Citrus Sinensis ID: 041432


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-----
MKAPNVLDRLDPFHGGKKERERCLSTGRLAPFLLPCLCLTTILSLFLYFPNPFEAVSKREIQQKGAPIVKPPEGNAILNCNLYEGRWIQYRRDFNYKNSSCIPEARNCFLHGRTDRDFLNWRWKPYACNLPKFDPRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFILMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFFRQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRTFSPTHFEHGSWDTGGICNRTKPSDERQIIWVGEPWNIRKIQVEETERMGKEGKEQGKSFVAMDVTKAMLMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPIDTWNEFLMAILEIETGLVS
ccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHcccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHHcccEEEEEccccHHHHHHHHHHHcccccccEEEEccccccEEEEEEccccEEHHHHHHHHHHHHHHcccccccccEEEEcccccHHHHHccccccEEEEEccccccccccccccccEEEEEccccccEEEccHHHHHHHHHHHHHHHHHHccccccEEEEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccc
cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccHHHcccccccHcEEEEcccccccccccHHHHHHHHcccEEEEEcccHcHHHHHHHHHHHHHccccccEEEEccccEEEEEEccccEEEEEEEccEEEEccccccccccccEEEEEEccccHHHHHHcccccEEEEEccEEEEcccEEccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEcHHHHHHcccccccccccccccccccccEEccccccccHHHHHHHHHHHHcccccc
mkapnvldrldpfhggkkererclstgrlapfllpclclTTILSlflyfpnpfeavSKREiqqkgapivkppegnailncNLYEGRWIQYRRdfnyknsscipearncflhgrtdrdflnwrwkpyacnlpkfdprifldmvrgNKMAFIGDSVSMNQVESLVCLLskeevpkfvykdsaeqnriwhfpehdfILMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFFRQIYLykgdtvvgcvdceepnvtkvspsgAIQMALRTALVYINGCKECRGIVTVvrtfspthfehgswdtggicnrtkpsderqiiwvgepwnirKIQVEETERmgkegkeqgKSFVAMDVTKAMlmrpdghpgdywgnlrnkdfrdclhwclpgpidtWNEFLMAILEIETGLVS
mkapnvldrldpfhggkKERERCLSTGRLAPFLLPCLCLTTILSLFLYFPNPFEAVSKREIQQKgapivkppegnaILNCNLYEGRWIQYRRDFNYKNSSCIPEARNCFLHGRTDRDFLNWRWKPYACNLPKFDPRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFILMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFFRQIYLYKGDTVVGCVDCEEPnvtkvspsgaIQMALRTALVYINGCKECRGIVTVVRTFSpthfehgswdtggicnrTKPSDerqiiwvgepwnirkiQVEETermgkegkeqgksFVAMDVTKAMLMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPIDTWNEFLMAILEIETGLVS
MKAPNVLDRLDPFHGGKKERERCLSTGRLAPFLLPCLCLTTILSLFLYFPNPFEAVSKREIQQKGAPIVKPPEGNAILNCNLYEGRWIQYRRDFNYKNSSCIPEARNCFLHGRTDRDFLNWRWKPYACNLPKFDPRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFILMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFFRQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRTFSPTHFEHGSWDTGGICNRTKPSDERQIIWVGEPWNIRKIQVEETERMGKEGKEQGKSFVAMDVTKAMLMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPIDTWNEFLMAILEIETGLVS
*********************RCLSTGRLAPFLLPCLCLTTILSLFLYFPNPFEAVSKREIQ**GAPIVKPPEGNAILNCNLYEGRWIQYRRDFNYKNSSCIPEARNCFLHGRTDRDFLNWRWKPYACNLPKFDPRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFILMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFFRQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRTFSPTHFEHGSWDTGGICNRTKPSDERQIIWVGEPWNIRKIQV*****************VAMDVTKAMLMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPIDTWNEFLMAILEIETG***
**************************GRLAPFLLPCLCLTTILSLFLYFPN*****************************NLYEGRWIQYRRDFNYKNSSCIPEARNCFLHGRTDRDFLNWRWKPYACNLPKFDPRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFILMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFFRQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRTFSPTHFEHGSWDTGGICNRTKPSDERQIIWVGEPWNIRKIQVEETERMGKEGKEQGKSFVAMDVTKAMLMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPIDTWNEFLMAI**I******
MKAPNVLDRLDPFHGGKKERERCLSTGRLAPFLLPCLCLTTILSLFLYFPNPFEAVSKREIQQKGAPIVKPPEGNAILNCNLYEGRWIQYRRDFNYKNSSCIPEARNCFLHGRTDRDFLNWRWKPYACNLPKFDPRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFILMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFFRQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRTFSPTHFEHGSWDTGGICNRTKPSDERQIIWVGEPWNIRKIQVEET*********QGKSFVAMDVTKAMLMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPIDTWNEFLMAILEIETGLVS
**APNVLDRLDPFHGGKKERERCLSTGRLAPFLLPCLCLTTILSLFLYFPNPFEAV*********************LNCNLYEGRWIQYRRDFNYKNSSCIPEARNCFLHGRTDRDFLNWRWKPYACNLPKFDPRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFILMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFFRQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRTFSPTHFEHGSWDTGGICNRTKPSDERQIIWVGEPWNIRKIQVEETERMGKEGKEQGKSFVAMDVTKAMLMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPIDTWNEFLMAILEIE*****
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKAPNVLDRLDPFHGGKKERERCLSTGRLAPFLLPCLCLTTILSLFLYFPNPFEAVSKREIQQKGAPIVKPPEGNAILNCNLYEGRWIQYRRDFNYKNSSCIPEARNCFLHGRTDRDFLNWRWKPYACNLPKFDPRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFILMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFFRQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRTFSPTHFEHGSWDTGGICNRTKPSDERQIIWVGEPWNIRKIQVEETERMGKEGKEQGKSFVAMDVTKAMLMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPIDTWNEFLMAILEIETGLVS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query425
255552672418 conserved hypothetical protein [Ricinus 0.929 0.944 0.543 1e-128
224141311414 predicted protein [Populus trichocarpa] 0.957 0.983 0.530 1e-121
296087706419 unnamed protein product [Vitis vinifera] 0.948 0.961 0.496 1e-116
225452538419 PREDICTED: uncharacterized protein LOC10 0.948 0.961 0.491 1e-115
356550921446 PREDICTED: uncharacterized protein LOC10 0.962 0.917 0.479 1e-115
449459418432 PREDICTED: uncharacterized protein LOC10 0.96 0.944 0.468 1e-111
297818414415 predicted protein [Arabidopsis lyrata su 0.924 0.946 0.459 1e-110
147844703 1961 hypothetical protein VITISV_002644 [Viti 0.807 0.174 0.530 1e-110
15232914414 protein trichome birefringence-like 22 [ 0.922 0.946 0.461 1e-107
224115394342 predicted protein [Populus trichocarpa] 0.792 0.985 0.523 1e-107
>gi|255552672|ref|XP_002517379.1| conserved hypothetical protein [Ricinus communis] gi|223543390|gb|EEF44921.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/403 (54%), Positives = 290/403 (71%), Gaps = 8/403 (1%)

Query: 19  ERERCLSTGRLAPFLLPCLCLTTILSLFL-YFPNPFEAV-SKREIQQKGAPIVKPPEGNA 76
           ++++C+   R+APFLL  L LTTI SLFL Y PNPF+ +  K +  QK   I    E   
Sbjct: 16  KKDKCIDMERVAPFLLSFLFLTTIFSLFLLYSPNPFKPIIPKHDRDQKLLLINSQKEEE- 74

Query: 77  ILNCNLYEGRWIQYRRDFNYKNSSC--IPEARNCFLHGRTDRDFLNWRWKPYACNLPKFD 134
             NC+L++G+WI   +   Y NSSC  IP ++NCF HGR D DFL WRWKP  C+LP+FD
Sbjct: 75  --NCDLFKGQWIPDLKGSQYTNSSCTTIPNSKNCFRHGRKDADFLYWRWKPDKCDLPRFD 132

Query: 135 PRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFI 194
            + FL++VRG  +AFIGDSV+ N +ESL+CLLS+ EVP   YKD+ ++NRIWHFP HDF 
Sbjct: 133 SKAFLEIVRGKALAFIGDSVARNHMESLLCLLSQGEVPVDAYKDTEDRNRIWHFPNHDFT 192

Query: 195 LMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFFRQIYL 254
           L  LW++FLVA E+RMINGS S  ++L +DKVD++W  +L T+DY++IS+G WFFR I+L
Sbjct: 193 LKILWTKFLVAGEERMINGSSSGVFDLYLDKVDDNWATDLHTLDYIIISDGHWFFRPIHL 252

Query: 255 YKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRTFSPTHFEH 314
           +KG  V+ CV C EPN+T    + A+ MA R AL +I  CK+C+ IVT+VRTFSP+HFE+
Sbjct: 253 HKGSNVIACVYCNEPNITDRGINFAVSMAFRAALSHIIHCKKCKDIVTLVRTFSPSHFEN 312

Query: 315 GSWDTGGICNRTKPSDERQIIWVGEPWNIRKIQVEETERMGKEGKEQGKSFVAMDVTKAM 374
           G WDTGG CNRT P  +++I +    W +R +QVEE ER  ++ + QGK F A+D+T+AM
Sbjct: 313 GFWDTGGSCNRTSPFSKQEIDFAAREWELRNVQVEEIERANRK-RRQGKRFKALDITRAM 371

Query: 375 LMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPIDTWNEFLMAIL 417
           LMRPDGHPG YWGN   K + DC+HWCLPGPID WN+ L+ +L
Sbjct: 372 LMRPDGHPGAYWGNKWMKGYNDCVHWCLPGPIDLWNDLLLTVL 414




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141311|ref|XP_002324017.1| predicted protein [Populus trichocarpa] gi|222867019|gb|EEF04150.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296087706|emb|CBI34962.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225452538|ref|XP_002275185.1| PREDICTED: uncharacterized protein LOC100257711 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356550921|ref|XP_003543831.1| PREDICTED: uncharacterized protein LOC100806002 [Glycine max] Back     alignment and taxonomy information
>gi|449459418|ref|XP_004147443.1| PREDICTED: uncharacterized protein LOC101218871 [Cucumis sativus] Back     alignment and taxonomy information
>gi|297818414|ref|XP_002877090.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297322928|gb|EFH53349.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|147844703|emb|CAN82134.1| hypothetical protein VITISV_002644 [Vitis vinifera] Back     alignment and taxonomy information
>gi|15232914|ref|NP_189454.1| protein trichome birefringence-like 22 [Arabidopsis thaliana] gi|11994133|dbj|BAB01135.1| unnamed protein product [Arabidopsis thaliana] gi|17979061|gb|AAL49798.1| unknown protein [Arabidopsis thaliana] gi|21436103|gb|AAM51298.1| unknown protein [Arabidopsis thaliana] gi|332643888|gb|AEE77409.1| protein trichome birefringence-like 22 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224115394|ref|XP_002317022.1| predicted protein [Populus trichocarpa] gi|222860087|gb|EEE97634.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query425
TAIR|locus:2091388414 TBL22 "AT3G28150" [Arabidopsis 0.922 0.946 0.461 3.6e-105
TAIR|locus:2146062526 TBL21 "AT5G15890" [Arabidopsis 0.854 0.690 0.384 7.7e-71
TAIR|locus:2020628416 TBL27 "TRICHOME BIREFRINGENCE- 0.76 0.776 0.393 1.8e-68
TAIR|locus:2146077426 TBL19 "AT5G15900" [Arabidopsis 0.792 0.791 0.389 3.1e-67
TAIR|locus:2128489430 TBL24 "AT4G23790" [Arabidopsis 0.8 0.790 0.392 5.1e-67
TAIR|locus:2035342456 TBL25 "AT1G01430" [Arabidopsis 0.8 0.745 0.380 2.2e-66
TAIR|locus:2136113432 TBL23 "AT4G11090" [Arabidopsis 0.790 0.777 0.383 2.9e-64
TAIR|locus:2125048442 TBL26 "AT4G01080" [Arabidopsis 0.861 0.828 0.359 4.2e-63
TAIR|locus:2138043533 TBL18 "AT4G25360" [Arabidopsis 0.781 0.622 0.351 2.1e-52
TAIR|locus:2153077501 YLS7 "AT5G51640" [Arabidopsis 0.781 0.662 0.341 3.5e-52
TAIR|locus:2091388 TBL22 "AT3G28150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
 Identities = 187/405 (46%), Positives = 260/405 (64%)

Query:    17 KKERERCLSTGRLAPFLLPCLCLTTILSLFLYFPNPFEAVSKREIQQKGAPIVKPPEGNA 76
             K ER   ++ GR +PF L   C+T   + F  + NPF++++ + +     P + P     
Sbjct:    15 KSERWMMMNIGRFSPFFLSSFCITLFFTGFFVYQNPFKSIADQNVLSF-QPQIDP----- 68

Query:    77 ILNCNLYEGRWIQYRRDFNYKNSSC--IPEARNCFLHGRTDRDFLNWRWKPYACNLPKFD 134
                C+L++G W+  +R   Y NSSC  IP+++NC   GR D+DFL WRWKP  C+LP+F+
Sbjct:    69 --ECDLFKGHWVPDKRGSLYTNSSCATIPDSKNCIKQGRPDKDFLFWRWKPDGCDLPRFN 126

Query:   135 PRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFI 194
             P+ FL MVRG KM FIGDSV+ N +ESL+CLLS EE PK +YKD  ++NRIW+FP+HDF 
Sbjct:   127 PKAFLSMVRGKKMNFIGDSVARNHMESLLCLLSMEETPKDIYKDGEDRNRIWYFPKHDFT 186

Query:   195 LMNLWSRFLVAA-EQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFFRQIY 253
             L   W++FLV   E+R  N + +  ++L I K+DE W   L   D  ++S   WFFR I+
Sbjct:   187 LSTSWTKFLVEERERRDSNNTGTGLFDLDIGKIDEGWFNGLPNTDIAIVSAAHWFFRPIF 246

Query:   254 LYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECR-GIVTVVRTFSPTHF 312
             +++GD  +GC+ C  PN+T++SP    ++     L  IN C+ C+  +VTV+RT SP HF
Sbjct:   247 IHRGDETLGCIYCNLPNMTQISPEEGFKLVYSAVLRQINECEMCKKDLVTVLRTISPAHF 306

Query:   313 EHGSWDTGGICNRTKPSDERQIIWVGEPWNIRKIQVEETERMGKEGKEQGKSFVAMDVTK 372
             E+G+WDTGG C+RT P  E +I        IRK Q+E+ E + K G +  K F  +DVT+
Sbjct:   307 ENGTWDTGGTCSRTSPFGENKIDLQSNEMKIRKSQIEQLEGITKRGNK-AKKFAVLDVTR 365

Query:   373 AMLMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPIDTWNEFLMAIL 417
              M MRPDGHP  YWGN   K + DC+HWCLPGPID WN+FLMAI+
Sbjct:   366 VMQMRPDGHPNGYWGNKWMKGYNDCVHWCLPGPIDAWNDFLMAII 410




GO:0010411 "xyloglucan metabolic process" evidence=IMP
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2146062 TBL21 "AT5G15890" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020628 TBL27 "TRICHOME BIREFRINGENCE-LIKE 27" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2146077 TBL19 "AT5G15900" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128489 TBL24 "AT4G23790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035342 TBL25 "AT1G01430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136113 TBL23 "AT4G11090" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125048 TBL26 "AT4G01080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138043 TBL18 "AT4G25360" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153077 YLS7 "AT5G51640" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query425
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 5e-73
PLN02629387 PLN02629, PLN02629, powdery mildew resistance 5 5e-27
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 9e-14
>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
 Score =  229 bits (586), Expect = 5e-73
 Identities = 94/288 (32%), Positives = 142/288 (49%), Gaps = 18/288 (6%)

Query: 130 LPKFDPRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFP 189
           LP+FD + FL+ +RG ++ F+GDS+S NQ ESLVCLLS+ E PK    +   +   + F 
Sbjct: 1   LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLERDGRLFRFRFK 60

Query: 190 EHDFILMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFF 249
           +++  +   WS FLV ++       +     L++D +DE W+      D +V ++G W+ 
Sbjct: 61  DYNVTIEFYWSPFLVESDNAEEGKRV-----LKLDSIDEKWSKLWPGADVLVFNSGHWWL 115

Query: 250 RQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRTFSP 309
            +         +G   C++ N  ++    A + AL T   +++            RTFSP
Sbjct: 116 HR------KVYIGWDYCQKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTRVFFRTFSP 169

Query: 310 THFEHGSWDTGGICNRTKPSDERQIIWVGEPWNIRKIQVEETERMGKEGKEQGKSFVAMD 369
            HFE G W+TGG C  T+P       + G    +  I  E   R   +   +      +D
Sbjct: 170 VHFEGGEWNTGGSCYETEPLLG--SEYKGLTPEMIDIVNEVLSRAAMKTPVKL-----LD 222

Query: 370 VTKAMLMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPIDTWNEFLMAIL 417
           +T     R DGHP  Y      K  +DCLHWCLPG  DTWNE L+A+L
Sbjct: 223 ITLLSQYRKDGHPSVYRKPGPPKKEQDCLHWCLPGVPDTWNELLLALL 270


The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270

>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 425
PLN02629387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.93
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 97.56
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=3.1e-112  Score=861.19  Aligned_cols=320  Identities=27%  Similarity=0.511  Sum_probs=271.1

Q ss_pred             CCCCCcCcccceeecCCCCCcCCCCC---ccccccccccCCCCccCceeeeeCCCCCCCCCCHHHHHHHHcCCcEEEEec
Q 041432           76 AILNCNLYEGRWIQYRRDFNYKNSSC---IPEARNCFLHGRTDRDFLNWRWKPYACNLPKFDPRIFLDMVRGNKMAFIGD  152 (425)
Q Consensus        76 ~~~~Cd~~~G~WV~d~~~PlY~~~~C---i~~~~~C~~nGRpD~~yl~WRWqP~~C~Lprfd~~~fL~~lRgKri~FVGD  152 (425)
                      +.+.||+|+|+||+|+++|||++++|   |+++|||++|||||++|++|||||++|+||||||.+||++|||||||||||
T Consensus        49 ~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVGD  128 (387)
T PLN02629         49 NQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGD  128 (387)
T ss_pred             CccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEecc
Confidence            56889999999999999999999999   899999999999999999999999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHhhccccCCceeeecCCCCceEEEeccccEEEEEEEeceeehhhhhcccCCCcceeeeeeeccchhhhh
Q 041432          153 SVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFILMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTA  232 (425)
Q Consensus       153 Sl~Rnq~~SL~CLL~~~~~p~~~~~~~~~~~~~~~f~~yn~Tv~f~wspfLv~~~~~~~~~~~~~~~~l~lD~~~~~W~~  232 (425)
                      ||+|||||||+|||++++.+..+.....++.++|+|++||+||+||||||||+.+...      +...|+||+++.. +.
T Consensus       129 SL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~------~~~~l~LD~id~~-a~  201 (387)
T PLN02629        129 SLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ------GKRVLKLEEISGN-AN  201 (387)
T ss_pred             ccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCC------CceeEEecCcchh-hh
Confidence            9999999999999997543333344445678899999999999999999999986542      2346899988753 66


Q ss_pred             ccCCccEEEEecccccceeheeecCCeEeeeecC--CCCCccccChHHHHHHHHHHHHHHHhcC-CCCCceEEEEEEcCC
Q 041432          233 NLQTIDYVVISNGLWFFRQIYLYKGDTVVGCVDC--EEPNVTKVSPSGAIQMALRTALVYINGC-KECRGIVTVVRTFSP  309 (425)
Q Consensus       233 ~~~~~DvLVfNtGhWw~r~~~~~~~g~~vg~~~~--~~~~~~~~~~~~Ay~~al~t~~~wv~~~-~~~~~~vvffRt~SP  309 (425)
                      .+.++|||||||||||.++.      .++||.++  ...++++|++.+||++||+||++||++. ++.+++| ||||+||
T Consensus       202 ~w~~~DvlVfntghWw~~~~------~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~v-ffrT~SP  274 (387)
T PLN02629        202 AWRDADVLIFNTGHWWSHQG------SLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRV-FFQSISP  274 (387)
T ss_pred             hhccCCEEEEeCccccCCCC------eeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEE-EEEecCc
Confidence            77789999999999999864      44566555  4456899999999999999999999765 4557776 9999999


Q ss_pred             CCCCCCCCCCCC-----CCC-cccCCCCccccccCCChhhhHHHHHHHHHhhhcccccCcceEEeeccccccCCCCCCCC
Q 041432          310 THFEHGSWDTGG-----ICN-RTKPSDERQIIWVGEPWNIRKIQVEETERMGKEGKEQGKSFVAMDVTKAMLMRPDGHPG  383 (425)
Q Consensus       310 ~Hf~~g~W~~gg-----~C~-~T~P~~~~~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~v~lLdIT~ls~~R~DaHps  383 (425)
                      +||+||+||+||     +|+ +|+|+.+++ ..++...+|+ ++++++++       ++.+|++||||+||++|||||||
T Consensus       275 ~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~-~~~~~~~~~~-~ve~v~~~-------~~~~v~lLDIT~ls~lR~DgHPs  345 (387)
T PLN02629        275 THYNPSEWSAGASTTTKNCYGETTPMSGMT-YPGAYPDQMR-VVDEVIRG-------MHNPAYLLDITLLSELRKDGHPS  345 (387)
T ss_pred             ccccCCCcCCCCCCCCCCCccCCccCcCcc-ccCcchHHHH-HHHHHHHh-------cCCceEEEechhhhhcCCCCCcc
Confidence            999999999875     687 899998544 3455555554 44444332       56799999999999999999999


Q ss_pred             CCCCC------CCCCCCCCcccccCCCcchhHHHHHHHHHH
Q 041432          384 DYWGN------LRNKDFRDCLHWCLPGPIDTWNEFLMAILE  418 (425)
Q Consensus       384 ~y~~~------~~~~~~~DC~HWCLPGv~DtWNelL~~~L~  418 (425)
                      +|++.      +++..++||+||||||||||||||||++|.
T Consensus       346 ~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~  386 (387)
T PLN02629        346 IYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF  386 (387)
T ss_pred             cccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence            99521      334568999999999999999999999986



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query425
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 46.0 bits (108), Expect = 2e-05
 Identities = 41/290 (14%), Positives = 89/290 (30%), Gaps = 73/290 (25%)

Query: 140 DMVRGNKMAFIGDSVSMNQVE-SLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFILMNL 198
           D++   + AF+ +      V+     +LSKEE+   +       +         F  +  
Sbjct: 20  DILSVFEDAFVDN-FDCKDVQDMPKSILSKEEI-DHIIMSKDAVSGTLRL----FWTLLS 73

Query: 199 WSRFLVAAEQRMINGSLSAAYNLQIDKV-DEDWTANLQTIDYVVISNGLWFFRQIYLYKG 257
               +V   Q+ +   L   Y   +  +  E    ++ T  Y+   + L+   Q++    
Sbjct: 74  KQEEMV---QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF---- 126

Query: 258 DTVVGCVDCEEPNVTKVSPSGAIQMALR----TALVYINGCKECRG----IVTVVRTFSP 309
                     + NV+++ P   ++ AL        V I+G     G     + V  ++  
Sbjct: 127 ---------AKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS-GKTWVALDVCLSYKV 176

Query: 310 -THFEHG-SWDTGGICNRTKPSDERQIIW-----VGEPWNIRKIQVEETERMGKEGKEQG 362
               +    W     CN   P    +++      +   W  R       +      + + 
Sbjct: 177 QCKMDFKIFWLNLKNCNS--PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234

Query: 363 KSFVAMDVTKAMLMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPI--DTWN 410
           +                         L++K + +CL   L   +  +  N
Sbjct: 235 RRL-----------------------LKSKPYENCL---L---VLLNVQN 255


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query425
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 81.0
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=81.00  E-value=1.5  Score=38.51  Aligned_cols=51  Identities=12%  Similarity=0.163  Sum_probs=33.6

Q ss_pred             CccEEEEecccccceeheeecCCeEeeeecCCCCCccccChHHHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCCC
Q 041432          236 TIDYVVISNGLWFFRQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRTFSPTHF  312 (425)
Q Consensus       236 ~~DvLVfNtGhWw~r~~~~~~~g~~vg~~~~~~~~~~~~~~~~Ay~~al~t~~~wv~~~~~~~~~vvffRt~SP~Hf  312 (425)
                      .+|+|||+.|..     ..                   ....+.|+..|++.++.+.+..+ ...+ +|-+..|...
T Consensus        74 ~pd~Vvi~~G~N-----D~-------------------~~~~~~~~~~l~~ii~~l~~~~p-~~~i-i~~~~~P~~~  124 (200)
T 4h08_A           74 KFDVIHFNNGLH-----GF-------------------DYTEEEYDKSFPKLIKIIRKYAP-KAKL-IWANTTPVRT  124 (200)
T ss_dssp             CCSEEEECCCSS-----CT-------------------TSCHHHHHHHHHHHHHHHHHHCT-TCEE-EEECCCCCEE
T ss_pred             CCCeEEEEeeeC-----CC-------------------CCCHHHHHHHHHHHHHHHhhhCC-CccE-EEeccCCCcc
Confidence            489999999853     10                   01246788899998888865432 3344 7888777543




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query425
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 85.31
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 84.09
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein BT2961
species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=85.31  E-value=0.14  Score=42.34  Aligned_cols=14  Identities=43%  Similarity=0.914  Sum_probs=12.6

Q ss_pred             cCCcEEEEecchhH
Q 041432          143 RGNKMAFIGDSVSM  156 (425)
Q Consensus       143 RgKri~FVGDSl~R  156 (425)
                      .||+|+|+|||++-
T Consensus         7 ~~kkI~~~GDS~T~   20 (248)
T d3bzwa1           7 QGKKVGYIGDSITD   20 (248)
T ss_dssp             TTCEEEEEESTTTC
T ss_pred             CCCEEEEEehHHcc
Confidence            68999999999984



>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure