~~lL~~i~~~~~~d-------~lv~lGD~vDrGp~s~~vl~~l~~~---------~~~~i~   73 (219)
T d1g5ba_          10 SKYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKD-------LLISVGDLVDRGAENVECLELITFP---------WFRAVR   73 (219)
T ss_dssp             GGCSCEEEECCCTTCHHHHHHHHHHHTCCTTTC-------EEEECSCCSSSSSCHHHHHGGGGST---------TEEECC
T ss_pred             CCCCeEEEEEecccCHHHHHHHHHHcCCCCCCC-------EEEEeCCccccCccHHHHHHHhhcc---------cccccc
Confidence            345699999999999999999999998765544       7999999999999999999987544         799999


Q ss_pred             CCcchhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCch
Q 041373          135 GNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGP  214 (395)
Q Consensus       135 GNHE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~  214 (395)
                      ||||.|+++..    ..     ......|+.+++..+..             .+.            ....+.      +
T Consensus        74 GNHE~~ll~~~----~~-----~~~~~~~~~~~~~~~~~-------------~~~------------~~~~~~------~  113 (219)
T d1g5ba_          74 GNHEQMMIDGL----SE-----RGNVNHWLLNGGGWFFN-------------LDY------------DKEILA------K  113 (219)
T ss_dssp             CHHHHHHHHHH----ST-----TCCCHHHHTTTGGGGGG-------------SCH------------HHHHHH------H
T ss_pred             CcHHHHHHHHH----hc-----cccccHHHHcCchHHhh-------------ccc------------chhHHH------H
Confidence            99999998732    11     11123444444332111             000            000111      2


Q ss_pred             HHHHHhhcCceEEEe----CCEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccchhhhc
Q 041373          215 IARRFLSENTTVLVV----GDSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKC  290 (395)
Q Consensus       215 ~~~~~L~~lP~~~~~----~~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~~~~~  290 (395)
                      ...+|+.++|.....    ..++++|||+.+.+... ...+..                     ..++|.|..+..... 
T Consensus       114 ~~~~~~~~~p~~~~~~~~~~~~~~~h~~~~~~~~~~-~~~~~~---------------------~~~lw~r~~~~~~~~-  170 (219)
T d1g5ba_         114 ALAHKADELPLIIELVSKDKKYVICHADYPFDEYEF-GKPVDH---------------------QQVIWNRERISNSQN-  170 (219)
T ss_dssp             HHHHHHTTCCSEEEEEETTEEEEECSSCCCSSBCCT-TCCCCH---------------------HHHHHCCHHHHHHHT-
T ss_pred             HHHHHHHhCccccccccCCCcEEEEECCCchhhhcc-ccccch---------------------hhhcccccccccccc-
Confidence            456789999998876    36899999986553211 111111                     234566543221000 


Q ss_pred             chHHHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcceEEEEeC
Q 041373          291 DCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEING  350 (395)
Q Consensus       291 ~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt~L~I~~  350 (395)
                            .....+.+.+.||+||||+.. + ... ++.++|||||++   +|+||||+|++
T Consensus       171 ------~~~~~~~~~~~vV~GHt~~~~-~-~~~-~~~i~IDtG~~~---gG~Ltal~l~g  218 (219)
T d1g5ba_         171 ------GIVKEIKGADTFIFGHTPAVK-P-LKF-ANQMYIDTGAVF---CGNLTLIQVQG  218 (219)
T ss_dssp             ------TCCCCCBTSSEEEECSSCCSS-C-EEE-TTEEECCCCHHH---HSCCCEEEEEC
T ss_pred             ------ccccccCCCCEEEECCcCCCC-c-EEe-CCEEEEECCcCC---CCeEEEEEeCC
Confidence                  011223467899999999985 3 233 446999999987   69999999984

PyMOL of d1g5ba_

>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]}	Back information, alignment and structure

>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]}	Back information, alignment and structure

>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]}	Back information, alignment and structure

>d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]}	Back information, alignment and structure

>d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]}	Back information, alignment and structure

>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]}	Back information, alignment and structure

>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]}	Back information, alignment and structure

>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}	Back information, alignment and structure

>d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]}	Back information, alignment and structure

>d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}	Back information, alignment and structure

>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]}	Back information, alignment and structure

>d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]}	Back information, alignment and structure

>d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]}	Back information, alignment and structure

>d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure