Citrus Sinensis ID: 041432
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 425 | ||||||
| 255552672 | 418 | conserved hypothetical protein [Ricinus | 0.929 | 0.944 | 0.543 | 1e-128 | |
| 224141311 | 414 | predicted protein [Populus trichocarpa] | 0.957 | 0.983 | 0.530 | 1e-121 | |
| 296087706 | 419 | unnamed protein product [Vitis vinifera] | 0.948 | 0.961 | 0.496 | 1e-116 | |
| 225452538 | 419 | PREDICTED: uncharacterized protein LOC10 | 0.948 | 0.961 | 0.491 | 1e-115 | |
| 356550921 | 446 | PREDICTED: uncharacterized protein LOC10 | 0.962 | 0.917 | 0.479 | 1e-115 | |
| 449459418 | 432 | PREDICTED: uncharacterized protein LOC10 | 0.96 | 0.944 | 0.468 | 1e-111 | |
| 297818414 | 415 | predicted protein [Arabidopsis lyrata su | 0.924 | 0.946 | 0.459 | 1e-110 | |
| 147844703 | 1961 | hypothetical protein VITISV_002644 [Viti | 0.807 | 0.174 | 0.530 | 1e-110 | |
| 15232914 | 414 | protein trichome birefringence-like 22 [ | 0.922 | 0.946 | 0.461 | 1e-107 | |
| 224115394 | 342 | predicted protein [Populus trichocarpa] | 0.792 | 0.985 | 0.523 | 1e-107 |
| >gi|255552672|ref|XP_002517379.1| conserved hypothetical protein [Ricinus communis] gi|223543390|gb|EEF44921.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/403 (54%), Positives = 290/403 (71%), Gaps = 8/403 (1%)
Query: 19 ERERCLSTGRLAPFLLPCLCLTTILSLFL-YFPNPFEAV-SKREIQQKGAPIVKPPEGNA 76
++++C+ R+APFLL L LTTI SLFL Y PNPF+ + K + QK I E
Sbjct: 16 KKDKCIDMERVAPFLLSFLFLTTIFSLFLLYSPNPFKPIIPKHDRDQKLLLINSQKEEE- 74
Query: 77 ILNCNLYEGRWIQYRRDFNYKNSSC--IPEARNCFLHGRTDRDFLNWRWKPYACNLPKFD 134
NC+L++G+WI + Y NSSC IP ++NCF HGR D DFL WRWKP C+LP+FD
Sbjct: 75 --NCDLFKGQWIPDLKGSQYTNSSCTTIPNSKNCFRHGRKDADFLYWRWKPDKCDLPRFD 132
Query: 135 PRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFI 194
+ FL++VRG +AFIGDSV+ N +ESL+CLLS+ EVP YKD+ ++NRIWHFP HDF
Sbjct: 133 SKAFLEIVRGKALAFIGDSVARNHMESLLCLLSQGEVPVDAYKDTEDRNRIWHFPNHDFT 192
Query: 195 LMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFFRQIYL 254
L LW++FLVA E+RMINGS S ++L +DKVD++W +L T+DY++IS+G WFFR I+L
Sbjct: 193 LKILWTKFLVAGEERMINGSSSGVFDLYLDKVDDNWATDLHTLDYIIISDGHWFFRPIHL 252
Query: 255 YKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRTFSPTHFEH 314
+KG V+ CV C EPN+T + A+ MA R AL +I CK+C+ IVT+VRTFSP+HFE+
Sbjct: 253 HKGSNVIACVYCNEPNITDRGINFAVSMAFRAALSHIIHCKKCKDIVTLVRTFSPSHFEN 312
Query: 315 GSWDTGGICNRTKPSDERQIIWVGEPWNIRKIQVEETERMGKEGKEQGKSFVAMDVTKAM 374
G WDTGG CNRT P +++I + W +R +QVEE ER ++ + QGK F A+D+T+AM
Sbjct: 313 GFWDTGGSCNRTSPFSKQEIDFAAREWELRNVQVEEIERANRK-RRQGKRFKALDITRAM 371
Query: 375 LMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPIDTWNEFLMAIL 417
LMRPDGHPG YWGN K + DC+HWCLPGPID WN+ L+ +L
Sbjct: 372 LMRPDGHPGAYWGNKWMKGYNDCVHWCLPGPIDLWNDLLLTVL 414
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224141311|ref|XP_002324017.1| predicted protein [Populus trichocarpa] gi|222867019|gb|EEF04150.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|296087706|emb|CBI34962.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225452538|ref|XP_002275185.1| PREDICTED: uncharacterized protein LOC100257711 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356550921|ref|XP_003543831.1| PREDICTED: uncharacterized protein LOC100806002 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449459418|ref|XP_004147443.1| PREDICTED: uncharacterized protein LOC101218871 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297818414|ref|XP_002877090.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297322928|gb|EFH53349.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|147844703|emb|CAN82134.1| hypothetical protein VITISV_002644 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|15232914|ref|NP_189454.1| protein trichome birefringence-like 22 [Arabidopsis thaliana] gi|11994133|dbj|BAB01135.1| unnamed protein product [Arabidopsis thaliana] gi|17979061|gb|AAL49798.1| unknown protein [Arabidopsis thaliana] gi|21436103|gb|AAM51298.1| unknown protein [Arabidopsis thaliana] gi|332643888|gb|AEE77409.1| protein trichome birefringence-like 22 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|224115394|ref|XP_002317022.1| predicted protein [Populus trichocarpa] gi|222860087|gb|EEE97634.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 425 | ||||||
| TAIR|locus:2091388 | 414 | TBL22 "AT3G28150" [Arabidopsis | 0.922 | 0.946 | 0.461 | 3.6e-105 | |
| TAIR|locus:2146062 | 526 | TBL21 "AT5G15890" [Arabidopsis | 0.854 | 0.690 | 0.384 | 7.7e-71 | |
| TAIR|locus:2020628 | 416 | TBL27 "TRICHOME BIREFRINGENCE- | 0.76 | 0.776 | 0.393 | 1.8e-68 | |
| TAIR|locus:2146077 | 426 | TBL19 "AT5G15900" [Arabidopsis | 0.792 | 0.791 | 0.389 | 3.1e-67 | |
| TAIR|locus:2128489 | 430 | TBL24 "AT4G23790" [Arabidopsis | 0.8 | 0.790 | 0.392 | 5.1e-67 | |
| TAIR|locus:2035342 | 456 | TBL25 "AT1G01430" [Arabidopsis | 0.8 | 0.745 | 0.380 | 2.2e-66 | |
| TAIR|locus:2136113 | 432 | TBL23 "AT4G11090" [Arabidopsis | 0.790 | 0.777 | 0.383 | 2.9e-64 | |
| TAIR|locus:2125048 | 442 | TBL26 "AT4G01080" [Arabidopsis | 0.861 | 0.828 | 0.359 | 4.2e-63 | |
| TAIR|locus:2138043 | 533 | TBL18 "AT4G25360" [Arabidopsis | 0.781 | 0.622 | 0.351 | 2.1e-52 | |
| TAIR|locus:2153077 | 501 | YLS7 "AT5G51640" [Arabidopsis | 0.781 | 0.662 | 0.341 | 3.5e-52 |
| TAIR|locus:2091388 TBL22 "AT3G28150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 187/405 (46%), Positives = 260/405 (64%)
Query: 17 KKERERCLSTGRLAPFLLPCLCLTTILSLFLYFPNPFEAVSKREIQQKGAPIVKPPEGNA 76
K ER ++ GR +PF L C+T + F + NPF++++ + + P + P
Sbjct: 15 KSERWMMMNIGRFSPFFLSSFCITLFFTGFFVYQNPFKSIADQNVLSF-QPQIDP----- 68
Query: 77 ILNCNLYEGRWIQYRRDFNYKNSSC--IPEARNCFLHGRTDRDFLNWRWKPYACNLPKFD 134
C+L++G W+ +R Y NSSC IP+++NC GR D+DFL WRWKP C+LP+F+
Sbjct: 69 --ECDLFKGHWVPDKRGSLYTNSSCATIPDSKNCIKQGRPDKDFLFWRWKPDGCDLPRFN 126
Query: 135 PRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFI 194
P+ FL MVRG KM FIGDSV+ N +ESL+CLLS EE PK +YKD ++NRIW+FP+HDF
Sbjct: 127 PKAFLSMVRGKKMNFIGDSVARNHMESLLCLLSMEETPKDIYKDGEDRNRIWYFPKHDFT 186
Query: 195 LMNLWSRFLVAA-EQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFFRQIY 253
L W++FLV E+R N + + ++L I K+DE W L D ++S WFFR I+
Sbjct: 187 LSTSWTKFLVEERERRDSNNTGTGLFDLDIGKIDEGWFNGLPNTDIAIVSAAHWFFRPIF 246
Query: 254 LYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECR-GIVTVVRTFSPTHF 312
+++GD +GC+ C PN+T++SP ++ L IN C+ C+ +VTV+RT SP HF
Sbjct: 247 IHRGDETLGCIYCNLPNMTQISPEEGFKLVYSAVLRQINECEMCKKDLVTVLRTISPAHF 306
Query: 313 EHGSWDTGGICNRTKPSDERQIIWVGEPWNIRKIQVEETERMGKEGKEQGKSFVAMDVTK 372
E+G+WDTGG C+RT P E +I IRK Q+E+ E + K G + K F +DVT+
Sbjct: 307 ENGTWDTGGTCSRTSPFGENKIDLQSNEMKIRKSQIEQLEGITKRGNK-AKKFAVLDVTR 365
Query: 373 AMLMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPIDTWNEFLMAIL 417
M MRPDGHP YWGN K + DC+HWCLPGPID WN+FLMAI+
Sbjct: 366 VMQMRPDGHPNGYWGNKWMKGYNDCVHWCLPGPIDAWNDFLMAII 410
|
|
| TAIR|locus:2146062 TBL21 "AT5G15890" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020628 TBL27 "TRICHOME BIREFRINGENCE-LIKE 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2146077 TBL19 "AT5G15900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2128489 TBL24 "AT4G23790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2035342 TBL25 "AT1G01430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2136113 TBL23 "AT4G11090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2125048 TBL26 "AT4G01080" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2138043 TBL18 "AT4G25360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2153077 YLS7 "AT5G51640" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 425 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 5e-73 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 5e-27 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 9e-14 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 229 bits (586), Expect = 5e-73
Identities = 94/288 (32%), Positives = 142/288 (49%), Gaps = 18/288 (6%)
Query: 130 LPKFDPRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFP 189
LP+FD + FL+ +RG ++ F+GDS+S NQ ESLVCLLS+ E PK + + + F
Sbjct: 1 LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLERDGRLFRFRFK 60
Query: 190 EHDFILMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTANLQTIDYVVISNGLWFF 249
+++ + WS FLV ++ + L++D +DE W+ D +V ++G W+
Sbjct: 61 DYNVTIEFYWSPFLVESDNAEEGKRV-----LKLDSIDEKWSKLWPGADVLVFNSGHWWL 115
Query: 250 RQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRTFSP 309
+ +G C++ N ++ A + AL T +++ RTFSP
Sbjct: 116 HR------KVYIGWDYCQKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTRVFFRTFSP 169
Query: 310 THFEHGSWDTGGICNRTKPSDERQIIWVGEPWNIRKIQVEETERMGKEGKEQGKSFVAMD 369
HFE G W+TGG C T+P + G + I E R + + +D
Sbjct: 170 VHFEGGEWNTGGSCYETEPLLG--SEYKGLTPEMIDIVNEVLSRAAMKTPVKL-----LD 222
Query: 370 VTKAMLMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPIDTWNEFLMAIL 417
+T R DGHP Y K +DCLHWCLPG DTWNE L+A+L
Sbjct: 223 ITLLSQYRKDGHPSVYRKPGPPKKEQDCLHWCLPGVPDTWNELLLALL 270
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 425 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.93 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 97.56 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-112 Score=861.19 Aligned_cols=320 Identities=27% Similarity=0.511 Sum_probs=271.1
Q ss_pred CCCCCcCcccceeecCCCCCcCCCCC---ccccccccccCCCCccCceeeeeCCCCCCCCCCHHHHHHHHcCCcEEEEec
Q 041432 76 AILNCNLYEGRWIQYRRDFNYKNSSC---IPEARNCFLHGRTDRDFLNWRWKPYACNLPKFDPRIFLDMVRGNKMAFIGD 152 (425)
Q Consensus 76 ~~~~Cd~~~G~WV~d~~~PlY~~~~C---i~~~~~C~~nGRpD~~yl~WRWqP~~C~Lprfd~~~fL~~lRgKri~FVGD 152 (425)
+.+.||+|+|+||+|+++|||++++| |+++|||++|||||++|++|||||++|+||||||.+||++|||||||||||
T Consensus 49 ~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVGD 128 (387)
T PLN02629 49 NQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGD 128 (387)
T ss_pred CccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEecc
Confidence 56889999999999999999999999 899999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhhccccCCceeeecCCCCceEEEeccccEEEEEEEeceeehhhhhcccCCCcceeeeeeeccchhhhh
Q 041432 153 SVSMNQVESLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFILMNLWSRFLVAAEQRMINGSLSAAYNLQIDKVDEDWTA 232 (425)
Q Consensus 153 Sl~Rnq~~SL~CLL~~~~~p~~~~~~~~~~~~~~~f~~yn~Tv~f~wspfLv~~~~~~~~~~~~~~~~l~lD~~~~~W~~ 232 (425)
||+|||||||+|||++++.+..+.....++.++|+|++||+||+||||||||+.+... +...|+||+++.. +.
T Consensus 129 SL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~------~~~~l~LD~id~~-a~ 201 (387)
T PLN02629 129 SLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ------GKRVLKLEEISGN-AN 201 (387)
T ss_pred ccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCC------CceeEEecCcchh-hh
Confidence 9999999999999997543333344445678899999999999999999999986542 2346899988753 66
Q ss_pred ccCCccEEEEecccccceeheeecCCeEeeeecC--CCCCccccChHHHHHHHHHHHHHHHhcC-CCCCceEEEEEEcCC
Q 041432 233 NLQTIDYVVISNGLWFFRQIYLYKGDTVVGCVDC--EEPNVTKVSPSGAIQMALRTALVYINGC-KECRGIVTVVRTFSP 309 (425)
Q Consensus 233 ~~~~~DvLVfNtGhWw~r~~~~~~~g~~vg~~~~--~~~~~~~~~~~~Ay~~al~t~~~wv~~~-~~~~~~vvffRt~SP 309 (425)
.+.++|||||||||||.++. .++||.++ ...++++|++.+||++||+||++||++. ++.+++| ||||+||
T Consensus 202 ~w~~~DvlVfntghWw~~~~------~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~v-ffrT~SP 274 (387)
T PLN02629 202 AWRDADVLIFNTGHWWSHQG------SLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRV-FFQSISP 274 (387)
T ss_pred hhccCCEEEEeCccccCCCC------eeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEE-EEEecCc
Confidence 77789999999999999864 44566555 4456899999999999999999999765 4557776 9999999
Q ss_pred CCCCCCCCCCCC-----CCC-cccCCCCccccccCCChhhhHHHHHHHHHhhhcccccCcceEEeeccccccCCCCCCCC
Q 041432 310 THFEHGSWDTGG-----ICN-RTKPSDERQIIWVGEPWNIRKIQVEETERMGKEGKEQGKSFVAMDVTKAMLMRPDGHPG 383 (425)
Q Consensus 310 ~Hf~~g~W~~gg-----~C~-~T~P~~~~~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~v~lLdIT~ls~~R~DaHps 383 (425)
+||+||+||+|| +|+ +|+|+.+++ ..++...+|+ ++++++++ ++.+|++||||+||++|||||||
T Consensus 275 ~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~-~~~~~~~~~~-~ve~v~~~-------~~~~v~lLDIT~ls~lR~DgHPs 345 (387)
T PLN02629 275 THYNPSEWSAGASTTTKNCYGETTPMSGMT-YPGAYPDQMR-VVDEVIRG-------MHNPAYLLDITLLSELRKDGHPS 345 (387)
T ss_pred ccccCCCcCCCCCCCCCCCccCCccCcCcc-ccCcchHHHH-HHHHHHHh-------cCCceEEEechhhhhcCCCCCcc
Confidence 999999999875 687 899998544 3455555554 44444332 56799999999999999999999
Q ss_pred CCCCC------CCCCCCCCcccccCCCcchhHHHHHHHHHH
Q 041432 384 DYWGN------LRNKDFRDCLHWCLPGPIDTWNEFLMAILE 418 (425)
Q Consensus 384 ~y~~~------~~~~~~~DC~HWCLPGv~DtWNelL~~~L~ 418 (425)
+|++. +++..++||+||||||||||||||||++|.
T Consensus 346 ~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 346 IYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred cccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 99521 334568999999999999999999999986
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 425 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 2e-05
Identities = 41/290 (14%), Positives = 89/290 (30%), Gaps = 73/290 (25%)
Query: 140 DMVRGNKMAFIGDSVSMNQVE-SLVCLLSKEEVPKFVYKDSAEQNRIWHFPEHDFILMNL 198
D++ + AF+ + V+ +LSKEE+ + + F +
Sbjct: 20 DILSVFEDAFVDN-FDCKDVQDMPKSILSKEEI-DHIIMSKDAVSGTLRL----FWTLLS 73
Query: 199 WSRFLVAAEQRMINGSLSAAYNLQIDKV-DEDWTANLQTIDYVVISNGLWFFRQIYLYKG 257
+V Q+ + L Y + + E ++ T Y+ + L+ Q++
Sbjct: 74 KQEEMV---QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF---- 126
Query: 258 DTVVGCVDCEEPNVTKVSPSGAIQMALR----TALVYINGCKECRG----IVTVVRTFSP 309
+ NV+++ P ++ AL V I+G G + V ++
Sbjct: 127 ---------AKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS-GKTWVALDVCLSYKV 176
Query: 310 -THFEHG-SWDTGGICNRTKPSDERQIIW-----VGEPWNIRKIQVEETERMGKEGKEQG 362
+ W CN P +++ + W R + + +
Sbjct: 177 QCKMDFKIFWLNLKNCNS--PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234
Query: 363 KSFVAMDVTKAMLMRPDGHPGDYWGNLRNKDFRDCLHWCLPGPI--DTWN 410
+ L++K + +CL L + + N
Sbjct: 235 RRL-----------------------LKSKPYENCL---L---VLLNVQN 255
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 425 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 81.0 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=81.00 E-value=1.5 Score=38.51 Aligned_cols=51 Identities=12% Similarity=0.163 Sum_probs=33.6
Q ss_pred CccEEEEecccccceeheeecCCeEeeeecCCCCCccccChHHHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCCC
Q 041432 236 TIDYVVISNGLWFFRQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRTFSPTHF 312 (425)
Q Consensus 236 ~~DvLVfNtGhWw~r~~~~~~~g~~vg~~~~~~~~~~~~~~~~Ay~~al~t~~~wv~~~~~~~~~vvffRt~SP~Hf 312 (425)
.+|+|||+.|.. .. ....+.|+..|++.++.+.+..+ ...+ +|-+..|...
T Consensus 74 ~pd~Vvi~~G~N-----D~-------------------~~~~~~~~~~l~~ii~~l~~~~p-~~~i-i~~~~~P~~~ 124 (200)
T 4h08_A 74 KFDVIHFNNGLH-----GF-------------------DYTEEEYDKSFPKLIKIIRKYAP-KAKL-IWANTTPVRT 124 (200)
T ss_dssp CCSEEEECCCSS-----CT-------------------TSCHHHHHHHHHHHHHHHHHHCT-TCEE-EEECCCCCEE
T ss_pred CCCeEEEEeeeC-----CC-------------------CCCHHHHHHHHHHHHHHHhhhCC-CccE-EEeccCCCcc
Confidence 489999999853 10 01246788899998888865432 3344 7888777543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 425 | |||
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 85.31 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 84.09 |
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein BT2961 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=85.31 E-value=0.14 Score=42.34 Aligned_cols=14 Identities=43% Similarity=0.914 Sum_probs=12.6
Q ss_pred cCCcEEEEecchhH
Q 041432 143 RGNKMAFIGDSVSM 156 (425)
Q Consensus 143 RgKri~FVGDSl~R 156 (425)
.||+|+|+|||++-
T Consensus 7 ~~kkI~~~GDS~T~ 20 (248)
T d3bzwa1 7 QGKKVGYIGDSITD 20 (248)
T ss_dssp TTCEEEEEESTTTC
T ss_pred CCCEEEEEehHHcc
Confidence 68999999999984
|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|