Citrus Sinensis ID: 041414

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
Protein Sequence
MANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSDTAPLVEKANSRRVLCLDLNLTPYENDLEFYRLGSN
Secondary Structure (PSIPRED)
cccHHHccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccHHHHHcccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHccccccccccccccccccEEEEcccccccccHHHccccccccccccccccccccccccccccccccEEccccccEcccccccccccHHccccccccccccccccccccccccccccccccEEEEcccccccccHHHHHHcccc
Coil and Loop (DISEMBL)
manclmfmphggdfdavngvNMAVADRAfecktcnrqfpsfqalgghrashkksrvtegsgggvdtqqspvkpkthecsvcglEFAIGQALgghmrrhragashaneklsafsslsdtaplvekansrrvlcldlnltpyendLEFYRLGSN
Flexible Loop (DISEMBL)
MANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSfqalgghrashkksrvtegsgggvdtqqspvkpKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSDTAPLVEKANSRRVLcldlnltpyendlefyrlgsn
Low Complexity Region (SEG)
MANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSDTAPLVEKANSRRVLCLDLNLTPYENDLEFYRLGSN
Disordered region (IsUnstruct)
***CLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQ**********************************ECSVCGLEFAIGQALGG*********************************SRRVLCLDLNLTPYENDLEFYR****
Disordered Region (DISOPRED)
MANCLMF***********************CKTCNRQFPSFQA********************************HECSVCGLEFAIGQALGGHMRR**********************************CLDLNLTPYENDLEFYRL***
Disordered Region (DISEMBL)
MANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQA*********************************ECSVCGLEFAIGQAL****************KLSAFSSLSDTAPLVEKANSRRVLCLDLNLTPYENDLEFYRLGSN
Disordered Region (DISPRO)
MANCLMFMPHG**************DRAFECKTCNRQFPSFQAL******************************THECSVCGLEFAIGQAL************************************RRVLCLDLNLTPYENDLEFYR****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSDTAPLVEKANSRRVLCLDLNLTPYENDLEFYRLGSN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	152	2.2.26 [Sep-21-2011]
Q9SLD4	178	Zinc finger protein ZAT11	no	no	0.881	0.752	0.424	7e-26
Q42410	162	Zinc finger protein ZAT12	no	no	0.875	0.820	0.461	7e-23
Q681X4	286	Zinc finger protein ZAT5	no	no	0.947	0.503	0.370	8e-21
Q9LX85	164	Zinc finger protein ZAT8	no	no	0.835	0.774	0.435	7e-20
Q42453	168	Zinc finger protein ZAT7	no	no	0.875	0.791	0.418	8e-20
Q9SSW0	193	Zinc finger protein AZF3	no	no	0.638	0.502	0.436	6e-15
Q9M202	288	Zinc finger protein ZAT9	no	no	0.756	0.399	0.389	8e-15
Q39092	267	Zinc finger protein ZAT1	no	no	0.473	0.269	0.5	9e-13
Q9SHD0	314	Zinc finger protein ZAT4	no	no	0.717	0.347	0.398	1e-12
Q96289	227	Zinc finger protein ZAT10	no	no	0.743	0.497	0.365	7e-12

>sp|Q9SLD4|ZAT11_ARATH Zinc finger protein ZAT11 OS=Arabidopsis thaliana GN=ZAT11 PE=2 SV=1

 Score =  115 bits (289), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 92/158 (58%), Gaps = 24/158 (15%)

Query: 1   MANCLMFMPHGGDFDAVNGVNMAVADRA---FECKTCNRQFPSFQALGGHRASHKKSRVT 57
           +A CLM +        + G+N          FECKTCN++F SFQALGGHRASHKK ++T
Sbjct: 17  IAKCLMILAQTSMVKQI-GLNQHTESHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLT 75

Query: 58  EGSGGGVDTQQSPVKPKT--------HECSVCGLEFAIGQALGGHMRRHRAGASHANEKL 109
                    +Q  VK  +        H+CS+C   F  GQALGGHMRRHR+  +    + 
Sbjct: 76  --------VEQKDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHRSSMT---VEP 124

Query: 110 SAFSSLSDTAPLVEK-ANSRRVLCLDLNLTPYENDLEF 146
           S  S +  + P++++  +S+R+L LDLNLTP ENDLE+
Sbjct: 125 SFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEY 162

Probable transcription factor that may be involved in stress responses.
Arabidopsis thaliana (taxid: 3702)

>sp|Q42410|ZAT12_ARATH Zinc finger protein ZAT12 OS=Arabidopsis thaliana GN=ZAT12 PE=2 SV=1

 Score =  106 bits (264), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 85/143 (59%), Gaps = 10/143 (6%)

Query: 2   ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG 61
           ANCLM +   G  + V+G +     R F CKTC +QF SFQALGGHRASHKK      S 
Sbjct: 16  ANCLMLLSRVGQ-ENVDGGDQ---KRVFTCKTCLKQFHSFQALGGHRASHKKPNNDALSS 71

Query: 62  GGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSD-TAP 120
           G        VK  +H C +CG+EF +GQALGGHMRRHR  +  A   L   + L + T  
Sbjct: 72  G----LMKKVKTSSHPCPICGVEFPMGQALGGHMRRHRNESGAAGGALVTRALLPEPTVT 127

Query: 121 LVEKANS-RRVLCLDLNLTPYEN 142
            ++K++S +RV CLDL+L   +N
Sbjct: 128 TLKKSSSGKRVACLDLSLGMVDN 150

Transcriptional repressor involved in light acclimation, cold and oxidative stress responses. May regulate a collection of transcripts involved in response to high-light, cold and oxidative stress.

Arabidopsis thaliana (taxid: 3702)

>sp|Q681X4|ZAT5_ARATH Zinc finger protein ZAT5 OS=Arabidopsis thaliana GN=ZAT5 PE=2 SV=1

 Score = 99.4 bits (246), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 89/189 (47%), Gaps = 45/189 (23%)

Query: 1   MANCLMFMPHGG-----DFDAVNGVNMAVADR-----AFECKTCNRQFPSFQALGGHRAS 50
           MA CL+ +  G      D      ++  ++        +ECKTCNR F SFQALGGHRAS
Sbjct: 77  MAICLIMLARGTVLPSPDLKNSRKIHQKISSENSSFYVYECKTCNRTFSSFQALGGHRAS 136

Query: 51  HKKSRVT------------------EG-------SGGGVDTQQSPV---KPKTHECSVCG 82
           HKK R +                  EG       SG  + +Q S +     K HECS+CG
Sbjct: 137 HKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALASQASNIINKANKVHECSICG 196

Query: 83  LEFAIGQALGGHMRRHRAGASHANE-KLSAFSSLSDTAPLVE------KANSRRVLCLDL 135
            EF  GQALGGHMRRHR   +  +    +A  S + T   +E          R+ L LDL
Sbjct: 197 SEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTEEEIEINIGRSMEQQRKYLPLDL 256

Query: 136 NLTPYENDL 144
           NL   E+DL
Sbjct: 257 NLPAPEDDL 265

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LX85|ZAT8_ARATH Zinc finger protein ZAT8 OS=Arabidopsis thaliana GN=ZAT8 PE=2 SV=1

 Score = 95.9 bits (237), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 79/140 (56%), Gaps = 13/140 (9%)

Query: 2   ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG 61
           A CLM +   G+             R F CKTC ++F SFQALGGHRASHKK  +   S 
Sbjct: 16  AKCLMLLSRVGECGG------GGEKRVFRCKTCLKEFSSFQALGGHRASHKK--LINSSD 67

Query: 62  GGVDTQQSPVKPKT---HECSVCGLEFAIGQALGGHMRRHRA-GASHANEKLSAFSSLSD 117
             +    S  K KT   H C +CG+EF +GQALGGHMRRHR+  AS       +F   + 
Sbjct: 68  PSLLGSLSNKKTKTATSHPCPICGVEFPMGQALGGHMRRHRSEKASPGTLVTRSFLPETT 127

Query: 118 TAPLVEKANS-RRVLCLDLN 136
           T   ++K++S +RV CLDL+
Sbjct: 128 TVTTLKKSSSGKRVACLDLD 147

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q42453|ZAT7_ARATH Zinc finger protein ZAT7 OS=Arabidopsis thaliana GN=ZAT7 PE=2 SV=1

 Score = 95.9 bits (237), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 87/153 (56%), Gaps = 20/153 (13%)

Query: 2   ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG 61
           A CLM +   G+     G +    +R F CKTC ++F SFQALGGHRASHKK  +     
Sbjct: 17  AKCLMLLSRVGECGGGCGGD----ERVFRCKTCLKEFSSFQALGGHRASHKK--LINSDN 70

Query: 62  GGVDTQQSPVKPKT-HECSVCGLEFAIGQALGGHMRRHRAGASHANEKLS------AFSS 114
             +    S  K KT H C +CG++F +GQALGGHMRRHR      NEK+S      +F  
Sbjct: 71  PSLLGSLSNKKTKTSHPCPICGVKFPMGQALGGHMRRHR------NEKVSGSLVTRSFLP 124

Query: 115 LSDTAPLVEKANS-RRVLCLDLNLTPYENDLEF 146
            + T   ++K +S +RV CLDL+L   E+ + +
Sbjct: 125 ETTTVTALKKFSSGKRVACLDLDLDSMESLVNW 157

Probable transcription factor involved in oxidative stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW0|AZF3_ARATH Zinc finger protein AZF3 OS=Arabidopsis thaliana GN=AZF3 PE=1 SV=1

 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 13/110 (11%)

Query: 1   MANCLMFMPH-GGDFDAVNGVNMAVADR-AFECKTCNRQFPSFQALGGHRASHKKSRVTE 58
           +A CLM +   GGD D+V      VA++ +++C  C + F S+QALGGH+ASH+      
Sbjct: 50  LAFCLMLLARDGGDLDSVT-----VAEKPSYKCGVCYKTFSSYQALGGHKASHRSLY--- 101

Query: 59  GSGGGVDTQQSP-VKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANE 107
             GGG + + +P    K+H CSVCG  FA GQALGGH R H  G    +E
Sbjct: 102 --GGGENDKSTPSTAVKSHVCSVCGKSFATGQALGGHKRCHYDGGVSNSE 149

Transcriptional repressor probably involved in abiotic stress responses. Binds DNA in a sequence-specific manner and can repress the transactivation activity of other transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M202|ZAT9_ARATH Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1

 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 65/131 (49%), Gaps = 16/131 (12%)

Query: 18  NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRV----TEGSGGGVDTQQSPVKP 73
           N +N A     ++C+TC + F S+QALGGHRASHKK+RV    TE            V  
Sbjct: 162 NKINRATTKGRYKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAK 221

Query: 74  KTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSDTAPLVEKANSRRVLCL 133
           + HEC +C   FA GQALGGH R H  G    N++             V +  S +   +
Sbjct: 222 RIHECPICLRVFASGQALGGHKRSHGVGNLSVNQQRR-----------VHRNESVKQRMI 270

Query: 134 DLNL-TPYEND 143
           DLNL  P E D
Sbjct: 271 DLNLPAPTEED 281

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39092|ZAT1_ARATH Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 4/76 (5%)

Query: 26  DRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKT---HECSVCG 82
           ++ FEC+TC + F S+QALGGHRASHKK ++ E    G D  +   K  T   HEC +C 
Sbjct: 157 NKWFECETCEKVFKSYQALGGHRASHKK-KIAETDQLGSDELKKKKKKSTSSHHECPICA 215

Query: 83  LEFAIGQALGGHMRRH 98
             F  GQALGGH R H
Sbjct: 216 KVFTSGQALGGHKRSH 231

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SHD0|ZAT4_ARATH Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 9/118 (7%)

Query: 29  FECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQ--SPVKPKTHECSVCGLEFA 86
           F+C+TC + F S+QALGGHRASHKK++        V+T+      + K HEC +C   F 
Sbjct: 194 FKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKEKKVHECPICFRVFT 253

Query: 87  IGQALGGHMRRHRAGASHANEKLSAFSSLSDTAPLVEKANSRRVLCLDLNL-TPYEND 143
            GQALGGH R H +    A   L    S+S    + E+ + ++ + +DLNL  P E D
Sbjct: 254 SGQALGGHKRSHGSNIG-AGRGL----SVSQIVQIEEEVSVKQRM-IDLNLPAPNEED 305

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q96289|ZAT10_ARATH Zinc finger protein ZAT10 OS=Arabidopsis thaliana GN=ZAT10 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 13/126 (10%)

Query: 23  AVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKP--------- 73
           AV   +++C  C++ F S+QALGGH+ASH+K+     SGGG D   S             
Sbjct: 74  AVEKLSYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHSTSSATTTSAVTTGSG 133

Query: 74  KTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSDTAPLVEKANSRRVLCL 133
           K+H C++C   F  GQALGGH R H  G ++ N   S+ S+          ++S R    
Sbjct: 134 KSHVCTICNKSFPSGQALGGHKRCHYEGNNNIN--TSSVSNSEGAGSTSHVSSSHR--GF 189

Query: 134 DLNLTP 139
           DLN+ P
Sbjct: 190 DLNIPP 195

Transcriptional repressor involved in abiotic stress responses. Can repress the stress responsive genes DREB1A and LTI78. Probably involved in jasmonate (JA) early signaling response. May regulate the expression of the JA biosynthesis gene LOX3 and control the expression of TIFY10A/JAZ1, a key repressor in the JA signaling cascade.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
255575128	190	nucleic acid binding protein, putative [	0.986	0.789	0.596	3e-50
224112835	179	predicted protein [Populus trichocarpa]	0.980	0.832	0.607	3e-45
225449611	176	PREDICTED: zinc finger protein ZAT12-lik	0.934	0.806	0.644	3e-45
224098312	177	predicted protein [Populus trichocarpa]	0.967	0.830	0.583	3e-44
356568969	175	PREDICTED: zinc finger protein ZAT11-lik	0.980	0.851	0.580	6e-42
351723355	180	uncharacterized protein LOC100500371 [Gl	0.986	0.833	0.566	2e-41
388506426	180	unknown [Lotus japonicus]	0.960	0.811	0.552	2e-38
388502156	180	unknown [Lotus japonicus]	0.980	0.827	0.55	3e-38
373839318	178	Cys2/His2-type zinc finger protein [Chry	0.914	0.780	0.577	2e-37
170522968	165	putative cold-inducible protein [Camelli	0.894	0.824	0.549	2e-37

>gi|255575128|ref|XP_002528469.1| nucleic acid binding protein, putative [Ricinus communis] gi|223532145|gb|EEF33952.1| nucleic acid binding protein, putative [Ricinus communis]

 Score =  202 bits (515), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 99/166 (59%), Positives = 120/166 (72%), Gaps = 16/166 (9%)

Query: 1   MANCLMFMPHGGD------FDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKS 54
           MANCLM +  G +      F+A+ G N+  ++R FECKTCNRQFPSFQALGGHRASHKK 
Sbjct: 15  MANCLMLLSQGREIVSFPSFEAMKGTNINSSNRVFECKTCNRQFPSFQALGGHRASHKKP 74

Query: 55  RVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRA----------GASH 104
           R+T G  G ++TQ SP KPKTHECS+CGLEFAIGQALGGHMRRHRA           +  
Sbjct: 75  RLTNGDVGSLETQSSPAKPKTHECSICGLEFAIGQALGGHMRRHRAINNDSSSLSTPSPT 134

Query: 105 ANEKLSAFSSLSDTAPLVEKANSRRVLCLDLNLTPYENDLEFYRLG 150
           ++ +L A        P+++K+NSRRVLCLDLNLTPYEND+E +RLG
Sbjct: 135 SSAELMAVKPAGVAPPVMKKSNSRRVLCLDLNLTPYENDVELFRLG 180

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112835|ref|XP_002316305.1| predicted protein [Populus trichocarpa] gi|222865345|gb|EEF02476.1| predicted protein [Populus trichocarpa] gi|355477194|gb|AES12473.1| C2H2-type zinc finger protein 1 [Populus trichocarpa]

 Score =  186 bits (472), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 96/158 (60%), Positives = 117/158 (74%), Gaps = 9/158 (5%)

Query: 1   MANCLMFMPHGGDFDAVNGVNMAVAD----RAFECKTCNRQFPSFQALGGHRASHKKSRV 56
           MANCLMF+  G +  +    + A+++    R FECKTCNRQFPSFQALGGHRASHKK R+
Sbjct: 15  MANCLMFLSKGRESYSFPSFDHAMSNISPARVFECKTCNRQFPSFQALGGHRASHKKPRL 74

Query: 57  TEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANE--KLSAFSS 114
             G G      QSP KPKTHECS+CGLEFAIGQALGGHMRRHRA  +  N+   L+  S+
Sbjct: 75  MGGEGSF--ETQSPAKPKTHECSICGLEFAIGQALGGHMRRHRAALNDRNQVDPLNPPST 132

Query: 115 LSDTA-PLVEKANSRRVLCLDLNLTPYENDLEFYRLGS 151
               A P+V+++NSRRVLCLDLNLTPYEND+E ++LG+
Sbjct: 133 DDQKAVPVVKRSNSRRVLCLDLNLTPYENDMELFKLGT 170

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449611|ref|XP_002284111.1| PREDICTED: zinc finger protein ZAT12-like [Vitis vinifera]

 Score =  186 bits (472), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/152 (64%), Positives = 112/152 (73%), Gaps = 10/152 (6%)

Query: 1   MANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS 60
           +ANCLM +  G D+D++      V  R FECKTCNRQFPSFQALGGHRASHKK R+   +
Sbjct: 16  IANCLMLLSRGTDYDSI----ARVPSRVFECKTCNRQFPSFQALGGHRASHKKPRLMALN 71

Query: 61  GGG-VDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSDT- 118
           G      Q SP+KPKTHECS+CGLEFAIGQALGGHMRRHRA AS A + LS  +S S   
Sbjct: 72  GDDPAQLQSSPLKPKTHECSICGLEFAIGQALGGHMRRHRAAASGATQALSETTSSSSPP 131

Query: 119 ---APLVEKANSRRVLCLDLNLTPYEN-DLEF 146
              APL++K NSRRVLCLDLNLTP EN DL+F
Sbjct: 132 PPQAPLLKKPNSRRVLCLDLNLTPLENIDLQF 163

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098312|ref|XP_002311150.1| predicted protein [Populus trichocarpa] gi|222850970|gb|EEE88517.1| predicted protein [Populus trichocarpa]

 Score =  182 bits (463), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 94/161 (58%), Positives = 112/161 (69%), Gaps = 14/161 (8%)

Query: 1   MANCLMFMPHGGD------FDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKS 54
           MANCL+F+  G +      FD  + +N     R FECKTCNR+FPSFQALGGHRASHKK 
Sbjct: 15  MANCLVFLSKGRESYSFPSFD--HAINNNSPSRVFECKTCNRKFPSFQALGGHRASHKKP 72

Query: 55  RVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSS 114
           ++  G G      QSP KPKTHECS+CGLEFAIGQALGGHMRRHRA  +  N+     S 
Sbjct: 73  KLMGGEGSF--ESQSPAKPKTHECSICGLEFAIGQALGGHMRRHRAALNDQNQLADPLSP 130

Query: 115 LS----DTAPLVEKANSRRVLCLDLNLTPYENDLEFYRLGS 151
            S       P+V+K+NSRRVLCLDLNLTP END+E ++LG+
Sbjct: 131 PSSDHKQVVPVVKKSNSRRVLCLDLNLTPNENDMELFKLGN 171

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568969|ref|XP_003552680.1| PREDICTED: zinc finger protein ZAT11-like [Glycine max]

 Score =  175 bits (443), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 90/155 (58%), Positives = 110/155 (70%), Gaps = 6/155 (3%)

Query: 1   MANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS 60
           MANCLM +  G +F+A    + ++++R FECKTCNRQFPSFQALGGHRASHKK R+  G 
Sbjct: 12  MANCLMLLSRGSEFEATYS-STSMSNRVFECKTCNRQFPSFQALGGHRASHKKPRLMAGD 70

Query: 61  GGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN-----EKLSAFSSL 115
             G     SP KPKTHECS+CGLEFAIGQALGGHMRRHRA   + N        S+    
Sbjct: 71  IEGQLLHDSPPKPKTHECSICGLEFAIGQALGGHMRRHRAANLNGNVHNSTATSSSSGGS 130

Query: 116 SDTAPLVEKANSRRVLCLDLNLTPYENDLEFYRLG 150
           S  +   +KA+++RVL LDLNLTP+ENDLEF ++G
Sbjct: 131 SFDSSPKKKADNKRVLVLDLNLTPFENDLEFLKIG 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723355|ref|NP_001237020.1| uncharacterized protein LOC100500371 [Glycine max] gi|255630149|gb|ACU15428.1| unknown [Glycine max]

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/159 (56%), Positives = 112/159 (70%), Gaps = 9/159 (5%)

Query: 1   MANCLMFMPHGGD-FDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG 59
           MANCLM +  GGD F+A    + ++ +R FECKTCNRQFPSFQ LGGHRASHKK R+  G
Sbjct: 12  MANCLMLLSRGGDQFEATYSSSTSMNNRVFECKTCNRQFPSFQTLGGHRASHKKPRLMAG 71

Query: 60  SG-GGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSDT 118
               G     SP KPKTHECS+CGLEFAIGQALGGHMRRHRA   + N   ++ ++ S +
Sbjct: 72  DNIEGQLLHDSPPKPKTHECSICGLEFAIGQALGGHMRRHRAANLNGNNVYNSATATSSS 131

Query: 119 APLV-------EKANSRRVLCLDLNLTPYENDLEFYRLG 150
           +          +KA+++RVL LDLNLTP+ENDLEF ++G
Sbjct: 132 SGGSSFDSSPKKKADNKRVLVLDLNLTPFENDLEFLKIG 170

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506426|gb|AFK41279.1| unknown [Lotus japonicus]

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/163 (55%), Positives = 105/163 (64%), Gaps = 17/163 (10%)

Query: 1   MANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS 60
           MANCLM +  GG+F+     +     R FECKTCNRQF SFQALGGHRASHKK R+  G+
Sbjct: 12  MANCLMLLSQGGEFETTT-TSTYSPSRVFECKTCNRQFSSFQALGGHRASHKKPRLMAGN 70

Query: 61  GGGVDTQ-----QSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSL 115
           G   DT+      SP KPKTHECS+CGLEFAIGQALGGHMRRHRA     N   S+ +  
Sbjct: 71  G---DTELLHGSSSPPKPKTHECSICGLEFAIGQALGGHMRRHRAENLSGNMMQSSTTMS 127

Query: 116 SDTAPL--------VEKANSRRVLCLDLNLTPYENDLEFYRLG 150
             +           V KA  + VL LDLNLTP+ENDLEF ++G
Sbjct: 128 CSSGGSSLDSSPKNVMKAYKKIVLALDLNLTPFENDLEFLKIG 170

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502156|gb|AFK39144.1| unknown [Lotus japonicus]

 Score =  163 bits (412), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/160 (55%), Positives = 103/160 (64%), Gaps = 11/160 (6%)

Query: 1   MANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS 60
           MANCLM +  GG+F+     +     R FECKTCNRQF SFQALGGHRASHKK R+  G+
Sbjct: 12  MANCLMLLSQGGEFETTT-TSTYSPSRVFECKTCNRQFSSFQALGGHRASHKKPRLMAGN 70

Query: 61  GGG--VDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSDT 118
           G    +    SP KPKTHECS+CGLEFAIGQALGGHMRRHRA     N   S+ +    +
Sbjct: 71  GDMELLHGSSSPPKPKTHECSICGLEFAIGQALGGHMRRHRAENLSGNMMQSSTTISCSS 130

Query: 119 APL--------VEKANSRRVLCLDLNLTPYENDLEFYRLG 150
                      V KA  + VL LDLNLTP+ENDLEF ++G
Sbjct: 131 GGSSLDSSPKNVMKAYKKIVLALDLNLTPFENDLEFLKIG 170

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|373839318|gb|AEY76110.1| Cys2/His2-type zinc finger protein [Chrysanthemum x morifolium]

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/149 (57%), Positives = 103/149 (69%), Gaps = 10/149 (6%)

Query: 1   MANCLMFMPHGG-DFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG 59
           MAN LM +  G  + D+    +++   R FECKTCNRQFPSFQALGGHRASHKK R+ +G
Sbjct: 21  MANYLMLLSRGNTNMDSYQDDSVS---RVFECKTCNRQFPSFQALGGHRASHKKPRLVDG 77

Query: 60  --SGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSD 117
             +    DT    +KPKTH+CS+CG+EFAIGQALGGHMRRHRA  +  N    A   L  
Sbjct: 78  DMTSHHHDTALL-IKPKTHKCSICGVEFAIGQALGGHMRRHRAATTTENH---ASLPLDL 133

Query: 118 TAPLVEKANSRRVLCLDLNLTPYENDLEF 146
           + P+V+K NSRRV  LDLNLTP END EF
Sbjct: 134 STPVVKKVNSRRVFSLDLNLTPLENDFEF 162

Source: Chrysanthemum x morifolium

Species: Chrysanthemum x morifolium

Genus: Chrysanthemum

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|170522968|gb|ACB20696.1| putative cold-inducible protein [Camellia sinensis]

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 84/153 (54%), Positives = 101/153 (66%), Gaps = 17/153 (11%)

Query: 1   MANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS 60
           MANCLM +   G+  +  G      DR F CKTCNR+F SFQALGGHRASHKK R+  G 
Sbjct: 20  MANCLMLLSRVGETTSTKG-----RDRVFTCKTCNREFSSFQALGGHRASHKKLRLMGGG 74

Query: 61  GGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSDTAP 120
              V T  SPVK KTHECS+CGLEFA+GQALGGHMRRHR  +S         S+     P
Sbjct: 75  DLHVQTPSSPVKGKTHECSICGLEFAMGQALGGHMRRHRDSSSP--------STAQAVIP 126

Query: 121 LVEKAN----SRRVLCLDLNLTPYENDLEFYRL 149
           +++K+N    S+RVL LDLNLTPYEN ++  +L
Sbjct: 127 VLKKSNSSNGSKRVLSLDLNLTPYENHMKIKKL 159

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
TAIR|locus:2054548	156	AT2G28710 "AT2G28710" [Arabido	0.907	0.884	0.483	3e-30
TAIR|locus:2049811	178	ZAT11 "AT2G37430" [Arabidopsis	0.934	0.797	0.433	6.6e-26
TAIR|locus:2168073	162	RHL41 "AT5G59820" [Arabidopsis	0.875	0.820	0.454	1.6e-24
TAIR|locus:2142674	292	AT5G03510 "AT5G03510" [Arabido	0.526	0.273	0.421	2.7e-23
TAIR|locus:2084046	175	AT3G53600 "AT3G53600" [Arabido	0.697	0.605	0.495	3.4e-22
TAIR|locus:2075291	168	ZAT7 "AT3G46090" [Arabidopsis	0.888	0.803	0.419	9e-22
TAIR|locus:2075261	170	AT3G46070 "AT3G46070" [Arabido	0.861	0.770	0.421	1.1e-21
TAIR|locus:2046153	286	AT2G28200 "AT2G28200" [Arabido	0.559	0.297	0.421	1.3e-21
TAIR|locus:2075865	398	AT3G10470 "AT3G10470" [Arabido	0.269	0.103	0.585	1.4e-21
TAIR|locus:2075276	164	AT3G46080 "AT3G46080" [Arabido	0.835	0.774	0.442	3e-21

TAIR|locus:2054548 AT2G28710 "AT2G28710" [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 73/151 (48%), Positives = 89/151 (58%)

Query:     1 MANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS 60
             MANCL+ +      D  +        R F CKTCN++FPSFQALGGHRASH++S   EG 
Sbjct:    14 MANCLILLSKAHQNDTKS--------RVFACKTCNKEFPSFQALGGHRASHRRSAALEGH 65

Query:    61 GGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSDTAP 120
                       VKP  HEC +CG EFA+GQALGGHMR+HR G+     +  A ++   T  
Sbjct:    66 A---PPSPKRVKPVKHECPICGAEFAVGQALGGHMRKHRGGSGGGGGRSLAPATAPVTMK 122

Query:   121 LVEKANSRRVLCLDLNLTPYEN-DLEFYRLG 150
                  N +RVLCLDLNLTP EN DL+   LG
Sbjct:   123 KSGGGNGKRVLCLDLNLTPLENEDLKL-ELG 152

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2049811 ZAT11 "AT2G37430" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 65/150 (43%), Positives = 86/150 (57%)

Query:     1 MANCLMFMPHGGDFDAVNGVNMAVADRA---FECKTCNRQFPSFQALGGHRASHKKSRVT 57
             +A CLM +        + G+N          FECKTCN++F SFQALGGHRASHKK ++T
Sbjct:    17 IAKCLMILAQTSMVKQI-GLNQHTESHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLT 75

Query:    58 EGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSD 117
                               H+CS+C   F  GQALGGHMRRHR   S    + S  S +  
Sbjct:    76 VEQKDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHR---SSMTVEPSFISPMIP 132

Query:   118 TAPLVEKA-NSRRVLCLDLNLTPYENDLEF 146
             + P++++  +S+R+L LDLNLTP ENDLE+
Sbjct:   133 SMPVLKRCGSSKRILSLDLNLTPLENDLEY 162

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2168073 RHL41 "AT5G59820" [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 65/143 (45%), Positives = 86/143 (60%)

Query:     2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG 61
             ANCLM +   G  + V+G +     R F CKTC +QF SFQALGGHRASHKK    +   
Sbjct:    16 ANCLMLLSRVGQ-ENVDGGDQK---RVFTCKTCLKQFHSFQALGGHRASHKKPN-NDALS 70

Query:    62 GGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSD-TAP 120
              G+      VK  +H C +CG+EF +GQALGGHMRRHR  +  A   L   + L + T  
Sbjct:    71 SGL---MKKVKTSSHPCPICGVEFPMGQALGGHMRRHRNESGAAGGALVTRALLPEPTVT 127

Query:   121 LVEKANS-RRVLCLDLNLTPYEN 142
              ++K++S +RV CLDL+L   +N
Sbjct:   128 TLKKSSSGKRVACLDLSLGMVDN 150

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009643 "photosynthetic acclimation" evidence=IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009409 "response to cold" evidence=IEP

GO:0009631 "cold acclimation" evidence=IMP

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0006979 "response to oxidative stress" evidence=IEP;RCA;IMP

GO:0009408 "response to heat" evidence=IEP;IMP

GO:0009416 "response to light stimulus" evidence=IMP

GO:0009611 "response to wounding" evidence=IEP;RCA;IMP

GO:0042538 "hyperosmotic salinity response" evidence=IEP;RCA;IMP

GO:0010224 "response to UV-B" evidence=IEP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2142674 AT5G03510 "AT5G03510" [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
 Identities = 35/83 (42%), Positives = 48/83 (57%)

Query:    64 VDTQQSPVKP-KTHECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSDTAPL- 121
             V +     KP KTHECS+C  EF+ GQALGGHMRRHR    +AN   +  +++S ++   
Sbjct:   179 VTSSDGSKKPEKTHECSICKAEFSSGQALGGHMRRHRGLTINANATSAIKTAISSSSHHH 238

Query:   122 -VEKANSRRVLCLDLNLTPYEND 143
               E    +  L LDLNL   E++
Sbjct:   239 HEESIRPKNFLQLDLNLPAPEDE 261

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2084046 AT3G53600 "AT3G53600" [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 59/119 (49%), Positives = 76/119 (63%)

Query:    29 FECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKT---HECSVCGLEF 85
             FECKTCNR+F SFQALGGHRASHKK ++       VD +Q   + K    H+C++C   F
Sbjct:    49 FECKTCNRKFDSFQALGGHRASHKKPKLI------VDQEQVKHRNKENDMHKCTICDQMF 102

Query:    86 AIGQALGGHMRRHRAGASHANEKLSAFSSLSDTAPLVEKANSRRVLCLDLNLTPYENDL 144
               GQALGGHMR+HR   S   E+ S   S+  + P+  + +S + + LDLNLTP ENDL
Sbjct:   103 GTGQALGGHMRKHRT--SMITEQ-SIVPSVVYSRPVFNRCSSSKEI-LDLNLTPLENDL 157

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2075291 ZAT7 "AT3G46090" [Arabidopsis thaliana (taxid:3702)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 60/143 (41%), Positives = 81/143 (56%)

Query:     2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG 61
             A CLM +   G+     G +    +R F CKTC ++F SFQALGGHRASHKK  +     
Sbjct:    17 AKCLMLLSRVGECGGGCGGD----ERVFRCKTCLKEFSSFQALGGHRASHKK--LINSDN 70

Query:    62 GGVDTQQSPVKPKT-HECSVCGLEFAIGQALGGHMRRHRAGASHANEKLSAFSSLSDTAP 120
               +    S  K KT H C +CG++F +GQALGGHMRRHR      +    +F   + T  
Sbjct:    71 PSLLGSLSNKKTKTSHPCPICGVKFPMGQALGGHMRRHRNEKVSGSLVTRSFLPETTTVT 130

Query:   121 LVEKANS-RRVLCLDLNLTPYEN 142
              ++K +S +RV CLDL+L   E+
Sbjct:   131 ALKKFSSGKRVACLDLDLDSMES 153

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0045926 "negative regulation of growth" evidence=IGI

GO:0010200 "response to chitin" evidence=IEP

TAIR|locus:2075261 AT3G46070 "AT3G46070" [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 64/152 (42%), Positives = 84/152 (55%)

Query:     2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG 61
             A+CLM +   G+ D           R F CKTC R F SFQALGGHRASH  S++T    
Sbjct:    16 ASCLMLLSGIGEHDGRK-------KRVFRCKTCERDFDSFQALGGHRASH--SKLTNSDD 66

Query:    62 GGVDTQQSPVKPKT------HECSVCGLEFAIGQALGGHMRRHRAGASH--ANEKLSAFS 113
               +       KPKT      H C +CGLEF +GQALGGHMR+HR       A+  L   S
Sbjct:    67 KSLPGSPKK-KPKTTTTTTAHTCPICGLEFPMGQALGGHMRKHRNEKEREKASNVLVTHS 125

Query:   114 SLSDTAPL--VEKANS-RRVLCLDLNLTPYEN 142
              + +T  +  ++K++S +RV CLD +LT  E+
Sbjct:   126 FMPETTTVTTLKKSSSGKRVACLDFDLTSVES 157

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2046153 AT2G28200 "AT2G28200" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
 Identities = 40/95 (42%), Positives = 51/95 (53%)

Query:    60 SGGGVDTQQSPV--KP-KTHECSVCGLEFAIGQALGGHMRRHRAGASHANE-KLSAFSSL 115
             SG  + +Q S +  K  K HECS+CG EF  GQALGGHMRRHR   +  +    +A  S 
Sbjct:   171 SGSALASQASNIINKANKVHECSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSR 230

Query:   116 SDTAPLVE------KANSRRVLCLDLNLTPYENDL 144
             + T   +E          R+ L LDLNL   E+DL
Sbjct:   231 NSTEEEIEINIGRSMEQQRKYLPLDLNLPAPEDDL 265

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2075865 AT3G10470 "AT3G10470" [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
 Identities = 24/41 (58%), Positives = 30/41 (73%)

Query:    29 FECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQS 69
             ++CKTC+R FPSFQALGGHRASHKK +   G     D ++S
Sbjct:   182 YQCKTCDRTFPSFQALGGHRASHKKPKAAMGLHSNHDHKKS 222

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009555 "pollen development" evidence=IMP

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2075276 AT3G46080 "AT3G46080" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 62/140 (44%), Positives = 80/140 (57%)

Query:     2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG 61
             A CLM +   G+     G       R F CKTC ++F SFQALGGHRASHKK  +   S 
Sbjct:    16 AKCLMLLSRVGECGG-GGEK-----RVFRCKTCLKEFSSFQALGGHRASHKK--LINSSD 67

Query:    62 GGVDTQQSPVKPKT---HECSVCGLEFAIGQALGGHMRRHRAG-ASHANEKLSAFSSLSD 117
               +    S  K KT   H C +CG+EF +GQALGGHMRRHR+  AS       +F   + 
Sbjct:    68 PSLLGSLSNKKTKTATSHPCPICGVEFPMGQALGGHMRRHRSEKASPGTLVTRSFLPETT 127

Query:   118 TAPLVEKANS-RRVLCLDLN 136
             T   ++K++S +RV CLDL+
Sbjct:   128 TVTTLKKSSSGKRVACLDLD 147

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010200 "response to chitin" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	152
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	2e-06
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	2e-04

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 12/26 (46%), Positives = 14/26 (53%)

Query: 29 FECKTCNRQFPSFQALGGHRASHKKS 54
            C  C + F S QALGGH+ SH   
Sbjct: 2  HTCGVCGKTFSSLQALGGHKKSHCSL 27

Length = 27

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 75  THECSVCGLEFAIGQALGGHMRRHRAG 101
            H C VCG  F+  QALGGH + H + 
Sbjct: 1   VHTCGVCGKTFSSLQALGGHKKSHCSL 27

Length = 27

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	152
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.92
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.84
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.69
KOG3576	267	consensus Ovo and related transcription factors [T	99.48
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.45
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.43
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.37
KOG3608	467	consensus Zn finger proteins [General function pre	99.35
KOG3576	267	consensus Ovo and related transcription factors [T	99.34
PHA00733	128	hypothetical protein	99.21
KOG3608	467	consensus Zn finger proteins [General function pre	99.13
PHA02768	55	hypothetical protein; Provisional	99.07
PLN03086	567	PRLI-interacting factor K; Provisional	98.89
PHA02768	55	hypothetical protein; Provisional	98.79
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.78
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.73
PHA00733	128	hypothetical protein	98.65
PHA00732	79	hypothetical protein	98.6
PHA00616	44	hypothetical protein	98.56
PLN03086	567	PRLI-interacting factor K; Provisional	98.48
PHA00616	44	hypothetical protein	98.48
KOG3993	500	consensus Transcription factor (contains Zn finger	98.44
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.33
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.25
KOG3993	500	consensus Transcription factor (contains Zn finger	98.13
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.11
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.11
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.99
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.97
PHA00732	79	hypothetical protein	97.9
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.75
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.71
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.69
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.69
smart00355	26	ZnF_C2H2 zinc finger.	97.56
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.48
smart00355	26	ZnF_C2H2 zinc finger.	97.27
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.07
PRK04860	160	hypothetical protein; Provisional	96.83
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.79
COG5048	467	FOG: Zn-finger [General function prediction only]	96.77
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.7
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.54
KOG1146	1406	consensus Homeobox protein [General function predi	96.35
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.92
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.8
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.59
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	95.43
KOG2893	341	consensus Zn finger protein [General function pred	95.07
PRK04860	160	hypothetical protein; Provisional	94.95
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.85
COG5189	423	SFP1 Putative transcriptional repressor regulating	94.74
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.61
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	93.15
COG5048	467	FOG: Zn-finger [General function prediction only]	92.99
COG4049	65	Uncharacterized protein containing archaeal-type C	90.79
KOG2186	276	consensus Cell growth-regulating nucleolar protein	88.53
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	86.83
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	86.79
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	86.71
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	85.75
KOG4167	907	consensus Predicted DNA-binding protein, contains	85.39
KOG1146	1406	consensus Homeobox protein [General function predi	84.06
COG4049	65	Uncharacterized protein containing archaeal-type C	83.73
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	83.59
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	83.08
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	81.12

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.92  E-value=7.5e-26  Score=157.83  Aligned_cols=124  Identities=23%  Similarity=0.294  Sum_probs=111.4

Q ss_pred             cchhcccCCCCCCCccccccccC---CCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccc
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAV---ADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQS   69 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~---~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~   69 (152)
                      ..||+++++.+.|.  +|.++|-   ..+.+.|++|+|.|.+-..|+.|+++|+  -+++|..|++         .|+++
T Consensus       134 ~eCgk~ysT~snLs--rHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRT  209 (279)
T KOG2462|consen  134 PECGKSYSTSSNLS--RHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRT  209 (279)
T ss_pred             cccccccccccccc--hhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhccccc
Confidence            46999999999999  9999993   3678999999999999999999999998  4788988886         89999


Q ss_pred             cCCCCceeccccccccccchHHHHHHhhccCCCccc-ccccccccCCCCCcchhhhccCcc
Q 041414           70 PVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA-NEKLSAFSSLSDTAPLVEKANSRR  129 (152)
Q Consensus        70 h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  129 (152)
                      |+|||||.|+.|+|+|...++|+.||++|.+.|.|. ..|+++|+...-+..+..+.-...
T Consensus       210 HTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~C~~~  270 (279)
T KOG2462|consen  210 HTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESACLKY  270 (279)
T ss_pred             ccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhccccc
Confidence            999999999999999999999999999999999998 899999999887777766654433

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.84  E-value=3.1e-22  Score=139.83  Aligned_cols=92  Identities=22%  Similarity=0.340  Sum_probs=84.0

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVK   72 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~   72 (152)
                      ..|+|.+.+-..|.  .|+++|+  -+++|.+|||.|....-|+.|+|+|+|+|||.|..|++         .|+++|++
T Consensus       165 ~~C~K~YvSmpALk--MHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~  240 (279)
T KOG2462|consen  165 KYCGKVYVSMPALK--MHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSD  240 (279)
T ss_pred             CCCCceeeehHHHh--hHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcC
Confidence            36889987777777  9999987  78999999999999999999999999999999999986         79999999


Q ss_pred             CCceeccccccccccchHHHHHHhh
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      .|.|+|..|+|+|...+.|.+|...
T Consensus       241 ~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  241 VKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             CccccCcchhhHHHHHHHHHHhhhh
Confidence            9999999999999999999999864

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.69  E-value=4.1e-18  Score=133.74  Aligned_cols=48  Identities=19%  Similarity=0.434  Sum_probs=44.5

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcC
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      .|.|.|.+.+.|.  +|.+.||||+||.|++||..|..+.+|+.|...|.
T Consensus       358 ~CakvfgS~SaLq--iHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~  405 (958)
T KOG1074|consen  358 FCAKVFGSDSALQ--IHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHR  405 (958)
T ss_pred             hhHhhcCchhhhh--hhhhccCCCCCeeecccccccccccceeeeeeecc
Confidence            5999999999988  99999999999999999999999999999976654

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.48  E-value=1.5e-15  Score=102.31  Aligned_cols=74  Identities=19%  Similarity=0.415  Sum_probs=58.8

Q ss_pred             CCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCCCCceeccccccccccchHHHHH
Q 041414           24 VADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVKPKTHECSVCGLEFAIGQALGGH   94 (152)
Q Consensus        24 ~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H   94 (152)
                      .+...|.|.+|+|.|.....|.+|++-|...+.+-|..|++         +|.++|+|.+||+|..|+|+|.+...|..|
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHH
Confidence            45566888888888888888888888887777776766665         777888888899999999999999889888


Q ss_pred             Hhh
Q 041414           95 MRR   97 (152)
Q Consensus        95 ~~~   97 (152)
                      ++.
T Consensus       193 l~k  195 (267)
T KOG3576|consen  193 LKK  195 (267)
T ss_pred             HHH
Confidence            763

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.45  E-value=1.1e-14  Score=113.53  Aligned_cols=73  Identities=19%  Similarity=0.383  Sum_probs=68.4

Q ss_pred             CCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCCCCceeccccccccccchHHHHH
Q 041414           24 VADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVKPKTHECSVCGLEFAIGQALGGH   94 (152)
Q Consensus        24 ~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H   94 (152)
                      +.+..|.|+.|+|.|...++|.+|.--|+|.+||+|..|.+         .|+|.|+|||||.|..|+|.|...+...+|
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQH  969 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQH  969 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhh
Confidence            56779999999999999999999999999999999999986         678999999999999999999999999999


Q ss_pred             Hh
Q 041414           95 MR   96 (152)
Q Consensus        95 ~~   96 (152)
                      |.
T Consensus       970 MN  971 (1007)
T KOG3623|consen  970 MN  971 (1007)
T ss_pred             hc
Confidence            96

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.43  E-value=1.6e-14  Score=113.82  Aligned_cols=82  Identities=24%  Similarity=0.474  Sum_probs=75.1

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceecc--
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECS--   79 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~--   79 (152)
                      ..|.+.+++++.|+  .|.++|+||+||+|.+||++|..+.+|+.|+-+|...-++               .-+|.|+  
T Consensus       609 iiC~rVlSC~saLq--mHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~---------------R~q~ScP~~  671 (958)
T KOG1074|consen  609 IICLRVLSCPSALQ--MHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPA---------------RVQFSCPST  671 (958)
T ss_pred             eeeeecccchhhhh--hhhhcccCcCccccccccchhccccchhhcccccccCccc---------------cccccCCch
Confidence            46999999999999  9999999999999999999999999999999999776554               3579999  


Q ss_pred             -ccccccccchHHHHHHhhccC
Q 041414           80 -VCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        80 -~C~k~F~~~~~L~~H~~~h~~  100 (152)
                       +|-+.|...-.|.+|+++|.+
T Consensus       672 ~ic~~kftn~V~lpQhIriH~~  693 (958)
T KOG1074|consen  672 FICQKKFTNAVTLPQHIRIHLG  693 (958)
T ss_pred             hhhcccccccccccceEEeecC
Confidence             999999999999999999984

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.37  E-value=1.2e-13  Score=107.77  Aligned_cols=70  Identities=14%  Similarity=0.202  Sum_probs=62.6

Q ss_pred             CCCCCCCCCCc---------ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc-ccccccccCCCCCcchhh
Q 041414           54 SRVTEGSGGGV---------DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA-NEKLSAFSSLSDTAPLVE  123 (152)
Q Consensus        54 ~~~~~c~~~~~---------~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~  123 (152)
                      .-+|.|+.|.+         +|..-|+|.+||+|.+|.|+|..+.+|..|+|.|.|+|||. ..|++.|+-+.+-+.++.
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhc
Confidence            34688988875         88899999999999999999999999999999999999997 899999999877776654

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.35  E-value=2.7e-14  Score=103.34  Aligned_cols=135  Identities=13%  Similarity=0.165  Sum_probs=95.4

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcC--CCCCCCCCCC-----------------
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHK--KSRVTEGSGG-----------------   62 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~--~~~~~~c~~~-----------------   62 (152)
                      |.|.+.|.++..|.  .|++.|++||...|+.||.-|..+..|-.|.+..+  ...+|.|..|                 
T Consensus       183 ~~Ct~~~~~k~~Lr--eH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rH  260 (467)
T KOG3608|consen  183 AMCTKHMGNKYRLR--EHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRH  260 (467)
T ss_pred             hhhhhhhccHHHHH--HHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHh
Confidence            57888888888888  99999999999999999999998888888865432  3334444333                 


Q ss_pred             ---------Cc---------cccc-ccCCCCceeccccccccccchHHHHHHhhccCCCccc---ccccccccCCCCCcc
Q 041414           63 ---------GV---------DTQQ-SPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA---NEKLSAFSSLSDTAP  120 (152)
Q Consensus        63 ---------~~---------~h~~-~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~---~~~~~~~~~~~~~~~  120 (152)
                               ..         .|++ .|+..|||+|..|++.|.+.+.|.+|..+|. +..|.   +.|..++........
T Consensus       261 vn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~  339 (467)
T KOG3608|consen  261 VNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRR  339 (467)
T ss_pred             hhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHH
Confidence                     21         5554 5778899999999999999999999999888 55554   457666666555555


Q ss_pred             hhhhccCcceeecccCCCCCCCchh
Q 041414          121 LVEKANSRRVLCLDLNLTPYENDLE  145 (152)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~p~~~d~~  145 (152)
                      +.+..+      ...|.++|-+-++
T Consensus       340 H~~evh------Eg~np~~Y~CH~C  358 (467)
T KOG3608|consen  340 HFLEVH------EGNNPILYACHCC  358 (467)
T ss_pred             HHHHhc------cCCCCCceeeecc
Confidence            544332      1233456666443

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.34  E-value=1.2e-13  Score=93.21  Aligned_cols=75  Identities=19%  Similarity=0.192  Sum_probs=64.9

Q ss_pred             CCCCCCCCCCCCc---------ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc-ccccccccCCCCCcch
Q 041414           52 KKSRVTEGSGGGV---------DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA-NEKLSAFSSLSDTAPL  121 (152)
Q Consensus        52 ~~~~~~~c~~~~~---------~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~~~~~~~~~~  121 (152)
                      .+...+.|..|++         +|++.|...|.|-|..|||.|...-.|++|+++|+|.+||. ..|+++|.+.-++..+
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHH
Confidence            3445577888876         89999999999999999999999999999999999999998 8999999998877777


Q ss_pred             hhhcc
Q 041414          122 VEKAN  126 (152)
Q Consensus       122 ~~~~~  126 (152)
                      .++.+
T Consensus       193 l~kvh  197 (267)
T KOG3576|consen  193 LKKVH  197 (267)
T ss_pred             HHHHc
Confidence            66644

>PHA00733 hypothetical protein

Probab=99.21  E-value=1.6e-11  Score=78.92  Aligned_cols=76  Identities=20%  Similarity=0.280  Sum_probs=50.2

Q ss_pred             chhcccCCCCCCCcc----ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceec
Q 041414            3 NCLMFMPHGGDFDAV----NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHEC   78 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~----~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C   78 (152)
                      .|.+.|.....|...    .|+.. .+++||.|+.|++.|.....|..|++.+                     +.+|.|
T Consensus        45 ~~~~~~~~~~~l~~~~~l~~~~~~-~~~kPy~C~~Cgk~Fss~s~L~~H~r~h---------------------~~~~~C  102 (128)
T PHA00733         45 VVKTLIYNPQLLDESSYLYKLLTS-KAVSPYVCPLCLMPFSSSVSLKQHIRYT---------------------EHSKVC  102 (128)
T ss_pred             HHhhhccChhhhcchHHHHhhccc-CCCCCccCCCCCCcCCCHHHHHHHHhcC---------------------CcCccC
Confidence            355555555555422    33333 3467777888888887777777777654                     235788


Q ss_pred             cccccccccchHHHHHHhhccC
Q 041414           79 SVCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        79 ~~C~k~F~~~~~L~~H~~~h~~  100 (152)
                      ..|+++|.....|..|+...++
T Consensus       103 ~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        103 PVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCCccCCHHHHHHHHHHhcC
Confidence            8888888888888888776543

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.13  E-value=2.2e-11  Score=88.45  Aligned_cols=93  Identities=17%  Similarity=0.301  Sum_probs=73.0

Q ss_pred             cchhcccCCCCCCCccccccc-cCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC--CCc---------cccc-
Q 041414            2 ANCLMFMPHGGDFDAVNGVNM-AVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG--GGV---------DTQQ-   68 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~-h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~--~~~---------~h~~-   68 (152)
                      ++|.|..+..++|.  .||+. |+..+||+|+.|++.|...+.|.+|..+|+ +-.|.|+.  |..         +|.+ 
T Consensus       267 plCdmtc~~~ssL~--~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~e  343 (467)
T KOG3608|consen  267 PLCDMTCSSASSLT--THIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLE  343 (467)
T ss_pred             cccccCCCChHHHH--HHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHH
Confidence            57888888888888  88875 778899999999999999999999988887 55677765  442         4443 


Q ss_pred             ccCCC--CceeccccccccccchHHHHHHhh
Q 041414           69 SPVKP--KTHECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        69 ~h~~~--k~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      .|.|.  .+|.|..|++.|.+..+|.+|+..
T Consensus       344 vhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~k  374 (467)
T KOG3608|consen  344 VHEGNNPILYACHCCDRFFTSGKSLSAHLMK  374 (467)
T ss_pred             hccCCCCCceeeecchhhhccchhHHHHHHH
Confidence            45443  469999999999999999999754

>PHA02768 hypothetical protein; Provisional

Probab=99.07  E-value=6.4e-11  Score=63.98  Aligned_cols=44  Identities=16%  Similarity=0.230  Sum_probs=38.6

Q ss_pred             ceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHH
Q 041414           28 AFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALG   92 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~   92 (152)
                      -|.|++||+.|...++|..|+++|+                     ++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~---------------------k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN---------------------TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC---------------------CcccCCcccceecccceeE
Confidence            4799999999999999999999985                     3789999999999877653

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.89  E-value=3.6e-09  Score=82.54  Aligned_cols=83  Identities=14%  Similarity=0.222  Sum_probs=66.4

Q ss_pred             ceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc--------ccccccCCCCceecccccccccc----------ch
Q 041414           28 AFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV--------DTQQSPVKPKTHECSVCGLEFAI----------GQ   89 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~--------~h~~~h~~~k~~~C~~C~k~F~~----------~~   89 (152)
                      .+.|+.|++.|. ...|..|+.+++  +++.|. |+.        .|+..|.+++++.|..|++.|..          ..
T Consensus       453 H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s  528 (567)
T PLN03086        453 HVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVLEKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLR  528 (567)
T ss_pred             CccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCcchhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhh
Confidence            358999999996 678999999985  678887 754        78888999999999999999952          35


Q ss_pred             HHHHHHhhccCCCccc-ccccccccCC
Q 041414           90 ALGGHMRRHRAGASHA-NEKLSAFSSL  115 (152)
Q Consensus        90 ~L~~H~~~h~~~~~~~-~~~~~~~~~~  115 (152)
                      .|..|..++ |.+++. ..|++.+...
T Consensus       529 ~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr  554 (567)
T PLN03086        529 GMSEHESIC-GSRTAPCDSCGRSVMLK  554 (567)
T ss_pred             hHHHHHHhc-CCcceEccccCCeeeeh
Confidence            899999987 555554 7888776653

>PHA02768 hypothetical protein; Provisional

Probab=98.79  E-value=3.9e-09  Score=57.07  Aligned_cols=42  Identities=17%  Similarity=0.329  Sum_probs=35.5

Q ss_pred             ceeccccccccccchHHHHHHhhccCCCccc-ccccccccCCCCC
Q 041414           75 THECSVCGLEFAIGQALGGHMRRHRAGASHA-NEKLSAFSSLSDT  118 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~~~~~~~  118 (152)
                      .|+|+.||+.|...++|..|+++|+  +++. ..|++.|+.....
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            5899999999999999999999999  4554 8899988865443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.78  E-value=7.4e-10  Score=51.38  Aligned_cols=23  Identities=13%  Similarity=0.596  Sum_probs=21.4

Q ss_pred             cccccccCCCcceecCcccccCC
Q 041414           17 VNGVNMAVADRAFECKTCNRQFP   39 (152)
Q Consensus        17 ~~h~~~h~~e~~~~C~~C~k~f~   39 (152)
                      ..||++|++++||.|++|++.|.
T Consensus         3 ~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    3 RRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHhhhcCCCCCCCCCCCcCeeC
Confidence            38999999999999999999986

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.73  E-value=9.1e-09  Score=47.65  Aligned_cols=26  Identities=31%  Similarity=0.590  Sum_probs=20.7

Q ss_pred             HHHHHHHhcCCCCCCCCCCCCcccccccCCCCceecccccccccc
Q 041414           43 ALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAI   87 (152)
Q Consensus        43 ~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~   87 (152)
                      +|.+|+++|++                   ++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~-------------------~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTG-------------------EKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSS-------------------SSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCC-------------------CCCCCCCCCcCeeCc
Confidence            46677777765                   889999999999964

...

>PHA00733 hypothetical protein

Probab=98.65  E-value=6e-09  Score=67.08  Aligned_cols=87  Identities=15%  Similarity=0.105  Sum_probs=64.7

Q ss_pred             CCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhccCCCcc
Q 041414           25 ADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASH  104 (152)
Q Consensus        25 ~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~  104 (152)
                      ..+++.|.+|.+.|.....|..+.-...             ++. +.+++||.|..||+.|.....|..|+++|.. ...
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~-------------~~~-~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~-~~~  101 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYK-------------LLT-SKAVSPYVCPLCLMPFSSSVSLKQHIRYTEH-SKV  101 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHh-------------hcc-cCCCCCccCCCCCCcCCCHHHHHHHHhcCCc-Ccc
Confidence            4678999999999988877776622110             111 2237899999999999999999999997732 234


Q ss_pred             cccccccccCCCCCcchhhhcc
Q 041414          105 ANEKLSAFSSLSDTAPLVEKAN  126 (152)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~  126 (152)
                      +..|++.|.....+..++...+
T Consensus       102 C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733        102 CPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CCCCCCccCCHHHHHHHHHHhc
Confidence            5899999999887777666544

>PHA00732 hypothetical protein

Probab=98.60  E-value=3.3e-08  Score=58.16  Aligned_cols=47  Identities=26%  Similarity=0.537  Sum_probs=37.4

Q ss_pred             ceecCcccccCCChhHHHHHHHh-cCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhcc
Q 041414           28 AFECKTCNRQFPSFQALGGHRAS-HKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~-h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~   99 (152)
                      ||.|..|++.|....+|..|++. |.                      ++.|+.||+.|.   .|..|..+..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~----------------------~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT----------------------LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC----------------------CCccCCCCCEeC---ChhhhhcccC
Confidence            68899999999999999999874 43                      247999999998   4777876543

>PHA00616 hypothetical protein

Probab=98.56  E-value=2.9e-08  Score=51.14  Aligned_cols=31  Identities=16%  Similarity=0.223  Sum_probs=28.8

Q ss_pred             ceeccccccccccchHHHHHHhhccCCCccc
Q 041414           75 THECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      ||+|+.||+.|...+.|..|++.|+|+++..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~   31 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLT   31 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccc
Confidence            6899999999999999999999999997754

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.48  E-value=9.4e-08  Score=74.77  Aligned_cols=86  Identities=16%  Similarity=0.322  Sum_probs=67.3

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc------------------
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV------------------   64 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~------------------   64 (152)
                      .|++.|. ...+.  .|+.+|.  +++.|+ ||+.+ ....|..|+.+|...+++.|..|..                  
T Consensus       458 ~Cgk~f~-~s~Le--kH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~L  530 (567)
T PLN03086        458 KCGQAFQ-QGEME--KHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGM  530 (567)
T ss_pred             CCCCccc-hHHHH--HHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhH
Confidence            5777775 45565  8988874  899999 99765 5689999999999999999988865                  


Q ss_pred             -ccccccCCCCceeccccccccccchHHHHHHhh
Q 041414           65 -DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        65 -~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                       .|... .|.+++.|..||+.|.... |..|+..
T Consensus       531 t~HE~~-CG~rt~~C~~Cgk~Vrlrd-m~~H~~~  562 (567)
T PLN03086        531 SEHESI-CGSRTAPCDSCGRSVMLKE-MDIHQIA  562 (567)
T ss_pred             HHHHHh-cCCcceEccccCCeeeehh-HHHHHHH
Confidence             23333 4889999999999987654 6677654

>PHA00616 hypothetical protein

Probab=98.48  E-value=5.9e-08  Score=50.02  Aligned_cols=32  Identities=19%  Similarity=0.260  Sum_probs=28.6

Q ss_pred             ceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           28 AFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      ||.|+.||+.|...+.|..|++.|++++++.+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            68999999999999999999999999766544

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.44  E-value=7.6e-08  Score=71.76  Aligned_cols=75  Identities=21%  Similarity=0.438  Sum_probs=52.1

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCCCCCC--C-CCCC------c---cccc--ccCCCCceeccccccccccchHHH
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKSRVTE--G-SGGG------V---DTQQ--SPVKPKTHECSVCGLEFAIGQALG   92 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~--c-~~~~------~---~h~~--~h~~~k~~~C~~C~k~F~~~~~L~   92 (152)
                      .-|+|++|+|.|....+|..|+|+|.-.....  . ..-.      .   .-.+  ....+-.|.|..|+|.|.+...|+
T Consensus       294 vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLr  373 (500)
T KOG3993|consen  294 VEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLR  373 (500)
T ss_pred             eeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHH
Confidence            35999999999999999999999995322111  0 0000      0   0000  012234899999999999999999


Q ss_pred             HHHhhccCC
Q 041414           93 GHMRRHRAG  101 (152)
Q Consensus        93 ~H~~~h~~~  101 (152)
                      .|+.+|...
T Consensus       374 KHqlthq~~  382 (500)
T KOG3993|consen  374 KHQLTHQRA  382 (500)
T ss_pred             HhHHhhhcc
Confidence            999887643

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.33  E-value=3.1e-07  Score=41.11  Aligned_cols=23  Identities=43%  Similarity=0.911  Sum_probs=21.6

Q ss_pred             eeccccccccccchHHHHHHhhc
Q 041414           76 HECSVCGLEFAIGQALGGHMRRH   98 (152)
Q Consensus        76 ~~C~~C~k~F~~~~~L~~H~~~h   98 (152)
                      |.|+.|++.|.....|.+|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.25  E-value=6.4e-07  Score=64.77  Aligned_cols=72  Identities=19%  Similarity=0.412  Sum_probs=51.3

Q ss_pred             CCCcceecCc--ccccCCChhHHHHHHHh-cCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHh
Q 041414           24 VADRAFECKT--CNRQFPSFQALGGHRAS-HKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMR   96 (152)
Q Consensus        24 ~~e~~~~C~~--C~k~f~~~~~L~~h~~~-h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~   96 (152)
                      .++|||+|++  |.|+|.....|+.|+.- |..++..+-+.-. .+.-.....|||.|++|+|.+.....|+.|..
T Consensus       345 ~d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~-~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         345 KDGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPE-KMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             ecCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCcc-ccccccccCCceeccccchhhccCccceeccc
Confidence            4579999987  99999999999999763 4333222211100 11112345799999999999999999998865

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.13  E-value=1.8e-06  Score=64.61  Aligned_cols=50  Identities=18%  Similarity=0.422  Sum_probs=42.7

Q ss_pred             cchhcccCCCCCCCccccccccC--------CCc-------------------------ceecCcccccCCChhHHHHHH
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAV--------ADR-------------------------AFECKTCNRQFPSFQALGGHR   48 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~--------~e~-------------------------~~~C~~C~k~f~~~~~L~~h~   48 (152)
                      +.|+|.|+...+|.  .|.|+|.        +..                         -|.|.+|+|.|.....|+.|+
T Consensus       299 PEC~KVFsCPANLA--SHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHq  376 (500)
T KOG3993|consen  299 PECDKVFSCPANLA--SHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQ  376 (500)
T ss_pred             CcccccccCchhhh--hhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhH
Confidence            57999999999999  9999983        222                         288999999999999999998


Q ss_pred             HhcCC
Q 041414           49 ASHKK   53 (152)
Q Consensus        49 ~~h~~   53 (152)
                      .+|..
T Consensus       377 lthq~  381 (500)
T KOG3993|consen  377 LTHQR  381 (500)
T ss_pred             Hhhhc
Confidence            88753

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.11  E-value=1.7e-06  Score=38.63  Aligned_cols=23  Identities=30%  Similarity=0.710  Sum_probs=21.3

Q ss_pred             eecCcccccCCChhHHHHHHHhc
Q 041414           29 FECKTCNRQFPSFQALGGHRASH   51 (152)
Q Consensus        29 ~~C~~C~k~f~~~~~L~~h~~~h   51 (152)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.11  E-value=6.4e-06  Score=44.96  Aligned_cols=51  Identities=24%  Similarity=0.494  Sum_probs=38.7

Q ss_pred             ceecCcccccCCChhHHHHHHHh-cCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhcc
Q 041414           28 AFECKTCNRQFPSFQALGGHRAS-HKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~-h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~   99 (152)
                      .|.|++|++. .+...|..|... |..+                  .+.+.|++|...+.  .+|.+|+..++
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~------------------~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSE------------------SKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCC------------------CCCccCCCchhhhh--hHHHHHHHHhc
Confidence            5899999995 556789999765 4432                  35789999998655  48999998754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.99  E-value=4e-06  Score=38.96  Aligned_cols=26  Identities=38%  Similarity=0.645  Sum_probs=23.8

Q ss_pred             ceeccccccccccchHHHHHHhhccC
Q 041414           75 THECSVCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~h~~  100 (152)
                      ||+|..|++.|.....|..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999998753

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.97  E-value=5.1e-06  Score=37.20  Aligned_cols=24  Identities=38%  Similarity=0.832  Sum_probs=20.1

Q ss_pred             eeccccccccccchHHHHHHhhcc
Q 041414           76 HECSVCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        76 ~~C~~C~k~F~~~~~L~~H~~~h~   99 (152)
                      |.|++|++.|.+...|..|+++|.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999998763

...

>PHA00732 hypothetical protein

Probab=97.90  E-value=8.3e-06  Score=48.00  Aligned_cols=38  Identities=24%  Similarity=0.411  Sum_probs=32.7

Q ss_pred             ceeccccccccccchHHHHHHhh-ccCCCcccccccccccC
Q 041414           75 THECSVCGLEFAIGQALGGHMRR-HRAGASHANEKLSAFSS  114 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~-h~~~~~~~~~~~~~~~~  114 (152)
                      ||.|..||+.|.+...|..|++. |.+.  .+..|+++|..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~~--~C~~CgKsF~~   39 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTLT--KCPVCNKSYRR   39 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCCC--ccCCCCCEeCC
Confidence            68999999999999999999984 6653  46899999984

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.75  E-value=2.3e-05  Score=47.88  Aligned_cols=70  Identities=20%  Similarity=0.349  Sum_probs=22.8

Q ss_pred             ecCcccccCCChhHHHHHHHhcCCCCCCCCCCC-Cc----ccccccCCCCceeccccccccccchHHHHHHhhccC
Q 041414           30 ECKTCNRQFPSFQALGGHRASHKKSRVTEGSGG-GV----DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        30 ~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~-~~----~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~  100 (152)
                      .|..|+..|.....|..|+...++...-..... ..    .+.+. .....+.|..|++.|.+...|..|++.+..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~H   75 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRK-KVKESFRCPYCNKTFRSREALQEHMRSKHH   75 (100)
T ss_dssp             -------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTTT
T ss_pred             Ccccccccccccccccccccccccccccccccccccccccccccc-ccCCCCCCCccCCCCcCHHHHHHHHcCccC
Confidence            488889998888888888865433211110000 00    11111 112369999999999999999999997543

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.71  E-value=1.8e-05  Score=36.68  Aligned_cols=25  Identities=44%  Similarity=0.897  Sum_probs=23.0

Q ss_pred             ceecCcccccCCChhHHHHHHHhcC
Q 041414           28 AFECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      ||.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999998774

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.69  E-value=3.3e-05  Score=34.44  Aligned_cols=23  Identities=35%  Similarity=0.756  Sum_probs=19.5

Q ss_pred             eecCcccccCCChhHHHHHHHhc
Q 041414           29 FECKTCNRQFPSFQALGGHRASH   51 (152)
Q Consensus        29 ~~C~~C~k~f~~~~~L~~h~~~h   51 (152)
                      |.|++|++.|.....|..|+.+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999999876

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.69  E-value=4.1e-05  Score=40.47  Aligned_cols=32  Identities=16%  Similarity=0.387  Sum_probs=23.6

Q ss_pred             CCCceeccccccccccchHHHHHHhhccCCCc
Q 041414           72 KPKTHECSVCGLEFAIGQALGGHMRRHRAGAS  103 (152)
Q Consensus        72 ~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  103 (152)
                      .+.|-.|++|+..+.+..+|++|+.++++.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            36799999999999999999999998888765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.56  E-value=5.6e-05  Score=34.19  Aligned_cols=25  Identities=40%  Similarity=0.675  Sum_probs=22.3

Q ss_pred             eeccccccccccchHHHHHHhhccC
Q 041414           76 HECSVCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        76 ~~C~~C~k~F~~~~~L~~H~~~h~~  100 (152)
                      |.|..|++.|.....|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            5799999999999999999997753

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.48  E-value=0.00013  Score=38.64  Aligned_cols=33  Identities=12%  Similarity=0.238  Sum_probs=23.6

Q ss_pred             CCCcceecCcccccCCChhHHHHHHHhcCCCCC
Q 041414           24 VADRAFECKTCNRQFPSFQALGGHRASHKKSRV   56 (152)
Q Consensus        24 ~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~   56 (152)
                      ..+.|..|++|+..+.+..+|.+|+.++++.+|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            467899999999999999999999988776554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.27  E-value=0.00025  Score=31.89  Aligned_cols=24  Identities=33%  Similarity=0.693  Sum_probs=21.7

Q ss_pred             eecCcccccCCChhHHHHHHHhcC
Q 041414           29 FECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        29 ~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998764

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.07  E-value=0.00034  Score=31.62  Aligned_cols=23  Identities=26%  Similarity=0.660  Sum_probs=21.0

Q ss_pred             eeccccccccccchHHHHHHhhc
Q 041414           76 HECSVCGLEFAIGQALGGHMRRH   98 (152)
Q Consensus        76 ~~C~~C~k~F~~~~~L~~H~~~h   98 (152)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999764

>PRK04860 hypothetical protein; Provisional

Probab=96.83  E-value=0.00084  Score=44.87  Aligned_cols=39  Identities=18%  Similarity=0.462  Sum_probs=30.3

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccc
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIG   88 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~   88 (152)
                      -+|.|. |++   ...++.+|.++|.+                   +++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g-------------------~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRG-------------------EAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcC-------------------CccEECCCCCceeEEe
Confidence            478998 887   55678888888876                   6788888888887654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.79  E-value=0.00091  Score=29.88  Aligned_cols=23  Identities=26%  Similarity=0.629  Sum_probs=18.4

Q ss_pred             eeccccccccccchHHHHHHhhcc
Q 041414           76 HECSVCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        76 ~~C~~C~k~F~~~~~L~~H~~~h~   99 (152)
                      |+|+.|+.... ...|.+|+++|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999998888 889999999865

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.77  E-value=0.00094  Score=50.77  Aligned_cols=56  Identities=16%  Similarity=0.354  Sum_probs=49.3

Q ss_pred             cchhcccCCCCCCCcccccc--ccCCC--cceecC--cccccCCChhHHHHHHHhcCCCCCCCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVN--MAVAD--RAFECK--TCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~--~h~~e--~~~~C~--~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      +.|...|+....+.  .|.+  .|+++  +|+.|+  .|++.|.....+..|...|.+..+..+
T Consensus       293 ~~~~~~~s~~~~l~--~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         293 KQCNISFSRSSPLT--RHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             ccccCCcccccccc--ccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            46788898898888  9999  89999  999999  799999999999999999988766553

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.70  E-value=0.00086  Score=30.21  Aligned_cols=23  Identities=39%  Similarity=0.716  Sum_probs=20.6

Q ss_pred             eecCcccccCCChhHHHHHHHhc
Q 041414           29 FECKTCNRQFPSFQALGGHRASH   51 (152)
Q Consensus        29 ~~C~~C~k~f~~~~~L~~h~~~h   51 (152)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999998753

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.54  E-value=0.00081  Score=31.03  Aligned_cols=22  Identities=27%  Similarity=0.558  Sum_probs=20.4

Q ss_pred             eeccccccccccchHHHHHHhh
Q 041414           76 HECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        76 ~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      |.|..|++.|.....|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=96.35  E-value=0.0032  Score=53.86  Aligned_cols=93  Identities=17%  Similarity=0.305  Sum_probs=63.6

Q ss_pred             cchhcccCCCCCCCcccccc-ccCCCcceecCcccccCCChhHHHHHHHh-cCCCCCCCCCCCCcccccc------cCCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVN-MAVADRAFECKTCNRQFPSFQALGGHRAS-HKKSRVTEGSGGGVDTQQS------PVKP   73 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~-~h~~e~~~~C~~C~k~f~~~~~L~~h~~~-h~~~~~~~c~~~~~~h~~~------h~~~   73 (152)
                      .-|+..+.+.+.+.  .|+. .|+-.+.+.|+.|+..|+....|..|||. |...+.-.|.... .|.+.      -.+.
T Consensus       440 ~~~e~~~~s~r~~~--~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq-~~~~~arg~~~~~~~  516 (1406)
T KOG1146|consen  440 TKAEPLLESKRSLE--GQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQ-NHPRLARGEVYRCPG  516 (1406)
T ss_pred             cchhhhhhhhcccc--cceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhcc-ccccccccccccCCC
Confidence            34555666666555  5543 46667999999999999999999999987 3221111122111 22211      1235


Q ss_pred             CceeccccccccccchHHHHHHhh
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      ++|.|..|..++....+|.+|++.
T Consensus       517 ~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  517 KPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             CcccceeeeeeeecchHHHHHHHH
Confidence            799999999999999999999874

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.92  E-value=0.006  Score=27.61  Aligned_cols=21  Identities=29%  Similarity=0.618  Sum_probs=17.3

Q ss_pred             eeccccccccccchHHHHHHhh
Q 041414           76 HECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        76 ~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      ..|+.||+.| ....|.+|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 56778889764

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.80  E-value=0.0068  Score=26.92  Aligned_cols=23  Identities=22%  Similarity=0.496  Sum_probs=18.0

Q ss_pred             eecCcccccCCChhHHHHHHHhcC
Q 041414           29 FECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        29 ~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      |.|+.|+.... ...|..|++.+.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            68999998887 889999998754

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.59  E-value=0.0036  Score=28.79  Aligned_cols=22  Identities=36%  Similarity=0.694  Sum_probs=19.6

Q ss_pred             eecCcccccCCChhHHHHHHHh
Q 041414           29 FECKTCNRQFPSFQALGGHRAS   50 (152)
Q Consensus        29 ~~C~~C~k~f~~~~~L~~h~~~   50 (152)
                      |.|..|++.|.....+..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6799999999999999988764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=95.43  E-value=0.013  Score=35.51  Aligned_cols=24  Identities=42%  Similarity=0.742  Sum_probs=21.1

Q ss_pred             ceecCcccccCCChhHHHHHHHhc
Q 041414           28 AFECKTCNRQFPSFQALGGHRASH   51 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h   51 (152)
                      .+.|.+|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            589999999999999999999864

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=95.07  E-value=0.0078  Score=42.44  Aligned_cols=48  Identities=31%  Similarity=0.556  Sum_probs=38.1

Q ss_pred             eecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHH-Hhhcc
Q 041414           29 FECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGH-MRRHR   99 (152)
Q Consensus        29 ~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H-~~~h~   99 (152)
                      -+|=+|++.|....-|.+|++                       .|.|+|.+|-|..-+...|..| |++|.
T Consensus        11 pwcwycnrefddekiliqhqk-----------------------akhfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   11 PWCWYCNREFDDEKILIQHQK-----------------------AKHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             ceeeecccccchhhhhhhhhh-----------------------hccceeeeehhhhccCCCceeehhhhhh
Confidence            468899999999988888876                       5679999999877777777776 45554

>PRK04860 hypothetical protein; Provisional

Probab=94.95  E-value=0.019  Score=38.40  Aligned_cols=38  Identities=16%  Similarity=0.071  Sum_probs=32.0

Q ss_pred             CceeccccccccccchHHHHHHhhccCCCccc-ccccccccCC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRAGASHA-NEKLSAFSSL  115 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~~~~  115 (152)
                      -+|.|. |++   ....+.+|.++|+++++|. ..|+..+...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            479998 997   7778899999999999887 6888877654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.85  E-value=0.021  Score=27.70  Aligned_cols=23  Identities=17%  Similarity=0.541  Sum_probs=20.6

Q ss_pred             ceeccccccccccchHHHHHHhh
Q 041414           75 THECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      +|.|..|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=94.74  E-value=0.031  Score=41.15  Aligned_cols=26  Identities=27%  Similarity=0.478  Sum_probs=23.3

Q ss_pred             CCCceeccc--cccccccchHHHHHHhh
Q 041414           72 KPKTHECSV--CGLEFAIGQALGGHMRR   97 (152)
Q Consensus        72 ~~k~~~C~~--C~k~F~~~~~L~~H~~~   97 (152)
                      ++|||+|++  |.|.+.....|+.|+.-
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lh  373 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLH  373 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhc
Confidence            369999998  99999999999999873

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.61  E-value=0.031  Score=27.08  Aligned_cols=23  Identities=30%  Similarity=0.576  Sum_probs=20.1

Q ss_pred             ceecCcccccCCChhHHHHHHHh
Q 041414           28 AFECKTCNRQFPSFQALGGHRAS   50 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~   50 (152)
                      +|.|++|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            68899999999999999888753

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=93.15  E-value=0.11  Score=28.09  Aligned_cols=35  Identities=23%  Similarity=0.325  Sum_probs=24.3

Q ss_pred             ceeccccccccccchHHHHHHhh-ccCCC-cc-cccccc
Q 041414           75 THECSVCGLEFAIGQALGGHMRR-HRAGA-SH-ANEKLS  110 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~-h~~~~-~~-~~~~~~  110 (152)
                      .|.|++|++. .....|..|... |..+. .+ ++.|..
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~   39 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSS   39 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchh
Confidence            4899999995 456789999765 65542 22 377764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.99  E-value=0.055  Score=41.11  Aligned_cols=61  Identities=26%  Similarity=0.412  Sum_probs=46.0

Q ss_pred             ceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCC--Cceecc--ccccccccchHHHHHHhhccCCCc
Q 041414           28 AFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKP--KTHECS--VCGLEFAIGQALGGHMRRHRAGAS  103 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~--k~~~C~--~C~k~F~~~~~L~~H~~~h~~~~~  103 (152)
                      ++.|..|...|.....|..|.+.                 ..|.++  +++.|+  .|++.|.+...+.+|..+|.+..+
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~-----------------~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRS-----------------VNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISP  351 (467)
T ss_pred             CCCCccccCCccccccccccccc-----------------cccccccCCceeeeccCCCccccccccccCCcccccCCCc
Confidence            56677777777777777666651                 034446  788888  799999999999999999988775


Q ss_pred             cc
Q 041414          104 HA  105 (152)
Q Consensus       104 ~~  105 (152)
                      ..
T Consensus       352 ~~  353 (467)
T COG5048         352 AK  353 (467)
T ss_pred             cc
Confidence            54

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=90.79  E-value=0.13  Score=27.82  Aligned_cols=28  Identities=18%  Similarity=0.362  Sum_probs=24.2

Q ss_pred             cCCCCceeccccccccccchHHHHHHhh
Q 041414           70 PVKPKTHECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        70 h~~~k~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      ..||.-+.|+.||..|.......+|...
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            4567889999999999999999999754

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=88.53  E-value=0.39  Score=34.35  Aligned_cols=47  Identities=19%  Similarity=0.483  Sum_probs=35.3

Q ss_pred             ceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHh
Q 041414           28 AFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMR   96 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~   96 (152)
                      -|.|.+||..... ..+.+|+-...+                    .-|.|..||+.|.. -....|..
T Consensus         3 ~FtCnvCgEsvKK-p~vekH~srCrn--------------------~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    3 FFTCNVCGESVKK-PQVEKHMSRCRN--------------------AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             EEehhhhhhhccc-cchHHHHHhccC--------------------CeeEEeeccccccc-chhhhhhh
Confidence            3789999998764 557778765443                    36999999999998 45667765

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=86.83  E-value=0.47  Score=22.79  Aligned_cols=10  Identities=40%  Similarity=0.973  Sum_probs=7.7

Q ss_pred             Cceecccccc
Q 041414           74 KTHECSVCGL   83 (152)
Q Consensus        74 k~~~C~~C~k   83 (152)
                      .++.|+.||.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4788888874

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00614 ZnF_BED BED zinc finger

Probab=86.79  E-value=0.61  Score=24.65  Aligned_cols=24  Identities=29%  Similarity=0.728  Sum_probs=19.1

Q ss_pred             eeccccccccccc-----hHHHHHHh-hcc
Q 041414           76 HECSVCGLEFAIG-----QALGGHMR-RHR   99 (152)
Q Consensus        76 ~~C~~C~k~F~~~-----~~L~~H~~-~h~   99 (152)
                      -.|..|++.+...     ++|.+|++ +|.
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~~~h~   48 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLRRKHP   48 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHHhHCc
Confidence            5699999988665     69999998 564

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=86.71  E-value=0.22  Score=35.06  Aligned_cols=20  Identities=20%  Similarity=0.659  Sum_probs=15.5

Q ss_pred             CcceecCcccccCCChhHHH
Q 041414           26 DRAFECKTCNRQFPSFQALG   45 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~   45 (152)
                      ++...|++|++.|..+.-..
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs   22 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRS   22 (214)
T ss_pred             CCceECCCCCCeeeeeEEEc
Confidence            46789999999998774333

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=85.75  E-value=0.48  Score=30.67  Aligned_cols=30  Identities=30%  Similarity=0.571  Sum_probs=19.0

Q ss_pred             CCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      +..-.|-+||+.|..   |++|++.|.|-.+..
T Consensus        70 ~d~i~clecGk~~k~---LkrHL~~~~gltp~e   99 (132)
T PF05443_consen   70 PDYIICLECGKKFKT---LKRHLRTHHGLTPEE   99 (132)
T ss_dssp             SS-EE-TBT--EESB---HHHHHHHTT-S-HHH
T ss_pred             cCeeEEccCCcccch---HHHHHHHccCCCHHH
Confidence            445789999999987   589999997766543

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>KOG4167 consensus Predicted DNA-binding protein, contains SANT and ELM2 domains [Transcription]

Probab=85.39  E-value=0.22  Score=40.80  Aligned_cols=28  Identities=29%  Similarity=0.511  Sum_probs=24.8

Q ss_pred             CceeccccccccccchHHHHHHhhccCC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      -.|.|.+|+|+|-....++.||++|.-.
T Consensus       791 giFpCreC~kvF~KiKSrNAHMK~Hr~q  818 (907)
T KOG4167|consen  791 GIFPCRECGKVFFKIKSRNAHMKTHRQQ  818 (907)
T ss_pred             ceeehHHHHHHHHHHhhhhHHHHHHHHH
Confidence            3599999999999999999999999643

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=84.06  E-value=0.53  Score=41.11  Aligned_cols=70  Identities=24%  Similarity=0.429  Sum_probs=45.4

Q ss_pred             CcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhc
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRH   98 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h   98 (152)
                      ..+|.|..|...|.....|..|++.-  .+-.+.......+...+....+| |..|...|.....|..||++-
T Consensus      1282 ~~~~~~~~~~~~~~~~~~l~~~~~k~--~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~~~~~alqihm~~~ 1351 (1406)
T KOG1146|consen 1282 THRYLCRQCKMAFDGEAPLTAHQRKF--CFAGRGSGGSMPPPLRVPDCTYH-CLACEVLLSGREALQIHMRSS 1351 (1406)
T ss_pred             chhHHHHHHHhhhcchhHHHHHHHHH--HhccCccccCCCCcccCcccccc-chHHHhhcchhHHHHHHHHHh
Confidence            34677777877777777777776211  00011111111344455556678 999999999999999999863

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=83.73  E-value=0.59  Score=25.32  Aligned_cols=32  Identities=13%  Similarity=0.199  Sum_probs=26.2

Q ss_pred             cccCCCcceecCcccccCCChhHHHHHHHhcC
Q 041414           21 NMAVADRAFECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      ...-||.-+.|+-||..|....++.+|....+
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            34567888999999999999999999976433

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=83.59  E-value=1.1  Score=22.85  Aligned_cols=24  Identities=25%  Similarity=0.574  Sum_probs=16.0

Q ss_pred             CCceeccccccccccc----hHHHHHHh
Q 041414           73 PKTHECSVCGLEFAIG----QALGGHMR   96 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~----~~L~~H~~   96 (152)
                      .....|..|++.+...    +.|.+|++
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~   41 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLK   41 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHH
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhh
Confidence            4567899999988764    78999984

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=83.08  E-value=0.94  Score=20.51  Aligned_cols=20  Identities=25%  Similarity=0.517  Sum_probs=15.8

Q ss_pred             eeccccccccccchHHHHHHh
Q 041414           76 HECSVCGLEFAIGQALGGHMR   96 (152)
Q Consensus        76 ~~C~~C~k~F~~~~~L~~H~~   96 (152)
                      ..|++|++.+ ....++.|+.
T Consensus         2 v~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        2 VQCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             CcCCCCcCcc-cHHHHHHHHH
Confidence            3699999998 5577888875

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=81.12  E-value=0.9  Score=28.37  Aligned_cols=15  Identities=33%  Similarity=0.689  Sum_probs=12.7

Q ss_pred             Cceeccccccccccc
Q 041414           74 KTHECSVCGLEFAIG   88 (152)
Q Consensus        74 k~~~C~~C~k~F~~~   88 (152)
                      .|-.|+.||..|.-.
T Consensus        25 ~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   25 DPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCccCCCCCCccCcc
Confidence            578899999999876

The function of members of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	152
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	1e-10
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	5e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	7e-04

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 52.4 bits (126), Expect = 1e-10
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 27 RAFECKTCNRQFPSFQALGGHRASHKKSR 55
          R++ C  C R+F S QALGGH   H++ R
Sbjct: 5  RSYTCSFCKREFRSAQALGGHMNVHRRDR 33

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 45.5 bits (108), Expect = 5e-08
 Identities = 15/27 (55%), Positives = 18/27 (66%)

Query: 73 PKTHECSVCGLEFAIGQALGGHMRRHR 99
          P+++ CS C  EF   QALGGHM  HR
Sbjct: 4  PRSYTCSFCKREFRSAQALGGHMNVHR 30

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 35.8 bits (83), Expect = 6e-04
 Identities = 10/70 (14%), Positives = 18/70 (25%), Gaps = 16/70 (22%)

Query: 29 FECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIG 88
           +C+ C        +L  H+  H               +          C  CG  F   
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKH--------------AETVAALR--FPCEFCGKRFEKP 51

Query: 89 QALGGHMRRH 98
           ++  H  + 
Sbjct: 52 DSVAAHRSKS 61

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 36.1 bits (83), Expect = 7e-04
 Identities = 16/74 (21%), Positives = 23/74 (31%), Gaps = 12/74 (16%)

Query: 26 DRAFECKTCNRQFPSFQALGGH-RASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLE 84
            +   K+C+R F +   L  H    H               +Q+       EC   G  
Sbjct: 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGP-----------EQNNHVCYWEECPREGKS 71

Query: 85 FAIGQALGGHMRRH 98
          F     L  H+R H
Sbjct: 72 FKAKYKLVNHIRVH 85

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	152
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.9
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.89
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.87
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.86
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.86
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.86
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.85
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.85
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.84
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.84
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.84
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.82
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.82
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.82
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.82
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.82
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.79
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.78
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.78
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.77
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.77
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.77
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.76
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.75
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.74
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.74
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.74
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.74
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.73
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.73
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.72
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.72
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.71
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.69
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.69
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.67
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.66
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.66
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.65
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.63
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.63
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.61
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.6
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.59
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.59
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.59
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.59
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.58
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.58
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.57
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.57
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.53
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.52
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.52
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.51
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.5
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.49
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.49
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.49
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.49
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.49
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.49
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.49
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.48
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.48
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.48
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.48
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.48
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.48
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.48
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.48
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.48
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.47
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.47
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.47
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.47
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.47
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.47
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.47
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.46
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.45
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.45
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.45
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.45
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.45
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.45
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.44
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.44
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.43
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.43
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.43
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.43
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.42
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.42
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.42
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.42
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.42
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.42
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.41
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.41
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.4
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.4
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.39
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.39
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.39
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.38
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.38
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.37
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.35
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.34
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.34
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.34
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.33
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.33
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.33
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.33
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.33
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.33
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.32
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.32
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.32
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.32
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.31
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.31
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.31
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.31
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.3
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.3
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.29
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.29
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.29
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.29
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.28
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.28
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.28
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.27
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.27
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.27
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.27
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.26
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.26
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.25
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.25
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.22
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.22
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.21
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.21
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.2
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.2
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.19
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.19
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.19
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.18
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.18
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.18
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.17
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.15
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.15
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.15
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.14
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.13
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.12
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.11
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.1
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.1
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.1
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.09
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.09
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.09
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.08
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.07
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.05
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.05
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.05
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.04
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.03
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.01
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	99.01
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.0
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.99
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.99
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.98
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.98
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.98
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.93
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.93
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.92
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.91
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.89
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.89
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.89
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.88
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.85
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.83
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.82
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.81
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.78
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.76
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.76
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.76
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.75
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.75
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.74
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.74
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.73
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.73
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.72
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.71
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.71
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.16
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.16
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.68
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.67
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.66
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.63
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.62
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.61
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.6
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.6
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.6
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.59
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.58
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.98
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.55
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.55
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.55
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.53
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.91
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.88
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.46
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.45
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.41
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.75
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.24
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.19
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.53
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.44
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.31
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.95
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.89
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.25
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.97
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.68
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	91.39
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.0
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	88.7
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	88.29
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	86.39
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	85.24
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	83.47
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	83.09
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	81.64
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	81.46

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=1.1e-24  Score=140.91  Aligned_cols=87  Identities=14%  Similarity=0.211  Sum_probs=81.4

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCCCCceeccccccccccc
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVKPKTHECSVCGLEFAIG   88 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~~k~~~C~~C~k~F~~~   88 (152)
                      .|.++|.|+++|.|++|++.|...+.|..|+++|+++++|.|..|+.         .|+++|++++||.|++||++|...
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence            66788999999999999999999999999999999999999999986         788999999999999999999999


Q ss_pred             hHHHHHHhhccCCCcc
Q 041414           89 QALGGHMRRHRAGASH  104 (152)
Q Consensus        89 ~~L~~H~~~h~~~~~~  104 (152)
                      ..|..|+++|++++|+
T Consensus        92 ~~L~~H~~~hh~~~p~  107 (133)
T 2lt7_A           92 QFMSSHIKSVHSQDPS  107 (133)
T ss_dssp             HHHHHHHHHHTCCCTT
T ss_pred             HHHHHHhHHhcCCCCC
Confidence            9999999999887654

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.90  E-value=1.9e-25  Score=152.21  Aligned_cols=137  Identities=17%  Similarity=0.274  Sum_probs=107.6

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCCC
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVKP   73 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~~   73 (152)
                      .|++.|.....|.  .|+++|.++++|.|++|++.|.....|..|+++|.++++|.|..|+.         .|++.|.++
T Consensus        26 ~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  103 (190)
T 2i13_A           26 ECGKSFSRSDHLA--EHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGE  103 (190)
T ss_dssp             -----CCSSHHHH--HGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTC
T ss_pred             CCccccCCHHHHH--HHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCC
Confidence            6889998888887  89999999999999999999999999999999999999999988876         777888889


Q ss_pred             CceeccccccccccchHHHHHHhhccCCCccc-ccccccccCCCCCcchhhhccCcceeecccCCCCCCCchhhhhcC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRAGASHA-NEKLSAFSSLSDTAPLVEKANSRRVLCLDLNLTPYENDLEFYRLG  150 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~  150 (152)
                      ++|.|..|++.|.....|..|+++|.+++++. ..|++.|.....+..+.+..         .+..||.++++-..|.
T Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H---------~~~~~~~C~~C~~~f~  172 (190)
T 2i13_A          104 KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH---------TGEKPYKCPECGKSFS  172 (190)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH---------HCCCCEECTTTCCEES
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhc---------CCCCCeECCCCCCccC
Confidence            99999999999999999999999999888886 88999888877776665533         2345677766665554

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.89  E-value=2.4e-25  Score=151.77  Aligned_cols=121  Identities=18%  Similarity=0.314  Sum_probs=112.1

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVK   72 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~   72 (152)
                      ..|++.|.....|.  .|+++|.++++|.|++|++.|.....|..|+++|.++++|.|..|+.         .|+++|.+
T Consensus        53 ~~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  130 (190)
T 2i13_A           53 PECGKSFSDKKDLT--RHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG  130 (190)
T ss_dssp             TTTCCEESSHHHHH--HHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHC
T ss_pred             CCcCchhCCHHHHH--HHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCC
Confidence            36899999988888  99999999999999999999999999999999999999999999986         78889999


Q ss_pred             CCceeccccccccccchHHHHHHhhccCCCccc-ccccccccCCCCCcchhhh
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHRAGASHA-NEKLSAFSSLSDTAPLVEK  124 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~  124 (152)
                      +++|.|+.||+.|.....|..|+++|.+++++. ..|++.|.....+..+.+.
T Consensus       131 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~  183 (190)
T 2i13_A          131 EKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT  183 (190)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTT
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHh
Confidence            999999999999999999999999999999987 8999999988777776654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.87  E-value=9.9e-24  Score=143.71  Aligned_cols=121  Identities=18%  Similarity=0.240  Sum_probs=109.2

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceec--CcccccCCChhHHHHHHHhcCCCCCCCCC--CCCc---------ccc-
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFEC--KTCNRQFPSFQALGGHRASHKKSRVTEGS--GGGV---------DTQ-   67 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C--~~C~k~f~~~~~L~~h~~~h~~~~~~~c~--~~~~---------~h~-   67 (152)
                      +.|++.|.....|.  .|+++|+++++|.|  +.|++.|.....|..|+++|.++++|.|.  .|+.         .|+ 
T Consensus        18 ~~C~~~f~~~~~L~--~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~   95 (190)
T 1tf6_A           18 ADCGAAYNKNWKLQ--AHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN   95 (190)
T ss_dssp             TTTCCBCSSHHHHH--HHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHH
T ss_pred             CCCcchhCCHHHHH--HHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHH
Confidence            47999999998888  99999999999999  88999999999999999999999999998  7875         677 


Q ss_pred             ccc-CCCCceec--cccccccccchHHHHHHhhccCCCccc-cc--ccccccCCCCCcchhhh
Q 041414           68 QSP-VKPKTHEC--SVCGLEFAIGQALGGHMRRHRAGASHA-NE--KLSAFSSLSDTAPLVEK  124 (152)
Q Consensus        68 ~~h-~~~k~~~C--~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~--~~~~~~~~~~~~~~~~~  124 (152)
                      +.| .++++|.|  ..||+.|.....|..|+++|.+++++. ..  |++.|.....+..+.+.
T Consensus        96 ~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~  158 (190)
T 1tf6_A           96 RFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV  158 (190)
T ss_dssp             TTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTS
T ss_pred             HhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHH
Confidence            677 57889999  889999999999999999999999998 56  99999998887777654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=1.8e-21  Score=122.45  Aligned_cols=92  Identities=20%  Similarity=0.300  Sum_probs=80.4

Q ss_pred             CCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHh--cCCCCCCC-CCCCCc-----------ccccccCCCCc
Q 041414           10 HGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRAS--HKKSRVTE-GSGGGV-----------DTQQSPVKPKT   75 (152)
Q Consensus        10 ~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~--h~~~~~~~-c~~~~~-----------~h~~~h~~~k~   75 (152)
                      ++..|.  .|+++|++++||.|++|++.|.....|..|+++  |.+.+++. |..|+.           .|+++|.+++|
T Consensus         3 s~~~l~--~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~   80 (115)
T 2dmi_A            3 SGSSGK--LYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV   80 (115)
T ss_dssp             CCCCCC--CCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS
T ss_pred             cchhhh--hheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcc
Confidence            456677  999999999999999999999999999999999  77777654 666542           78889999999


Q ss_pred             eeccccccccccchHHHHHHhhccCCCc
Q 041414           76 HECSVCGLEFAIGQALGGHMRRHRAGAS  103 (152)
Q Consensus        76 ~~C~~C~k~F~~~~~L~~H~~~h~~~~~  103 (152)
                      |.|.+|++.|.....|..|+++|.....
T Consensus        81 ~~C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           81 LKCMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             eECCCCCCccCCHHHHHHHHHHhCCccc
Confidence            9999999999999999999999876543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.86  E-value=2.3e-23  Score=132.72  Aligned_cols=98  Identities=16%  Similarity=0.312  Sum_probs=63.2

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC--CCc---------ccccccC
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG--GGV---------DTQQSPV   71 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~--~~~---------~h~~~h~   71 (152)
                      .|++.|.....|.  .|+++| ++++|.|++|++.|.....|..|+++|.++++|.|..  |+.         .|+++|.
T Consensus        12 ~C~~~f~~~~~l~--~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   88 (124)
T 1ubd_C           12 GCTKMFRDNSAMR--KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHT   88 (124)
T ss_dssp             TCCCEESSHHHHH--HHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCcCccCCHHHHH--HHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhC
Confidence            6788887777777  788887 7778888888888888888888888777765555542  443         4555555


Q ss_pred             CCCceecc--ccccccccchHHHHHHhhccCCCc
Q 041414           72 KPKTHECS--VCGLEFAIGQALGGHMRRHRAGAS  103 (152)
Q Consensus        72 ~~k~~~C~--~C~k~F~~~~~L~~H~~~h~~~~~  103 (152)
                      ++++|.|+  .|++.|.+...|..|+++|+++++
T Consensus        89 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           89 GDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             CCCCCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence            55555553  355555555555555555555443

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.86  E-value=3.3e-22  Score=111.78  Aligned_cols=59  Identities=24%  Similarity=0.563  Sum_probs=55.5

Q ss_pred             CCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhccCCC
Q 041414           25 ADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        25 ~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      .||||.|++||+.|...+.|..|+++|++                   ++||.|.+||++|...+.|.+|+++|+|++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~-------------------ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLG-------------------YRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHT-------------------CCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCC-------------------CcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            48999999999999999999999999987                   789999999999999999999999999985

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=6e-23  Score=135.40  Aligned_cols=121  Identities=16%  Similarity=0.162  Sum_probs=105.5

Q ss_pred             cchhcccCCCCCCCcccccc---ccCCCcceecCcc-----cccCCChhHHHHHHHhcCCCCCCCCCC--CCc-------
Q 041414            2 ANCLMFMPHGGDFDAVNGVN---MAVADRAFECKTC-----NRQFPSFQALGGHRASHKKSRVTEGSG--GGV-------   64 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~---~h~~e~~~~C~~C-----~k~f~~~~~L~~h~~~h~~~~~~~c~~--~~~-------   64 (152)
                      ..|++.|.+...|.  .|++   +|.++++|.|++|     ++.|.....|..|+++|.++++|.|..  |+.       
T Consensus         7 ~~C~~~f~~~~~L~--~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   84 (155)
T 2gli_A            7 DGCSQEFDSQEQLV--HHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLEN   84 (155)
T ss_dssp             TTCCCBCSCHHHHH--HHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHH
T ss_pred             CCCccccCCHHHHH--HHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHH
Confidence            46999999998888  9998   7999999998753     499999999999999999999999974  765       


Q ss_pred             --ccccccCCCCceeccc--cccccccchHHHHHH-hhccCCCccc-cc--ccccccCCCCCcchhhh
Q 041414           65 --DTQQSPVKPKTHECSV--CGLEFAIGQALGGHM-RRHRAGASHA-NE--KLSAFSSLSDTAPLVEK  124 (152)
Q Consensus        65 --~h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~-~~h~~~~~~~-~~--~~~~~~~~~~~~~~~~~  124 (152)
                        .|++.|.++++|.|+.  |++.|.+...|..|+ ++|.+++++. ..  |++.|.....+..+++.
T Consensus        85 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  152 (155)
T 2gli_A           85 LKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT  152 (155)
T ss_dssp             HHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHh
Confidence              7888999999999998  999999999999998 7899999987 55  99999887766665543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.85  E-value=6.6e-23  Score=129.54  Aligned_cols=93  Identities=18%  Similarity=0.384  Sum_probs=52.3

Q ss_pred             hhcccCCCCCCCccccccccCCCcceecC--cccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceecccc
Q 041414            4 CLMFMPHGGDFDAVNGVNMAVADRAFECK--TCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVC   81 (152)
Q Consensus         4 C~~~~~~~~~~~~~~h~~~h~~e~~~~C~--~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C   81 (152)
                      |++.|.....|.  .|+++|.++++|.|+  .|++.|.....|..|+++|.+                   +++|.|.+|
T Consensus        14 C~~~f~~~~~l~--~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~C   72 (119)
T 2jp9_A           14 CNKRYFKLSHLQ--MHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG-------------------VKPFQCKTC   72 (119)
T ss_dssp             SCCCBSCHHHHH--HHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHC-------------------CCCEECTTT
T ss_pred             CcchhCCHHHHH--HHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCC-------------------CCCccCCcc
Confidence            555555555555  555555555555555  455555555555555555555                   555566666


Q ss_pred             ccccccchHHHHHHhhccCCCcccc---cccccccCCCC
Q 041414           82 GLEFAIGQALGGHMRRHRAGASHAN---EKLSAFSSLSD  117 (152)
Q Consensus        82 ~k~F~~~~~L~~H~~~h~~~~~~~~---~~~~~~~~~~~  117 (152)
                      ++.|.....|..|+++|.+++++..   .|++.|.....
T Consensus        73 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~  111 (119)
T 2jp9_A           73 QRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDE  111 (119)
T ss_dssp             CCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHH
T ss_pred             CchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHH
Confidence            6666666666666665555555542   45555554433

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=2.4e-22  Score=127.71  Aligned_cols=103  Identities=18%  Similarity=0.227  Sum_probs=53.2

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccc
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCG   82 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~   82 (152)
                      .|++.|.....|.  .|+++|.++++|.|++|++.|.....|..|++.+.                .+.++++|.|.+|+
T Consensus        12 ~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~----------------~~~~~~~~~C~~C~   73 (124)
T 2dlq_A           12 TCHKKFLSKYYLK--VHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNC----------------MNRSEQVFTCSVCQ   73 (124)
T ss_dssp             TTCCCCSSHHHHH--HHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCC----------------CCSCCCCEECSSSC
T ss_pred             CCCCcCCCHHHHH--HHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhh----------------cCCCCCCeECCCCC
Confidence            3555555555554  55555555555555555555555555555555320                12344555555555


Q ss_pred             cccccchHHHHHHhhccCCCccc-ccccccccCCCCCcchhh
Q 041414           83 LEFAIGQALGGHMRRHRAGASHA-NEKLSAFSSLSDTAPLVE  123 (152)
Q Consensus        83 k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~  123 (152)
                      +.|.....|..|+++|.+++++. ..|++.|.....+..+++
T Consensus        74 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           74 ETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             CEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHH
Confidence            55555555555555555555544 455555555444444433

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.84  E-value=1.9e-22  Score=133.16  Aligned_cols=99  Identities=20%  Similarity=0.236  Sum_probs=46.8

Q ss_pred             hhcccCCCCCCCccccccc-cCCCcc--------eecCcccccCCChhHHHHHHHhcCCCCCCCCCC--CCc--------
Q 041414            4 CLMFMPHGGDFDAVNGVNM-AVADRA--------FECKTCNRQFPSFQALGGHRASHKKSRVTEGSG--GGV--------   64 (152)
Q Consensus         4 C~~~~~~~~~~~~~~h~~~-h~~e~~--------~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~--~~~--------   64 (152)
                      |++.|.....|.  .|+++ |.++.+        |.|.+|++.|.....|..|+++|.++++|.|..  |+.        
T Consensus        31 C~~~f~~~~~L~--~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L  108 (155)
T 2rpc_A           31 CDRTFSTMHELV--THVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENL  108 (155)
T ss_dssp             CCCCBSSHHHHH--HHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHH
T ss_pred             CCcccCCHHHHH--HHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHH
Confidence            444444444444  44443 444332        445555555555555555555554444444443  433        


Q ss_pred             -ccccccCCCCceeccc--cccccccchHHHHHHhhccCCCcc
Q 041414           65 -DTQQSPVKPKTHECSV--CGLEFAIGQALGGHMRRHRAGASH  104 (152)
Q Consensus        65 -~h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~~~~  104 (152)
                       .|+++|.++++|.|.+  |++.|.....|.+|+++|+++++|
T Consensus       109 ~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~  151 (155)
T 2rpc_A          109 KIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSG  151 (155)
T ss_dssp             HHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCS
T ss_pred             HHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence             3444444444444443  444454444444444444444443

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.84  E-value=2.3e-22  Score=136.92  Aligned_cols=119  Identities=17%  Similarity=0.180  Sum_probs=104.3

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecC--cccccCCChhHHHHHH-Hhc-CCCCCCCC--CCCCc---------cc
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECK--TCNRQFPSFQALGGHR-ASH-KKSRVTEG--SGGGV---------DT   66 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~--~C~k~f~~~~~L~~h~-~~h-~~~~~~~c--~~~~~---------~h   66 (152)
                      ..|++.|.....|.  .|+++|.++++|.|+  .|++.|.....|..|+ +.| .+.++|.|  ..|+.         .|
T Consensus        48 ~~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H  125 (190)
T 1tf6_A           48 EGCEKGFTSLHHLT--RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVH  125 (190)
T ss_dssp             TTCCCCCSSHHHHH--HHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHH
T ss_pred             CCCChhhCCHHHHH--HHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHH
Confidence            46999999998888  999999999999999  8999999999999999 667 46788999  77876         88


Q ss_pred             ccccCCCCceeccc--cccccccchHHHHHHhhccCCCccccc---ccccccCCCCCcchhhh
Q 041414           67 QQSPVKPKTHECSV--CGLEFAIGQALGGHMRRHRAGASHANE---KLSAFSSLSDTAPLVEK  124 (152)
Q Consensus        67 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~~~~~~~---~~~~~~~~~~~~~~~~~  124 (152)
                      +++|.+++||.|+.  |++.|.....|..|+++|++  ..+..   |++.|.....+..+++.
T Consensus       126 ~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~--~~C~~~~~C~~~f~~~~~l~~H~~~  186 (190)
T 1tf6_A          126 QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYLKHVAE  186 (190)
T ss_dssp             HGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS--CCCCSTTTCCCCCSCHHHHHHHHTT
T ss_pred             HHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC--CcCCCCCcCCCccccHHHHHHHHHh
Confidence            99999999999988  99999999999999999998  33466   99999887666665543

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=6.7e-21  Score=120.97  Aligned_cols=99  Identities=21%  Similarity=0.279  Sum_probs=82.0

Q ss_pred             CCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhh---ccC
Q 041414           24 VADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRR---HRA  100 (152)
Q Consensus        24 ~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~---h~~  100 (152)
                      +++++|.|++|++.|.....|..|+++|.+                   +++|.|..|++.|.....|..|++.   |.+
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~   63 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTG-------------------EKPFECPKCGKCYFRKENLLEHEARNCMNRS   63 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSS-------------------CCSCBCTTTCCBCSSHHHHHHHHHHCCCCSC
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCC-------------------CCCeECCCCCchhcCHHHHHHHHhhhhcCCC
Confidence            578999999999999999999999999876                   6789999999999999999999985   567


Q ss_pred             CCccc-ccccccccCCCCCcchhhhccCcceeecccCCCCCCCchhhhhcC
Q 041414          101 GASHA-NEKLSAFSSLSDTAPLVEKANSRRVLCLDLNLTPYENDLEFYRLG  150 (152)
Q Consensus       101 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~  150 (152)
                      ++++. ..|++.|.....+..+....         ....||.++++-..|.
T Consensus        64 ~~~~~C~~C~~~f~~~~~l~~H~~~h---------~~~~~~~C~~C~~~f~  105 (124)
T 2dlq_A           64 EQVFTCSVCQETFRRRMELRLHMVSH---------TGEMPYKCSSCSQQFM  105 (124)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHH---------SSSCSEECSSSCCEES
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHc---------CCCCCccCCCccchhC
Confidence            77776 89999999887777766543         3345677776665554

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=1.4e-20  Score=117.00  Aligned_cols=86  Identities=15%  Similarity=0.287  Sum_probs=78.4

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCCCCceeccccccccccc
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVKPKTHECSVCGLEFAIG   88 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~~k~~~C~~C~k~F~~~   88 (152)
                      .++++|+++++|.|.+|++.|.....|..|+++|.  ++|.|..|+.         .|+. |.++++|.|.+|++.|...
T Consensus         6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             ccCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            67789999999999999999999999999999994  6899998876         6775 9999999999999999999


Q ss_pred             hHHHHHHh-hccCCCcccc
Q 041414           89 QALGGHMR-RHRAGASHAN  106 (152)
Q Consensus        89 ~~L~~H~~-~h~~~~~~~~  106 (152)
                      ..|..|++ +|.+++++..
T Consensus        83 ~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHHHHHHTSCCCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCCCC
Confidence            99999997 8999988764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=2.4e-21  Score=127.66  Aligned_cols=95  Identities=14%  Similarity=0.225  Sum_probs=87.9

Q ss_pred             hhcccCCCCCCCccccccccCCCcceecCc--ccccCCChhHHHHHHHhcCCCCCCCCCC--CCc---------ccc-cc
Q 041414            4 CLMFMPHGGDFDAVNGVNMAVADRAFECKT--CNRQFPSFQALGGHRASHKKSRVTEGSG--GGV---------DTQ-QS   69 (152)
Q Consensus         4 C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~--C~k~f~~~~~L~~h~~~h~~~~~~~c~~--~~~---------~h~-~~   69 (152)
                      |++.|.....|.  .|+++|++++||.|++  |++.|.....|..|+++|.++++|.|..  |+.         .|+ +.
T Consensus        45 c~~~f~~~~~l~--~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~  122 (155)
T 2gli_A           45 ELRPFKAQYMLV--VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT  122 (155)
T ss_dssp             TTCCCSSHHHHH--HHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHT
T ss_pred             hhhhhhhHHHHH--HHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHh
Confidence            568898888887  9999999999999986  9999999999999999999999999997  775         787 79


Q ss_pred             cCCCCceeccc--cccccccchHHHHHHhhccC
Q 041414           70 PVKPKTHECSV--CGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        70 h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~  100 (152)
                      |.++++|.|.+  |++.|.....|..|+++|+|
T Consensus       123 H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          123 HSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             cCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            99999999998  99999999999999999875

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.82  E-value=2.7e-21  Score=122.09  Aligned_cols=83  Identities=24%  Similarity=0.402  Sum_probs=74.7

Q ss_pred             cCCCcceecCc--ccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceecc--ccccccccchHHHHHHhhc
Q 041414           23 AVADRAFECKT--CNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECS--VCGLEFAIGQALGGHMRRH   98 (152)
Q Consensus        23 h~~e~~~~C~~--C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~h   98 (152)
                      ++++++|.|.+  |++.|.....|..|+++|.+                   +++|.|.  .|++.|.....|..|+++|
T Consensus         1 a~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h   61 (119)
T 2jp9_A            1 ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTG-------------------EKPYQCDFKDCERRFSRSDQLKRHQRRH   61 (119)
T ss_dssp             CCSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHT-------------------TCCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCCCeeeeCCCCCCcchhCCHHHHHHHHHhhCC-------------------CCCccCCCCCCcCccCCHHHHHHHHHHc
Confidence            36789999997  99999999999999998876                   6789999  7999999999999999999


Q ss_pred             cCCCccc-ccccccccCCCCCcchhhh
Q 041414           99 RAGASHA-NEKLSAFSSLSDTAPLVEK  124 (152)
Q Consensus        99 ~~~~~~~-~~~~~~~~~~~~~~~~~~~  124 (152)
                      .+++++. ..|++.|.....+..+.+.
T Consensus        62 ~~~~~~~C~~C~~~f~~~~~l~~H~~~   88 (119)
T 2jp9_A           62 TGVKPFQCKTCQRKFSRSDHLKTHTRT   88 (119)
T ss_dssp             HCCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCCCCccCCccCchhCCHHHHHHHHHH
Confidence            9999887 8999999998877777654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.82  E-value=3.8e-20  Score=114.66  Aligned_cols=84  Identities=25%  Similarity=0.345  Sum_probs=77.6

Q ss_pred             ccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCCCCceeccccccccccchHHH
Q 041414           22 MAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVKPKTHECSVCGLEFAIGQALG   92 (152)
Q Consensus        22 ~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~~k~~~C~~C~k~F~~~~~L~   92 (152)
                      ...++++|.|.+|++.|.....|..|+++|.++++|.|..|+.         .|+++|.++++|.|.+|++.|.....|.
T Consensus        11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           11 PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             CcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            3467889999999999999999999999999999999998876         7889999999999999999999999999


Q ss_pred             HHHhhccCCCccc
Q 041414           93 GHMRRHRAGASHA  105 (152)
Q Consensus        93 ~H~~~h~~~~~~~  105 (152)
                      .|+++|.+++++.
T Consensus        91 ~H~~~H~~~~~~~  103 (106)
T 2ee8_A           91 VHKTLHMQTSSPT  103 (106)
T ss_dssp             HHHHHTTSCCCCC
T ss_pred             HHHHHhCCCCCCc
Confidence            9999999998764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=2.3e-20  Score=113.58  Aligned_cols=82  Identities=15%  Similarity=0.293  Sum_probs=65.3

Q ss_pred             cCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCCCCceeccccccccccchHHHH
Q 041414           23 AVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVKPKTHECSVCGLEFAIGQALGG   93 (152)
Q Consensus        23 h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~~k~~~C~~C~k~F~~~~~L~~   93 (152)
                      +.+++||.|.+|++.|.....|..|+++|.++++|.|..|+.         .|++.|.++++|.|.+|++.|.....|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            456677777777777777777777777777777777776664         56667777899999999999999999999


Q ss_pred             HHhhccCCCcc
Q 041414           94 HMRRHRAGASH  104 (152)
Q Consensus        94 H~~~h~~~~~~  104 (152)
                      |+++|+++++.
T Consensus        83 H~~~h~~~~~p   93 (96)
T 2dmd_A           83 HLRSHTGDSGP   93 (96)
T ss_dssp             HHTTCCSCCCC
T ss_pred             HHHHhcCCCCC
Confidence            99999988653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=7.1e-21  Score=114.53  Aligned_cols=79  Identities=23%  Similarity=0.523  Sum_probs=57.1

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccc
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCG   82 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~   82 (152)
                      .|++.|.....|.  .|+++|.++++|.|++|++.|.....|..|+++|.+                   +++|.|.+|+
T Consensus        11 ~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~C~   69 (90)
T 1a1h_A           11 SCDRRFSQSGSLT--RHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG-------------------EKPFACDICG   69 (90)
T ss_dssp             SCCCEESSHHHHH--HHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC-------------------CCCEECTTTC
T ss_pred             CCCCccCCHHHHH--HHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCC-------------------CCCccCCCCC
Confidence            4666666655555  666666666666666666666666666666665554                   7899999999


Q ss_pred             cccccchHHHHHHhhccCCC
Q 041414           83 LEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        83 k~F~~~~~L~~H~~~h~~~~  102 (152)
                      +.|.....|..|+++|++++
T Consensus        70 ~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           70 RKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CEESSHHHHHHHHGGGGC--
T ss_pred             chhCCHHHHHHHHHHhcccC
Confidence            99999999999999999875

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.79  E-value=2.2e-19  Score=114.09  Aligned_cols=100  Identities=21%  Similarity=0.353  Sum_probs=89.6

Q ss_pred             CCcceecC--cccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCCCCceeccc--cccccccchHH
Q 041414           25 ADRAFECK--TCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVKPKTHECSV--CGLEFAIGQAL   91 (152)
Q Consensus        25 ~e~~~~C~--~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~~k~~~C~~--C~k~F~~~~~L   91 (152)
                      ++++|.|+  .|++.|.....|..|+++| +.++|.|..|+.         .|++.|.++++|.|..  |++.|.....|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            46899999  8999999999999999999 889999999986         8899999999999986  99999999999


Q ss_pred             HHHHhhccCCCcccc---cccccccCCCCCcchhhhc
Q 041414           92 GGHMRRHRAGASHAN---EKLSAFSSLSDTAPLVEKA  125 (152)
Q Consensus        92 ~~H~~~h~~~~~~~~---~~~~~~~~~~~~~~~~~~~  125 (152)
                      ..|+++|.+++++..   .|++.|.....+..+.+..
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  117 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH  117 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHH
Confidence            999999999999884   5999999999998887654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=6.7e-19  Score=104.92  Aligned_cols=80  Identities=16%  Similarity=0.332  Sum_probs=69.6

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhh
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      .|+++|++++||.|.+|++.|.....|..|+++|.....               .+++|.|.+|++.|.....|..|+++
T Consensus         5 ~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~---------------~~~~~~C~~C~~~f~~~~~L~~H~~~   69 (86)
T 1x6h_A            5 SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF---------------VPAAFVCSKCGKTFTRRNTMARHADN   69 (86)
T ss_dssp             CCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSC---------------CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             cccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcC---------------CCcceECCCCCChhCCHHHHHHHHHH
Confidence            899999999999999999999999999999988765321               14789999999999999999999999


Q ss_pred             ccCCCccc-ccccccc
Q 041414           98 HRAGASHA-NEKLSAF  112 (152)
Q Consensus        98 h~~~~~~~-~~~~~~~  112 (152)
                      |.+++++. ..|+.++
T Consensus        70 h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           70 CAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CCCCCSCCCCCCCCCC
T ss_pred             ccCCCCcccCCCCCCC
Confidence            99998876 5665543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.78  E-value=2.2e-20  Score=110.37  Aligned_cols=77  Identities=23%  Similarity=0.496  Sum_probs=65.5

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccc
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCG   82 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~   82 (152)
                      .|++.|.....|.  .|+++|.++++|.|++|++.|.....|..|+++|.+                   +++|.|..|+
T Consensus         6 ~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~C~   64 (82)
T 2kmk_A            6 ICGKSFKRSSTLS--THLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG-------------------EKPHKCQVCG   64 (82)
T ss_dssp             SSCCEESSHHHHH--HHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHT-------------------CCCEECTTTS
T ss_pred             CCcccccCchhHH--HHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcC-------------------CCCCcCCCcc
Confidence            5788888777777  888888888888888888888888888888887765                   6789999999


Q ss_pred             cccccchHHHHHHhhccC
Q 041414           83 LEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        83 k~F~~~~~L~~H~~~h~~  100 (152)
                      +.|.....|..|+++|+|
T Consensus        65 ~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           65 KAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             CEESSHHHHHHHHHHHC-
T ss_pred             hhhCChHHHHHHHHhhCC
Confidence            999999999999999875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.77  E-value=1.7e-19  Score=110.59  Aligned_cols=80  Identities=18%  Similarity=0.202  Sum_probs=70.7

Q ss_pred             cccCCCCCCCccccccccCCCcceecCcccccCC-ChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccc
Q 041414            6 MFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFP-SFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLE   84 (152)
Q Consensus         6 ~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~-~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~   84 (152)
                      ..++....+.  .|+++|+++++|.|++|++.|. ....|..|+++|++.                  +++|.|.+|++.
T Consensus         4 ~s~~~~~~~~--~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~------------------~~~~~C~~C~k~   63 (98)
T 2gqj_A            4 GSSGPGGPEE--QWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKL------------------QDALKCQHCRKQ   63 (98)
T ss_dssp             CCCCCCCSCS--HHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHH------------------HHHHSCSSSCCC
T ss_pred             CCCCCCCcHH--HHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCC------------------CCCEECCCCCCc
Confidence            3455666666  9999999999999999999999 999999999988651                  568999999999


Q ss_pred             cccchHHHHHHhhccCCCccc
Q 041414           85 FAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        85 F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      |.....|.+|+++|+++++..
T Consensus        64 F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           64 FKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CSCHHHHHHHHHHHSCSCSSC
T ss_pred             cCCHHHHHHHHHHHcCCCCCC
Confidence            999999999999999998754

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=4e-19  Score=110.75  Aligned_cols=79  Identities=18%  Similarity=0.308  Sum_probs=72.9

Q ss_pred             ccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCCCCceeccccccccccchHHH
Q 041414           22 MAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVKPKTHECSVCGLEFAIGQALG   92 (152)
Q Consensus        22 ~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~~k~~~C~~C~k~F~~~~~L~   92 (152)
                      .|+++++|.| .|++.|.....|..|+++|.++++|.|..|+.         .|+++|.++++|.|.+|++.|.....|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            6889999999 99999999999999999999999999998876         7888999999999999999999999999


Q ss_pred             HHHhhccCC
Q 041414           93 GHMRRHRAG  101 (152)
Q Consensus        93 ~H~~~h~~~  101 (152)
                      +|+++|...
T Consensus        83 ~H~~~~~~~   91 (110)
T 2csh_A           83 RHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHcccc
Confidence            999988754

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.77  E-value=1.7e-20  Score=121.14  Aligned_cols=84  Identities=15%  Similarity=0.171  Sum_probs=76.2

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCCC
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVKP   73 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~~   73 (152)
                      .|++.|.....|.  .|+++|++++||.|++|++.|.....|..|+++|++++||.|..|+.         .|+++|.++
T Consensus        27 ~C~k~F~~~~~L~--~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~  104 (133)
T 2lt7_A           27 VCKRSYVCLTSLR--RHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQ  104 (133)
T ss_dssp             TTCCEESCHHHHH--HHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCcCCHHHHH--HHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence            6999999999988  99999999999999999999999999999999999999999999986         777777655


Q ss_pred             ------Cceeccccccccccc
Q 041414           74 ------KTHECSVCGLEFAIG   88 (152)
Q Consensus        74 ------k~~~C~~C~k~F~~~   88 (152)
                            ++|+|..|++.|...
T Consensus       105 ~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A          105 DPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             CTTSSSCCEEECCCCSSCCCC
T ss_pred             CCCCCCCCeecCCCCchhhhc
Confidence                  469999999988743

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=7.9e-19  Score=106.54  Aligned_cols=77  Identities=23%  Similarity=0.422  Sum_probs=47.6

Q ss_pred             CCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCCC--CceeccccccccccchHHHH
Q 041414           25 ADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVKP--KTHECSVCGLEFAIGQALGG   93 (152)
Q Consensus        25 ~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~~--k~~~C~~C~k~F~~~~~L~~   93 (152)
                      ++++|.|.+|++.|.....|..|+++|.++++|.|..|+.         .|++.|.++  ++|.|.+|++.|.....|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            4445555555555555555555555554444444444432         333444444  78999999999999999999


Q ss_pred             HHh-hccCC
Q 041414           94 HMR-RHRAG  101 (152)
Q Consensus        94 H~~-~h~~~  101 (152)
                      |++ +|.++
T Consensus        84 H~~~~H~~~   92 (95)
T 2yt9_A           84 HIKQVHSGP   92 (95)
T ss_dssp             HHHHTSCCC
T ss_pred             HHHHhcCCC
Confidence            986 68765

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.7e-18  Score=100.10  Aligned_cols=67  Identities=25%  Similarity=0.527  Sum_probs=61.5

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhh
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      .+.++|++++||.|++|++.|.....|..|+++|.+                   +++|.|.+|++.|.....|.+|+++
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~-------------------~~~~~C~~C~~~f~~~~~L~~H~~~   64 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTG-------------------EKPYKCLECGKAFSQNSGLINHQRI   64 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGC-------------------SCCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCC-------------------CCCeECCCCCcccCCHHHHHHHHHh
Confidence            456799999999999999999999999999998876                   6789999999999999999999999


Q ss_pred             ccCCCc
Q 041414           98 HRAGAS  103 (152)
Q Consensus        98 h~~~~~  103 (152)
                      |+++.+
T Consensus        65 H~~~~~   70 (72)
T 1x6e_A           65 HTSGPS   70 (72)
T ss_dssp             HHSSSS
T ss_pred             cCCCCC
Confidence            998743

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.74  E-value=2.9e-18  Score=99.59  Aligned_cols=65  Identities=26%  Similarity=0.568  Sum_probs=60.0

Q ss_pred             cccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhccC
Q 041414           21 NMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~  100 (152)
                      ..++++++|.|.+|++.|.....|..|+++|.+                   +++|.|.+|++.|.....|.+|+++|++
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~-------------------~~~~~C~~C~k~f~~~~~L~~H~~~H~~   70 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTG-------------------EKPYRCNICGAQFNRPANLKTHTRIHSG   70 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCC-------------------CCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCC-------------------CCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence            367889999999999999999999999999876                   6789999999999999999999999999


Q ss_pred             CCcc
Q 041414          101 GASH  104 (152)
Q Consensus       101 ~~~~  104 (152)
                      ++||
T Consensus        71 ~kp~   74 (74)
T 2lce_A           71 EKPY   74 (74)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            9875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=6.5e-18  Score=98.84  Aligned_cols=66  Identities=20%  Similarity=0.430  Sum_probs=59.4

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHH-hcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHh
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRA-SHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMR   96 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~-~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~   96 (152)
                      .|+++|++++||.|++|++.|.....|..|++ .|.+.                  +++|.|++|++.|.....|..|++
T Consensus         5 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~------------------~~~~~C~~C~~~f~~~~~L~~H~~   66 (77)
T 2ct1_A            5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN------------------VAKFHCPHCDTVIARKSDLGVHLR   66 (77)
T ss_dssp             CCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS------------------CSSEECSSSSCEESSHHHHHHHHH
T ss_pred             ccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCC------------------CCccCCCCCCCccCCHHHHHHHHH
Confidence            89999999999999999999999999999997 56542                  478999999999999999999999


Q ss_pred             hccCC
Q 041414           97 RHRAG  101 (152)
Q Consensus        97 ~h~~~  101 (152)
                      +|.+.
T Consensus        67 ~~H~~   71 (77)
T 2ct1_A           67 KQHSY   71 (77)
T ss_dssp             HTSCC
T ss_pred             HhCCC
Confidence            85544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.74  E-value=1.4e-18  Score=114.42  Aligned_cols=102  Identities=24%  Similarity=0.307  Sum_probs=88.6

Q ss_pred             ccCCCcceecCcccccCCChhHHHHHHHh-cCCCCC--------CCCCCCCc---------ccccccCCCCceeccc--c
Q 041414           22 MAVADRAFECKTCNRQFPSFQALGGHRAS-HKKSRV--------TEGSGGGV---------DTQQSPVKPKTHECSV--C   81 (152)
Q Consensus        22 ~h~~e~~~~C~~C~k~f~~~~~L~~h~~~-h~~~~~--------~~c~~~~~---------~h~~~h~~~k~~~C~~--C   81 (152)
                      +..++.+|.|.+|++.|.....|..|+++ |.+..+        +.|..|+.         .|++.|.++++|.|..  |
T Consensus        19 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   98 (155)
T 2rpc_A           19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGC   98 (155)
T ss_dssp             CCTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTT
T ss_pred             echhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCC
Confidence            45677899999999999999999999997 777654        67888775         7889999999999998  9


Q ss_pred             ccccccchHHHHHHhhccCCCccccc---ccccccCCCCCcchhh
Q 041414           82 GLEFAIGQALGGHMRRHRAGASHANE---KLSAFSSLSDTAPLVE  123 (152)
Q Consensus        82 ~k~F~~~~~L~~H~~~h~~~~~~~~~---~~~~~~~~~~~~~~~~  123 (152)
                      ++.|.....|..|+++|.+++++...   |++.|.....+..+++
T Consensus        99 ~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~  143 (155)
T 2rpc_A           99 GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH  143 (155)
T ss_dssp             CCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSST
T ss_pred             CCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHH
Confidence            99999999999999999999999843   9999988766666544

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.74  E-value=5.1e-19  Score=106.09  Aligned_cols=76  Identities=20%  Similarity=0.469  Sum_probs=63.0

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecC--cccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccc
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECK--TCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSV   80 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~--~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~   80 (152)
                      .|++.|.....|.  .|+++|.++++|.|+  .|++.|.....|..|+++|.+                   +++|.|++
T Consensus        12 ~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~   70 (89)
T 2wbs_A           12 GCGKTYTKSSHLK--AHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG-------------------HRPFQCQK   70 (89)
T ss_dssp             TTCCEESSHHHHH--HHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHC-------------------CCCEECSS
T ss_pred             CCCCcCCCHHHHH--HHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCC-------------------CCCccCCC
Confidence            4788887777777  888888888888886  488888888888888877765                   67899999


Q ss_pred             cccccccchHHHHHHhhcc
Q 041414           81 CGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        81 C~k~F~~~~~L~~H~~~h~   99 (152)
                      |++.|.....|..|+++|.
T Consensus        71 C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           71 CDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             SSCEESSHHHHHHHGGGGC
T ss_pred             CCcccCCHHHHHHHHHhhC
Confidence            9999999999999999884

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.73  E-value=6.4e-19  Score=107.85  Aligned_cols=76  Identities=22%  Similarity=0.437  Sum_probs=58.0

Q ss_pred             CCcceecCc--ccccCCChhHHHHHHHhcCCCCCCCCC--CCCc---------ccccccCCCCceeccccccccccchHH
Q 041414           25 ADRAFECKT--CNRQFPSFQALGGHRASHKKSRVTEGS--GGGV---------DTQQSPVKPKTHECSVCGLEFAIGQAL   91 (152)
Q Consensus        25 ~e~~~~C~~--C~k~f~~~~~L~~h~~~h~~~~~~~c~--~~~~---------~h~~~h~~~k~~~C~~C~k~F~~~~~L   91 (152)
                      .+++|.|.+  |++.|.....|..|+++|.++++|.|.  .|+.         .|+++|.++++|.|.+|++.|.....|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            455677775  777777777777777777777776664  3543         566667778899999999999999999


Q ss_pred             HHHHhhccC
Q 041414           92 GGHMRRHRA  100 (152)
Q Consensus        92 ~~H~~~h~~  100 (152)
                      ..|+++|.+
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            999998864

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=6.3e-18  Score=97.11  Aligned_cols=65  Identities=20%  Similarity=0.369  Sum_probs=60.1

Q ss_pred             ccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhccCC
Q 041414           22 MAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        22 ~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      .|+++++|.|++|++.|.....|..|+++|.+                   +++|.|.+|++.|.....|..|+++|+++
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-------------------~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   63 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCT-------------------DRPFKCNYCSFDTKQPSNLSKHMKKFHGD   63 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCC-------------------SCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCC-------------------CCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence            57899999999999999999999999998876                   67899999999999999999999999998


Q ss_pred             Cccc
Q 041414          102 ASHA  105 (152)
Q Consensus       102 ~~~~  105 (152)
                      ++..
T Consensus        64 ~p~p   67 (70)
T 1x5w_A           64 MSGP   67 (70)
T ss_dssp             SCCS
T ss_pred             CCCC
Confidence            7754

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.4e-17  Score=97.39  Aligned_cols=69  Identities=26%  Similarity=0.511  Sum_probs=62.4

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhh
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      .+...+.++++|.|++|++.|.....|..|+++|.+                   +++|.|.+|++.|.....|.+|+++
T Consensus         8 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~C~~~f~~~~~L~~H~~~   68 (77)
T 2cot_A            8 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG-------------------EKPYKCDECGKAFIQRSHLIGHHRV   68 (77)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC-------------------SCSEECSSSCCEESSHHHHHHHGGG
T ss_pred             CCcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCC-------------------CcCeeCCCCCCccCCHHHHHHHHHH
Confidence            444567889999999999999999999999988876                   6789999999999999999999999


Q ss_pred             ccCCCccc
Q 041414           98 HRAGASHA  105 (152)
Q Consensus        98 h~~~~~~~  105 (152)
                      |+++++|.
T Consensus        69 H~~~~p~~   76 (77)
T 2cot_A           69 HTGSGPSS   76 (77)
T ss_dssp             SCCCCCCC
T ss_pred             hCCCCCCC
Confidence            99998864

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.72  E-value=1.3e-17  Score=99.45  Aligned_cols=65  Identities=18%  Similarity=0.357  Sum_probs=58.2

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHH-h
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHM-R   96 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~   96 (152)
                      ..+.++.++++|.|++|++.|.....|..|+++|++                   ++||.|.+|+++|.....|.+|+ +
T Consensus        18 ~~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~-------------------~k~~~C~~C~k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           18 GVLGLSASAECHLCPVCGESFASKGAQERHLRLLHA-------------------AQVFPCKYCPATFYSSPGLTRHINK   78 (85)
T ss_dssp             SCCSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSC-------------------SSSEECTTSSCEESSHHHHHHHHHT
T ss_pred             CCCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccC-------------------CCccCCCCCCCEeCCHHHHHHhCcc
Confidence            344567888999999999999999999999998876                   78999999999999999999997 5


Q ss_pred             hccCC
Q 041414           97 RHRAG  101 (152)
Q Consensus        97 ~h~~~  101 (152)
                      +|.+|
T Consensus        79 ~H~~E   83 (85)
T 2lv2_A           79 CHPSE   83 (85)
T ss_dssp             TCTTC
T ss_pred             cCcCC
Confidence            68876

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=2.9e-18  Score=104.70  Aligned_cols=74  Identities=19%  Similarity=0.272  Sum_probs=64.6

Q ss_pred             ccCCCCCCCccccccccCCCcceecCcccccC-CChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceecccccccc
Q 041414            7 FMPHGGDFDAVNGVNMAVADRAFECKTCNRQF-PSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEF   85 (152)
Q Consensus         7 ~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f-~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F   85 (152)
                      .|+....+.  .|+++|.++++|.|++|++.| ....+|..|+++| +                   +++|.|.+||+.|
T Consensus        15 ~~~~~~~~~--~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~-------------------~k~~~C~~Cgk~F   72 (96)
T 2ctd_A           15 VYAAGSLEE--QWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-K-------------------QEMFTCHHCGKQL   72 (96)
T ss_dssp             SSCTTCHHH--HHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-C-------------------CCCCCCSSSCCCC
T ss_pred             CCCCchHHH--HHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-C-------------------CCCeECCCCCCee
Confidence            344444455  788899999999999999999 9999999999998 6                   6789999999999


Q ss_pred             ccchHHHHH-HhhccCCC
Q 041414           86 AIGQALGGH-MRRHRAGA  102 (152)
Q Consensus        86 ~~~~~L~~H-~~~h~~~~  102 (152)
                      .....|..| +++|+++.
T Consensus        73 ~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           73 RSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             SSHHHHHHHHHHHTCCCS
T ss_pred             CCHHHHHHHhHHhcCCCC
Confidence            999999999 89998653

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=2e-17  Score=93.79  Aligned_cols=63  Identities=21%  Similarity=0.461  Sum_probs=56.3

Q ss_pred             ccccCCCcceecCcccccCCChhHHHHHHHh-cCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhc
Q 041414           20 VNMAVADRAFECKTCNRQFPSFQALGGHRAS-HKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRH   98 (152)
Q Consensus        20 ~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~-h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h   98 (152)
                      +++|++++||.|++|++.|.....|..|+++ |..                  ++++|.|+.|++.|.....|..|+++|
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~------------------~~~~~~C~~C~k~f~~~~~L~~H~~~~   63 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKR------------------NVKVYPCPFCFKEFTRKDNMTAHVKII   63 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSS------------------SCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCC------------------CCcCeECCCCCCccCCHHHHHHHHHHH
Confidence            3689999999999999999999999999987 521                  268999999999999999999999998


Q ss_pred             cC
Q 041414           99 RA  100 (152)
Q Consensus        99 ~~  100 (152)
                      ++
T Consensus        64 H~   65 (66)
T 2drp_A           64 HK   65 (66)
T ss_dssp             TC
T ss_pred             cC
Confidence            75

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=5.8e-17  Score=95.00  Aligned_cols=72  Identities=24%  Similarity=0.430  Sum_probs=65.3

Q ss_pred             cCCCcceecCc--ccccCCChhHHHHHHH-hcCCCCCCCCCCCCcccccccCCCCceeccc--cccccccchHHHHHHhh
Q 041414           23 AVADRAFECKT--CNRQFPSFQALGGHRA-SHKKSRVTEGSGGGVDTQQSPVKPKTHECSV--CGLEFAIGQALGGHMRR   97 (152)
Q Consensus        23 h~~e~~~~C~~--C~k~f~~~~~L~~h~~-~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~   97 (152)
                      .+++++|.|..  |++.|.....|..|++ +|.+                   +++|.|.+  |++.|.....|.+|+++
T Consensus         2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-------------------~~~~~C~~~~C~k~f~~~~~L~~H~~~   62 (79)
T 2dlk_A            2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-------------------QKSFSCPEPACGKSFNFKKHLKEHMKL   62 (79)
T ss_dssp             CSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGS-------------------CCCEECSCTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCccCCCCCCcCccCCHHHHHHHHHHHhCC-------------------CCCeECCCCCCcCccCCHHHHHHHHHH
Confidence            36789999987  9999999999999998 6766                   67899999  99999999999999999


Q ss_pred             ccCCCccc-cccccccc
Q 041414           98 HRAGASHA-NEKLSAFS  113 (152)
Q Consensus        98 h~~~~~~~-~~~~~~~~  113 (152)
                      |++++++. ..|+++|.
T Consensus        63 H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           63 HSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             HHTSCCCSCCSSSCCCC
T ss_pred             hCCCCCeeCCCCCCCCC
Confidence            99999997 89998874

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=5.4e-17  Score=99.91  Aligned_cols=69  Identities=22%  Similarity=0.345  Sum_probs=60.6

Q ss_pred             ccCCCcceecCcccccCCChhHHHHHHH-hcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHH-Hhhcc
Q 041414           22 MAVADRAFECKTCNRQFPSFQALGGHRA-SHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGH-MRRHR   99 (152)
Q Consensus        22 ~h~~e~~~~C~~C~k~f~~~~~L~~h~~-~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H-~~~h~   99 (152)
                      .-+|++||.|++|++.|...+.|..|++ +|++.                .+++||.|.+||++|.....|..| +++|+
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~----------------~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Ht   75 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV----------------VLNSSYVCVECNFLTKRYDALSEHNLKYHP   75 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSC----------------CCSCCEEETTTTEEESSTHHHHTHHHHTST
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC----------------CCCCCcCCCCCCcccCCHHHHHHHHHHhcC
Confidence            3478999999999999999999999997 48541                136899999999999999999999 89999


Q ss_pred             CCCcccc
Q 041414          100 AGASHAN  106 (152)
Q Consensus       100 ~~~~~~~  106 (152)
                      |++||..
T Consensus        76 gekpy~C   82 (102)
T 2ghf_A           76 GEENFKL   82 (102)
T ss_dssp             TCCCEEE
T ss_pred             CCCCeeC
Confidence            9999873

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.66  E-value=7.5e-17  Score=88.76  Aligned_cols=57  Identities=28%  Similarity=0.448  Sum_probs=49.5

Q ss_pred             CCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhccC
Q 041414           25 ADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        25 ~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~  100 (152)
                      |++||.|++|++.|.....|..|+++|.+                   ++||.|++|++.|.....|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTG-------------------EKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHC-------------------CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCC-------------------CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            57899999999999999999999999876                   6789999999999999999999998864

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=1.9e-16  Score=92.72  Aligned_cols=68  Identities=18%  Similarity=0.352  Sum_probs=58.9

Q ss_pred             ccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHH-hhccC
Q 041414           22 MAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHM-RRHRA  100 (152)
Q Consensus        22 ~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~h~~  100 (152)
                      +|++++||.|++|++.|.....|..|+++|.+..                ++++|.|.+|++.|.....|.+|+ ..|.+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~----------------~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~   64 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETV----------------AALRFPCEFCGKRFEKPDSVAAHRSKSHPA   64 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHT----------------TTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccC----------------CCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence            4889999999999999999999999999987521                267999999999999999999999 46777


Q ss_pred             CCccc
Q 041414          101 GASHA  105 (152)
Q Consensus       101 ~~~~~  105 (152)
                      +.+..
T Consensus        65 ~~~~~   69 (78)
T 2d9h_A           65 LLLAP   69 (78)
T ss_dssp             TSSCC
T ss_pred             CCCCc
Confidence            76544

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.65  E-value=4.8e-17  Score=97.56  Aligned_cols=81  Identities=22%  Similarity=0.447  Sum_probs=71.6

Q ss_pred             CCcceecC--cccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhccCCC
Q 041414           25 ADRAFECK--TCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        25 ~e~~~~C~--~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      |++||.|+  .|++.|.....|..|+++|.+                   +++|.|..|++.|.....|..|+++|.+++
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   61 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTG-------------------QKPFQCRICMRNFSRSDHLTTHIRTHTGEK   61 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHC-------------------CCCEECTTTCCEESCHHHHHHHHHHHHCCC
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCC-------------------CCCccCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            57899998  599999999999999999876                   678999999999999999999999999999


Q ss_pred             ccc-ccccccccCCCCCcchhhh
Q 041414          103 SHA-NEKLSAFSSLSDTAPLVEK  124 (152)
Q Consensus       103 ~~~-~~~~~~~~~~~~~~~~~~~  124 (152)
                      ++. ..|++.|.....+..+.+.
T Consensus        62 ~~~C~~C~~~f~~~~~l~~H~~~   84 (90)
T 1a1h_A           62 PFACDICGRKFARSDERKRHTKI   84 (90)
T ss_dssp             CEECTTTCCEESSHHHHHHHHGG
T ss_pred             CccCCCCCchhCCHHHHHHHHHH
Confidence            987 8999999988777766554

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.63  E-value=3.5e-16  Score=86.02  Aligned_cols=56  Identities=20%  Similarity=0.457  Sum_probs=52.4

Q ss_pred             ceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhccCCC
Q 041414           28 AFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      ||.|++|++.|.....|..|+++|.+                   +++|.|+.|++.|.....|.+|+++|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTD-------------------VRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSS-------------------CCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCC-------------------CCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68999999999999999999998876                   678999999999999999999999998874

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.63  E-value=8.5e-17  Score=94.76  Aligned_cols=77  Identities=25%  Similarity=0.424  Sum_probs=69.3

Q ss_pred             ceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhccCCCccc-c
Q 041414           28 AFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA-N  106 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~  106 (152)
                      ||.|++|++.|.....|..|+++|.+                   +++|.|..|++.|.....|..|+++|.+++++. .
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   61 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSD-------------------TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ   61 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHT-------------------CCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECT
T ss_pred             CccCCCCcccccCchhHHHHHHHcCC-------------------CCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCC
Confidence            68999999999999999999998876                   678999999999999999999999999999887 8


Q ss_pred             cccccccCCCCCcchhh
Q 041414          107 EKLSAFSSLSDTAPLVE  123 (152)
Q Consensus       107 ~~~~~~~~~~~~~~~~~  123 (152)
                      .|++.|.....+..+.+
T Consensus        62 ~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A           62 VCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             TTSCEESSHHHHHHHHH
T ss_pred             CcchhhCChHHHHHHHH
Confidence            99999988766655544

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.61  E-value=1.7e-17  Score=99.41  Aligned_cols=28  Identities=29%  Similarity=0.629  Sum_probs=16.6

Q ss_pred             CcceecCcccccCCChhHHHHHHHhcCC
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRASHKK   53 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~h~~   53 (152)
                      |+||.|++|++.|.....|..|+++|.+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~   28 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCC
Confidence            3556666666666666666666655554

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.60  E-value=9e-17  Score=95.21  Aligned_cols=74  Identities=16%  Similarity=0.264  Sum_probs=56.3

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCc--ccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceecc
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKT--CNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECS   79 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~--C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~   79 (152)
                      ..|++.|.....|.  .|+++|++++||.|++  |++.|.....|..|+++|++                      |.|.
T Consensus         7 ~~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----------------------~~C~   62 (85)
T 2j7j_A            7 ENCGKAFKKHNQLK--VHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----------------------YPCK   62 (85)
T ss_dssp             TTCCCEESSHHHHH--HHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS----------------------EECC
T ss_pred             CCCCcccCCHHHHH--HHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC----------------------CCCC
Confidence            35777777777766  7777777777777777  77777777777777776642                      7777


Q ss_pred             c---cccccccchHHHHHHhhcc
Q 041414           80 V---CGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        80 ~---C~k~F~~~~~L~~H~~~h~   99 (152)
                      .   |++.|.....|..|+++|+
T Consensus        63 ~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           63 KDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             SCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCCCCccCCHHHHHHHHHhcC
Confidence            7   8888888888888888764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.1e-15  Score=88.18  Aligned_cols=60  Identities=27%  Similarity=0.576  Sum_probs=55.3

Q ss_pred             cccCCCcceecC--cccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhc
Q 041414           21 NMAVADRAFECK--TCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRH   98 (152)
Q Consensus        21 ~~h~~e~~~~C~--~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h   98 (152)
                      .+|+++++|.|+  .|++.|.....|..|+++|.+                   +++|.|.+||+.|.....|.+|+++|
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~-------------------~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTG-------------------QKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHC-------------------CCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCC-------------------CCCeECCCCCchhCCHHHHHHHHHhc
Confidence            468899999997  599999999999999999876                   67899999999999999999999988


Q ss_pred             c
Q 041414           99 R   99 (152)
Q Consensus        99 ~   99 (152)
                      +
T Consensus        73 t   73 (73)
T 1f2i_G           73 T   73 (73)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.1e-16  Score=93.82  Aligned_cols=64  Identities=16%  Similarity=0.365  Sum_probs=58.4

Q ss_pred             cchhcccCCCCCCCcccccc-ccCCCcceecCc--ccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceec
Q 041414            2 ANCLMFMPHGGDFDAVNGVN-MAVADRAFECKT--CNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHEC   78 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~-~h~~e~~~~C~~--C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C   78 (152)
                      ..|++.|.....|.  .|++ +|+++++|.|++  |++.|.....|..|+++|++                   +++|.|
T Consensus        13 ~~C~~~f~~~~~L~--~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-------------------~~~~~C   71 (79)
T 2dlk_A           13 PGCGRIFSNRQYLN--HHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD-------------------TRDYIC   71 (79)
T ss_dssp             TTTCCEESSHHHHH--HHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHT-------------------SCCCSC
T ss_pred             CCCcCccCCHHHHH--HHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCC-------------------CCCeeC
Confidence            35999999998888  9999 799999999999  99999999999999999987                   678899


Q ss_pred             cccccccc
Q 041414           79 SVCGLEFA   86 (152)
Q Consensus        79 ~~C~k~F~   86 (152)
                      .+||++|.
T Consensus        72 ~~C~k~F~   79 (79)
T 2dlk_A           72 EFSGPSSG   79 (79)
T ss_dssp             CSSSCCCC
T ss_pred             CCCCCCCC
Confidence            99999884

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.59  E-value=1.1e-17  Score=100.21  Aligned_cols=76  Identities=13%  Similarity=0.249  Sum_probs=69.8

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceecccc
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVC   81 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C   81 (152)
                      ..|++.|.....|.  .|+++|++++||.|++|++.|.....|..|+++|++                    .+|.|..|
T Consensus         7 ~~C~k~f~~~~~L~--~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~--------------------~~~~c~~C   64 (88)
T 1llm_C            7 RICMRNFSRSDHLT--THIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI--------------------LPILEDKV   64 (88)
T ss_dssp             TTTCCEESCHHHHH--HHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH--------------------HHHHHHHH
T ss_pred             CCCCCccCCHHHHH--HHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC--------------------CcchHHHH
Confidence            36999999998888  999999999999999999999999999999998863                    58999999


Q ss_pred             ccccccchHHHHHHhhcc
Q 041414           82 GLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        82 ~k~F~~~~~L~~H~~~h~   99 (152)
                      ++.|.....|..|++.+.
T Consensus        65 ~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           65 EELLSKNYHLENEVARLK   82 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhHHHHHHHH
Confidence            999999999999998654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.6e-15  Score=84.20  Aligned_cols=56  Identities=30%  Similarity=0.586  Sum_probs=51.5

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHH-hhccCC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHM-RRHRAG  101 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~h~~~  101 (152)
                      +||.|++|++.|.....|..|+++|.+                   +++|.|+.|++.|.....|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN-------------------EKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS-------------------SCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCC-------------------CCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            589999999999999999999998876                   67899999999999999999997 678876

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.58  E-value=6.1e-17  Score=90.24  Aligned_cols=52  Identities=13%  Similarity=0.248  Sum_probs=48.4

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSR   55 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~   55 (152)
                      ..|++.|.....|.  .|+++|++++||.|++||++|...++|..|+++|+++.
T Consensus         8 ~~C~k~F~~~~~L~--~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            8 NFCGKTYRDASGLS--RHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             TTTCCEESSHHHHH--HHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCCEeCCHHHHH--HHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            36999999999998  99999999999999999999999999999999999853

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.58  E-value=1.6e-16  Score=101.64  Aligned_cols=63  Identities=24%  Similarity=0.317  Sum_probs=55.9

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhh
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      .|+ .|++++||.|++|++.|.....|..|+++|                     ++||.|.+||+.|.....|.+|+++
T Consensus        65 ~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H---------------------~~~~~C~~C~k~f~~~~~l~~H~~~  122 (129)
T 2wbt_A           65 RLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT---------------------EHTKVCPVCKKEFTSTDSALDHVCK  122 (129)
T ss_dssp             HHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT---------------------CCCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             HHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC---------------------CCCCCCCCCCcccCCHHHHHHHHHH
Confidence            555 688899999999999999999999999887                     2579999999999999999999999


Q ss_pred             ccCCC
Q 041414           98 HRAGA  102 (152)
Q Consensus        98 h~~~~  102 (152)
                      |++..
T Consensus       123 h~~~~  127 (129)
T 2wbt_A          123 KHNIC  127 (129)
T ss_dssp             TTCCC
T ss_pred             HCCcc
Confidence            98863

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.57  E-value=2.4e-16  Score=97.38  Aligned_cols=74  Identities=15%  Similarity=0.249  Sum_probs=69.1

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCCC
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVKP   73 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~~   73 (152)
                      .|++.|.....|.  .|+++|.++++|.|++|++.|.....|..|+++|.++++|.|..|+.         .|+++|.++
T Consensus        22 ~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   99 (106)
T 2ee8_A           22 FCGRHFTKSYNLL--IHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQT   99 (106)
T ss_dssp             SSCCBCSSHHHHH--HHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSC
T ss_pred             CCCCccCCHHHHH--HHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCC
Confidence            6899999988888  99999999999999999999999999999999999999999999876         788999999


Q ss_pred             Cceec
Q 041414           74 KTHEC   78 (152)
Q Consensus        74 k~~~C   78 (152)
                      ++|.+
T Consensus       100 ~~~~~  104 (106)
T 2ee8_A          100 SSPTA  104 (106)
T ss_dssp             CCCCC
T ss_pred             CCCcC
Confidence            99875

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=7.7e-17  Score=92.91  Aligned_cols=67  Identities=19%  Similarity=0.317  Sum_probs=59.0

Q ss_pred             CCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchH
Q 041414           11 GGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQA   90 (152)
Q Consensus        11 ~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~   90 (152)
                      ...|.  .|+++|++++||.|++|++.|.....|..                          +++|.|..||+.|.....
T Consensus         3 ~~~l~--~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------------------------~~~~~C~~C~~~f~~~~~   54 (73)
T 2ctu_A            3 SGSSG--KRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------------------------RKTPMCEKCRKDSCQEAA   54 (73)
T ss_dssp             CCSCC--CCCCCCCCCSEEECSSSCCEEECCCCCCC--------------------------SSSCCCHHHHHTCSCCCS
T ss_pred             chhHH--HHHHHhCCCCCeeCCcccchhCCHHHhCc--------------------------CCCCCCCCCChhhcCHHH
Confidence            44566  99999999999999999999988776553                          468999999999999999


Q ss_pred             HHHHHhhccCCCccc
Q 041414           91 LGGHMRRHRAGASHA  105 (152)
Q Consensus        91 L~~H~~~h~~~~~~~  105 (152)
                      |..|+++|.+++++.
T Consensus        55 l~~H~~~H~~~~~~~   69 (73)
T 2ctu_A           55 LNKDEGNESGKKTSG   69 (73)
T ss_dssp             SCCCSSCCCCCCCSS
T ss_pred             HHHHHHhhcCCCCCC
Confidence            999999999998875

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.53  E-value=2.9e-15  Score=89.49  Aligned_cols=78  Identities=24%  Similarity=0.425  Sum_probs=68.8

Q ss_pred             CcceecCc--ccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceecc--ccccccccchHHHHHHhhccCC
Q 041414           26 DRAFECKT--CNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECS--VCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        26 e~~~~C~~--C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      .++|.|++  |++.|.....|..|+++|.+                   +++|.|+  .|++.|.....|..|+++|.++
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   63 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTG-------------------EKPYHCDWDGCGWKFARSDELTRHYRKHTGH   63 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCS-------------------SCCEECCSTTTCCEESSHHHHHHHHHHHHCC
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCC-------------------CCCcCCCCCCCCCccCCHHHHHHHHHHcCCC
Confidence            56899999  99999999999999988866                   6789997  5999999999999999999999


Q ss_pred             Cccc-ccccccccCCCCCcchh
Q 041414          102 ASHA-NEKLSAFSSLSDTAPLV  122 (152)
Q Consensus       102 ~~~~-~~~~~~~~~~~~~~~~~  122 (152)
                      +++. ..|++.|.....+..+.
T Consensus        64 ~~~~C~~C~~~f~~~~~l~~H~   85 (89)
T 2wbs_A           64 RPFQCQKCDRAFSRSDHLALHM   85 (89)
T ss_dssp             CCEECSSSSCEESSHHHHHHHG
T ss_pred             CCccCCCCCcccCCHHHHHHHH
Confidence            9987 89999998876655544

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=8.6e-15  Score=82.95  Aligned_cols=60  Identities=22%  Similarity=0.480  Sum_probs=54.1

Q ss_pred             cCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceecc-ccccccccchHHHHHHhhccCC
Q 041414           23 AVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECS-VCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        23 h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~-~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      ..+++||.|++|++.|. .+.|..|+++ .+                   ++||.|. .||++|...+.|..|+++|...
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~-------------------~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CP-------------------RLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CS-------------------SSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cC-------------------CcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            45789999999999999 9999999987 55                   7899999 9999999999999999999876


Q ss_pred             Cc
Q 041414          102 AS  103 (152)
Q Consensus       102 ~~  103 (152)
                      .+
T Consensus        64 ~~   65 (66)
T 2eod_A           64 AL   65 (66)
T ss_dssp             CC
T ss_pred             Cc
Confidence            54

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.52  E-value=9e-15  Score=89.15  Aligned_cols=69  Identities=19%  Similarity=0.222  Sum_probs=49.3

Q ss_pred             CCCCCCCC--CCc---------ccccccCCCCceecc--ccccccccchHHHHHHhhccCCCccc-ccccccccCCCCCc
Q 041414           54 SRVTEGSG--GGV---------DTQQSPVKPKTHECS--VCGLEFAIGQALGGHMRRHRAGASHA-NEKLSAFSSLSDTA  119 (152)
Q Consensus        54 ~~~~~c~~--~~~---------~h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~~~~~~~~  119 (152)
                      .++|.|..  |+.         .|++.|.++++|.|.  .|++.|.....|..|+++|.+++++. ..|++.|.....+.
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            45566664  654         677777788888885  58888888888888888888887776 77888777665554


Q ss_pred             chh
Q 041414          120 PLV  122 (152)
Q Consensus       120 ~~~  122 (152)
                      .++
T Consensus        93 ~H~   95 (100)
T 2ebt_A           93 LHM   95 (100)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.51  E-value=3.4e-15  Score=90.45  Aligned_cols=73  Identities=14%  Similarity=0.165  Sum_probs=67.0

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------ccccccCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQSPVK   72 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~~h~~   72 (152)
                      ..|++.|.....|.  .|+++|.++++|.|++|++.|.....|..|+++|.++++|.|..|+.         .|+++|.+
T Consensus        12 ~~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   89 (96)
T 2dmd_A           12 EVCGKCFSRKDKLK--THMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTG   89 (96)
T ss_dssp             TTTTBCCCCHHHHH--HHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCCCCccCCHHHHH--HHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            36999999988888  99999999999999999999999999999999999999999999986         78889988


Q ss_pred             CCce
Q 041414           73 PKTH   76 (152)
Q Consensus        73 ~k~~   76 (152)
                      +++.
T Consensus        90 ~~~p   93 (96)
T 2dmd_A           90 DSGP   93 (96)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8653

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=2.8e-14  Score=74.91  Aligned_cols=44  Identities=18%  Similarity=0.379  Sum_probs=39.3

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      +|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            78999999999999999999999999999999999866555543

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=2e-14  Score=75.58  Aligned_cols=44  Identities=18%  Similarity=0.398  Sum_probs=39.2

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            79999999999999999999999999999999998866555543

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=2.3e-14  Score=75.33  Aligned_cols=45  Identities=18%  Similarity=0.336  Sum_probs=39.3

Q ss_pred             cccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           17 VNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        17 ~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      ++|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A            1 GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CCCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            379999999999999999999999999999999998865555443

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.49  E-value=3.4e-14  Score=74.64  Aligned_cols=44  Identities=20%  Similarity=0.446  Sum_probs=39.2

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      +|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999999866555543

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2.9e-14  Score=74.81  Aligned_cols=44  Identities=16%  Similarity=0.333  Sum_probs=38.8

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            79999999999999999999999999999999998865554443

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=3.6e-14  Score=74.47  Aligned_cols=44  Identities=18%  Similarity=0.405  Sum_probs=38.9

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            68999999999999999999999999999999998865555443

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=3.3e-14  Score=74.62  Aligned_cols=44  Identities=18%  Similarity=0.354  Sum_probs=39.2

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            78999999999999999999999999999999999866555543

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=3.2e-14  Score=74.70  Aligned_cols=44  Identities=20%  Similarity=0.460  Sum_probs=38.8

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      +|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            68999999999999999999999999999999998865554443

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=3.5e-14  Score=74.56  Aligned_cols=44  Identities=18%  Similarity=0.419  Sum_probs=38.9

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            78999999999999999999999999999999998865555443

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=3.4e-14  Score=74.58  Aligned_cols=44  Identities=18%  Similarity=0.440  Sum_probs=38.7

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            68999999999999999999999999999999998865555443

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=4.7e-14  Score=74.03  Aligned_cols=44  Identities=18%  Similarity=0.420  Sum_probs=39.1

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999998866555543

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=3.8e-14  Score=73.71  Aligned_cols=43  Identities=23%  Similarity=0.470  Sum_probs=38.1

Q ss_pred             cccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           19 GVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        19 h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      |+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            7889999999999999999999999999999999866555543

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.48  E-value=4.4e-14  Score=74.19  Aligned_cols=44  Identities=20%  Similarity=0.420  Sum_probs=39.0

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999999866555543

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.48  E-value=9.7e-15  Score=86.31  Aligned_cols=74  Identities=20%  Similarity=0.339  Sum_probs=63.3

Q ss_pred             ceec--CcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccc--cccccccchHHHHHHhhccCCCc
Q 041414           28 AFEC--KTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSV--CGLEFAIGQALGGHMRRHRAGAS  103 (152)
Q Consensus        28 ~~~C--~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~~~  103 (152)
                      ||.|  +.|++.|.....|..|+++|.+                   +++|.|+.  |++.|.....|.+|+++|++  .
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~   59 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQ-------------------QLPYECPHEGCDKRFSLPSRLKRHEKVHAG--Y   59 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHT-------------------TCCEECCSTTCCCEESSHHHHHHHHHHHHS--E
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCC-------------------CCCeeCCCCCCcCccCCHHHHHHHHHHhCC--C
Confidence            6899  9999999999999999999876                   67899988  99999999999999999998  3


Q ss_pred             cccc---ccccccCCCCCcchh
Q 041414          104 HANE---KLSAFSSLSDTAPLV  122 (152)
Q Consensus       104 ~~~~---~~~~~~~~~~~~~~~  122 (152)
                      .+..   |++.|.....+..++
T Consensus        60 ~C~~~~~C~~~f~~~~~l~~H~   81 (85)
T 2j7j_A           60 PCKKDDSCSFVGKTWTLYLKHV   81 (85)
T ss_dssp             ECCSCSSCCCEESSHHHHHHHH
T ss_pred             CCCCCCCCCCccCCHHHHHHHH
Confidence            3466   999888765554443

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.48  E-value=3.4e-14  Score=74.59  Aligned_cols=43  Identities=16%  Similarity=0.401  Sum_probs=38.2

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      +|+++|++++||.|++|++.|...+.|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            6899999999999999999999999999999999886555444

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=4.8e-14  Score=73.96  Aligned_cols=44  Identities=18%  Similarity=0.397  Sum_probs=38.8

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      +|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68999999999999999999999999999999998865554443

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=3.7e-14  Score=74.48  Aligned_cols=44  Identities=16%  Similarity=0.402  Sum_probs=38.7

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            68999999999999999999999999999999998865555443

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=3.5e-14  Score=74.53  Aligned_cols=44  Identities=16%  Similarity=0.429  Sum_probs=39.0

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      +|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999999866555543

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.4e-14  Score=74.63  Aligned_cols=44  Identities=20%  Similarity=0.421  Sum_probs=38.8

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68999999999999999999999999999999998865555443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=4.5e-14  Score=74.14  Aligned_cols=44  Identities=16%  Similarity=0.391  Sum_probs=39.1

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence            68999999999999999999999999999999998866555543

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=4.4e-14  Score=74.14  Aligned_cols=44  Identities=18%  Similarity=0.341  Sum_probs=38.8

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999998865555443

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=4.1e-14  Score=74.25  Aligned_cols=44  Identities=16%  Similarity=0.425  Sum_probs=38.8

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999998865555443

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.47  E-value=3.8e-14  Score=74.43  Aligned_cols=44  Identities=16%  Similarity=0.422  Sum_probs=38.8

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      +|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68999999999999999999999999999999998865555443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=4.1e-14  Score=74.28  Aligned_cols=44  Identities=18%  Similarity=0.414  Sum_probs=39.0

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999998865555443

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.5e-14  Score=74.57  Aligned_cols=44  Identities=18%  Similarity=0.383  Sum_probs=39.0

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      +|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68999999999999999999999999999999998866555543

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.47  E-value=3.7e-14  Score=74.41  Aligned_cols=44  Identities=18%  Similarity=0.322  Sum_probs=38.7

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      +|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68999999999999999999999999999999998865555443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=5.1e-14  Score=73.89  Aligned_cols=44  Identities=16%  Similarity=0.304  Sum_probs=39.0

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68999999999999999999999999999999998866555543

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.5e-14  Score=74.53  Aligned_cols=44  Identities=18%  Similarity=0.463  Sum_probs=38.9

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            78999999999999999999999999999999998865555443

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=5.2e-14  Score=73.87  Aligned_cols=44  Identities=20%  Similarity=0.454  Sum_probs=39.0

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999999866555543

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=4.5e-14  Score=74.14  Aligned_cols=44  Identities=16%  Similarity=0.407  Sum_probs=38.6

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999998865555443

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=5.2e-14  Score=73.89  Aligned_cols=44  Identities=20%  Similarity=0.483  Sum_probs=38.7

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68999999999999999999999999999999998865555443

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=4.6e-14  Score=74.05  Aligned_cols=44  Identities=18%  Similarity=0.373  Sum_probs=38.7

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      +|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68999999999999999999999999999999998865555443

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=6.3e-14  Score=73.58  Aligned_cols=44  Identities=18%  Similarity=0.356  Sum_probs=38.7

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999998865555443

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.7e-14  Score=74.01  Aligned_cols=43  Identities=16%  Similarity=0.453  Sum_probs=38.0

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            6899999999999999999999999999999999885555444

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.8e-14  Score=74.03  Aligned_cols=44  Identities=16%  Similarity=0.449  Sum_probs=39.1

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999999866555543

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=5.5e-14  Score=73.82  Aligned_cols=44  Identities=14%  Similarity=0.372  Sum_probs=38.5

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68899999999999999999999999999999998865554443

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=6.8e-14  Score=73.42  Aligned_cols=44  Identities=18%  Similarity=0.393  Sum_probs=38.7

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999998865555443

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=5e-14  Score=73.95  Aligned_cols=43  Identities=16%  Similarity=0.387  Sum_probs=38.7

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      +|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            6899999999999999999999999999999999886655554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=5.8e-14  Score=73.69  Aligned_cols=44  Identities=16%  Similarity=0.386  Sum_probs=38.7

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999998865555543

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.46  E-value=5.6e-14  Score=73.72  Aligned_cols=44  Identities=18%  Similarity=0.403  Sum_probs=38.6

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            68999999999999999999999999999999998865554443

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.8e-14  Score=74.40  Aligned_cols=44  Identities=18%  Similarity=0.456  Sum_probs=38.9

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68999999999999999999999999999999998865555543

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=8.2e-14  Score=73.09  Aligned_cols=43  Identities=21%  Similarity=0.505  Sum_probs=39.6

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            7899999999999999999999999999999999987766664

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=8.1e-14  Score=73.12  Aligned_cols=43  Identities=16%  Similarity=0.364  Sum_probs=38.3

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPS   44 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6889999999999999999999999999999999886555444

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.45  E-value=8.5e-14  Score=73.08  Aligned_cols=44  Identities=16%  Similarity=0.344  Sum_probs=38.7

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|.....|..|+++|+++++|.|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999998865555443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4.4e-14  Score=74.16  Aligned_cols=44  Identities=16%  Similarity=0.395  Sum_probs=38.6

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999998865554443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=7.1e-14  Score=73.41  Aligned_cols=44  Identities=16%  Similarity=0.380  Sum_probs=38.9

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999866555543

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=9.4e-14  Score=73.13  Aligned_cols=44  Identities=18%  Similarity=0.344  Sum_probs=38.8

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHH-hcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRA-SHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~-~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|++ +|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            68999999999999999999999999999999 898866555543

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=8e-14  Score=73.17  Aligned_cols=44  Identities=20%  Similarity=0.440  Sum_probs=40.1

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      +|+++|++++||.|++|++.|...+.|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999999977776653

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=6.6e-14  Score=73.46  Aligned_cols=44  Identities=18%  Similarity=0.407  Sum_probs=38.5

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|..
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            68899999999999999999999999999999998865554443

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.44  E-value=1.9e-13  Score=78.50  Aligned_cols=59  Identities=27%  Similarity=0.460  Sum_probs=53.4

Q ss_pred             cccCCCcceecCc--ccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccc--cccccccchHHHHHHh
Q 041414           21 NMAVADRAFECKT--CNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSV--CGLEFAIGQALGGHMR   96 (152)
Q Consensus        21 ~~h~~e~~~~C~~--C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~   96 (152)
                      ..++..++|.|.+  |++.|.....|..|+++|.+                   +++|.|.+  |++.|.....|.+|++
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-------------------~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG-------------------EKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSS-------------------SCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCC-------------------CCCccCCCCCCCcccCCHHHHHhHhh
Confidence            4567889999998  99999999999999999876                   67899965  9999999999999998


Q ss_pred             hc
Q 041414           97 RH   98 (152)
Q Consensus        97 ~h   98 (152)
                      +|
T Consensus        71 ~H   72 (72)
T 2epa_A           71 TH   72 (72)
T ss_dssp             TC
T ss_pred             cC
Confidence            76

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.44  E-value=2.6e-13  Score=81.90  Aligned_cols=69  Identities=23%  Similarity=0.279  Sum_probs=57.2

Q ss_pred             CcceecCcccccCCChhHHHHHHHh-cCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhccCCCcc
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRAS-HKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASH  104 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~-h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~  104 (152)
                      ...|.|..|++.|.....|..|+++ |.+.++..+..           .++|.|.+|++.|.....|.+|+++|+++++|
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~-----------c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   91 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV-----------CYWEECPREGKSFKAKYKLVNHIRVHTGEKSG   91 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCC-----------CCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCC
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccc-----------eeccCCCCCCcccCCHHHHHHHHHhcCCCCCC
Confidence            3457899999999999999999998 87755432111           12489999999999999999999999999887


Q ss_pred             c
Q 041414          105 A  105 (152)
Q Consensus       105 ~  105 (152)
                      .
T Consensus        92 ~   92 (95)
T 2ej4_A           92 P   92 (95)
T ss_dssp             S
T ss_pred             C
Confidence            5

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=1.4e-13  Score=72.21  Aligned_cols=43  Identities=23%  Similarity=0.492  Sum_probs=39.5

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999999999999999999987776664

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.44  E-value=1.1e-13  Score=72.62  Aligned_cols=43  Identities=21%  Similarity=0.461  Sum_probs=39.6

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999999999999999999987776665

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=8.7e-14  Score=73.04  Aligned_cols=44  Identities=14%  Similarity=0.366  Sum_probs=38.8

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|.....|..|+++|+++++|.|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            68899999999999999999999999999999998865555443

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=1.1e-13  Score=72.65  Aligned_cols=44  Identities=18%  Similarity=0.462  Sum_probs=40.0

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            78999999999999999999999999999999999877776653

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=1.3e-13  Score=72.41  Aligned_cols=43  Identities=21%  Similarity=0.424  Sum_probs=38.9

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6889999999999999999999999999999999986666554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.43  E-value=2.1e-14  Score=80.40  Aligned_cols=53  Identities=17%  Similarity=0.359  Sum_probs=45.7

Q ss_pred             cccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHH
Q 041414           17 VNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQAL   91 (152)
Q Consensus        17 ~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L   91 (152)
                      ..|+++|++++||.|++|++.|.....|.   ++|.+                   ++||.|.+||+.|....++
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~-------------------~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPM-------------------TGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETT-------------------TTEEBCSSSCCBCEECTTC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCC-------------------CCCEECCCCCCccccCccc
Confidence            38999999999999999999999887775   56655                   7899999999999887654

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.4e-13  Score=70.68  Aligned_cols=41  Identities=17%  Similarity=0.410  Sum_probs=37.7

Q ss_pred             cccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           19 GVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        19 h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      |+++|++++||.|++|++.|...+.|..|+++|+++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            67899999999999999999999999999999998776655

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.2e-13  Score=72.55  Aligned_cols=43  Identities=21%  Similarity=0.410  Sum_probs=39.3

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999999999999999999987766664

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.2e-13  Score=72.40  Aligned_cols=43  Identities=19%  Similarity=0.434  Sum_probs=39.2

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            6899999999999999999999999999999999987666654

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.43  E-value=1.3e-13  Score=70.86  Aligned_cols=41  Identities=20%  Similarity=0.448  Sum_probs=37.6

Q ss_pred             cccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           19 GVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        19 h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      |+++|++++||.|++|++.|...+.|..|+++|+++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            67899999999999999999999999999999998776655

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.8e-14  Score=83.99  Aligned_cols=56  Identities=21%  Similarity=0.472  Sum_probs=51.0

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      ..|++.|.....|.  .|+++|++++||.|++|++.|.....|..|+++|++++||.|
T Consensus        22 ~~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           22 DECGKSFSHSSDLS--KHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SSSCCBCSCHHHHH--HHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCcccCCHHHHH--HHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            36999999998888  999999999999999999999999999999999998776654

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.5e-13  Score=72.02  Aligned_cols=43  Identities=19%  Similarity=0.475  Sum_probs=39.5

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            6899999999999999999999999999999999987776664

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=1.5e-13  Score=72.14  Aligned_cols=43  Identities=26%  Similarity=0.465  Sum_probs=39.4

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            6899999999999999999999999999999999987766654

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.7e-13  Score=71.78  Aligned_cols=43  Identities=19%  Similarity=0.388  Sum_probs=39.4

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999999999999999999987766654

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.7e-13  Score=71.89  Aligned_cols=43  Identities=21%  Similarity=0.449  Sum_probs=39.5

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            6899999999999999999999999999999999987776664

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.4e-13  Score=72.20  Aligned_cols=43  Identities=16%  Similarity=0.443  Sum_probs=39.3

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            6899999999999999999999999999999999987766664

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.6e-13  Score=71.98  Aligned_cols=43  Identities=16%  Similarity=0.459  Sum_probs=39.5

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999999999999999999987776664

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.8e-13  Score=71.10  Aligned_cols=42  Identities=19%  Similarity=0.429  Sum_probs=38.8

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      +|+++|++++||.|++|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            789999999999999999999999999999999998776655

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.42  E-value=1.1e-13  Score=75.16  Aligned_cols=51  Identities=10%  Similarity=0.100  Sum_probs=47.0

Q ss_pred             hcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCC
Q 041414            5 LMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVT   57 (152)
Q Consensus         5 ~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~   57 (152)
                      ++.|.....|.  .|+++|++++||.|++|++.|...+.|..|+++|++++||
T Consensus         3 ~k~~~~~~~l~--~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTE--KPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCC--CCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchh--hHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            46788888888  9999999999999999999999999999999999998775

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.6e-13  Score=72.00  Aligned_cols=43  Identities=19%  Similarity=0.464  Sum_probs=39.4

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            6899999999999999999999999999999999987776664

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.8e-13  Score=71.82  Aligned_cols=43  Identities=16%  Similarity=0.466  Sum_probs=39.2

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            6899999999999999999999999999999999987766654

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.5e-13  Score=72.08  Aligned_cols=43  Identities=16%  Similarity=0.403  Sum_probs=39.8

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      +|+++|++++||.|++|++.|...+.|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999999999999999999997777665

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.5e-13  Score=72.02  Aligned_cols=43  Identities=19%  Similarity=0.415  Sum_probs=39.4

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            6899999999999999999999999999999999987776664

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.5e-13  Score=71.34  Aligned_cols=42  Identities=17%  Similarity=0.331  Sum_probs=39.0

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            789999999999999999999999999999999998777665

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2e-13  Score=71.51  Aligned_cols=43  Identities=21%  Similarity=0.444  Sum_probs=39.3

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6889999999999999999999999999999999987766664

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.3e-13  Score=71.40  Aligned_cols=43  Identities=19%  Similarity=0.419  Sum_probs=39.5

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            6889999999999999999999999999999999987776664

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2e-13  Score=71.55  Aligned_cols=43  Identities=21%  Similarity=0.340  Sum_probs=39.2

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999999999999999999987766654

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2e-13  Score=70.86  Aligned_cols=42  Identities=17%  Similarity=0.414  Sum_probs=38.8

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            689999999999999999999999999999999998776655

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.8e-13  Score=71.72  Aligned_cols=43  Identities=16%  Similarity=0.408  Sum_probs=39.4

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            6899999999999999999999999999999999987776664

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.7e-13  Score=71.12  Aligned_cols=42  Identities=17%  Similarity=0.283  Sum_probs=38.6

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            689999999999999999999999999999999988776655

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.5e-13  Score=71.40  Aligned_cols=42  Identities=17%  Similarity=0.389  Sum_probs=38.6

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            689999999999999999999999999999999998766655

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.8e-13  Score=71.72  Aligned_cols=43  Identities=16%  Similarity=0.401  Sum_probs=39.5

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            6899999999999999999999999999999999987776664

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.41  E-value=1.8e-13  Score=74.38  Aligned_cols=48  Identities=21%  Similarity=0.477  Sum_probs=43.2

Q ss_pred             cccCCCcceecCcccccCCChhHHHHHHH-hcCCCCCCCCCCCCcccccccCCCCceecccccccccc
Q 041414           21 NMAVADRAFECKTCNRQFPSFQALGGHRA-SHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAI   87 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~~~L~~h~~-~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~   87 (152)
                      ..|++++||.|++|++.|.....|..|++ +|.+                   ++||.|.+|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~-------------------~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS-------------------ERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCC-------------------CCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCC-------------------CCCccCCCCCCCCCC
Confidence            46789999999999999999999999987 7876                   678999999999975

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.6e-13  Score=72.01  Aligned_cols=43  Identities=23%  Similarity=0.503  Sum_probs=39.6

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999999999999999999987776664

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.40  E-value=4.8e-14  Score=85.14  Aligned_cols=70  Identities=14%  Similarity=0.207  Sum_probs=62.5

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCC--CCCCCCCCCc---------cccc-c
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKS--RVTEGSGGGV---------DTQQ-S   69 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~--~~~~c~~~~~---------~h~~-~   69 (152)
                      ..|++.|.....|.  .|+++|.++++|.|++|++.|.....|..|+++|.++  ++|.|..|+.         .|++ .
T Consensus        11 ~~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~   88 (95)
T 2yt9_A           11 EICGKIFRDVYHLN--RHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQV   88 (95)
T ss_dssp             SSSCCEESSSHHHH--HHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHT
T ss_pred             CCCCCccCChHHHH--HHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHh
Confidence            36999999998888  9999999999999999999999999999999999987  8999999876         6764 6


Q ss_pred             cCCC
Q 041414           70 PVKP   73 (152)
Q Consensus        70 h~~~   73 (152)
                      |.++
T Consensus        89 H~~~   92 (95)
T 2yt9_A           89 HSGP   92 (95)
T ss_dssp             SCCC
T ss_pred             cCCC
Confidence            7664

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.4e-13  Score=70.76  Aligned_cols=42  Identities=19%  Similarity=0.398  Sum_probs=38.0

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            488999999999999999999999999999999998776654

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.5e-13  Score=72.08  Aligned_cols=43  Identities=23%  Similarity=0.405  Sum_probs=39.8

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            7899999999999999999999999999999999987777664

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.3e-13  Score=71.42  Aligned_cols=43  Identities=19%  Similarity=0.431  Sum_probs=39.1

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            5889999999999999999999999999999999887766664

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.4e-13  Score=71.46  Aligned_cols=42  Identities=14%  Similarity=0.417  Sum_probs=38.9

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            789999999999999999999999999999999998776655

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.5e-13  Score=71.13  Aligned_cols=43  Identities=21%  Similarity=0.476  Sum_probs=39.3

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999999999999999999987766654

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.2e-13  Score=70.79  Aligned_cols=43  Identities=19%  Similarity=0.485  Sum_probs=39.1

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999987776664

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.39  E-value=3.3e-13  Score=69.28  Aligned_cols=41  Identities=20%  Similarity=0.404  Sum_probs=37.7

Q ss_pred             cccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           19 GVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        19 h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            77899999999999999999999999999999999777654

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=3e-13  Score=70.92  Aligned_cols=43  Identities=19%  Similarity=0.451  Sum_probs=39.4

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCC-CCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKK-SRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~-~~~~~c~   60 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++ +++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            689999999999999999999999999999999988 7777664

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.39  E-value=3.6e-14  Score=82.05  Aligned_cols=53  Identities=17%  Similarity=0.392  Sum_probs=49.7

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCC
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVT   57 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~   57 (152)
                      .|++.|.....|.  .|+++|+++++|.|.+|++.|.....|..|+++|++++||
T Consensus        22 ~C~k~f~~~~~l~--~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           22 RCQASFRYKGNLA--SHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             TSSCCBSCHHHHH--HHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCceeCCHHHHH--HHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            6999999998888  9999999999999999999999999999999999997764

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2e-13  Score=70.16  Aligned_cols=41  Identities=22%  Similarity=0.476  Sum_probs=37.8

Q ss_pred             cccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           19 GVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        19 h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            78899999999999999999999999999999999777654

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=2.6e-13  Score=69.75  Aligned_cols=41  Identities=22%  Similarity=0.496  Sum_probs=37.6

Q ss_pred             cccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           19 GVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        19 h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            78899999999999999999999999999999998777654

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.8e-13  Score=69.17  Aligned_cols=42  Identities=17%  Similarity=0.315  Sum_probs=38.7

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            689999999999999999999999999999999998777654

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=6.6e-13  Score=68.92  Aligned_cols=42  Identities=21%  Similarity=0.306  Sum_probs=38.6

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            578899999999999999999999999999999998776655

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=7.4e-13  Score=69.36  Aligned_cols=44  Identities=16%  Similarity=0.387  Sum_probs=37.7

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .++++|++++||.|++|++.|.....|..|+++|+++++|.|..
T Consensus         2 s~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            45689999999999999999999999999999998865555443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.35  E-value=1.6e-14  Score=89.29  Aligned_cols=74  Identities=12%  Similarity=0.001  Sum_probs=65.8

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCc---------cccc-ccC
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGV---------DTQQ-SPV   71 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~---------~h~~-~h~   71 (152)
                      ..|++.|.....|.  .|+++|  +++|.|.+|++.|.....|..|++ |.++++|.|..|+.         .|++ .|.
T Consensus        20 ~~C~~~f~~~~~l~--~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   94 (107)
T 1wjp_A           20 RLCNAKLSSLLEQG--SHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHN   94 (107)
T ss_dssp             TTTCCBCSSHHHHH--HHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred             CCCCCccCCHHHHH--HHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcC
Confidence            36899999888888  999998  579999999999999999999996 99999999998875         7886 999


Q ss_pred             CCCceeccc
Q 041414           72 KPKTHECSV   80 (152)
Q Consensus        72 ~~k~~~C~~   80 (152)
                      ++++|.|..
T Consensus        95 ~~~~~~~~~  103 (107)
T 1wjp_A           95 QNNMAPTSG  103 (107)
T ss_dssp             CCCCCCCCC
T ss_pred             CCCCCCCCC
Confidence            999998863

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=8.3e-13  Score=69.16  Aligned_cols=41  Identities=34%  Similarity=0.494  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCC
Confidence            47889999999999999999999999999999999998876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=9.1e-13  Score=69.03  Aligned_cols=41  Identities=24%  Similarity=0.404  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.34  E-value=8.7e-13  Score=69.11  Aligned_cols=41  Identities=27%  Similarity=0.383  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=9.6e-13  Score=68.90  Aligned_cols=41  Identities=22%  Similarity=0.348  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.34  E-value=9.9e-13  Score=68.82  Aligned_cols=41  Identities=24%  Similarity=0.327  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.1e-12  Score=68.71  Aligned_cols=41  Identities=24%  Similarity=0.359  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSG   42 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.34  E-value=1e-12  Score=68.81  Aligned_cols=41  Identities=22%  Similarity=0.348  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSG   42 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcC
Confidence            47889999999999999999999999999999999998876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.34  E-value=9.7e-13  Score=68.88  Aligned_cols=41  Identities=22%  Similarity=0.387  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSG   42 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCS
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=8.6e-13  Score=69.10  Aligned_cols=41  Identities=22%  Similarity=0.348  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|.++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSS
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=9.9e-13  Score=68.82  Aligned_cols=41  Identities=24%  Similarity=0.425  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTS
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=9.9e-13  Score=68.88  Aligned_cols=42  Identities=29%  Similarity=0.372  Sum_probs=39.0

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSS
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999988764

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.1e-12  Score=68.68  Aligned_cols=41  Identities=24%  Similarity=0.361  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSG   42 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.33  E-value=2.6e-13  Score=73.68  Aligned_cols=50  Identities=10%  Similarity=0.182  Sum_probs=41.1

Q ss_pred             ccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhccCCCcc
Q 041414           36 RQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASH  104 (152)
Q Consensus        36 k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~  104 (152)
                      +.|.....|..|+++|++                   +++|.|.+||+.|.....|..|+++|+++++|
T Consensus         4 k~~~~~~~l~~h~~~H~~-------------------~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQS-------------------EQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTS-------------------SCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCC-------------------CCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            455556666666666554                   78999999999999999999999999999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.1e-12  Score=68.66  Aligned_cols=41  Identities=27%  Similarity=0.420  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSG   42 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47888999999999999999999999999999999998876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=9.9e-13  Score=68.86  Aligned_cols=41  Identities=24%  Similarity=0.377  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCS
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.33  E-value=1.1e-12  Score=67.23  Aligned_cols=40  Identities=25%  Similarity=0.397  Sum_probs=37.4

Q ss_pred             cccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           66 TQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        66 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      |+++|+++++|.|.+||+.|.....|.+|+++|.++++|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPS   40 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCC
Confidence            6788999999999999999999999999999999998875

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.1e-12  Score=68.70  Aligned_cols=41  Identities=24%  Similarity=0.391  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|..||+.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSS
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1e-12  Score=68.77  Aligned_cols=41  Identities=24%  Similarity=0.370  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|..|+++|.++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1e-12  Score=68.73  Aligned_cols=41  Identities=24%  Similarity=0.392  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSG   42 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCS
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.3e-12  Score=68.38  Aligned_cols=41  Identities=24%  Similarity=0.360  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSG   42 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.1e-12  Score=68.71  Aligned_cols=42  Identities=24%  Similarity=0.339  Sum_probs=39.0

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|++++||.|.+|++.|.....|.+|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            478899999999999999999999999999999999988764

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=9.6e-13  Score=68.93  Aligned_cols=41  Identities=24%  Similarity=0.391  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|...+.|..|+++|++++++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSG   42 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCC
Confidence            47889999999999999999999999999999999998875

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.1e-12  Score=68.01  Aligned_cols=40  Identities=20%  Similarity=0.276  Sum_probs=37.6

Q ss_pred             cccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           66 TQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        66 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      |+++|++++||.|.+||+.|.....|.+|+++|++++++.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSG   40 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCS
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            6788999999999999999999999999999999998876

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.2e-12  Score=68.58  Aligned_cols=42  Identities=26%  Similarity=0.295  Sum_probs=38.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|++++||.|.+|++.|.....|.+|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999988764

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.33  E-value=1.2e-12  Score=68.50  Aligned_cols=41  Identities=24%  Similarity=0.390  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCS
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.1e-12  Score=68.68  Aligned_cols=41  Identities=22%  Similarity=0.323  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|..|+++|.++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSG   42 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47888999999999999999999999999999999998876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.3e-12  Score=68.39  Aligned_cols=41  Identities=22%  Similarity=0.311  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|..||+.|.....|..|+++|+++++|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSG   42 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1e-12  Score=68.78  Aligned_cols=41  Identities=22%  Similarity=0.336  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCS
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.2e-12  Score=68.49  Aligned_cols=41  Identities=27%  Similarity=0.355  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+|++.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.9e-12  Score=67.78  Aligned_cols=43  Identities=19%  Similarity=0.335  Sum_probs=38.6

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .++++|++++||.|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            3567999999999999999999999999999999997777665

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.2e-12  Score=68.53  Aligned_cols=41  Identities=24%  Similarity=0.404  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSG   42 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSS
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.2e-12  Score=68.45  Aligned_cols=41  Identities=24%  Similarity=0.349  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|.+|+++|.++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSG   42 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=7.6e-15  Score=91.86  Aligned_cols=47  Identities=17%  Similarity=0.257  Sum_probs=22.4

Q ss_pred             cccccCCCCceeccccccccccchHHHHHHhh--ccCCCcc--cccccccc
Q 041414           66 TQQSPVKPKTHECSVCGLEFAIGQALGGHMRR--HRAGASH--ANEKLSAF  112 (152)
Q Consensus        66 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~--h~~~~~~--~~~~~~~~  112 (152)
                      |+++|+++++|.|.+|++.|.....|..|+++  |.+++++  +..|++.|
T Consensus        10 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f   60 (115)
T 2dmi_A           10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRW   60 (115)
T ss_dssp             CCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCC
T ss_pred             heeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCccc
Confidence            44444445555555555555555555555554  4433332  24444444

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.33  E-value=1.4e-12  Score=68.26  Aligned_cols=41  Identities=24%  Similarity=0.374  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|.+|+++|.++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSG   42 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCS
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.33  E-value=1.3e-13  Score=82.02  Aligned_cols=51  Identities=24%  Similarity=0.364  Sum_probs=46.8

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHH-HhcCCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHR-ASHKKS   54 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~-~~h~~~   54 (152)
                      ..|++.|.....|.  .|+++|++++||.|++|++.|.....|.+|+ ++|.++
T Consensus        32 ~~Cgk~F~~~~~L~--~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           32 PVCGESFASKGAQE--RHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             TTSCCEESSHHHHH--HHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCcCcHHHHh--hhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            46999999999998  9999999999999999999999999999997 568765

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.2e-12  Score=68.51  Aligned_cols=41  Identities=29%  Similarity=0.469  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|++++++.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1e-12  Score=68.77  Aligned_cols=41  Identities=27%  Similarity=0.459  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSG   42 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.5e-12  Score=68.22  Aligned_cols=42  Identities=24%  Similarity=0.409  Sum_probs=38.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|++++||.|..|++.|.....|.+|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            478899999999999999999999999999999999988764

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.4e-12  Score=68.21  Aligned_cols=41  Identities=22%  Similarity=0.314  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSG   42 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSS
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.5e-12  Score=68.08  Aligned_cols=41  Identities=24%  Similarity=0.396  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|.+|+++|++++++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCS
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.3e-12  Score=68.49  Aligned_cols=41  Identities=27%  Similarity=0.514  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSS
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=1.3e-13  Score=84.70  Aligned_cols=52  Identities=23%  Similarity=0.368  Sum_probs=46.0

Q ss_pred             cchhcccCCCCCCCcccccc-cc---CCCcceecCcccccCCChhHHHHH-HHhcCCCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVN-MA---VADRAFECKTCNRQFPSFQALGGH-RASHKKSR   55 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~-~h---~~e~~~~C~~C~k~f~~~~~L~~h-~~~h~~~~   55 (152)
                      ..|++.|.....|.  .|++ +|   ++++||.|++||+.|...+.|..| +++|++++
T Consensus        22 ~~Cgk~F~~~~~L~--~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgek   78 (102)
T 2ghf_A           22 KYCTFQTPDLNMFT--FHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEE   78 (102)
T ss_dssp             SSCSCEESCHHHHH--HHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCC
T ss_pred             CCCCCccCCHHHHH--HHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCC
Confidence            36999999998888  9997 59   678999999999999999999999 78888743

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=8.5e-13  Score=76.65  Aligned_cols=68  Identities=18%  Similarity=0.250  Sum_probs=59.4

Q ss_pred             CCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHH
Q 041414           12 GDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQAL   91 (152)
Q Consensus        12 ~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L   91 (152)
                      ..|.  .|+++|.+++|+.|..|++.|. ...|..|+ .|.+                   ++|+.|+.|++.|. ...|
T Consensus         3 ~~L~--~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~-------------------~~~~~C~~C~~~~~-~~~l   58 (75)
T 2d9k_A            3 SGSS--GHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCG-------------------ARTELCGNCGRNVL-VKDL   58 (75)
T ss_dssp             CCCS--CCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHH-------------------HCEEECSSSCCEEE-TTGG
T ss_pred             hHHH--hhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcC-------------------CCceEcccCCCcCc-HHHH
Confidence            4556  9999999999999999999995 88999998 7765                   68999999999988 4899


Q ss_pred             HHHHhhccCCCc
Q 041414           92 GGHMRRHRAGAS  103 (152)
Q Consensus        92 ~~H~~~h~~~~~  103 (152)
                      ..|+++|.+++.
T Consensus        59 ~~H~~~c~~~~~   70 (75)
T 2d9k_A           59 KTHPEVCGREGS   70 (75)
T ss_dssp             GTHHHHBTTBSS
T ss_pred             HHHHHHccCCcC
Confidence            999999998743

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.7e-12  Score=67.98  Aligned_cols=42  Identities=29%  Similarity=0.428  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|.+++++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP   43 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=8.7e-13  Score=69.11  Aligned_cols=44  Identities=16%  Similarity=0.431  Sum_probs=37.7

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      ..+++|++++||.|++|++.|.....|..|+++|+++++|.|..
T Consensus         2 ~~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A            2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             CCSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            34678999999999999999999999999999998866555543

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.6e-12  Score=67.45  Aligned_cols=41  Identities=27%  Similarity=0.339  Sum_probs=38.2

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCC
Confidence            47889999999999999999999999999999999998875

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.32  E-value=1.5e-12  Score=68.15  Aligned_cols=42  Identities=29%  Similarity=0.493  Sum_probs=38.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|++++||.|.+|++.|.....|.+|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.4e-12  Score=68.23  Aligned_cols=41  Identities=29%  Similarity=0.423  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+|++.|.....|.+|+++|++++++.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSG   42 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.4e-12  Score=68.26  Aligned_cols=41  Identities=22%  Similarity=0.326  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.2e-12  Score=68.60  Aligned_cols=41  Identities=22%  Similarity=0.374  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.6e-12  Score=68.04  Aligned_cols=42  Identities=24%  Similarity=0.366  Sum_probs=38.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|.+|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.2e-12  Score=68.48  Aligned_cols=41  Identities=24%  Similarity=0.412  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|..|+++|.++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSG   42 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.4e-12  Score=68.20  Aligned_cols=41  Identities=24%  Similarity=0.377  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+|++.|.....|.+|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCS
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.6e-12  Score=68.06  Aligned_cols=42  Identities=21%  Similarity=0.304  Sum_probs=38.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|..|++.|.....|.+|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.5e-12  Score=68.11  Aligned_cols=41  Identities=24%  Similarity=0.427  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|++++++.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            47888999999999999999999999999999999998876

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.7e-12  Score=67.90  Aligned_cols=42  Identities=24%  Similarity=0.392  Sum_probs=38.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|.+|+++|.++++|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.7e-12  Score=68.01  Aligned_cols=41  Identities=29%  Similarity=0.385  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|.+|+++|++++++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSG   42 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.6e-12  Score=68.04  Aligned_cols=42  Identities=26%  Similarity=0.479  Sum_probs=38.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|.+|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=1.8e-12  Score=67.14  Aligned_cols=41  Identities=22%  Similarity=0.314  Sum_probs=38.1

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS   42 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCC
Confidence            47889999999999999999999999999999999998765

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.6e-12  Score=66.57  Aligned_cols=40  Identities=18%  Similarity=0.283  Sum_probs=37.2

Q ss_pred             cccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           66 TQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        66 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      |+++|++++||.|.+|++.|.....|.+|+++|.++++|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPS   40 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            6778999999999999999999999999999999998765

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.1e-12  Score=67.19  Aligned_cols=41  Identities=24%  Similarity=0.388  Sum_probs=38.0

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS   41 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998764

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.5e-12  Score=68.12  Aligned_cols=41  Identities=20%  Similarity=0.315  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+|++.|.....|.+|+++|++++++.
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.6e-12  Score=68.04  Aligned_cols=41  Identities=24%  Similarity=0.413  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSG   42 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2e-12  Score=67.64  Aligned_cols=42  Identities=21%  Similarity=0.351  Sum_probs=38.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|.+|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.8e-12  Score=67.81  Aligned_cols=42  Identities=24%  Similarity=0.393  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|.+|+++|.++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.31  E-value=2.2e-12  Score=67.49  Aligned_cols=41  Identities=22%  Similarity=0.239  Sum_probs=38.3

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSG   42 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCS
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            47788999999999999999999999999999999998876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=2.2e-12  Score=67.48  Aligned_cols=41  Identities=22%  Similarity=0.354  Sum_probs=38.3

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|.+|+++|++++++.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSG   42 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999998876

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.2e-12  Score=67.47  Aligned_cols=42  Identities=29%  Similarity=0.370  Sum_probs=38.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|..|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.2e-12  Score=67.46  Aligned_cols=42  Identities=24%  Similarity=0.341  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|.+|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            478899999999999999999999999999999999988763

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.8e-12  Score=67.81  Aligned_cols=42  Identities=21%  Similarity=0.322  Sum_probs=38.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.4e-12  Score=68.25  Aligned_cols=42  Identities=24%  Similarity=0.455  Sum_probs=38.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|++++||.|.+|++.|.....|.+|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999988764

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.3e-12  Score=66.67  Aligned_cols=41  Identities=24%  Similarity=0.346  Sum_probs=38.2

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|..|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPS   42 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998865

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.1e-12  Score=67.51  Aligned_cols=42  Identities=26%  Similarity=0.380  Sum_probs=38.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|..|++.|.....|.+|+++|.++++|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=2.5e-13  Score=84.23  Aligned_cols=74  Identities=19%  Similarity=0.226  Sum_probs=66.6

Q ss_pred             hcCCCCCCCCCCCCc---------ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc-ccccccccCCCCCc
Q 041414           50 SHKKSRVTEGSGGGV---------DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA-NEKLSAFSSLSDTA  119 (152)
Q Consensus        50 ~h~~~~~~~c~~~~~---------~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~~~~~~~~  119 (152)
                      .|+++++|.| .|+.         .|++.|.++++|.|.+|++.|.....|..|+++|.+++++. ..|++.|.....+.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            5788999999 7876         78899999999999999999999999999999999999987 89999999988887


Q ss_pred             chhhh
Q 041414          120 PLVEK  124 (152)
Q Consensus       120 ~~~~~  124 (152)
                      .+++.
T Consensus        83 ~H~~~   87 (110)
T 2csh_A           83 RHVTS   87 (110)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77654

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=2.2e-12  Score=67.48  Aligned_cols=41  Identities=24%  Similarity=0.326  Sum_probs=38.3

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSG   42 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            47888999999999999999999999999999999998876

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.2e-12  Score=67.55  Aligned_cols=42  Identities=29%  Similarity=0.469  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|.+|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.5e-12  Score=67.23  Aligned_cols=41  Identities=27%  Similarity=0.356  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|..|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.1e-12  Score=67.56  Aligned_cols=42  Identities=24%  Similarity=0.370  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|.+|+++|+++++|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.8e-12  Score=67.93  Aligned_cols=41  Identities=22%  Similarity=0.338  Sum_probs=38.3

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+|++.|.....|.+|+++|.+++++.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSG   42 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            37888999999999999999999999999999999998876

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2e-12  Score=67.68  Aligned_cols=42  Identities=21%  Similarity=0.334  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|.+|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.9e-12  Score=67.05  Aligned_cols=41  Identities=22%  Similarity=0.383  Sum_probs=38.1

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|..|+++|.+++++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPS   42 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998765

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.5e-12  Score=66.74  Aligned_cols=41  Identities=22%  Similarity=0.373  Sum_probs=37.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+|++.|.....|..|+++|.++++|.
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2en2_A            1 GSSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS   41 (42)
T ss_dssp             CCCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSC
T ss_pred             CCCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            37788999999999999999999999999999999998764

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.8e-12  Score=67.57  Aligned_cols=43  Identities=21%  Similarity=0.422  Sum_probs=37.8

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .+.++|++++||.|++|++.|.....|..|+++|+++++|.|.
T Consensus         2 s~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            4567899999999999999999999999999999886666553

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.3e-12  Score=67.45  Aligned_cols=42  Identities=21%  Similarity=0.265  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|.+|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.4e-12  Score=67.36  Aligned_cols=42  Identities=21%  Similarity=0.328  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            478889999999999999999999999999999999988763

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.5e-12  Score=68.18  Aligned_cols=42  Identities=26%  Similarity=0.479  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999988764

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.1e-12  Score=66.82  Aligned_cols=41  Identities=24%  Similarity=0.305  Sum_probs=38.2

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS   42 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCC
Confidence            47889999999999999999999999999999999998875

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3e-12  Score=67.02  Aligned_cols=42  Identities=26%  Similarity=0.387  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|.+|++.|.....|.+|+++|.++++|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            367889999999999999999999999999999999988763

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.29  E-value=3.2e-13  Score=73.93  Aligned_cols=52  Identities=19%  Similarity=0.328  Sum_probs=48.1

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSR   55 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~   55 (152)
                      ..|++.|.....|.  .|+++|++++||.|++|++.|.....|..|+++|++++
T Consensus         5 ~~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            5 EECGIRXKKPSMLK--KHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             TTTCCBCSSHHHHH--HHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCCcCcCCCHHHHH--HHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            36999999998888  99999999999999999999999999999999998754

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.29  E-value=1.5e-12  Score=68.92  Aligned_cols=34  Identities=21%  Similarity=0.491  Sum_probs=30.7

Q ss_pred             ccCCCcceecCcccccCCChhHHHHHHHhcCCCC
Q 041414           22 MAVADRAFECKTCNRQFPSFQALGGHRASHKKSR   55 (152)
Q Consensus        22 ~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~   55 (152)
                      .|.++++|.|++|++.|.....|..|+++|++++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEK   39 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCC
Confidence            5788999999999999999999999999888743

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.5e-12  Score=67.35  Aligned_cols=42  Identities=24%  Similarity=0.396  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|++++||.|.+|++.|.....|.+|+++|+++++|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            367889999999999999999999999999999999988763

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=3.6e-12  Score=66.38  Aligned_cols=40  Identities=20%  Similarity=0.407  Sum_probs=34.4

Q ss_pred             cccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           21 NMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .+|++++||.|++|++.|...+.|..|+++|+++++|.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~   42 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGP   42 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCc
Confidence            4789999999999999999999999999999885444333

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=3.2e-12  Score=66.21  Aligned_cols=41  Identities=27%  Similarity=0.391  Sum_probs=38.2

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+||+.|.....|..|+++|.++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPS   42 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTT
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcC
Confidence            47889999999999999999999999999999999998865

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.5e-12  Score=67.31  Aligned_cols=41  Identities=22%  Similarity=0.283  Sum_probs=38.2

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+|++.|.....|.+|+++|+++++|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSG   42 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCC
Confidence            36788999999999999999999999999999999998876

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.28  E-value=2.8e-12  Score=65.72  Aligned_cols=40  Identities=20%  Similarity=0.303  Sum_probs=37.3

Q ss_pred             cccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           66 TQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        66 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      |+++|++++||.|.+||+.|.....|..|+++|++++++.
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCC
Confidence            6788999999999999999999999999999999998764

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=2.2e-12  Score=66.16  Aligned_cols=40  Identities=28%  Similarity=0.476  Sum_probs=37.3

Q ss_pred             cccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           66 TQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        66 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      |+++|++++||.|.+|++.|.....|.+|+++|++++++.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS   41 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTT
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            7788999999999999999999999999999999998764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=3.9e-13  Score=76.79  Aligned_cols=54  Identities=15%  Similarity=0.250  Sum_probs=49.9

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVT   57 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~   57 (152)
                      ..|++.|.....|.  .|+++|+++++|.|++|++.|.....|..|+++|++++|.
T Consensus        13 ~~C~k~f~~~~~L~--~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A           13 SECSYSCSSKAALR--IHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SSSSCEESSHHHHH--HHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCcccCCHHHHH--HHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            36999999998888  9999999999999999999999999999999999987664

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=3e-12  Score=66.91  Aligned_cols=42  Identities=24%  Similarity=0.411  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|+++|+++++|.|..||+.|.....|.+|+++|.++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999988763

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=3.7e-12  Score=66.85  Aligned_cols=41  Identities=27%  Similarity=0.380  Sum_probs=38.3

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHh-hccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMR-RHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+||+.|.....|..|++ +|.+++++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~   43 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSG   43 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSS
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCC
Confidence            47889999999999999999999999999999 999998876

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.6e-12  Score=66.77  Aligned_cols=44  Identities=23%  Similarity=0.464  Sum_probs=37.7

Q ss_pred             ccccccCCCcceecC--cccccCCChhHHHHHHHhcCCCCCCCCCC
Q 041414           18 NGVNMAVADRAFECK--TCNRQFPSFQALGGHRASHKKSRVTEGSG   61 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~--~C~k~f~~~~~L~~h~~~h~~~~~~~c~~   61 (152)
                      .|.++|++++||.|.  .|++.|.....|..|+++|+++++|.|..
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            567899999999998  89999999999999999998865555443

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.4e-12  Score=66.34  Aligned_cols=41  Identities=24%  Similarity=0.434  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSG   42 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998876

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.5e-12  Score=66.61  Aligned_cols=41  Identities=22%  Similarity=0.348  Sum_probs=38.2

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPS   42 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCS
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998865

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.26  E-value=5.8e-12  Score=64.96  Aligned_cols=40  Identities=20%  Similarity=0.375  Sum_probs=36.0

Q ss_pred             cccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           21 NMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      ++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            5789999999999999999999999999999987766654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.26  E-value=6.1e-13  Score=80.25  Aligned_cols=56  Identities=20%  Similarity=0.219  Sum_probs=50.7

Q ss_pred             chhcccCCCCCCCccccccc-cCCCcc--------eecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414            3 NCLMFMPHGGDFDAVNGVNM-AVADRA--------FECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~-h~~e~~--------~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      .|++.|.....|.  .|+++ |+++++        |.|++|++.|.....|..|+++|++++||.|.
T Consensus        30 ~C~k~f~~~~~L~--~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           30 SCDRTFSTMHELV--THVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CCCCCCSSHHHHH--HHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             ccccccCCHHHHH--HHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            6999999998888  99998 999988        99999999999999999999999997776654

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=4.1e-12  Score=64.76  Aligned_cols=39  Identities=26%  Similarity=0.500  Sum_probs=35.3

Q ss_pred             cccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           21 NMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      ++|++++||.|++|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            578999999999999999999999999999998776654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.25  E-value=2.1e-12  Score=77.25  Aligned_cols=42  Identities=19%  Similarity=0.400  Sum_probs=35.7

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEG   59 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c   59 (152)
                      .+.++|++++||.|++|++.|...+.|..|+++|++++||.|
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C   56 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRA   56 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHC
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCccc
Confidence            455679999999999999999999999999999988444433

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=5.4e-12  Score=65.99  Aligned_cols=41  Identities=27%  Similarity=0.355  Sum_probs=38.0

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccC-CCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRA-GASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~-~~~~~  105 (152)
                      .|+++|++++||.|.+|++.|.....|..|+++|++ +++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~   43 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGP   43 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSS
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCC
Confidence            478899999999999999999999999999999999 88775

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=7e-12  Score=64.92  Aligned_cols=41  Identities=24%  Similarity=0.336  Sum_probs=37.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPS   42 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCC
Confidence            36788999999999999999999999999999999998875

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.22  E-value=8.8e-12  Score=61.99  Aligned_cols=37  Identities=22%  Similarity=0.375  Sum_probs=34.2

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCC
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      .|+++|++++||+|+.|++.|.....|.+|+++|.++
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            3788899999999999999999999999999999874

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=1.8e-12  Score=76.59  Aligned_cols=53  Identities=15%  Similarity=0.251  Sum_probs=45.8

Q ss_pred             cchhcccCCCCCCCccccccccCCC----cceecCcccccCCChhHHHHHHHhcCCCCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVAD----RAFECKTCNRQFPSFQALGGHRASHKKSRV   56 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e----~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~   56 (152)
                      ..|++.|.....|.  .|+++|.++    ++|.|++|++.|.....|..|+++|.++++
T Consensus        19 ~~C~~~f~~~~~l~--~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~   75 (86)
T 1x6h_A           19 SHCDKTFRQKQLLD--MHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG   75 (86)
T ss_dssp             SSSSCEESSHHHHH--HHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS
T ss_pred             CCCCCccCCHHHHH--HHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCC
Confidence            36899999988888  999876654    799999999999999999999999988443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=7.8e-12  Score=62.18  Aligned_cols=36  Identities=19%  Similarity=0.437  Sum_probs=33.5

Q ss_pred             cccCCCCceeccccccccccchHHHHHHhhccCCCc
Q 041414           68 QSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGAS  103 (152)
Q Consensus        68 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  103 (152)
                      ++|++++||.|..||+.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            578899999999999999999999999999999864

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.21  E-value=8e-13  Score=72.29  Aligned_cols=50  Identities=16%  Similarity=0.328  Sum_probs=45.9

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKK   53 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~   53 (152)
                      ..|++.|.....|.  .|+++|++++||.|++|++.|.....|..|+++|++
T Consensus         8 ~~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            8 SYCGKFFRSNYYLN--IHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             TTTCCBCSCHHHHH--HHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCcchhCChHHHH--HHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            36999999998888  999999999999999999999999999999998863

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.4e-11  Score=64.30  Aligned_cols=40  Identities=28%  Similarity=0.434  Sum_probs=37.1

Q ss_pred             cccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           66 TQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        66 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      ++++|+++++|.|.+|++.|.....|.+|+++|.+++++.
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCS
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCC
Confidence            4678899999999999999999999999999999998876

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.20  E-value=1.6e-11  Score=66.53  Aligned_cols=47  Identities=30%  Similarity=0.406  Sum_probs=42.9

Q ss_pred             cccCCCCceeccccccccccchHHHHHHh-hccCCCccc-ccccccccC
Q 041414           68 QSPVKPKTHECSVCGLEFAIGQALGGHMR-RHRAGASHA-NEKLSAFSS  114 (152)
Q Consensus        68 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~h~~~~~~~-~~~~~~~~~  114 (152)
                      ..|++++||.|.+|++.|.....|.+|++ +|.++++|. ..|++.|++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            35678999999999999999999999997 899999997 899999875

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.5e-11  Score=64.23  Aligned_cols=41  Identities=24%  Similarity=0.334  Sum_probs=37.5

Q ss_pred             cccccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           66 TQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        66 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .+++|+++++|.|.+|++.|.....|..|+++|+++++|..
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            45778999999999999999999999999999999988764

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=5.2e-12  Score=73.32  Aligned_cols=63  Identities=19%  Similarity=0.281  Sum_probs=54.3

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHh-hccCC-Cccc-ccccccccCCCCCcchhhhccC
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMR-RHRAG-ASHA-NEKLSAFSSLSDTAPLVEKANS  127 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~h~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~  127 (152)
                      .|+++|++++||.|.+|++.|.....|..|++ .|.++ ++|. ..|++.|.....+..+.+..+.
T Consensus         5 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             ccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            58889999999999999999999999999997 68775 6776 8999999998888777765543

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=5e-12  Score=72.51  Aligned_cols=59  Identities=24%  Similarity=0.185  Sum_probs=52.6

Q ss_pred             cccccCCCCceeccccccccccchHHHHHHhhccCCCccc-ccccccccCCCCCcchhhh
Q 041414           66 TQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA-NEKLSAFSSLSDTAPLVEK  124 (152)
Q Consensus        66 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~  124 (152)
                      +.++|+++++|.|.+|++.|.....|..|+++|.++++|. ..|++.|.....+..+++.
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~   64 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI   64 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHh
Confidence            5578899999999999999999999999999999999987 8999999988777766554

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=3.1e-12  Score=77.73  Aligned_cols=50  Identities=18%  Similarity=0.361  Sum_probs=46.2

Q ss_pred             chhccc-CCCCCCCccccccccCCCcceecCcccccCCChhHHHHH-HHhcCCCC
Q 041414            3 NCLMFM-PHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGH-RASHKKSR   55 (152)
Q Consensus         3 ~C~~~~-~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h-~~~h~~~~   55 (152)
                      .|++.| .....|.  .|+++| +++||.|.+|++.|.....|..| +++|+++.
T Consensus        39 ~C~k~F~~~~~~L~--~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           39 TCQAVGRKTIEGLK--KHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             TTCSCEESSHHHHH--HHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             CCCCCcccCHHHHH--HHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            699999 9998888  999999 99999999999999999999999 89997643

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.19  E-value=1.6e-11  Score=60.98  Aligned_cols=36  Identities=25%  Similarity=0.499  Sum_probs=33.9

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKK   53 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~   53 (152)
                      .|+++|++++||.|++|++.|.....|..|+++|++
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            478899999999999999999999999999999976

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.7e-11  Score=62.44  Aligned_cols=38  Identities=24%  Similarity=0.401  Sum_probs=35.1

Q ss_pred             cccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           68 QSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        68 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      ++|+++++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS   40 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcC
Confidence            46888999999999999999999999999999998764

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.5e-11  Score=63.98  Aligned_cols=40  Identities=30%  Similarity=0.420  Sum_probs=36.8

Q ss_pred             cccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           66 TQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        66 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      +.++|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGP   42 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCC
Confidence            4567889999999999999999999999999999998875

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.5e-11  Score=61.14  Aligned_cols=37  Identities=14%  Similarity=0.387  Sum_probs=34.0

Q ss_pred             ccccCCCcceecCcccccCCChhHHHHHHHhcCCCCC
Q 041414           20 VNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRV   56 (152)
Q Consensus        20 ~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~   56 (152)
                      +++|++++||.|++|++.|...+.|..|+++|++++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999998654

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.17  E-value=2e-11  Score=63.47  Aligned_cols=41  Identities=24%  Similarity=0.492  Sum_probs=37.1

Q ss_pred             cccCCCCceeccccccccccchHHHHHHhhccCCCccc-ccc
Q 041414           68 QSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA-NEK  108 (152)
Q Consensus        68 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~  108 (152)
                      .+|++++||.|.+|++.|.....|.+|+++|++++++. +.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~c   44 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS   44 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCC
Confidence            46888999999999999999999999999999999886 554

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.6e-11  Score=64.18  Aligned_cols=40  Identities=25%  Similarity=0.329  Sum_probs=36.8

Q ss_pred             cccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           66 TQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        66 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .+++|+++++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSG   42 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCS
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            3567889999999999999999999999999999998876

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.15  E-value=2.8e-11  Score=59.27  Aligned_cols=35  Identities=20%  Similarity=0.354  Sum_probs=32.0

Q ss_pred             ccCCCCceeccccccccccchHHHHHHhhccCCCc
Q 041414           69 SPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGAS  103 (152)
Q Consensus        69 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  103 (152)
                      +|+++++|.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            36789999999999999999999999999998864

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.15  E-value=3e-11  Score=59.20  Aligned_cols=35  Identities=17%  Similarity=0.350  Sum_probs=32.1

Q ss_pred             ccCCCCceeccccccccccchHHHHHHhhccCCCc
Q 041414           69 SPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGAS  103 (152)
Q Consensus        69 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  103 (152)
                      +|++++||.|.+||+.|.....|.+|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47789999999999999999999999999998764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.15  E-value=2.6e-11  Score=61.07  Aligned_cols=36  Identities=42%  Similarity=0.732  Sum_probs=33.0

Q ss_pred             cCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           70 PVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        70 h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      |++++||.|.+||+.|...+.|..|+++|++++++.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            567899999999999999999999999999998875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=4.2e-12  Score=77.27  Aligned_cols=63  Identities=14%  Similarity=0.079  Sum_probs=53.2

Q ss_pred             cccccCCCCceeccccccccc-cchHHHHHHhhccC-CCccc-ccccccccCCCCCcchhhhccCc
Q 041414           66 TQQSPVKPKTHECSVCGLEFA-IGQALGGHMRRHRA-GASHA-NEKLSAFSSLSDTAPLVEKANSR  128 (152)
Q Consensus        66 h~~~h~~~k~~~C~~C~k~F~-~~~~L~~H~~~h~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  128 (152)
                      |+++|.++++|.|.+|++.|. ....|..|+++|.+ +++|. ..|++.|.....+..+.+.....
T Consensus        15 h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~   80 (98)
T 2gqj_A           15 WQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA   80 (98)
T ss_dssp             HHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred             HHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence            344455588999999999999 99999999999998 88887 89999999998888887655433

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=3.9e-12  Score=70.27  Aligned_cols=51  Identities=18%  Similarity=0.350  Sum_probs=46.3

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHH-HhcCCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHR-ASHKKS   54 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~-~~h~~~   54 (152)
                      ..|++.|.....|.  .|+++|++++||.|++|++.|.....|..|+ ++|.++
T Consensus         6 ~~C~~~f~~~~~l~--~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            6 EVCTRAFARQEHLK--RHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             TTTCCCBSCHHHHH--HHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CCCccccCCHHHHH--HHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            36999999998888  9999999999999999999999999999997 678764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=8.3e-12  Score=72.61  Aligned_cols=61  Identities=16%  Similarity=0.243  Sum_probs=52.4

Q ss_pred             ccCCCCceeccccccccccchHHHHHHhhccC---CCccc-ccccccccCCCCCcchhhhccCcc
Q 041414           69 SPVKPKTHECSVCGLEFAIGQALGGHMRRHRA---GASHA-NEKLSAFSSLSDTAPLVEKANSRR  129 (152)
Q Consensus        69 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  129 (152)
                      .|+++++|.|.+|++.|.....|.+|+++|.+   +++|. ..|++.|.....+..+.+..+...
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            47889999999999999999999999999986   77876 899999999888888876554433

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.13  E-value=3.8e-11  Score=61.80  Aligned_cols=38  Identities=16%  Similarity=0.254  Sum_probs=35.4

Q ss_pred             cccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           68 QSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        68 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      ++|+++++|.|..|++.|.....|.+|+++|+++++|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGP   40 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCcc
Confidence            56888999999999999999999999999999998875

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.12  E-value=2.9e-11  Score=67.39  Aligned_cols=54  Identities=11%  Similarity=0.127  Sum_probs=47.2

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc-ccccccccCCCCCcch
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA-NEKLSAFSSLSDTAPL  121 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~~~~~~~~~~  121 (152)
                      .|+++|++++||.|+.||++|.....|.   ++|.++++|. ..|++.|.....+.+.
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            4778899999999999999999988886   8899999987 8999999987766543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=3.5e-12  Score=73.23  Aligned_cols=48  Identities=19%  Similarity=0.512  Sum_probs=45.3

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcC
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      .|++.|.....|.  .|+++|++++||.|++|++.|.....|..|+++|+
T Consensus        26 ~C~k~f~~~~~l~--~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           26 SCDRRFSRSDELT--RHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             TBCCEESSHHHHH--HHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCccCCHHHHH--HHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            6999999998888  99999999999999999999999999999999874

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.10  E-value=6.5e-11  Score=59.54  Aligned_cols=36  Identities=39%  Similarity=0.744  Sum_probs=32.6

Q ss_pred             cCCCcceecCcccccCCChhHHHHHHHhcCCCCCCC
Q 041414           23 AVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTE   58 (152)
Q Consensus        23 h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~   58 (152)
                      |++++||.|++|++.|...+.|..|+++|+++++|.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            678999999999999999999999999999977764

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=6.4e-11  Score=62.42  Aligned_cols=42  Identities=21%  Similarity=0.257  Sum_probs=37.6

Q ss_pred             ccCCCCceeccccccccccchHHHHHHhhccCCCccc-ccccc
Q 041414           69 SPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA-NEKLS  110 (152)
Q Consensus        69 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~  110 (152)
                      .|.++++|.|.+|++.|.....|.+|+++|+++++|. ..|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            4677899999999999999999999999999999987 66653

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.10  E-value=8e-11  Score=57.56  Aligned_cols=35  Identities=17%  Similarity=0.276  Sum_probs=32.2

Q ss_pred             ccCCCcceecCcccccCCChhHHHHHHHhcCCCCC
Q 041414           22 MAVADRAFECKTCNRQFPSFQALGGHRASHKKSRV   56 (152)
Q Consensus        22 ~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~   56 (152)
                      +|++++||.|++|++.|...+.|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            57899999999999999999999999999988654

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.09  E-value=9.9e-12  Score=69.92  Aligned_cols=57  Identities=16%  Similarity=0.169  Sum_probs=48.6

Q ss_pred             cccCCCCceeccccccccccchHHHHHHhh-c-cCCCccc-ccccccccCCCCCcchhhh
Q 041414           68 QSPVKPKTHECSVCGLEFAIGQALGGHMRR-H-RAGASHA-NEKLSAFSSLSDTAPLVEK  124 (152)
Q Consensus        68 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-h-~~~~~~~-~~~~~~~~~~~~~~~~~~~  124 (152)
                      ++|++++||.|..||+.|.....|..|+++ | .+++++. ..|++.|.....+..+.+.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~   62 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI   62 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHH
Confidence            567889999999999999999999999998 7 5888887 8999999887666555443

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=9.1e-11  Score=61.64  Aligned_cols=40  Identities=25%  Similarity=0.442  Sum_probs=37.0

Q ss_pred             cccccCCCCceecc--ccccccccchHHHHHHhhccCCCccc
Q 041414           66 TQQSPVKPKTHECS--VCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        66 h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      |.++|+++++|.|.  .|++.|.....|.+|+++|+++++|.
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   44 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSG   44 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCS
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            56788999999998  89999999999999999999998876

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=6.4e-11  Score=59.48  Aligned_cols=33  Identities=21%  Similarity=0.260  Sum_probs=30.4

Q ss_pred             ccCCCCceeccc--cccccccchHHHHHHhhccCC
Q 041414           69 SPVKPKTHECSV--CGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        69 ~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      .+++++||+|.+  |+++|...+.|.+|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467899999986  999999999999999999986

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.08  E-value=9.1e-11  Score=57.43  Aligned_cols=35  Identities=20%  Similarity=0.377  Sum_probs=32.2

Q ss_pred             ccCCCcceecCcccccCCChhHHHHHHHhcCCCCC
Q 041414           22 MAVADRAFECKTCNRQFPSFQALGGHRASHKKSRV   56 (152)
Q Consensus        22 ~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~   56 (152)
                      +|++++||.|.+|++.|...+.|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            58899999999999999999999999999988654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.07  E-value=3.8e-12  Score=81.04  Aligned_cols=55  Identities=18%  Similarity=0.249  Sum_probs=46.8

Q ss_pred             cCCCCceeccccccccccchHHHHHHhhccCCCccc-ccccccccCCCCCcchhhhcc
Q 041414           70 PVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA-NEKLSAFSSLSDTAPLVEKAN  126 (152)
Q Consensus        70 h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  126 (152)
                      |++++||.|.+||+.|.....|..|+++|  ++++. ..|++.|.....+..+.+...
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~  124 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKH  124 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTT
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHC
Confidence            44588999999999999999999999999  67776 899999999887777765543

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=9e-11  Score=58.22  Aligned_cols=35  Identities=20%  Similarity=0.375  Sum_probs=32.0

Q ss_pred             cccCCCCceeccccccccccc-hHHHHHHhhccCCC
Q 041414           68 QSPVKPKTHECSVCGLEFAIG-QALGGHMRRHRAGA  102 (152)
Q Consensus        68 ~~h~~~k~~~C~~C~k~F~~~-~~L~~H~~~h~~~~  102 (152)
                      ++|++++||.|..|++.|... ..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            468889999999999999999 99999999998863

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=9.2e-11  Score=58.33  Aligned_cols=35  Identities=20%  Similarity=0.246  Sum_probs=31.8

Q ss_pred             ccccCCCCceeccccccccccchHHHHH-HhhccCC
Q 041414           67 QQSPVKPKTHECSVCGLEFAIGQALGGH-MRRHRAG  101 (152)
Q Consensus        67 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H-~~~h~~~  101 (152)
                      +++|++++||+|..||+.|.....|..| +++|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            3578899999999999999999999999 8999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1e-10  Score=57.62  Aligned_cols=35  Identities=20%  Similarity=0.227  Sum_probs=31.8

Q ss_pred             cccCCCCceeccccccccccchHHHHHHhhccCCC
Q 041414           68 QSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        68 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      +.|++++||.|.+|++.|.....|.+|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            35788999999999999999999999999998763

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.05  E-value=1.1e-10  Score=65.70  Aligned_cols=38  Identities=21%  Similarity=0.219  Sum_probs=33.9

Q ss_pred             ccCCCCceeccc--cccccccchHHHHHH-hhccCCCcccc
Q 041414           69 SPVKPKTHECSV--CGLEFAIGQALGGHM-RRHRAGASHAN  106 (152)
Q Consensus        69 ~h~~~k~~~C~~--C~k~F~~~~~L~~H~-~~h~~~~~~~~  106 (152)
                      ..+++|||+|..  |+++|.+.++|.+|+ ++|++++|+..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            457899999975  999999999999998 68999999873

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.05  E-value=1.9e-10  Score=64.78  Aligned_cols=39  Identities=26%  Similarity=0.258  Sum_probs=34.3

Q ss_pred             ccCCCcceecCc--ccccCCChhHHHHHH-HhcCCCCCCCCC
Q 041414           22 MAVADRAFECKT--CNRQFPSFQALGGHR-ASHKKSRVTEGS   60 (152)
Q Consensus        22 ~h~~e~~~~C~~--C~k~f~~~~~L~~h~-~~h~~~~~~~c~   60 (152)
                      .++++|||.|.+  |+++|...++|..|+ ++|++++|+.|.
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            468999999976  999999999999997 689998887654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.5e-10  Score=57.07  Aligned_cols=35  Identities=29%  Similarity=0.449  Sum_probs=31.8

Q ss_pred             cccCCCCceeccccccccccchHHHHHHhhccCCC
Q 041414           68 QSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        68 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      ..|++++||+|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            35788999999999999999999999999998863

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.4e-10  Score=57.07  Aligned_cols=34  Identities=29%  Similarity=0.463  Sum_probs=31.5

Q ss_pred             ccCCCCceeccccccccccchHHHHHHhhccCCC
Q 041414           69 SPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        69 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      +|.+++||.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            5788999999999999999999999999998863

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.5e-10  Score=57.55  Aligned_cols=35  Identities=14%  Similarity=0.248  Sum_probs=32.0

Q ss_pred             ccccCCCcceecCcccccCCChhHHHHH-HHhcCCC
Q 041414           20 VNMAVADRAFECKTCNRQFPSFQALGGH-RASHKKS   54 (152)
Q Consensus        20 ~~~h~~e~~~~C~~C~k~f~~~~~L~~h-~~~h~~~   54 (152)
                      +++|++++||.|++|++.|...+.|..| +++|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            4689999999999999999999999999 8999763

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=2.3e-10  Score=56.28  Aligned_cols=34  Identities=35%  Similarity=0.524  Sum_probs=31.4

Q ss_pred             ccCCCCceeccccccccccchHHHHHHhhccCCC
Q 041414           69 SPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        69 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      +|.++++|.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5778999999999999999999999999999874

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=2e-10  Score=57.27  Aligned_cols=35  Identities=23%  Similarity=0.382  Sum_probs=32.2

Q ss_pred             cCCCCceecc--ccccccccchHHHHHHhhccCCCcc
Q 041414           70 PVKPKTHECS--VCGLEFAIGQALGGHMRRHRAGASH  104 (152)
Q Consensus        70 h~~~k~~~C~--~C~k~F~~~~~L~~H~~~h~~~~~~  104 (152)
                      |++++||.|.  .|++.|.....|.+|+++|++++++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5679999999  5999999999999999999999875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.00  E-value=1.9e-10  Score=55.68  Aligned_cols=32  Identities=19%  Similarity=0.326  Sum_probs=29.8

Q ss_pred             CceeccccccccccchHHHHHHhhccCCCccc
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      +||.|.+||+.|...+.|..|+++|++++++.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58999999999999999999999999998763

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.99  E-value=2.1e-10  Score=60.49  Aligned_cols=36  Identities=22%  Similarity=0.394  Sum_probs=29.9

Q ss_pred             ccCCCCceeccccccccccchHHHHHHh-hccCCCcc
Q 041414           69 SPVKPKTHECSVCGLEFAIGQALGGHMR-RHRAGASH  104 (152)
Q Consensus        69 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~h~~~~~~  104 (152)
                      +|++++||.|.+||+.|.....|.+|++ +|+++...
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            4788999999999999999999999999 99988553

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=3.8e-10  Score=56.59  Aligned_cols=33  Identities=21%  Similarity=0.349  Sum_probs=30.4

Q ss_pred             ccCCCcceecCc--ccccCCChhHHHHHHHhcCCC
Q 041414           22 MAVADRAFECKT--CNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        22 ~h~~e~~~~C~~--C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      .+++++||.|++  |+++|..++.|.+|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            468999999986  999999999999999999875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.98  E-value=2.2e-11  Score=69.70  Aligned_cols=47  Identities=21%  Similarity=0.481  Sum_probs=43.3

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecCc--ccccCCChhHHHHHHHhc
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECKT--CNRQFPSFQALGGHRASH   51 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~--C~k~f~~~~~L~~h~~~h   51 (152)
                      .|++.|.....|.  .|+++|++++||.|.+  |++.|.....|..|+++|
T Consensus        24 ~C~k~f~~~~~L~--~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           24 GCGKTYFKSSHLK--AHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             TTCCEESSHHHHH--HHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCccccCCHHHHH--HHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4999999998888  9999999999999975  999999999999998765

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=2.9e-10  Score=56.30  Aligned_cols=34  Identities=24%  Similarity=0.370  Sum_probs=31.7

Q ss_pred             cccCCCcceecCcccccCCCh-hHHHHHHHhcCCC
Q 041414           21 NMAVADRAFECKTCNRQFPSF-QALGGHRASHKKS   54 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~-~~L~~h~~~h~~~   54 (152)
                      ++|++++||.|++|++.|... +.|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            578999999999999999999 9999999999875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=3.5e-10  Score=55.66  Aligned_cols=34  Identities=26%  Similarity=0.459  Sum_probs=31.0

Q ss_pred             ccCCCCceeccccccccccchHHHHHHhhccCCC
Q 041414           69 SPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        69 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      .|.+++||.|..|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4677899999999999999999999999999863

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=6.6e-10  Score=54.62  Aligned_cols=34  Identities=21%  Similarity=0.407  Sum_probs=31.5

Q ss_pred             cccCCCcceecCcccccCCChhHHHHHHHhcCCC
Q 041414           21 NMAVADRAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      ..|++++||.|++|++.|...+.|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            3688999999999999999999999999999875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=6.1e-10  Score=54.66  Aligned_cols=34  Identities=15%  Similarity=0.318  Sum_probs=31.5

Q ss_pred             cccCCCcceecCcccccCCChhHHHHHHHhcCCC
Q 041414           21 NMAVADRAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      .+|++++||.|++|++.|.....|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            3688999999999999999999999999999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=5.3e-10  Score=54.97  Aligned_cols=34  Identities=18%  Similarity=0.400  Sum_probs=31.3

Q ss_pred             cccCCCcceecCcccccCCChhHHHHHHHhcCCC
Q 041414           21 NMAVADRAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      ..|++++||.|.+|++.|...+.|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            3688999999999999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=1.1e-09  Score=61.61  Aligned_cols=38  Identities=18%  Similarity=0.317  Sum_probs=33.5

Q ss_pred             ccCCCCceeccccccccccchHHHHHHhhccCCCcccc
Q 041414           69 SPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        69 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .+.+++||+|.+|++.|.....|.+|+++|+++.....
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~   44 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLG   44 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCccccc
Confidence            46779999999999999999999999999999865443

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=4.3e-11  Score=67.40  Aligned_cols=50  Identities=12%  Similarity=0.151  Sum_probs=44.8

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecC-cccccCCChhHHHHHHHhcCCCCC
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECK-TCNRQFPSFQALGGHRASHKKSRV   56 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~-~C~k~f~~~~~L~~h~~~h~~~~~   56 (152)
                      .|++.|. ...|.  .|+++ ++++||.|+ +|++.|...+.|..|+++|...++
T Consensus        15 ~C~k~f~-~~~L~--~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           15 YCTKEFV-FDTIQ--SHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             SSCCEEE-HHHHH--HHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             ccCCccC-HHHHH--HHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            5899999 87777  99999 999999999 999999999999999999876543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.92  E-value=5.7e-10  Score=58.80  Aligned_cols=35  Identities=23%  Similarity=0.450  Sum_probs=30.0

Q ss_pred             ccCCCcceecCcccccCCChhHHHHHHH-hcCCCCC
Q 041414           22 MAVADRAFECKTCNRQFPSFQALGGHRA-SHKKSRV   56 (152)
Q Consensus        22 ~h~~e~~~~C~~C~k~f~~~~~L~~h~~-~h~~~~~   56 (152)
                      +|++++||.|.+|++.|....+|..|++ +|.++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            5899999999999999999999999999 9987643

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=1.1e-09  Score=53.68  Aligned_cols=33  Identities=21%  Similarity=0.476  Sum_probs=31.0

Q ss_pred             ccCCCcceecCcccccCCChhHHHHHHHhcCCC
Q 041414           22 MAVADRAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        22 ~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      +|++++||.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            678999999999999999999999999999875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.91  E-value=7.6e-10  Score=55.07  Aligned_cols=35  Identities=23%  Similarity=0.476  Sum_probs=32.2

Q ss_pred             cCCCcceecC--cccccCCChhHHHHHHHhcCCCCCC
Q 041414           23 AVADRAFECK--TCNRQFPSFQALGGHRASHKKSRVT   57 (152)
Q Consensus        23 h~~e~~~~C~--~C~k~f~~~~~L~~h~~~h~~~~~~   57 (152)
                      |++++||.|.  .|++.|...+.|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            6789999999  5999999999999999999997765

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.89  E-value=8.6e-10  Score=54.67  Aligned_cols=34  Identities=32%  Similarity=0.633  Sum_probs=30.6

Q ss_pred             ccCCCCceeccc--cccccccchHHHHHHhhccCCC
Q 041414           69 SPVKPKTHECSV--CGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        69 ~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      .|++++||.|.+  ||+.|...+.|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            367899999995  9999999999999999999874

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.89  E-value=1.3e-09  Score=52.59  Aligned_cols=32  Identities=22%  Similarity=0.396  Sum_probs=29.4

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCCCCCC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKSRVTE   58 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~   58 (152)
                      +||.|++|++.|...+.|..|+++|++++++.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58999999999999999999999999987763

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=8.2e-11  Score=67.13  Aligned_cols=50  Identities=12%  Similarity=0.277  Sum_probs=41.4

Q ss_pred             cchhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414            2 ANCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      ..|++.|.....|.  .       +++|.|++|++.|.....|..|+++|+++++|.|.
T Consensus        22 ~~C~k~f~~~~~l~--~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   71 (73)
T 2ctu_A           22 SKCGIIFIRRSTLS--R-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPS   71 (73)
T ss_dssp             SSSCCEEECCCCCC--C-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCC
T ss_pred             CcccchhCCHHHhC--c-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCC
Confidence            36899999998887  3       78999999999999999999998888775554443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.88  E-value=6e-10  Score=58.38  Aligned_cols=37  Identities=22%  Similarity=0.333  Sum_probs=32.6

Q ss_pred             cccccCCCCceecc--ccccccccchHHHHHHhhccCCC
Q 041414           66 TQQSPVKPKTHECS--VCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        66 h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      +...|++++||.|.  .||+.|...+.|.+|+++|++++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            44568889999996  79999999999999999999874

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.9e-09  Score=52.89  Aligned_cols=33  Identities=24%  Similarity=0.506  Sum_probs=30.7

Q ss_pred             ccCCCcceecCcccccCCChhHHHHHHHhcCCC
Q 041414           22 MAVADRAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        22 ~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      .|++++||.|++|++.|.....|..|+++|+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            578899999999999999999999999999875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.85  E-value=1.3e-09  Score=57.04  Aligned_cols=38  Identities=24%  Similarity=0.512  Sum_probs=33.8

Q ss_pred             ccccccCCCcceecC--cccccCCChhHHHHHHHhcCCCC
Q 041414           18 NGVNMAVADRAFECK--TCNRQFPSFQALGGHRASHKKSR   55 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~--~C~k~f~~~~~L~~h~~~h~~~~   55 (152)
                      .|+.+|++++||.|+  .|++.|...+.|..|+++|++++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            556679999999996  79999999999999999998753

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.83  E-value=1.7e-10  Score=55.49  Aligned_cols=31  Identities=19%  Similarity=0.342  Sum_probs=29.0

Q ss_pred             CceeccccccccccchHHHHHHhhccCCCcc
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRAGASH  104 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~  104 (152)
                      +||.|..||+.|...+.|..|+++|++++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999999875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.82  E-value=2.4e-09  Score=50.02  Aligned_cols=30  Identities=23%  Similarity=0.441  Sum_probs=27.6

Q ss_pred             CCceeccccccccccchHHHHHHhhccCCC
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      ++||.|..||+.|.....|..|+++|.+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            479999999999999999999999998863

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.81  E-value=2.7e-09  Score=49.55  Aligned_cols=29  Identities=21%  Similarity=0.320  Sum_probs=26.9

Q ss_pred             CceeccccccccccchHHHHHHhhccCCC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      +||.|..||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999998863

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.78  E-value=3.6e-09  Score=52.33  Aligned_cols=33  Identities=15%  Similarity=0.282  Sum_probs=30.3

Q ss_pred             ccCCCcceecCc--ccccCCChhHHHHHHHhcCCC
Q 041414           22 MAVADRAFECKT--CNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        22 ~h~~e~~~~C~~--C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      .|++++||.|.+  |++.|...+.|..|+++|+++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            478999999995  999999999999999999875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.76  E-value=4.1e-09  Score=48.86  Aligned_cols=29  Identities=31%  Similarity=0.563  Sum_probs=26.7

Q ss_pred             CceeccccccccccchHHHHHHhhccCCC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      +||.|..||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            48999999999999999999999998763

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.76  E-value=5.2e-09  Score=49.81  Aligned_cols=30  Identities=23%  Similarity=0.431  Sum_probs=27.5

Q ss_pred             CCceecc--ccccccccchHHHHHHhhccCCC
Q 041414           73 PKTHECS--VCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        73 ~k~~~C~--~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      ++||.|.  .||+.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4789999  89999999999999999999863

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.76  E-value=4e-09  Score=48.61  Aligned_cols=28  Identities=32%  Similarity=0.695  Sum_probs=25.9

Q ss_pred             CCceeccccccccccchHHHHHHhhccC
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~  100 (152)
                      ++||.|..||+.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4789999999999999999999999874

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.75  E-value=3e-09  Score=52.54  Aligned_cols=26  Identities=27%  Similarity=0.512  Sum_probs=24.7

Q ss_pred             cCCCcceecCcccccCCChhHHHHHH
Q 041414           23 AVADRAFECKTCNRQFPSFQALGGHR   48 (152)
Q Consensus        23 h~~e~~~~C~~C~k~f~~~~~L~~h~   48 (152)
                      +++|+||.|++|+++|...++|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            57899999999999999999999998

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=2.9e-09  Score=63.43  Aligned_cols=40  Identities=15%  Similarity=0.293  Sum_probs=36.7

Q ss_pred             cccccCCCCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           66 TQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        66 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      +.++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~   55 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKR   55 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcc
Confidence            4467889999999999999999999999999999998876

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.74  E-value=5.3e-09  Score=47.81  Aligned_cols=27  Identities=30%  Similarity=0.448  Sum_probs=25.1

Q ss_pred             CCceeccccccccccchHHHHHHhhcc
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~   99 (152)
                      ++||.|..||+.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            479999999999999999999999884

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.74  E-value=4e-09  Score=48.34  Aligned_cols=27  Identities=22%  Similarity=0.454  Sum_probs=25.0

Q ss_pred             CCceeccccccccccchHHHHHHhhcc
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~   99 (152)
                      ++||+|..||+.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999999874

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.73  E-value=4.7e-09  Score=48.57  Aligned_cols=29  Identities=28%  Similarity=0.571  Sum_probs=26.8

Q ss_pred             CceeccccccccccchHHHHHHhhccCCC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      +||.|.+||+.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999998863

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.73  E-value=4.8e-09  Score=48.49  Aligned_cols=29  Identities=31%  Similarity=0.578  Sum_probs=26.8

Q ss_pred             CceeccccccccccchHHHHHHhhccCCC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      +||.|..||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999998863

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.72  E-value=7.3e-09  Score=48.25  Aligned_cols=29  Identities=24%  Similarity=0.449  Sum_probs=26.9

Q ss_pred             CceeccccccccccchHHHHHHhhccCCC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      ++|.|..||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            47999999999999999999999999875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.71  E-value=6.6e-09  Score=49.11  Aligned_cols=29  Identities=28%  Similarity=0.595  Sum_probs=26.6

Q ss_pred             Cceecc--ccccccccchHHHHHHhhccCCC
Q 041414           74 KTHECS--VCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        74 k~~~C~--~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      +||.|.  .||+.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999999863

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.71  E-value=6.2e-09  Score=51.39  Aligned_cols=26  Identities=31%  Similarity=0.645  Sum_probs=24.7

Q ss_pred             cCCCCceeccccccccccchHHHHHH
Q 041414           70 PVKPKTHECSVCGLEFAIGQALGGHM   95 (152)
Q Consensus        70 h~~~k~~~C~~C~k~F~~~~~L~~H~   95 (152)
                      +.+++||+|.+||++|.+.++|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            56899999999999999999999998

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.16  E-value=1.7e-09  Score=50.36  Aligned_cols=29  Identities=31%  Similarity=0.669  Sum_probs=26.7

Q ss_pred             CceeccccccccccchHHHHHHhhccCCC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      +||.|..||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            58999999999999999999999998763

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.16  E-value=1.7e-09  Score=50.63  Aligned_cols=30  Identities=33%  Similarity=0.411  Sum_probs=27.3

Q ss_pred             CCceeccccccccccchHHHHHHhhccCCC
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      ++||.|..||+.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            478999999999999999999999998763

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.68  E-value=1.4e-08  Score=57.04  Aligned_cols=35  Identities=20%  Similarity=0.351  Sum_probs=31.9

Q ss_pred             cccCCCcceecCcccccCCChhHHHHHHHhcCCCC
Q 041414           21 NMAVADRAFECKTCNRQFPSFQALGGHRASHKKSR   55 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~   55 (152)
                      ..+.+++||.|.+|++.|...+.|..|+++|++..
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            35788999999999999999999999999999854

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.67  E-value=1.6e-08  Score=47.05  Aligned_cols=29  Identities=21%  Similarity=0.515  Sum_probs=26.9

Q ss_pred             CcceecCcccccCCChhHHHHHHHhcCCC
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      ++||.|.+|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            57999999999999999999999999875

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.66  E-value=1.1e-08  Score=46.59  Aligned_cols=27  Identities=30%  Similarity=0.524  Sum_probs=24.0

Q ss_pred             ceeccccccccccchHHHHHHhhccCC
Q 041414           75 THECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      ||.|..||+.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            689999999999999999999999864

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.63  E-value=1.4e-08  Score=47.37  Aligned_cols=29  Identities=24%  Similarity=0.440  Sum_probs=26.2

Q ss_pred             CceeccccccccccchHHHHH-HhhccCCC
Q 041414           74 KTHECSVCGLEFAIGQALGGH-MRRHRAGA  102 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H-~~~h~~~~  102 (152)
                      +||.|..||+.|.....|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            589999999999999999999 78998863

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.62  E-value=9.3e-10  Score=52.77  Aligned_cols=31  Identities=26%  Similarity=0.392  Sum_probs=27.9

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCCCCC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKSRVT   57 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~   57 (152)
                      +||.|++|++.|...+.|..|+++|++++|+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999887765

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.61  E-value=2.5e-08  Score=45.45  Aligned_cols=27  Identities=26%  Similarity=0.660  Sum_probs=25.1

Q ss_pred             CcceecCcccccCCChhHHHHHHHhcC
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      ++||.|++||+.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            579999999999999999999999874

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.60  E-value=2.3e-08  Score=46.18  Aligned_cols=28  Identities=25%  Similarity=0.465  Sum_probs=26.1

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      +||.|++|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            5899999999999999999999999875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.60  E-value=2.2e-08  Score=45.95  Aligned_cols=28  Identities=21%  Similarity=0.554  Sum_probs=25.7

Q ss_pred             CcceecCcccccCCChhHHHHHHHhcCC
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRASHKK   53 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~h~~   53 (152)
                      ++||.|++|++.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            5799999999999999999999998864

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.60  E-value=3.5e-08  Score=45.51  Aligned_cols=28  Identities=36%  Similarity=0.718  Sum_probs=26.0

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      +||.|++|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            5899999999999999999999999875

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.59  E-value=3.6e-08  Score=46.75  Aligned_cols=29  Identities=31%  Similarity=0.721  Sum_probs=26.9

Q ss_pred             CcceecC--cccccCCChhHHHHHHHhcCCC
Q 041414           26 DRAFECK--TCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        26 e~~~~C~--~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      ++||.|+  .|++.|...+.|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            5799999  8999999999999999999875

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.58  E-value=1.8e-08  Score=46.02  Aligned_cols=27  Identities=22%  Similarity=0.607  Sum_probs=24.9

Q ss_pred             CcceecCcccccCCChhHHHHHHHhcC
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      ++||.|++|++.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            579999999999999999999998874

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.98  E-value=7e-09  Score=46.94  Aligned_cols=26  Identities=35%  Similarity=0.709  Sum_probs=24.1

Q ss_pred             CceeccccccccccchHHHHHHhhcc
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~   99 (152)
                      +||.|.+||+.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999999874

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.55  E-value=5.3e-08  Score=45.14  Aligned_cols=29  Identities=14%  Similarity=0.407  Sum_probs=26.5

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCCC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKSR   55 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~~   55 (152)
                      +||.|++|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            57999999999999999999999998764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.55  E-value=3.6e-08  Score=45.41  Aligned_cols=28  Identities=25%  Similarity=0.559  Sum_probs=26.1

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      +||.|.+|++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            5899999999999999999999999875

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.55  E-value=4.1e-08  Score=45.19  Aligned_cols=28  Identities=21%  Similarity=0.553  Sum_probs=26.0

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      +||.|++|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            5899999999999999999999999875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.53  E-value=5.5e-08  Score=45.76  Aligned_cols=28  Identities=29%  Similarity=0.686  Sum_probs=25.9

Q ss_pred             cceecC--cccccCCChhHHHHHHHhcCCC
Q 041414           27 RAFECK--TCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        27 ~~~~C~--~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      +||.|+  .|++.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            589998  9999999999999999999875

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.91  E-value=1.3e-08  Score=47.49  Aligned_cols=29  Identities=31%  Similarity=0.531  Sum_probs=26.5

Q ss_pred             CcceecCcccccCCChhHHHHHHHhcCCC
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      ++||.|+.|++.|...+.|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            47899999999999999999999999864

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.88  E-value=1.5e-08  Score=46.97  Aligned_cols=28  Identities=21%  Similarity=0.508  Sum_probs=25.7

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      +||.|++|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            5899999999999999999999999874

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.46  E-value=8.5e-08  Score=43.43  Aligned_cols=26  Identities=35%  Similarity=0.719  Sum_probs=23.7

Q ss_pred             ceecCcccccCCChhHHHHHHHhcCC
Q 041414           28 AFECKTCNRQFPSFQALGGHRASHKK   53 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h~~   53 (152)
                      ||.|.+|++.|...+.|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            68999999999999999999999876

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.45  E-value=8.9e-08  Score=44.06  Aligned_cols=27  Identities=26%  Similarity=0.461  Sum_probs=25.0

Q ss_pred             Cceecc--ccccccccchHHHHHHhhccC
Q 041414           74 KTHECS--VCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        74 k~~~C~--~C~k~F~~~~~L~~H~~~h~~  100 (152)
                      ++|.|.  .||+.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            479999  999999999999999999874

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.41  E-value=1.1e-07  Score=44.13  Aligned_cols=28  Identities=32%  Similarity=0.622  Sum_probs=25.3

Q ss_pred             cceecCcccccCCChhHHHHH-HHhcCCC
Q 041414           27 RAFECKTCNRQFPSFQALGGH-RASHKKS   54 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h-~~~h~~~   54 (152)
                      +||.|+.|++.|...+.|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            589999999999999999999 6888775

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.75  E-value=3.9e-08  Score=44.34  Aligned_cols=26  Identities=23%  Similarity=0.662  Sum_probs=23.8

Q ss_pred             cceecCcccccCCChhHHHHHHHhcC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      +||.|++||+.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999998873

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.24  E-value=4.9e-07  Score=41.42  Aligned_cols=27  Identities=26%  Similarity=0.623  Sum_probs=24.7

Q ss_pred             cceecC--cccccCCChhHHHHHHHhcCC
Q 041414           27 RAFECK--TCNRQFPSFQALGGHRASHKK   53 (152)
Q Consensus        27 ~~~~C~--~C~k~f~~~~~L~~h~~~h~~   53 (152)
                      +||.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            479999  999999999999999999864

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=5.2e-07  Score=51.86  Aligned_cols=56  Identities=14%  Similarity=0.131  Sum_probs=45.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCCCccc-ccccccccCCCCCcchhh
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGASHA-NEKLSAFSSLSDTAPLVE  123 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~  123 (152)
                      .|++.|.+++|+.|..|++.|. ...|..|+ .|.+++++. ..|++.|.. ..+..+..
T Consensus         7 ~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~   63 (75)
T 2d9k_A            7 GHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPE   63 (75)
T ss_dssp             CCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHH
T ss_pred             hhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHH
Confidence            5777888899999999999995 89999999 899999987 789887764 55555543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.53  E-value=1.8e-05  Score=49.57  Aligned_cols=30  Identities=23%  Similarity=0.340  Sum_probs=27.3

Q ss_pred             cccCCCCceeccccccccccchHHHHHHhh
Q 041414           68 QSPVKPKTHECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        68 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      ..|+|+++|.|..|++.|.+.+.|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            457889999999999999999999999874

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.44  E-value=0.00038  Score=38.43  Aligned_cols=53  Identities=15%  Similarity=0.224  Sum_probs=41.6

Q ss_pred             cccccCCChhHHHHHH-HhcCCCCCCCCCCCCcccccccCCCCceecc--ccccccccchHHHHHHhhc
Q 041414           33 TCNRQFPSFQALGGHR-ASHKKSRVTEGSGGGVDTQQSPVKPKTHECS--VCGLEFAIGQALGGHMRRH   98 (152)
Q Consensus        33 ~C~k~f~~~~~L~~h~-~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~h   98 (152)
                      .|++.|.....|..|+ ..|.+.++-             ....+|.|.  .|++.+.....|..|+++.
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~-------------~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFK-------------HPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCC-------------CSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccC-------------CCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            4999999999999998 468765321             012479997  6999999999999999864

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.31  E-value=4.1e-05  Score=47.89  Aligned_cols=30  Identities=23%  Similarity=0.268  Sum_probs=27.4

Q ss_pred             cccCCCcceecCcccccCCChhHHHHHHHh
Q 041414           21 NMAVADRAFECKTCNRQFPSFQALGGHRAS   50 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~   50 (152)
                      ..|+|++||.|..|++.|.+.+.|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            568999999999999999999999999764

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.95  E-value=0.0026  Score=40.01  Aligned_cols=70  Identities=19%  Similarity=0.255  Sum_probs=48.6

Q ss_pred             cceecCcccccCCChhHHHHHH--HhcCCC-CCCC----------CCCCC-cccccccCCCCceeccccccccccchHHH
Q 041414           27 RAFECKTCNRQFPSFQALGGHR--ASHKKS-RVTE----------GSGGG-VDTQQSPVKPKTHECSVCGLEFAIGQALG   92 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~--~~h~~~-~~~~----------c~~~~-~~h~~~h~~~k~~~C~~C~k~F~~~~~L~   92 (152)
                      +++.|.+|+..|.+.+.+..|.  +.|... +.+.          ..... ..+...+.+.+.|-|..|++.|.+...|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            5789999999999999999987  445321 1000          00000 01223455677899999999999999999


Q ss_pred             HHHh
Q 041414           93 GHMR   96 (152)
Q Consensus        93 ~H~~   96 (152)
                      .|..
T Consensus       111 ~H~~  114 (127)
T 1zu1_A          111 SHYI  114 (127)
T ss_dssp             HHHT
T ss_pred             HHHC
Confidence            9985

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.89  E-value=0.00014  Score=40.27  Aligned_cols=48  Identities=13%  Similarity=0.193  Sum_probs=40.1

Q ss_pred             cchhcccCCCCCCCccccc-cccCCCc------ceecC--cccccCCChhHHHHHHHhc
Q 041414            2 ANCLMFMPHGGDFDAVNGV-NMAVADR------AFECK--TCNRQFPSFQALGGHRASH   51 (152)
Q Consensus         2 ~~C~~~~~~~~~~~~~~h~-~~h~~e~------~~~C~--~C~k~f~~~~~L~~h~~~h   51 (152)
                      ..|++.|.+...|.  .|+ ..|.+.+      +|.|.  .|++.+.....|..|+++.
T Consensus         7 ~~C~~~f~~~~~l~--~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECPESASSLFDLQ--RHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCCCCCSSHHHHH--HHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHH--HHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            36999999998887  898 4787665      89996  7999999999999998864

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.25  E-value=0.0046  Score=31.51  Aligned_cols=28  Identities=29%  Similarity=0.516  Sum_probs=24.0

Q ss_pred             CceeccccccccccchHHHHHHhhccCC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      -+|.|+.|++.|.....|+.||+---++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcc
Confidence            5799999999999999999999954333

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.97  E-value=0.0065  Score=30.95  Aligned_cols=24  Identities=38%  Similarity=0.556  Sum_probs=22.3

Q ss_pred             cceecCcccccCCChhHHHHHHHh
Q 041414           27 RAFECKTCNRQFPSFQALGGHRAS   50 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~   50 (152)
                      .+|.|+.|+..|.....|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            689999999999999999999974

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.68  E-value=0.14  Score=33.43  Aligned_cols=33  Identities=15%  Similarity=0.265  Sum_probs=22.8

Q ss_pred             CCCCceeccccccccccchHHHHHHhhccCCCcc
Q 041414           71 VKPKTHECSVCGLEFAIGQALGGHMRRHRAGASH  104 (152)
Q Consensus        71 ~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~  104 (152)
                      -..++-.|+.|+..|.. ..|..|..++.|+.++
T Consensus       133 C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          133 CPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             CTTCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             CCCCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            34567789999888764 5678999999888664

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=91.39  E-value=0.14  Score=29.76  Aligned_cols=30  Identities=23%  Similarity=0.418  Sum_probs=24.5

Q ss_pred             CCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      +....|-+||+.|..   |++|+.+|+|..|..
T Consensus        19 ~d~iiClecGK~fK~---LkRHL~~~hgltpee   48 (87)
T 2jsp_A           19 DDHIVCLECGGSFKS---LKRHLTTHHSMTPEE   48 (87)
T ss_dssp             SSCEECTBTCCEESB---HHHHHHHTTCSCHHH
T ss_pred             CCceEecccchhhHH---HHHHHHHccCCCHHH
Confidence            455789999999995   889999987776654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.00  E-value=0.18  Score=23.87  Aligned_cols=26  Identities=23%  Similarity=0.336  Sum_probs=22.4

Q ss_pred             ceeccccccccccchHHHHHHhh-ccC
Q 041414           75 THECSVCGLEFAIGQALGGHMRR-HRA  100 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~-h~~  100 (152)
                      .|.|++|-+.|.+...|..|... |..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            59999999999999999999864 543

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=88.70  E-value=0.35  Score=23.02  Aligned_cols=25  Identities=20%  Similarity=0.360  Sum_probs=22.2

Q ss_pred             CCceeccccccccccchHHHHHHhh
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      ...+.|..|+-+|.....+..|++-
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhee
Confidence            4578999999999999999999874

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=88.29  E-value=0.35  Score=27.44  Aligned_cols=48  Identities=19%  Similarity=0.422  Sum_probs=34.4

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHH
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHM   95 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~   95 (152)
                      --|.|+.||..+.. ..|..|...-.+                   ...|.|..|++.|... ..+.|.
T Consensus         9 V~F~C~~Cgd~lKK-~kv~~H~~~Cr~-------------------~~~~SCIDC~~~F~~~-~y~~Ht   56 (79)
T 1wjv_A            9 VFFTCNACGESVKK-IQVEKHVSNCRN-------------------CECLSCIDCGKDFWGD-DYKSHV   56 (79)
T ss_dssp             CEEEESSSCCEEET-THHHHHHHHCTT-------------------CCEEEETTTTEEEEGG-GTTTCC
T ss_pred             eEEEcCCCCCeeec-ccchhHHhhCCC-------------------CCcEEecccCCeeCCC-CEeCEe
Confidence            45899999998874 568888654332                   2469999999999853 345554

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=86.39  E-value=0.43  Score=24.92  Aligned_cols=21  Identities=19%  Similarity=0.439  Sum_probs=19.0

Q ss_pred             eecCcccccCCChhHHHHHHH
Q 041414           29 FECKTCNRQFPSFQALGGHRA   49 (152)
Q Consensus        29 ~~C~~C~k~f~~~~~L~~h~~   49 (152)
                      -.|..|+..|....+|..|+-
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            689999999999999999874

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=85.24  E-value=0.78  Score=28.51  Aligned_cols=29  Identities=28%  Similarity=0.313  Sum_probs=24.7

Q ss_pred             cccCCCcceecCcccccCCChhHHHHHHH
Q 041414           21 NMAVADRAFECKTCNRQFPSFQALGGHRA   49 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~~~L~~h~~   49 (152)
                      ..+.+.+.|.|.+|++.|.+...+..|..
T Consensus        86 ~~~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           86 ISDGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             CSSCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             cccCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            34566788999999999999999999874

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=83.47  E-value=0.53  Score=28.28  Aligned_cols=12  Identities=25%  Similarity=0.858  Sum_probs=8.9

Q ss_pred             cceecCcccccC
Q 041414           27 RAFECKTCNRQF   38 (152)
Q Consensus        27 ~~~~C~~C~k~f   38 (152)
                      .||.|..||..|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            467777777777

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=83.09  E-value=0.62  Score=31.56  Aligned_cols=29  Identities=21%  Similarity=0.389  Sum_probs=24.4

Q ss_pred             CCceecccccccccc-chHHHHHHhhccCC
Q 041414           73 PKTHECSVCGLEFAI-GQALGGHMRRHRAG  101 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~-~~~L~~H~~~h~~~  101 (152)
                      ..|.+|..|++.|.. ...|+.|+..|-.+
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e~~~  196 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEEYDD  196 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHHHHH
Confidence            458999999999987 89999999876543

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.64  E-value=0.46  Score=26.86  Aligned_cols=27  Identities=22%  Similarity=0.421  Sum_probs=20.8

Q ss_pred             ceeccccccccc-------cchHHHHHHhhccCC
Q 041414           75 THECSVCGLEFA-------IGQALGGHMRRHRAG  101 (152)
Q Consensus        75 ~~~C~~C~k~F~-------~~~~L~~H~~~h~~~  101 (152)
                      --.|..|++.+.       ..++|.+|++..+.+
T Consensus        28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~   61 (76)
T 2djr_A           28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMHRE   61 (76)
T ss_dssp             CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred             EEECCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence            457999999887       357999999875544

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=81.46  E-value=0.93  Score=20.88  Aligned_cols=22  Identities=18%  Similarity=0.539  Sum_probs=19.5

Q ss_pred             eecCcccccCCChhHHHHHHHh
Q 041414           29 FECKTCNRQFPSFQALGGHRAS   50 (152)
Q Consensus        29 ~~C~~C~k~f~~~~~L~~h~~~   50 (152)
                      -.|..|.+.|+...+|..|++-
T Consensus        10 qhcrfckkkysdvknlikhire   31 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRD   31 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            4589999999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	152
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	4e-12
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	6e-11

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 55.1 bits (133), Expect = 4e-12
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 27 RAFECKTCNRQFPSFQALGGHRASHKKSR 55
          R++ C  C R+F S QALGGH   H++ R
Sbjct: 4  RSYTCSFCKREFRSAQALGGHMNVHRRDR 32

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 52.0 bits (125), Expect = 6e-11
 Identities = 15/27 (55%), Positives = 18/27 (66%)

Query: 73 PKTHECSVCGLEFAIGQALGGHMRRHR 99
          P+++ CS C  EF   QALGGHM  HR
Sbjct: 3  PRSYTCSFCKREFRSAQALGGHMNVHR 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	152
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.77
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.59
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.57
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.56
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.52
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.5
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.49
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.49
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.48
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.47
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.44
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.42
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.4
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.4
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.39
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.39
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.37
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.36
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.36
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.3
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.29
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.27
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.26
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.25
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.25
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.17
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.16
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.16
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.09
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.05
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.03
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.0
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.0
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.98
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.96
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.95
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.88
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.87
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.84
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.8
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.76
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.75
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.64
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.63
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.58
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.58
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.52
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.51
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.5
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.43
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.36
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.09
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.08
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.08
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.06
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.03
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.03
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.99
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.98
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.91
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.9
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.87
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.85
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.85
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.83
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.81
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.79
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.74
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.68
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.64
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.63
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.62
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.57
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.5
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.47
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.43
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.38
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.36
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.33
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.33
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.24
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.18
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.1
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.91
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.73
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.62
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.57
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.55
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.46
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.43
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.37
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.18
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.04
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.04
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.01
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.64
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.6
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.23
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.11
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.09
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.91
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.82
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.0
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.94
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.89
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.52
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.5
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.32
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.12
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.77
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.34
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	87.94
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	87.27
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	85.05
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	84.9
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	83.99
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	82.15

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.4e-19  Score=97.31  Aligned_cols=53  Identities=30%  Similarity=0.681  Sum_probs=50.2

Q ss_pred             CcceecCcccccCCChhHHHHHHHhcCCCCCCCCCCCCcccccccCCCCceeccccccccccchHHHHHHhhc
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRASHKKSRVTEGSGGGVDTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRH   98 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~~c~~~~~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h   98 (152)
                      ||||.|+ ||++|....+|..|+++|++                   ++||.|.+||++|...+.|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~-------------------ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLG-------------------LRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSC-------------------CCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhcccc-------------------ccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            7899995 99999999999999999987                   78999999999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.7e-16  Score=77.80  Aligned_cols=37  Identities=22%  Similarity=0.452  Sum_probs=35.3

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHHhhccCC
Q 041414           65 DTQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        65 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      +|+++|+++|||+|.+|||+|...++|.+|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5889999999999999999999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=6e-16  Score=76.55  Aligned_cols=37  Identities=22%  Similarity=0.480  Sum_probs=35.6

Q ss_pred             ccccccCCCcceecCcccccCCChhHHHHHHHhcCCC
Q 041414           18 NGVNMAVADRAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        18 ~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      +|+++|++++||.|++||++|...++|..|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            7999999999999999999999999999999999985

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1e-15  Score=72.79  Aligned_cols=33  Identities=27%  Similarity=0.383  Sum_probs=31.6

Q ss_pred             ccCCCCceeccccccccccchHHHHHHhhccCC
Q 041414           69 SPVKPKTHECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        69 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      +|+|+|||+|.+||++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            588999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=3.2e-15  Score=71.07  Aligned_cols=33  Identities=18%  Similarity=0.505  Sum_probs=31.7

Q ss_pred             ccCCCcceecCcccccCCChhHHHHHHHhcCCC
Q 041414           22 MAVADRAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        22 ~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      ||+||+||.|.+||++|...++|..|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            699999999999999999999999999999984

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=6.7e-15  Score=71.71  Aligned_cols=35  Identities=26%  Similarity=0.375  Sum_probs=32.5

Q ss_pred             cccCCCCceeccccccccccchHHHHHHhhccCCC
Q 041414           68 QSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        68 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      ++|+|||||+|.+||++|...+.|..|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            57899999999999999999999999999998763

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=4.9e-16  Score=83.11  Aligned_cols=47  Identities=26%  Similarity=0.494  Sum_probs=44.9

Q ss_pred             chhcccCCCCCCCccccccccCCCcceecCcccccCCChhHHHHHHHhc
Q 041414            3 NCLMFMPHGGDFDAVNGVNMAVADRAFECKTCNRQFPSFQALGGHRASH   51 (152)
Q Consensus         3 ~C~~~~~~~~~~~~~~h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h   51 (152)
                      .||+.|.....|.  .|+++|+|++||.|++||++|...+.|..|+++|
T Consensus         7 ~Cgk~F~~~~~l~--~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           7 QCGKSFTHKSQRD--RHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             TTSCEESSHHHHH--HHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCCeECCHHHhH--HHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            3999999999999  9999999999999999999999999999999887

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.49  E-value=7.7e-15  Score=71.98  Aligned_cols=35  Identities=23%  Similarity=0.427  Sum_probs=33.2

Q ss_pred             cccccCCCCceeccccccccccchHHHHHHhhccC
Q 041414           66 TQQSPVKPKTHECSVCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        66 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~  100 (152)
                      |.++|+|||||+|.+||++|.+.++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            78899999999999999999999999999999974

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.48  E-value=1.1e-14  Score=71.42  Aligned_cols=35  Identities=26%  Similarity=0.509  Sum_probs=33.2

Q ss_pred             cccccCCCcceecCcccccCCChhHHHHHHHhcCC
Q 041414           19 GVNMAVADRAFECKTCNRQFPSFQALGGHRASHKK   53 (152)
Q Consensus        19 h~~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~   53 (152)
                      |.++|+||+||.|++|+++|..+++|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            77999999999999999999999999999999864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.4e-14  Score=70.54  Aligned_cols=34  Identities=18%  Similarity=0.437  Sum_probs=32.2

Q ss_pred             cccCCCcceecCcccccCCChhHHHHHHHhcCCC
Q 041414           21 NMAVADRAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      ++|+||+||.|.+||++|...++|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5899999999999999999999999999999874

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=3.3e-14  Score=68.38  Aligned_cols=32  Identities=16%  Similarity=0.368  Sum_probs=30.5

Q ss_pred             cCCCCceeccccccccccchHHHHHHhhccCC
Q 041414           70 PVKPKTHECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        70 h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      |+|||||+|.+|++.|.+.++|.+|+++|+.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999999875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=7.4e-14  Score=68.82  Aligned_cols=37  Identities=22%  Similarity=0.522  Sum_probs=31.5

Q ss_pred             CCCcceecCcccccCCChhHHHHHHH-hcCCCCCCCCC
Q 041414           24 VADRAFECKTCNRQFPSFQALGGHRA-SHKKSRVTEGS   60 (152)
Q Consensus        24 ~~e~~~~C~~C~k~f~~~~~L~~h~~-~h~~~~~~~c~   60 (152)
                      +-+|||.|.+||++|...++|.+|++ +|++++||.|+
T Consensus         1 s~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            35799999999999999999999975 79887666554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.40  E-value=4.5e-14  Score=64.41  Aligned_cols=28  Identities=29%  Similarity=0.632  Sum_probs=27.0

Q ss_pred             CCceeccccccccccchHHHHHHhhccC
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~  100 (152)
                      ||||+|++||++|.+.++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999987

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=9.9e-14  Score=67.37  Aligned_cols=34  Identities=18%  Similarity=0.381  Sum_probs=30.0

Q ss_pred             cccCCCCceeccccccccccchHHHHHHhhccCC
Q 041414           68 QSPVKPKTHECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        68 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      ++|+|||||+|++||++|.+.++|.+|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            5789999999999999999999999998765443

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.39  E-value=9.7e-14  Score=66.70  Aligned_cols=32  Identities=22%  Similarity=0.482  Sum_probs=30.5

Q ss_pred             cCCCcceecCcccccCCChhHHHHHHHhcCCC
Q 041414           23 AVADRAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        23 h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      |+||+||.|++|++.|..+++|.+|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            79999999999999999999999999999874

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.39  E-value=7.7e-14  Score=64.36  Aligned_cols=29  Identities=31%  Similarity=0.563  Sum_probs=27.8

Q ss_pred             CceeccccccccccchHHHHHHhhccCCC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      |||.|++||++|.+.+.|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999985

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.2e-13  Score=63.57  Aligned_cols=29  Identities=24%  Similarity=0.527  Sum_probs=27.7

Q ss_pred             CceeccccccccccchHHHHHHhhccCCC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      |||.|++||++|.+.++|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999985

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=2.1e-13  Score=66.19  Aligned_cols=33  Identities=15%  Similarity=0.419  Sum_probs=29.6

Q ss_pred             cccCCCcceecCcccccCCChhHHHHHHHhcCC
Q 041414           21 NMAVADRAFECKTCNRQFPSFQALGGHRASHKK   53 (152)
Q Consensus        21 ~~h~~e~~~~C~~C~k~f~~~~~L~~h~~~h~~   53 (152)
                      ++|+||+||.|++|++.|..+++|..|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            589999999999999999999999999865443

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=2.1e-13  Score=67.12  Aligned_cols=35  Identities=29%  Similarity=0.525  Sum_probs=32.1

Q ss_pred             CCCceeccccccccccchHHHHHHh-hccCCCcccc
Q 041414           72 KPKTHECSVCGLEFAIGQALGGHMR-RHRAGASHAN  106 (152)
Q Consensus        72 ~~k~~~C~~C~k~F~~~~~L~~H~~-~h~~~~~~~~  106 (152)
                      .+|||+|.+||++|...++|.+|++ +|+|++||..
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCC
Confidence            4799999999999999999999986 7999999863

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.30  E-value=4.6e-13  Score=60.97  Aligned_cols=28  Identities=29%  Similarity=0.675  Sum_probs=26.9

Q ss_pred             CcceecCcccccCCChhHHHHHHHhcCC
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRASHKK   53 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~h~~   53 (152)
                      ||||.|++|+++|..+++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            7999999999999999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.29  E-value=5.3e-13  Score=68.60  Aligned_cols=41  Identities=29%  Similarity=0.589  Sum_probs=36.1

Q ss_pred             CCCCccccccccCCCcceecCc--ccccCCChhHHHHHHHhcCCCC
Q 041414           12 GDFDAVNGVNMAVADRAFECKT--CNRQFPSFQALGGHRASHKKSR   55 (152)
Q Consensus        12 ~~~~~~~h~~~h~~e~~~~C~~--C~k~f~~~~~L~~h~~~h~~~~   55 (152)
                      +.+.  .|+ .|++|+||.|.+  |++.|...++|..|+++|+|++
T Consensus         5 ~~l~--~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSID--KYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGG--GSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhc--chh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3444  777 499999999988  9999999999999999999864

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.27  E-value=1.3e-12  Score=60.08  Aligned_cols=29  Identities=34%  Similarity=0.724  Sum_probs=27.5

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCCC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKSR   55 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~~   55 (152)
                      +||.|++|+++|...+.|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999874

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=8e-13  Score=58.72  Aligned_cols=26  Identities=35%  Similarity=0.591  Sum_probs=24.9

Q ss_pred             CceeccccccccccchHHHHHHhhcc
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~   99 (152)
                      |||+|.+|||+|...+.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999985

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.25  E-value=8.2e-13  Score=67.88  Aligned_cols=34  Identities=24%  Similarity=0.426  Sum_probs=31.6

Q ss_pred             ccCCCCceeccc--cccccccchHHHHHHhhccCCC
Q 041414           69 SPVKPKTHECSV--CGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        69 ~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      .|++++||.|.+  |+++|...++|.+|+++|+|++
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            378899999987  9999999999999999999985

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.9e-12  Score=59.50  Aligned_cols=29  Identities=24%  Similarity=0.640  Sum_probs=27.4

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCCC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKSR   55 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~~   55 (152)
                      |||.|++||++|..+++|.+|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            69999999999999999999999999864

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=5.7e-12  Score=58.20  Aligned_cols=28  Identities=29%  Similarity=0.638  Sum_probs=26.7

Q ss_pred             Cceeccc--cccccccchHHHHHHhhccCC
Q 041414           74 KTHECSV--CGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        74 k~~~C~~--C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      |||.|++  ||++|.+.++|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899988  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=5.4e-12  Score=58.38  Aligned_cols=28  Identities=32%  Similarity=0.723  Sum_probs=26.5

Q ss_pred             Cceeccc--cccccccchHHHHHHhhccCC
Q 041414           74 KTHECSV--CGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        74 k~~~C~~--C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      |||.|++  ||++|...++|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999987  999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=5.3e-12  Score=56.02  Aligned_cols=26  Identities=23%  Similarity=0.632  Sum_probs=24.8

Q ss_pred             cceecCcccccCCChhHHHHHHHhcC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      |||+|++|||+|...++|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999984

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2.2e-11  Score=56.74  Aligned_cols=29  Identities=28%  Similarity=0.595  Sum_probs=26.7

Q ss_pred             Cceecc--ccccccccchHHHHHHhhccCCC
Q 041414           74 KTHECS--VCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        74 k~~~C~--~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      |||.|+  .||++|.+.++|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            689996  59999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=5.2e-11  Score=57.39  Aligned_cols=32  Identities=25%  Similarity=0.427  Sum_probs=28.1

Q ss_pred             eecCc--ccccCCChhHHHHHHHhcCCCCCCCCC
Q 041414           29 FECKT--CNRQFPSFQALGGHRASHKKSRVTEGS   60 (152)
Q Consensus        29 ~~C~~--C~k~f~~~~~L~~h~~~h~~~~~~~c~   60 (152)
                      |.|++  |+++|...++|.+|+++|++++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            78877  999999999999999999997776654

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=7.9e-11  Score=54.25  Aligned_cols=28  Identities=21%  Similarity=0.587  Sum_probs=26.5

Q ss_pred             cceecCc--ccccCCChhHHHHHHHhcCCC
Q 041414           27 RAFECKT--CNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        27 ~~~~C~~--C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      |||.|++  |+++|..+++|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6999999  999999999999999999985

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.00  E-value=1.1e-10  Score=54.56  Aligned_cols=29  Identities=21%  Similarity=0.433  Sum_probs=27.0

Q ss_pred             CCceeccc--cccccccchHHHHHHhhccCC
Q 041414           73 PKTHECSV--CGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        73 ~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      ||||.|.+  ||++|.+.++|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999988  999999999999999999864

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=8e-11  Score=54.32  Aligned_cols=28  Identities=25%  Similarity=0.526  Sum_probs=26.3

Q ss_pred             cceecCc--ccccCCChhHHHHHHHhcCCC
Q 041414           27 RAFECKT--CNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        27 ~~~~C~~--C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      |||.|++  |+++|...++|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999988  999999999999999999985

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=7.7e-11  Score=53.82  Aligned_cols=27  Identities=30%  Similarity=0.621  Sum_probs=25.5

Q ss_pred             Cceeccc--cccccccchHHHHHHhhccC
Q 041414           74 KTHECSV--CGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        74 k~~~C~~--C~k~F~~~~~L~~H~~~h~~  100 (152)
                      |||.|.+  ||++|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899988  99999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.8e-10  Score=53.53  Aligned_cols=29  Identities=28%  Similarity=0.693  Sum_probs=26.4

Q ss_pred             cceecC--cccccCCChhHHHHHHHhcCCCC
Q 041414           27 RAFECK--TCNRQFPSFQALGGHRASHKKSR   55 (152)
Q Consensus        27 ~~~~C~--~C~k~f~~~~~L~~h~~~h~~~~   55 (152)
                      +||.|+  .|+++|...++|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            689996  59999999999999999999864

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.9e-10  Score=55.33  Aligned_cols=32  Identities=25%  Similarity=0.496  Sum_probs=29.0

Q ss_pred             ceeccc--cccccccchHHHHHHhhccCCCcccc
Q 041414           75 THECSV--CGLEFAIGQALGGHMRRHRAGASHAN  106 (152)
Q Consensus        75 ~~~C~~--C~k~F~~~~~L~~H~~~h~~~~~~~~  106 (152)
                      .|.|+.  ||++|.+...|++|+++|+|++||..
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             CeECCCCCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            378876  99999999999999999999999863

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.88  E-value=6.4e-10  Score=51.88  Aligned_cols=29  Identities=31%  Similarity=0.730  Sum_probs=26.9

Q ss_pred             CcceecCc--ccccCCChhHHHHHHHhcCCC
Q 041414           26 DRAFECKT--CNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        26 e~~~~C~~--C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      |+||.|++  |+++|...++|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999988  999999999999999999863

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=2.6e-10  Score=51.47  Aligned_cols=26  Identities=27%  Similarity=0.566  Sum_probs=24.4

Q ss_pred             Cceeccc--cccccccchHHHHHHhhcc
Q 041414           74 KTHECSV--CGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        74 k~~~C~~--C~k~F~~~~~L~~H~~~h~   99 (152)
                      |||.|++  |||+|.+.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899988  9999999999999999985

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=8e-10  Score=46.64  Aligned_cols=26  Identities=42%  Similarity=0.787  Sum_probs=24.5

Q ss_pred             ceeccccccccccchHHHHHHhhccC
Q 041414           75 THECSVCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~h~~  100 (152)
                      |++|..|++.|+++..|+.||+.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67999999999999999999999986

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=6.7e-10  Score=50.61  Aligned_cols=27  Identities=30%  Similarity=0.653  Sum_probs=25.3

Q ss_pred             cceecCc--ccccCCChhHHHHHHHhcCC
Q 041414           27 RAFECKT--CNRQFPSFQALGGHRASHKK   53 (152)
Q Consensus        27 ~~~~C~~--C~k~f~~~~~L~~h~~~h~~   53 (152)
                      |||.|++  |+++|...++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6999988  99999999999999999976

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.76  E-value=2.5e-09  Score=46.58  Aligned_cols=27  Identities=30%  Similarity=0.598  Sum_probs=25.7

Q ss_pred             CCceeccccccccccchHHHHHHhhcc
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~   99 (152)
                      ||||.|.+||+.|.+....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999985

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=1.5e-09  Score=48.91  Aligned_cols=26  Identities=31%  Similarity=0.687  Sum_probs=24.4

Q ss_pred             cceecCc--ccccCCChhHHHHHHHhcC
Q 041414           27 RAFECKT--CNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        27 ~~~~C~~--C~k~f~~~~~L~~h~~~h~   52 (152)
                      +||.|++  |||+|...++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6999988  9999999999999999985

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=1e-08  Score=46.30  Aligned_cols=33  Identities=24%  Similarity=0.357  Sum_probs=30.1

Q ss_pred             CCceeccccccccccchHHHHHHhhccCCCccc
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHRAGASHA  105 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~~~  105 (152)
                      .+...|.+||+.|.....|++|...|.+++||.
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            356789999999999999999999999999974

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=8.9e-09  Score=43.36  Aligned_cols=26  Identities=23%  Similarity=0.530  Sum_probs=24.2

Q ss_pred             ceecCcccccCCChhHHHHHHHhcCC
Q 041414           28 AFECKTCNRQFPSFQALGGHRASHKK   53 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h~~   53 (152)
                      |++|++|++.|+.+..|+.|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67899999999999999999999975

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.6e-08  Score=43.43  Aligned_cols=27  Identities=30%  Similarity=0.539  Sum_probs=25.0

Q ss_pred             ceeccccccccccchHHHHHHhhccCC
Q 041414           75 THECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      .+.|.+||++|...+.|++|+.+|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            468999999999999999999999985

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.58  E-value=1.9e-08  Score=43.69  Aligned_cols=27  Identities=26%  Similarity=0.625  Sum_probs=25.3

Q ss_pred             CcceecCcccccCCChhHHHHHHHhcC
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      |+||.|++||+.|..+...++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999885

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=2.2e-08  Score=45.18  Aligned_cols=31  Identities=23%  Similarity=0.527  Sum_probs=28.0

Q ss_pred             cceecCcccccCCChhHHHHHHHhcCCCCCC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHKKSRVT   57 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~~~~~~   57 (152)
                      +...|++||+.|.....|.+|...|++++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4578999999999999999999999998776

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=3.5e-08  Score=42.57  Aligned_cols=29  Identities=21%  Similarity=0.479  Sum_probs=27.0

Q ss_pred             CCceeccccccccccchHHHHHHhhccCC
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      ++||+|+.|..+-...+.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999984

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=3.4e-08  Score=43.54  Aligned_cols=29  Identities=24%  Similarity=0.560  Sum_probs=27.1

Q ss_pred             CcceecCcccccCCChhHHHHHHHhcCCC
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      |+||.|++|+..|..+..+..|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999999874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=5.6e-08  Score=42.83  Aligned_cols=29  Identities=34%  Similarity=0.689  Sum_probs=27.3

Q ss_pred             CCceeccccccccccchHHHHHHhhccCC
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      ||||.|++|+..|.++.-+..|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999999875

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=1.1e-07  Score=40.76  Aligned_cols=27  Identities=22%  Similarity=0.474  Sum_probs=24.5

Q ss_pred             ceecCcccccCCChhHHHHHHHhcCCC
Q 041414           28 AFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      .+.|.+|||+|...+.|++|+.+|+++
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            467999999999999999999999874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.09  E-value=8.1e-07  Score=36.87  Aligned_cols=24  Identities=33%  Similarity=0.654  Sum_probs=22.5

Q ss_pred             eeccccccccccchHHHHHHhhcc
Q 041414           76 HECSVCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        76 ~~C~~C~k~F~~~~~L~~H~~~h~   99 (152)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999985

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.08  E-value=1.4e-06  Score=41.10  Aligned_cols=31  Identities=48%  Similarity=0.879  Sum_probs=27.7

Q ss_pred             CCceeccccccccccchHHHHHHhhccCCCc
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHRAGAS  103 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~~  103 (152)
                      .+.|+|.+|++.|.+..+|--||+.|..++.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            4679999999999999999999999987653

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=1e-06  Score=37.11  Aligned_cols=26  Identities=31%  Similarity=0.509  Sum_probs=24.5

Q ss_pred             eccccccccccchHHHHHHhhccCCC
Q 041414           77 ECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        77 ~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      +|+.|.+.|.++..|+.|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999984

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.3e-06  Score=38.33  Aligned_cols=27  Identities=19%  Similarity=0.421  Sum_probs=24.2

Q ss_pred             Cceeccc--cccccccchHHHHHHhhccC
Q 041414           74 KTHECSV--CGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        74 k~~~C~~--C~k~F~~~~~L~~H~~~h~~  100 (152)
                      |||.|.+  |++++...++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899987  99999999999999998664

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.7e-06  Score=37.19  Aligned_cols=28  Identities=29%  Similarity=0.492  Sum_probs=26.3

Q ss_pred             CcceecCcccccCCChhHHHHHHHhcCC
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRASHKK   53 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~h~~   53 (152)
                      |+||+|..|...-..++.|..|.+.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            6899999999999999999999999987

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=2.7e-06  Score=36.71  Aligned_cols=27  Identities=22%  Similarity=0.439  Sum_probs=25.1

Q ss_pred             eecCcccccCCChhHHHHHHHhcCCCC
Q 041414           29 FECKTCNRQFPSFQALGGHRASHKKSR   55 (152)
Q Consensus        29 ~~C~~C~k~f~~~~~L~~h~~~h~~~~   55 (152)
                      |.|+.||.....++.|+.|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999864

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=2.5e-06  Score=37.44  Aligned_cols=27  Identities=19%  Similarity=0.538  Sum_probs=24.1

Q ss_pred             cceecCc--ccccCCChhHHHHHHHhcCC
Q 041414           27 RAFECKT--CNRQFPSFQALGGHRASHKK   53 (152)
Q Consensus        27 ~~~~C~~--C~k~f~~~~~L~~h~~~h~~   53 (152)
                      +||.|.+  |+++|...++|..|+++++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899987  99999999999999997654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.98  E-value=2.8e-06  Score=40.02  Aligned_cols=30  Identities=47%  Similarity=0.956  Sum_probs=26.8

Q ss_pred             CcceecCcccccCCChhHHHHHHHhcCCCC
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRASHKKSR   55 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~h~~~~   55 (152)
                      .+.|.|.+|++.|.+...|..||+.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            467999999999999999999999997654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=3.9e-06  Score=35.71  Aligned_cols=26  Identities=31%  Similarity=0.561  Sum_probs=24.7

Q ss_pred             CceeccccccccccchHHHHHHhhcc
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~   99 (152)
                      |||+|..|..+-...+.|+.|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999985

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.90  E-value=3.5e-06  Score=36.43  Aligned_cols=28  Identities=25%  Similarity=0.377  Sum_probs=25.2

Q ss_pred             Cceeccc--cccccccchHHHHHHhhccCC
Q 041414           74 KTHECSV--CGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        74 k~~~C~~--C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      +||.|.+  |.|.|.+...|.+|.-+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5788876  999999999999999999985

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=4e-06  Score=39.75  Aligned_cols=26  Identities=23%  Similarity=0.505  Sum_probs=23.5

Q ss_pred             CCCCceeccccccccccchHHHHHHh
Q 041414           71 VKPKTHECSVCGLEFAIGQALGGHMR   96 (152)
Q Consensus        71 ~~~k~~~C~~C~k~F~~~~~L~~H~~   96 (152)
                      +|.|||+|..|+|.|.....+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46799999999999999999999964

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.85  E-value=7.4e-06  Score=34.43  Aligned_cols=26  Identities=35%  Similarity=0.602  Sum_probs=24.0

Q ss_pred             ecCcccccCCChhHHHHHHHhcCCCC
Q 041414           30 ECKTCNRQFPSFQALGGHRASHKKSR   55 (152)
Q Consensus        30 ~C~~C~k~f~~~~~L~~h~~~h~~~~   55 (152)
                      .|+.|.+.|.++..|+.|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            59999999999999999999999864

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=5.7e-06  Score=35.65  Aligned_cols=27  Identities=26%  Similarity=0.442  Sum_probs=25.1

Q ss_pred             eeccccccccccchHHHHHHhhccCCC
Q 041414           76 HECSVCGLEFAIGQALGGHMRRHRAGA  102 (152)
Q Consensus        76 ~~C~~C~k~F~~~~~L~~H~~~h~~~~  102 (152)
                      |.|++||..-...+-|..|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999873

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.83  E-value=5.9e-06  Score=34.19  Aligned_cols=24  Identities=38%  Similarity=0.776  Sum_probs=22.3

Q ss_pred             eecCcccccCCChhHHHHHHHhcC
Q 041414           29 FECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        29 ~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999884

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.81  E-value=6.2e-06  Score=35.45  Aligned_cols=26  Identities=27%  Similarity=0.515  Sum_probs=23.1

Q ss_pred             Cceeccc--cccccccchHHHHHHhhcc
Q 041414           74 KTHECSV--CGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        74 k~~~C~~--C~k~F~~~~~L~~H~~~h~   99 (152)
                      .||+|+.  |++.|...+.|++|.++|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            4899975  9999999999999999873

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=9.1e-06  Score=34.97  Aligned_cols=29  Identities=31%  Similarity=0.457  Sum_probs=26.8

Q ss_pred             CCceeccccccccccchHHHHHHhhccCC
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      +.-|.|..|...|.+.-.|+.||-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56799999999999999999999999985

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=5.8e-06  Score=36.56  Aligned_cols=28  Identities=25%  Similarity=0.426  Sum_probs=24.4

Q ss_pred             Cceeccc--cccccccchHHHHHH-hhccCC
Q 041414           74 KTHECSV--CGLEFAIGQALGGHM-RRHRAG  101 (152)
Q Consensus        74 k~~~C~~--C~k~F~~~~~L~~H~-~~h~~~  101 (152)
                      |||.|+.  |.|+|...+....|+ ++|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6899988  999999999999997 888653

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.8e-05  Score=33.61  Aligned_cols=26  Identities=27%  Similarity=0.590  Sum_probs=24.5

Q ss_pred             cceecCcccccCCChhHHHHHHHhcC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      +||+|..|..+-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999985

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.64  E-value=1.5e-05  Score=35.17  Aligned_cols=27  Identities=22%  Similarity=0.424  Sum_probs=23.7

Q ss_pred             ceeccccccccccchHHHHHHh-hccCC
Q 041414           75 THECSVCGLEFAIGQALGGHMR-RHRAG  101 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~-~h~~~  101 (152)
                      ||.|.+|++.|.+..-|-+|.+ .|.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            7999999999999999999975 57664

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.63  E-value=1.9e-05  Score=33.90  Aligned_cols=25  Identities=28%  Similarity=0.658  Sum_probs=22.7

Q ss_pred             cceecCc--ccccCCChhHHHHHHHhc
Q 041414           27 RAFECKT--CNRQFPSFQALGGHRASH   51 (152)
Q Consensus        27 ~~~~C~~--C~k~f~~~~~L~~h~~~h   51 (152)
                      .||.|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5899975  999999999999999887

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.9e-05  Score=33.97  Aligned_cols=24  Identities=25%  Similarity=0.599  Sum_probs=22.2

Q ss_pred             ceeccccccccccchHHHHHHhhc
Q 041414           75 THECSVCGLEFAIGQALGGHMRRH   98 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~h   98 (152)
                      ||.|..|+.+|..+.+|..||+.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999853

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=3.1e-05  Score=33.47  Aligned_cols=27  Identities=30%  Similarity=0.534  Sum_probs=23.5

Q ss_pred             CceeccccccccccchHHHHHHhh-ccC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRR-HRA  100 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~-h~~  100 (152)
                      +||.|+.|...-...++|+.|.++ |..
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            689999999888999999999987 443

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=3.5e-05  Score=36.47  Aligned_cols=26  Identities=19%  Similarity=0.511  Sum_probs=23.2

Q ss_pred             CCCcceecCcccccCCChhHHHHHHH
Q 041414           24 VADRAFECKTCNRQFPSFQALGGHRA   49 (152)
Q Consensus        24 ~~e~~~~C~~C~k~f~~~~~L~~h~~   49 (152)
                      +|-+||+|.+|+|.|....++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46799999999999999999998864

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.47  E-value=5.8e-05  Score=32.38  Aligned_cols=29  Identities=28%  Similarity=0.547  Sum_probs=26.4

Q ss_pred             CcceecCcccccCCChhHHHHHHHhcCCC
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      |.-|.|.+|...|...-.|..||-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56799999999999999999999999874

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=2.7e-05  Score=34.36  Aligned_cols=27  Identities=19%  Similarity=0.640  Sum_probs=23.3

Q ss_pred             cceecCc--ccccCCChhHHHHHH-HhcCC
Q 041414           27 RAFECKT--CNRQFPSFQALGGHR-ASHKK   53 (152)
Q Consensus        27 ~~~~C~~--C~k~f~~~~~L~~h~-~~h~~   53 (152)
                      +||.|..  |.|+|+..+.-..|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            6899987  999999999988997 77764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.38  E-value=4.8e-05  Score=32.76  Aligned_cols=28  Identities=32%  Similarity=0.751  Sum_probs=24.5

Q ss_pred             cceecCc--ccccCCChhHHHHHHHhcCCC
Q 041414           27 RAFECKT--CNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        27 ~~~~C~~--C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      +||.|.+  |.|.|.+-..|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5888865  999999999999999999874

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=0.00011  Score=31.66  Aligned_cols=26  Identities=15%  Similarity=0.446  Sum_probs=23.2

Q ss_pred             cceecCcccccCCChhHHHHHHHhcC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      +||.|..|.......++|+.|+++-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            69999999999999999999998743

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=7.2e-05  Score=34.83  Aligned_cols=28  Identities=29%  Similarity=0.540  Sum_probs=24.8

Q ss_pred             CCCceec--cccccccccchHHHHHHhhcc
Q 041414           72 KPKTHEC--SVCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        72 ~~k~~~C--~~C~k~F~~~~~L~~H~~~h~   99 (152)
                      .+|||.|  +-|+..|.+...|..|.+.|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            3799999  559999999999999998875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=5.9e-05  Score=32.41  Aligned_cols=24  Identities=29%  Similarity=0.551  Sum_probs=22.2

Q ss_pred             ceecCcccccCCChhHHHHHHHhc
Q 041414           28 AFECKTCNRQFPSFQALGGHRASH   51 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h   51 (152)
                      ||.|..|+.+|..+.+|..||+.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999853

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=9.7e-05  Score=31.81  Aligned_cols=27  Identities=19%  Similarity=0.563  Sum_probs=23.3

Q ss_pred             CceeccccccccccchHHHHHHhhccC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~  100 (152)
                      +||+|..|..--.+.++|..|++.-+|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            589999999888899999999986444

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00015  Score=33.77  Aligned_cols=29  Identities=28%  Similarity=0.643  Sum_probs=25.3

Q ss_pred             CCCcceec--CcccccCCChhHHHHHHHhcC
Q 041414           24 VADRAFEC--KTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        24 ~~e~~~~C--~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      .++|||.|  +-|+..|.....|..|...|.
T Consensus         2 ~ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCceecCCCCccccccchHHHHHhhhhhe
Confidence            36899999  569999999999999988774

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.10  E-value=0.00014  Score=29.97  Aligned_cols=22  Identities=32%  Similarity=0.600  Sum_probs=20.6

Q ss_pred             ceeccccccccccchHHHHHHh
Q 041414           75 THECSVCGLEFAIGQALGGHMR   96 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~   96 (152)
                      ||+|..|...|..+..|..||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999984

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.91  E-value=0.00027  Score=31.06  Aligned_cols=26  Identities=31%  Similarity=0.590  Sum_probs=22.3

Q ss_pred             ceecCcccccCCChhHHHHHHHh-cCC
Q 041414           28 AFECKTCNRQFPSFQALGGHRAS-HKK   53 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~-h~~   53 (152)
                      ||.|.+|++.|....-|.+|++. |.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            79999999999999999999753 544

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.73  E-value=0.00038  Score=29.30  Aligned_cols=23  Identities=30%  Similarity=0.499  Sum_probs=20.4

Q ss_pred             ceeccccccccccchHHHHHHhh
Q 041414           75 THECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      ||+|..||+.+-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            79999999999999999988653

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.62  E-value=0.00063  Score=27.89  Aligned_cols=23  Identities=26%  Similarity=0.641  Sum_probs=21.0

Q ss_pred             cceecCcccccCCChhHHHHHHH
Q 041414           27 RAFECKTCNRQFPSFQALGGHRA   49 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~   49 (152)
                      .||+|..|...|..+..|..|+.
T Consensus         1 mpykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHH
Confidence            38999999999999999999975

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.00072  Score=28.99  Aligned_cols=25  Identities=24%  Similarity=0.460  Sum_probs=22.3

Q ss_pred             cceecCcccccCCChhHHHHHHHhc
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASH   51 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h   51 (152)
                      +||+|..|...-.+.++|..|++.-
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~   25 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKF   25 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHH
Confidence            5999999999999999999998753

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.55  E-value=0.00098  Score=27.98  Aligned_cols=22  Identities=32%  Similarity=0.620  Sum_probs=20.0

Q ss_pred             ceecCcccccCCChhHHHHHHH
Q 041414           28 AFECKTCNRQFPSFQALGGHRA   49 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~   49 (152)
                      ||+|..||+.|-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7899999999999999998864

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.0013  Score=27.77  Aligned_cols=26  Identities=31%  Similarity=0.442  Sum_probs=23.3

Q ss_pred             ceeccccccccccchHHHHHHhhccC
Q 041414           75 THECSVCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~h~~  100 (152)
                      |-+|++|..+-.++..|+.|.++|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            56899999999999999999999853

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.00069  Score=33.06  Aligned_cols=27  Identities=26%  Similarity=0.496  Sum_probs=24.0

Q ss_pred             CceeccccccccccchHHHHHHhhccC
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRRHRA  100 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~h~~  100 (152)
                      -.|.|..|||.|.....|++|...|-.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            358999999999999999999988764

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.0007  Score=30.69  Aligned_cols=23  Identities=35%  Similarity=0.221  Sum_probs=19.1

Q ss_pred             cccccccccchHHHHHHhhccCC
Q 041414           79 SVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        79 ~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      +.=++.|.....|..|+++|+||
T Consensus        11 ~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          11 SRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCcchhHHHHHHHHhhcCCC
Confidence            33456799999999999999986

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.18  E-value=0.0016  Score=26.71  Aligned_cols=22  Identities=23%  Similarity=0.484  Sum_probs=20.5

Q ss_pred             eeccccccccccchHHHHHHhh
Q 041414           76 HECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        76 ~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      |.|+.|-+.|.++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999875

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0023  Score=26.97  Aligned_cols=25  Identities=28%  Similarity=0.352  Sum_probs=22.6

Q ss_pred             ceecCcccccCCChhHHHHHHHhcC
Q 041414           28 AFECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      |-+|+.|..+.+++..|+.|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            6689999999999999999999884

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.04  E-value=0.0025  Score=26.14  Aligned_cols=22  Identities=18%  Similarity=0.520  Sum_probs=20.2

Q ss_pred             eecCcccccCCChhHHHHHHHh
Q 041414           29 FECKTCNRQFPSFQALGGHRAS   50 (152)
Q Consensus        29 ~~C~~C~k~f~~~~~L~~h~~~   50 (152)
                      |.|+.|-+.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999765

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.01  E-value=0.0024  Score=28.62  Aligned_cols=27  Identities=22%  Similarity=0.453  Sum_probs=23.6

Q ss_pred             ceeccccccccccchHHHHHHhhccCC
Q 041414           75 THECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      .|.|..|||.|.+...+.+|...-.|.
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            589999999999999999998776653

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.0038  Score=30.35  Aligned_cols=26  Identities=27%  Similarity=0.554  Sum_probs=22.8

Q ss_pred             cceecCcccccCCChhHHHHHHHhcC
Q 041414           27 RAFECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      --|.|-.|+|.|.....|+.|..-|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35789999999999999999988773

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.60  E-value=0.0032  Score=26.24  Aligned_cols=24  Identities=29%  Similarity=0.440  Sum_probs=19.9

Q ss_pred             eecc--ccccccccchHHHHHHhhcc
Q 041414           76 HECS--VCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        76 ~~C~--~C~k~F~~~~~L~~H~~~h~   99 (152)
                      |.|.  -|+++|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            4554  39999999999999998775

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.23  E-value=0.0086  Score=26.73  Aligned_cols=27  Identities=22%  Similarity=0.552  Sum_probs=23.5

Q ss_pred             ceecCcccccCCChhHHHHHHHhcCCC
Q 041414           28 AFECKTCNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      .|.|..|||.|.....+.+|-..-.|.
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            589999999999999999998776663

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.11  E-value=0.014  Score=24.76  Aligned_cols=25  Identities=24%  Similarity=0.598  Sum_probs=21.1

Q ss_pred             ceecCcccccCCChhHHHHHHHhcC
Q 041414           28 AFECKTCNRQFPSFQALGGHRASHK   52 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~~h~   52 (152)
                      -|.|..|||.+.+...++.|....+
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             ceechhHHHHHhhccCceEEEeecc
Confidence            4789999999999999999966533

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.09  E-value=0.0052  Score=27.70  Aligned_cols=21  Identities=24%  Similarity=0.115  Sum_probs=17.7

Q ss_pred             ccccCCChhHHHHHHHhcCCC
Q 041414           34 CNRQFPSFQALGGHRASHKKS   54 (152)
Q Consensus        34 C~k~f~~~~~L~~h~~~h~~~   54 (152)
                      =++.|.....|..|+++|+|+
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            356699999999999999884

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.91  E-value=0.0095  Score=25.77  Aligned_cols=28  Identities=29%  Similarity=0.585  Sum_probs=23.8

Q ss_pred             Cceeccc--cccccccchHHHHHHhhccCC
Q 041414           74 KTHECSV--CGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        74 k~~~C~~--C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      |.|.|..  |+..|...-.|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4577754  999999999999999999986

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.82  E-value=0.009  Score=25.02  Aligned_cols=23  Identities=30%  Similarity=0.609  Sum_probs=20.9

Q ss_pred             ceeccccccccccchHHHHHHhh
Q 041414           75 THECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      -|.|+.|+-...+++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            38899999999999999999974

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.00  E-value=0.015  Score=24.47  Aligned_cols=20  Identities=25%  Similarity=0.393  Sum_probs=18.0

Q ss_pred             ccccccccchHHHHHHhhcc
Q 041414           80 VCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        80 ~C~k~F~~~~~L~~H~~~h~   99 (152)
                      -|+|.|...+.++.|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            39999999999999998874

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.94  E-value=0.013  Score=25.81  Aligned_cols=23  Identities=26%  Similarity=0.572  Sum_probs=20.6

Q ss_pred             CceeccccccccccchHHHHHHh
Q 041414           74 KTHECSVCGLEFAIGQALGGHMR   96 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~   96 (152)
                      ..|.|.-||-.|.+.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            35899999999999999999975

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.89  E-value=0.016  Score=25.58  Aligned_cols=22  Identities=36%  Similarity=0.658  Sum_probs=19.9

Q ss_pred             ceecCcccccCCChhHHHHHHH
Q 041414           28 AFECKTCNRQFPSFQALGGHRA   49 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~   49 (152)
                      .|.|..||-.|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            5889999999999999999874

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.52  E-value=0.034  Score=26.78  Aligned_cols=28  Identities=14%  Similarity=0.358  Sum_probs=24.4

Q ss_pred             CCCceeccccccccccchHHHHHHhhcc
Q 041414           72 KPKTHECSVCGLEFAIGQALGGHMRRHR   99 (152)
Q Consensus        72 ~~k~~~C~~C~k~F~~~~~L~~H~~~h~   99 (152)
                      .+.|-.|+.|+....+..+|.+|+..-+
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            3679999999999999999999987633

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.50  E-value=0.03  Score=24.96  Aligned_cols=27  Identities=19%  Similarity=0.626  Sum_probs=23.4

Q ss_pred             CCcceecCcccccCCChhHHHHHHHhc
Q 041414           25 ADRAFECKTCNRQFPSFQALGGHRASH   51 (152)
Q Consensus        25 ~e~~~~C~~C~k~f~~~~~L~~h~~~h   51 (152)
                      |+..|.|.+|.+.|...+++-+|-.+.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtS   31 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTS   31 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhh
Confidence            566899999999999999999996653

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.32  E-value=0.045  Score=26.35  Aligned_cols=27  Identities=15%  Similarity=0.278  Sum_probs=24.1

Q ss_pred             CCCcceecCcccccCCChhHHHHHHHh
Q 041414           24 VADRAFECKTCNRQFPSFQALGGHRAS   50 (152)
Q Consensus        24 ~~e~~~~C~~C~k~f~~~~~L~~h~~~   50 (152)
                      ..+.|..|++|+....++.+|.+|...
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            467899999999999999999999764

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.12  E-value=0.012  Score=31.31  Aligned_cols=24  Identities=29%  Similarity=0.515  Sum_probs=21.5

Q ss_pred             CceeccccccccccchHHHHHHhh
Q 041414           74 KTHECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        74 k~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      -.|-|..|+|.|.+...|..|+++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            458999999999999999999864

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.77  E-value=0.041  Score=24.51  Aligned_cols=26  Identities=19%  Similarity=0.309  Sum_probs=23.1

Q ss_pred             CCCceeccccccccccchHHHHHHhh
Q 041414           72 KPKTHECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        72 ~~k~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      ++..|.|.+|.+.+...+++-+|.-+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            45679999999999999999999865

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.34  E-value=0.059  Score=22.79  Aligned_cols=23  Identities=17%  Similarity=0.359  Sum_probs=20.3

Q ss_pred             ceeccccccccccchHHHHHHhh
Q 041414           75 THECSVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        75 ~~~C~~C~k~F~~~~~L~~H~~~   97 (152)
                      .|.|..|||...+...++.|.-.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEee
Confidence            48899999999999999999654

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.94  E-value=0.058  Score=28.45  Aligned_cols=24  Identities=25%  Similarity=0.393  Sum_probs=21.1

Q ss_pred             CcceecCcccccCCChhHHHHHHH
Q 041414           26 DRAFECKTCNRQFPSFQALGGHRA   49 (152)
Q Consensus        26 e~~~~C~~C~k~f~~~~~L~~h~~   49 (152)
                      ...|-|..|++.|.+...|..|++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCEEecccccCccCCHHHHHHHHc
Confidence            445899999999999999999975

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.27  E-value=0.16  Score=22.81  Aligned_cols=24  Identities=25%  Similarity=0.520  Sum_probs=20.5

Q ss_pred             cceecCcccccCCChhHHHHHHHh
Q 041414           27 RAFECKTCNRQFPSFQALGGHRAS   50 (152)
Q Consensus        27 ~~~~C~~C~k~f~~~~~L~~h~~~   50 (152)
                      +...|-+|-+.|.+..++-+|+--
T Consensus         2 kkltclecmrtfkssfsiwrhqve   25 (41)
T d1wjpa3           2 KKLTCLECMRTFKSSFSIWRHQVE   25 (41)
T ss_dssp             GGGEEGGGTEECSSHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHHhhhe
Confidence            346799999999999999999764

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.05  E-value=0.41  Score=24.62  Aligned_cols=20  Identities=20%  Similarity=0.649  Sum_probs=15.3

Q ss_pred             ccCCCcceecCcccccCCCh
Q 041414           22 MAVADRAFECKTCNRQFPSF   41 (152)
Q Consensus        22 ~h~~e~~~~C~~C~k~f~~~   41 (152)
                      --+...-|.|+.|++.|..-
T Consensus         8 d~~~~~~y~Cp~C~~~ys~L   27 (62)
T d1vd4a_           8 DSTNRASFKCPVCSSTFTDL   27 (62)
T ss_dssp             SCCSSSEEECSSSCCEEEHH
T ss_pred             ccccCCceECCCCCCCcchh
Confidence            34556779999999999643

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.90  E-value=0.26  Score=20.64  Aligned_cols=19  Identities=32%  Similarity=0.415  Sum_probs=16.2

Q ss_pred             cccccccccchHHHHHHhh
Q 041414           79 SVCGLEFAIGQALGGHMRR   97 (152)
Q Consensus        79 ~~C~k~F~~~~~L~~H~~~   97 (152)
                      +.||+-|+....|+-|.+-
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            4699999999999988763

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.99  E-value=0.22  Score=25.68  Aligned_cols=29  Identities=21%  Similarity=0.411  Sum_probs=25.7

Q ss_pred             CCceeccccccccccchHHHHHHhhccCC
Q 041414           73 PKTHECSVCGLEFAIGQALGGHMRRHRAG  101 (152)
Q Consensus        73 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  101 (152)
                      ...|.|..|.-.|.+...|..|+..|..+
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hnee   44 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNEE   44 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccHH
Confidence            34699999999999999999999988765

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.15  E-value=0.42  Score=22.95  Aligned_cols=22  Identities=18%  Similarity=0.413  Sum_probs=19.3

Q ss_pred             ceecCcccccCCChhHHHHHHH
Q 041414           28 AFECKTCNRQFPSFQALGGHRA   49 (152)
Q Consensus        28 ~~~C~~C~k~f~~~~~L~~h~~   49 (152)
                      +-+|..|+..|+.+.++..|+-
T Consensus         6 ~~eC~lC~vKYs~~~SvrdHiF   27 (48)
T d2yrka1           6 KPECTLCGVKYSARLSIRDHIF   27 (48)
T ss_dssp             CSCCTTTTCCCCSSSCHHHHHT
T ss_pred             cccCcccceeeeeecchHhhhh
Confidence            4789999999999999998863