Citrus Sinensis ID: 041467
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 746 | 2.2.26 [Sep-21-2011] | |||||||
| C0LGT6 | 1031 | LRR receptor-like serine/ | yes | no | 0.856 | 0.619 | 0.344 | 2e-96 | |
| C0LGP4 | 1010 | Probable LRR receptor-lik | no | no | 0.832 | 0.614 | 0.348 | 3e-93 | |
| Q9SD62 | 1025 | Putative receptor-like pr | no | no | 0.836 | 0.608 | 0.332 | 4e-85 | |
| Q9ZUI0 | 980 | Putative leucine-rich rep | no | no | 0.801 | 0.610 | 0.297 | 3e-56 | |
| Q9LYN8 | 1192 | Leucine-rich repeat recep | no | no | 0.788 | 0.493 | 0.272 | 1e-54 | |
| Q8VZG8 | 1045 | Probable LRR receptor-lik | no | no | 0.782 | 0.558 | 0.286 | 2e-54 | |
| O49318 | 1124 | Probable leucine-rich rep | no | no | 0.812 | 0.539 | 0.288 | 2e-53 | |
| Q9FL28 | 1173 | LRR receptor-like serine/ | no | no | 0.798 | 0.508 | 0.295 | 2e-52 | |
| Q9SHI2 | 1101 | Leucine-rich repeat recep | no | no | 0.819 | 0.554 | 0.276 | 4e-51 | |
| O49545 | 1003 | Leucine-rich repeat recep | no | no | 0.836 | 0.622 | 0.296 | 6e-51 |
| >sp|C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1 | Back alignment and function desciption |
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Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 268/778 (34%), Positives = 386/778 (49%), Gaps = 139/778 (17%)
Query: 1 NSSNNLLQYSKPLCILR-TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIP 59
N S NLL+ P + + L ++L +N +P ++G L L L LS N+ + P
Sbjct: 127 NMSYNLLEGRIPSSLSNCSRLSTVDLSSNHLGHGVPSELGSLSKLAILDLSKNNLTGNFP 186
Query: 60 ANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID----CGGRIDSLGHLKSLLLL 115
A+L + ++L KL N + +I E+ L ++ +I GG +L ++ SL L
Sbjct: 187 ASLGNLTSLQKLDFAYNQMRGEIPDEVARLTQMVFFQIALNSFSGGFPPALYNISSLESL 246
Query: 116 SLAFNQF------------------------------LSLSNASSLEMIEFSRNQFSGGV 145
SLA N F +L+N SSLE + S N SG +
Sbjct: 247 SLADNSFSGNLRADFGYLLPNLRRLLLGTNQFTGAIPKTLANISSLERFDISSNYLSGSI 306
Query: 146 SVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIAN 205
+ F +L+NL WL + N+LG+ +++ L+FI + NC++LE L N G LP SIAN
Sbjct: 307 PLSFGKLRNLWWLGIRNNSLGNNSSSGLEFIGAVANCTQLEYLDVGYNRLGGELPASIAN 366
Query: 206 LSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGG 265
LS+T+ + +G N IS TIPH I NLV+L L++E++ L G +P G+ NLQ++++
Sbjct: 367 LSTTLTSLFLGQNLISGTIPHDIGNLVSLQELSLETNMLSGELPVSFGKLLNLQVVDLYS 426
Query: 266 NHLQGSILSSLGNLTLQTYLF---NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQIL 322
N + G I S GN+T L N+ G IP SL C+ LL L + N+L T+PQ+IL
Sbjct: 427 NAISGEIPSYFGNMTRLQKLHLNSNSFHGRIPQSLGRCRYLLDLWMDTNRLNGTIPQEIL 486
Query: 323 SVTTLSLYLELDNNLLNGSLPPEVG----------------------------------- 347
+ +L+ Y++L NN L G P EVG
Sbjct: 487 QIPSLA-YIDLSNNFLTGHFPEEVGKLELLVGLGASYNKLSGKMPQAIGGCLSMEFLFMQ 545
Query: 348 ---------------NLKNL------LRLHIPEYPENLSFFELLNLSYNYFGSEVPTKGV 386
+LKN+ L IP Y +L LNLS N F VPT GV
Sbjct: 546 GNSFDGAIPDISRLVSLKNVDFSNNNLSGRIPRYLASLPSLRNLNLSMNKFEGRVPTTGV 605
Query: 387 FNNKTRFSIIGNGKLCGGLDELHLPSCRYKGSI---KPSITSLKVLIPVIVSC----LIL 439
F N T S+ GN +CGG+ E+ L C + S KP KV+ + + LI+
Sbjct: 606 FRNATAVSVFGNTNICGGVREMQLKPCIVQASPRKRKPLSVRKKVVSGICIGIASLLLII 665
Query: 440 LVISFIFYARRKKPAHK------DSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGF 493
+V S ++ +RKK + DS L M + +S+ EL AT+ FS N I G F
Sbjct: 666 IVASLCWFMKRKKKNNASDGNPSDSTTLGMFHE--KVSYEELHSATSRFSSTNLIGSGNF 723
Query: 494 NIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544
V+ VA+KV NL + A++SF AE + IRHRNL+K+IT+CSS+D EG
Sbjct: 724 GNVFKGLLGPENKLVAVKVLNLLKHGATKSFMAECETFKGIRHRNLVKLITVCSSLDSEG 783
Query: 545 FDFKA-----ISNGQLRLC--------------NLSLTQRVNIAIDVAFAIEYLRHHCQP 585
DF+A + G L + +L+ +++NIAIDVA A+EYL HC
Sbjct: 784 NDFRALVYEFMPKGSLDMWLQLEDLERVNDHSRSLTPAEKLNIAIDVASALEYLHVHCHD 843
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
+ H D+KPSNILLD D+ HV D GLA+ LY Y+ + SS+ G+ GT+GY AP
Sbjct: 844 PVAHCDIKPSNILLDDDLTAHVSDFGLAQLLYKYDRESFLNQFSSA-GVRGTIGYAAP 900
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Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Reduces transformation by Rhizobium radiobacter probably by inducing plant defense during the interaction. Binding to the effector AvrPto1 from P.syringae blocks the downstream plant immune response. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 343 bits (880), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 256/734 (34%), Positives = 378/734 (51%), Gaps = 113/734 (15%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
T L +NL N G++P +G L LE+L LS+N+ IP++++ + + L +NN
Sbjct: 162 TNLVQLNLYGNNMRGKLPTSLGNLTLLEQLALSHNNLEGEIPSDVAQLTQIWSLQLVANN 221
Query: 78 LVRDILTEICSLFKLERLRIDC---GGRID-SLG-HLKSLLLLSLAFNQFL-----SLSN 127
+ +L L+ L I GR+ LG L +LL ++ N F +LSN
Sbjct: 222 FSGVFPPALYNLSSLKLLGIGYNHFSGRLRPDLGILLPNLLSFNMGGNYFTGSIPTTLSN 281
Query: 128 ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLER 187
S+LE + + N +G + F + NL L L N+LGS ++ +L+F+ LTNC++LE
Sbjct: 282 ISTLERLGMNENNLTGSIPT-FGNVPNLKLLFLHTNSLGSDSSRDLEFLTSLTNCTQLET 340
Query: 188 LYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGT 247
L RN G LP SIANLS+ + + +G IS +IP+ I NL+NL L ++ + L G
Sbjct: 341 LGIGRNRLGGDLPISIANLSAKLVTLDLGGTLISGSIPYDIGNLINLQKLILDQNMLSGP 400
Query: 248 IPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLF---NNLQGNIPSSLANCKSLL 304
+P +G+ NL+ L++ N L G I + +GN+T+ L N +G +P+SL NC LL
Sbjct: 401 LPTSLGKLLNLRYLSLFSNRLSGGIPAFIGNMTMLETLDLSNNGFEGIVPTSLGNCSHLL 460
Query: 305 GLSVSHNKLTSTLPQQILSVTTL--------SLY---------------LELDNNLLNGS 341
L + NKL T+P +I+ + L SL L L +N L+G
Sbjct: 461 ELWIGDNKLNGTIPLEIMKIQQLLRLDMSGNSLIGSLPQDIGALQNLGTLSLGDNKLSGK 520
Query: 342 LPPEVGN--------------------LKNLLRLH------------IPEYPENLSFFEL 369
LP +GN LK L+ + IPEY + S E
Sbjct: 521 LPQTLGNCLTMESLFLEGNLFYGDIPDLKGLVGVKEVDLSNNDLSGSIPEYFASFSKLEY 580
Query: 370 LNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYKGSIKPSITSL--- 426
LNLS+N +VP KG+F N T SI+GN LCGG+ L C S PS+
Sbjct: 581 LNLSFNNLEGKVPVKGIFENATTVSIVGNNDLCGGIMGFQLKPCL---SQAPSVVKKHSS 637
Query: 427 ---KVLIPVIVSCLILLV-----ISFIFYARRKKPAHKDSNMLS-MKQQFPMISHAELSK 477
KV+I V V +LL+ ++ I+ +RKK ++ S ++ IS+ +L
Sbjct: 638 RLKKVVIGVSVGITLLLLLFMASVTLIWLRKRKKNKETNNPTPSTLEVLHEKISYGDLRN 697
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHR 528
ATN FS +N + G F VY VA+KV N++++ A +SF AE +L++IRHR
Sbjct: 698 ATNGFSSSNMVGSGSFGTVYKALLLTEKKVVAVKVLNMQRRGAMKSFMAECESLKDIRHR 757
Query: 529 NLIKIITICSSIDFEGFDFKAI-----SNGQLRLC--------------NLSLTQRVNIA 569
NL+K++T CSSIDF+G +F+A+ NG L + L+L +R+NIA
Sbjct: 758 NLVKLLTACSSIDFQGNEFRALIYEFMPNGSLDMWLHPEEVEEIHRPSRTLTLLERLNIA 817
Query: 570 IDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETAS 629
IDVA ++YL HC I H DLKPSN+LLD D+ HV D GLA+ L ++ + S
Sbjct: 818 IDVASVLDYLHVHCHEPIAHCDLKPSNVLLDDDLTAHVSDFGLARLLLKFDEESFFNQLS 877
Query: 630 SSIGINGTVGYVAP 643
S+ G+ GT+GY AP
Sbjct: 878 SA-GVRGTIGYAAP 890
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 316 bits (810), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 268/805 (33%), Positives = 377/805 (46%), Gaps = 181/805 (22%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
+FLR +NL +N F+G IP ++G L L+ L +SNN F IP LS+ S+L L SN+
Sbjct: 105 SFLRSLNLADNFFHGAIPSEVGNLFRLQYLNMSNNLFGGVIPVVLSNCSSLSTLDLSSNH 164
Query: 78 LVRDI---------------------------LTEICSLFKLERLRIDCGGRI-DSLGHL 109
L + + L + SL L+ + G I + L
Sbjct: 165 LEQGVPLEFGSLSKLVLLSLGRNNLTGKFPASLGNLTSLQMLDFIYNQIEGEIPGDIARL 224
Query: 110 KSLLLLSLAFNQF-----LSLSNASSLEMIEFSRNQFSGGVSVDF-SRLKNLSWLNLGVN 163
K ++ +A N+F + N SSL + + N FSG + DF S L NL L +G+N
Sbjct: 225 KQMIFFRIALNKFNGVFPPPIYNLSSLIFLSITGNSFSGTLRPDFGSLLPNLQILYMGIN 284
Query: 164 NLGSGT-------------------------------------------------ANELD 174
+ +GT + +LD
Sbjct: 285 SF-TGTIPETLSNISSLRQLDIPSNHLTGKIPLSFGRLQNLLLLGLNNNSLGNYSSGDLD 343
Query: 175 FINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNL 234
F+ LTNCS+L+ L N G LP IANLS+ + ++++G N IS +IPHGI NLV+L
Sbjct: 344 FLGALTNCSQLQYLNVGFNKLGGQLPVFIANLSTQLTELSLGGNLISGSIPHGIGNLVSL 403
Query: 235 NWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLF---NNLQG 291
L + + L G +PP +GE L+ + + N L G I SSLGN++ TYL+ N+ +G
Sbjct: 404 QTLDLGENLLTGKLPPSLGELSELRKVLLYSNGLSGEIPSSLGNISGLTYLYLLNNSFEG 463
Query: 292 NIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLS----------------------- 328
+IPSSL +C LL L++ NKL ++P +++ + +L
Sbjct: 464 SIPSSLGSCSYLLDLNLGTNKLNGSIPHELMELPSLVVLNVSFNLLVGPLRQDIGKLKFL 523
Query: 329 LYLELDNNLLNGSLPPEVGNL--------------------------------KNLLRLH 356
L L++ N L+G +P + N KN L
Sbjct: 524 LALDVSYNKLSGQIPQTLANCLSLEFLLLQGNSFVGPIPDIRGLTGLRFLDLSKNNLSGT 583
Query: 357 IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSC--- 413
IPEY N S + LNLS N F VPT+GVF N + S+ GN LCGG+ L L C
Sbjct: 584 IPEYMANFSKLQNLNLSLNNFDGAVPTEGVFRNTSAMSVFGNINLCGGIPSLQLQPCSVE 643
Query: 414 --RYKGSIKPSITSLKVLIPVIVSCLILLVISFIFYARRKKPAHK-----DSNMLSMKQQ 466
R S++ IT + + L L V+ +Y R K D + +K
Sbjct: 644 LPRRHSSVRKIITICVSAVMAALLLLCLCVVYLCWYKLRVKSVRANNNENDRSFSPVKSF 703
Query: 467 FPMISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAA 517
+ IS+ EL K T FS +N I G F V+ VA+KV NL ++ A++SF A
Sbjct: 704 YEKISYDELYKTTGGFSSSNLIGSGNFGAVFKGFLGSKNKAVAIKVLNLCKRGAAKSFIA 763
Query: 518 EFNALRNIRHRNLIKIITICSSIDFEGFDFKAI-----SNGQLRLC-------------- 558
E AL IRHRNL+K++TICSS DFEG DF+A+ NG L +
Sbjct: 764 ECEALGGIRHRNLVKLVTICSSSDFEGNDFRALVYEFMPNGNLDMWLHPDEIEETGNPSR 823
Query: 559 NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
L L R+NIAIDVA A+ YL +C I H D+KPSNILLD+D+ HV D GLA+ L
Sbjct: 824 TLGLFARLNIAIDVASALVYLHTYCHNPIAHCDIKPSNILLDKDLTAHVSDFGLAQLLLK 883
Query: 619 YEPGTTAETASSSIGINGTVGYVAP 643
++ T SS G+ GT+GY AP
Sbjct: 884 FDR-DTFHIQFSSAGVRGTIGYAAP 907
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9ZUI0|Y2241_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS=Arabidopsis thaliana GN=At2g24130 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 209/703 (29%), Positives = 320/703 (45%), Gaps = 105/703 (14%)
Query: 20 LRYINLVNNGFNGEIP-HQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNL 78
L+YI+L NN GEIP + L L L+L +N + +P++LS+ +NL + +SN L
Sbjct: 168 LQYIDLSNNSLTGEIPLNYHCHLKELRFLLLWSNKLTGTVPSSLSNSTNLKWMDLESNML 227
Query: 79 VRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLS-------------L 125
++ +++ S + L L L++N F+S L
Sbjct: 228 SGELPSQVIS-------------------KMPQLQFLYLSYNHFVSHNNNTNLEPFFASL 268
Query: 126 SNASSLEMIEFSRNQFSGGVSVDFSRLK-NLSWLNLGVNNLGSGTANELDFINL------ 178
+N+S L+ +E + N G ++ L NL ++L N + E+ +
Sbjct: 269 ANSSDLQELELAGNSLGGEITSSVRHLSVNLVQIHLDQNRIHGSIPPEISNLLNLTLLNL 328
Query: 179 ------------LTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPH 226
L SKLER+Y + N G +P + ++ + + + N +S +IP
Sbjct: 329 SSNLLSGPIPRELCKLSKLERVYLSNNHLTGEIPMELGDIPR-LGLLDVSRNNLSGSIPD 387
Query: 227 GIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSI----LSSLGNLTLQ 282
NL L L + + L GT+P +G+ NL++L++ N+L G+I +S+L NL L
Sbjct: 388 SFGNLSQLRRLLLYGNHLSGTVPQSLGKCINLEILDLSHNNLTGTIPVEVVSNLRNLKLY 447
Query: 283 TYLF-NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGS 341
L N+L G IP L+ +L + +S N+L+ +P Q+ S L +L L N + +
Sbjct: 448 LNLSSNHLSGPIPLELSKMDMVLSVDLSSNELSGKIPPQLGSCIALE-HLNLSRNGFSST 506
Query: 342 LPPEVGNLKNLLRLH---------IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTR 392
LP +G L L L IP + S + LN S+N V KG F+ T
Sbjct: 507 LPSSLGQLPYLKELDVSFNRLTGAIPPSFQQSSTLKHLNFSFNLLSGNVSDKGSFSKLTI 566
Query: 393 FSIIGNGKLCGGLDELHLPSCRYKGSIKPSITSLK---VLIPVIVSCLILLVISFIF--- 446
S +G+ LCG + + +C+ K + + + PV+ LV F
Sbjct: 567 ESFLGDSLLCGSIKGMQ--ACKKKHKYPSVLLPVLLSLIATPVLCVFGYPLVQRSRFGKN 624
Query: 447 ---YARRKKPAHKDSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIVYN----- 498
YA+ + + N K +P IS+ +L AT F+ ++ I G F VY
Sbjct: 625 LTVYAKEEVEDEEKQNQNDPK--YPRISYQQLIAATGGFNASSLIGSGRFGHVYKGVLRN 682
Query: 499 ---VAMKVANLKQK-EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQ 554
VA+KV + K E S SF E L+ RHRNLI+IIT CS F + NG
Sbjct: 683 NTKVAVKVLDPKTALEFSGSFKRECQILKRTRHRNLIRIITTCSKPGFNALVLPLMPNGS 742
Query: 555 LRLC---------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605
L NL L Q VNI DVA I YL H+ +VH DLKPSNILLD ++
Sbjct: 743 LERHLYPGEYSSKNLDLIQLVNICSDVAEGIAYLHHYSPVKVVHCDLKPSNILLDDEMTA 802
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIG-----INGTVGYVAP 643
V D G+++ + G E T + S S G + G+VGY+AP
Sbjct: 803 LVTDFGISRLVQGVEE-TVSTDDSVSFGSTDGLLCGSVGYIAP 844
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LYN8|EXS_ARATH Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1 | Back alignment and function description |
|---|
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 194/712 (27%), Positives = 319/712 (44%), Gaps = 124/712 (17%)
Query: 25 LVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILT 84
L NN NG IP + +L L L L +N+F+ IP +L +NL++ + N L +
Sbjct: 408 LTNNQINGSIPEDLWKL-PLMALDLDSNNFTGEIPKSLWKSTNLMEFTASYNRLEGYLPA 466
Query: 85 EICSLFKLERLRID----CGGRIDSLGHLKSLLLLSLAFNQF-----LSLSNASSLEMIE 135
EI + L+RL + G +G L SL +L+L N F + L + +SL ++
Sbjct: 467 EIGNAASLKRLVLSDNQLTGEIPREIGKLTSLSVLNLNANMFQGKIPVELGDCTSLTTLD 526
Query: 136 FSRNQFSGGVSVDFSRLKNLSWLNLGVNNLG-------SGTANELDFINL---------- 178
N G + + L L L L NNL S ++++ +L
Sbjct: 527 LGSNNLQGQIPDKITALAQLQCLVLSYNNLSGSIPSKPSAYFHQIEMPDLSFLQHHGIFD 586
Query: 179 -------------LTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIP 225
L C L + + N G +P S++ L++ + + + N ++ +IP
Sbjct: 587 LSYNRLSGPIPEELGECLVLVEISLSNNHLSGEIPASLSRLTN-LTILDLSGNALTGSIP 645
Query: 226 HGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL 285
+ N + L L + ++QL G IP G +L LN+ N L G + +SLGNL T++
Sbjct: 646 KEMGNSLKLQGLNLANNQLNGHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLKELTHM 705
Query: 286 ---FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSL 342
FNNL G + S L+ + L+GL + NK T +P ++ ++T L YL++ NLL+G +
Sbjct: 706 DLSFNNLSGELSSELSTMEKLVGLYIEQNKFTGEIPSELGNLTQLE-YLDVSENLLSGEI 764
Query: 343 PPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLC 402
P ++ L NL E LNL+ N EVP+ GV + ++ + GN +LC
Sbjct: 765 PTKICGLPNL---------------EFLNLAKNNLRGEVPSDGVCQDPSKALLSGNKELC 809
Query: 403 G---GLDELHLPSCRYKGSIKPSITSLKVLIPVIVSCLILLVISFIFYARRKKPAHKDS- 458
G G D C+ +G+ S + L+ + + V S +A K+ +D
Sbjct: 810 GRVVGSD------CKIEGTKLRSAWGIAGLMLGFTIIVFVFVFSLRRWAMTKRVKQRDDP 863
Query: 459 ------------------------------NMLSMKQQFPMISHAELSKATNNFSPANKI 488
N+ +Q + ++ +AT++FS N I
Sbjct: 864 ERMEESRLKGFVDQNLYFLSGSRSREPLSINIAMFEQPLLKVRLGDIVEATDHFSKKNII 923
Query: 489 REGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI 540
+GGF VY VA+K + + + +R F AE L ++H NL+ ++ CS
Sbjct: 924 GDGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFS 983
Query: 541 DFEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGD 591
+ + ++ + NG L L L ++R+ IA+ A + +L H P I+H D
Sbjct: 984 EEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRD 1043
Query: 592 LKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
+K SNILLD D V D GLA+ + + E+ S++ I GT GY+ P
Sbjct: 1044 IKASNILLDGDFEPKVADFGLARLI------SACESHVSTV-IAGTFGYIPP 1088
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Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. In seeds, required for enhancing cell size and the rate of embryonic development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8VZG8|Y4885_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 192/670 (28%), Positives = 293/670 (43%), Gaps = 86/670 (12%)
Query: 23 INLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82
+ + N G +P G+L +LE L L +N S IP +++ + L L D+NN +
Sbjct: 339 LEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGIANSTELTVLQLDTNNFTGFL 398
Query: 83 LTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFS 142
IC KLE L +D H + + SL + SL + F N FS
Sbjct: 399 PDTICRGGKLENLTLDDN-------HFEGPVPKSL--------RDCKSLIRVRFKGNSFS 443
Query: 143 GGVSVDFSRLKNLSWLNLGVNNL-GSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPH 201
G +S F L++++L NN G +AN KL + N G +P
Sbjct: 444 GDISEAFGVYPTLNFIDLSNNNFHGQLSAN-------WEQSQKLVAFILSNNSITGAIPP 496
Query: 202 SIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLL 261
I N++ + Q+ + SNRI+ +P I N+ ++ L + ++L G IP I NL+ L
Sbjct: 497 EIWNMTQ-LSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYL 555
Query: 262 NIGGNHLQGSILSSLGNLTLQTYL---FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLP 318
++ N I +L NL Y+ N+L IP L L L +S+N+L +
Sbjct: 556 DLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEIS 615
Query: 319 QQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRL-HIPEYPENLSFFELLNLSYNYF 377
Q S+ L L+L +N L+G +PP + K++L L H+ ++S+N
Sbjct: 616 SQFRSLQNLE-RLDLSHNNLSGQIPP---SFKDMLALTHV-------------DVSHNNL 658
Query: 378 GSEVPTKGVFNNKTRFSIIGNGKLCGGLDELH-LPSCRY---KGSIKPSITSLKVLIPVI 433
+P F N + GN LCG ++ L C K S K + +L+P+I
Sbjct: 659 QGPIPDNAAFRNAPPDAFEGNKDLCGSVNTTQGLKPCSITSSKKSHKDRNLIIYILVPII 718
Query: 434 VSCLILLVISFIFYARRKK----PAHKDSN----MLSMKQQFPMISHAELSKATNNFSPA 485
+ +IL V + IF RK+ H DS LS+ + + E+ KAT F P
Sbjct: 719 GAIIILSVCAGIFICFRKRTKQIEEHTDSESGGETLSIFSFDGKVRYQEIIKATGEFDPK 778
Query: 486 NKIREGGFNIVY-----NVAMKVANLKQKEAS--------RSFAAEFNALRNIRHRNLIK 532
I GG VY N M V L + S + F E AL IRHRN++K
Sbjct: 779 YLIGTGGHGKVYKAKLPNAIMAVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVK 838
Query: 533 IITICSSIDFEGFDFKAISNGQLRLC--------NLSLTQRVNIAIDVAFAIEYLRHHCQ 584
+ CS ++ + G LR L +R+N+ VA A+ Y+ H
Sbjct: 839 LFGFCSHRRNTFLVYEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRS 898
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPV 644
P+IVH D+ NILL +D + D G AK L +P ++ +A + GT GYVAP
Sbjct: 899 PAIVHRDISSGNILLGEDYEAKISDFGTAKLL---KPDSSNWSA-----VAGTYGYVAPE 950
Query: 645 IIAARNLENR 654
+ A + +
Sbjct: 951 LAYAMKVTEK 960
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49318|Y2317_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 206/713 (28%), Positives = 311/713 (43%), Gaps = 107/713 (15%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
L+ + L N NG IP ++G+L + + S N S IP LS S L L N L
Sbjct: 303 LKKLYLYQNQLNGTIPKELGKLSKVMEIDFSENLLSGEIPVELSKISELRLLYLFQNKLT 362
Query: 80 RDILTEICSLFKLERLRID----CGGRIDSLGHLKSLLLLSLAFNQF-----LSLSNASS 130
I E+ L L +L + G +L S+ L L N L S
Sbjct: 363 GIIPNELSKLRNLAKLDLSINSLTGPIPPGFQNLTSMRQLQLFHNSLSGVIPQGLGLYSP 422
Query: 131 LEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVN----NLGSGT------------ANEL- 173
L +++FS NQ SG + + NL LNLG N N+ G N L
Sbjct: 423 LWVVDFSENQLSGKIPPFICQQSNLILLNLGSNRIFGNIPPGVLRCKSLLQLRVVGNRLT 482
Query: 174 -DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLV 232
F L L + ++N F G LP I ++++ + +N+ SS +P+ I L
Sbjct: 483 GQFPTELCKLVNLSAIELDQNRFSGPLPPEIGT-CQKLQRLHLAANQFSSNLPNEISKLS 541
Query: 233 NLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLF---NNL 289
NL + S+ L G IP I LQ L++ N GS+ LG+L L N
Sbjct: 542 NLVTFNVSSNSLTGPIPSEIANCKMLQRLDLSRNSFIGSLPPELGSLHQLEILRLSENRF 601
Query: 290 QGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNL 349
GNIP ++ N L L + N + ++P Q+ +++L + + L N +G +PPE+GNL
Sbjct: 602 SGNIPFTIGNLTHLTELQMGGNLFSGSIPPQLGLLSSLQIAMNLSYNDFSGEIPPEIGNL 661
Query: 350 KNLLRL---------HIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGK 400
L+ L IP ENLS N SYN ++P +F N T S +GN
Sbjct: 662 HLLMYLSLNNNHLSGEIPTTFENLSSLLGCNFSYNNLTGQLPHTQIFQNMTLTSFLGNKG 721
Query: 401 LCGGLDELHLPSCRYKGSIKPSITSLK----------------------VLIPVIVSCLI 438
LCGG HL SC S P I+SLK +LI ++V L
Sbjct: 722 LCGG----HLRSCDPSHSSWPHISSLKAGSARRGRIIIIVSSVIGGISLLLIAIVVHFLR 777
Query: 439 LLVISFIFYARRKKPAHKDSNMLSM-KQQFPMISHAELSKATNNFSPANKIREGGFNIVY 497
V Y K+P ++S++ + K++F + ++ +AT F + + G VY
Sbjct: 778 NPVEPTAPYVHDKEPFFQESDIYFVPKERFTV---KDILEATKGFHDSYIVGRGACGTVY 834
Query: 498 NVAM---KVANLKQKEASRS------------FAAEFNALRNIRHRNLIKIITICSSIDF 542
M K +K+ E++R F AE L IRHRN++++ + C
Sbjct: 835 KAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYH--- 891
Query: 543 EGFD-----FKAISNGQL-------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHG 590
+G + ++ +S G L + ++ R IA+ A + YL H C+P I+H
Sbjct: 892 QGSNSNLLLYEYMSRGSLGELLHGGKSHSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHR 951
Query: 591 DLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
D+K +NIL+D++ HVGD GLAK + + S + G+ GY+AP
Sbjct: 952 DIKSNNILIDENFEAHVGDFGLAKVI-------DMPLSKSVSAVAGSYGYIAP 997
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FL28|FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 204/691 (29%), Positives = 315/691 (45%), Gaps = 95/691 (13%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
T L+ ++L +N GEIP GR+ +L + + N F+ IP ++ + SNL LS NN
Sbjct: 408 TGLKLLDLSHNQMTGEIPRGFGRM-NLTFISIGRNHFTGEIPDDIFNCSNLETLSVADNN 466
Query: 78 LVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL-----SLSNASSLE 132
L + I KL++LRI L +++N + N L
Sbjct: 467 LTGTLKPLIG---KLQKLRI-----------------LQVSYNSLTGPIPREIGNLKDLN 506
Query: 133 MIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNR 192
++ N F+G + + S L L L + N+L E+ + LL+ L +
Sbjct: 507 ILYLHSNGFTGRIPREMSNLTLLQGLRMYSNDLEGPIPEEMFDMKLLS------VLDLSN 560
Query: 193 NGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIP-PL 251
N F G +P + L S + +++ N+ + +IP +++L LN + + L GTIP L
Sbjct: 561 NKFSGQIPALFSKLES-LTYLSLQGNKFNGSIPASLKSLSLLNTFDISDNLLTGTIPGEL 619
Query: 252 IGETPNLQL-LNIGGNHLQGSILSSLGNLTL--QTYLFNNL-QGNIPSSLANCKSLLGLS 307
+ N+QL LN N L G+I LG L + + L NNL G+IP SL CK++ L
Sbjct: 620 LASLKNMQLYLNFSNNLLTGTIPKELGKLEMVQEIDLSNNLFSGSIPRSLQACKNVFTLD 679
Query: 308 VSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRL---------HIP 358
S N L+ +P ++ + + L L N +G +P GN+ +L+ L IP
Sbjct: 680 FSQNNLSGHIPDEVFQGMDMIISLNLSRNSFSGEIPQSFGNMTHLVSLDLSSNNLTGEIP 739
Query: 359 EYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYKGS 418
E NLS + L L+ N VP GVF N ++GN LCG L + + K S
Sbjct: 740 ESLANLSTLKHLKLASNNLKGHVPESGVFKNINASDLMGNTDLCGSKKPLKPCTIKQKSS 799
Query: 419 IKPSITSLKVLI-------------PVIVSCLILLVISFIFYARRKKPAHKDSNMLSMKQ 465
T + ++I +I++C + P + L +K+
Sbjct: 800 HFSKRTRVILIILGSAAALLLVLLLVLILTCCKKKEKKIENSSESSLPDLDSA--LKLKR 857
Query: 466 QFPMISHAELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQ--KEASRSF 515
P EL +AT++F+ AN I + VY +A+KV NLK+ E+ + F
Sbjct: 858 FEP----KELEQATDSFNSANIIGSSSLSTVYKGQLEDGTVIAVKVLNLKEFSAESDKWF 913
Query: 516 AAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI-----SNGQLRLCNL-------SLT 563
E L ++HRNL+KI+ +E KA+ NG L SL
Sbjct: 914 YTEAKTLSQLKHRNLVKILGFA----WESGKTKALVLPFMENGNLEDTIHGSAAPIGSLL 969
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623
+++++ + +A I+YL IVH DLKP+NILLD D V HV D G A+ L E G+
Sbjct: 970 EKIDLCVHIASGIDYLHSGYGFPIVHCDLKPANILLDSDRVAHVSDFGTARILGFREDGS 1029
Query: 624 TAETASSSIGINGTVGYVAPVIIAARNLENR 654
T TAS+S GT+GY+AP R + +
Sbjct: 1030 T--TASTS-AFEGTIGYLAPEFAYMRKVTTK 1057
|
Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of flagellin (flg22), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Flagellin-binding to the receptor is the first step to initiate the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6), resulting in enhanced resistance against pathogens. Binding to the effector AvrPto1 from Pseudomonas syringae blocks the downstream plant immune response. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 195/704 (27%), Positives = 293/704 (41%), Gaps = 93/704 (13%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
T ++ + L N GEIP +IG LI + S N + IP NL L N
Sbjct: 283 TKMKRLYLYTNQLTGEIPREIGNLIDAAEIDFSENQLTGFIPKEFGHILNLKLLHLFENI 342
Query: 78 LVRDILTEICSLFKLERLRIDC----GGRIDSLGHLKSLLLLSLAFNQFLS-----LSNA 128
L+ I E+ L LE+L + G L L L+ L L NQ +
Sbjct: 343 LLGPIPRELGELTLLEKLDLSINRLNGTIPQELQFLPYLVDLQLFDNQLEGKIPPLIGFY 402
Query: 129 SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188
S+ +++ S N SG + F R + L L+LG N L +L C L +L
Sbjct: 403 SNFSVLDMSANSLSGPIPAHFCRFQTLILLSLGSNKLSGNIPRDLK------TCKSLTKL 456
Query: 189 YFNRNGFEGVLPHSIANLSS-----------------------TIKQIAMGSNRISSTIP 225
N G LP + NL + ++++ + +N + IP
Sbjct: 457 MLGDNQLTGSLPIELFNLQNLTALELHQNWLSGNISADLGKLKNLERLRLANNNFTGEIP 516
Query: 226 HGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL 285
I NL + + S+QL G IP +G +Q L++ GN G I LG L L
Sbjct: 517 PEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQRLDLSGNKFSGYIAQELGQLVYLEIL 576
Query: 286 F---NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSL 342
N L G IP S + L+ L + N L+ +P ++ +T+L + L + +N L+G++
Sbjct: 577 RLSDNRLTGEIPHSFGDLTRLMELQLGGNLLSENIPVELGKLTSLQISLNISHNNLSGTI 636
Query: 343 PPEVGNLK---------NLLRLHIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRF 393
P +GNL+ N L IP NL + N+S N VP VF
Sbjct: 637 PDSLGNLQMLEILYLNDNKLSGEIPASIGNLMSLLICNISNNNLVGTVPDTAVFQRMDSS 696
Query: 394 SIIGNGKLCGGLDELHLPSCRYK---------GSIKPSITSLKVLIPVIVSCLILLVISF 444
+ GN LC P + GS + I ++ + VI S ++ +
Sbjct: 697 NFAGNHGLCNSQRSHCQPLVPHSDSKLNWLINGSQRQKILTITCI--VIGSVFLITFLGL 754
Query: 445 IFYARRKKPAH---KDSNMLSMKQQ--FPM--ISHAELSKATNNFSPANKIREGGFNIVY 497
+ +R++PA +D + FP ++ L AT NFS + G VY
Sbjct: 755 CWTIKRREPAFVALEDQTKPDVMDSYYFPKKGFTYQGLVDATRNFSEDVVLGRGACGTVY 814
Query: 498 N--------VAMKVANLKQKEAS--RSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547
+A+K N + + AS SF AE + L IRHRN++K+ C + +
Sbjct: 815 KAEMSGGEVIAVKKLNSRGEGASSDNSFRAEISTLGKIRHRNIVKLYGFCYHQNSNLLLY 874
Query: 548 KAISNGQL--------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+ +S G L + C L R IA+ A + YL H C+P IVH D+K +NILL
Sbjct: 875 EYMSKGSLGEQLQRGEKNCLLDWNARYRIALGAAEGLCYLHHDCRPQIVHRDIKSNNILL 934
Query: 600 DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
D+ HVGD GLAK + + S + G+ GY+AP
Sbjct: 935 DERFQAHVGDFGLAKLI-------DLSYSKSMSAVAGSYGYIAP 971
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49545|BAME1_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 217/732 (29%), Positives = 323/732 (44%), Gaps = 108/732 (14%)
Query: 4 NNLLQYSKPLCILR-TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANL 62
NN L P+ + T LR+++L N F G+IP G +E L +S N IP +
Sbjct: 151 NNNLTGDLPVSVTNLTQLRHLHLGGNYFAGKIPPSYGSWPVIEYLAVSGNELVGKIPPEI 210
Query: 63 SSGSNLIKLSTDSNNLVRDILT-EICSLFKLERLR-IDCG--GRID-SLGHLKSLLLLSL 117
+ + L +L N D L EI +L +L R +CG G I +G L+ L L L
Sbjct: 211 GNLTTLRELYIGYYNAFEDGLPPEIGNLSELVRFDGANCGLTGEIPPEIGKLQKLDTLFL 270
Query: 118 AFNQF-----LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS----- 167
N F L SSL+ ++ S N F+G + F+ LKNL+ LNL N L
Sbjct: 271 QVNVFSGPLTWELGTLSSLKSMDLSNNMFTGEIPASFAELKNLTLLNLFRNKLHGEIPEF 330
Query: 168 -GTANELDFINLLTN----------------------------------CS--KLERLYF 190
G EL+ + L N CS KLE L
Sbjct: 331 IGDLPELEVLQLWENNFTGSIPQKLGENGKLNLVDLSSNKLTGTLPPNMCSGNKLETLIT 390
Query: 191 NRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP 250
N G +P S+ S + +I MG N ++ +IP G+ L L + ++ + L G +P
Sbjct: 391 LGNFLFGSIPDSLGKCES-LTRIRMGENFLNGSIPKGLFGLPKLTQVELQDNYLSGELPV 449
Query: 251 LIGETPNLQLLNIGGNHLQGSILSSLGNLT-LQTYLF--NNLQGNIPSSLANCKSLLGLS 307
G + NL +++ N L G + ++GN T +Q L N QG IPS + + L +
Sbjct: 450 AGGVSVNLGQISLSNNQLSGPLPPAIGNFTGVQKLLLDGNKFQGPIPSEVGKLQQLSKID 509
Query: 308 VSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLK-----NLLRLH----IP 358
SHN + + +I S L +++L N L+G +P E+ +K NL R H IP
Sbjct: 510 FSHNLFSGRIAPEI-SRCKLLTFVDLSRNELSGEIPNEITAMKILNYLNLSRNHLVGSIP 568
Query: 359 EYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCR---Y 415
++ L+ SYN VP G F+ S +GN LCG +L C+
Sbjct: 569 GSISSMQSLTSLDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGP----YLGPCKDGVA 624
Query: 416 KG-----SIKPSITSLKVLIPVIVS-CLILLVISFIFYARR-KKPAHKDSNMLSMKQQFP 468
KG S P S+K+L+ + + C I + I AR KK + + L+ Q+
Sbjct: 625 KGGHQSHSKGPLSASMKLLLVLGLLVCSIAFAVVAIIKARSLKKASESRAWRLTAFQRLD 684
Query: 469 MISHAELSKATNNFSPANKIREGGFNIVYNVAMKVANL----------KQKEASRSFAAE 518
L ++ N I +GG IVY M +L + F AE
Sbjct: 685 FTCDDVL----DSLKEDNIIGKGGAGIVYKGVMPNGDLVAVKRLAAMSRGSSHDHGFNAE 740
Query: 519 FNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL-------RLCNLSLTQRVNIAID 571
L IRHR++++++ CS+ + ++ + NG L + +L R IA++
Sbjct: 741 IQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIALE 800
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSS 631
A + YL H C P IVH D+K +NILLD + HV D GLAKFL + T+E S+
Sbjct: 801 AAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFL---QDSGTSECMSA- 856
Query: 632 IGINGTVGYVAP 643
I G+ GY+AP
Sbjct: 857 --IAGSYGYIAP 866
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 746 | ||||||
| 449440269 | 1041 | PREDICTED: probable LRR receptor-like se | 0.839 | 0.601 | 0.383 | 1e-116 | |
| 255571732 | 923 | serine-threonine protein kinase, plant-t | 0.828 | 0.669 | 0.398 | 1e-114 | |
| 449483698 | 1099 | PREDICTED: probable LRR receptor-like se | 0.837 | 0.568 | 0.376 | 1e-113 | |
| 255571897 | 1013 | serine-threonine protein kinase, plant-t | 0.805 | 0.593 | 0.390 | 1e-113 | |
| 449483700 | 1343 | PREDICTED: LOW QUALITY PROTEIN: putative | 0.833 | 0.463 | 0.391 | 1e-112 | |
| 449440271 | 1343 | PREDICTED: LOW QUALITY PROTEIN: putative | 0.833 | 0.463 | 0.391 | 1e-112 | |
| 224116466 | 1008 | predicted protein [Populus trichocarpa] | 0.833 | 0.617 | 0.376 | 1e-111 | |
| 255585471 | 963 | serine-threonine protein kinase, plant-t | 0.832 | 0.644 | 0.369 | 1e-111 | |
| 224135241 | 985 | predicted protein [Populus trichocarpa] | 0.829 | 0.628 | 0.358 | 1e-109 | |
| 356566660 | 1020 | PREDICTED: probable LRR receptor-like se | 0.837 | 0.612 | 0.360 | 1e-109 |
| >gi|449440269|ref|XP_004137907.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 287/749 (38%), Positives = 403/749 (53%), Gaps = 123/749 (16%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
T L ++ N F G+IPHQ L LE L N+ + IP + + ++++ +S NN
Sbjct: 146 TQLVFLQFGGNRFEGQIPHQFFTLTKLEGLGFGINNLTGRIPPWIGNFTSILGMSFGYNN 205
Query: 78 LVRDILTEICSLFKLERLRID----CGGRIDSLGHLKSLLLLSLAFNQFL---------- 123
+I +EI L +L+RL + G S+ ++ SL LSLA NQ
Sbjct: 206 FQGNIPSEIGRLSRLKRLVVVSNNLTGPVWPSICNITSLTYLSLADNQLQGTLPPNIGFT 265
Query: 124 --------------------SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVN 163
SL+N S L++++F +N+ G + D RLK L LN N
Sbjct: 266 LPNLQALGGGVNNFHGPIPKSLANISGLQILDFPQNKLVGMLPDDMGRLKYLEHLNFASN 325
Query: 164 NLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISST 223
LG G +L+FI+ L NC+ L L + N F GVLP SI NLS+ ++ + +G N +S +
Sbjct: 326 RLGRGKVGDLNFISYLANCTSLRILSLSSNHFGGVLPSSIGNLSTQMRSLVLGQNMLSGS 385
Query: 224 IPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQT 283
IP GI NL+NL L ME + L G+IPP IG+ NL++L + N L G + SS+ NL+ T
Sbjct: 386 IPTGIGNLINLQRLAMEVNFLNGSIPPNIGKLKNLEVLYLNYNELSGPVPSSIANLSSLT 445
Query: 284 YLF---NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNG 340
L+ N L+ +IP+ L C+SLL L +S N L+ T+P++IL +++LS+ L LD+N G
Sbjct: 446 KLYMSHNKLKESIPAGLGQCESLLTLELSSNNLSGTIPKEILYLSSLSMSLALDHNSFTG 505
Query: 341 SLPPEVG---------------------NLKNLLRLH----------------------- 356
LP EVG NL+N +R+
Sbjct: 506 PLPHEVGLLVRLSKLDVSENQLSGDIPTNLENCIRMERLNLGGNQFEGTIPESLGALKGI 565
Query: 357 -------------IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCG 403
IP++ L + LNLSYN F +VP +GVF+N T S+IGN LCG
Sbjct: 566 EELNLSSNNLSGKIPQFLGKLGSLKYLNLSYNNFEGQVPKEGVFSNSTMISVIGNNNLCG 625
Query: 404 GLDELHLPSCRYKGSI-KPSITSLKVLIPV--IVSCLILLV-ISFIFYARRKKPAHKDSN 459
GL ELHLP C+Y + + + +VLIP+ V+ L++LV I F+ + RK +N
Sbjct: 626 GLPELHLPPCKYDRTYSRKKFMAPRVLIPIASTVTFLVILVSIIFVCFVLRKSKKDASTN 685
Query: 460 MLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE 510
S K+ P IS+ ELSK+TN FS N I G F VY VA+KV NL+ +
Sbjct: 686 SSSTKEFLPQISYLELSKSTNGFSKENFIGSGSFGSVYKGILSSDGSIVAIKVLNLQHQG 745
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI-----SNGQLRLC------- 558
AS+SF E NAL NIRHRNL+KIIT CSSID +G +FKA+ SNG L
Sbjct: 746 ASKSFVDECNALSNIRHRNLLKIITSCSSIDVQGNEFKALIFNFMSNGNLDCLLHPTNKQ 805
Query: 559 ----NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
LSL QR+NIAID+A+ ++YL +HC+P I H DLKPSNILLD D+V HVGD GLA+
Sbjct: 806 NNQRRLSLIQRLNIAIDIAYGLDYLHNHCEPPIAHCDLKPSNILLDDDMVAHVGDFGLAR 865
Query: 615 FLYGYEPGTTAETASSSIGINGTVGYVAP 643
F+ T+ + + S+ + G++GY+ P
Sbjct: 866 FMLEGSNDQTSLSQTMSLALKGSIGYIPP 894
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255571732|ref|XP_002526809.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223533813|gb|EEF35544.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 288/722 (39%), Positives = 403/722 (55%), Gaps = 104/722 (14%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
+FLRY++ NN F G+IPH+IGRL L+ L LSNNSF IP NLS SNL+ L+ N
Sbjct: 98 SFLRYVDFRNNSFRGQIPHEIGRLRRLQCLTLSNNSFCGNIPTNLSYCSNLVILNIIDNK 157
Query: 78 LVRDILTEICSLFKLERLRID----CGGRIDSLGHLKSLLLLSLAFNQFL--SLSNASSL 131
LV I E+ SL KLE L + G S+G+L SL L F + SLSNAS+L
Sbjct: 158 LVGSIPAELGSLRKLEALGLAKNNLTGSIPPSIGNLSSLWQL---FTGAIPSSLSNASAL 214
Query: 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFN 191
E + N FSG D L +L ++++ N L ++L+FI+ LTNCS+LE L
Sbjct: 215 EQLALYSNGFSGLFPKDLGLLPHLQYVDISENQL----IDDLNFIDSLTNCSRLEVLDLA 270
Query: 192 RNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPL 251
N F+G LP SIANLS + IA+ N++ + IP G+ NL+NL + + + L G I
Sbjct: 271 SNIFQGTLPSSIANLSRDLMYIALSDNQLHNAIPLGVENLLNLRFFLFDRNYLSGPIVVD 330
Query: 252 IGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL---FNNLQGNIPSSLANCKSLLGLSV 308
L++L++ GN+ G+I S+ NL++ + L FNNL G+IPSSL +C +L+ L +
Sbjct: 331 FKNFSRLEMLDLQGNNFTGTIPISISNLSMLSNLYLGFNNLYGSIPSSLGSCHNLIELDL 390
Query: 309 SHNKLTSTLPQQIL----------------------SVTTLSLYLELD--NNLLNGSLPP 344
S+N+LT ++P Q++ V +L ELD NN L+G +P
Sbjct: 391 SYNRLTGSIPGQVIGLSSLSILLNLGFNGLTGPIPSEVGSLQKLAELDLSNNRLSGMIPD 450
Query: 345 EVGNLKNLLRLHIP------EYPE------NLSFFEL---------------------LN 371
+G +L +LH+ E P+ L F +L LN
Sbjct: 451 TIGKCLSLEQLHLEGNSFSGEIPQVLTALQGLQFLDLSRNNFIGRIPNSLAALDGLKHLN 510
Query: 372 LSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYKGSIKPSIT-SLKVLI 430
LS+N EVP +G+F N + S++GN CGG+ EL LPSC + S K ++T +LKV+I
Sbjct: 511 LSFNQLRGEVPERGIFLNASAVSLLGNNSFCGGITELKLPSCPFTNSKKKNLTLALKVII 570
Query: 431 PVIVSCLILLVISF--IFYARRKKPAHKDSNMLSMKQQFPMISHAELSKATNNFSPANKI 488
PV+V + L F IF+ +++ K+ + S + +F IS+ EL KAT+ FS AN I
Sbjct: 571 PVVVFAIFLAGFVFFSIFWHQKRMSRKKNISTPSFEHKFLRISYTELFKATDGFSKANII 630
Query: 489 REGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS 539
G + VY VA+KV N++Q+ AS SF +E ALR+IRHRNL+K++++CSS
Sbjct: 631 GVGSYGSVYRGTLEQEGIEVAVKVLNMQQRGASSSFMSECQALRSIRHRNLLKLLSVCSS 690
Query: 540 IDFEGFDFKAI-----SNG-------------QLRLCNLSLTQRVNIAIDVAFAIEYLRH 581
ID+E DFKA+ NG Q L N L QR+NIAID+A AIEYL +
Sbjct: 691 IDYEENDFKALIYEFMVNGSLEKWLHAGEGTEQRELGNPKLMQRLNIAIDIASAIEYLHN 750
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYV 641
+I+HGDLKPSN+LLD ++ H+GD GLAK + T SSSI I G+VGYV
Sbjct: 751 GSSSAIIHGDLKPSNVLLDDEMTAHIGDFGLAKVISSMSIETQPH-GSSSIAIRGSVGYV 809
Query: 642 AP 643
AP
Sbjct: 810 AP 811
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449483698|ref|XP_004156663.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 301/800 (37%), Positives = 408/800 (51%), Gaps = 175/800 (21%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
T+L I L +N F+G IP + GRL+ L L LS N+FS IPAN+S + L+ L N
Sbjct: 145 TYLTVIRLDDNNFHGIIPQEFGRLLQLRHLNLSQNNFSGEIPANISHCTKLVSLVLGGNG 204
Query: 78 LVRDI---------------------------LTEICSLFKLERLRIDCGGRIDS----- 105
LV I + SL + +R + G I S
Sbjct: 205 LVGQIPQQFFTLTNLKLIGFAANSLTGSFPSWIGNFSSLLSMSLMRNNFQGSIPSEIGRL 264
Query: 106 --------------------LGHLKSLLLLSLAFNQFL---------------------- 123
+ ++ SL LSL +NQF
Sbjct: 265 SELRFFQVAGNNLTGASWPSICNISSLTYLSLGYNQFKGTLPPDIGLSLPNLQVFGCSGN 324
Query: 124 --------SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDF 175
SL+N SL++I+F N G + D L+NL LNLG N+LGSG A +L+F
Sbjct: 325 NFHGPIPNSLANIVSLQIIDFFDNNLVGTLPDDMGNLRNLERLNLGENSLGSGEAGDLNF 384
Query: 176 INLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLN 235
IN L NC++L L + N F GVLP SIANLS+ + +++G N +S +IP G NL+NL
Sbjct: 385 INSLVNCTRLRALGLDTNHFGGVLPSSIANLSNQLTALSLGYNMLSGSIPSGTTNLINLQ 444
Query: 236 WLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLF---NNLQGN 292
+E + + G+IPP IG NL LL + N G I S+GNL+ T L N L G+
Sbjct: 445 GFGVEGNIMNGSIPPNIGNLKNLVLLYLYENEFTGPIPYSIGNLSSLTKLHMSHNQLDGS 504
Query: 293 IPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEV------ 346
IP+SL CKSL L +S N L T+P++I ++ +LS+ L LD+N GSLP EV
Sbjct: 505 IPTSLGQCKSLTSLKLSSNNLNGTIPKEIFALPSLSITLALDHNSFTGSLPNEVDGLLGL 564
Query: 347 ------------------------------GN------------LKNLLRLH-------- 356
GN LK+L +L+
Sbjct: 565 LELDVSENKLFGDIPNNLDKCTNMERLYLGGNKFGGTIPQSLEALKSLKKLNLSSNNLSG 624
Query: 357 -IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSC-- 413
IP++ L F ++LSYN F +VP +GVF+N T FSIIGN LCGGL ELHLP C
Sbjct: 625 PIPQFLSKLLFLVSVDLSYNNFEGKVPIEGVFSNSTMFSIIGNNNLCGGLHELHLPLCTS 684
Query: 414 -RYKGSIKPSITSLKVLIPV-IVSCLILLVISFI---FYARRKKPAHKDSNMLSMKQQFP 468
+ + S K + S +VLIP+ IV + +++ FI F R+ + +N LS K+ P
Sbjct: 685 NQTRLSNKQFLKS-RVLIPMAIVITFVGILVVFILVCFVLRKSRKDASTTNSLSAKEFIP 743
Query: 469 MISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEF 519
IS+ ELSK+T+ FS N I G F VY VA+KV NL+Q+ AS+SF E
Sbjct: 744 QISYLELSKSTSGFSTENLIGSGSFGSVYKGVLSNDGSVVAVKVLNLQQQGASKSFVDEC 803
Query: 520 NALRNIRHRNLIKIITICSSIDFEGFDFKAI-----SNGQL-----------RLCNLSLT 563
NAL NIRHRNL+KIIT CSSID +G +FKA+ SNG L L LSL
Sbjct: 804 NALSNIRHRNLLKIITSCSSIDGQGNEFKALVFNFMSNGNLDCWLHPKNQGTNLRRLSLI 863
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623
QR+NIAID+A ++YL HC+ I+H D+KPSNILLD D+V HVGD GLA+F+
Sbjct: 864 QRLNIAIDIACGLDYLHTHCETPIIHCDIKPSNILLDDDMVAHVGDFGLARFMLEESNDQ 923
Query: 624 TAETASSSIGINGTVGYVAP 643
+ + + S+ + G++GY+ P
Sbjct: 924 ISFSQTMSLALKGSIGYIPP 943
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255571897|ref|XP_002526891.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223533790|gb|EEF35522.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 279/715 (39%), Positives = 382/715 (53%), Gaps = 114/715 (15%)
Query: 23 INLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82
I+L G IP IGRL LE L++ +N+ + IPA++ + S L LS N L+ ++
Sbjct: 201 ISLAETNLEGNIPEDIGRLTRLEYLLMPDNNLTGTIPASIYNLSRLTILSVARNQLMGNL 260
Query: 83 LTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQF-----LSLSNASSLEMIEFS 137
+I F L ++ L+L N F +SLSNAS L +I F+
Sbjct: 261 SPDIG--FNLPNIQ-----------------QLALGLNHFTGLIPISLSNASQLHLISFT 301
Query: 138 RNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG 197
N+FSG + V+ RL NLSW+ L N LG+ N+L FI+ LTNC+KLERL+ N +G
Sbjct: 302 DNRFSGPIPVELGRLVNLSWIGLSGNMLGTKVGNDLRFISYLTNCTKLERLFVGGNLLKG 361
Query: 198 VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257
LP +IANLS+ I+ +++G N+I TIP GI NLVNLN+L + L G IP IG+
Sbjct: 362 PLPDAIANLSTQIRYLSLGINQIYGTIPEGIGNLVNLNFLDFQYMMLRGNIPDGIGKLHK 421
Query: 258 LQLLNIGGNHLQGSILSSLGNLTLQTYLF---NNLQGNIPSSLANCKSLLGLSVSHNKLT 314
L L I GN L G I S++GNLT + NNL G I +L +C+SLL L +S N L
Sbjct: 422 LLELYIPGNQLVGQIPSTIGNLTSLYEMQLSQNNLSGKISPNLGDCQSLLRLDLSQNDLV 481
Query: 315 STLPQQILSV------------------------------------------TTLSLYLE 332
S++PQ + + +TL L L
Sbjct: 482 SSIPQSVFGILSIVSINLSHNSLTGTLPLEIGNLKQIEDLDVSSNKVSGAIPSTLGLCLS 541
Query: 333 L-----DNNLLNGSLPPEVGNLKNLLRLH---------IPEYPENLSFFELLNLSYNYFG 378
L + N L G +P E+ L+ L L IPE ++ F E+LNLS+N
Sbjct: 542 LVKIRVNGNFLEGIIPEELSALRGLDELDLSHNNLSGMIPESLGSIPFLEILNLSFNDLE 601
Query: 379 SEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYKGSIKPSITSLKVLIPVIVSCLI 438
EVP G+ N + S+ GN KLCGG EL LP+C S K + LI IV I
Sbjct: 602 GEVPQAGILKNTSVISVTGNRKLCGGNPELKLPACVVLHSNKKGSSLATKLIAAIVVAFI 661
Query: 439 LLVISFIFYARRKK--PAHKDSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIV 496
L + F+ RR K + + + LS+K QF IS+ EL +AT+ FS AN I G + V
Sbjct: 662 CLALVASFFIRRCKRSKSKERPSPLSLKDQFIKISYQELLQATDGFSDANLIGFGSYGSV 721
Query: 497 YN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547
Y +A+KV NL+ + AS+SF +E AL++IRHRNL+KI ++C+S+D++G DF
Sbjct: 722 YRGFLHQSQSFIAVKVFNLRHRGASKSFISECKALKHIRHRNLLKISSVCASVDYQGNDF 781
Query: 548 KAI-------------------SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIV 588
+A+ ++ + L NL+L QR++IAI VA A+EYL HCQP IV
Sbjct: 782 RAVIYEFMPRGSLESWLHPQEVADNEHELRNLNLEQRLSIAIGVASAVEYLHCHCQPPIV 841
Query: 589 HGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
H DLKPSN+LLD+D+V HVGD GLAK L E SSS+ I G+VGYV P
Sbjct: 842 HSDLKPSNVLLDEDMVAHVGDFGLAKVLSKVS-DNAREDQSSSVIIKGSVGYVPP 895
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449483700|ref|XP_004156664.1| PREDICTED: LOW QUALITY PROTEIN: putative receptor-like protein kinase At3g47110-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 293/749 (39%), Positives = 398/749 (53%), Gaps = 127/749 (16%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
T L + L +NGF G+IP+++ L LER N+F+ IP + + S+++ +S NN
Sbjct: 138 TKLVVLELSSNGFVGQIPNELSTLTKLERFKFGINNFTGTIPPWVGNFSSILAMSFGRNN 197
Query: 78 LVRDILTEICSLFKLERLRID----CGGRIDSLGHLKSLLLLSLAFNQFL---------- 123
I +EI L K+E + G S+ ++ SL LL N
Sbjct: 198 FHGSIPSEIGRLSKMEFFTVVENNLTGIVPPSIYNISSLTLLQFTKNHLQGTLPPNIGFT 257
Query: 124 --------------------SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVN 163
SL+N SSL++++F N F G V D RLK L LN G N
Sbjct: 258 LPNLQSFAGGINNFDGPIPKSLANISSLQILDFPNNNFFGMVPDDIGRLKYLERLNFGSN 317
Query: 164 NLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISST 223
+LGSG +L+FI+ L NC++L L + N F GV+P SIANLS+ + I +G N +S +
Sbjct: 318 SLGSGKVGDLNFISSLVNCTRLRILGLDTNHFGGVVPSSIANLSNQLVAITLGDNMLSGS 377
Query: 224 IPHGIRNLVNLNWLTMESSQLIGT-IPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQ 282
IP GI NL+NL L ME + + G+ IPP IG +L LL +G N L G I SS+GNLT
Sbjct: 378 IPLGITNLINLQVLAMEGNMMNGSSIPPNIGNLKSLVLLYLGRNGLIGPIPSSIGNLTSL 437
Query: 283 TYLF---NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLN 339
T L+ N G IP+SL CKSL+ L +S N L+ T+P++I S+T+LS+ L LD+N
Sbjct: 438 TNLYLSYNKHDGYIPTSLGECKSLVSLELSSNNLSGTIPKEIFSLTSLSITLTLDHNSFT 497
Query: 340 GSLPPEVG------------------------------------------------NLKN 351
GSLP VG LK+
Sbjct: 498 GSLPDGVGGLLSLLQLDLSENKLSGNIPSNLGKCTSMEQLYLGGNQFEGTIPQSFKTLKS 557
Query: 352 LLRLH---------IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLC 402
L++L+ IPE+ L ++LSYN F +VP +G F+N T FSIIGN LC
Sbjct: 558 LVKLNLSHNNLIGPIPEFLCELPSLMYVDLSYNNFVGKVPEEGAFSNSTMFSIIGNNNLC 617
Query: 403 GGLDELHLPSCRYKGSIKPSITSLKVLIPVI--VSCLILLVISFIFYARRKKPAHKDSNM 460
GL ELHLP+C + +S KVLIP+ V+ +++LV F KK + KD +
Sbjct: 618 DGLQELHLPTCMPNDQTR---SSSKVLIPIASAVTSVVILVSIFCLCFLLKK-SRKDIST 673
Query: 461 LSMKQQF-PMISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE 510
S +F P IS+ ELSK+T+ FS N I G F VY VA+KV NL+Q+
Sbjct: 674 SSFANEFLPQISYLELSKSTDGFSMDNLIGSGSFGTVYKGLLSNGGSIVAIKVLNLQQEG 733
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI-----SNGQLRLC------- 558
AS+SF E NAL NIRHRNL+KIIT CSSID G +FKA+ SNG L
Sbjct: 734 ASKSFVDECNALSNIRHRNLLKIITSCSSIDVHGNEFKALVFNFMSNGNLDGWLHPPNQG 793
Query: 559 ----NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
LSL QR+NIAID+A ++YL +HC+ IVH DLKPSNILLD ++V HVGD GLA+
Sbjct: 794 QNQRRLSLIQRLNIAIDIACGLDYLHNHCETPIVHCDLKPSNILLDDNMVAHVGDFGLAR 853
Query: 615 FLYGYEPGTTAETASSSIGINGTVGYVAP 643
F+ + + S+ + G++GY+ P
Sbjct: 854 FMLERSSDQIFFSQTMSLVLKGSIGYIPP 882
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449440271|ref|XP_004137908.1| PREDICTED: LOW QUALITY PROTEIN: putative receptor-like protein kinase At3g47110-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 293/749 (39%), Positives = 398/749 (53%), Gaps = 127/749 (16%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
T L + L +NGF G+IP+++ L LER N+F+ IP + + S+++ +S NN
Sbjct: 138 TKLVVLELSSNGFVGQIPNELSTLTKLERFKFGINNFTGTIPPWVGNFSSILAMSFGRNN 197
Query: 78 LVRDILTEICSLFKLERLRID----CGGRIDSLGHLKSLLLLSLAFNQFL---------- 123
I +EI L K+E + G S+ ++ SL LL N
Sbjct: 198 FHGSIPSEIGRLSKMEFFTVVENNLTGIVPPSIYNISSLTLLQFTKNHLQGTLPPNIGFT 257
Query: 124 --------------------SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVN 163
SL+N SSL++++F N F G V D RLK L LN G N
Sbjct: 258 LPNLQSFAGGINNFDGPIPKSLANISSLQILDFPNNNFFGMVPDDIGRLKYLERLNFGSN 317
Query: 164 NLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISST 223
+LGSG +L+FI+ L NC++L L + N F GV+P SIANLS+ + I +G N +S +
Sbjct: 318 SLGSGKVGDLNFISSLVNCTRLRILGLDTNHFGGVVPSSIANLSNQLVAITLGDNMLSGS 377
Query: 224 IPHGIRNLVNLNWLTMESSQLIGT-IPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQ 282
IP GI NL+NL L ME + + G+ IPP IG +L LL +G N L G I SS+GNLT
Sbjct: 378 IPLGITNLINLQVLAMEGNMMNGSSIPPNIGNLKSLVLLYLGRNGLIGPIPSSIGNLTSL 437
Query: 283 TYLF---NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLN 339
T L+ N G IP+SL CKSL+ L +S N L+ T+P++I S+T+LS+ L LD+N
Sbjct: 438 TNLYLSYNKHDGYIPTSLGECKSLVSLELSSNNLSGTIPKEIFSLTSLSITLTLDHNSFT 497
Query: 340 GSLPPEVG------------------------------------------------NLKN 351
GSLP VG LK+
Sbjct: 498 GSLPDGVGGLLSLLQLDLSENKLSGNIPSNLGKCTSMEQLYLGGNQFEGTIPQSFKTLKS 557
Query: 352 LLRLH---------IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLC 402
L++L+ IPE+ L ++LSYN F +VP +G F+N T FSIIGN LC
Sbjct: 558 LVKLNLSHNNLIGPIPEFLCELPSLMYVDLSYNNFVGKVPEEGAFSNSTMFSIIGNNNLC 617
Query: 403 GGLDELHLPSCRYKGSIKPSITSLKVLIPVI--VSCLILLVISFIFYARRKKPAHKDSNM 460
GL ELHLP+C + +S KVLIP+ V+ +++LV F KK + KD +
Sbjct: 618 DGLQELHLPTCMPNDQTR---SSSKVLIPIASAVTSVVILVSIFCLCFLLKK-SRKDIST 673
Query: 461 LSMKQQF-PMISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE 510
S +F P IS+ ELSK+T+ FS N I G F VY VA+KV NL+Q+
Sbjct: 674 SSFANEFLPQISYLELSKSTDGFSMDNLIGSGSFGTVYKGLLSNGGSIVAIKVLNLQQEG 733
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI-----SNGQLRLC------- 558
AS+SF E NAL NIRHRNL+KIIT CSSID G +FKA+ SNG L
Sbjct: 734 ASKSFVDECNALSNIRHRNLLKIITSCSSIDVHGNEFKALVFNFMSNGNLDGWLHPPNQG 793
Query: 559 ----NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
LSL QR+NIAID+A ++YL +HC+ IVH DLKPSNILLD ++V HVGD GLA+
Sbjct: 794 QNQRRLSLIQRLNIAIDIACGLDYLHNHCETPIVHCDLKPSNILLDDNMVAHVGDFGLAR 853
Query: 615 FLYGYEPGTTAETASSSIGINGTVGYVAP 643
F+ + + S+ + G++GY+ P
Sbjct: 854 FMLERSSDQIFFSQTMSLVLKGSIGYIPP 882
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224116466|ref|XP_002331904.1| predicted protein [Populus trichocarpa] gi|222874576|gb|EEF11707.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 301/799 (37%), Positives = 413/799 (51%), Gaps = 177/799 (22%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
+FLR ++L NN F IP +IGRL+ L+ LIL NNSFS IP+N+S SNL+KL+ + NN
Sbjct: 93 SFLRLLSLENNSFTNAIPQEIGRLVRLQTLILGNNSFSGEIPSNISHCSNLLKLNLEGNN 152
Query: 78 LVRDILTEICSLFKLER----------------------LRIDC------GGRIDSLGHL 109
L ++ + SL KL+ + ID GG S+G L
Sbjct: 153 LTGNLPAGLGSLSKLQVFSFRKNNLDGKIPLSFENLSSIIEIDGTLNNIQGGIPSSIGKL 212
Query: 110 K------------------------SLLLLSLAFNQF----------------------- 122
K SL+ SL +NQF
Sbjct: 213 KTLNFFSLGSNNLSGTIPASLYNISSLIHFSLPYNQFHGTLPPNIGLTLPNLQYLGIHDN 272
Query: 123 -------LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDF 175
+L NA+ I S N+F+G V + + NL L++ N LG G ++L F
Sbjct: 273 RLSGQLPATLINATKFTEIYLSYNKFTGKVPT-LAIMPNLRILSMEENGLGKGEDDDLSF 331
Query: 176 INLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLN 235
+ L+N SKLE LY + N F GVLP I+N S+ +KQ+A GSN+I TIP GI NLV+L+
Sbjct: 332 LYTLSNSSKLEDLYIDNNNFGGVLPDIISNFSTKLKQMAFGSNQIRGTIPDGIGNLVSLD 391
Query: 236 WLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLT--LQ-TYLFNNLQGN 292
L +E++ L G+IP IG+ NL + N L GSI SSLGN+T +Q + NNLQG+
Sbjct: 392 TLGLEANHLTGSIPSSIGKLQNLADFFLNENKLSGSIPSSLGNITSLMQINFDQNNLQGS 451
Query: 293 IPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNL--- 349
IP SL NC++LL L++S N L+ +P+++LS+++LS+YL L N L GSLP EVG L
Sbjct: 452 IPPSLGNCQNLLVLALSQNNLSGPIPKEVLSISSLSMYLVLSENQLTGSLPFEVGKLVTL 511
Query: 350 ------KNLLRLHIP--------------------------------------------- 358
KN L IP
Sbjct: 512 GYMDISKNRLSGEIPASLGSCESLEHLYLDGNFLQGPISESLRSLRALQDLNLSHNNLSG 571
Query: 359 EYPENLSFFEL--LNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYK 416
+ P+ L +L L+LS+N EVP GVF N + SI GN LCGG+ +L+LP+CR K
Sbjct: 572 QIPKFLGDLKLQSLDLSFNDLEGEVPMHGVFENTSAVSIAGNKNLCGGILQLNLPTCRSK 631
Query: 417 GSIKPSITSLKVLIPVIVSCL---ILLVISFIFYARRKKPAHKDSNMLSMKQQFPMISHA 473
S KP +S K+ + V + C ++ + SF+F KK K N LS + F +++
Sbjct: 632 -STKPK-SSTKLTLTVAIPCGFIGLIFIASFLFLCCLKKSLRKTKNELSCEMPFRTVAYK 689
Query: 474 ELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRN 524
+L +ATN FS N + G F VY VA+KV NL ++ AS+SF E AL N
Sbjct: 690 DLLQATNGFSSGNLVGAGSFGSVYKGVLAFDGVTVAVKVFNLLREGASKSFMRECAALLN 749
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAIS-----NGQLRLC---------------NLSLTQ 564
IRHRNL+K++ C+ +D +G DFKA+ NG L NL+L Q
Sbjct: 750 IRHRNLVKVLFACAGVDVQGNDFKALVYEFMINGSLEEWLHPIHTLDLEVHQPKNLNLIQ 809
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624
R+NIAIDVA A++YL + C+ IVH DLKPSN+LLD D+ HVGD GL KFL +
Sbjct: 810 RLNIAIDVANALDYLHNQCKMPIVHCDLKPSNVLLDGDMTAHVGDFGLLKFLS-EASCQS 868
Query: 625 AETASSSIGINGTVGYVAP 643
+ + +SS+G+ GTVGY AP
Sbjct: 869 SSSQTSSVGLKGTVGYAAP 887
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255585471|ref|XP_002533428.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223526716|gb|EEF28948.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 286/774 (36%), Positives = 402/774 (51%), Gaps = 153/774 (19%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
+FLR +N+ NN F EIP QIG L LE L L+NNS IP N+S SNL+ +S N
Sbjct: 105 SFLRALNIQNNSFGHEIPQQIGYLRRLEELRLNNNSVGGKIPTNISRCSNLVFISLGKNK 164
Query: 78 LVRDILTE--------ICSLF----------------KLERLRID----CGGRIDSLGHL 109
L ++ E + S+F +L+RL + G +SLG L
Sbjct: 165 LEGNVPEELGVLSNLQVLSIFGNKLTGSIPHSLGNLSQLQRLSLAENRMVGEVPNSLGWL 224
Query: 110 KSLLLLSL-------------------------------------------------AFN 120
++L LSL + N
Sbjct: 225 RNLTFLSLRSNRLSGTIPSSLFNLSSIRNLDIGENNFHGNLPSDIGFLLPNIRWFAISSN 284
Query: 121 QF-----LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDF 175
+F +SLSNA++LE + +N +G V ++L L +L NNLG+G A++L F
Sbjct: 285 EFTGKIPVSLSNATNLESLLLLQNNLTGEVP-SLAKLDRLRVFSLTSNNLGTGKADDLSF 343
Query: 176 INLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLN 235
++ LTN + LE L N N F G+LP SIANLS+T++ + + +NRI +IP GI NLV+L
Sbjct: 344 LHSLTNTTALEELGVNGNNFGGMLPDSIANLSTTLRILLLDNNRIIGSIPSGIENLVSLE 403
Query: 236 WLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLF---NNLQGN 292
+ ++QL G IP IG+ NL +L + N L G I SSLGNLT L NNL G
Sbjct: 404 DFEVWNNQLSGFIPDSIGKLQNLVVLALNSNMLSGHIPSSLGNLTNLIQLLVEDNNLSGR 463
Query: 293 IPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNL 352
IPS L C+++LGLS+S N + ++P +++S+++LS+YL+L N L G+LP EVGNLK+L
Sbjct: 464 IPSDLGRCQNMLGLSLSQNNFSGSIPPEVISISSLSIYLDLSQNNLTGTLPMEVGNLKSL 523
Query: 353 LRLH---------------------------------IPEYPENLSFFELLNLSYNYFGS 379
IP +L ++L+LS N+
Sbjct: 524 SEFDVSGNKLSGEIPRTLGSCISLEILNMAGNNFQGLIPSSLSSLRALQILDLSNNHLSG 583
Query: 380 EVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYKGSIKPSITS-LKVLIPVIVSCLI 438
VP+KG+F N + S+ GN LCGG+ E LP C K +T LK +I I
Sbjct: 584 MVPSKGIFKNASATSVEGNNMLCGGIPEFQLPVCNSARHKKNRLTPVLKTVISAISGMAF 643
Query: 439 LLVISFIFYARRKKPAHKDSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIVYN 498
L+++ ++F+ R+KK ++ +++ +S+ L KAT+ FS AN I G F VY
Sbjct: 644 LILMLYLFWFRQKKVNETTADF--SEKKIMELSYQNLHKATDGFSSANIIGMGSFGSVYK 701
Query: 499 ---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549
+A+KV NL ++ +SF AE ALRNIRHRNL+K++T CSS+D+ G DFKA
Sbjct: 702 GRLDREGTLIAVKVFNLMRRGGFKSFLAECEALRNIRHRNLLKVLTACSSLDYHGNDFKA 761
Query: 550 I--------------------SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
+ + +L L+ QR+NIAIDVA A+ YL HHC+P IVH
Sbjct: 762 LVYEFMVNGSLEEWLHPPVATNEAELETRKLNFLQRLNIAIDVASALYYLHHHCEPQIVH 821
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
DLKPSNILLD+++ HVGD GLA+FL + T SSSIG+ GTVGY P
Sbjct: 822 CDLKPSNILLDEELTGHVGDFGLARFL--LDATQNHYTQSSSIGVRGTVGYAPP 873
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224135241|ref|XP_002327600.1| predicted protein [Populus trichocarpa] gi|222836154|gb|EEE74575.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 282/786 (35%), Positives = 404/786 (51%), Gaps = 167/786 (21%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
+FLR + L NN F IP +I RL+ L+ LIL NNSF+ IPAN+S SNL+ L+ + NN
Sbjct: 71 SFLRLLRLENNSFTNTIPQEIDRLVRLQTLILGNNSFTGEIPANISHCSNLLSLNLEGNN 130
Query: 78 LVRDILTEICSLFKLERLRI---DCGGRI-------------------------DSLGHL 109
L ++ + SL KL+ + GG+I S+G L
Sbjct: 131 LTGNLPAGLGSLSKLQVFSFRKNNLGGKIPPSFENLSSIIEIDGTLNNLQGGIPSSIGKL 190
Query: 110 K------------------------SLLLLSLAFNQF----------------------- 122
K SLL LSLA NQF
Sbjct: 191 KTLSFFSLGSNNLSGTIPLSLYNISSLLHLSLAHNQFHGTLPPNMGLTLPNLQYLGIHDN 250
Query: 123 -------LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDF 175
+L NA+ I S N+F+G V + + NL L++ LG+G ++L F
Sbjct: 251 RLSGLIPATLINATKFTGIYLSYNEFTGKVPT-LASMPNLRVLSMQAIGLGNGEDDDLSF 309
Query: 176 INLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLN 235
+ L+N SKLE L N N F GVLP I+N S+ +KQ+ GSN+I +IP GI NLV+L+
Sbjct: 310 LYTLSNSSKLEALAINENNFGGVLPDIISNFSTKLKQMTFGSNQIRGSIPDGIGNLVSLD 369
Query: 236 WLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLT--LQ-TYLFNNLQGN 292
L +E++ L G+IP IG+ NL + N L G I SSLGN+T +Q + NNLQG+
Sbjct: 370 TLGLEANHLTGSIPSSIGKLQNLADFFLNENKLSGRIPSSLGNITSLMQINFDQNNLQGS 429
Query: 293 IPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYL------------ELDNNLLNG 340
IP SL NC++LL L++S N L+ +P+++LS+++LS+YL ++ N L+G
Sbjct: 430 IPPSLGNCQNLLVLALSQNNLSGPIPKEVLSISSLSMYLVLSENQLTLGYMDISKNRLSG 489
Query: 341 SLPPEVGNLKNLLRL---------------------------------HIPEYPENLSFF 367
+P +G+ ++L L IP++ +
Sbjct: 490 EIPASLGSCESLEHLSLDGNFFQGPISESLRSLRALQDLNLSHNNLTGQIPKFLGDFKLL 549
Query: 368 ELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYKGSIKPSITSLK 427
+ L+LS+N EVP GVF N + SI GN LCGG+ +L+LP+CR K + S T L
Sbjct: 550 QSLDLSFNDLEGEVPMNGVFENTSAISIAGNKNLCGGILQLNLPTCRSKSTKPKSSTKLA 609
Query: 428 VLIPVIVSCL-ILLVISFIFYARRKKPAHKDSNMLSMKQQFPMISHAELSKATNNFSPAN 486
+++ + + ++ + SF+++ KK K N L+ + F +++ +L +ATN FS N
Sbjct: 610 LIVAIPCGFIGLIFITSFLYFCCLKKSLRKTKNDLAREIPFQGVAYKDLRQATNGFSSEN 669
Query: 487 KIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
I G F VY VA+KV NL ++ AS+SF E AL NIRHRNL+K++
Sbjct: 670 LIGAGSFGSVYKGLLASDGVIVAVKVFNLLREGASKSFMRECAALTNIRHRNLVKVLCAY 729
Query: 538 SSIDFEGFDFKAIS-----NGQLRLC---------------NLSLTQRVNIAIDVAFAIE 577
+ +D +G DFKA+ NG L NL+L QR+NIAIDVA A++
Sbjct: 730 AGVDVQGKDFKALVYEFMINGSLEEWLHPNQTLYQEVHEPRNLNLIQRLNIAIDVANALD 789
Query: 578 YLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGT 637
YL +HC+ I H DLKPSN+LLD D+ HVGD GL KFL + A +SS+G+ GT
Sbjct: 790 YLHNHCKTPIAHCDLKPSNVLLDGDMTAHVGDFGLLKFL------SEASCQTSSVGLKGT 843
Query: 638 VGYVAP 643
VGY AP
Sbjct: 844 VGYAAP 849
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356566660|ref|XP_003551548.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 278/772 (36%), Positives = 395/772 (51%), Gaps = 147/772 (19%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSN- 76
TFL +NL N+ F+GE PH++G L L+ + +S NSF +IP+NLS + L LS N
Sbjct: 113 TFLTRLNLRNSSFHGEFPHEVGLLQYLQHINISYNSFGGSIPSNLSHCTELSILSAGHNN 172
Query: 77 -----------------------NLVRDILTEICSLFKLERLRID----CGGRIDSLGHL 109
NL +I EI L +L L ++ G ++ ++
Sbjct: 173 YTGTIPAWIGNSSSLSLLNLAVNNLHGNIPNEIGQLSRLTLLALNGNYLSGTIPGTIFNI 232
Query: 110 KSLLLLSLAFNQFL------------------------------SLSNASSLEMIEFSRN 139
SL +++ N SLSNAS LE+++F+ N
Sbjct: 233 SSLFFFTVSQNHLHGNIPADVGYTFPNLETFAGGVNSFTGTIPESLSNASRLEILDFAEN 292
Query: 140 QFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVL 199
+G + + RL L LN N LG+G A +L+F+ L NC+ L+ L + N F G L
Sbjct: 293 GLTGTLPKNIGRLPLLKRLNFDDNRLGTGKAGDLNFLASLVNCTALKVLGLSDNSFGGEL 352
Query: 200 PHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQ 259
P +IANLS+ + + +G N I ++P GIRNLVNL +L +E + L G +P IG L
Sbjct: 353 PSTIANLSTQLTSLTLGGNGIHGSVPIGIRNLVNLTFLGLEENNLSGFVPHTIGMLRLLN 412
Query: 260 LLNIGGNHLQGSILSSLGNLTLQTYL---FNNLQGNIPSSLANCKSLLGLSVSHNKLTST 316
L++ GN+ G I SS+GNLT T L NN +G+IP++L C+SLL L++SHN L T
Sbjct: 413 GLDLNGNNFSGVIPSSIGNLTRLTRLQMEENNFEGSIPANLGKCQSLLMLNLSHNMLNGT 472
Query: 317 LPQQILSVTTLSLYLELDNNLLNGSLPPEV------------------------------ 346
+P+Q+L++++LS+YL+L +N L G + EV
Sbjct: 473 IPRQVLTLSSLSIYLDLSHNALTGPVLAEVGKLVNLAQLDLSENKLSGMIPSSLGSCIGL 532
Query: 347 -----------GNLKNLLRL----------------HIPEYPENLSFFELLNLSYNYFGS 379
GN+ + +R IPE+ E LNLSYN F
Sbjct: 533 EWIHLQGNFFEGNIPSTMRYLRGLQDIDLSCNNFSGKIPEFLGEFKVLEHLNLSYNDFSG 592
Query: 380 EVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYK-GSIKPSITSLKVLIPVIVS-CL 437
++P G+F N T +S+ GN KLCGG EL LP+C K S KV+I VIV+
Sbjct: 593 KLPMNGIFKNATSYSVYGNSKLCGGAPELDLPACTIKKASSFRKFHDPKVVISVIVALVF 652
Query: 438 ILLVISFIFYARRKKPAHKDSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIVY 497
+LL+ F+ + K+ K S + K IS++E++K T FSP N + G F VY
Sbjct: 653 VLLLFCFLAISMVKRARKKASRSTTTKDLDLQISYSEIAKCTGGFSPDNLVGSGSFGSVY 712
Query: 498 ---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548
+VA+KV NL+Q+ AS+SF E LR+IRHRNL+KIIT SS+D +G DFK
Sbjct: 713 KGTLSSDGSSVAVKVLNLEQRGASKSFIDECQVLRSIRHRNLLKIITAISSVDHQGNDFK 772
Query: 549 A-----------------ISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGD 591
A + N Q + LS QR+NIAIDVA A+EYL H C IVH D
Sbjct: 773 ALVFEFMPNGSLEDWLHPVDNQQKQTKTLSFIQRLNIAIDVACALEYLHHFCHTPIVHCD 832
Query: 592 LKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
+KPSN+LLD D+V HVGD GLA FL+ G+ ++ S + + G++GY+ P
Sbjct: 833 IKPSNVLLDNDMVAHVGDFGLATFLFEESSGSPQQSTMSGV-LKGSIGYIPP 883
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 746 | ||||||
| TAIR|locus:2079157 | 1011 | AT3G47580 [Arabidopsis thalian | 0.709 | 0.523 | 0.286 | 4.1e-69 | |
| UNIPROTKB|Q40640 | 1025 | Xa21 "Receptor kinase-like pro | 0.667 | 0.485 | 0.316 | 2.4e-67 | |
| TAIR|locus:2149922 | 1031 | EFR "EF-TU receptor" [Arabidop | 0.453 | 0.327 | 0.349 | 5.7e-59 | |
| TAIR|locus:2075631 | 1009 | AT3G47090 [Arabidopsis thalian | 0.534 | 0.395 | 0.314 | 1.7e-58 | |
| TAIR|locus:2079142 | 1010 | AT3G47570 [Arabidopsis thalian | 0.548 | 0.404 | 0.316 | 2.8e-58 | |
| TAIR|locus:2075661 | 1025 | AT3G47110 [Arabidopsis thalian | 0.5 | 0.363 | 0.325 | 1.4e-57 | |
| TAIR|locus:2170483 | 1173 | FLS2 "FLAGELLIN-SENSITIVE 2" [ | 0.654 | 0.416 | 0.279 | 3.8e-52 | |
| UNIPROTKB|O24435 | 813 | O24435 "Receptor kinase-like p | 0.679 | 0.623 | 0.303 | 6.3e-52 | |
| TAIR|locus:2046525 | 1124 | AT2G33170 [Arabidopsis thalian | 0.497 | 0.330 | 0.276 | 1.9e-39 | |
| TAIR|locus:2160791 | 1102 | AT5G63930 [Arabidopsis thalian | 0.660 | 0.447 | 0.262 | 2.9e-43 |
| TAIR|locus:2079157 AT3G47580 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 527 (190.6 bits), Expect = 4.1e-69, Sum P(2) = 4.1e-69
Identities = 167/583 (28%), Positives = 278/583 (47%)
Query: 2 SSNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLI-SLERLILSNNSFSCAIPA 60
S N P + L + L +GF+G + G L+ ++ L L N AIP
Sbjct: 218 SMNKFFGVFPPAIYNLSALEDLFLFGSGFSGSLKPDFGNLLPNIRELNLGENDLVGAIPT 277
Query: 61 NLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDXXXXXXXXXXXXXXXX 120
LS+ S L K + N + I + L+ L +
Sbjct: 278 TLSNISTLQKFGINKNMMTGGIYPNFGKVPSLQYLDLS---------ENPLGSYTFGDLE 328
Query: 121 XXXXXXNASSLEMIEFSRNQFSGGVSVDFSRLKN-LSWLNLGVNNLGSGTANELDFINLL 179
N + L+++ + G + + + L LNL + N G+ + D NL+
Sbjct: 329 FIDSLTNCTHLQLLSVGYTRLGGALPTSIANMSTELISLNL-IGNHFFGSIPQ-DIGNLI 386
Query: 180 TNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTM 239
L+RL +N G LP S+ L + +++ SNR+S IP I NL L L +
Sbjct: 387 G----LQRLQLGKNMLTGPLPTSLGKLLR-LGLLSLYSNRMSGEIPSFIGNLTQLEILYL 441
Query: 240 ESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSI------LSSLGNLTLQTYLFNNLQGNI 293
++ G +PP +G+ ++ L IG N L G+I + +L NL+++ N+L G++
Sbjct: 442 SNNSFEGIVPPSLGKCSHMLDLRIGYNKLNGTIPKEIMQIPTLVNLSMEG---NSLSGSL 498
Query: 294 PSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTXXXXXXXXXXXXXGSLPPEVGNL---- 349
P+ + + ++L+ LS+ +NK + LPQ L G++P G +
Sbjct: 499 PNDIGSLQNLVKLSLENNKFSGHLPQT-LGNCLAMEQLFLQGNSFDGAIPNIRGLMGVRR 557
Query: 350 ----KNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGL 405
N L IPEY N S E LNLS N F +VP+KG F N T + GN LCGG+
Sbjct: 558 VDLSNNDLSGSIPEYFANFSKLEYLNLSINNFTGKVPSKGNFQNSTIVFVFGNKNLCGGI 617
Query: 406 DELHLPSC-RYKGSIKPSITS-LK---VLIPVIVSCLILLVIS--FIFYARRKKPAHKDS 458
+L L C + ++ +S LK +L+ + ++ L+LLVI+ + + R+++ + +
Sbjct: 618 KDLKLKPCLAQEPPVETKHSSHLKKVAILVSIGIALLLLLVIASMVLCWFRKRRKNQQTN 677
Query: 459 NMLSMKQQF--PMISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLK 507
N++ K + IS+ +L ATN FS +N + G F V+ VA+KV N++
Sbjct: 678 NLVPSKLEIFHEKISYGDLRNATNGFSSSNMVGSGSFGTVFKALLPTESKIVAVKVLNMQ 737
Query: 508 QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550
++ A +SF AE +L++ RHRNL+K++T C+S DF+G +F+A+
Sbjct: 738 RRGAMKSFMAECESLKDTRHRNLVKLLTACASTDFQGNEFRAL 780
|
|
| UNIPROTKB|Q40640 Xa21 "Receptor kinase-like protein" [Oryza sativa (taxid:4530)] | Back alignment and assigned GO terms |
|---|
Score = 516 (186.7 bits), Expect = 2.4e-67, Sum P(2) = 2.4e-67
Identities = 180/568 (31%), Positives = 269/568 (47%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLI-LSNNSFSCAIPANLSSGSNLIKLSTDSNNL 78
LR ++ N G IP + + L +I + N F IPA++++ S+L + NL
Sbjct: 250 LRAFSVRENKLGGMIPTNAFKTLHLLEVIDMGTNRFHGKIPASVANASHLTVIQI-YGNL 308
Query: 79 VRDI----------LTEIC---SLFKLERLRIDCGGRIDXXXXXXXXXXXXXXXXXXXXX 125
I LTE+ +LF+ R + D G D
Sbjct: 309 FSGIITSGFGRLRNLTELYLWRNLFQT-REQDDWGFISDLTNCSKLQTLNLGENNLGGVL 367
Query: 126 XNA-----SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLT 180
N+ +SL + N+ +G + D L L L L NN + L L
Sbjct: 368 PNSFSNLSTSLSFLALELNKITGSIPKDIGNLIGLQHLYLCNNNFRGSLPSSL---GRLK 424
Query: 181 NCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTME 240
N L L + N G +P +I NL+ + + +G+N+ S IP+ + NL NL L +
Sbjct: 425 NLGIL--LAYENN-LSGSIPLAIGNLTE-LNILLLGTNKFSGWIPYTLSNLTNLLSLGLS 480
Query: 241 SSQLIGTIPPLIGETPNLQLL-NIGGNHLQGSILSSLGNLT--LQTYLFNN-LQGNIPSS 296
++ L G IP + L ++ N+ N+L+GSI +G+L ++ + +N L G IP++
Sbjct: 481 TNNLSGPIPSELFNIQTLSIMINVSKNNLEGSIPQEIGHLKNLVEFHAESNRLSGKIPNT 540
Query: 297 LANCKSLLGLSVSHNKLTSTLPQQILSVTTXXXXXXXXXXXXXGSLPPEVGNLKNLLRLH 356
L +C+ L L + +N L+ ++P L G +P +L ++ LH
Sbjct: 541 LGDCQLLRYLYLQNNLLSGSIPSA-LGQLKGLETLDLSSNNLSGQIPT---SLADITMLH 596
Query: 357 IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSC--- 413
LNLS+N F EVPT G F + SI GN KLCGG+ +LHLP C
Sbjct: 597 S------------LNLSFNSFVGEVPTIGAFAAASGISIQGNAKLCGGIPDLHLPRCCPL 644
Query: 414 ---RYKGSIKPSITSLKVLIPVIVSCLILLVISFIFYARRKKPAHKDSNMLSMKQQFPMI 470
R + P SL + I+S L LL+ ++ R KK A + SMK P++
Sbjct: 645 LENRKHFPVLPISVSLAAAL-AILSSLYLLIT---WHKRTKKGA---PSRTSMKGH-PLV 696
Query: 471 SHAELSKATNNFSPANKIREGGFNIVY--------NVAMKVANLKQKEASRSFAAEFNAL 522
S+++L KAT+ F+P N + G F VY +VA+KV L+ +A +SF AE AL
Sbjct: 697 SYSQLVKATDGFAPTNLLGSGSFGSVYKGKLNIQDHVAVKVLKLENPKALKSFTAECEAL 756
Query: 523 RNIRHRNLIKIITICSSIDFEGFDFKAI 550
RN+RHRNL+KI+TICSSID G DFKAI
Sbjct: 757 RNMRHRNLVKIVTICSSIDNRGNDFKAI 784
|
|
| TAIR|locus:2149922 EFR "EF-TU receptor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 5.7e-59, Sum P(2) = 5.7e-59
Identities = 125/358 (34%), Positives = 184/358 (51%)
Query: 2 SSNNLL-QYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPA 60
S NNL + L L T L+ ++ N GEIP ++ RL + ++ NSFS P
Sbjct: 177 SKNNLTGNFPASLGNL-TSLQKLDFAYNQMRGEIPDEVARLTQMVFFQIALNSFSGGFPP 235
Query: 61 NLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDXXXXXXXXXXXXXXXX 120
L + S+L LS N+ ++ + L L LR R+
Sbjct: 236 ALYNISSLESLSLADNSFSGNLRADFGYL--LPNLR-----RL-------LLGTNQFTGA 281
Query: 121 XXXXXXNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLT 180
N SSLE + S N SG + + F +L+NL WL + N+LG+ +++ L+FI +
Sbjct: 282 IPKTLANISSLERFDISSNYLSGSIPLSFGKLRNLWWLGIRNNSLGNNSSSGLEFIGAVA 341
Query: 181 NCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTME 240
NC++LE L N G LP SIANLS+T+ + +G N IS TIPH I NLV+L L++E
Sbjct: 342 NCTQLEYLDVGYNRLGGELPASIANLSTTLTSLFLGQNLISGTIPHDIGNLVSLQELSLE 401
Query: 241 SSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLT-LQT-YL-FNNLQGNIPSSL 297
++ L G +P G+ NLQ++++ N + G I S GN+T LQ +L N+ G IP SL
Sbjct: 402 TNMLSGELPVSFGKLLNLQVVDLYSNAISGEIPSYFGNMTRLQKLHLNSNSFHGRIPQSL 461
Query: 298 ANCKSLLGLSVSHNKLTSTLPQQILSVTTXXXXXXXXXXXXXGSLPPEVGNLKNLLRL 355
C+ LL L + N+L T+PQ+IL + + G P EVG L+ L+ L
Sbjct: 462 GRCRYLLDLWMDTNRLNGTIPQEILQIPSLAYIDLSNNFLT-GHFPEEVGKLELLVGL 518
|
|
| TAIR|locus:2075631 AT3G47090 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 454 (164.9 bits), Expect = 1.7e-58, Sum P(2) = 1.7e-58
Identities = 139/442 (31%), Positives = 215/442 (48%)
Query: 128 ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLER 187
++ L ++ N G + D L L L L +NL +G L N L
Sbjct: 361 STELTVLNLKGNLIYGSIPHDIGNLIGLQSLLLA-DNLLTGPLP-----TSLGNLVGLGE 414
Query: 188 LYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGT 247
L N F G +P I NL+ +K + + +N +P + + ++ L + ++L GT
Sbjct: 415 LILFSNRFSGEIPSFIGNLTQLVK-LYLSNNSFEGIVPPSLGDCSHMLDLQIGYNKLNGT 473
Query: 248 IPPLIGETPNLQLLNIGGNHLQGSILSSLGNL-TLQTYLF--NNLQGNIPSSLANCKSLL 304
IP I + P L LN+ N L GS+ + +G L L L NNL G++P +L C S+
Sbjct: 474 IPKEIMQIPTLVHLNMESNSLSGSLPNDIGRLQNLVELLLGNNNLSGHLPQTLGKCLSME 533
Query: 305 GLSVSHNKLTSTLPQQILSVTTXXXXXXXXXXXXXGSLPPEVGNLKNLLRLHIPEYPENL 364
+ + N T+P G ++ N N L I EY EN
Sbjct: 534 VIYLQENHFDGTIPD---------------IKGLMGVKNVDLSN--NNLSGSISEYFENF 576
Query: 365 SFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYKGS-IKPSI 423
S E LNLS N F VPT+G+F N T S+ GN LCG + EL L C + ++
Sbjct: 577 SKLEYLNLSDNNFEGRVPTEGIFQNATLVSVFGNKNLCGSIKELKLKPCIAQAPPVETRH 636
Query: 424 TSL--KVLIPVIVSC---LILLVISFIFYARRKKPAH-KDSNMLSMKQQFPMISHAELSK 477
SL KV I V V L+L ++S ++ +RK +S +++ +S+ +L
Sbjct: 637 PSLLKKVAIGVSVGIALLLLLFIVSLSWFKKRKNNQKINNSAPFTLEIFHEKLSYGDLRN 696
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHR 528
AT+ FS +N + G F V+ VA+KV N++++ A +SF AE +L++IRHR
Sbjct: 697 ATDGFSSSNIVGSGSFGTVFKALLQTENKIVAVKVLNMQRRGAMKSFMAECESLKDIRHR 756
Query: 529 NLIKIITICSSIDFEGFDFKAI 550
NL+K++T C+SIDF+G +F+A+
Sbjct: 757 NLVKLLTACASIDFQGNEFRAL 778
|
|
| TAIR|locus:2079142 AT3G47570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 2.8e-58, Sum P(2) = 2.8e-58
Identities = 139/439 (31%), Positives = 213/439 (48%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
T L +NL N G++P +G L LE+L LS+N+ IP++++ + + L +NN
Sbjct: 162 TNLVQLNLYGNNMRGKLPTSLGNLTLLEQLALSHNNLEGEIPSDVAQLTQIWSLQLVANN 221
Query: 78 ---LVRDILTEICSLFKLE--------RLRIDCGGRIDXXXXXXXXXXXXXXXXXXXXXX 126
+ L + SL L RLR D G +
Sbjct: 222 FSGVFPPALYNLSSLKLLGIGYNHFSGRLRPDLGILLPNLLSFNMGGNYFTGSIPTTLS- 280
Query: 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
N S+LE + + N +G + F + NL L L N+LGS ++ +L+F+ LTNC++LE
Sbjct: 281 NISTLERLGMNENNLTGSIPT-FGNVPNLKLLFLHTNSLGSDSSRDLEFLTSLTNCTQLE 339
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246
L RN G LP SIANLS+ + + +G IS +IP+ I NL+NL L ++ + L G
Sbjct: 340 TLGIGRNRLGGDLPISIANLSAKLVTLDLGGTLISGSIPYDIGNLINLQKLILDQNMLSG 399
Query: 247 TIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLT-LQTY-LFNN-LQGNIPSSLANCKSL 303
+P +G+ NL+ L++ N L G I + +GN+T L+T L NN +G +P+SL NC L
Sbjct: 400 PLPTSLGKLLNLRYLSLFSNRLSGGIPAFIGNMTMLETLDLSNNGFEGIVPTSLGNCSHL 459
Query: 304 LGLSVSHNKLTSTLPQQILSVTTXXXXXXXXXXXXXGSLPPEVGNLKNL--LRL------ 355
L L + NKL T+P +I+ + GSLP ++G L+NL L L
Sbjct: 460 LELWIGDNKLNGTIPLEIMKIQQLLRLDMSGNSLI-GSLPQDIGALQNLGTLSLGDNKLS 518
Query: 356 -HIPEYPENLSFFELLNLSYNYFGSEVPT-KGVFNNKTRFSIIGNGKLCGGLDELHLPSC 413
+P+ N E L L N F ++P KG+ K + N L G + E + S
Sbjct: 519 GKLPQTLGNCLTMESLFLEGNLFYGDIPDLKGLVGVKE--VDLSNNDLSGSIPE-YFASF 575
Query: 414 RYKGSIKPSITSLKVLIPV 432
+ S +L+ +PV
Sbjct: 576 SKLEYLNLSFNNLEGKVPV 594
|
|
| TAIR|locus:2075661 AT3G47110 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 456 (165.6 bits), Expect = 1.4e-57, Sum P(2) = 1.4e-57
Identities = 131/403 (32%), Positives = 199/403 (49%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
T L+ ++ + N GEIP I RL + ++ N F+ P + + S+LI LS N+
Sbjct: 201 TSLQMLDFIYNQIEGEIPGDIARLKQMIFFRIALNKFNGVFPPPIYNLSSLIFLSITGNS 260
Query: 78 LVRDILTEICSLFKLERLRIDCGGRIDXXXXXXXXXXXXXXXXXXXXXXNASSLEMIEFS 137
+ + SL L L+I G N SSL ++
Sbjct: 261 FSGTLRPDFGSL--LPNLQILYMG------------INSFTGTIPETLSNISSLRQLDIP 306
Query: 138 RNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG 197
N +G + + F RL+NL L L N+LG+ ++ +LDF+ LTNCS+L+ L N G
Sbjct: 307 SNHLTGKIPLSFGRLQNLLLLGLNNNSLGNYSSGDLDFLGALTNCSQLQYLNVGFNKLGG 366
Query: 198 VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257
LP IANLS+ + ++++G N IS +IPHGI NLV+L L + + L G +PP +GE
Sbjct: 367 QLPVFIANLSTQLTELSLGGNLISGSIPHGIGNLVSLQTLDLGENLLTGKLPPSLGELSE 426
Query: 258 LQLLNIGGNHLQGSILSSLGNLTLQTYLF---NNLQGNIPSSLANCKSLLGLSVSHNKLT 314
L+ + + N L G I SSLGN++ TYL+ N+ +G+IPSSL +C LL L++ NKL
Sbjct: 427 LRKVLLYSNGLSGEIPSSLGNISGLTYLYLLNNSFEGSIPSSLGSCSYLLDLNLGTNKLN 486
Query: 315 STLPQQILSVTTXXXXXXXXXXXXXGSLPPEVGNLKNLLRL---------HIPEYPENLS 365
++P +++ + + G L ++G LK LL L IP+ N
Sbjct: 487 GSIPHELMELPSLVVLNVSFNLLV-GPLRQDIGKLKFLLALDVSYNKLSGQIPQTLANCL 545
Query: 366 FFELLNLSYNYFGSEVPT-KGVFNNKTRFSIIGNGKLCGGLDE 407
E L L N F +P +G+ RF + L G + E
Sbjct: 546 SLEFLLLQGNSFVGPIPDIRGLTG--LRFLDLSKNNLSGTIPE 586
|
|
| TAIR|locus:2170483 FLS2 "FLAGELLIN-SENSITIVE 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 401 (146.2 bits), Expect = 3.8e-52, Sum P(2) = 3.8e-52
Identities = 151/541 (27%), Positives = 238/541 (43%)
Query: 1 NSSNNLLQYSKPLCILR-TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIP 59
++ +NLL P I T L+ ++L +N GEIP GR+ +L + + N F+ IP
Sbjct: 390 SAHDNLLTGPIPSSISNCTGLKLLDLSHNQMTGEIPRGFGRM-NLTFISIGRNHFTGEIP 448
Query: 60 ANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDXXXXXXXXXXXXXXX 119
++ + SNL LS NNL + I KL++LRI
Sbjct: 449 DDIFNCSNLETLSVADNNLTGTLKPLIG---KLQKLRI------------LQVSYNSLTG 493
Query: 120 XXXXXXXNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLL 179
N L ++ N F+G + + S L L L + N+L E+ + LL
Sbjct: 494 PIPREIGNLKDLNILYLHSNGFTGRIPREMSNLTLLQGLRMYSNDLEGPIPEEMFDMKLL 553
Query: 180 TNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTM 239
S L+ + N F G +P + L S + +++ N+ + +IP +++L LN +
Sbjct: 554 ---SVLD---LSNNKFSGQIPALFSKLES-LTYLSLQGNKFNGSIPASLKSLSLLNTFDI 606
Query: 240 ESSQLIGTIP-PLIGETPNLQL-LNIGGNHLQGSILSSLGNLTL--QTYLFNNL-QGNIP 294
+ L GTIP L+ N+QL LN N L G+I LG L + + L NNL G+IP
Sbjct: 607 SDNLLTGTIPGELLASLKNMQLYLNFSNNLLTGTIPKELGKLEMVQEIDLSNNLFSGSIP 666
Query: 295 SSLANCKSLLGLSVSHNKLTSTLPQQILSVTTXXXXXXXXXXXXXGSLPPEVGNLKNLLR 354
SL CK++ L S N L+ +P ++ G +P GN+ +L+
Sbjct: 667 RSLQACKNVFTLDFSQNNLSGHIPDEVFQGMDMIISLNLSRNSFSGEIPQSFGNMTHLVS 726
Query: 355 L---------HIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGL 405
L IPE NLS + L L+ N VP GVF N ++GN LCG
Sbjct: 727 LDLSSNNLTGEIPESLANLSTLKHLKLASNNLKGHVPESGVFKNINASDLMGNTDLCGSK 786
Query: 406 DELHLPSCRYKGS--IKPSITSLKVLIPVIVSCLILLVISFIFYARRKKPAHKDSNMLSM 463
L + + K S K + L +L L+LL++ + ++K+ ++S+ S+
Sbjct: 787 KPLKPCTIKQKSSHFSKRTRVILIILGSAAALLLVLLLVLILTCCKKKEKKIENSSESSL 846
Query: 464 KQ-----QFPMISHAELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKE 510
+ EL +AT++F+ AN I + VY +A+KV NLK+
Sbjct: 847 PDLDSALKLKRFEPKELEQATDSFNSANIIGSSSLSTVYKGQLEDGTVIAVKVLNLKEFS 906
Query: 511 A 511
A
Sbjct: 907 A 907
|
|
| UNIPROTKB|O24435 O24435 "Receptor kinase-like protein" [Oryza sativa (taxid:4530)] | Back alignment and assigned GO terms |
|---|
Score = 542 (195.9 bits), Expect = 6.3e-52, P = 6.3e-52
Identities = 172/566 (30%), Positives = 268/566 (47%)
Query: 20 LRYINLVNNGFNGEIP-HQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNL 78
L +++N +G +P + L SL+ + + N F IPA++ + SN+ + N+
Sbjct: 224 LTIFEVISNKLSGTLPTNAFSNLPSLQEVYMYYNQFHGRIPASIGNASNISIFTIGLNSF 283
Query: 79 VRDILTEICSLFKLERLRIDCGGRIDXXXXXXXXXXXXXXXXXXXXXXNASSLEMIEFSR 138
+ EI + L+RL + N S+L+ +E
Sbjct: 284 SGVVPPEIGRMRNLQRLELP---------ETLSEAEETNDWKFMTALTNCSNLQEVELGG 334
Query: 139 NQFSGGVSVDFSRLKNLSWLNLGV-NNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG 197
+F G + S L + S ++L + +N SG+ D NL+ L+ L N G
Sbjct: 335 CKFGGVLPDSVSNLSS-SLVSLSIRDNKISGSLPR-DIGNLVN----LQYLSLANNSLTG 388
Query: 198 VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257
LP S + L + ++++ + +N++ ++P I NL L + ++ + GTIP +G
Sbjct: 389 SLPSSFSKLKN-LRRLTVDNNKLIGSLPLTIGNLTQLTNMEVQFNAFGGTIPSTLGNLTK 447
Query: 258 LQLLNIGGNHLQGSILSSLGNL-TLQTYL---FNNLQGNIPSSLANCKSLLGLSVSHNKL 313
L +N+G N+ G I + ++ L L NNL+G+IP + K+++ NKL
Sbjct: 448 LFQINLGHNNFIGQIPIEIFSIPALSEILDVSHNNLEGSIPKEIGKLKNIVEFHADSNKL 507
Query: 314 TSTLPQQILSVTTXXXXXXXXXXXXXGSLPPEVGNLKNLLRLHIP------EYPENLSFF 367
+ P I GS+P + LK L L + + P +L
Sbjct: 508 SGENPSTI-GECQLLQHLFLQNNFLNGSIPIALTQLKGLDTLDLSGNNLSGQIPMSLGDM 566
Query: 368 ELL---NLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYKGSIKPSIT 424
LL NLS+N F EVPT GVF N + I GN +CGG+ ELHLP+C K K
Sbjct: 567 PLLHSLNLSFNSFHGEVPTNGVFANASEIYIQGNAHICGGIPELHLPTCSLKSRKKKKH- 625
Query: 425 SLKVLIPVIVSCLI--LLVISFIF-----YARRKKPAHKDSNMLSMKQQFPMISHAELSK 477
++L+ V+V CL+ L V S ++ + RRKK ++M Q PMI++ +L K
Sbjct: 626 --QILLLVVVICLVSTLAVFSLLYMLLTCHKRRKKEVPATTSM----QGHPMITYKQLVK 679
Query: 478 ATNNFSPANKIREGGFNIVYN-------------VAMKVANLKQKEASRSFAAEFNALRN 524
AT+ FS ++ + G F VY VA++V L+ +A +SF AE LRN
Sbjct: 680 ATDGFSSSHLLGSGSFGSVYKGEFDSQDGEITSLVAVRVLKLETPKALKSFTAECETLRN 739
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAI 550
RHRNL+KI+TICSSID G DFKAI
Sbjct: 740 TRHRNLVKIVTICSSIDNRGNDFKAI 765
|
|
| TAIR|locus:2046525 AT2G33170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 320 (117.7 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 111/401 (27%), Positives = 181/401 (45%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
L+ + L N +GE+P +IG L+ L+ +IL N FS IP ++ + ++L L+ N+LV
Sbjct: 231 LKLLGLAQNFISGELPKEIGMLVKLQEVILWQNKFSGFIPKDIGNLTSLETLALYGNSLV 290
Query: 80 RDILTEICSLFKLERLRI---DCGGRIDXXXXXXXXXXXXXXXXXXXXX------XNASS 130
I +EI ++ L++L + G I S
Sbjct: 291 GPIPSEIGNMKSLKKLYLYQNQLNGTIPKELGKLSKVMEIDFSENLLSGEIPVELSKISE 350
Query: 131 LEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYF 190
L ++ +N+ +G + + S+L+NL+ L+L +N+L +G F NL T+ +L+ +
Sbjct: 351 LRLLYLFQNKLTGIIPNELSKLRNLAKLDLSINSL-TGPIPP-GFQNL-TSMRQLQLFH- 406
Query: 191 NRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP 250
N GV+P + L S + + N++S IP I NL L + S+++ G IPP
Sbjct: 407 --NSLSGVIPQGLG-LYSPLWVVDFSENQLSGKIPPFICQQSNLILLNLGSNRIFGNIPP 463
Query: 251 LIGETPNLQLLNIGGNHLQGSI---LSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLS 307
+ +L L + GN L G L L NL+ N G +P + C+ L L
Sbjct: 464 GVLRCKSLLQLRVVGNRLTGQFPTELCKLVNLSAIELDQNRFSGPLPPEIGTCQKLQRLH 523
Query: 308 VSHNKLTSTLPQQILSVTTXXXXXXXXXXXXXGSLPPEVGNLKNLLRLHIPEY------- 360
++ N+ +S LP +I S + G +P E+ N K L RL +
Sbjct: 524 LAANQFSSNLPNEI-SKLSNLVTFNVSSNSLTGPIPSEIANCKMLQRLDLSRNSFIGSLP 582
Query: 361 PE--NLSFFELLNLSYNYFGSEVP-TKGVFNNKTRFSIIGN 398
PE +L E+L LS N F +P T G + T + GN
Sbjct: 583 PELGSLHQLEILRLSENRFSGNIPFTIGNLTHLTELQMGGN 623
|
|
| TAIR|locus:2160791 AT5G63930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 335 (123.0 bits), Expect = 2.9e-43, Sum P(2) = 2.9e-43
Identities = 147/561 (26%), Positives = 230/561 (40%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
L + L N G IP ++ L +L +L LS N+ + IP L L N+L
Sbjct: 339 LELLYLFENQLTGTIPVELSTLKNLSKLDLSINALTGPIPLGFQYLRGLFMLQLFQNSLS 398
Query: 80 RDILTEI---CSLFKLERLRIDCGGRIDXXXXXXXXXXXXXXXXXXXXX------XNASS 130
I ++ L+ L+ GRI +
Sbjct: 399 GTIPPKLGWYSDLWVLDMSDNHLSGRIPSYLCLHSNMIILNLGTNNLSGNIPTGITTCKT 458
Query: 131 LEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYF 190
L + +RN G + + N++ + LG N E+ NCS L+RL
Sbjct: 459 LVQLRLARNNLVGRFPSNLCKQVNVTAIELGQNRFRGSIPREVG------NCSALQRLQL 512
Query: 191 NRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP 250
NGF G LP I LS + + + SN+++ +P I N L L M + GT+P
Sbjct: 513 ADNGFTGELPREIGMLSQ-LGTLNISSNKLTGEVPSEIFNCKMLQRLDMCCNNFSGTLPS 571
Query: 251 LIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLF--NNL-QGNIPSSLANCKSL-LGL 306
+G L+LL + N+L G+I +LGNL+ T L NL G+IP L + L + L
Sbjct: 572 EVGSLYQLELLKLSNNNLSGTIPVALGNLSRLTELQMGGNLFNGSIPRELGSLTGLQIAL 631
Query: 307 SVSHNKLTSTLPQQILSVTTXXXXXXXXXXXXXGSLPPEVGNLKNLLRLHIPEYPENLSF 366
++S+NKLT +P + LS G +P NL +LL Y
Sbjct: 632 NLSYNKLTGEIPPE-LSNLVMLEFLLLNNNNLSGEIPSSFANLSSLLG-----Y------ 679
Query: 367 FELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGG-LDEL--HLPSCRYKGSIKPS- 422
N SYN +P + N + S IGN LCG L++ P + + KP
Sbjct: 680 ----NFSYNSLTGPIP---LLRNISMSSFIGNEGLCGPPLNQCIQTQPFAPSQSTGKPGG 732
Query: 423 ITSLKVLI--PVIVSCLILLVISFIFYARRKK-----PAHKDS--NMLSMKQQFPM---I 470
+ S K++ ++ + L++I+ I Y R+ + +D + +S+ FP
Sbjct: 733 MRSSKIIAITAAVIGGVSLMLIALIVYLMRRPVRTVASSAQDGQPSEMSLDIYFPPKEGF 792
Query: 471 SHAELSKATNNFSPANKIREGGFNIVYNVAM---------KVANLKQ----KEASRSFAA 517
+ +L AT+NF + + G VY + K+A+ + SF A
Sbjct: 793 TFQDLVAATDNFDESFVVGRGACGTVYKAVLPAGYTLAVKKLASNHEGGNNNNVDNSFRA 852
Query: 518 EFNALRNIRHRNLIKIITICS 538
E L NIRHRN++K+ C+
Sbjct: 853 EILTLGNIRHRNIVKLHGFCN 873
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.7.11 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 746 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-41 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-34 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-28 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 1e-18 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-17 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 2e-15 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 5e-15 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 3e-14 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-12 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 9e-12 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 6e-11 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-10 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 1e-09 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 2e-09 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 4e-09 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 5e-09 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 6e-09 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 7e-09 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 1e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-07 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-07 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 1e-07 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 3e-07 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 4e-07 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 4e-07 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-07 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 7e-07 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 7e-07 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 9e-07 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 1e-06 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-06 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 2e-06 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 3e-06 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 3e-06 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 3e-06 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 4e-06 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 4e-06 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 4e-06 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 5e-06 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 9e-06 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-05 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 1e-05 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 1e-05 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 1e-05 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 2e-05 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-05 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 3e-05 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 4e-05 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 4e-05 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 5e-05 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 5e-05 | |
| COG3173 | 321 | COG3173, COG3173, Predicted aminoglycoside phospho | 5e-05 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 5e-05 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 5e-05 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 6e-05 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 7e-05 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 7e-05 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 1e-04 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 1e-04 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 1e-04 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 1e-04 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 2e-04 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 2e-04 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 2e-04 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 2e-04 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 2e-04 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 2e-04 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 2e-04 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 2e-04 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 2e-04 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 3e-04 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 3e-04 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 3e-04 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 3e-04 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 3e-04 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 4e-04 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 6e-04 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 6e-04 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 6e-04 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 6e-04 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 6e-04 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 6e-04 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 7e-04 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 7e-04 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 9e-04 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 9e-04 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 0.001 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 0.001 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 0.001 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 0.001 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 0.001 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 0.001 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 0.001 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 0.001 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 0.001 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 0.001 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 0.001 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 0.002 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 0.002 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 0.002 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 0.002 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 0.002 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 0.003 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 0.003 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 0.003 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 0.003 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 0.003 | |
| PHA02882 | 294 | PHA02882, PHA02882, putative serine/threonine kina | 0.003 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 0.003 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 0.003 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 0.003 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 0.003 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 0.004 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 0.004 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 0.004 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 0.004 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 0.004 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 0.004 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 0.004 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 162 bits (412), Expect = 2e-41
Identities = 162/637 (25%), Positives = 274/637 (43%), Gaps = 109/637 (17%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
T L +++LV N G IP +G L +L+ L L N S IP ++ S LI L N+
Sbjct: 236 TSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNS 295
Query: 78 LVRDILTEICSLFKLERLRIDCGGRIDSL-GHLKSLLLLSLAFNQF-----LSLSNASSL 131
L G I L L++L +L L N F ++L++ L
Sbjct: 296 L---------------------SGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRL 334
Query: 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFN 191
++++ N+FSG + + + NL+ L+L NNL +G E L + L +L
Sbjct: 335 QVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNL-TGEIPE-----GLCSSGNLFKLILF 388
Query: 192 RNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPL 251
N EG +P S+ S ++++ + N S +P L + +L + ++ L G I
Sbjct: 389 SNSLEGEIPKSLGACRS-LRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSR 447
Query: 252 IGETPNLQLLNIGGNHLQGSILSSLG-----NLTLQTYLF-------------------- 286
+ P+LQ+L++ N G + S G NL L F
Sbjct: 448 KWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLS 507
Query: 287 -NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPE 345
N L G IP L++CK L+ L +SHN+L+ +P + LS L+L N L+G +P
Sbjct: 508 ENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQ-LDLSQNQLSGEIPKN 566
Query: 346 VGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGL 405
+GN+++L++ +N+S+N+ +P+ G F ++ GN LCGG
Sbjct: 567 LGNVESLVQ---------------VNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGD 611
Query: 406 DELHLPSCRYKGSIKPSITSLKVLIPVIVSCLILLVISFIFYARR-------KKPAHKDS 458
LP C+ ++ + + + + + L+L +++F F R K+ ++D
Sbjct: 612 TTSGLPPCK---RVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDG 668
Query: 459 N----------MLSMKQQFPMISHAE---LSKATNNFSPANKIREGGFNIVYNVAMKVAN 505
S+ + S E +S+ S K + G V V +
Sbjct: 669 TWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS 728
Query: 506 LKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCNLSLT 563
+ S A+ ++H N++K+I +C S + I L L NLS
Sbjct: 729 I-----PSSEIADM---GKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLSWE 780
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD 600
+R IAI +A A+ +L C P++V G+L P I++D
Sbjct: 781 RRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID 817
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 139 bits (353), Expect = 4e-34
Identities = 119/395 (30%), Positives = 180/395 (45%), Gaps = 50/395 (12%)
Query: 19 FLRYINLVNNGFNGEIPHQIGRLI-SLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
+++ INL NN +G IP I SL L LSNN+F+ +IP S NL L +N
Sbjct: 94 YIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNM 151
Query: 78 LVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFS 137
L +I +I S L+ L D GG + +G + SL+N +SLE + +
Sbjct: 152 LSGEIPNDIGSFSSLKVL--DLGGNV-LVGKIP------------NSLTNLTSLEFLTLA 196
Query: 138 RNQFSGGVSVDFSRLKNLSWLNLGVNNLGSG---------TANELDFI--NL-------L 179
NQ G + + ++K+L W+ LG NNL + N LD + NL L
Sbjct: 197 SNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSL 256
Query: 180 TNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTM 239
N L+ L+ +N G +P SI +L I + + N +S IP + L NL L +
Sbjct: 257 GNLKNLQYLFLYQNKLSGPIPPSIFSLQKLI-SLDLSDNSLSGEIPELVIQLQNLEILHL 315
Query: 240 ESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLG---NLTLQTYLFNNLQGNIPSS 296
S+ G IP + P LQ+L + N G I +LG NLT+ NNL G IP
Sbjct: 316 FSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEG 375
Query: 297 LANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLK------ 350
L + +L L + N L +P+ + + +L + L +N +G LP E L
Sbjct: 376 LCSSGNLFKLILFSNSLEGEIPKSLGACRSLR-RVRLQDNSFSGELPSEFTKLPLVYFLD 434
Query: 351 ---NLLRLHIPEYPENLSFFELLNLSYNYFGSEVP 382
N L+ I ++ ++L+L+ N F +P
Sbjct: 435 ISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLP 469
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 2e-28
Identities = 112/343 (32%), Positives = 170/343 (49%), Gaps = 41/343 (11%)
Query: 126 SNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSG-------TANELDFINL 178
+N+S + I+ S SG +S RL + +NL N L T++ L ++NL
Sbjct: 66 NNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNL 125
Query: 179 LTN----------CSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI 228
N LE L + N G +P+ I + SS +K + +G N + IP+ +
Sbjct: 126 SNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSS-LKVLDLGGNVLVGKIPNSL 184
Query: 229 RNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL--- 285
NL +L +LT+ S+QL+G IP +G+ +L+ + +G N+L G I +G LT +L
Sbjct: 185 TNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLV 244
Query: 286 FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPE 345
+NNL G IPSSL N K+L L + NKL+ +P I S+ L + L+L +N L+G +P
Sbjct: 245 YNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKL-ISLDLSDNSLSGEIPEL 303
Query: 346 VGNLKNLLRLH---------IPEYPENLSFFELLNLSYNYFGSEVPTK-GVFNNKTRFSI 395
V L+NL LH IP +L ++L L N F E+P G NN T +
Sbjct: 304 VIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDL 363
Query: 396 IGN---GK----LC--GGLDELHLPSCRYKGSIKPSITSLKVL 429
N G+ LC G L +L L S +G I S+ + + L
Sbjct: 364 STNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSL 406
|
Length = 968 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 1e-18
Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 28/173 (16%)
Query: 488 IREGGFNIVY---------NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITIC 537
+ EGGF VY VA+K+ + + E L+ + H N++K+ +
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 538 SSIDFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGD 591
+ + G L LS + + I + + +EYL + I+H D
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRD 117
Query: 592 LKPSNILLDQDVVT-HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
LKP NILLD D + D GL+K L S I GT Y+AP
Sbjct: 118 LKPENILLDSDNGKVKLADFGLSKLL--------TSDKSLLKTIVGTPAYMAP 162
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 1e-17
Identities = 52/183 (28%), Positives = 77/183 (42%), Gaps = 33/183 (18%)
Query: 487 KIREGGFNIVY---------NVAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIIT 535
K+ G F VY VA+K+ + + ++ E LR + H N++++I
Sbjct: 6 KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65
Query: 536 ICSSIDF--------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSI 587
D EG D R LS + IA+ + +EYL H I
Sbjct: 66 AFEDKDHLYLVMEYCEGGDLFDY---LSRGGPLSEDEAKKIALQILRGLEYL--HSN-GI 119
Query: 588 VHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
+H DLKP NILLD++ V + D GLAK L ++ T GT Y+AP ++
Sbjct: 120 IHRDLKPENILLDENGVVKIADFGLAKKLLK--SSSSLTT------FVGTPWYMAPEVLL 171
Query: 648 ARN 650
N
Sbjct: 172 GGN 174
|
Length = 260 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 76.4 bits (189), Expect = 2e-15
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 35/160 (21%)
Query: 487 KIREGGFNIVY-------------NVAMKVANL-KQKEASRSFAAEFNALRNIRHRNLIK 532
K+ EG F VY VA+K ++ F E +R + H N++K
Sbjct: 6 KLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVK 65
Query: 533 IITICSS-----IDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYL-R 580
++ +C+ I E + G L LSL+ ++ A+ +A +EYL
Sbjct: 66 LLGVCTEEEPLYIVME-----YMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLES 120
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ +H DL N L+ +++V + D GL++ LY +
Sbjct: 121 KNF----IHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 156
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 75.3 bits (186), Expect = 5e-15
Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 37/178 (20%)
Query: 486 NKIREGGFNIVY---------NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIIT 535
K+ EG F VY VA+KV K+ + R E L+ ++H N I+
Sbjct: 5 EKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPN---IVR 61
Query: 536 ICSSIDFEG-----FDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQP 585
+ + E ++ G L + LS + + A+EYL H +
Sbjct: 62 LYDVFEDEDKLYLVMEY--CEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYL--HSK- 116
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
IVH DLKP NILLD+D + D GLA+ L E ++ + GT Y+AP
Sbjct: 117 GIVHRDLKPENILLDEDGHVKLADFGLARQL------DPGEKLTTFV---GTPEYMAP 165
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 3e-14
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 36/161 (22%)
Query: 487 KIREGGFNIVY-------------NVAMKVANL-KQKEASRSFAAEFNALRNIRHRNLIK 532
K+ EG F VY VA+K ++ F E +R + H N++K
Sbjct: 6 KLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVK 65
Query: 533 IITICSS-----IDFEGFDFKAISNGQL-------RLCNLSLTQRVNIAIDVAFAIEYL- 579
++ +C+ I E + G L R LSL+ ++ A+ +A +EYL
Sbjct: 66 LLGVCTEEEPLMIVME-----YMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE 120
Query: 580 RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ +H DL N L+ +++V + D GL++ LY +
Sbjct: 121 SKNF----IHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 67.2 bits (165), Expect = 3e-12
Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 46/178 (25%)
Query: 486 NKIREGGFNIVY------------NVAMKV----ANLKQKEASRSFAAEFNALRNIRHRN 529
K+ EG F VY VA+K A+ ++++ F E ++ + H N
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKD---FLKEARVMKKLGHPN 57
Query: 530 LIKIITICSSID-----FEGFDFKAISNGQLR--------------LCNLSLTQRVNIAI 570
+++++ +C+ + E + G L LSL ++ AI
Sbjct: 58 VVRLLGVCTEEEPLYLVLE-----YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAI 112
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
+A +EYL + VH DL N L+ +D+V + D GL++ +Y +
Sbjct: 113 QIAKGMEYL-ASKK--FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGG 167
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 65.6 bits (161), Expect = 9e-12
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 26/145 (17%)
Query: 489 REGGFNIVYNVAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSS-----I 540
+ G VA+K LK+ +E F E + ++ + H N+++++ +C+ I
Sbjct: 21 KGDGEGTETKVAVKT--LKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQGEPLYI 78
Query: 541 DFEGFDFKAISNGQLRLC------NLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLK 593
E + G L L+L + +A+ +A +EYL + VH DL
Sbjct: 79 VTE-----YMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESKNF----VHRDLA 129
Query: 594 PSNILLDQDVVTHVGDLGLAKFLYG 618
N L+ +++V + D GL++ +Y
Sbjct: 130 ARNCLVTENLVVKISDFGLSRDIYE 154
|
Length = 258 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 6e-11
Identities = 45/185 (24%), Positives = 72/185 (38%), Gaps = 37/185 (20%)
Query: 482 FSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIK 532
F KI +GGF VY VA+KV L+ KE E L+ +H N++K
Sbjct: 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61
Query: 533 IITICSSIDFEGF-----------DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRH 581
S + K + + L+ +Q + ++ +EYL
Sbjct: 62 YYG---SYLKKDELWIVMEFCSGGSLKDLLKSTNQT--LTESQIAYVCKELLKGLEYLHS 116
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYV 641
+ I+H D+K +NILL D + D GL+ L + + GT ++
Sbjct: 117 N---GIIHRDIKAANILLTSDGEVKLIDFGLSAQL---------SDTKARNTMVGTPYWM 164
Query: 642 APVII 646
AP +I
Sbjct: 165 APEVI 169
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 1e-10
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 482 FSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKI 533
F+ K+ G F V+ VA+K+ + F E AL+ +RH++LI +
Sbjct: 8 FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67
Query: 534 ITICSSID--------FEGFDFKAI---SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHH 582
+CS + E A GQ L + +++A VA + YL
Sbjct: 68 FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQ----VLPVASLIDMACQVAEGMAYLEEQ 123
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
+ +H DL NIL+ +D+V V D GLA+ +
Sbjct: 124 ---NSIHRDLAARNILVGEDLVCKVADFGLARLI 154
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 48/185 (25%), Positives = 75/185 (40%), Gaps = 39/185 (21%)
Query: 486 NKIREGGFNIVYNV---------AMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKII 534
NKI G F VY A+K ++ + + A E L ++H NL+K
Sbjct: 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65
Query: 535 TI-------------CSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRH 581
+ CS G + + +G R+ + + + + + + YL
Sbjct: 66 GVEVHREKVYIFMEYCS----GGTLEELLEHG--RILDEHVIRVYTLQLLEG--LAYLHS 117
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYV 641
H IVH D+KP+NI LD + V +GD G A L + TT + GT Y+
Sbjct: 118 H---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKL---KNNTTTM-GEEVQSLAGTPAYM 170
Query: 642 APVII 646
AP +I
Sbjct: 171 APEVI 175
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 58.3 bits (142), Expect = 2e-09
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 41/186 (22%)
Query: 486 NKIREGGFNIVY---------NVAMKVANL-----KQKEASRSFAAEFNALRNIRHRNLI 531
+I +G F VY +K +L K++E + + E L+ + H N+I
Sbjct: 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALN---EVKILKKLNHPNII 62
Query: 532 KII-------TICSSIDF-EGFD-FKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL--R 580
K +C +++ +G D + I + Q ++ + + A++YL R
Sbjct: 63 KYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR 122
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
I+H D+KP NI L + + +GD G++K L +T + A + + GT Y
Sbjct: 123 K-----ILHRDIKPQNIFLTSNGLVKLGDFGISKVL-----SSTVDLAKTVV---GTPYY 169
Query: 641 VAPVII 646
++P +
Sbjct: 170 LSPELC 175
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 4e-09
Identities = 40/184 (21%), Positives = 70/184 (38%), Gaps = 37/184 (20%)
Query: 486 NKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKII 534
+ G F VY +A+K L +E + E L +++H N+++
Sbjct: 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65
Query: 535 TICSSIDFEGF----DFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYL-RHH 582
+ ++ +S G L + ++ + + YL +
Sbjct: 66 GSERDEEKNTLNIFLEY--VSGGSLSSLLKKFGKLPEPVIRKY--TRQILEGLAYLHSNG 121
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
IVH D+K +NIL+D D V + D G AK L ET + + GT ++A
Sbjct: 122 ----IVHRDIKGANILVDSDGVVKLADFGCAKRL------GDIETGEGTGSVRGTPYWMA 171
Query: 643 PVII 646
P +I
Sbjct: 172 PEVI 175
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 5e-09
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 34/149 (22%)
Query: 488 IREGGFNIVY-------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI 540
I +G F V VA+K A ++F AE + + +RH NL++++ +
Sbjct: 14 IGKGEFGDVMLGDYRGQKVAVKCLKDDSTAA-QAFLAEASVMTTLRHPNLVQLLGVV--- 69
Query: 541 DFEGFDFKAI-------SNGQL--------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQP 585
+ + G L R ++L Q++ A+DV +EYL +
Sbjct: 70 ----LQGNPLYIVTEYMAKGSLVDYLRSRGRAV-ITLAQQLGFALDVCEGMEYLE---EK 121
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+ VH DL N+L+ +D+V V D GLAK
Sbjct: 122 NFVHRDLAARNVLVSEDLVAKVSDFGLAK 150
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 6e-09
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 568 IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
++ A+EYL I+H D+KP NILLD+ H+ D +A + P T +
Sbjct: 105 WICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKV---TPDTLTTS 158
Query: 628 ASSSIGINGTVGYVAPVIIAARN 650
S GT GY+AP ++ +
Sbjct: 159 TS------GTPGYMAPEVLCRQG 175
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 7e-09
Identities = 48/180 (26%), Positives = 71/180 (39%), Gaps = 42/180 (23%)
Query: 491 GGFNIVYNV---------AMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICS 538
G F V V AMKV + +++ E N L I H ++K +
Sbjct: 4 GSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVK--LHYA 61
Query: 539 SIDFEGF----DFKAISNGQL--RLCN---LSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
E ++ G+L L S + A ++ A+EYL H I++
Sbjct: 62 FQTEEKLYLVLEY--APGGELFSHLSKEGRFSEERARFYAAEIVLALEYL--HSL-GIIY 116
Query: 590 GDLKPSNILLDQD---VVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
DLKP NILLD D +T D GLAK L + ++ GT Y+AP ++
Sbjct: 117 RDLKPENILLDADGHIKLT---DFGLAKELS-----SEGSRTNTFC---GTPEYLAPEVL 165
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 57.4 bits (137), Expect = 1e-08
Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 24/235 (10%)
Query: 487 KIREGGFNIVY------NVAMKVANLK---QKEASRSFAAEFNALRNIRH-RNLIKIITI 536
K+ EG F VY VA+KV K + + F E L ++ H N++K+
Sbjct: 7 KLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDF 66
Query: 537 CSSID--------FEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIV 588
+G + + R LS ++ + I + A+EYL I+
Sbjct: 67 FQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---II 123
Query: 589 HGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
H D+KP NILLD+D V + D GLAK L +PG+T+ + GT GY+AP ++
Sbjct: 124 HRDIKPENILLDRDGRVVKLIDFGLAKLL--PDPGSTSSIPALPSTSVGTPGYMAPEVLL 181
Query: 648 ARNLENREKRHTVMSFPQRFALNEKKQNKSILKSAGIKGKKTVSFFLSLLSPSCS 702
+L + S + +T+ L L +PS +
Sbjct: 182 GLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA 236
|
Length = 384 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 5e-08
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 30/187 (16%)
Query: 289 LQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGN 348
L+G IP+ ++ + L +++S N + +P + S+T+L + L+L N NGS+P +G
Sbjct: 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEV-LDLSYNSFNGSIPESLGQ 488
Query: 349 LKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPTK--GVFNNKTRFSIIGNGKLCGGLD 406
L +L +LNL+ N VP G ++ F+ N LCG
Sbjct: 489 LTSL---------------RILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCG--- 530
Query: 407 ELHLPSCRYKGSIKPSITSLKVLIPVIVSCLILLVISFIFYARR------KKPAHKDSNM 460
+P R G + + V V+ L L++ + ++ RR ++ A +++
Sbjct: 531 ---IPGLRACGPHLSVGAKIGIAFGVSVAFLFLVICAMCWWKRRQNILRAQRIAAREAPY 587
Query: 461 LSMKQQF 467
+ F
Sbjct: 588 AKARTHF 594
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 1e-07
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 188 LYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGT 247
L + G G +P+ I+ L ++ I + N I IP + ++ +L L + + G+
Sbjct: 423 LGLDNQGLRGFIPNDISKLRH-LQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGS 481
Query: 248 IPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFN 287
IP +G+ +L++LN+ GN L G + ++LG L FN
Sbjct: 482 IPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFN 521
|
Length = 623 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 1e-07
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 22/143 (15%)
Query: 487 KIREGGFNIVYN---VAMKVA--NLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID 541
I EG F V KVA N+K +++F E + + H+NL++++ + I
Sbjct: 13 IIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGV---IL 69
Query: 542 FEGFDF--KAISNGQL--------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGD 591
G + +S G L R +S+ Q + ++DVA +EYL +VH D
Sbjct: 70 HNGLYIVMELMSKGNLVNFLRTRGRAL-VSVIQLLQFSLDVAEGMEYLE---SKKLVHRD 125
Query: 592 LKPSNILLDQDVVTHVGDLGLAK 614
L NIL+ +D V V D GLA+
Sbjct: 126 LAARNILVSEDGVAKVSDFGLAR 148
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 53.3 bits (129), Expect = 1e-07
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 27/152 (17%)
Query: 486 NKIREGGFNIVYN---------VAMKVANLKQKEASRSFAA--EFNALRNIRHRNLIKII 534
+I EG + VY VA+K ++ ++ A E L+ +RH N++++
Sbjct: 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLK 64
Query: 535 TICSS-------IDFEGFDF---KAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQ 584
I +S + FE D + + +++ + +Q + ++YL H
Sbjct: 65 EIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKF---TESQIKCYMKQLLEGLQYL-HSNG 120
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
I+H D+K SNIL++ D V + D GLA+
Sbjct: 121 --ILHRDIKGSNILINNDGVLKLADFGLARPY 150
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 25/153 (16%)
Query: 486 NKIREGGFNIVY-------------NVAMKVANLKQKEASRS-FAAEFNALRNIRHRNLI 531
++ EG F V VA+K N +E RS F E LR + H N++
Sbjct: 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69
Query: 532 KIITICSSIDFEGFDF--KAISNGQLRL------CNLSLTQRVNIAIDVAFAIEYLRHHC 583
K +C + + +G LR ++L + + + + ++YL
Sbjct: 70 KYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ- 128
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
+H DL NIL++ + + + D GLAK L
Sbjct: 129 --RYIHRDLAARNILVESEDLVKISDFGLAKVL 159
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 4e-07
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 16/79 (20%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT-TAET 627
A V A+EYL H IV+ DLKP N+LLD D + D G AK + + T T
Sbjct: 107 AAQVVLALEYL-HSL--DIVYRDLKPENLLLDSDGYIKITDFGFAKRV---KGRTYT--- 157
Query: 628 ASSSIGINGTVGYVAPVII 646
+ GT Y+AP II
Sbjct: 158 ------LCGTPEYLAPEII 170
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 4e-07
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF-LYGYEPGTTAETASSSIG 633
A+EYL + I+H DLKP NIL+D + + D GL+K L + +
Sbjct: 105 ALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDK-R 160
Query: 634 INGTVGYVAPVII 646
I GT Y+AP +I
Sbjct: 161 IVGTPDYIAPEVI 173
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 4e-07
Identities = 43/193 (22%), Positives = 72/193 (37%), Gaps = 46/193 (23%)
Query: 486 NKIREGGFNIVYNV------------AMKVANLKQKEASRSFAAEFNALRNIRHRNLIKI 533
I +G F V V + N+ +KE + +E N LR ++H N+++
Sbjct: 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQ-LVSEVNILRELKHPNIVRY 64
Query: 534 I---------TI------CSSIDFEGFDFKAISNGQLRLCNLSLTQRV--NIAIDVAFAI 576
T+ C D K + + + I + A+
Sbjct: 65 YDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERK------YIEEEFIWRILTQLLLAL 118
Query: 577 EYL--RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGI 634
R +++H DLKP+NI LD + +GD GLAK L G + A + +
Sbjct: 119 YECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL-----GHDSSFAKTYV-- 171
Query: 635 NGTVGYVAPVIIA 647
GT Y++P +
Sbjct: 172 -GTPYYMSPEQLN 183
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 7e-07
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 12/72 (16%)
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGI 634
A EYL + I++ DLKP N+LLD + + D G AK L + T
Sbjct: 105 AFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWT---------F 152
Query: 635 NGTVGYVAPVII 646
GT YVAP II
Sbjct: 153 CGTPEYVAPEII 164
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 7e-07
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 482 FSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID 541
+ PAN +G +V +K +Q + + E N L+ + H N++K CS
Sbjct: 25 YDPAN---DGTGEMVAVKTLKRECGQQNTSG--WKKEINILKTLYHENIVKYKGCCSEQG 79
Query: 542 FEGFDF--KAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPS 595
+G + + G LR L+L Q + A + + YL H Q I H DL
Sbjct: 80 GKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYL--HSQHYI-HRDLAAR 136
Query: 596 NILLDQDVVTHVGDLGLAK 614
N+LLD D + +GD GLAK
Sbjct: 137 NVLLDNDRLVKIGDFGLAK 155
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 9e-07
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 33/152 (21%)
Query: 487 KIREGGFNIV----YNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKIITICSS 539
K+ G F V +N KVA K + S F E ++ +RH L+++ +CS
Sbjct: 13 KLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCS- 71
Query: 540 IDFEGF-------------DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL--RHHCQ 584
+ E DF + +G+ + L L Q V++A +A + YL R++
Sbjct: 72 -EEEPIYIVTEYMSKGSLLDF--LKSGEGK--KLRLPQLVDMAAQIAEGMAYLESRNY-- 124
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
+H DL NIL+ +++V + D GLA+ +
Sbjct: 125 ---IHRDLAARNILVGENLVCKIADFGLARLI 153
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 32/162 (19%)
Query: 497 YNVAMKVANLKQKE-ASRSFAAEFNALRNIRHRNLIKIITICSS-------IDFEGFDFK 548
Y++ + V LK+ F E ++ I+H NL++++ +C+ +F
Sbjct: 30 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF------ 83
Query: 549 AISNGQL----RLCNLSLTQRVNI---AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ 601
++ G L R CN V + A ++ A+EYL + +H DL N L+ +
Sbjct: 84 -MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGE 139
Query: 602 DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
+ + V D GL++ + G +T ++ G + + AP
Sbjct: 140 NHLVKVADFGLSRLMTG-------DTYTAHAGAKFPIKWTAP 174
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 13/135 (9%)
Query: 490 EGGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548
EG +N VA+K LK + F AE ++ +RH LI++ +C+ + +
Sbjct: 24 EGLWNNTTPVAVK--TLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81
Query: 549 AISNGQL-------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ 601
+ G L L L Q +++A VA + YL + +H DL N+L+ +
Sbjct: 82 LMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGE 138
Query: 602 DVVTHVGDLGLAKFL 616
+ + V D GLA+ +
Sbjct: 139 NNICKVADFGLARVI 153
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 27/152 (17%)
Query: 487 KIREGGFNIVY---------NVAMKVANLKQKEASRSFAA----EFNALRNIRHRNLIKI 533
KI EG + +VY VA+K +K + S E L+ + H N+IK+
Sbjct: 6 KIGEGTYGVVYKARDKLTGEIVAIK--KIKLRFESEGIPKTALREIKLLKELNHPNIIKL 63
Query: 534 ITICSS-------IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + +F D + + R L + + + + + H
Sbjct: 64 LDVFRHKGDLYLVFEFMDTDLYKLIKDRQRG--LPESLIKSYLYQLLQGLAFCHSH---G 118
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
I+H DLKP N+L++ + V + D GLA+
Sbjct: 119 ILHRDLKPENLLINTEGVLKLADFGLARSFGS 150
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 3e-06
Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 41/162 (25%)
Query: 486 NKIREGGFNIVY-----NVAMKVANLKQKEASRSFAAE---FNALRNI------RHRNLI 531
K+ EG + +VY VA K K R A + F ALR I +H N+I
Sbjct: 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNII 65
Query: 532 KIITICSSIDFEG--FDF------KAISNGQLRL------CNLSLTQRVNIAIDVAFAIE 577
++ + F+F K I + + L + +T R +E
Sbjct: 66 GLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLR---------GLE 116
Query: 578 YLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619
YL H I+H DLKP+N+L+ D V + D GLA+ +G
Sbjct: 117 YL-HSNW--ILHRDLKPNNLLIASDGVLKLADFGLARS-FGS 154
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 3e-06
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 42/128 (32%)
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
L H Q I++ DLKP N+LLD D + DLGLA L + S + G GT
Sbjct: 110 LEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVEL--------KDGQSKTKGYAGTP 161
Query: 639 GYVAPVI----------------------IAAR--------NLENREKRHTVM----SFP 664
G++AP + IAAR +EN+E + ++ ++P
Sbjct: 162 GFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYP 221
Query: 665 QRFALNEK 672
+F+ K
Sbjct: 222 DKFSPASK 229
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 49.4 bits (119), Expect = 3e-06
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 33/157 (21%)
Query: 482 FSPANKIREGGFNIVYN---------VAMKVANLKQKE------ASRSFAAEFNALRNIR 526
+ K+ EG + +VY VA+K L +E A R E + L+ ++
Sbjct: 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALR----EISLLKELK 56
Query: 527 HRNLIKIITICSSID-----FEGFDF---KAISNGQLRLCNLSLTQRVNIAIDVAFAIEY 578
H N++K++ + + FE D K + L + +L + I + + Y
Sbjct: 57 HPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPL-SPNLIKS--IMYQLLRGLAY 113
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
H I+H DLKP NIL+++D V + D GLA+
Sbjct: 114 CHSHR---ILHRDLKPQNILINRDGVLKLADFGLARA 147
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 4e-06
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 23/139 (16%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID-----FE---------- 543
VA+K + A + F E L ++H+++++ +C+ FE
Sbjct: 38 VAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRF 97
Query: 544 ----GFDFKAISNGQLRLCN-LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598
G D K ++ G+ L+L Q + IA +A + YL VH DL N L
Sbjct: 98 LRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYL---ASLHFVHRDLATRNCL 154
Query: 599 LDQDVVTHVGDLGLAKFLY 617
+ Q +V +GD G+++ +Y
Sbjct: 155 VGQGLVVKIGDFGMSRDIY 173
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 4e-06
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 499 VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSID-----FE------- 543
VA+K LK+ +A + F E L N +H N++K +C+ D FE
Sbjct: 38 VAVKT--LKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDL 95
Query: 544 -------GFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL--RHHCQPSIVHGDLKP 594
G D + + + L+L+Q + IA+ +A + YL +H VH DL
Sbjct: 96 NKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-----FVHRDLAT 150
Query: 595 SNILLDQDVVTHVGDLGLAKFLY 617
N L+ D+V +GD G+++ +Y
Sbjct: 151 RNCLVGYDLVVKIGDFGMSRDVY 173
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 4e-06
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 497 YNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG 553
Y+VA+K+ KE S S F E + + H L+++ +C+ + +SNG
Sbjct: 29 YDVAIKMI----KEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNG 84
Query: 554 QL------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV 607
L +Q + + DV + YL +H DL N L+D V
Sbjct: 85 CLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKV 141
Query: 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
D GL++++ E +SS+G V + P ++
Sbjct: 142 SDFGLSRYVLDDE-------YTSSVGSKFPVRWSPPEVL 173
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 48.7 bits (117), Expect = 5e-06
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 20/119 (16%)
Query: 522 LRNIRHRNLIKIITICSSIDFEGFD-------------FKAISNGQLRLCNLSLTQRVNI 568
LR++RH N+I ++ I E F+ K I + Q L+
Sbjct: 53 LRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQ----PLTDDHIQYF 108
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
+ ++YL H +++H DLKPSNIL++ + + D GLA+ + E T
Sbjct: 109 LYQILRGLKYL-HSA--NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLT 164
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 9e-06
Identities = 53/168 (31%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 485 ANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544
A + +G F V V K LK+KE + A L+N++H L+ + + +
Sbjct: 14 AKRKSDGSFYAV-KVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLY 72
Query: 545 FDFKAISNGQLRL------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598
F ++ G+L C L R A +VA AI YL H +I++ DLKP NIL
Sbjct: 73 FVLDYVNGGELFFHLQRERCFLEPRARF-YAAEVASAIGYL--HSL-NIIYRDLKPENIL 128
Query: 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
LD + D GL K G EP T T GT Y+AP ++
Sbjct: 129 LDSQGHVVLTDFGLCK--EGVEPEETTST------FCGTPEYLAPEVL 168
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 1e-05
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNL 78
L+ INL N G IP +G + SLE L LS NSF+ +IP +L ++L L+ + N+L
Sbjct: 444 LQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
Length = 623 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 1e-05
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619
++ Q V + +A ++YL VH DL NIL++ ++V V D GL++ L
Sbjct: 103 FTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159
Query: 620 EPGTTAETASSSIGINGTVGYVAPVIIAAR 649
E T T I I T AP IA R
Sbjct: 160 EA--TYTTKGGKIPIRWT----APEAIAYR 183
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 1e-05
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 29/172 (16%)
Query: 513 RSFAAEFNALRNIRHRNLIK----------IITICSSIDFEGFD-FKAISNGQLRLCNLS 561
R F +E + + H N+I ++ I ++ D F ++GQ +
Sbjct: 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQF-----T 104
Query: 562 LTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621
+ Q V + +A ++YL + + VH DL NIL++ ++V V D GL++FL E
Sbjct: 105 VIQLVGMLRGIAAGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL---ED 158
Query: 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHT-------VMSFPQR 666
T+ T +SS+G + + AP IA R + + VMS+ +R
Sbjct: 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 210
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 1e-05
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
L H Q IV+ DLKP N+LLD + DLGLA L G + G GT
Sbjct: 108 LEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIK---------GRAGTP 158
Query: 639 GYVAPVII 646
GY+AP ++
Sbjct: 159 GYMAPEVL 166
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 2e-05
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 24/140 (17%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID-----FE---------- 543
VA+K A + F E L N++H +++K +C D FE
Sbjct: 38 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 97
Query: 544 ----GFDFKAISNGQLRLCN--LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597
G D + +GQ R L L+Q ++IA +A + YL VH DL N
Sbjct: 98 LRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNC 154
Query: 598 LLDQDVVTHVGDLGLAKFLY 617
L+ +++ +GD G+++ +Y
Sbjct: 155 LVGANLLVKIGDFGMSRDVY 174
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 41/189 (21%)
Query: 481 NFSPANKIREGGFNIVYN---------VAMKVANL--KQKEASRSFAAEFNALRNIRHRN 529
N+ + I G F +VY VA+K +L ++EA +S E + L+N++H N
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60
Query: 530 LIKIITICSSIDFEGFDFKAISNGQLR------------LCNLSLTQRVNIAIDVAFAIE 577
++K I + D + NG LR L + + Q V +
Sbjct: 61 IVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQ-------VLQGLA 113
Query: 578 YLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGT 637
YL H Q ++H D+K +NIL +D V + D G+A L + GT
Sbjct: 114 YL--HEQ-GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA--------SVVGT 162
Query: 638 VGYVAPVII 646
++AP +I
Sbjct: 163 PYWMAPEVI 171
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 3e-05
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 36/147 (24%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC-----------------SSID 541
VA+K +K +++F AE + + +RH NL++++ + S +D
Sbjct: 32 VAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 89
Query: 542 FEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ 601
+ +++ G L SL DV A+EYL + + VH DL N+L+ +
Sbjct: 90 YLRSRGRSVLGGD-CLLKFSL--------DVCEAMEYLEAN---NFVHRDLAARNVLVSE 137
Query: 602 DVVTHVGDLGLAKFLYGYEPGTTAETA 628
D V V D GL K E +T +T
Sbjct: 138 DNVAKVSDFGLTK-----EASSTQDTG 159
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 4e-05
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 37/187 (19%)
Query: 481 NFSPANKIREGGFNIVYNV---------AMKVANLK---QKEASRSFAAEFNALRNIRHR 528
+F K+ +G + VY V A+K +L QKE + E L ++ H
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVN-EIRILASVNHP 59
Query: 529 NLIK-------IITICSSIDFEGFD--FKAISNGQLRLCNLSLTQRV-NIAIDVAFAIEY 578
N+I +C +++ F KAIS + + L Q + I I + ++
Sbjct: 60 NIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRK-KKRKLIPEQEIWRIFIQLLRGLQA 118
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
L H Q I+H DLK +NILL + + +GDLG++K L A + I GT
Sbjct: 119 L--HEQ-KILHRDLKSANILLVANDLVKIGDLGISKVL-------KKNMAKTQI---GTP 165
Query: 639 GYVAPVI 645
Y+AP +
Sbjct: 166 HYMAPEV 172
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 4e-05
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 34/164 (20%)
Query: 500 AMKVAN------LKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAIS 551
A+KV LKQ++ + E L+ + H +I++ + D F + +
Sbjct: 30 ALKVMAIPEVIRLKQEQHVHN---EKRVLKEVSHPFIIRLF--WTEHDQRFLYMLMEYVP 84
Query: 552 NGQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605
G+L L + R + A ++ A+EYL IV+ DLKP NILLD++
Sbjct: 85 GGEL-FSYLRNSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHI 140
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ D G AK + + + GT Y+AP +I ++
Sbjct: 141 KLTDFGFAK-----------KLRDRTWTLCGTPEYLAPEVIQSK 173
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 5e-05
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 14/79 (17%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A EYL H I++ DLKP N+LLD V D G AK +
Sbjct: 126 ELVLAFEYL-HSK--DIIYRDLKPENLLLDNKGHVKVTDFGFAK-----------KVPDR 171
Query: 631 SIGINGTVGYVAPVIIAAR 649
+ + GT Y+AP +I ++
Sbjct: 172 TFTLCGTPEYLAPEVIQSK 190
|
Length = 329 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 5e-05
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
L Q IV+ DLKP NILLD + DLGLA + G T + G GTV
Sbjct: 115 LEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHV---PEGQTIK------GRVGTV 165
Query: 639 GYVAPVII 646
GY+AP ++
Sbjct: 166 GYMAPEVV 173
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|225714 COG3173, COG3173, Predicted aminoglycoside phosphotransferase [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 39/188 (20%), Positives = 62/188 (32%), Gaps = 29/188 (15%)
Query: 447 YARRKKPAHKDSNML-SMKQQFPMI-SHAELSKATNNFSPANKIR----EGGFNIVYNVA 500
Y RK P K+++ +I + ++ P + EG + V
Sbjct: 51 YVLRKPPRGDPVESAHDEKREYRVIAALLDV------DVPVPRAFGLCGEGYLGTPFYVM 104
Query: 501 MKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF-DFKAISN------- 552
V + E S + R L + SID G D +
Sbjct: 105 EWV----EGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLA 160
Query: 553 ---GQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQ--PSIVHGDLKPSNILLDQDVVTHV 607
+ R L R+ +A + +E R P +VHGD +P N+++D T V
Sbjct: 161 RWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGV 220
Query: 608 GDLGLAKF 615
D LA
Sbjct: 221 LDWELATL 228
|
Length = 321 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 5e-05
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 23/148 (15%)
Query: 487 KIREGGFNIVYNVAMKVANLKQKEAS----RSFAAEFNALRNIRHRNLIKIITICSSI-- 540
K+ G N Y A V + AS F E R+++H NL++ + C+ +
Sbjct: 10 KVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTP 69
Query: 541 -----------DFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
D +G+ ++ +L + + QR +A ++A + +L + + +H
Sbjct: 70 YLLVMEFCPLGDLKGY-LRSCRKAELMTPDPTTLQR--MACEIALGLLHLHKN---NFIH 123
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFLY 617
DL N LL D+ +GD GL+ Y
Sbjct: 124 SDLALRNCLLTADLTVKIGDYGLSHNKY 151
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 5e-05
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
L + + V+ DLKP NILLD + DLGLA S G GTV
Sbjct: 115 LEDLHRENTVYRDLKPENILLDDYGHIRISDLGLA---------VKIPEGESIRGRVGTV 165
Query: 639 GYVAPVII 646
GY+AP ++
Sbjct: 166 GYMAPEVL 173
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 6e-05
Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 29/138 (21%)
Query: 501 MKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS--------- 551
MK+ E F +E +++ H N++K+I +C FE + I
Sbjct: 35 MKLDIHTYSEI-EEFLSEAACMKDFDHPNVMKLIGVC----FEASSLQKIPKPMVILPFM 89
Query: 552 -NGQLRLC-----------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+G L L L + +D+A +EYL + + +H DL N +L
Sbjct: 90 KHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCML 146
Query: 600 DQDVVTHVGDLGLAKFLY 617
+D+ V D GL+K +Y
Sbjct: 147 REDMTVCVADFGLSKKIY 164
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 7e-05
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 491 GGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS------IDFE 543
G +N VA+K LK +F E ++ +RH L+ + + S +F
Sbjct: 25 GTWNGTTKVAIK--TLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFM 82
Query: 544 G----FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
G DF +G+ L L Q V++A +A + Y+ + + +H DL+ +NIL+
Sbjct: 83 GKGSLLDFLKEGDGK----YLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILV 135
Query: 600 DQDVVTHVGDLGLAKFL 616
++V + D GLA+ +
Sbjct: 136 GDNLVCKIADFGLARLI 152
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 7e-05
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 10/110 (9%)
Query: 518 EFNALRNIRHRNLIKIITICSS-----IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDV 572
E L+ +RH NL+ +I + + FE D + + + L ++ +
Sbjct: 50 EIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQI 109
Query: 573 AFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622
IE+ H +I+H D+KP NIL+ Q V + D G A+ L PG
Sbjct: 110 LRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA--PG 154
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 1e-04
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 491 GGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKI--------ITICSSID 541
G +N VA+K LK S +F E ++ +RH L+++ I I +
Sbjct: 25 GTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 82
Query: 542 FEG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+G DF G+ L L Q V++A +A + Y+ + + VH DL+ +NIL+
Sbjct: 83 SKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILV 135
Query: 600 DQDVVTHVGDLGLAKFL 616
+++V V D GLA+ +
Sbjct: 136 GENLVCKVADFGLARLI 152
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 1e-04
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 28/163 (17%)
Query: 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAA--EFNALRNIRHRN 529
F N+I EG + IVY VA+K + + ++ E L N+RH N
Sbjct: 8 EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPN 67
Query: 530 LIKI--ITICSSID--FEGFDF------KAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL 579
++++ + + +D F ++ + N S +Q + + + ++YL
Sbjct: 68 IVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMP---TPFSESQVKCLMLQLLRGLQYL 124
Query: 580 RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622
+ I+H DLK SN+LL + D GLA+ YG
Sbjct: 125 HENF---IIHRDLKVSNLLLTDKGCLKIADFGLAR-TYGLPAK 163
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 487 KIREGGFNIVY------NVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKI------ 533
K+ G F V+ N + V LK S SF E ++ +RH L+++
Sbjct: 13 KLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE 72
Query: 534 --ITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGD 591
I I + +G + +G+ R L L V++A VA + Y+ + + +H D
Sbjct: 73 EPIYIVTEYMSKGSLLDFLKDGEGR--ALKLPNLVDMAAQVAAGMAYIE---RMNYIHRD 127
Query: 592 LKPSNILLDQDVVTHVGDLGLAKFL 616
L+ +NIL+ +V + D GLA+ +
Sbjct: 128 LRSANILVGDGLVCKIADFGLARLI 152
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 40/163 (24%)
Query: 499 VAMKVANLKQKEASRS-FAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRL 557
A+K ++ E R E LR+ ++K C + F G++ +
Sbjct: 29 YALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVK----C----YGAF----YKEGEISI 76
Query: 558 C-------NL-SLTQRVN---------IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD 600
+L L ++V IA + ++YL H + I+H D+KPSN+L++
Sbjct: 77 VLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYL--HTKRHIIHRDIKPSNLLIN 134
Query: 601 QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
+ D G++K L T + ++ + GTV Y++P
Sbjct: 135 SKGEVKIADFGISKVL-----ENTLDQCNTFV---GTVTYMSP 169
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-04
Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 37/160 (23%)
Query: 487 KIREGGFNIVYN---------VAMKVANLKQKEA--SRSFAAEFNALRNIRHRNLIKIIT 535
+I EG IV+ VA+K L++ E E AL+ +H ++K++
Sbjct: 7 RIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLD 66
Query: 536 I-----CSSIDFE--GFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR------HH 582
+ + E D + LR L + A Y+R +
Sbjct: 67 VFPHGSGFVLVMEYMPSDLSEV----LRDEERPLPE--------AQVKSYMRMLLKGVAY 114
Query: 583 C-QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621
I+H DLKP+N+L+ D V + D GLA+ EP
Sbjct: 115 MHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 567 NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
NI + + A+ YL H + IVH DL P+NI+L +D + D GLAK
Sbjct: 117 NIFVQMVLALRYL--HKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAK 162
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 38/161 (23%)
Query: 481 NFSPANKIREGGFNIVYNVAMKVANLKQ---KEASRSFAA---------EFNALRNIRHR 528
+ P I G + +V + A+ + K+ K+ +F E LR+ +H
Sbjct: 6 RYKPIENIGSGAYGVVCS-AIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHD 64
Query: 529 NLIKIITICSSIDFEGFDFKAI--------SN-GQLRLCNLSLT-QRVNIAIDVAFAIEY 578
N+I I I G DFK + S+ + + LT + + F +
Sbjct: 65 NIIAIRDILRP---PGADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIR-----YFLYQL 116
Query: 579 LR-----HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
LR H ++H DLKPSN+L+++D +GD G+A+
Sbjct: 117 LRGLKYIHSAN--VIHRDLKPSNLLVNEDCELRIGDFGMAR 155
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-04
Identities = 35/160 (21%), Positives = 62/160 (38%), Gaps = 32/160 (20%)
Query: 487 KIREGGFNIVYNVAMKVANLKQKEA--------------SRSFAAEFNALRNIRHRNLIK 532
I G + VY K ++ A S+S E LR ++H N++
Sbjct: 7 CIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVS 66
Query: 533 IITICSS---------IDFEGFDFKAISNGQLRLCNLSLTQRV--NIAIDVAFAIEYLRH 581
++ + D+ D I + +S+ + ++ + + YL
Sbjct: 67 LVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYL-- 124
Query: 582 HCQPSIVHGDLKPSNILL----DQDVVTHVGDLGLAKFLY 617
H ++H DLKP+NIL+ + V +GDLGLA+
Sbjct: 125 HSN-WVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFN 163
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 2e-04
Identities = 47/154 (30%), Positives = 66/154 (42%), Gaps = 18/154 (11%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--- 555
V K A LK+KE + L+N++H L+ + + D F I+ G+L
Sbjct: 27 VLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYH 86
Query: 556 ---RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612
C L R A ++A A+ YL +IV+ DLKP NILLD + D GL
Sbjct: 87 LQRERCFLEPRARF-YAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGL 142
Query: 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
K E T T GT Y+AP ++
Sbjct: 143 CK--ENIEHNGTTST------FCGTPEYLAPEVL 168
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 20/156 (12%)
Query: 500 AMKVAN----LKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL 555
A+KV LK+KE A L+N++H L+ + + D F ++ G+L
Sbjct: 24 AVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGEL 83
Query: 556 -----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
R + + A ++A A+ YL H I++ DLKP NILLD + D
Sbjct: 84 FFHLQRERSFPEPRARFYAAEIASALGYL-HSLN--IIYRDLKPENILLDSQGHVVLTDF 140
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
GL K G E T T GT Y+AP ++
Sbjct: 141 GLCK--EGIEHSKTTST------FCGTPEYLAPEVL 168
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 2e-04
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 21/137 (15%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRL- 557
VA+K A + F E L N++H +++K +C D F+ + +G L
Sbjct: 38 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 97
Query: 558 -----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD 600
L+ +Q ++IA +A + YL VH DL N L+
Sbjct: 98 LRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVG 154
Query: 601 QDVVTHVGDLGLAKFLY 617
++++ +GD G+++ +Y
Sbjct: 155 ENLLVKIGDFGMSRDVY 171
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 21/147 (14%)
Query: 483 SPANKIREGGFNIVYNVAMKVANL-----KQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
S A I F+ V + + V L Q A R++ E L+ + H+N+I ++ +
Sbjct: 31 SGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVF 89
Query: 538 S-SIDFEGF-DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL--------RHHCQPSI 587
+ E F D + + L + +L Q +++ +D + YL +H I
Sbjct: 90 TPQKSLEEFQDVYLV----MELMDANLCQVIHMELDHE-RMSYLLYQMLCGIKHLHSAGI 144
Query: 588 VHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H DLKPSNI++ D + D GLA+
Sbjct: 145 IHRDLKPSNIVVKSDCTLKILDFGLAR 171
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 2e-04
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
++H DLKPSNILL+ D + D GLA+ L
Sbjct: 128 VIHRDLKPSNILLNSDCRVKLADFGLARSLS 158
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 3e-04
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGI 634
+EYL + Q +H D+K NILL +D + D G++ L + G +
Sbjct: 114 GLEYLHSNGQ---IHRDIKAGNILLGEDGSVKIADFGVSASL--ADGGDRTRKVRKTFV- 167
Query: 635 NGTVGYVAPVII 646
GT ++AP ++
Sbjct: 168 -GTPCWMAPEVM 178
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 3e-04
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 497 YNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKI--------ITICSSIDFEG- 544
YN KVA K+ S S F AE N ++ ++H L+++ I I + G
Sbjct: 27 YNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMENGS 86
Query: 545 -FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF G L++ + +++A +A + ++ + + +H DL+ +NIL+ + +
Sbjct: 87 LVDFLKTPEGI----KLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETL 139
Query: 604 VTHVGDLGLAKFLYGYE 620
+ D GLA+ + E
Sbjct: 140 CCKIADFGLARLIEDNE 156
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 44/195 (22%)
Query: 479 TNNFSPANKIREGGFNIVY---------NVAMK---VANLKQKEASRSFAAEFNALRNIR 526
NF KI +G F++VY VA+K + + +A + E + L+ +
Sbjct: 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60
Query: 527 HRNLIKIITICSSID-------FEGFDFKAISNGQLRLCNLSLTQRVNIA--------ID 571
H N+IK + S I+ E D +S R+ Q+ I +
Sbjct: 61 HPNVIKYLA--SFIENNELNIVLELADAGDLS----RMIKHFKKQKRLIPERTIWKYFVQ 114
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSS 631
+ A+E++ I+H D+KP+N+ + V +GDLGL +F + TTA A S
Sbjct: 115 LCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRF---FSSKTTA--AHSL 166
Query: 632 IGINGTVGYVAPVII 646
+ GT Y++P I
Sbjct: 167 V---GTPYYMSPERI 178
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 3e-04
Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 23/151 (15%)
Query: 486 NKIREGGFNIVYN---------VAMKVANLKQKEASRSFAA--EFNALRNIRHRNLIKII 534
KI +G F V+ VA+K ++ ++ A E L+ ++H N++ +I
Sbjct: 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 77
Query: 535 TICSSIDFEGFDFKAISNGQLRLCN---LSLTQRVNIAIDVAFAIEYLRH--------HC 583
IC + +K C L N+ ++ + ++ H
Sbjct: 78 EICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHR 137
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
I+H D+K +NIL+ +D + + D GLA+
Sbjct: 138 N-KILHRDMKAANILITKDGILKLADFGLAR 167
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 3e-04
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 52/211 (24%)
Query: 469 MISHAELSKATNNFSPANKIREGGFNIVYNVAMK----VANLKQ----KEASRSFAAEFN 520
M+ L T+ + I +G + VY V K +A +K + AE+N
Sbjct: 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYN 70
Query: 521 ALRNI-RHRNLIKIITICSSIDFEGFDFKA--ISNGQL----RLCN-----------LSL 562
L+++ H N++K F G +KA + GQL LCN L
Sbjct: 71 ILQSLPNHPNVVK---------FYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLIC 121
Query: 563 TQRVN---IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619
QR++ I+ + A+ L+H I+H D+K +NILL T G + L F
Sbjct: 122 GQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL-----TTEGGVKLVDF---- 172
Query: 620 EPGTTAETASSSIGINGTVG---YVAPVIIA 647
G +A+ S+ + N +VG ++AP +IA
Sbjct: 173 --GVSAQLTSTRLRRNTSVGTPFWMAPEVIA 201
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 4e-04
Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 29/156 (18%)
Query: 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAA----EFNALRNIRH 527
+ N+I EG + +VY VA+K LK ++ F E N L ++H
Sbjct: 6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALK--KLKMEKEKEGFPITSLREINILLKLQH 63
Query: 528 RNLIKI--ITICSSID-------FEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEY 578
N++ + + + S++D + D K++ + ++ + + + + +
Sbjct: 64 PNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAH 121
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L + I+H DLK SN+LL+ + + D GLA+
Sbjct: 122 LHDN---WILHRDLKTSNLLLNNRGILKICDFGLAR 154
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 6e-04
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 1 NSSNNLLQYSKPLCILR-TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIP 59
N S N ++ + P + T L ++L N FNG IP +G+L SL L L+ NS S +P
Sbjct: 448 NLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVP 507
Query: 60 ANL 62
A L
Sbjct: 508 AAL 510
|
Length = 623 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 6e-04
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 34/152 (22%)
Query: 487 KIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAA-EFNALRNIRHRNLIKIIT 535
KI EG + +VY VA+K L+ E S A E + L+ + H N+++++
Sbjct: 6 KIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLD 65
Query: 536 ICSS-------IDFEGFDFK----AISNGQL--RLCNLSLTQRVNIAIDVAFAIEYLRHH 582
+ S +F D K + L L L Q + I Y H
Sbjct: 66 VVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQ-------GIAYCHSH 118
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
++H DLKP N+L+D++ + D GLA+
Sbjct: 119 ---RVLHRDLKPQNLLIDREGALKLADFGLAR 147
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 6e-04
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 15/81 (18%)
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGI 634
A+EYL H I+H DLKP NILLD+D+ + D G AK L + + +++I
Sbjct: 114 ALEYL-HSK--GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDS 170
Query: 635 N------------GTVGYVAP 643
GT YV+P
Sbjct: 171 QIEKNRRRFASFVGTAEYVSP 191
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 6e-04
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
L + IV+ DLKP NILLD + DLGLA + G GTV
Sbjct: 115 LEDLHRERIVYRDLKPENILLDDYGHIRISDLGLA---------VEIPEGETIRGRVGTV 165
Query: 639 GYVAPVII 646
GY+AP ++
Sbjct: 166 GYMAPEVV 173
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 6e-04
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 33/161 (20%)
Query: 507 KQKEASRSFAAEFNALRNIRHRNLIK-------------IITICSSIDFEGFDFKAISNG 553
K++E SR E L N++H N+++ ++ C EG D N
Sbjct: 41 KEREESRK---EVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC-----EGGDLYKKINA 92
Query: 554 QLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
Q R Q ++ + + A L+H I+H D+K NI L +D +GD G+A
Sbjct: 93 Q-RGVLFPEDQILDWFVQICLA---LKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIA 148
Query: 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENR 654
+ L +T E A + I GT Y++P I R N+
Sbjct: 149 RVL-----NSTVELARTCI---GTPYYLSPEICENRPYNNK 181
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 13/138 (9%)
Query: 487 KIREGGFNIVY-------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLI--KIITIC 537
++ G N VY + +K+ +E E L+ + + L K++
Sbjct: 5 LLKGGLTNRVYLLGTKDEDYVLKINP--SREKGADREREVAILQLLARKGLPVPKVLASG 62
Query: 538 SSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597
S + + I G+ L +S ++ +IA +A + L + HGDL P NI
Sbjct: 63 ESDGWSYLLMEWIE-GE-TLDEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNI 120
Query: 598 LLDQDVVTHVGDLGLAKF 615
L+D + + D A +
Sbjct: 121 LVDDGKILGIIDWEYAGY 138
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 7e-04
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
RL L L Q +A + AI+Y+ H + I+H D+K N+L++ +GD G A F
Sbjct: 253 RLRPLGLAQVTAVARQLLSAIDYI--HGE-GIIHRDIKTENVLVNGPEDICLGDFGAACF 309
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
G + + GI GTV AP ++A
Sbjct: 310 ARG------SWSTPFHYGIAGTVDTNAPEVLA 335
|
Length = 461 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 7e-04
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
IV+ DLKP NILLD + DLGLA + G GTVGY+AP +I
Sbjct: 123 IVYRDLKPENILLDDRGHIRISDLGLA---------VQIPEGETVRGRVGTVGYMAPEVI 173
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 9e-04
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 20/120 (16%)
Query: 515 FAAEFNALRNIRHRNLIKIITICSSID--------FEGFD----FKAISNGQLRLCNLSL 562
F E + + N H N++K++ +C + EG D + + L+L
Sbjct: 46 FLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTL 105
Query: 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL-----DQDVVTHVGDLGLAKFLY 617
+ ++I +DVA YL Q +H DL N L+ D D V +GD GLA+ +Y
Sbjct: 106 KELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIY 162
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 9e-04
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 559 NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
L L V ID+A +EYL + +H DL N +L++++ V D GL+K +Y
Sbjct: 109 TLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGLSKKIY 164
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.001
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 481 NFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAA-EFNALRNIRHRN 529
NF KI EG + +VY VA+K L + E S A E + L+ + H N
Sbjct: 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60
Query: 530 LIKIITICSS-------IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHH 582
++K++ + + +F D K + L + L + + + + H
Sbjct: 61 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SPLSGIPLPLIKSYLFQLLQGLAFCHSH 119
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
++H DLKP N+L++ + + D GLA+
Sbjct: 120 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR 148
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.001
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
L H +V+ DLKP+NILLD+ + DLGLA +P + GT
Sbjct: 110 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----------GTH 159
Query: 639 GYVAPVIIA 647
GY+AP ++
Sbjct: 160 GYMAPEVLQ 168
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.001
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 28/151 (18%)
Query: 487 KIREGGFNIVYNVAMK-VANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICS------ 538
+I++ G + + A+K + K+ R FA E L + H N+I ++ C
Sbjct: 27 RIKKDGLRM--DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84
Query: 539 -SIDFEG----FDF----------KAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHC 583
+I++ DF A + LS Q ++ A DVA ++YL
Sbjct: 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS--- 141
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
Q +H DL NIL+ ++ V + D GL++
Sbjct: 142 QKQFIHRDLAARNILVGENYVAKIADFGLSR 172
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.001
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A +V A+ +L H +++ DLK NILLD + + D G+ K G G T T
Sbjct: 102 AAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCK--EGILNGVTTTT- 155
Query: 629 SSSIGINGTVGYVAPVII 646
GT Y+AP I+
Sbjct: 156 -----FCGTPDYIAPEIL 168
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.001
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623
Q V + +A A++YL + I+H DLK N+ L + + VGDLG+A+ L
Sbjct: 103 QVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLE-----N 154
Query: 624 TAETASSSIGINGTVGYVAP 643
+ AS+ I GT Y++P
Sbjct: 155 QCDMASTLI---GTPYYMSP 171
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.001
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 579 LRHHCQPSIVHGDLKPSNILLDQ-DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGT 637
L H I+H DLK NILLD+ +V +GD G++K L + S + + GT
Sbjct: 114 LHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKIL---------SSKSKAYTVVGT 164
Query: 638 VGYVAPVIIAAR 649
Y++P + +
Sbjct: 165 PCYISPELCEGK 176
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.001
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Query: 518 EFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR------LCNLSLTQRVNIA 569
E LRN+ H N++K IC+ G + + +G L+ ++L Q++ A
Sbjct: 56 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYA 115
Query: 570 IDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+ + ++YL VH DL N+L++ + +GD GL K
Sbjct: 116 VQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 157
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 38/153 (24%)
Query: 487 KIREGGFNIVY--------NVAMK------VANLKQKEASRSFAAEFNALRNIRHRNLIK 532
KI +G F VY VA+K +LK+K F E L+ H N++K
Sbjct: 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRK-----FLQEAEILKQYDHPNIVK 56
Query: 533 IITICSS-----IDFE---GFDFKAI---SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRH 581
+I +C I E G +L + L + +++D A +EYL
Sbjct: 57 LIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKL-----LQMSLDAAAGMEYLES 111
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H DL N L+ ++ V + D G+++
Sbjct: 112 KN---CIHRDLAARNCLVGENNVLKISDFGMSR 141
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
++IAI +A +EYL H VH DL N L+ + + + D GL++ +Y
Sbjct: 127 LHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGLTVKISDFGLSRDIY 175
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 30/137 (21%)
Query: 496 VYNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKIITICSS-----IDFEGFDF 547
+VA+K+ +E + S F E + + H NL+++ +C+ I E
Sbjct: 28 KIDVAIKMI----REGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE---- 79
Query: 548 KAISNGQLRLCNLSLTQR--------VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
++NG L N ++ +++ DV A+EYL + +H DL N L+
Sbjct: 80 -YMANGCLL--NYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLV 133
Query: 600 DQDVVTHVGDLGLAKFL 616
+D V V D GLA+++
Sbjct: 134 GEDNVVKVSDFGLARYV 150
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.001
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 15/128 (11%)
Query: 499 VAMKVANLKQKEASRSFAA---EFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL 555
VA+K ++ + ++F A+ ++ H +++++ IC + + G L
Sbjct: 39 VAIKT--IQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQ-LVTQLSPLGSL 95
Query: 556 ------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGD 609
+L + +N + +A + YL H +VH +L NILL D + + D
Sbjct: 96 LDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIAD 152
Query: 610 LGLAKFLY 617
G+A LY
Sbjct: 153 FGVADLLY 160
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.002
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A ++ +++L I++ DLK N+LLD + + D G+ K G G T T
Sbjct: 102 AAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCK--EGILGGVTTST- 155
Query: 629 SSSIGINGTVGYVAPVIIA 647
GT Y+AP I++
Sbjct: 156 -----FCGTPDYIAPEILS 169
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.002
Identities = 39/163 (23%), Positives = 61/163 (37%), Gaps = 39/163 (23%)
Query: 480 NNFSPANKIREGGFNIVY-----NVAMKVANLKQKEAS------RSFAAEFNALRNIRHR 528
N + + EG + +V VA K KE+ ++ E LR +RH
Sbjct: 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHE 60
Query: 529 NLIKIITICSS-----IDFEGFD------FKAISNG----QLRLCNLSLTQRVNIAIDVA 573
N++ + + FE + +A G +R L Q
Sbjct: 61 NIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQ--------- 111
Query: 574 FAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
AI Y H +I+H D+KP NIL+ + V + D G A+ L
Sbjct: 112 -AIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARAL 150
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 45/172 (26%)
Query: 487 KIREGGFNIVYN---------VAMKVANLKQKEASRSFAA--EFNALRNIRHRNLIKIIT 535
K+ EG + VY VA+KV ++K +E F A E + L+ ++H N++ +
Sbjct: 12 KLGEGSYATVYKGISRINGQLVALKVISMKTEEGV-PFTAIREASLLKGLKHANIVLLHD 70
Query: 536 ICSSIDFEGFDFKAISN----------GQLRLCNLSLTQRVNIAIDVAFAIEYLR----- 580
I + + F F+ + G L N+ L F + LR
Sbjct: 71 IIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRL-----------FMFQLLRGLAYI 119
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSI 632
H I+H DLKP N+L ++++G+L LA F ++T SS +
Sbjct: 120 HG--QHILHRDLKPQNLL-----ISYLGELKLADFGLARAKSIPSQTYSSEV 164
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.002
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624
RV IA ++ A+++L Q I++ D+K NILLD + + D GL+K
Sbjct: 108 RVYIA-EIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEF-------L 156
Query: 625 AETASSSIGINGTVGYVAPVII 646
AE + GT+ Y+AP +I
Sbjct: 157 AEEEERAYSFCGTIEYMAPEVI 178
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.002
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A ++ A+ +L + I++ DLK N+LLD D + D G+ K G PG T T
Sbjct: 102 AAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCK--EGLGPGDTTST- 155
Query: 629 SSSIGINGTVGYVAPVII 646
GT Y+AP I+
Sbjct: 156 -----FCGTPNYIAPEIL 168
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.003
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+++L H IVH DLKP NIL+ D + D GLA+ +Y +E
Sbjct: 119 GVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLAR-IYSFE 160
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.003
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+E+L + IV+ DLKP NILLD + D GL+K T ++
Sbjct: 104 ELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSK------ANLTDNKTTN 154
Query: 631 SIGINGTVGYVAPVII 646
+ GT Y+AP ++
Sbjct: 155 TFC--GTTEYLAPEVL 168
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.003
Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 22/182 (12%)
Query: 499 VAMKVANLKQKEASRS-FAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL-- 555
VA+K E R F +E + + H N+I++ + + + + NG L
Sbjct: 36 VAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDK 95
Query: 556 ----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611
S Q V + +A ++YL + VH DL NIL++ ++ V D G
Sbjct: 96 YLRDHDGEFSSYQLVGMLRGIAAGMKYL---SDMNYVHRDLAARNILVNSNLECKVSDFG 152
Query: 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHT-------VMSFP 664
L++ L +P T T+ I I T AP IA R + + VMSF
Sbjct: 153 LSRVLED-DPEGTYTTSGGKIPIRWT----APEAIAYRKFTSASDVWSFGIVMWEVMSFG 207
Query: 665 QR 666
+R
Sbjct: 208 ER 209
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.003
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 518 EFNALRNIRHRNLIKIIT-------ICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAI 570
E + I+H N++ ++ I +D D K + + ++RL + +Q I +
Sbjct: 70 ELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIRL---TESQVKCILL 126
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621
+ + L H +H DL P+NI ++ + + D GLA+ YGY P
Sbjct: 127 QILNGLNVL-HKW--YFMHRDLSPANIFINSKGICKIADFGLAR-RYGYPP 173
|
Length = 335 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 40.5 bits (94), Expect = 0.003
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 528 RNLIKIITICS-SIDFEGF-DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------ 579
+N+I ++ + + E F D + + L + +L Q + + +D + YL
Sbjct: 76 KNIISLLNVFTPQKSLEEFQDVYLV----MELMDANLCQVIQMELDHE-RMSYLLYQMLC 130
Query: 580 --RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H I+H DLKPSNI++ D + D GLA+
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.003
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 567 NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
NI D+ +EY+ H I HGD+KP NI++D + ++ D G+A
Sbjct: 130 NIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDYGIASHF 176
|
Length = 294 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.003
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 10/76 (13%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A++YL H + ++V+ DLK N++LD+D + D GL K G + G T +T
Sbjct: 103 EIVSALDYL--HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKT--- 155
Query: 631 SIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 156 ---FCGTPEYLAPEVL 168
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.003
Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 37/161 (22%)
Query: 488 IREGGFNIVYNVAMKVANLKQKEA------------SRSFAAEFNALRNI-RHRNLIKII 534
I EG F V +K LK A R FA E L + H N+I ++
Sbjct: 10 IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLL 69
Query: 535 TICS-------SIDFEGF----DF----------KAISNGQLRLCNLSLTQRVNIAIDVA 573
C +I++ + DF A + L+ Q + A DVA
Sbjct: 70 GACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVA 129
Query: 574 FAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
++YL + +H DL N+L+ +++ + + D GL++
Sbjct: 130 TGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLSR 167
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.003
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
L H +V+ DLKP+NILLD+ + DLGLA +P + GT
Sbjct: 110 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----------GTH 159
Query: 639 GYVAPVII 646
GY+AP ++
Sbjct: 160 GYMAPEVL 167
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.003
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++A A+++L H I++ DLKP NILLD++ + D GL+K E + A S
Sbjct: 106 ELALALDHL-HSL--GIIYRDLKPENILLDEEGHIKLTDFGLSK-----ESIDHEKKAYS 157
Query: 631 SIGINGTVGYVAPVIIAAR 649
GTV Y+AP ++ R
Sbjct: 158 ---FCGTVEYMAPEVVNRR 173
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.004
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 19 FLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNL 78
F+ + L N G G IP+ I +L L+ + LS NS IP +L S ++L L N+
Sbjct: 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSF 478
Query: 79 VRDILTEICSLFKLERLRIDCGGRI-DSLGHLKSLLLLSLAFNQFLS 124
G I +SLG L SL +L+L N LS
Sbjct: 479 ---------------------NGSIPESLGQLTSLRILNLNGN-SLS 503
|
Length = 623 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.004
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L Q + + +D + YL
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H I+H DLKPSNI++ D + D GLA+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.004
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 20/151 (13%)
Query: 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAA-EFNALRNIRHRNL 530
NF K+ EG + VY VA+K +L +E + S A E + ++ ++H N+
Sbjct: 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI 60
Query: 531 IKIITICSSID-----FEGF--DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHC 583
+++ + + + FE D K + L + + I + +
Sbjct: 61 VRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN- 119
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
++H DLKP N+L+++ + D GLA+
Sbjct: 120 --RVLHRDLKPQNLLINKRGELKLADFGLAR 148
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.004
Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 44/190 (23%)
Query: 481 NFSPANKIREGGFNIVYN---------VAMK---VANLKQKEASRSFAAEFNALRNIRHR 528
NF KI G F+ VY VA+K + +L +A E + L+ + H
Sbjct: 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62
Query: 529 NLIK-------------IITICSSIDFEGF--DFKAISNGQLRLCNLSLTQRVNIAIDVA 573
N+IK ++ + + D FK Q RL + + + A
Sbjct: 63 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKK----QKRLIPEKTVWKYFVQLCSA 118
Query: 574 FAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIG 633
L H ++H D+KP+N+ + V +GDLGL +F ++ TA+ S
Sbjct: 119 -----LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF------SSKTTAAHS-- 165
Query: 634 INGTVGYVAP 643
+ GT Y++P
Sbjct: 166 LVGTPYYMSP 175
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.004
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 46/201 (22%)
Query: 481 NFSPANKIREGGFNIVYNVAMKVAN--------------LKQKEASRSFAAEFNALRNIR 526
+ KI EG F +Y K + +K+KEAS+ E L ++
Sbjct: 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKK---EVILLAKMK 57
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNL-SLTQRVNIAIDVAFAIEY------- 578
H N I+T +S G F + C+ L +R+N V F+ +
Sbjct: 58 HPN---IVTFFASFQENGRLFIV-----MEYCDGGDLMKRINRQRGVLFSEDQILSWFVQ 109
Query: 579 ----LRHHCQPSIVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEPGTTAETASSSIG 633
L+H I+H D+K NI L ++ +V +GD G+A+ L + E A + +
Sbjct: 110 ISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQL-----NDSMELAYTCV- 163
Query: 634 INGTVGYVAPVIIAARNLENR 654
GT Y++P I R N+
Sbjct: 164 --GTPYYLSPEICQNRPYNNK 182
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.004
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Query: 501 MKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC-SSIDFEGFDFKAI-----SNGQ 554
MK+A + E F +E ++ H N++++I +C +++ EG+ + +G
Sbjct: 34 MKIAICTRSEM-EDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGD 92
Query: 555 L-------RL--CNLSLTQR--VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
L RL C L + V D+A +EYL S +H DL N +L++++
Sbjct: 93 LHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENM 149
Query: 604 VTHVGDLGLAKFLYG---YEPGTTAETASSSIGI 634
V D GL+K +Y Y G A+ I I
Sbjct: 150 NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.004
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 20/133 (15%)
Query: 497 YNVAMKVANLKQKEASRSFAA---EFNALRNIRHRNLIKI--------ITICSSIDFEG- 544
YN KVA K S S A E N ++ ++H L+K+ I I + +G
Sbjct: 27 YNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGS 86
Query: 545 -FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF G L + ++ + +A + ++ Q + +H DL+ +NIL+ +
Sbjct: 87 LLDFLKSDEGS----KQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASL 139
Query: 604 VTHVGDLGLAKFL 616
V + D GLA+ +
Sbjct: 140 VCKIADFGLARVI 152
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.004
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
++IAI +A +EYL H VH DL NIL+ + + + DLGL++ +Y
Sbjct: 127 LHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQLHVKISDLGLSREIY 175
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 746 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.98 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.98 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.98 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.98 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.98 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.98 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.98 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.98 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.98 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.97 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.97 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.97 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.97 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.97 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.97 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.97 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.97 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.97 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.97 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.97 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.97 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.97 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.97 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.97 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.97 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.97 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.97 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.97 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.97 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.97 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.97 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.97 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.97 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.97 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.97 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.97 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.97 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.97 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.97 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.97 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.97 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.97 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.97 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.97 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.97 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.97 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.97 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.97 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.97 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.97 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.97 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.97 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.97 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.97 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.97 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.97 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.97 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.96 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.96 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.96 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.96 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.96 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.96 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.96 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.96 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.96 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.96 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.96 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.96 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.96 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.96 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.96 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.96 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.96 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.96 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.96 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.96 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.96 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.96 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.96 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.96 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.96 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.96 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.96 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.96 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.96 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.96 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.96 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.96 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.96 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.96 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.96 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.96 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.96 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.96 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.96 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.96 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.96 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.96 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.96 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.96 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.96 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.96 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.96 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.96 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.96 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.95 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.95 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.95 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.95 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.95 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.95 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.95 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.95 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.95 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.95 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.95 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.95 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.95 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.95 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.95 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.95 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.95 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.95 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.95 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.95 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.95 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.95 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.95 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.95 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.95 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.95 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.95 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.95 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.95 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.95 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.95 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.95 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.95 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.95 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.95 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.95 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.95 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.95 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.95 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.95 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.95 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.95 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.95 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.95 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.95 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.95 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.95 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.95 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.95 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.95 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.95 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.95 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.95 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.94 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.94 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.94 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.94 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.94 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.94 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.94 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.94 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.94 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.94 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.94 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.94 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.94 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.94 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.94 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.94 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.94 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.94 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.94 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.94 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.94 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.94 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.94 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.94 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.94 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.94 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.94 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.94 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.94 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.94 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.94 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.94 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.93 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.93 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.93 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.93 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.93 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.93 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.93 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.93 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.93 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.93 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.93 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.93 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.93 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.93 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.93 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.93 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.93 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.93 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.93 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.93 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.93 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.92 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.92 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.92 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.92 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.92 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.92 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.91 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.9 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.9 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.9 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.9 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.89 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.88 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.88 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.88 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.88 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.88 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.87 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.87 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.87 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.87 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.85 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.85 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.83 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.83 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.82 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.81 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.81 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.76 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.76 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.75 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.75 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.74 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.74 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.73 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.72 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.72 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.71 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.71 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.71 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.69 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.68 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.67 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.67 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.63 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.61 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.59 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.59 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.58 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.58 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.56 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.55 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.53 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.5 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.47 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.47 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.46 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.44 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.43 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.43 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.4 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.34 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.32 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.31 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.24 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.15 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.14 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.08 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.07 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.05 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.05 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.02 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.01 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.0 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.98 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.96 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.96 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.94 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.93 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 98.93 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.89 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.88 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.83 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.8 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.79 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.74 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 98.72 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 98.69 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.64 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.58 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 98.58 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.49 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.46 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.35 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.35 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.35 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.31 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 98.27 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.22 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.12 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.11 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.08 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.06 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 98.04 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.01 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-80 Score=751.58 Aligned_cols=688 Identities=23% Similarity=0.338 Sum_probs=485.8
Q ss_pred CCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 4 n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
|.+....++.+..+++|++|+|++|.+.+.+|..++++++|++|+|++|.+++.+|..|+++++|++|++++|++.+.+|
T Consensus 174 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p 253 (968)
T PLN00113 174 NVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIP 253 (968)
T ss_pred CcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccC
Confidence 33433444455567888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred hhhcCCCCCCEEEccCCCC----cCcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCC
Q 041467 84 TEICSLFKLERLRIDCGGR----IDSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKN 154 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~~----~~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 154 (746)
..++++++|+.|+++.+.. +..+.++++|+.|+|++|++. .+.++++|+.|++++|.+++..|..+..+++
T Consensus 254 ~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~ 333 (968)
T PLN00113 254 SSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPR 333 (968)
T ss_pred hhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCC
Confidence 8888888888888877542 346777888888888888773 2456777888888888877777777777777
Q ss_pred CCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcc-----------------------cccc
Q 041467 155 LSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLS-----------------------STIK 211 (746)
Q Consensus 155 L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-----------------------~~L~ 211 (746)
|+.|+|++|.+.+ ..|..++.+++|+.|++++|++++.+|..+..+. .+|+
T Consensus 334 L~~L~L~~n~l~~------~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~ 407 (968)
T PLN00113 334 LQVLQLWSNKFSG------EIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLR 407 (968)
T ss_pred CCEEECcCCCCcC------cCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCC
Confidence 8888877777765 3444455555566666655555555555544443 1455
Q ss_pred eEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccc--cccChHHhhhccC
Q 041467 212 QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSL--GNLTLQTYLFNNL 289 (746)
Q Consensus 212 ~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l--~~l~~l~~l~n~l 289 (746)
.|++++|++++.+|..|.++++|+.|++++|++.+.+|..+..+++|+.|+|++|++.+.+|..+ .+|+.|++.+|++
T Consensus 408 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l 487 (968)
T PLN00113 408 RVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQF 487 (968)
T ss_pred EEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCcc
Confidence 55555555555555555555555555555555555555555555666666666666655555443 3456666778899
Q ss_pred CCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeec---------CCC
Q 041467 290 QGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI---------PEY 360 (746)
Q Consensus 290 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l---------p~~ 360 (746)
.+.+|..|.++++|+.|+|++|++++.+|..+..+.+| +.|+|++|.++|.+|..++++++|+.|++ |..
T Consensus 488 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 566 (968)
T PLN00113 488 SGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKL-VSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKN 566 (968)
T ss_pred CCccChhhhhhhccCEEECcCCcceeeCChHHcCccCC-CEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChh
Confidence 99999999999999999999999999999999999999 68999999999999999999999999864 666
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCCcCCCCCCCCCCccCCCCCCCCcccceeeeechhhhhhhhh
Q 041467 361 PENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYKGSIKPSITSLKVLIPVIVSCLILL 440 (746)
Q Consensus 361 ~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~ 440 (746)
+..+++|+.|++++|+++|.+|..+.+.++....+.||+.+||..+....+.|......+ ....+++.+++++++++
T Consensus 567 l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~---~~~~~~~~~~~~~~~~~ 643 (968)
T PLN00113 567 LGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTP---SWWFYITCTLGAFLVLA 643 (968)
T ss_pred HhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccc---eeeeehhHHHHHHHHHH
Confidence 678889999999999999999988888888888889999999976554556674321111 11111111122222211
Q ss_pred e-eeeEEEecccCCC--CC-Cc-cccccccc-----CCcccHHHHhhhhcCCCCCCeEeecCCeeEEE---------EEe
Q 041467 441 V-ISFIFYARRKKPA--HK-DS-NMLSMKQQ-----FPMISHAELSKATNNFSPANKIREGGFNIVYN---------VAM 501 (746)
Q Consensus 441 ~-~~~~~~~~~~~~~--~~-~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ig~g~~g~v~~---------vav 501 (746)
+ +++++++|+++.. ++ .. ........ ...++.+ .....|...+.||+|+||.||+ |||
T Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vav 720 (968)
T PLN00113 644 LVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITIN---DILSSLKEENVISRGKKGASYKGKSIKNGMQFVV 720 (968)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccchhhhHH---HHHhhCCcccEEccCCCeeEEEEEECCCCcEEEE
Confidence 1 1112222222211 10 00 00000000 0112222 2334677889999999999997 899
Q ss_pred ehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHH
Q 041467 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYL 579 (746)
Q Consensus 502 K~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yL 579 (746)
|++..... ...+|++++++++|||||+++|+|.+.+..++||||+++|++. ...++|.++.+++.|||+|++||
T Consensus 721 K~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yL 796 (968)
T PLN00113 721 KEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFL 796 (968)
T ss_pred EEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 98753221 2345789999999999999999999999999999999999987 34689999999999999999999
Q ss_pred HhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccc
Q 041467 580 RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHT 659 (746)
Q Consensus 580 H~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~D 659 (746)
|+.+.++|+|||+||+||+++.++.+++. ||.+..... .....||+.|||||++.+..++.+ +|
T Consensus 797 H~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~---sD 860 (968)
T PLN00113 797 HCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT------------DTKCFISSAYVAPETRETKDITEK---SD 860 (968)
T ss_pred ccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc------------CCCccccccccCcccccCCCCCcc---cc
Confidence 98777799999999999999999988886 666544311 112468899999999988777554 99
Q ss_pred eeeccceeeccccccc---------cchh----------------hcc----ccCCCccHHHHHHhhCCCCCCCCC-CCC
Q 041467 660 VMSFPQRFALNEKKQN---------KSIL----------------KSA----GIKGKKTVSFFLSLLSPSCSVFPL-TPS 709 (746)
Q Consensus 660 iwSlG~i~~~~~~~~~---------~~i~----------------~~~----~~~~~~~~~~~~~~~~~~~~~~p~-~p~ 709 (746)
||||||++|....... ..+. +.. ..........+..++..|+...|+ ||+
T Consensus 861 v~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt 940 (968)
T PLN00113 861 IYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPC 940 (968)
T ss_pred hhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcC
Confidence 9999999982211110 0000 000 000112223455677778888888 999
Q ss_pred ccchhhhcccCCCCC
Q 041467 710 SNSFTLLGLRLPSRS 724 (746)
Q Consensus 710 ~~~~~~~~~~~~~~~ 724 (746)
+.++...++++....
T Consensus 941 ~~evl~~L~~~~~~~ 955 (968)
T PLN00113 941 ANDVLKTLESASRSS 955 (968)
T ss_pred HHHHHHHHHHhhccc
Confidence 999887777765433
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-44 Score=434.47 Aligned_cols=395 Identities=30% Similarity=0.403 Sum_probs=316.9
Q ss_pred CCCccc-ccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCc
Q 041467 3 SNNLLQ-YSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRD 81 (746)
Q Consensus 3 ~n~~~~-~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 81 (746)
++|..+ ..+..+..+++|++|+|++|.+.+.+|..|+++++|++|+|++|.+++.+|..|+++++|+.|+|++|++.+.
T Consensus 148 s~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 227 (968)
T PLN00113 148 SNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGE 227 (968)
T ss_pred cCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCc
Confidence 344433 3344456689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhcCCCCCCEEEccCCC----CcCcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCC
Q 041467 82 ILTEICSLFKLERLRIDCGG----RIDSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRL 152 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~----~~~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 152 (746)
+|..++++++|++|++++|. .+..++++++|+.|+|++|++. .+.++++|+.|+|++|++++.+|..+..+
T Consensus 228 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l 307 (968)
T PLN00113 228 IPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQL 307 (968)
T ss_pred CChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCC
Confidence 99999999999999999864 3467899999999999999984 46688999999999999999999999999
Q ss_pred CCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCC
Q 041467 153 KNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLV 232 (746)
Q Consensus 153 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~ 232 (746)
++|+.|++++|.+.+ ..|..+..+++|+.|++++|.+++.+|..++.+. +|+.|++++|++++.+|.++..+.
T Consensus 308 ~~L~~L~l~~n~~~~------~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~-~L~~L~Ls~n~l~~~~p~~~~~~~ 380 (968)
T PLN00113 308 QNLEILHLFSNNFTG------KIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHN-NLTVLDLSTNNLTGEIPEGLCSSG 380 (968)
T ss_pred CCCcEEECCCCccCC------cCChhHhcCCCCCEEECcCCCCcCcCChHHhCCC-CCcEEECCCCeeEeeCChhHhCcC
Confidence 999999999999987 5667789999999999999999999999999987 799999999999988888877777
Q ss_pred CCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccCh---HHhhhccCCCCCCccccC----------
Q 041467 233 NLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTL---QTYLFNNLQGNIPSSLAN---------- 299 (746)
Q Consensus 233 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~---l~~l~n~l~~~~p~~~~~---------- 299 (746)
+|+.|++++|++.+.+|..++.+++|+.|++++|++++..|..+..+.. +++.+|++.+.+|..+..
T Consensus 381 ~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 460 (968)
T PLN00113 381 NLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLA 460 (968)
T ss_pred CCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECc
Confidence 7777777777777666666666666666666666666655554443332 223344444444443333
Q ss_pred -------------CCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeec---------
Q 041467 300 -------------CKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI--------- 357 (746)
Q Consensus 300 -------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l--------- 357 (746)
.++|+.|++++|++++.+|..+..+..+ ..|+|++|++++.+|..++++++|+.|++
T Consensus 461 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 539 (968)
T PLN00113 461 RNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSEL-MQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQI 539 (968)
T ss_pred CceeeeecCcccccccceEEECcCCccCCccChhhhhhhcc-CEEECcCCcceeeCChHHcCccCCCEEECCCCcccccC
Confidence 3556667777777777777777777777 57888888888888888888888888854
Q ss_pred CCCCCCCCCCCEEEccCCcCcccCCCC-CccCCCCeeeEecCCCcCCCCC
Q 041467 358 PEYPENLSFFELLNLSYNYFGSEVPTK-GVFNNKTRFSIIGNGKLCGGLD 406 (746)
Q Consensus 358 p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~l~~~~~ 406 (746)
|..+..++.|+.||+++|+++|.+|.. ..+..+..+++.+|+ +.|.++
T Consensus 540 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~-l~~~~p 588 (968)
T PLN00113 540 PASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNH-LHGSLP 588 (968)
T ss_pred ChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCc-ceeeCC
Confidence 455677888888888888888888853 335567777777775 444333
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=341.87 Aligned_cols=177 Identities=25% Similarity=0.452 Sum_probs=159.0
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
...++|+..+.||+|+||+||+ ||||.+.++ .++..+.+..|+++|+.++|||||+++++++.++..|+
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 3567899999999999999997 999999877 45566778999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC------CcEEEccccccc
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD------VVTHVGDLGLAK 614 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~------~~~ki~DfGla~ 614 (746)
|||||.+|+|. ...+++..++.++.|+|.|+++||++ +||||||||+||||+.. -.+||+|||+||
T Consensus 87 VMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 99999999996 55899999999999999999999999 99999999999999754 468999999999
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.+.. .....+.+|++.|||||+++..+|+.+ +|+||+|+|+|
T Consensus 164 ~L~~---------~~~a~tlcGSplYMAPEV~~~~~YdAK---ADLWSiG~Ily 205 (429)
T KOG0595|consen 164 FLQP---------GSMAETLCGSPLYMAPEVIMSQQYDAK---ADLWSIGTILY 205 (429)
T ss_pred hCCc---------hhHHHHhhCCccccCHHHHHhccccch---hhHHHHHHHHH
Confidence 9842 223345899999999999998888766 99999999999
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=340.02 Aligned_cols=178 Identities=25% Similarity=0.383 Sum_probs=155.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhh-------hhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE-------ASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~-------~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
.+.|...+.+|+|+||.|-. ||||++.++... ......+|+++|++++|||||+++++|...++
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 45678899999999999974 999999765311 12346799999999999999999999999999
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC---CcEEEccccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD---VVTHVGDLGLAK 614 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~---~~~ki~DfGla~ 614 (746)
.|+||||+.+|+|. ...+.+...+.+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+|||+|+
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred eEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccchhh
Confidence 99999999999986 56788889999999999999999999 99999999999999654 889999999999
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ..+.+.+.|||+.|.|||++.+..+..+..++||||+|||+|
T Consensus 328 ~~g---------~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLf 372 (475)
T KOG0615|consen 328 VSG---------EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLF 372 (475)
T ss_pred ccc---------cceehhhhcCCccccChhheecCCeecccchheeeeccceEE
Confidence 863 235566799999999999999887766666899999999999
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=353.49 Aligned_cols=192 Identities=36% Similarity=0.543 Sum_probs=167.2
Q ss_pred cCCcccHHHHhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEE
Q 041467 466 QFPMISHAELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537 (746)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~ 537 (746)
....|+++++..+|++|...+.||+|+||.||+ ||||++........++|..|+.++.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 456789999999999999999999999999997 999987654332145699999999999999999999999
Q ss_pred ecCCc-ccchhhhccCCccc------cc-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcc
Q 041467 538 SSIDF-EGFDFKAISNGQLR------LC-NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGD 609 (746)
Q Consensus 538 ~~~~~-~~lv~e~~~~g~l~------~~-~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 609 (746)
.+.+. ..+|+|||++|+|. .. .++|.+|.+||.++|+||+|||+.+.|+||||||||+|||+|+++.+||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 99985 99999999999996 22 789999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCcccccccccc-cccccccccccccccccccCCCccceeeccceee
Q 041467 610 LGLAKFLYGYEPGTTAETASSSIGI-NGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 610 fGla~~~~~~~~~~~~~~~~~~~~~-~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
||+|+...... ...... .||.+|+|||++.....+.+ +|||||||++.
T Consensus 221 FGLa~~~~~~~--------~~~~~~~~gt~gY~~PEy~~~g~lt~K---sDVySFGVvll 269 (361)
T KOG1187|consen 221 FGLAKLGPEGD--------TSVSTTVMGTFGYLAPEYASTGKLTEK---SDVYSFGVVLL 269 (361)
T ss_pred ccCcccCCccc--------cceeeecCCCCccCChhhhccCCcCcc---cccccchHHHH
Confidence 99997653210 111112 79999999999998777666 99999999885
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=329.75 Aligned_cols=217 Identities=19% Similarity=0.237 Sum_probs=172.5
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc-ccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF-EGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~-~~lv~e 548 (746)
++.+....||+|..|+||| +|+|++... +....+++.+|++++++++|||||++||+|+..+. ..++||
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 3455678999999999998 799999544 34456789999999999999999999999999995 999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
||.+|+|+ ...+++...-+|+.+|++||.|||+.. +||||||||+|||++..|++||||||+++.+...
T Consensus 159 YMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---- 232 (364)
T KOG0581|consen 159 YMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---- 232 (364)
T ss_pred hcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccccHHhhhh----
Confidence 99999997 356999999999999999999999732 9999999999999999999999999999987432
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeec----------------cccccccchhhcc-ccCC
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFAL----------------NEKKQNKSILKSA-GIKG 686 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~----------------~~~~~~~~i~~~~-~~~~ 686 (746)
...+++||..|||||.+.+..|+.. +||||||..+.. ...+....|.... |...
T Consensus 233 ------~a~tfvGT~~YMsPERi~g~~Ys~~---sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP 303 (364)
T KOG0581|consen 233 ------IANTFVGTSAYMSPERISGESYSVK---SDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLP 303 (364)
T ss_pred ------hcccccccccccChhhhcCCcCCcc---cceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCC
Confidence 3356899999999999999988766 999999987761 1122233344322 2222
Q ss_pred C-ccHHHHHHhhCCCCCCCCC-CCCcc
Q 041467 687 K-KTVSFFLSLLSPSCSVFPL-TPSSN 711 (746)
Q Consensus 687 ~-~~~~~~~~~~~~~~~~~p~-~p~~~ 711 (746)
. .+.+.+.+.++.|..+.|. ||+..
T Consensus 304 ~~~fS~ef~~FV~~CL~Kdp~~R~s~~ 330 (364)
T KOG0581|consen 304 EGEFSPEFRSFVSCCLRKDPSERPSAK 330 (364)
T ss_pred cccCCHHHHHHHHHHhcCCcccCCCHH
Confidence 2 3555566666666555555 66555
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=348.84 Aligned_cols=213 Identities=21% Similarity=0.291 Sum_probs=176.8
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.+|+..+.||+|||+.||. ||+|++.++ +....+...+||++.+.++|||||+++++|++.++.|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5799999999999999997 999999765 3445677999999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+|++|++. ...+++.+++.+++||+.|+.|||+. +|+|||||-.|++++++.++||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~--- 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD--- 171 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc---
Confidence 999999985 57899999999999999999999999 9999999999999999999999999999887432
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-------ccccchhh-----ccccC---CC
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-------KQNKSILK-----SAGIK---GK 687 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-------~~~~~i~~-----~~~~~---~~ 687 (746)
.....+.||||.|+|||++....++.- +||||+|||||..-. +..++++. .+..| +.
T Consensus 172 -----~Erk~TlCGTPNYIAPEVl~k~gHsfE---vDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~ 243 (592)
T KOG0575|consen 172 -----GERKKTLCGTPNYIAPEVLNKSGHSFE---VDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSA 243 (592)
T ss_pred -----ccccceecCCCcccChhHhccCCCCCc---hhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCH
Confidence 234456899999999999997777554 999999999992211 11223322 12222 24
Q ss_pred ccHHHHHHhhCCCCCCCCC
Q 041467 688 KTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~ 706 (746)
+..++|.++++++|..||.
T Consensus 244 ~A~dLI~~lL~~~P~~Rps 262 (592)
T KOG0575|consen 244 EAKDLIRKLLRPNPSERPS 262 (592)
T ss_pred HHHHHHHHHhcCCcccCCC
Confidence 4557788888887775553
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=342.01 Aligned_cols=206 Identities=24% Similarity=0.303 Sum_probs=178.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccccc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~~l 545 (746)
.+.|+.++.||+|.||.||+ ||+|++.... .+......|||.+|++++|||||+|.+...+. ..+|+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 45688899999999999998 9999998765 44566788999999999999999999998886 68999
Q ss_pred hhhhccC---Cccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISN---GQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~---g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||||+. |.+. ...+++.++..++.|++.||+|+|++ +|+|||||.+|||||.+|.+||+|||+|+.+....
T Consensus 196 VFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 196 VFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred EEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 9999964 3333 45799999999999999999999999 99999999999999999999999999999875433
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee-----------ccccccccchhhccccCCCcc
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA-----------LNEKKQNKSILKSAGIKGKKT 689 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~-----------~~~~~~~~~i~~~~~~~~~~~ 689 (746)
. ...+..+-|.||+|||++.|.. .|+.++|+||.||||+ ..+.+|+..|+...|.|.++.
T Consensus 273 ~-------~~~T~rVvTLWYRpPELLLG~t--~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~ 343 (560)
T KOG0600|consen 273 S-------APYTSRVVTLWYRPPELLLGAT--SYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDY 343 (560)
T ss_pred C-------cccccceEEeeccChHHhcCCc--ccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhc
Confidence 2 2356678899999999999873 3566799999999998 678888999999999999999
Q ss_pred HHHHHHhh
Q 041467 690 VSFFLSLL 697 (746)
Q Consensus 690 ~~~~~~~~ 697 (746)
|+ ...+.
T Consensus 344 W~-~~kLP 350 (560)
T KOG0600|consen 344 WP-VSKLP 350 (560)
T ss_pred cc-cccCC
Confidence 88 55555
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=318.89 Aligned_cols=177 Identities=21% Similarity=0.304 Sum_probs=154.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++.|+....+|+|+||.||| ||||++.... ....+-..||+++|++++|||+|.++++|......++||
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 35788899999999999998 9999986543 333456789999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|||...-|. ...++...+.++++|+++|+.|+|++ +||||||||+||||+.+|.+|+||||+||.+..
T Consensus 81 E~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~---- 153 (396)
T KOG0593|consen 81 EYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA---- 153 (396)
T ss_pred eecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC----
Confidence 999766553 45689999999999999999999999 999999999999999999999999999998843
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+.++.|.||+|||++.+. ++|++++||||+||+++
T Consensus 154 ----pgd~YTDYVATRWYRaPELLvGD--tqYG~pVDiWAiGCv~a 193 (396)
T KOG0593|consen 154 ----PGDNYTDYVATRWYRAPELLVGD--TQYGKPVDIWAIGCVFA 193 (396)
T ss_pred ----CcchhhhhhhhhhccChhhhccc--CcCCCcccchhhhHHHH
Confidence 23445679999999999999986 33566799999999998
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=313.96 Aligned_cols=208 Identities=22% Similarity=0.281 Sum_probs=180.3
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.+|...+.+|+|.||.||+ ||||+++.... .......|||+.|+.++|||||.++++|-+.+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4688899999999999997 99999976542 224568899999999999999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+.. |+ ...++..++..++.++.+|++|+|.+ .|+||||||.|+|++.+|.+||+|||+|+.+......
T Consensus 82 fm~td-Le~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 82 FMPTD-LEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred ecccc-HHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 99743 32 45689999999999999999999999 9999999999999999999999999999987543321
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee-----------ccccccccchhhccccCCCccHH
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA-----------LNEKKQNKSILKSAGIKGKKTVS 691 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~-----------~~~~~~~~~i~~~~~~~~~~~~~ 691 (746)
.+..+-|.||+|||++.|..- |+..+||||.||||+ ..+.+|...|++..|+|.++.|+
T Consensus 158 --------~~~~V~TRWYRAPELLfGsr~--Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP 227 (318)
T KOG0659|consen 158 --------QTHQVVTRWYRAPELLFGSRQ--YGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWP 227 (318)
T ss_pred --------cccceeeeeccChHHhccchh--cCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCc
Confidence 122367999999999997643 344599999999998 67889999999999999999999
Q ss_pred HHHHhhCCCC
Q 041467 692 FFLSLLSPSC 701 (746)
Q Consensus 692 ~~~~~~~~~~ 701 (746)
.+.++.++..
T Consensus 228 ~~~~lpdY~~ 237 (318)
T KOG0659|consen 228 EMTSLPDYVK 237 (318)
T ss_pred cccccccHHH
Confidence 9999988875
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=324.63 Aligned_cols=177 Identities=27% Similarity=0.345 Sum_probs=158.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..++||+|+||+||. +|+|+++++. ....+...+|..+|.+++||.||+++..|++.+..|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 357899999999999999996 8999998664 3345678899999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|+||+.||.|. ...+++..++.++.+|+.||.|||+. +|||||+||+|||+|.+|+++++|||+|+..-..
T Consensus 103 Vld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~- 178 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD- 178 (357)
T ss_pred EEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcccC-
Confidence 99999999996 56899999999999999999999999 9999999999999999999999999999864221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...+.++|||+.|||||++.+..|+.. +|+||+|+++|
T Consensus 179 -------~~~t~tfcGT~eYmAPEil~~~gy~~~---vDWWsLGillY 216 (357)
T KOG0598|consen 179 -------GDATRTFCGTPEYMAPEILLGKGYDKA---VDWWSLGILLY 216 (357)
T ss_pred -------CCccccccCCccccChHHHhcCCCCcc---cchHhHHHHHH
Confidence 223345899999999999999987655 99999999999
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=337.79 Aligned_cols=204 Identities=23% Similarity=0.256 Sum_probs=174.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHH-HHHHHHHhhcCC-CCceeeEEEEEecCC-cccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRS-FAAEFNALRNIR-HRNLIKIITICSSID-FEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~-~~~E~~~l~~l~-HpnIv~l~~~~~~~~-~~~l 545 (746)
.+++|...+.+|.|+||.||+ ||||.++.+.....+. -.||++.|++++ |||||++.+++.+.+ ..++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 457889999999999999997 9999997664333332 368999999999 999999999999988 9999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||||.....+ .+.+++..++.|+.||++||+|+|.+ |++|||+||+|||+.....+||+|||+||.+...
T Consensus 88 VfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk- 163 (538)
T KOG0661|consen 88 VFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRSK- 163 (538)
T ss_pred eHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccccC-
Confidence 99999755443 66799999999999999999999999 9999999999999998999999999999998543
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee-----------ccccccccchhhccccCCCcc
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA-----------LNEKKQNKSILKSAGIKGKKT 689 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~-----------~~~~~~~~~i~~~~~~~~~~~ 689 (746)
...+.++.|+||+|||++....+ |+.++||||+||||+ ..+.+|+.+|.+..|+|.+..
T Consensus 164 --------pPYTeYVSTRWYRAPEvLLrs~~--Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~ 233 (538)
T KOG0661|consen 164 --------PPYTEYVSTRWYRAPEVLLRSGY--YSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDS 233 (538)
T ss_pred --------CCcchhhhcccccchHHhhhccc--cCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCcccc
Confidence 33566999999999999997755 455799999999998 678888888888888888766
Q ss_pred HHHHHH
Q 041467 690 VSFFLS 695 (746)
Q Consensus 690 ~~~~~~ 695 (746)
+..-..
T Consensus 234 ~~eg~~ 239 (538)
T KOG0661|consen 234 WPEGYN 239 (538)
T ss_pred chhHHH
Confidence 655333
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=315.99 Aligned_cols=179 Identities=21% Similarity=0.323 Sum_probs=153.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEE-EEecCCc-cc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIIT-ICSSIDF-EG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~-~~~~~~~-~~ 544 (746)
...+|++.++||.|+||+||| ||.|.++... .+..+....|+.+|++++|||||++++ .+.+... .+
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 345688899999999999998 6777776442 445667899999999999999999998 4555554 89
Q ss_pred chhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 545 FDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS--IVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 545 lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
+|||+|..|+|. .+.+++..+.+++.|+++||..+|+. .+. |+||||||.||+++.+|.+|++|||++
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999995 56789999999999999999999993 224 999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.+... .+...+++|||.||+||.+.+.+|+.+ +||||+||++|
T Consensus 176 r~l~s~--------~tfA~S~VGTPyYMSPE~i~~~~Y~~k---SDiWslGClly 219 (375)
T KOG0591|consen 176 RFLSSK--------TTFAHSLVGTPYYMSPERIHESGYNFK---SDIWSLGCLLY 219 (375)
T ss_pred hHhcch--------hHHHHhhcCCCcccCHHHHhcCCCCcc---hhHHHHHHHHH
Confidence 987432 234456999999999999999998766 99999999998
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=317.89 Aligned_cols=221 Identities=22% Similarity=0.280 Sum_probs=186.6
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhh--hhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE--ASRSFAAEFNALRNIRHRNLIKIITICSSI--DFE 543 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~ 543 (746)
+..+.|+..+.|++|+||.||+ ||+|+++....+ ..-...|||.++.+++|||||.+..+.... +..
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 3456788999999999999997 999999865422 223468999999999999999999987764 479
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
|+|||||+.. ++ .+++...+++.++.|+++|++|||+. .|+||||||+|+|+...|.+||||||+||.+.
T Consensus 153 y~VMe~~EhD-Lksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 153 YIVMEYVEHD-LKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eeeHHHHHhh-HHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 9999999643 22 56899999999999999999999999 99999999999999999999999999999874
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee-----------ccccccccchhhccccCC
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA-----------LNEKKQNKSILKSAGIKG 686 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~-----------~~~~~~~~~i~~~~~~~~ 686 (746)
.. ....+..+-|.||+|||++.+.+. |+.++|+||+||||+ ..+.+|+..|+...++|+
T Consensus 229 sp--------~k~~T~lVVTLWYRaPELLLG~~t--yst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPt 298 (419)
T KOG0663|consen 229 SP--------LKPYTPLVVTLWYRAPELLLGAKT--YSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPS 298 (419)
T ss_pred CC--------cccCcceEEEeeecCHHHhcCCcc--cCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCc
Confidence 32 234556788999999999998754 455799999999998 678888999999999999
Q ss_pred CccHHHHHHhhCCCCCCCCCCCCcc
Q 041467 687 KKTVSFFLSLLSPSCSVFPLTPSSN 711 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~~p~~~ 711 (746)
+..|+.+..+.......+|+.|...
T Consensus 299 e~iwpg~~~lp~~k~~~f~~~pyn~ 323 (419)
T KOG0663|consen 299 EAIWPGYSELPAVKKMTFSEHPYNN 323 (419)
T ss_pred cccCCCccccchhhccccCCCCchh
Confidence 9999999888776656677655444
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-39 Score=336.76 Aligned_cols=224 Identities=25% Similarity=0.325 Sum_probs=180.2
Q ss_pred CCCCeEeecCCeeEEE--------EEeehhhhhhh--hhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-cccchhhhcc
Q 041467 483 SPANKIREGGFNIVYN--------VAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITICSSID-FEGFDFKAIS 551 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~--------vavK~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~-~~~lv~e~~~ 551 (746)
...+.+|+|+||+||+ ||||++..... ...+.|.+|+.+|++++|||||+++|+|.+.. ..++||||++
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 3455699999999997 89999875432 22568999999999999999999999999987 7899999999
Q ss_pred CCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEEcCCCCCCeeeCCCC-cEEEccccccccccCCCCC
Q 041467 552 NGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS-IVHGDLKPSNILLDQDV-VTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 552 ~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~-ivHrDlkp~NILl~~~~-~~ki~DfGla~~~~~~~~~ 622 (746)
+|+|+ ...+++..++.++.|||+|++|||++ + ||||||||+|||++.++ ++||||||+++......
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-- 198 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-- 198 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc--
Confidence 99996 35799999999999999999999999 6 99999999999999997 99999999998763321
Q ss_pred CCcccccccccccccccccccccccc--cccccCCCccceeeccceeecccc-----cc------ccchh--hccccCCC
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAA--RNLENREKRHTVMSFPQRFALNEK-----KQ------NKSIL--KSAGIKGK 687 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~~~~DiwSlG~i~~~~~~-----~~------~~~i~--~~~~~~~~ 687 (746)
...+...||+.|||||++.+ ..|+. |+||||||+++|.... .. ...+. ...+....
T Consensus 199 ------~~~~~~~GT~~wMAPEv~~~~~~~~~~---K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~ 269 (362)
T KOG0192|consen 199 ------TSMTSVAGTYRWMAPEVLRGEKSPYTE---KSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPK 269 (362)
T ss_pred ------ccccCCCCCccccChhhhcCCCCcCCc---cchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCc
Confidence 22334789999999999995 45544 5999999999991111 11 11111 12233234
Q ss_pred ccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 688 KTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
.+.+.+..++..||...|. ||++.++...++.+
T Consensus 270 ~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 270 ECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred cCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 5788899999999999999 99999887666643
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=325.80 Aligned_cols=187 Identities=25% Similarity=0.346 Sum_probs=162.7
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCc
Q 041467 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDF 542 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~ 542 (746)
.+...+|..++.||+|+|++||+ ||||++.++ .+...+.+.+|-.+|.+| .||.||+|+-.|.+...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 34567899999999999999996 999999765 244456678999999999 79999999999999999
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
+|+|+||+++|+|- ...+++..++.++.||+.|++|||++ |||||||||+|||+|++|++||+|||.|+.+.
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 99999999999984 57899999999999999999999999 99999999999999999999999999999987
Q ss_pred CCCCC-----CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPG-----TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~-----~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.... ..........+++||..|.+||++.....+.. +|||+||||+|
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~---sDiWAlGCily 278 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPS---SDLWALGCILY 278 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcc---cchHHHHHHHH
Confidence 54433 11111222367999999999999999887665 99999999999
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=316.68 Aligned_cols=187 Identities=23% Similarity=0.310 Sum_probs=154.0
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh---------hh-----hHHHHHHHHHhhcCCCCceee
Q 041467 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQK---------EA-----SRSFAAEFNALRNIRHRNLIK 532 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~---------~~-----~~~~~~E~~~l~~l~HpnIv~ 532 (746)
....+.|+....||+|.||.|-. ||||++.+... .. .+...+||.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 34567899999999999999975 99999875421 11 247899999999999999999
Q ss_pred EEEEEecC--CcccchhhhccCCccc----ccC-CCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcE
Q 041467 533 IITICSSI--DFEGFDFKAISNGQLR----LCN-LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605 (746)
Q Consensus 533 l~~~~~~~--~~~~lv~e~~~~g~l~----~~~-l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 605 (746)
|+++..+. +..|+|+|||..|.+. ... +++.++++|++++..||+|||.+ +||||||||+|+||+++|++
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~V 249 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGTV 249 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCcE
Confidence 99998774 4799999999999886 233 89999999999999999999999 99999999999999999999
Q ss_pred EEccccccccccCCCCCCCcccccccccccccccccccccccccc-cccCCCccceeeccceee
Q 041467 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN-LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 606 ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~~~~DiwSlG~i~~ 668 (746)
||+|||++......... .........+||+.|||||...+.. ....+.+.||||+||.+|
T Consensus 250 KIsDFGVs~~~~~~~~~---~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLY 310 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDE---GSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLY 310 (576)
T ss_pred EeeccceeeecccCCcc---ccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHH
Confidence 99999999865332111 1111222378999999999998743 333366899999999999
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-37 Score=316.95 Aligned_cols=185 Identities=19% Similarity=0.249 Sum_probs=158.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+.+.+||+|+||.||. +|+|++++.. ....+.++.|-.+|...++|+||+||..|.+.++.|+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 567899999999999999995 8999998764 3456678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||++||++. ...+++.+++.++.+++.|++.+|.. |+|||||||+|+|||..|++|++|||++..+....
T Consensus 219 iMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 99999999986 67899999999999999999999999 99999999999999999999999999985432200
Q ss_pred ---------------CC----C-C-------------------cccccccccccccccccccccccccccccCCCcccee
Q 041467 621 ---------------PG----T-T-------------------AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVM 661 (746)
Q Consensus 621 ---------------~~----~-~-------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~Diw 661 (746)
.. . . .+........+|||-|||||++.+..|+.. +|+|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~---cDwW 372 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKE---CDWW 372 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcc---ccHH
Confidence 00 0 0 001112334789999999999999988665 9999
Q ss_pred eccceee
Q 041467 662 SFPQRFA 668 (746)
Q Consensus 662 SlG~i~~ 668 (746)
|+|||||
T Consensus 373 SLG~Imy 379 (550)
T KOG0605|consen 373 SLGCIMY 379 (550)
T ss_pred HHHHHHH
Confidence 9999999
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=309.41 Aligned_cols=215 Identities=22% Similarity=0.298 Sum_probs=181.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--hhhHHHHHHHHHhhcCCCCc-eeeEEEEEecCC-----
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQK--EASRSFAAEFNALRNIRHRN-LIKIITICSSID----- 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--~~~~~~~~E~~~l~~l~Hpn-Iv~l~~~~~~~~----- 541 (746)
...|+..+.||+|+||+||+ ||+|+++.... .......||+.++++++|+| ||++++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 55677888999999999997 99999986644 34566899999999999999 999999999877
Q ss_pred -cccchhhhccCCccc------c---cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 542 -FEGFDFKAISNGQLR------L---CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 542 -~~~lv~e~~~~g~l~------~---~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
..++||||+... +. . ..++...++.+++|+++|++|||++ +|+||||||+||||+++|.+||+|||
T Consensus 90 ~~l~lvfe~~d~D-L~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDRD-LKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeeccc-HHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 788999998432 21 1 3467788999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee-----------ccccccccchhh
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA-----------LNEKKQNKSILK 680 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~-----------~~~~~~~~~i~~ 680 (746)
+|+...- .....+..++|.+|+|||++.+... |+..+||||+||||+ ..+.+|+..|++
T Consensus 166 lAra~~i--------p~~~yt~evvTlWYRaPEvLlGs~~--Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~ 235 (323)
T KOG0594|consen 166 LARAFSI--------PMRTYTPEVVTLWYRAPEVLLGSTS--YSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFR 235 (323)
T ss_pred hHHHhcC--------CcccccccEEEeeccCHHHhcCCCc--CCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 9996531 1222455789999999999998843 344699999999998 667888999999
Q ss_pred ccccCCCccHHHHHHhhCCCCCCCCCCC
Q 041467 681 SAGIKGKKTVSFFLSLLSPSCSVFPLTP 708 (746)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~p~~p 708 (746)
..++|+++.|+.+.++.+... .+|.++
T Consensus 236 ~lGtP~e~~Wp~v~~~~~~k~-~f~~~~ 262 (323)
T KOG0594|consen 236 LLGTPNEKDWPGVSSLPDYKA-PFPKWP 262 (323)
T ss_pred HcCCCCccCCCCccccccccc-cCcCCC
Confidence 999999999999999888765 455544
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=308.02 Aligned_cols=206 Identities=21% Similarity=0.313 Sum_probs=170.3
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhh--hhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec-----C
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVAN--LKQKEASRSFAAEFNALRNIRHRNLIKIITICSS-----I 540 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~--~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-----~ 540 (746)
.....|...+.||+|+||.|++ ||||++. .......++..||+++++.++|+|||.+++++.. .
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 3455677789999999999996 9999997 4556667889999999999999999999999876 2
Q ss_pred CcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 541 DFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
...|+|+|+|+ .+|. ...++..++..+++|+++|++|+|+. +|+|||+||+|++++.++.+||+|||+||.
T Consensus 99 ~DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~ 174 (359)
T KOG0660|consen 99 NDVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARY 174 (359)
T ss_pred ceeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceee
Confidence 36899999994 3332 34499999999999999999999999 999999999999999999999999999998
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee-----------ccccccccchhhcccc
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA-----------LNEKKQNKSILKSAGI 684 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~-----------~~~~~~~~~i~~~~~~ 684 (746)
.... ......+.++.|.||+|||++... ..|++++||||.||||+ .....|+..|.+..|+
T Consensus 175 ~~~~------~~~~~mTeYVaTRWYRAPElll~~--~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGt 246 (359)
T KOG0660|consen 175 LDKF------FEDGFMTEYVATRWYRAPELLLNS--SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGT 246 (359)
T ss_pred cccc------CcccchhcceeeeeecCHHHHhcc--ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCC
Confidence 7543 123456779999999999999754 23455699999999999 4566677778888888
Q ss_pred CCCccHHHHH
Q 041467 685 KGKKTVSFFL 694 (746)
Q Consensus 685 ~~~~~~~~~~ 694 (746)
|+++....+.
T Consensus 247 P~~e~l~~i~ 256 (359)
T KOG0660|consen 247 PSEEDLQKIR 256 (359)
T ss_pred CCHHHHHHhc
Confidence 8766655443
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=308.72 Aligned_cols=197 Identities=23% Similarity=0.311 Sum_probs=161.5
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----cccc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID-----FEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~-----~~~l 545 (746)
-.|+..+++|.|+||.||+ ||||++.... +.-.+|+++|++++|||||++.-+|.... +..+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 3567789999999999997 9999875332 22358999999999999999999887633 4568
Q ss_pred hhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-CCcEEEccccccccc
Q 041467 546 DFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-DVVTHVGDLGLAKFL 616 (746)
Q Consensus 546 v~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DfGla~~~ 616 (746)
|||||+....+ ...++...++-+..||.+|++|||+. +|+||||||+|+|+|. .|.+||||||.|+.+
T Consensus 100 VleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 100 VLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 99999865433 46788889999999999999999998 9999999999999995 499999999999988
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee-----------ccccccccchhhccccC
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA-----------LNEKKQNKSILKSAGIK 685 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~-----------~~~~~~~~~i~~~~~~~ 685 (746)
...+ ...++..|+.|+|||++.|... |+.++||||.|||++ ....+|..+|++..|+|
T Consensus 177 ~~~e---------pniSYicSRyYRaPELifga~~--Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~P 245 (364)
T KOG0658|consen 177 VKGE---------PNISYICSRYYRAPELIFGATE--YTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTP 245 (364)
T ss_pred ccCC---------CceeEEEeccccCHHHHcCccc--cCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCC
Confidence 4433 2345889999999999998743 455699999999998 55667788888888888
Q ss_pred CCccHHHHH
Q 041467 686 GKKTVSFFL 694 (746)
Q Consensus 686 ~~~~~~~~~ 694 (746)
+++.++.+.
T Consensus 246 t~e~I~~mn 254 (364)
T KOG0658|consen 246 TREDIKSMN 254 (364)
T ss_pred CHHHHhhcC
Confidence 866655443
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=292.38 Aligned_cols=174 Identities=24% Similarity=0.315 Sum_probs=157.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+....+|.|+||.|.. +|+|++.+.. .+..+....|.++|+.+.||.+|++++.|.+.+..|+
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lym 121 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYM 121 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEE
Confidence 456788999999999999985 8999997664 3445567889999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||+++|.+. .+++++..++.+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+|||+|+.+.
T Consensus 122 vmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--- 195 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVS--- 195 (355)
T ss_pred EEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEec---
Confidence 99999999985 56899999999999999999999999 99999999999999999999999999999863
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..+.+.|||+-|+|||++....|.. ++|+|||||+.|
T Consensus 196 --------~rT~TlCGTPeYLAPEii~sk~ynk---avDWWalGVLIY 232 (355)
T KOG0616|consen 196 --------GRTWTLCGTPEYLAPEIIQSKGYNK---AVDWWALGVLIY 232 (355)
T ss_pred --------CcEEEecCCccccChHHhhcCCCCc---chhHHHHHHHHH
Confidence 2345689999999999999998855 499999999888
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=321.16 Aligned_cols=219 Identities=25% Similarity=0.286 Sum_probs=180.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
+++|.+.+.||+|+||.||| ||+|.+.+.. .+..+.+.+|+++++.++|||||.+++.|+.....++|+
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 35788899999999999998 9999997654 445678999999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+.+ +|. ...+++++++.++.+++.||.|||+. +|+|||+||.|||++..|.+|+||||+||.+...
T Consensus 81 e~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~--- 153 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN--- 153 (808)
T ss_pred hhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccC---
Confidence 99976 665 67899999999999999999999999 9999999999999999999999999999987432
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhccccC----CC
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSAGIK----GK 687 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~~~~----~~ 687 (746)
....+...||+.|||||++.+.+|+.. +|.||+|||+|.....+ .+.|..+...+ +.
T Consensus 154 -----t~vltsikGtPlYmAPElv~e~pyd~~---sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~ 225 (808)
T KOG0597|consen 154 -----TSVLTSIKGTPLYMAPELVEEQPYDHT---SDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASS 225 (808)
T ss_pred -----ceeeeeccCcccccCHHHHcCCCccch---hhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccH
Confidence 123445789999999999999988766 99999999999444333 22333332222 24
Q ss_pred ccHHHHHHhhCCCCCCCCCCCCccc
Q 041467 688 KTVSFFLSLLSPSCSVFPLTPSSNS 712 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~~p~~~~ 712 (746)
.+...+..++.++|..|-+||....
T Consensus 226 ~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 226 SFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HHHHHHHHHhhcChhhcccHHHHhc
Confidence 5566777788888877777766553
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=317.92 Aligned_cols=223 Identities=21% Similarity=0.305 Sum_probs=177.3
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
+.+...+.||+|-||+||. ||||.++.. ....+.|.+|+++|++++|+|||+++|+|..++..|+|||||+
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 3345678999999999995 999998754 2334678999999999999999999999999889999999999
Q ss_pred CCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 552 NGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 552 ~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
.|+|. ...+...+.+.++.|||+|++||+++ ++|||||.++||||+++..+||+|||+||.+.++.....
T Consensus 285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~ 361 (468)
T KOG0197|consen 285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS 361 (468)
T ss_pred cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCceeec
Confidence 99985 45688999999999999999999999 999999999999999999999999999996543322111
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceeecc--cccc------ccchhh------ccccCCCccH
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALN--EKKQ------NKSILK------SAGIKGKKTV 690 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~--~~~~------~~~i~~------~~~~~~~~~~ 690 (746)
.+..-...|.|||++....++.+ +|||||||+++.. .... ..+.+. +.+ .++.+.
T Consensus 362 -------~~~kfPIkWtAPEa~~~~~FS~k---SDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp-~P~~CP 430 (468)
T KOG0197|consen 362 -------EGGKFPIKWTAPEALNYGKFSSK---SDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLP-RPEGCP 430 (468)
T ss_pred -------CCCCCCceecCHHHHhhCCcccc---cceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCC-CCCCCC
Confidence 11112457999999999998776 9999999999811 1111 111111 222 335688
Q ss_pred HHHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 691 SFFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 691 ~~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
+.+..+|..||...|+ ||+.......+
T Consensus 431 ~~vY~lM~~CW~~~P~~RPtF~~L~~~l 458 (468)
T KOG0197|consen 431 DEVYELMKSCWHEDPEDRPTFETLREVL 458 (468)
T ss_pred HHHHHHHHHHhhCCcccCCCHHHHHHHH
Confidence 8899999999999999 99998444333
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=333.14 Aligned_cols=234 Identities=23% Similarity=0.302 Sum_probs=191.2
Q ss_pred hcCCCCCCeEeecCCeeEEE--------------EEeehhhhhhhh-hhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKE-ASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
+.+.+..+.||+|+||+||+ ||||.++..... ..++|+||+++++.++|||||+++|+|..++..
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 34566789999999999996 999999876544 788999999999999999999999999999999
Q ss_pred cchhhhccCCccc---------------ccC----CCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 544 GFDFKAISNGQLR---------------LCN----LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 544 ~lv~e~~~~g~l~---------------~~~----l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
++|||||..|+|. ... ++..+.+.||.|||.|++||-++ .+|||||..+|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceE
Confidence 9999999999985 223 88899999999999999999999 8999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee--cccccc--------
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA--LNEKKQ-------- 674 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~--~~~~~~-------- 674 (746)
|||+|||++|.++..+-...... ..=..+|||||.+..++++.. +|||||||+++ .....|
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~------t~lPIRWMppEsIly~kFTte---SDVWs~GVvLWEIFsyG~QPy~glSn~ 712 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGN------TLLPIRWMPPESILYGKFTTE---SDVWSFGVVLWEIFSYGKQPYYGLSNQ 712 (774)
T ss_pred EEecccccchhhhhhhhhcccCC------ceeeeecCCHHHhhcCcccch---hhhhhhhhhhhhhhccccCcccccchH
Confidence 99999999998876543321111 111468999999999999776 99999999998 122221
Q ss_pred --ccchhh-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCCCC
Q 041467 675 --NKSILK-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPSRS 724 (746)
Q Consensus 675 --~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~~~ 724 (746)
+..|-. ..-..++.+...+.++|..||...|+ ||+.+++...++.....+
T Consensus 713 EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 713 EVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred HHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 111111 11233478889999999999999999 999999987777655443
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-36 Score=316.92 Aligned_cols=228 Identities=21% Similarity=0.250 Sum_probs=178.3
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhh----hh-hhhHHHHHHHHHhhcCC-CCceeeEEEEEecCC
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLK----QK-EASRSFAAEFNALRNIR-HRNLIKIITICSSID 541 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~ 541 (746)
...+.|...+.||+|+||+|+. ||||++..+ .. ...+.+.||+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 4567899999999999999996 999977654 12 23456779999999999 999999999999999
Q ss_pred cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC-CcEEEcccccccc
Q 041467 542 FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-VVTHVGDLGLAKF 615 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~-~~~ki~DfGla~~ 615 (746)
..++||||+.+|+|. ..++.+.+++++++|++.|++|+|++ +|+||||||+|||+|.+ +.+||+|||++..
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 999999999999986 57889999999999999999999999 99999999999999998 9999999999987
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccc-cccCCCccceeeccceee-----cccccc------ccchh----
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN-LENREKRHTVMSFPQRFA-----LNEKKQ------NKSIL---- 679 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~~~~DiwSlG~i~~-----~~~~~~------~~~i~---- 679 (746)
.. .......+.+||+.|+|||++.+.. |+.+ ++||||+||++| ...++. ...|.
T Consensus 171 ~~--------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~--~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~ 240 (370)
T KOG0583|consen 171 SP--------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGK--AADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF 240 (370)
T ss_pred cC--------CCCCcccCCCCCcccCCHHHhCCCCCcCCc--hhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc
Confidence 62 1123345689999999999999988 7644 899999999999 111111 00111
Q ss_pred hccccC-CCccHHHHHHhhCCCCCCCCCCCCccchhhhc
Q 041467 680 KSAGIK-GKKTVSFFLSLLSPSCSVFPLTPSSNSFTLLG 717 (746)
Q Consensus 680 ~~~~~~-~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~ 717 (746)
.....- +.++...+.+|+..++..|+.-+.+....++.
T Consensus 241 ~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~ 279 (370)
T KOG0583|consen 241 KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQ 279 (370)
T ss_pred cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhc
Confidence 111122 45556777777777776555433333344443
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-37 Score=286.58 Aligned_cols=244 Identities=18% Similarity=0.259 Sum_probs=191.5
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.+.|+..++||+|.|+.||+ +|+|++..+. ....+++.+|+++.+.++|||||++.+...+.++.|+||
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 46788889999999999996 7888886543 345678999999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC---CCCcEEEccccccccccCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~---~~~~~ki~DfGla~~~~~~ 619 (746)
|+|.+|++. ....++..+-.+++||+.|++|+|.+ +|||||+||+|+++. ...-+|++|||+|..+.
T Consensus 90 e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-- 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-- 164 (355)
T ss_pred ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeC--
Confidence 999999985 34568899999999999999999999 999999999999995 33469999999999874
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccccccchhhccccCCCccHHHHHHhhCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQNKSILKSAGIKGKKTVSFFLSLLSP 699 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 699 (746)
......+++|||+|||||++...+|+.. +||||.|||+|.. .....|+.++.....+..+++.
T Consensus 165 -------~g~~~~G~~GtP~fmaPEvvrkdpy~kp---vDiW~cGViLfiL-------L~G~~PF~~~~~~rlye~I~~g 227 (355)
T KOG0033|consen 165 -------DGEAWHGFAGTPGYLSPEVLKKDPYSKP---VDIWACGVILYIL-------LVGYPPFWDEDQHRLYEQIKAG 227 (355)
T ss_pred -------CccccccccCCCcccCHHHhhcCCCCCc---chhhhhhHHHHHH-------HhCCCCCCCccHHHHHHHHhcc
Confidence 2345677999999999999998887554 9999999999821 2233445555555666666666
Q ss_pred CCCCCC-CCCCccc-hhhhcccCCCCCCCCccccccccCcccccccC
Q 041467 700 SCSVFP-LTPSSNS-FTLLGLRLPSRSSSSFVSVSLATTPDLVDDRC 744 (746)
Q Consensus 700 ~~~~~p-~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 744 (746)
.....| ++|.+.+ ...+..||....+....+...+..++++.+|.
T Consensus 228 ~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 228 AYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRE 274 (355)
T ss_pred ccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchH
Confidence 554333 4666653 34555565554444455666677777777663
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=314.44 Aligned_cols=236 Identities=22% Similarity=0.316 Sum_probs=186.9
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSID 541 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~ 541 (746)
.+.+++....+.+...+.||+|+||+||+ ||||+++... .+..+.|+.|+.++++-+|.||+=+.|||..+.
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeecccccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 34455666666777899999999999998 9999997653 446788999999999999999999999999987
Q ss_pred cccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 542 FEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
. .+|+.+|++.+|+ ...++..+.+.||+|||+|+.|||.+ +|||||||..||++.++++|||+|||++..
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred e-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceee
Confidence 7 8999999999997 45688899999999999999999999 999999999999999999999999999865
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee------cccccc-ccchhhccc-----
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA------LNEKKQ-NKSILKSAG----- 683 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~------~~~~~~-~~~i~~~~~----- 683 (746)
-...... .......|...|||||++...+.-++++.+||||||||+| +.+..+ ...|+...+
T Consensus 538 k~~w~g~------~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~ 611 (678)
T KOG0193|consen 538 KTRWSGE------QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLM 611 (678)
T ss_pred eeeeccc------cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccC
Confidence 4322111 1122345788999999999777666777899999999999 111111 112222211
Q ss_pred ----cCCCccHHHHHHhhCCCCCCCCC-CCCccchhh
Q 041467 684 ----IKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTL 715 (746)
Q Consensus 684 ----~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~ 715 (746)
.....+.+.+..+++.||...|+ ||....+..
T Consensus 612 pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 612 PDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 22246677888888888877777 888886665
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=296.47 Aligned_cols=183 Identities=21% Similarity=0.297 Sum_probs=157.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhh-hhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE-ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
..++|+..++||.|..+.||+ ||||++...+.. ....+++|+..|+.++|||||+++..|..+...|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 457899999999999999996 999999876533 4688999999999999999999999999999999999
Q ss_pred hhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 548 KAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 548 e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
+||.+|++. ...+++..+..|.+++++||.|||++ |.||||||+.||||+.+|.+||+|||++..+....
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 999999975 45689999999999999999999999 99999999999999999999999999987776543
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ....+..+++||++|||||+++.. ...|+.|+||||||+...
T Consensus 181 ~----R~~~rf~tfvgtp~wmAPEvl~q~-~~GYdfKaDIwSfGITA~ 223 (516)
T KOG0582|consen 181 D----RQVTRFNTFVGTPCWMAPEVLMQQ-LHGYDFKADIWSFGITAC 223 (516)
T ss_pred c----eeeEeeccccCcccccChHHhhhc-ccCccchhhhhhhhHHHH
Confidence 2 112222668999999999996533 233566799999998654
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=298.17 Aligned_cols=180 Identities=26% Similarity=0.388 Sum_probs=149.6
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC--cccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~--~~~lv~ 547 (746)
..+|...+.||+|+||.||. .|||.+........+.+.+|+++|++++|||||+++|...... ..++.|
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 34577889999999999996 7999887654333667899999999999999999999755544 588999
Q ss_pred hhccCCccc-----cc-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-CCcEEEccccccccccCCC
Q 041467 548 KAISNGQLR-----LC-NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-DVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 548 e~~~~g~l~-----~~-~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DfGla~~~~~~~ 620 (746)
||+++|++. .. .+++..++++.+||++||+|||++ +||||||||+|||++. ++.+||+|||+|+......
T Consensus 96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 999999996 22 699999999999999999999999 9999999999999999 7999999999998765311
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
........+.||+.|||||++...... ++++||||+||++.
T Consensus 173 -----~~~~~~~~~~Gtp~~maPEvi~~g~~~--~~~sDiWSlGCtVv 213 (313)
T KOG0198|consen 173 -----TKSDSELSVQGTPNYMAPEVIRNGEVA--RRESDIWSLGCTVV 213 (313)
T ss_pred -----ccccccccccCCccccCchhhcCCCcC--CccchhhhcCCEEE
Confidence 111223357899999999999963222 23699999999988
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=295.41 Aligned_cols=177 Identities=20% Similarity=0.276 Sum_probs=159.9
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
...+|++.+.+|+|.||+|-+ ||||.+++.. .++....+|||++|+.++||||+.+|++|+..+...+
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 346788999999999999975 9999997653 4455678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||..+|.|+ .+.+++.+++++++||..|+.|+|.+ ++||||||.+|||+|.++.+||+|||++..+..
T Consensus 131 vMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~-- 205 (668)
T KOG0611|consen 131 VMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD-- 205 (668)
T ss_pred EEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc--
Confidence 99999999996 67899999999999999999999999 999999999999999999999999999987633
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....++||++-|.+||++.|.+|. ++.+|-||+||++|
T Consensus 206 -------~kfLqTFCGSPLYASPEIvNG~PY~--GPEVDsWsLGvLLY 244 (668)
T KOG0611|consen 206 -------KKFLQTFCGSPLYASPEIVNGTPYK--GPEVDSWSLGVLLY 244 (668)
T ss_pred -------ccHHHHhcCCcccCCccccCCCCCC--CCccchhhHHHHHH
Confidence 2344569999999999999999984 56899999999999
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=308.05 Aligned_cols=217 Identities=21% Similarity=0.264 Sum_probs=171.1
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhhhhh---hHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQKEA---SRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~---~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.|+..+.||.|+||.||- ||||+.....++. -+++.+|++.|++++|||+|.+.|+|......|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 467788999999999995 9999987655433 4568899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
||-|.--. ..++.+.++..|..+.+.||+|||+. +.||||||+.|||+++.|.||++|||.|..+.+
T Consensus 107 YClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----- 178 (948)
T KOG0577|consen 107 YCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----- 178 (948)
T ss_pred HHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCc-----
Confidence 99654322 66788999999999999999999999 999999999999999999999999999987633
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeecc-cc-------ccccchhh----ccccCC-CccH
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALN-EK-------KQNKSILK----SAGIKG-KKTV 690 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~-~~-------~~~~~i~~----~~~~~~-~~~~ 690 (746)
..+++|||+||||||+....-+.|+.++||||+|+.+... +. ......+- ..|+-. .+..
T Consensus 179 -------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS 251 (948)
T KOG0577|consen 179 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWS 251 (948)
T ss_pred -------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhH
Confidence 2348999999999999987777777789999999877611 11 11111111 222222 2333
Q ss_pred HHHHHhhCCCCCCCCC-CCCccc
Q 041467 691 SFFLSLLSPSCSVFPL-TPSSNS 712 (746)
Q Consensus 691 ~~~~~~~~~~~~~~p~-~p~~~~ 712 (746)
..+...++.|..+.|+ ||+...
T Consensus 252 ~~F~~Fvd~CLqKipqeRptse~ 274 (948)
T KOG0577|consen 252 DYFRNFVDSCLQKIPQERPTSEE 274 (948)
T ss_pred HHHHHHHHHHHhhCcccCCcHHH
Confidence 4566666666666666 777663
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=311.07 Aligned_cols=340 Identities=21% Similarity=0.205 Sum_probs=265.6
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
+.-+.||+|+|.++...+..|.++++|++++|.+|.++ .+|...+-..+|+.|+|.+|.+...-..++..++.|+.|||
T Consensus 78 ~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDL 156 (873)
T KOG4194|consen 78 SQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDL 156 (873)
T ss_pred cceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhh
Confidence 45678999999999888999999999999999999998 68877777777999999999998888888999999999999
Q ss_pred cCCCCc----CcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCC
Q 041467 98 DCGGRI----DSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSG 168 (746)
Q Consensus 98 ~~~~~~----~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 168 (746)
+.|... ..|..-.+++.|+|++|+|+ .|.++.+|..|.|++|+|+..++..|.+|++|+.|+|..|+|.-.
T Consensus 157 SrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~iriv 236 (873)
T KOG4194|consen 157 SRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIV 236 (873)
T ss_pred hhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeee
Confidence 876533 56777788999999999994 467888999999999999988888999999999999999998642
Q ss_pred CCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecC
Q 041467 169 TANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI 248 (746)
Q Consensus 169 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 248 (746)
. --.|.++++|+.|.|..|.+...-...|..+. .+++|+|..|+++..-.+|+.+|+.|+.|+||+|.|....
T Consensus 237 e------~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~-kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih 309 (873)
T KOG4194|consen 237 E------GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLE-KMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIH 309 (873)
T ss_pred h------hhhhcCchhhhhhhhhhcCcccccCcceeeec-ccceeecccchhhhhhcccccccchhhhhccchhhhheee
Confidence 1 23477888888888888888755555566665 6888888888888777778888888888888888888888
Q ss_pred CcCCCCCCCCceeecccccccccccccccccC---hHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccch---hhh
Q 041467 249 PPLIGETPNLQLLNIGGNHLQGSILSSLGNLT---LQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQ---QIL 322 (746)
Q Consensus 249 p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~---~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~ 322 (746)
++.+.-.++|++|+|++|+|+...+.++..|. .|.+.+|.+...-...|..+++|++|||++|.|++.+.+ .+.
T Consensus 310 ~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~ 389 (873)
T KOG4194|consen 310 IDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFN 389 (873)
T ss_pred cchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhc
Confidence 88888888888888888888876666655444 444557887766667788888888888888888876654 345
Q ss_pred hcccccceEEccCccccccCc-hhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCC
Q 041467 323 SVTTLSLYLELDNNLLNGSLP-PEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVP 382 (746)
Q Consensus 323 ~l~~l~~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p 382 (746)
.++.| +.|+|.+|++. .|| ..|..+. .|+.|||.+|.|...-|
T Consensus 390 gl~~L-rkL~l~gNqlk-~I~krAfsgl~---------------~LE~LdL~~NaiaSIq~ 433 (873)
T KOG4194|consen 390 GLPSL-RKLRLTGNQLK-SIPKRAFSGLE---------------ALEHLDLGDNAIASIQP 433 (873)
T ss_pred cchhh-hheeecCceee-ecchhhhccCc---------------ccceecCCCCcceeecc
Confidence 56677 46888888886 444 3444444 44555555555554444
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=306.46 Aligned_cols=212 Identities=24% Similarity=0.291 Sum_probs=176.5
Q ss_pred CCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCccc-
Q 041467 485 ANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR- 556 (746)
Q Consensus 485 ~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~- 556 (746)
++-+|.|+.|.||. ||||+++.- -+.+|+-|++|+|||||.+.|+|......++|||||+.|.|.
T Consensus 129 LeWlGSGaQGAVF~Grl~netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~ 201 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLHNETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYE 201 (904)
T ss_pred hhhhccCcccceeeeeccCceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHH
Confidence 56799999999996 999988532 245788899999999999999999999999999999999986
Q ss_pred ----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccc
Q 041467 557 ----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSI 632 (746)
Q Consensus 557 ----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~ 632 (746)
.+.+.......+..+||.|+.|||.+ +|||||||.-||||..+..+||+|||.++...+. ....
T Consensus 202 VLka~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---------STkM 269 (904)
T KOG4721|consen 202 VLKAGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK---------STKM 269 (904)
T ss_pred HHhccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh---------hhhh
Confidence 56788899999999999999999999 9999999999999999999999999999886432 3344
Q ss_pred cccccccccccccccccccccCCCccceeeccceee--------ccccccccchhhccc-----cCCCccHHHHHHhhCC
Q 041467 633 GINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA--------LNEKKQNKSILKSAG-----IKGKKTVSFFLSLLSP 699 (746)
Q Consensus 633 ~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~--------~~~~~~~~~i~~~~~-----~~~~~~~~~~~~~~~~ 699 (746)
.++||..|||||++...+...+ +||||||||+| ..+.++..-|+.... .....+.+.+.-++..
T Consensus 270 SFaGTVaWMAPEvIrnePcsEK---VDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kq 346 (904)
T KOG4721|consen 270 SFAGTVAWMAPEVIRNEPCSEK---VDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQ 346 (904)
T ss_pred hhhhhHhhhCHHHhhcCCcccc---cceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHH
Confidence 5899999999999999999777 99999999999 223333334443211 2225677888888899
Q ss_pred CCCCCCC-CCCccchhhhcc
Q 041467 700 SCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 700 ~~~~~p~-~p~~~~~~~~~~ 718 (746)
||...|. ||+...+...++
T Consensus 347 cw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 347 CWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred HHhcCCCCCccHHHHHHHHh
Confidence 9988888 999986655444
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=307.96 Aligned_cols=346 Identities=21% Similarity=0.210 Sum_probs=250.0
Q ss_pred CCCCcccccCcc-ccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCC
Q 041467 2 SSNNLLQYSKPL-CILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVR 80 (746)
Q Consensus 2 ~~n~~~~~~~~~-~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 80 (746)
.+||.++-..+. +..+++|+.++|..|.++ .+|...+...+|+.|+|.+|.|+.+-.+++..++.|+.||||.|.++.
T Consensus 85 lsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~ 163 (873)
T KOG4194|consen 85 LSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISE 163 (873)
T ss_pred ccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhc
Confidence 345544444443 455777888888888886 777766666778888888888876666777777888888888887766
Q ss_pred ccchhhcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCCccc-----ccCCCCCcEeeCccCcccccCCccccC
Q 041467 81 DILTEICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLS-----LSNASSLEMIEFSRNQFSGGVSVDFSR 151 (746)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 151 (746)
..-+.|..-.++++|+|+.|... ..|.++.+|..|.|+.|+++. |.+++.|+.|+|..|+|.-..-..|.+
T Consensus 164 i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqg 243 (873)
T KOG4194|consen 164 IPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQG 243 (873)
T ss_pred ccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcC
Confidence 65566766677888888776543 567777788888888888743 456778888888888877554567778
Q ss_pred CCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCC
Q 041467 152 LKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNL 231 (746)
Q Consensus 152 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l 231 (746)
|++|+.|.|..|.+.....+ .|..|.++++|+|+.|++...-..+++++. .|++|+|++|.|..+-++++...
T Consensus 244 L~Sl~nlklqrN~I~kL~DG------~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt-~L~~L~lS~NaI~rih~d~Wsft 316 (873)
T KOG4194|consen 244 LPSLQNLKLQRNDISKLDDG------AFYGLEKMEHLNLETNRLQAVNEGWLFGLT-SLEQLDLSYNAIQRIHIDSWSFT 316 (873)
T ss_pred chhhhhhhhhhcCcccccCc------ceeeecccceeecccchhhhhhcccccccc-hhhhhccchhhhheeecchhhhc
Confidence 88888888888877764443 366777888888888887766667777777 58888888888887777777777
Q ss_pred CCCCeeecccccceecCCcCCCCCCCCceeecccccccc---cccccccccChHHhhhccCCCCCCc---cccCCCCCCe
Q 041467 232 VNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG---SILSSLGNLTLQTYLFNNLQGNIPS---SLANCKSLLG 305 (746)
Q Consensus 232 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~~~~l~~l~~l~~l~n~l~~~~p~---~~~~l~~L~~ 305 (746)
++|++|+|++|+++...+..|..+..|+.|+|++|.++. ..+..+++|..|++.+|.+++.+.+ .|.++++|+.
T Consensus 317 qkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lrk 396 (873)
T KOG4194|consen 317 QKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRK 396 (873)
T ss_pred ccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhh
Confidence 888888888888877777777788888888888887763 2344556666677777777776654 4677788888
Q ss_pred eeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeec
Q 041467 306 LSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI 357 (746)
Q Consensus 306 L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 357 (746)
|+|.+|+|....-..|..+..| +.|||.+|.|...-|..|..+ .|+.|.+
T Consensus 397 L~l~gNqlk~I~krAfsgl~~L-E~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~ 446 (873)
T KOG4194|consen 397 LRLTGNQLKSIPKRAFSGLEAL-EHLDLGDNAIASIQPNAFEPM-ELKELVM 446 (873)
T ss_pred eeecCceeeecchhhhccCccc-ceecCCCCcceeecccccccc-hhhhhhh
Confidence 8888888873333456667777 578888888877777777766 6665544
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=315.85 Aligned_cols=248 Identities=21% Similarity=0.246 Sum_probs=194.9
Q ss_pred CCCCeEeecCCeeEEE------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 483 SPANKIREGGFNIVYN------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.+.++||.|.||+||+ ||||.++... .+..++|..|+.||.+++||||++|.|+.......++|+||
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEy 711 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEY 711 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhh
Confidence 4678999999999996 9999998654 45567899999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|++|+|+ ...+++.+...+.++||.|++||-++ ++|||||.++|||++.+...||+|||++|.+.++...
T Consensus 712 MENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~- 787 (996)
T KOG0196|consen 712 MENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA- 787 (996)
T ss_pred hhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccCCCc-
Confidence 9999996 45699999999999999999999999 9999999999999999999999999999987554321
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee------------ccccccccchhhccc-cCCCccH
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA------------LNEKKQNKSILKSAG-IKGKKTV 690 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~------------~~~~~~~~~i~~~~~-~~~~~~~ 690 (746)
.....+-.=..+|.|||++.-.+++.. +||||||+||+ +...+.+++|-+.+. .++..+.
T Consensus 788 ----~ytt~GGKIPiRWTAPEAIa~RKFTsA---SDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP 860 (996)
T KOG0196|consen 788 ----AYTTLGGKIPIRWTAPEAIAYRKFTSA---SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCP 860 (996)
T ss_pred ----cccccCCccceeecChhHhhhcccCch---hhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCc
Confidence 111111111368999999999999877 99999999998 333344566655433 3335667
Q ss_pred HHHHHhhCCCCCCCC-CCCCccchhhhcccCCCC--CCCCccccccccCccccc
Q 041467 691 SFFLSLLSPSCSVFP-LTPSSNSFTLLGLRLPSR--SSSSFVSVSLATTPDLVD 741 (746)
Q Consensus 691 ~~~~~~~~~~~~~~p-~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~ 741 (746)
..+..+|-.||.+.. .||....++-.+++|... +-+.........++.|++
T Consensus 861 ~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~~lld 914 (996)
T KOG0196|consen 861 AALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQPLLD 914 (996)
T ss_pred HHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCcccccC
Confidence 777788888886544 499999888888876532 223333333444455554
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=305.86 Aligned_cols=176 Identities=20% Similarity=0.306 Sum_probs=158.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
...|..-..||+|+.|.||- ||||++....+...+-...|+.+|+..+|||||.+++.|...+..|+||||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 34688889999999999995 999999888777777789999999999999999999999999999999999
Q ss_pred ccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 550 ISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 550 ~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
|++|+|- ...+++.++..|++++++||+|||.+ +|+|||||.+|||++.+|.+||+|||+|..+.....
T Consensus 352 m~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~---- 424 (550)
T KOG0578|consen 352 MEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS---- 424 (550)
T ss_pred cCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC----
Confidence 9999985 55689999999999999999999999 999999999999999999999999999988754332
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...+.+||++|||||++....|+.+ +||||||++..
T Consensus 425 ----KR~TmVGTPYWMAPEVvtrk~YG~K---VDIWSLGIMaI 460 (550)
T KOG0578|consen 425 ----KRSTMVGTPYWMAPEVVTRKPYGPK---VDIWSLGIMAI 460 (550)
T ss_pred ----ccccccCCCCccchhhhhhcccCcc---ccchhhhhHHH
Confidence 2345899999999999999988666 99999999776
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=275.63 Aligned_cols=227 Identities=19% Similarity=0.173 Sum_probs=177.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----ccc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID-----FEG 544 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~-----~~~ 544 (746)
..+|.+.+.+|+|||+.||. ||+|++.....+..+...+|++..++++||||++++++...+. ..|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 45788999999999999996 8999998888788889999999999999999999999876644 489
Q ss_pred chhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 545 FDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 545 lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
++++|+..|++. ...+++.+++.|+.+|++|+++||+. .|+++||||||.|||+.+.+.+++.|||.+..
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 999999999874 45789999999999999999999998 44699999999999999999999999999876
Q ss_pred ccCCCCC-CCcccccccccccccccccccccccccccccCCCccceeeccceeecccc---------cccc---------
Q 041467 616 LYGYEPG-TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK---------KQNK--------- 676 (746)
Q Consensus 616 ~~~~~~~-~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~---------~~~~--------- 676 (746)
..-...+ .....-+......+|..|+|||++.-+....-+.++|||||||++|...+ ++..
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~ 258 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNA 258 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeecc
Confidence 5422111 11122233445678999999999987766666778999999999991111 1111
Q ss_pred -chhhccccCCCccHHHHHHhhCCCCCCCCC
Q 041467 677 -SILKSAGIKGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 677 -~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
..+...+..++.....+.+|+..+|.+||.
T Consensus 259 q~s~P~~~~yse~l~~lik~mlqvdP~qRP~ 289 (302)
T KOG2345|consen 259 QISIPNSSRYSEALHQLIKSMLQVDPNQRPT 289 (302)
T ss_pred ccccCCCCCccHHHHHHHHHHhcCCcccCCC
Confidence 112222334455667777887777765554
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=304.93 Aligned_cols=214 Identities=17% Similarity=0.223 Sum_probs=173.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..+.|..++.+|.|+-|.|.. +|||++.++. .......++||-+|+-+.||||+++|++|+...+.|+
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 356788999999999999974 9999997663 2234568999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|.||+++|.|. ...+++.++.++++||+.|+.|+|+. +|+|||+||+|+|+|.++.+||+|||+|..-.+
T Consensus 90 vlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~-- 164 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVP-- 164 (786)
T ss_pred EEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccC--
Confidence 99999999986 67899999999999999999999999 999999999999999999999999999976422
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee-----cccccc--c--------cchhhccccC
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA-----LNEKKQ--N--------KSILKSAGIK 685 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~-----~~~~~~--~--------~~i~~~~~~~ 685 (746)
.....+.||++.|.|||++.|.+|+.. ++||||.|||+| ...++. + ...|+.....
T Consensus 165 -------gklLeTSCGSPHYA~PEIV~G~pYdG~--~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~I 235 (786)
T KOG0588|consen 165 -------GKLLETSCGSPHYAAPEIVSGRPYDGR--PSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNI 235 (786)
T ss_pred -------CccccccCCCcccCCchhhcCCCCCCC--ccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcC
Confidence 223345899999999999999999755 899999999998 111111 1 1222333333
Q ss_pred CCccHHHHHHhhCCCCCCCC
Q 041467 686 GKKTVSFFLSLLSPSCSVFP 705 (746)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~p 705 (746)
+.+..+++..|++.++..|-
T Consensus 236 s~eaQdLLr~ml~VDp~~Ri 255 (786)
T KOG0588|consen 236 SSEAQDLLRRMLDVDPSTRI 255 (786)
T ss_pred CHHHHHHHHHHhccCccccc
Confidence 34556666666666665444
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=303.79 Aligned_cols=178 Identities=20% Similarity=0.282 Sum_probs=159.0
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFE 543 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~ 543 (746)
...++|....++|+|+||+|+. +|||++++.. .+..+....|.+++.... ||.++.++..|...+..
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 3457899999999999999996 8999998653 455677888998888775 99999999999999999
Q ss_pred cchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 544 GFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 544 ~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
++||||+.+|++. ...+++..++.|+.+|+.||+|||++ +||+||||-+|||+|.+|++||+|||+++..-.
T Consensus 445 ~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~- 520 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG- 520 (694)
T ss_pred EEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccCC-
Confidence 9999999999975 46799999999999999999999999 999999999999999999999999999987421
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.+++||+-|||||++.+..|+.+ +|+|||||++|
T Consensus 521 -------~g~~TsTfCGTpey~aPEil~e~~Yt~a---VDWW~lGVLly 559 (694)
T KOG0694|consen 521 -------QGDRTSTFCGTPEFLAPEVLTEQSYTRA---VDWWGLGVLLY 559 (694)
T ss_pred -------CCCccccccCChhhcChhhhccCcccch---hhHHHHHHHHH
Confidence 2234557999999999999999999777 99999999999
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=300.36 Aligned_cols=176 Identities=22% Similarity=0.331 Sum_probs=157.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc-ccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDF-EGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~-~~lv 546 (746)
.++|+.++++|+|+||.++. |++|.+.... ....+....|+.++++++|||||.+++.|.+.+. .++|
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 56899999999999999984 8999987654 3344578899999999999999999999999887 9999
Q ss_pred hhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 547 FKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 547 ~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
|+||+||++. ...++++.+..++.|++.|+.|||+. .|+|||||+.||+++.++.||++|||+|+.+...
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999986 35689999999999999999999988 9999999999999999999999999999998543
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ....+++||+.||.||++.+.+|..+ +||||+||++|
T Consensus 160 ~--------~~a~tvvGTp~YmcPEil~d~pYn~K---SDiWsLGC~~y 197 (426)
T KOG0589|consen 160 D--------SLASTVVGTPYYMCPEILSDIPYNEK---SDIWSLGCCLY 197 (426)
T ss_pred h--------hhhheecCCCcccCHHHhCCCCCCcc---CcchhhcchHH
Confidence 2 23345899999999999999998766 99999999999
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=280.82 Aligned_cols=213 Identities=23% Similarity=0.241 Sum_probs=175.2
Q ss_pred hhhcCCCCCCeEeecCCeeEEE-------------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEec-C
Q 041467 477 KATNNFSPANKIREGGFNIVYN-------------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSS-I 540 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~ 540 (746)
+....|+....||+|.||.||+ +|||.++..+ ........||+.+++.++|||||.+..+|.. +
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 4556799999999999999997 6888876442 2345678899999999999999999999988 6
Q ss_pred CcccchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC----CcEEE
Q 041467 541 DFEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD----VVTHV 607 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~----~~~ki 607 (746)
...++++||.+...+. .+.++...+..|+.||+.|+.|||++ -|+||||||.|||+..+ |++||
T Consensus 101 ~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 101 KKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred ceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 6899999998765443 34688899999999999999999999 89999999999999766 99999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee-------------------
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA------------------- 668 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~------------------- 668 (746)
+|||+||.+...-. +..+...++-|.||+|||++.|... |++++||||.||||+
T Consensus 178 aDlGlaR~~~~plk-----pl~s~d~VVVTiWYRAPELLLGa~h--YT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~ 250 (438)
T KOG0666|consen 178 ADLGLARLFNNPLK-----PLASLDPVVVTIWYRAPELLLGARH--YTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTK 250 (438)
T ss_pred ecccHHHHhhcccc-----ccccCCceEEEEEecChHHhccccc--ccchhhhHHHHHHHHHHHccCccccchhhhcccC
Confidence 99999998754321 1223345788999999999998865 455799999999998
Q ss_pred -ccccccccchhhccccCCCccHHHHHHhhCC
Q 041467 669 -LNEKKQNKSILKSAGIKGKKTVSFFLSLLSP 699 (746)
Q Consensus 669 -~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 699 (746)
.-..+|...|+...++|++..|+.+..+.+.
T Consensus 251 ~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~ 282 (438)
T KOG0666|consen 251 NPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEY 282 (438)
T ss_pred CCchHHHHHHHHHHcCCCccccchhhhhCcch
Confidence 1123456688999999999999888877765
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=292.18 Aligned_cols=176 Identities=20% Similarity=0.242 Sum_probs=155.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
...|...+.||+|+||.||| ||+|++.... .....+.++|+.++..++||||.++|+.+..+...+++||
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 34677889999999999998 9999998764 4456789999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
||.+|++. ...+++.++.-+++++..|+.|+|++ +.+|||||+.||++..+|.+|++|||++..+...
T Consensus 92 y~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~---- 164 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNT---- 164 (467)
T ss_pred HhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeech----
Confidence 99999875 33448889999999999999999999 9999999999999999999999999999887432
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+++||+.|||||++.+..|+.+ +||||||+..+
T Consensus 165 ----~~rr~tfvGTPfwMAPEVI~~~~Y~~K---ADIWSLGITai 202 (467)
T KOG0201|consen 165 ----VKRRKTFVGTPFWMAPEVIKQSGYDTK---ADIWSLGITAI 202 (467)
T ss_pred ----hhccccccccccccchhhhccccccch---hhhhhhhHHHH
Confidence 223356999999999999997777665 99999999887
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=257.20 Aligned_cols=216 Identities=20% Similarity=0.283 Sum_probs=179.0
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..|...+.||+|.||+||+ ||+|+++... ........|||.+++.++|.|||+++++..++....+|+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 3567788999999999998 9999987654 3345678999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
||....-. ...++.+.++.++.|+++|+.|+|++ .+.|||+||.|.||+.+|+.|++|||+||...-..
T Consensus 82 ~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv--- 155 (292)
T KOG0662|consen 82 FCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV--- 155 (292)
T ss_pred HhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce---
Confidence 99532111 45678899999999999999999999 99999999999999999999999999999763211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee------------ccccccccchhhccccCCCccHH
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA------------LNEKKQNKSILKSAGIKGKKTVS 691 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~------------~~~~~~~~~i~~~~~~~~~~~~~ 691 (746)
.-....+-|.||++|.++.+.+. |+...|+||.||||+ ....+|.+.|+...+.+.++.|+
T Consensus 156 -----rcysaevvtlwyrppdvlfgakl--y~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wp 228 (292)
T KOG0662|consen 156 -----RCYSAEVVTLWYRPPDVLFGAKL--YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWP 228 (292)
T ss_pred -----EeeeceeeeeeccCcceeeeeeh--hccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCC
Confidence 11223567999999999998875 344699999999998 45567888999999999999999
Q ss_pred HHHHhhCCCCCCCCCCCCc
Q 041467 692 FFLSLLSPSCSVFPLTPSS 710 (746)
Q Consensus 692 ~~~~~~~~~~~~~p~~p~~ 710 (746)
.+..+.++.+ .|..|..
T Consensus 229 s~t~lpdyk~--yp~ypat 245 (292)
T KOG0662|consen 229 SMTKLPDYKP--YPIYPAT 245 (292)
T ss_pred ccccCCCCcc--cCCcccc
Confidence 9998887643 4544443
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=298.63 Aligned_cols=236 Identities=18% Similarity=0.223 Sum_probs=184.5
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE-------------EEeehhhh---hhhhhhHHHHHHHHHhhcCCCCceeeE
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN-------------VAMKVANL---KQKEASRSFAAEFNALRNIRHRNLIKI 533 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~l 533 (746)
+..+.+.-..++....+.||+|+||+||+ ||||..+. ......++|.+|+++|++++|||||++
T Consensus 147 I~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~ 226 (474)
T KOG0194|consen 147 IPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRF 226 (474)
T ss_pred ccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 44455566666777789999999999996 68888764 235667889999999999999999999
Q ss_pred EEEEecCCcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEE
Q 041467 534 ITICSSIDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV 607 (746)
Q Consensus 534 ~~~~~~~~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki 607 (746)
||++......++|||+|.+|+|. ...++..++..++.++|+||+|||+. +++||||-++|+|++.++.+||
T Consensus 227 yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKI 303 (474)
T KOG0194|consen 227 YGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKI 303 (474)
T ss_pred EEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEe
Confidence 99999999999999999999996 23589999999999999999999999 9999999999999999999999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccc------------cc
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKK------------QN 675 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~------------~~ 675 (746)
+|||+++.-...... .....-...|+|||.+....|+.+ +|||||||++|..... ..
T Consensus 304 SDFGLs~~~~~~~~~--------~~~~klPirWLAPEtl~~~~~s~k---TDV~sfGV~~~Eif~~g~~Py~g~~~~~v~ 372 (474)
T KOG0194|consen 304 SDFGLSRAGSQYVMK--------KFLKKLPIRWLAPETLNTGIFSFK---TDVWSFGVLLWEIFENGAEPYPGMKNYEVK 372 (474)
T ss_pred CccccccCCcceeec--------cccccCcceecChhhhccCccccc---cchhheeeeEEeeeccCCCCCCCCCHHHHH
Confidence 999998764211110 001123468999999998877655 9999999999821111 01
Q ss_pred cch-hhc-cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 676 KSI-LKS-AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 676 ~~i-~~~-~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
..| ... ....+....+.+..+++.||...|+ ||++..+...++.
T Consensus 373 ~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~ 419 (474)
T KOG0194|consen 373 AKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEA 419 (474)
T ss_pred HHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHH
Confidence 112 111 1122345667788888899999999 9999976655544
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=269.16 Aligned_cols=175 Identities=19% Similarity=0.306 Sum_probs=156.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
+.++|+..+.+|+|.||.||. ||+|++.+.+ .+..+.++||+++-+.++||||+++|++|.+....|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 467899999999999999995 9999987654 3345679999999999999999999999999999999
Q ss_pred hhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 546 DFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 546 v~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
++||.++|++. ...+++.....++.|+|.|+.|+|.. .|+||||||+|+|++.++..||+|||.+..-.
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 99999999985 45689999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+.|||.-|.+||...+..++.. +|+|++|+..|
T Consensus 176 ---------~~kR~tlcgt~dyl~pEmv~~~~hd~~---Vd~w~lgvl~y 213 (281)
T KOG0580|consen 176 ---------SNKRKTLCGTLDYLPPEMVEGRGHDKF---VDLWSLGVLCY 213 (281)
T ss_pred ---------CCCceeeecccccCCHhhcCCCCccch---hhHHHHHHHHH
Confidence 223345899999999999999988766 99999999888
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=298.11 Aligned_cols=212 Identities=20% Similarity=0.204 Sum_probs=168.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE----------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN----------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~----------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|+++++.++|||||++++++.+.+..+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 345788999999999999996 7899875432 234556889999999999999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+||||+++|++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 108 lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~- 183 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT- 183 (340)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCC-
Confidence 999999999886 45689999999999999999999999 999999999999999999999999999986521
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhc----ccc
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKS----AGI 684 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~----~~~ 684 (746)
.....+||+.|||||++.+..++. ++||||+||++|...... ...+... ...
T Consensus 184 ----------~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~ 250 (340)
T PTZ00426 184 ----------RTYTLCGTPEYIAPEILLNVGHGK---AADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKF 250 (340)
T ss_pred ----------CcceecCChhhcCHHHHhCCCCCc---cccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCC
Confidence 112367999999999998876654 599999999998221110 0111111 112
Q ss_pred CCCccHHHHHHhhCCCCCCCCC
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+......+..|+..++.+|+.
T Consensus 251 ~~~~~~~li~~~l~~dp~~R~~ 272 (340)
T PTZ00426 251 LDNNCKHLMKKLLSHDLTKRYG 272 (340)
T ss_pred CCHHHHHHHHHHcccCHHHcCC
Confidence 2345567778888888777764
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=295.40 Aligned_cols=377 Identities=25% Similarity=0.340 Sum_probs=306.3
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 82 (746)
+|++.+. .+....+..|++|++++|++. .+|++++.+..++.|+.|+|+++ .+|+.++.+.+|+.|+.++|++ ..+
T Consensus 54 ~N~l~~l-~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~-~el 129 (565)
T KOG0472|consen 54 HNDLEVL-REDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNEL-KEL 129 (565)
T ss_pred cCchhhc-cHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccccce-eec
Confidence 3444433 344455677999999999997 89999999999999999999998 7999999999999999999999 567
Q ss_pred chhhcCCCCCCEEEccCCC---CcCcccCCCCCCEEeccCCCccccc----CCCCCcEeeCccCcccccCCccccCCCCC
Q 041467 83 LTEICSLFKLERLRIDCGG---RIDSLGHLKSLLLLSLAFNQFLSLS----NASSLEMIEFSRNQFSGGVSVDFSRLKNL 155 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~---~~~~~~~l~~L~~L~Ls~N~l~~l~----~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 155 (746)
|+.++.+..|+.|+..+|. .+..++++.+|..|++.+|++..++ +++.|+.||+.+|-++ .+|..++++.+|
T Consensus 130 ~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L 208 (565)
T KOG0472|consen 130 PDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESL 208 (565)
T ss_pred CchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhh
Confidence 8889999999999887754 4477888999999999999996653 5889999999999997 678889999999
Q ss_pred CEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhh-hcccccceEEcccCcccccCCccccCCCCC
Q 041467 156 SWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIA-NLSSTIKQIAMGSNRISSTIPHGIRNLVNL 234 (746)
Q Consensus 156 ~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L 234 (746)
..|+|.+|+|.. .| .|.+|+.|++|+++.|+|+ .+|.... ++. ++..|||.+|+++ ..|+.+.-+.+|
T Consensus 209 ~~LyL~~Nki~~-------lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~-~l~vLDLRdNklk-e~Pde~clLrsL 277 (565)
T KOG0472|consen 209 ELLYLRRNKIRF-------LP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLN-SLLVLDLRDNKLK-EVPDEICLLRSL 277 (565)
T ss_pred HHHHhhhccccc-------CC-CCCccHHHHHHHhcccHHH-hhHHHHhcccc-cceeeeccccccc-cCchHHHHhhhh
Confidence 999999999975 34 5889999999999999997 7887777 665 7999999999998 699999999999
Q ss_pred CeeecccccceecCCcCCCCCCCCceeeccccccccc--------------------------------------ccccc
Q 041467 235 NWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGS--------------------------------------ILSSL 276 (746)
Q Consensus 235 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--------------------------------------~~~~l 276 (746)
.+||+|+|.++ .+|.+++++ .|+.|.+.+|.+... .+..+
T Consensus 278 ~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~ 355 (565)
T KOG0472|consen 278 ERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESF 355 (565)
T ss_pred hhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcc
Confidence 99999999997 678889999 999999999987410 00000
Q ss_pred ------cccC-------------------------------------------------hHHhhhccCCCCCCccccCCC
Q 041467 277 ------GNLT-------------------------------------------------LQTYLFNNLQGNIPSSLANCK 301 (746)
Q Consensus 277 ------~~l~-------------------------------------------------~l~~l~n~l~~~~p~~~~~l~ 301 (746)
.+.+ ....+.|+..+-+|..++.++
T Consensus 356 ~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~ 435 (565)
T KOG0472|consen 356 PDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQ 435 (565)
T ss_pred cchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhh
Confidence 0000 011124555556777788888
Q ss_pred CCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceee--------cCCC-CCCCCCCCEEEc
Q 041467 302 SLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLH--------IPEY-PENLSFFELLNL 372 (746)
Q Consensus 302 ~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~--------lp~~-~~~l~~L~~L~l 372 (746)
+|..|+|++|-+- .+|.+++.+..+ +.||++.|+|. .+|..+..+..++.+- ++.. +.++..|..|||
T Consensus 436 kLt~L~L~NN~Ln-~LP~e~~~lv~L-q~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL 512 (565)
T KOG0472|consen 436 KLTFLDLSNNLLN-DLPEEMGSLVRL-QTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDL 512 (565)
T ss_pred cceeeecccchhh-hcchhhhhhhhh-heecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceecc
Confidence 8888888888887 788888888887 57888888886 7888777666655541 2333 678899999999
Q ss_pred cCCcCcccCCCCCccCCCCeeeEecCCC
Q 041467 373 SYNYFGSEVPTKGVFNNKTRFSIIGNGK 400 (746)
Q Consensus 373 s~N~l~~~~p~~~~~~~~~~~~~~~n~~ 400 (746)
.+|.+...+|..+.+.++..+.+.|||.
T Consensus 513 ~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 513 QNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred CCCchhhCChhhccccceeEEEecCCcc
Confidence 9999999888888899999999999973
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.8e-33 Score=293.65 Aligned_cols=169 Identities=22% Similarity=0.237 Sum_probs=145.8
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG 553 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g 553 (746)
+.||+|+||.||+ ||||++.... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999996 8999886542 233456789999999999999999999999999999999999999
Q ss_pred ccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccc
Q 041467 554 QLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628 (746)
Q Consensus 554 ~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~ 628 (746)
++. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|+......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-------- 149 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-------- 149 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--------
Confidence 885 45689999999999999999999999 99999999999999999999999999987532111
Q ss_pred cccccccccccccccccccccccccCCCccceeeccceee
Q 041467 629 SSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 629 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|||||++.+..++.+ +||||+||++|
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwSlG~il~ 186 (323)
T cd05571 150 ATMKTFCGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMY 186 (323)
T ss_pred CcccceecCccccChhhhcCCCCCcc---ccCcccchhhh
Confidence 11234679999999999988777554 99999999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5e-35 Score=304.98 Aligned_cols=352 Identities=24% Similarity=0.330 Sum_probs=188.8
Q ss_pred cccccEEecccCcCc-ccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEE
Q 041467 17 RTFLRYINLVNNGFN-GEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERL 95 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 95 (746)
++.++-.|+++|.++ +.+|.....+++++.|.|...++. .+|+.++.+.+|++|.+++|++. .+...+..|+.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 345556666666665 356666666666666666666665 46666666666666666666653 234445555555555
Q ss_pred EccC-----CCCcCcccCCCCCCEEeccCCCccc----ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCC
Q 041467 96 RIDC-----GGRIDSLGHLKSLLLLSLAFNQFLS----LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLG 166 (746)
Q Consensus 96 ~l~~-----~~~~~~~~~l~~L~~L~Ls~N~l~~----l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 166 (746)
.+.. .|.++.+..|..|+.||||+|++.. +....++-+|+||+|+|..++...|.+|+.|-+||||+|++.
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe 163 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE 163 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh
Confidence 5443 3444555566666666666666633 334455666666666666555555566666666666666665
Q ss_pred CCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCccc-ccCCccccCCCCCCeeecccccce
Q 041467 167 SGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRIS-STIPHGIRNLVNLNWLTMESSQLI 245 (746)
Q Consensus 167 ~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~-~~~p~~~~~l~~L~~L~L~~N~l~ 245 (746)
. +|..+..+..|++|+|++|.+...--..+-.+. +|+.|.+++.+-+ ..+|.++..|.+|..+|+|.|++.
T Consensus 164 ~-------LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmt-sL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp 235 (1255)
T KOG0444|consen 164 M-------LPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMT-SLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP 235 (1255)
T ss_pred h-------cCHHHHHHhhhhhhhcCCChhhHHHHhcCccch-hhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC
Confidence 4 333455555666666666644311111111233 3555555544322 235555555555555555555554
Q ss_pred ecCCcCCCCCCCCceeecccccccccc--cccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCc-cccchhhh
Q 041467 246 GTIPPLIGETPNLQLLNIGGNHLQGSI--LSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT-STLPQQIL 322 (746)
Q Consensus 246 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~--~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~ 322 (746)
.+|+.+.++++|+.|+||+|+|+..- -..+.++..|+++.|+++ .+|+.++.+++|+.|.+.+|+++ .-+|..++
T Consensus 236 -~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIG 313 (1255)
T KOG0444|consen 236 -IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIG 313 (1255)
T ss_pred -cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchh
Confidence 45555555555555555555555321 223444555555555555 45555555555555555555543 12555555
Q ss_pred hcccccceEEccCccccccCchhhhcccCCcee--------ecCCCCCCCCCCCEEEccCCcCcccCC
Q 041467 323 SVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRL--------HIPEYPENLSFFELLNLSYNYFGSEVP 382 (746)
Q Consensus 323 ~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L--------~lp~~~~~l~~L~~L~ls~N~l~~~~p 382 (746)
.+..| ..+..++|.+. .+|+.++.|..|+.| .+|+.+.-++.|+.||+..|.=--.+|
T Consensus 314 KL~~L-evf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 314 KLIQL-EVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred hhhhh-HHHHhhccccc-cCchhhhhhHHHHHhcccccceeechhhhhhcCCcceeeccCCcCccCCC
Confidence 55555 34555555554 555555555555444 234444555566666666664333333
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-33 Score=299.35 Aligned_cols=230 Identities=18% Similarity=0.227 Sum_probs=169.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCC
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSSID 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~ 541 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +|||||+++++|...+
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 346789999999999999985 7888876432 23346789999999999 8999999999987654
Q ss_pred -cccchhhhccCCccc----------------------------------------------------------------
Q 041467 542 -FEGFDFKAISNGQLR---------------------------------------------------------------- 556 (746)
Q Consensus 542 -~~~lv~e~~~~g~l~---------------------------------------------------------------- 556 (746)
..+++|||+++|+|.
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 578999999999884
Q ss_pred ---ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccccccccc
Q 041467 557 ---LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIG 633 (746)
Q Consensus 557 ---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~ 633 (746)
...+++.++..++.||++|++|||+. +|+||||||+||++++++.+||+|||+++.+...... .....
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~------~~~~~ 235 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------VRKGS 235 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcch------hcccC
Confidence 02367888999999999999999999 9999999999999999999999999999875332211 11122
Q ss_pred ccccccccccccccccccccCCCccceeeccceeecccc-cc-c-------cch---hhc--cccCCCccHHHHHHhhCC
Q 041467 634 INGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N-------KSI---LKS--AGIKGKKTVSFFLSLLSP 699 (746)
Q Consensus 634 ~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~-------~~i---~~~--~~~~~~~~~~~~~~~~~~ 699 (746)
..++..|||||++.+..++.+ +|||||||++|.... .. . ..+ ... .........+.+..++..
T Consensus 236 ~~~~~~y~aPE~~~~~~~~~~---sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 312 (338)
T cd05102 236 ARLPLKWMAPESIFDKVYTTQ---SDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLA 312 (338)
T ss_pred CCCCccccCcHHhhcCCCCcc---cCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Confidence 446788999999988776554 999999999883211 10 0 000 000 111112334456666666
Q ss_pred CCCCCCC-CCCccchhhhccc
Q 041467 700 SCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 700 ~~~~~p~-~p~~~~~~~~~~~ 719 (746)
|+...|. ||++.++...++.
T Consensus 313 cl~~dp~~RPs~~el~~~l~~ 333 (338)
T cd05102 313 CWQGDPKERPTFSALVEILGD 333 (338)
T ss_pred HccCChhhCcCHHHHHHHHHH
Confidence 7766777 8888877655544
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.4e-33 Score=295.75 Aligned_cols=173 Identities=21% Similarity=0.296 Sum_probs=151.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 46788999999999999996 8999886542 23456788999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+++|++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-- 171 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR-- 171 (329)
T ss_pred EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCC--
Confidence 9999999885 45688999999999999999999999 9999999999999999999999999999865221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....||+.|+|||++.+..++. ++|||||||++|
T Consensus 172 ---------~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 206 (329)
T PTZ00263 172 ---------TFTLCGTPEYLAPEVIQSKGHGK---AVDWWTMGVLLY 206 (329)
T ss_pred ---------cceecCChhhcCHHHHcCCCCCC---cceeechHHHHH
Confidence 12357999999999998877654 599999999998
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-33 Score=309.01 Aligned_cols=225 Identities=20% Similarity=0.216 Sum_probs=164.3
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEec----C---Cc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSS----I---DF 542 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~----~---~~ 542 (746)
.++++.+.|.+|||+.||. ||+|++-..++...+...+||++|++|+ |||||.++|.... . -+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 3456788999999999995 8999987778888899999999999998 9999999994221 1 14
Q ss_pred ccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 543 EGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.++.||||++|.|- ...|++.++++|+.|+++|+++||.. .|+|||||||-|||||+.+|..||||||.|..
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 67899999987763 44599999999999999999999987 67899999999999999999999999999865
Q ss_pred ccCCC-CCCCcccccccccccccccccccccccccccccCCCccceeeccceee-----cccccc--ccchhh----ccc
Q 041467 616 LYGYE-PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA-----LNEKKQ--NKSILK----SAG 683 (746)
Q Consensus 616 ~~~~~-~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~-----~~~~~~--~~~i~~----~~~ 683 (746)
..... .......-.......-|+.|+|||.+.-..--+.+.|+|||||||++| ...++. ..+|.. ..+
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~~P~ 275 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYSFPP 275 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccccCCC
Confidence 32211 110000111112234689999999997443333355699999999999 222222 123322 211
Q ss_pred --cCCCccHHHHHHhhCCCCCCCC
Q 041467 684 --IKGKKTVSFFLSLLSPSCSVFP 705 (746)
Q Consensus 684 --~~~~~~~~~~~~~~~~~~~~~p 705 (746)
.....+..+|..|+..++..||
T Consensus 276 ~p~ys~~l~~LI~~mL~~nP~~RP 299 (738)
T KOG1989|consen 276 FPNYSDRLKDLIRTMLQPNPDERP 299 (738)
T ss_pred CccHHHHHHHHHHHHhccCcccCC
Confidence 2224455666777777666555
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-32 Score=290.91 Aligned_cols=167 Identities=21% Similarity=0.250 Sum_probs=144.2
Q ss_pred EeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCcc
Q 041467 488 IREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL 555 (746)
Q Consensus 488 ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l 555 (746)
||+|+||.||+ ||+|++.... ......+.+|++++++++|||||++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999996 8999886432 33456788999999999999999999999999999999999999998
Q ss_pred c-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccc
Q 041467 556 R-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630 (746)
Q Consensus 556 ~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~ 630 (746)
. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--------~~ 149 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--------DK 149 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--------Cc
Confidence 5 45689999999999999999999999 99999999999999999999999999997542211 11
Q ss_pred cccccccccccccccccccccccCCCccceeeccceee
Q 041467 631 SIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 631 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+||+.|+|||++.+..++. ++||||+||++|
T Consensus 150 ~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslGvil~ 184 (312)
T cd05585 150 TNTFCGTPEYLAPELLLGHGYTK---AVDWWTLGVLLY 184 (312)
T ss_pred cccccCCcccCCHHHHcCCCCCC---ccceechhHHHH
Confidence 23467999999999998877655 499999999998
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-32 Score=295.49 Aligned_cols=183 Identities=20% Similarity=0.219 Sum_probs=152.8
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4788999999999999996 8999986543 233456889999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~ 157 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT 157 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence 999999885 45789999999999999999999999 9999999999999999999999999999765321100
Q ss_pred CC---------------------------cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TT---------------------------AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~---------------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. ..........+||+.|+|||++.+..++. ++||||+||++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~---~~DvwSlGvil~ 227 (363)
T cd05628 158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNK---LCDWWSLGVIMY 227 (363)
T ss_pred cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCC---chhhhhhHHHHH
Confidence 00 00001123468999999999998877755 499999999998
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-33 Score=266.87 Aligned_cols=180 Identities=26% Similarity=0.339 Sum_probs=153.5
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--------hhhhHHHHHHHHHhhcCC-CCceeeEEEEEe
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--------KEASRSFAAEFNALRNIR-HRNLIKIITICS 538 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--------~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~ 538 (746)
.--..|+..+.+|.|..+.|.+ .|+|++.... .+..++-.+|+.+++++. ||+|+++.++++
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 3345688899999999998875 7888775331 123445678999999985 999999999999
Q ss_pred cCCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 539 SIDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 539 ~~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
.+...++|+|.|+.|.|. ...+++.+.++|++|+..|++|||.. .|||||+||+|||+|++..+||+|||+|
T Consensus 94 s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecccee
Confidence 999999999999999986 55789999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccc---cccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN---LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~~~~~DiwSlG~i~~ 668 (746)
..+.. .......|||++|.|||.+...- ...|++.+|+||+|||||
T Consensus 171 ~~l~~---------GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImy 219 (411)
T KOG0599|consen 171 CQLEP---------GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMY 219 (411)
T ss_pred eccCC---------chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHH
Confidence 98732 33445689999999999997543 334577899999999999
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.7e-34 Score=296.18 Aligned_cols=179 Identities=21% Similarity=0.272 Sum_probs=156.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.+.|+++..+|.|+||.||+ .|.|++..+..+..++|.-||++|+.++||+||++++.|+..+..|+..||
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 34456677899999999998 688888888888889999999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|.||... .+.+++.++..+++|++.||.|||++ .|||||||+.|||++-+|.++++|||++....
T Consensus 111 C~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~------ 181 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNK------ 181 (1187)
T ss_pred cCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccch------
Confidence 9999876 67899999999999999999999999 99999999999999999999999999986532
Q ss_pred Ccccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
.+.....+++||++|||||++.+.. -.+|+.++||||||+.+.
T Consensus 182 --~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLI 226 (1187)
T KOG0579|consen 182 --STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLI 226 (1187)
T ss_pred --hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHH
Confidence 1223345689999999999998542 344566799999999876
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-32 Score=294.31 Aligned_cols=183 Identities=19% Similarity=0.233 Sum_probs=152.2
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 3688999999999999996 8999986542 234456889999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+++|+|. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence 999999885 45689999999999999999999999 9999999999999999999999999999765322110
Q ss_pred CCc------------------------------ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTA------------------------------ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~------------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... .........+||+.|||||++....++. ++||||+||++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlG~il~ 230 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNK---ECDWWSLGVIMY 230 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCC---eeeeecchhHHH
Confidence 000 0000112357999999999998877655 499999999998
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-32 Score=295.17 Aligned_cols=183 Identities=20% Similarity=0.239 Sum_probs=150.6
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688899999999999996 8999876432 334567889999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+++|+|. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+........
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 999999985 45688999999999999999999999 9999999999999999999999999999643211100
Q ss_pred C--------Cccc-------------------------------ccccccccccccccccccccccccccCCCccceeec
Q 041467 623 T--------TAET-------------------------------ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSF 663 (746)
Q Consensus 623 ~--------~~~~-------------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSl 663 (746)
. .... .......+||+.|||||++.+..++. ++||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSl 234 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQ---ECDWWSL 234 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCC---ceeeEec
Confidence 0 0000 00011357999999999998877754 4999999
Q ss_pred cceee
Q 041467 664 PQRFA 668 (746)
Q Consensus 664 G~i~~ 668 (746)
||++|
T Consensus 235 Gvil~ 239 (377)
T cd05629 235 GAIMF 239 (377)
T ss_pred chhhh
Confidence 99998
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-32 Score=286.59 Aligned_cols=172 Identities=25% Similarity=0.309 Sum_probs=148.0
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67788999999999996 8999876432 22334678999999999999999999999999999999999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-- 156 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC--
Confidence 9999984 23588999999999999999999999 99999999999999999999999999998653211
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||..|||||++.+..++.+ +||||+||++|
T Consensus 157 -------~~~~~~g~~~y~aPE~~~~~~~~~~---~DvwslGvil~ 192 (285)
T cd05631 157 -------TVRGRVGTVGYMAPEVINNEKYTFS---PDWWGLGCLIY 192 (285)
T ss_pred -------eecCCCCCCCccCHhhhcCCCCCcc---cCchhHHHHHH
Confidence 1223578999999999998777554 99999999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-33 Score=290.72 Aligned_cols=172 Identities=24% Similarity=0.328 Sum_probs=150.2
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 3688899999999999997 8999986432 234456889999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+++|++. ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~--- 154 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR--- 154 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC---
Confidence 999999885 45689999999999999999999999 9999999999999999999999999999865321
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+||+.|+|||++.+..++. ++||||+||++|
T Consensus 155 --------~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlG~il~ 189 (291)
T cd05612 155 --------TWTLCGTPEYLAPEVIQSKGHNK---AVDWWALGILIY 189 (291)
T ss_pred --------cccccCChhhcCHHHHcCCCCCc---hhhHHHHHHHHH
Confidence 12357899999999998877654 599999999998
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-32 Score=293.44 Aligned_cols=182 Identities=20% Similarity=0.233 Sum_probs=150.6
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578899999999999996 8999986543 3345678999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+++|++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|||+++.........
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 99999885 45688999999999999999999999 99999999999999999999999999986432110000
Q ss_pred ---------------------------------------CcccccccccccccccccccccccccccccCCCccceeecc
Q 041467 624 ---------------------------------------TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFP 664 (746)
Q Consensus 624 ---------------------------------------~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG 664 (746)
...........+||+.|||||++.+..++. ++||||+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~---~~DiwSlG 235 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ---LCDWWSVG 235 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC---ccceeehh
Confidence 000000112467999999999998877655 49999999
Q ss_pred ceee
Q 041467 665 QRFA 668 (746)
Q Consensus 665 ~i~~ 668 (746)
|++|
T Consensus 236 ~il~ 239 (381)
T cd05626 236 VILF 239 (381)
T ss_pred hHHH
Confidence 9998
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-32 Score=291.84 Aligned_cols=183 Identities=16% Similarity=0.199 Sum_probs=153.9
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
....++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 34557899999999999999996 8999886432 22345688999999999999999999999999999
Q ss_pred cchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 544 GFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 544 ~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
++||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+...
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 9999999999986 44688999999999999999999999 9999999999999999999999999999875321
Q ss_pred CCCCCcccccccccccccccccccccccccccc-cCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLE-NREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~~~~~DiwSlG~i~~ 668 (746)
.. ......+||+.|||||++.+...+ .++.++||||+||++|
T Consensus 196 ~~-------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ily 238 (370)
T cd05621 196 GM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLF 238 (370)
T ss_pred Cc-------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHH
Confidence 11 112346799999999999865422 1345699999999998
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-32 Score=290.23 Aligned_cols=169 Identities=22% Similarity=0.249 Sum_probs=145.1
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG 553 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g 553 (746)
+.||+|+||.||+ ||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4689999999996 8999986542 234456788999999999999999999999999999999999999
Q ss_pred ccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccc
Q 041467 554 QLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628 (746)
Q Consensus 554 ~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~ 628 (746)
++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-------- 149 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-------- 149 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC--------
Confidence 985 45689999999999999999999999 99999999999999999999999999987532211
Q ss_pred cccccccccccccccccccccccccCCCccceeeccceee
Q 041467 629 SSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 629 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|||||++.+..++. ++||||+||++|
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlGvil~ 186 (323)
T cd05595 150 ATMKTFCGTPEYLAPEVLEDNDYGR---AVDWWGLGVVMY 186 (323)
T ss_pred CccccccCCcCcCCcccccCCCCCc---hhchhhhHHHHH
Confidence 1122367999999999998877655 499999999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-32 Score=288.30 Aligned_cols=226 Identities=19% Similarity=0.247 Sum_probs=169.3
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceee
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIK 532 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~ 532 (746)
.++|...+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++|||||+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 35788899999999999994 6888876432 334567999999999999999999
Q ss_pred EEEEEecCCcccchhhhccCCcccc------------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 041467 533 IITICSSIDFEGFDFKAISNGQLRL------------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIV 588 (746)
Q Consensus 533 l~~~~~~~~~~~lv~e~~~~g~l~~------------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~iv 588 (746)
+++++.+.+..+++|||+++|++.. ..+++.++..++.||+.|++|||+. +|+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence 9999999999999999999998751 2367788999999999999999999 999
Q ss_pred EcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 589 HGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 589 HrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
||||||+||++++++.+||+|||+++.+...... .......++..|||||++.+..++. ++|||||||++|
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slG~~l~ 231 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY------RIQGRAVLPIRWMAWECILMGKFTT---ASDVWAFGVTLW 231 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCcee------EecCcCCCCccccCHHHHhcCCCCc---hhhhHHHHHHHH
Confidence 9999999999999999999999999865322110 1112244578899999998777655 499999999988
Q ss_pred cccc---ccc------cchh-------h-----ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhh
Q 041467 669 LNEK---KQN------KSIL-------K-----SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLL 716 (746)
Q Consensus 669 ~~~~---~~~------~~i~-------~-----~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~ 716 (746)
.... ... ..+. . ........+.+.+..++..|+...|. ||++.++...
T Consensus 232 el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~ 301 (304)
T cd05096 232 EILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAF 301 (304)
T ss_pred HHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 3210 000 0000 0 00011123345566677777777777 8888776544
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-32 Score=289.22 Aligned_cols=169 Identities=23% Similarity=0.255 Sum_probs=145.6
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG 553 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g 553 (746)
+.||+|+||.||+ ||||++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4689999999996 8999986542 334567889999999999999999999999999999999999999
Q ss_pred ccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccc
Q 041467 554 QLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628 (746)
Q Consensus 554 ~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~ 628 (746)
++. ...+++.++..++.||+.|++|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-------- 149 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-------- 149 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--------
Confidence 885 45689999999999999999999999 99999999999999999999999999987532111
Q ss_pred cccccccccccccccccccccccccCCCccceeeccceee
Q 041467 629 SSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 629 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslGvil~ 186 (328)
T cd05593 150 ATMKTFCGTPEYLAPEVLEDNDYGR---AVDWWGLGVVMY 186 (328)
T ss_pred cccccccCCcCccChhhhcCCCCCc---cCCccccchHHH
Confidence 1123367999999999998877654 499999999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-32 Score=287.52 Aligned_cols=169 Identities=22% Similarity=0.242 Sum_probs=144.6
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG 553 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g 553 (746)
+.||+|+||.||+ ||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4689999999995 8999986542 233456788999999999999999999999999999999999999
Q ss_pred ccc-----ccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 554 QLR-----LCNLSLTQRVNIAIDVAFAIEYLRH-HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 554 ~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
++. ...+++.++..++.||+.|++|||+ . +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~------- 150 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG------- 150 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-------
Confidence 885 4568999999999999999999997 6 99999999999999999999999999987532211
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|||||++.+..++. ++||||+||++|
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 187 (325)
T cd05594 151 -ATMKTFCGTPEYLAPEVLEDNDYGR---AVDWWGLGVVMY 187 (325)
T ss_pred -cccccccCCcccCCHHHHccCCCCC---ccccccccceee
Confidence 1122367999999999998877655 499999999999
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-32 Score=311.37 Aligned_cols=225 Identities=22% Similarity=0.283 Sum_probs=177.9
Q ss_pred cCCCCCCeEeecCCeeEEE--------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 480 NNFSPANKIREGGFNIVYN--------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
...+..+.||+|+||.||+ ||||.+... +.+...+|.+|+.+|++++|||||+++|+|.+.+..+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 3456788999999999996 899988755 3455678999999999999999999999999999999
Q ss_pred chhhhccCCccc------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccc
Q 041467 545 FDFKAISNGQLR------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612 (746)
Q Consensus 545 lv~e~~~~g~l~------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGl 612 (746)
+++|||++|+|. ...++..+.+.++.|||+|+.||+++ ++|||||.++|+||+....+||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccch
Confidence 999999999995 34578999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee-------cccccc-ccchhh----
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA-------LNEKKQ-NKSILK---- 680 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~-------~~~~~~-~~~i~~---- 680 (746)
||.++..+....... ..=...|||||.+....++.+ +|||||||++| ..+... ..+++.
T Consensus 849 ArDiy~~~yyr~~~~------a~lPvkWm~PEsl~d~iFtsk---SDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ 919 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGE------AMLPVKWMPPESLKDGIFTSK---SDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLE 919 (1025)
T ss_pred hHhhhhchheeccCc------cccceecCCHHHHhhcccccc---cchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHh
Confidence 997654433221111 011358999999999888776 99999999998 111111 111111
Q ss_pred --ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 681 --SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 681 --~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
+.+ +...+...+.++|..||...|+ ||+.......+
T Consensus 920 ggRL~-~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~ 958 (1025)
T KOG1095|consen 920 GGRLD-PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQD 958 (1025)
T ss_pred CCccC-CCCCCChHHHHHHHHHccCChhhCccHHHHHhhh
Confidence 222 2345666666888889988888 99888655433
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-32 Score=292.41 Aligned_cols=192 Identities=24% Similarity=0.287 Sum_probs=164.0
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-C-----CceeeEEEEEecCCcccc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-H-----RNLIKIITICSSIDFEGF 545 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-----pnIv~l~~~~~~~~~~~l 545 (746)
+|++.+.||+|+||.|.| ||||+++.. +........|+++|..++ | -|+|+++++|...+..++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 899999999999999987 999999754 334455678999999997 4 389999999999999999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC--CCcEEEcccccccccc
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ--DVVTHVGDLGLAKFLY 617 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~--~~~~ki~DfGla~~~~ 617 (746)
|+|.+.....+ ...++...++.++.||+.||.+||.. +|||+||||+||||.+ ...+||+|||.|+...
T Consensus 266 VfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 266 VFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES 342 (586)
T ss_pred eehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccccC
Confidence 99998654332 45689999999999999999999999 9999999999999964 3579999999998742
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee-----------ccccccccchhhccccCC
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA-----------LNEKKQNKSILKSAGIKG 686 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~-----------~~~~~~~~~i~~~~~~~~ 686 (746)
....+++-++.|+|||++.|.+|+.+ .||||||||++ .++.+|...|.+..|.|+
T Consensus 343 -----------q~vytYiQSRfYRAPEVILGlpY~~~---IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp 408 (586)
T KOG0667|consen 343 -----------QRVYTYIQSRFYRAPEVILGLPYDTA---IDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPP 408 (586)
T ss_pred -----------CcceeeeeccccccchhhccCCCCCc---cceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCC
Confidence 22336889999999999999999776 99999999998 678888889998888777
Q ss_pred CccH
Q 041467 687 KKTV 690 (746)
Q Consensus 687 ~~~~ 690 (746)
....
T Consensus 409 ~~mL 412 (586)
T KOG0667|consen 409 PKML 412 (586)
T ss_pred HHHH
Confidence 5443
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-32 Score=286.02 Aligned_cols=169 Identities=24% Similarity=0.278 Sum_probs=145.0
Q ss_pred CeEeecCCeeEEE------------EEeehhhhhhh--hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 486 NKIREGGFNIVYN------------VAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 486 ~~ig~g~~g~v~~------------vavK~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
+.||+|+||.||+ ||+|++..... .....+.+|++++++++||||+++++++.+.+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999994 89998865432 234567889999999999999999999999999999999999
Q ss_pred CCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcc
Q 041467 552 NGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626 (746)
Q Consensus 552 ~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~ 626 (746)
+|++. ...+++.++..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~------ 152 (318)
T cd05582 82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE------ 152 (318)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC------
Confidence 99885 44689999999999999999999999 99999999999999999999999999987643211
Q ss_pred cccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 627 TASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 627 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+..++. ++|||||||++|
T Consensus 153 --~~~~~~~g~~~y~aPE~~~~~~~~~---~~DiwslG~il~ 189 (318)
T cd05582 153 --KKAYSFCGTVEYMAPEVVNRRGHTQ---SADWWSFGVLMF 189 (318)
T ss_pred --CceecccCChhhcCHHHHcCCCCCC---ccceeccceEee
Confidence 1123467999999999998776654 499999999999
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-32 Score=288.75 Aligned_cols=172 Identities=21% Similarity=0.316 Sum_probs=151.3
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 3688999999999999996 8999987543 234456889999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---- 153 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc----
Confidence 999999986 35689999999999999999999999 999999999999999999999999999976422
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 154 -------~~~~~~gt~~y~aPE~~~~~~~~~~---~DvwslG~il~ 189 (333)
T cd05600 154 -------YANSVVGSPDYMAPEVLRGKGYDFT---VDYWSLGCMLY 189 (333)
T ss_pred -------ccCCcccCccccChhHhcCCCCCCc---cceecchHHHh
Confidence 1234679999999999988876554 99999999998
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=291.99 Aligned_cols=182 Identities=19% Similarity=0.226 Sum_probs=150.4
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588899999999999997 8999986543 3345678899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+++|++. ...+++..+..++.||+.|++|||+. +|+||||||+|||++.++.+||+|||+|+.........
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 99999885 34688999999999999999999999 99999999999999999999999999986432100000
Q ss_pred ---------------------------------------CcccccccccccccccccccccccccccccCCCccceeecc
Q 041467 624 ---------------------------------------TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFP 664 (746)
Q Consensus 624 ---------------------------------------~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG 664 (746)
...........+||+.|||||++.+..++.+ +||||+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~---~DiwSlG 235 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQL---CDWWSVG 235 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCe---eeEEech
Confidence 0000001124579999999999988877654 9999999
Q ss_pred ceee
Q 041467 665 QRFA 668 (746)
Q Consensus 665 ~i~~ 668 (746)
|++|
T Consensus 236 vil~ 239 (382)
T cd05625 236 VILY 239 (382)
T ss_pred HHHH
Confidence 9998
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-32 Score=287.14 Aligned_cols=207 Identities=22% Similarity=0.226 Sum_probs=160.3
Q ss_pred CeEeecCCeeEEE------------EEeehhhhhh----hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 486 NKIREGGFNIVYN------------VAMKVANLKQ----KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 486 ~~ig~g~~g~v~~------------vavK~~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+.||+|+||.||+ ||||++.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999995 8999886432 22345678999999999999999999999999999999999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+++|++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 154 (323)
T cd05584 82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG---- 154 (323)
T ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC----
Confidence 9999885 44578899999999999999999999 99999999999999999999999999987532211
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhc----cccCCCcc
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKS----AGIKGKKT 689 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~----~~~~~~~~ 689 (746)
.......||+.|+|||++.+..++. ++||||+||++|...... ...+... .+..+...
T Consensus 155 ----~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (323)
T cd05584 155 ----TVTHTFCGTIEYMAPEILMRSGHGK---AVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEA 227 (323)
T ss_pred ----CcccccCCCccccChhhccCCCCCC---cceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHH
Confidence 1122367999999999998776654 599999999998221111 1111111 11122345
Q ss_pred HHHHHHhhCCCCCCCCC
Q 041467 690 VSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 690 ~~~~~~~~~~~~~~~p~ 706 (746)
.+.+..|+.+++.+||.
T Consensus 228 ~~li~~~l~~~p~~R~~ 244 (323)
T cd05584 228 RDLLKKLLKRNPSSRLG 244 (323)
T ss_pred HHHHHHHcccCHhHcCC
Confidence 56777777777776664
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-31 Score=290.67 Aligned_cols=186 Identities=16% Similarity=0.198 Sum_probs=155.4
Q ss_pred HHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC
Q 041467 473 AELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSI 540 (746)
Q Consensus 473 ~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~ 540 (746)
.+.....++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|+.+++.++||||+++++++.+.
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 34445568999999999999999996 8999886432 23345678999999999999999999999999
Q ss_pred CcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 541 DFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
+..++||||+++|+|. ...+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+|+.+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~ 192 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEc
Confidence 9999999999999986 45688999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccc-cCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLE-NREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~~~~~DiwSlG~i~~ 668 (746)
..... ......+||+.|||||++.+.... .++.++||||+||++|
T Consensus 193 ~~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvily 238 (371)
T cd05622 193 NKEGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 238 (371)
T ss_pred CcCCc-------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHH
Confidence 32211 112346799999999999765421 2355699999999998
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-32 Score=287.83 Aligned_cols=211 Identities=21% Similarity=0.241 Sum_probs=161.7
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHh---hcCCCCceeeEEEEEecCCcccch
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNAL---RNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l---~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 56788999999999996 8999986542 22345566676654 677899999999999999999999
Q ss_pred hhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 547 FKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 547 ~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-- 155 (324)
T cd05589 81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG-- 155 (324)
T ss_pred EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC--
Confidence 9999999885 45789999999999999999999999 99999999999999999999999999987532211
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhccc----cCCC
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSAG----IKGK 687 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~~----~~~~ 687 (746)
......+||+.|||||++.+..++. ++|||||||++|...... ...+..... ..+.
T Consensus 156 ------~~~~~~~g~~~y~aPE~~~~~~~~~---~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~ 226 (324)
T cd05589 156 ------DRTSTFCGTPEFLAPEVLTETSYTR---AVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSR 226 (324)
T ss_pred ------CcccccccCccccCHhHhcCCCCCc---ccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCH
Confidence 1123467999999999998877654 499999999998211110 111111111 1223
Q ss_pred ccHHHHHHhhCCCCCCCCC
Q 041467 688 KTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~ 706 (746)
...+.+..|+..++..||.
T Consensus 227 ~~~~li~~~L~~dP~~R~~ 245 (324)
T cd05589 227 EAISIMRRLLRRNPERRLG 245 (324)
T ss_pred HHHHHHHHHhhcCHhHcCC
Confidence 4556777777777776664
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=286.97 Aligned_cols=176 Identities=24% Similarity=0.267 Sum_probs=147.9
Q ss_pred CCCCCCeEeecCCeeEEE------------EEeehhhhhh----hhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcc
Q 041467 481 NFSPANKIREGGFNIVYN------------VAMKVANLKQ----KEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFE 543 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~------------vavK~~~~~~----~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~ 543 (746)
+|+..+.||+|+||.||+ ||+|++.... ....+.+.+|+++++.++ ||||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999994 7999886432 223456889999999995 99999999999999999
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
++||||+++|++. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence 9999999999885 45689999999999999999999999 999999999999999999999999999976532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ......+||+.|||||++.+... .+.++|||||||++|
T Consensus 158 ~~~-------~~~~~~~gt~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 198 (332)
T cd05614 158 EEK-------ERTYSFCGTIEYMAPEIIRGKGG--HGKAVDWWSLGILIF 198 (332)
T ss_pred cCC-------CccccccCCccccCHHHhcCCCC--CCCccccccchhhhh
Confidence 211 11234679999999999986542 233599999999998
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=286.99 Aligned_cols=183 Identities=20% Similarity=0.224 Sum_probs=152.3
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3688899999999999996 8999886432 334567889999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+++|+|. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.+......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence 999999885 45689999999999999999999999 9999999999999999999999999998765321110
Q ss_pred CC---------------------------cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TT---------------------------AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~---------------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. ..........+||+.|||||++.+..++.+ +||||+||++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~---~DiwSlGvily 227 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKL---CDWWSLGVIMY 227 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCc---ceeccccceee
Confidence 00 000011234689999999999988877654 99999999999
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=285.15 Aligned_cols=210 Identities=24% Similarity=0.228 Sum_probs=161.6
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHH-HhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFN-ALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~-~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||||++.... ....+.+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4689999999996 8999886542 223345556655 57789999999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|++. ...+++.++..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~------- 150 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS------- 150 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-------
Confidence 9885 45689999999999999999999999 99999999999999999999999999987532111
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceeeccccccc-----------cchhh----ccccCCCccHHH
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQN-----------KSILK----SAGIKGKKTVSF 692 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~~-----------~~i~~----~~~~~~~~~~~~ 692 (746)
......+||+.|||||++.+..++. ++||||+||++|....... ..+.. ..+..+......
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 226 (325)
T cd05604 151 -DTTTTFCGTPEYLAPEVIRKQPYDN---TVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSI 226 (325)
T ss_pred -CCcccccCChhhCCHHHHcCCCCCC---cCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHH
Confidence 1123467999999999998877755 4999999999992221110 11111 111223455677
Q ss_pred HHHhhCCCCCCCCC-CCC
Q 041467 693 FLSLLSPSCSVFPL-TPS 709 (746)
Q Consensus 693 ~~~~~~~~~~~~p~-~p~ 709 (746)
+..|+..++.+||. ++.
T Consensus 227 l~~ll~~~p~~R~~~~~~ 244 (325)
T cd05604 227 LEELLEKDRQRRLGAKED 244 (325)
T ss_pred HHHHhccCHHhcCCCCCC
Confidence 88888888887776 443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-33 Score=293.46 Aligned_cols=329 Identities=25% Similarity=0.358 Sum_probs=283.2
Q ss_pred cccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCC-CccchhhcCCCC
Q 041467 13 LCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV-RDILTEICSLFK 91 (746)
Q Consensus 13 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~ 91 (746)
...+++++++|.|...++. .+|++++.+.+|++|.+++|++. .+-+.+..|+.|+.+++.+|++. ..+|+.+..|..
T Consensus 27 ~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~d 104 (1255)
T KOG0444|consen 27 DVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKD 104 (1255)
T ss_pred hHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhccccc
Confidence 4467899999999999997 89999999999999999999998 57888999999999999999985 568999999999
Q ss_pred CCEEEccCCCCc---CcccCCCCCCEEeccCCCccccc-----CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCC
Q 041467 92 LERLRIDCGGRI---DSLGHLKSLLLLSLAFNQFLSLS-----NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVN 163 (746)
Q Consensus 92 L~~L~l~~~~~~---~~~~~l~~L~~L~Ls~N~l~~l~-----~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 163 (746)
|..|||+.|... ..+..-+++.+|+||+|+|.+++ +++.|-.||||+|++. .+|..+..|.+|+.|+|++|
T Consensus 105 Lt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~N 183 (1255)
T KOG0444|consen 105 LTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNN 183 (1255)
T ss_pred ceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCC
Confidence 999999997654 55666789999999999997654 6899999999999998 56677899999999999999
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEccccccc-ccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccc
Q 041467 164 NLGSGTANELDFINLLTNCSKLERLYFNRNGFE-GVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS 242 (746)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N 242 (746)
.+... -...+..+++|++|.+++.+=+ ..+|.++..+. +|..+|+|.|.+. .+|+.+-++.+|+.|+||+|
T Consensus 184 PL~hf------QLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~-NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N 255 (1255)
T KOG0444|consen 184 PLNHF------QLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLH-NLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGN 255 (1255)
T ss_pred hhhHH------HHhcCccchhhhhhhcccccchhhcCCCchhhhh-hhhhccccccCCC-cchHHHhhhhhhheeccCcC
Confidence 88641 2233556778889999887543 35788898887 7999999999998 79999999999999999999
Q ss_pred cceecCCcCCCCCCCCceeecccccccccccccccccChHHhh---hccCC-CCCCccccCCCCCCeeeecCCcCccccc
Q 041467 243 QLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL---FNNLQ-GNIPSSLANCKSLLGLSVSHNKLTSTLP 318 (746)
Q Consensus 243 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l---~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 318 (746)
+++ .+....+...+|+.|+||.|+++ .+|..+..|+.|.-+ +|++. .-+|+.++.+..|+.+..++|++. .+|
T Consensus 256 ~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVP 332 (1255)
T KOG0444|consen 256 KIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVP 332 (1255)
T ss_pred cee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCc
Confidence 997 55666778889999999999998 788888887776654 45543 248899999999999999999997 899
Q ss_pred hhhhhcccccceEEccCccccccCchhhhcccCCceeec
Q 041467 319 QQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI 357 (746)
Q Consensus 319 ~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 357 (746)
+.++.+..| +.|.|+.|.+. ++|+.+.-|+.|+.|++
T Consensus 333 EglcRC~kL-~kL~L~~NrLi-TLPeaIHlL~~l~vLDl 369 (1255)
T KOG0444|consen 333 EGLCRCVKL-QKLKLDHNRLI-TLPEAIHLLPDLKVLDL 369 (1255)
T ss_pred hhhhhhHHH-HHhccccccee-echhhhhhcCCcceeec
Confidence 999999999 57999999997 89999999999999876
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=284.66 Aligned_cols=169 Identities=21% Similarity=0.272 Sum_probs=141.9
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhc-CCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRN-IRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~-l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||||+++... ....+.+..|.+++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999996 8999886542 2234456677777765 4899999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+|+......
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~------- 150 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE------- 150 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-------
Confidence 9985 45689999999999999999999999 99999999999999999999999999997642211
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|||||++.+..++. ++||||+||++|
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslG~il~ 187 (316)
T cd05592 151 -GKASTFCGTPDYIAPEILKGQKYNE---SVDWWSFGVLLY 187 (316)
T ss_pred -CccccccCCccccCHHHHcCCCCCC---cccchhHHHHHH
Confidence 1122367999999999998877654 499999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-33 Score=268.32 Aligned_cols=171 Identities=19% Similarity=0.262 Sum_probs=151.4
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
|.+.+.+|+|+||.||| ||||.+... ...++..+|+.+|++++.|+||++||.+......|+|||||-.
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 45678999999999997 899998643 3567899999999999999999999999999999999999998
Q ss_pred Cccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcc
Q 041467 553 GQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626 (746)
Q Consensus 553 g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~ 626 (746)
|+.. ..++++.++..+++..++||+|||.. .-+|||||+.|||++.+|.+|++|||+|..+.+.
T Consensus 113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT------- 182 (502)
T KOG0574|consen 113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT------- 182 (502)
T ss_pred CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhh-------
Confidence 9874 67899999999999999999999999 8899999999999999999999999999877432
Q ss_pred cccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 627 TASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 627 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....++.||+.|||||++..-.|+.. +||||+|+...
T Consensus 183 -MAKRNTVIGTPFWMAPEVI~EIGY~~~---ADIWSLGITaI 220 (502)
T KOG0574|consen 183 -MAKRNTVIGTPFWMAPEVIEEIGYDTK---ADIWSLGITAI 220 (502)
T ss_pred -HHhhCccccCcccccHHHHHHhccchh---hhHhhhcchhh
Confidence 223345899999999999998888766 99999998654
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=279.82 Aligned_cols=219 Identities=16% Similarity=0.122 Sum_probs=167.0
Q ss_pred CCCeEeecCCeeEEE-------EEeehhhhhhhh---hhHHHHHHHHHhhcCCCCceeeEEEEEec----CCcccchhhh
Q 041467 484 PANKIREGGFNIVYN-------VAMKVANLKQKE---ASRSFAAEFNALRNIRHRNLIKIITICSS----IDFEGFDFKA 549 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~-------vavK~~~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----~~~~~lv~e~ 549 (746)
....||+|++|.||+ ||||++...... ..+.+.+|+++|++++|||||+++|++.+ ....++||||
T Consensus 24 ~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 24 TSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CCeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 346899999999997 999998754322 24678899999999999999999999877 3467899999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+++|+|. ...+++..+..++.|++.|++|||+.. +++||||||+||++++++.+||+|||+++.+...
T Consensus 104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----- 176 (283)
T PHA02988 104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----- 176 (283)
T ss_pred CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhccc-----
Confidence 9999986 456899999999999999999999742 7889999999999999999999999999865321
Q ss_pred cccccccccccccccccccccccc--cccccCCCccceeeccceeecccc-----cc--ccchhh----c--cccCCCcc
Q 041467 625 AETASSSIGINGTVGYVAPVIIAA--RNLENREKRHTVMSFPQRFALNEK-----KQ--NKSILK----S--AGIKGKKT 689 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~~~~DiwSlG~i~~~~~~-----~~--~~~i~~----~--~~~~~~~~ 689 (746)
.....||..|+|||++.+ ..+ +.++|||||||++|.... .. ...++. . ....+...
T Consensus 177 ------~~~~~~~~~y~aPE~~~~~~~~~---~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 247 (283)
T PHA02988 177 ------PFKNVNFMVYFSYKMLNDIFSEY---TIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDC 247 (283)
T ss_pred ------cccccCcccccCHHHhhhccccc---cchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcC
Confidence 112568899999999876 344 446999999999982111 10 011111 1 11111234
Q ss_pred HHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 690 VSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 690 ~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.+.+..++..|+...|+ ||++.++...+.
T Consensus 248 ~~~l~~li~~cl~~dp~~Rps~~ell~~l~ 277 (283)
T PHA02988 248 PLEIKCIVEACTSHDSIKRPNIKEILYNLS 277 (283)
T ss_pred cHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 56677788888888887 898887665443
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=288.24 Aligned_cols=183 Identities=21% Similarity=0.231 Sum_probs=150.4
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.+|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 3688999999999999996 8999886432 233456889999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+++|+|. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|..+......
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 999999986 34678999999999999999999999 9999999999999999999999999998543110000
Q ss_pred C-----------------------------------CcccccccccccccccccccccccccccccCCCccceeecccee
Q 041467 623 T-----------------------------------TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRF 667 (746)
Q Consensus 623 ~-----------------------------------~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~ 667 (746)
. ...........+||+.|||||++.+..++. ++||||+||++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlGvil 234 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ---LCDWWSVGVIL 234 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCc---ceeeeecccee
Confidence 0 000001122467999999999998877755 49999999999
Q ss_pred e
Q 041467 668 A 668 (746)
Q Consensus 668 ~ 668 (746)
|
T Consensus 235 y 235 (376)
T cd05598 235 Y 235 (376)
T ss_pred e
Confidence 9
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=283.28 Aligned_cols=207 Identities=23% Similarity=0.230 Sum_probs=159.4
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHH-HhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFN-ALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~-~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||+||+ ||||++.... ....+.+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4699999999996 8999986542 222344555554 56889999999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~------- 150 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS------- 150 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC-------
Confidence 9985 45689999999999999999999999 99999999999999999999999999987532111
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchh----hccccCCCccHHH
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSIL----KSAGIKGKKTVSF 692 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~----~~~~~~~~~~~~~ 692 (746)
......+||+.|||||++.+..++. ++|||||||++|...... ...+. ...+..+....+.
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l 226 (323)
T cd05575 151 -KTTSTFCGTPEYLAPEVLRKQPYDR---TVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHL 226 (323)
T ss_pred -CccccccCChhhcChhhhcCCCCCc---cccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 1123467999999999998877654 599999999998221111 01111 1112233456677
Q ss_pred HHHhhCCCCCCCCC
Q 041467 693 FLSLLSPSCSVFPL 706 (746)
Q Consensus 693 ~~~~~~~~~~~~p~ 706 (746)
+..|+..++.+||.
T Consensus 227 i~~~l~~~p~~R~~ 240 (323)
T cd05575 227 LEGLLQKDRTKRLG 240 (323)
T ss_pred HHHHhhcCHHhCCC
Confidence 88888888877776
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-32 Score=290.62 Aligned_cols=179 Identities=22% Similarity=0.302 Sum_probs=148.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence 34567788999999999996 8999885432 2345678999999999999999999999999999999999
Q ss_pred hccCCcccc-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 549 AISNGQLRL-CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 549 ~~~~g~l~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|+.+|++.. ...++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+....
T Consensus 153 ~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~------- 222 (353)
T PLN00034 153 FMDGGSLEGTHIADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM------- 222 (353)
T ss_pred cCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc-------
Confidence 999999873 3457788899999999999999999 99999999999999999999999999998753211
Q ss_pred ccccccccccccccccccccccccc--cCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLE--NREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~--~~~~~~DiwSlG~i~~ 668 (746)
.......||..|+|||++...... ..+.++|||||||++|
T Consensus 223 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~ 264 (353)
T PLN00034 223 -DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSIL 264 (353)
T ss_pred -ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHH
Confidence 112235799999999998543211 1134699999999998
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=287.50 Aligned_cols=182 Identities=16% Similarity=0.200 Sum_probs=152.6
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
...++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|+++++.++||||+++++++.+....+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 3456899999999999999995 8999986432 233455789999999999999999999999999999
Q ss_pred chhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 545 FDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 545 lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
+||||+++|+|. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 120 lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~ 196 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG 196 (370)
T ss_pred EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC
Confidence 999999999986 44688999999999999999999999 99999999999999999999999999998653221
Q ss_pred CCCCccccccccccccccccccccccccccc-ccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNL-ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~~~~~DiwSlG~i~~ 668 (746)
. ......+||+.|||||++.+... ..++.++||||+||++|
T Consensus 197 ~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvily 238 (370)
T cd05596 197 M-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 238 (370)
T ss_pred c-------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHH
Confidence 1 11224679999999999976532 22355799999999998
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=269.94 Aligned_cols=184 Identities=23% Similarity=0.253 Sum_probs=155.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.+|+|.-|+||. +|+|++.+.. .+...+++.|-+||+.++||.++.||+.|+.+.+.+++
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 34567788999999999996 7999997654 34456788899999999999999999999999999999
Q ss_pred hhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 547 FKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 547 ~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||++|+|. ...+++..++.++.+|+-||+|||-. |||.|||||+||||-++|++-++||-++......
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999985 45799999999999999999999999 9999999999999999999999999987543110
Q ss_pred CC------------------------------CCC------------------ccccccccccccccccccccccccccc
Q 041467 620 EP------------------------------GTT------------------AETASSSIGINGTVGYVAPVIIAARNL 651 (746)
Q Consensus 620 ~~------------------------------~~~------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 651 (746)
.+ ... ......+..++||-.|.|||++.|...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 00 000 011234556899999999999999988
Q ss_pred ccCCCccceeeccceee
Q 041467 652 ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 652 ~~~~~~~DiwSlG~i~~ 668 (746)
+.. +|+|+||+.+|
T Consensus 313 gsA---VDWWtfGIflY 326 (459)
T KOG0610|consen 313 GSA---VDWWTFGIFLY 326 (459)
T ss_pred Cch---hhHHHHHHHHH
Confidence 776 99999999999
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=284.07 Aligned_cols=174 Identities=21% Similarity=0.254 Sum_probs=147.5
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
+|+..+.||+|+||.||+ ||||++.... ....+.+..|.+++..+ +||+|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 478889999999999996 8999886542 22344577788888877 5899999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~-- 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG-- 155 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCCC--
Confidence 999999985 45689999999999999999999999 99999999999999999999999999997542111
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+..++. ++|||||||++|
T Consensus 156 ------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlGvil~ 192 (323)
T cd05616 156 ------VTTKTFCGTPDYIAPEIIAYQPYGK---SVDWWAFGVLLY 192 (323)
T ss_pred ------CccccCCCChhhcCHHHhcCCCCCC---ccchhchhHHHH
Confidence 1123467999999999999877755 499999999998
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=277.53 Aligned_cols=227 Identities=16% Similarity=0.157 Sum_probs=171.3
Q ss_pred cCCCCCCeEeecCCeeEEE------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 480 NNFSPANKIREGGFNIVYN------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.+|+..+.||+|+||.||+ ||+|+++... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 4688899999999999985 7888876542 23346789999999999999999999999999999999
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||+++|++. ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+.......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 9999999886 24689999999999999999999999 99999999999999999999999999876532111
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceeec-cc-cccc----------cchhhc-cccCCC
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFAL-NE-KKQN----------KSILKS-AGIKGK 687 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~-~~-~~~~----------~~i~~~-~~~~~~ 687 (746)
. .......++..|+|||++.+..++.+ +|||||||++|. .. .... ..+.+. ......
T Consensus 162 ~-------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 231 (266)
T cd05064 162 I-------YTTMSGKSPVLWAAPEAIQYHHFSSA---SDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPR 231 (266)
T ss_pred h-------hcccCCCCceeecCHHHHhhCCccch---hHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCC
Confidence 0 11112345678999999988776554 999999999883 11 1111 011111 111123
Q ss_pred ccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 688 KTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
.....+..++..|+...|. ||++.+....+.+
T Consensus 232 ~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 232 NCPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred CCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 3445666677777777777 8888766654433
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-32 Score=300.29 Aligned_cols=176 Identities=17% Similarity=0.196 Sum_probs=150.9
Q ss_pred CCCCCCeEeecCCeeEEE----------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 481 NFSPANKIREGGFNIVYN----------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~----------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.|...+.||+|++|.||+ ||+|.+..........+.+|+++++.++|||||+++++|...+..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 488899999999999995 7888765544445567889999999999999999999999999999999999
Q ss_pred cCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 551 SNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 551 ~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
++|+|. ...+++.++..++.||+.||+|+|+. +|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999985 23578999999999999999999999 999999999999999999999999999987633211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......+||+.|||||++.+..++. ++||||+||++|
T Consensus 225 ------~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~slG~~l~ 262 (478)
T PTZ00267 225 ------LDVASSFCGTPYYLAPELWERKRYSK---KADMWSLGVILY 262 (478)
T ss_pred ------cccccccCCCccccCHhHhCCCCCCc---HHhHHHHHHHHH
Confidence 11123467999999999998877655 499999999998
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-32 Score=283.74 Aligned_cols=177 Identities=19% Similarity=0.279 Sum_probs=146.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh-hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQK-EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||||++..... .....+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 46899999999999999996 89999864432 233467889999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+.++.+. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 157 (303)
T cd07869 84 YVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS--- 157 (303)
T ss_pred CCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC---
Confidence 99754432 34588999999999999999999999 99999999999999999999999999997542211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+... ++.++||||+||++|
T Consensus 158 -----~~~~~~~~~~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 195 (303)
T cd07869 158 -----HTYSNEVVTLWYRPPDVLLGSTE--YSTCLDMWGVGCIFV 195 (303)
T ss_pred -----ccCCCCcccCCCCChHHHcCCCC--CCcHHHHHHHHHHHH
Confidence 11223568999999999876432 234599999999998
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=283.98 Aligned_cols=174 Identities=21% Similarity=0.245 Sum_probs=147.7
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCC-ceeeEEEEEecCCcccchh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHR-NLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~Hp-nIv~l~~~~~~~~~~~lv~ 547 (746)
+|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++|+ +|+++++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 478889999999999996 8999986542 33456788999999999765 5888999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+++|++. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-- 155 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG-- 155 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC--
Confidence 999999985 45689999999999999999999999 99999999999999999999999999987532111
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 156 ------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslGvil~ 192 (324)
T cd05587 156 ------KTTRTFCGTPDYIAPEIIAYQPYGK---SVDWWAFGVLLY 192 (324)
T ss_pred ------CceeeecCCccccChhhhcCCCCCc---ccchhhhHHHHH
Confidence 1122467999999999998877655 499999999998
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=281.99 Aligned_cols=207 Identities=24% Similarity=0.226 Sum_probs=156.8
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHH-HhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFN-ALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~-~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||+|++.... ....+.+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4699999999996 8999986432 222334444544 57889999999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|++. ...+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~------- 150 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN------- 150 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-------
Confidence 9885 35678899999999999999999999 99999999999999999999999999997542211
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhc----cccCCCccHHH
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKS----AGIKGKKTVSF 692 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~----~~~~~~~~~~~ 692 (746)
......+||+.|||||++.+..++. ++||||+||++|...... ...+... .+..+....+.
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l 226 (325)
T cd05602 151 -GTTSTFCGTPEYLAPEVLHKQPYDR---TVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHL 226 (325)
T ss_pred -CCcccccCCccccCHHHHcCCCCCC---ccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHH
Confidence 1123467999999999998877655 499999999998221111 0111111 11222445567
Q ss_pred HHHhhCCCCCCCCC
Q 041467 693 FLSLLSPSCSVFPL 706 (746)
Q Consensus 693 ~~~~~~~~~~~~p~ 706 (746)
+..|+.+++..||.
T Consensus 227 i~~~l~~~p~~R~~ 240 (325)
T cd05602 227 LEGLLQKDRTKRLG 240 (325)
T ss_pred HHHHcccCHHHCCC
Confidence 77777777776665
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=289.90 Aligned_cols=229 Identities=19% Similarity=0.209 Sum_probs=170.5
Q ss_pred hcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDF 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~ 542 (746)
.++|+..+.||+|+||.||+ ||||+++... ....+.+.+|+++++.+ +|||||+++++|.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45788999999999999984 7999886432 23446788999999999 89999999999999999
Q ss_pred ccchhhhccCCccc----c-------------------------------------------------------------
Q 041467 543 EGFDFKAISNGQLR----L------------------------------------------------------------- 557 (746)
Q Consensus 543 ~~lv~e~~~~g~l~----~------------------------------------------------------------- 557 (746)
.++||||+++|+|. .
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 99999999998873 0
Q ss_pred ---------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 558 ---------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 558 ---------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
..+++..+..++.||+.|++|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 1367888999999999999999999 9999999999999999999999999999865332110
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c-------c---chhhcc--ccCCCc
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N-------K---SILKSA--GIKGKK 688 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~-------~---~i~~~~--~~~~~~ 688 (746)
.......++..|||||++.+..++. ++|||||||++|.... .. . . ...... ......
T Consensus 271 ------~~~~~~~~~~~y~aPE~~~~~~~~~---~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (375)
T cd05104 271 ------VVKGNARLPVKWMAPESIFNCVYTF---ESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPEC 341 (375)
T ss_pred ------cccCCCCCCcceeChhHhcCCCCCC---CCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCC
Confidence 1111233567899999998877655 4999999999883211 10 0 0 011100 011112
Q ss_pred cHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 689 TVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 689 ~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
....+.+++..|+...|+ ||++.++...+++
T Consensus 342 ~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 342 APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 234566666667777777 8888877655543
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=283.21 Aligned_cols=169 Identities=20% Similarity=0.208 Sum_probs=143.5
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||||++.... ....+.+.+|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999996 8999886542 23445677898888876 699999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|+|. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~------- 150 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG------- 150 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-------
Confidence 9985 45789999999999999999999999 99999999999999999999999999987532111
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|||||++.+..++. ++||||+||++|
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 187 (320)
T cd05590 151 -KTTSTFCGTPDYIAPEILQEMLYGP---SVDWWAMGVLLY 187 (320)
T ss_pred -CcccccccCccccCHHHHcCCCCCC---ccchhhhHHHHH
Confidence 1122367999999999998776655 499999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-31 Score=279.98 Aligned_cols=179 Identities=21% Similarity=0.176 Sum_probs=150.7
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3688899999999999996 8999987543 234567889999999999999999999999999999999
Q ss_pred hhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 548 KAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 548 e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||+++|+|. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+.+.....
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 999999886 25689999999999999999999999 999999999999999999999999999987633211
Q ss_pred CCCccccccccccccccccccccccccccc---ccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNL---ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~---~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++..... ..++.++||||+||++|
T Consensus 158 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~ 200 (330)
T cd05601 158 -------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAY 200 (330)
T ss_pred -------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceee
Confidence 11223578999999999874321 12345699999999999
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=290.07 Aligned_cols=230 Identities=18% Similarity=0.230 Sum_probs=170.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCC
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSSID 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~ 541 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|+++++.+ +|||||+++++|...+
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 345788999999999999994 8999886432 33355688999999999 8999999999999999
Q ss_pred cccchhhhccCCcccc----------------------------------------------------------------
Q 041467 542 FEGFDFKAISNGQLRL---------------------------------------------------------------- 557 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~~---------------------------------------------------------------- 557 (746)
..++||||+++|++..
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 9999999999888740
Q ss_pred -----------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcc
Q 041467 558 -----------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626 (746)
Q Consensus 558 -----------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~ 626 (746)
..+++.++.+++.||+.|++|||+. +|+||||||+||++++++.+||+|||+++.+......
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~---- 268 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY---- 268 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce----
Confidence 1367888999999999999999999 9999999999999999999999999999865322110
Q ss_pred cccccccccccccccccccccccccccCCCccceeeccceeeccc--cccc-------c---chhhc--cccCCCccHHH
Q 041467 627 TASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQN-------K---SILKS--AGIKGKKTVSF 692 (746)
Q Consensus 627 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~~-------~---~i~~~--~~~~~~~~~~~ 692 (746)
.......++..|||||++....++. ++|||||||++|... .... . .+... .+.......+.
T Consensus 269 --~~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (374)
T cd05106 269 --VVKGNARLPVKWMAPESIFDCVYTV---QSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPE 343 (374)
T ss_pred --eeccCCCCccceeCHHHhcCCCCCc---cccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHH
Confidence 1111233567899999998776654 599999999998321 1110 0 11110 01111122355
Q ss_pred HHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 693 FLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 693 ~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
+..++..|+...|. ||++.++...+++
T Consensus 344 l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 344 IYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 66666666666676 8888877665544
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=282.03 Aligned_cols=169 Identities=21% Similarity=0.244 Sum_probs=144.1
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||+|++.... ....+.+.+|+.++.++ +|||||++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999996 8999987542 23345678899988776 799999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~------- 150 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG------- 150 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-------
Confidence 9885 45789999999999999999999999 99999999999999999999999999987532111
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+..++. ++||||+||++|
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 187 (329)
T cd05618 151 -DTTSTFCGTPNYIAPEILRGEDYGF---SVDWWALGVLMF 187 (329)
T ss_pred -CccccccCCccccCHHHHcCCCCCC---ccceecccHHHH
Confidence 1122367999999999998877655 499999999998
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=271.14 Aligned_cols=175 Identities=24% Similarity=0.293 Sum_probs=153.4
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.+.|..-++||+||||+||- +|.|++.++. .+...-...|-.++++++.|.||.+--+|+..+..++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 45677889999999999995 6777776543 22334567899999999999999999999999999999
Q ss_pred hhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 547 FKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 547 ~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+..|.+|+|. ...+++.+++.++.+|+.||++||++ .||.||+||+|||+|++|+++|+|.|+|..+.+.
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 9999999997 34689999999999999999999999 9999999999999999999999999999987543
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ...+.+||.+|||||++....|+.. +|+||+||++|
T Consensus 341 ~---------~~~~rvGT~GYMAPEvl~ne~Y~~s---~Dwf~lGCllY 377 (591)
T KOG0986|consen 341 K---------PIRGRVGTVGYMAPEVLQNEVYDFS---PDWFSLGCLLY 377 (591)
T ss_pred C---------ccccccCcccccCHHHHcCCcccCC---ccHHHHHhHHH
Confidence 3 3345689999999999999987655 99999999999
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=283.85 Aligned_cols=175 Identities=19% Similarity=0.273 Sum_probs=151.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 46799999999999999997 7899886542 2345679999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+++|+|. ...+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 157 (331)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc----
Confidence 99999986 356889999999999999999999863 6999999999999999999999999999765321
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||..|+|||++.+..++. ++|||||||++|
T Consensus 158 ------~~~~~~g~~~y~aPE~~~~~~~~~---~~DiwslG~il~ 193 (331)
T cd06649 158 ------MANSFVGTRSYMSPERLQGTHYSV---QSDIWSMGLSLV 193 (331)
T ss_pred ------ccccCCCCcCcCCHhHhcCCCCCc---hHhHHHHHHHHH
Confidence 112357899999999998877655 499999999998
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-31 Score=280.75 Aligned_cols=207 Identities=25% Similarity=0.244 Sum_probs=157.1
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHH-HhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFN-ALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~-~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||+|++.... ....+.+.+|.. +++.++|||||++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999996 8999886432 223344555654 67889999999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|++. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~------- 150 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE------- 150 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-------
Confidence 9885 45688999999999999999999999 99999999999999999999999999987532111
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceeeccccccc-----------cchhhc----cccCCCccHHH
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQN-----------KSILKS----AGIKGKKTVSF 692 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~~-----------~~i~~~----~~~~~~~~~~~ 692 (746)
......+||+.|+|||++.+..++. ++||||+||++|....... ..+... .+.........
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l 226 (321)
T cd05603 151 -ETTSTFCGTPEYLAPEVLRKEPYDR---TVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDL 226 (321)
T ss_pred -CccccccCCcccCCHHHhcCCCCCC---cCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence 1122367999999999998877655 4999999999982211110 111111 11122334567
Q ss_pred HHHhhCCCCCCCCC
Q 041467 693 FLSLLSPSCSVFPL 706 (746)
Q Consensus 693 ~~~~~~~~~~~~p~ 706 (746)
+..|+..++..||.
T Consensus 227 i~~~l~~~p~~R~~ 240 (321)
T cd05603 227 LVGLLHKDQRRRLG 240 (321)
T ss_pred HHHHccCCHhhcCC
Confidence 77777777776664
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-32 Score=272.56 Aligned_cols=182 Identities=23% Similarity=0.301 Sum_probs=149.2
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhc--CCCCceeeEEEEEecCC----cccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRN--IRHRNLIKIITICSSID----FEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~~~~~~~~----~~~l 545 (746)
..+.+..+.||+|.||+||+ ||||++.. ...+.+.||.++.+. ++|+||++++++-..+. ..|+
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred hheeEEEEEecCccccceeeccccCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 34567889999999999997 99999963 344567888887765 59999999998765543 6899
Q ss_pred hhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 546 DFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRH-----HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 546 v~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~-----~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
|++|.+.|+|. ...++.+..++++..+|.||++||. +..|.|.|||||+.|||+..++...|+|+|+|-..
T Consensus 287 vTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h 366 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 366 (513)
T ss_pred eeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEe
Confidence 99999999997 5678999999999999999999996 45789999999999999999999999999999765
Q ss_pred cCCCCCCCccccccccccccccccccccccccc----ccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAAR----NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .........+||.+|||||++... .+.. -+++||||||.|++
T Consensus 367 ~~~t~----~idi~~N~rVGTKRYMAPEvLdetin~~~Fes-yk~ADIYafgLVlW 417 (513)
T KOG2052|consen 367 DSDTD----TIDIPPNPRVGTKRYMAPEVLDETINMKHFES-YKRADIYAFGLVLW 417 (513)
T ss_pred cccCC----cccCCCCCccceeeccChHHhhhhcChhhhhh-hhHHHHHHHHHHHH
Confidence 44322 122233457999999999999743 2222 46799999999998
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=253.11 Aligned_cols=218 Identities=17% Similarity=0.207 Sum_probs=170.8
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+.+.+..+|.|+.|.|++ .|||...... ++..++..+.++++.+.+ .|+||+.+|||......++.||.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 345567899999999997 7999887553 556678888888877765 89999999999999999999999
Q ss_pred ccCC---ccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 550 ISNG---QLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 550 ~~~g---~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
|... .++ ..++++.-.-++...+.+||.||.+.| +|+|||+||+|||+|+.|.+|+||||++..+.+...
T Consensus 173 Ms~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA--- 247 (391)
T KOG0983|consen 173 MSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA--- 247 (391)
T ss_pred HHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecccc---
Confidence 8432 222 567888888899999999999999987 999999999999999999999999999988754433
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee------------ccccccccchhhcccc-------C
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA------------LNEKKQNKSILKSAGI-------K 685 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~------------~~~~~~~~~i~~~~~~-------~ 685 (746)
.+..+|.+.|||||.+.-...+.|+.++||||||+.++ ..+++....+.+..|. .
T Consensus 248 ------htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gF 321 (391)
T KOG0983|consen 248 ------HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGF 321 (391)
T ss_pred ------cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCc
Confidence 22367999999999998776666778899999999888 2344445555554331 1
Q ss_pred CCccHHHHHHhhCCCCCCCCCCCC
Q 041467 686 GKKTVSFFLSLLSPSCSVFPLTPS 709 (746)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~p~~p~ 709 (746)
+..+.+.+..|+.++...||+.+.
T Consensus 322 Sp~F~~fv~~CL~kd~r~RP~Y~~ 345 (391)
T KOG0983|consen 322 SPDFQSFVKDCLTKDHRKRPKYNK 345 (391)
T ss_pred CHHHHHHHHHHhhcCcccCcchHH
Confidence 234556667777777777775443
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-31 Score=283.85 Aligned_cols=183 Identities=19% Similarity=0.246 Sum_probs=153.6
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 3688899999999999996 8999986543 234567899999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+++|++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 157 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR 157 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence 999999885 34689999999999999999999998 9999999999999999999999999999876433200
Q ss_pred ---------------------CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 ---------------------TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ---------------------~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.............||+.|+|||++.+..++.+ +|||||||++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwSlG~il~ 221 (350)
T cd05573 158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLE---CDWWSLGVILY 221 (350)
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCc---eeeEecchhhh
Confidence 00000112234679999999999998866554 99999999998
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=282.10 Aligned_cols=207 Identities=21% Similarity=0.196 Sum_probs=160.6
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||||++.... ....+.+..|+++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4689999999996 8999986542 23345677899998876 799999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~------- 150 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG------- 150 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC-------
Confidence 9885 45689999999999999999999999 99999999999999999999999999987532211
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhccc----cCCCccHHH
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSAG----IKGKKTVSF 692 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~~----~~~~~~~~~ 692 (746)
.......||+.|+|||++.+..++.+ +||||+||++|...... ...+..... ..+.+..+.
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~---~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~l 226 (321)
T cd05591 151 -VTTTTFCGTPDYIAPEILQELEYGPS---VDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSI 226 (321)
T ss_pred -ccccccccCccccCHHHHcCCCCCCc---cceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 11234679999999999988776554 99999999998221111 111111111 123455667
Q ss_pred HHHhhCCCCCCCCC
Q 041467 693 FLSLLSPSCSVFPL 706 (746)
Q Consensus 693 ~~~~~~~~~~~~p~ 706 (746)
+..|+..++..||.
T Consensus 227 l~~~L~~dp~~R~~ 240 (321)
T cd05591 227 LKAFMTKNPNKRLG 240 (321)
T ss_pred HHHHhccCHHHcCC
Confidence 77888777776663
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=280.74 Aligned_cols=179 Identities=22% Similarity=0.215 Sum_probs=149.7
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4688999999999999996 8999986432 233456889999999999999999999999999999999
Q ss_pred hhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 548 KAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 548 e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||+++|+|. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 999999985 34689999999999999999999999 999999999999999999999999999976532211
Q ss_pred CCCcccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|||||++.... ...++.++||||+||++|
T Consensus 158 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~ 199 (331)
T cd05597 158 -------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMY 199 (331)
T ss_pred -------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHH
Confidence 1112256999999999997421 122355699999999998
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-31 Score=281.59 Aligned_cols=176 Identities=26% Similarity=0.361 Sum_probs=154.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhh---hhHHHHHHHHHhhcCC-CCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE---ASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~---~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~ 544 (746)
....|+..+.+|+|.||.||+ +|+|++.+.... ....+.+|+++|+++. |||||.++++|++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 456788899999999999996 899999766433 3468999999999999 999999999999999999
Q ss_pred chhhhccCCccc---cc-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC----CCcEEEccccccccc
Q 041467 545 FDFKAISNGQLR---LC-NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ----DVVTHVGDLGLAKFL 616 (746)
Q Consensus 545 lv~e~~~~g~l~---~~-~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~----~~~~ki~DfGla~~~ 616 (746)
+|||++.+|.|. .. .+++..+..++.|++.|++|||+. +|||||+||+|+|+.. ++.+|++|||+|...
T Consensus 113 lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~ 189 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI 189 (382)
T ss_pred EEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence 999999999986 22 399999999999999999999999 9999999999999953 358999999999886
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. .......+||+.|+|||++....|+.. +||||+||++|
T Consensus 190 ~~---------~~~~~~~~Gtp~y~APEvl~~~~y~~~---~DiWS~Gvi~y 229 (382)
T KOG0032|consen 190 KP---------GERLHTIVGTPEYVAPEVLGGRPYGDE---VDVWSIGVILY 229 (382)
T ss_pred cC---------CceEeeecCCccccCchhhcCCCCCcc---cchhHHHHHHH
Confidence 43 233456899999999999998877665 99999999999
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-32 Score=302.52 Aligned_cols=216 Identities=18% Similarity=0.216 Sum_probs=178.1
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSID 541 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~ 541 (746)
++.-..++|++.++||+|+||.|.. ||+|++++.. ......|+.|-++|..-+.+-||.+.-+|.+..
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 4445568999999999999999985 7999987653 233456899999999999999999999999999
Q ss_pred cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 542 FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
+.|+|||||+||++- ...+++..++.|..+|+-|++-+|+. |+|||||||+|||||..|++|+||||.|-.+
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKM 225 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhc
Confidence 999999999999984 34799999999999999999999999 9999999999999999999999999999877
Q ss_pred cCCCCCCCcccccccccccccccccccccccccc--cccCCCccceeeccceeeccccccccchhhccccCCCccHHHHH
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFALNEKKQNKSILKSAGIKGKKTVSFFL 694 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 694 (746)
..++. ..+...+|||-|++||++.... -+.|++.+|+||+||++| ..++...|++.+.+...+.
T Consensus 226 ~~dG~-------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~Y-------EMlyG~TPFYadslveTY~ 291 (1317)
T KOG0612|consen 226 DADGT-------VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMY-------EMLYGETPFYADSLVETYG 291 (1317)
T ss_pred CCCCc-------EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHH-------HHHcCCCcchHHHHHHHHH
Confidence 54432 2334578999999999998432 245688899999999999 4455556666666666666
Q ss_pred HhhCCC-CCCCCC
Q 041467 695 SLLSPS-CSVFPL 706 (746)
Q Consensus 695 ~~~~~~-~~~~p~ 706 (746)
.+|+.. ...+|.
T Consensus 292 KIm~hk~~l~FP~ 304 (1317)
T KOG0612|consen 292 KIMNHKESLSFPD 304 (1317)
T ss_pred HHhchhhhcCCCc
Confidence 666653 345664
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=280.65 Aligned_cols=169 Identities=20% Similarity=0.231 Sum_probs=142.8
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhc-CCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRN-IRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~-l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||+|+++... ....+....|.+++.. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999996 8999986542 2334557778888875 4899999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|++. ...+++.++..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-------- 149 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-------- 149 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccC--------
Confidence 9985 45689999999999999999999999 9999999999999999999999999998743111
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......+||+.|+|||++.+..++.+ +||||+||++|
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslGvil~ 187 (316)
T cd05620 150 DNRASTFCGTPDYIAPEILQGLKYTFS---VDWWSFGVLLY 187 (316)
T ss_pred CCceeccCCCcCccCHHHHcCCCCCcc---cchhhhHHHHH
Confidence 112234679999999999988777554 99999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-31 Score=281.06 Aligned_cols=169 Identities=21% Similarity=0.239 Sum_probs=144.8
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||||+++... ....+.+.+|+.+++++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4689999999996 8999987542 23345688999999998 699999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-------- 149 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-------- 149 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccC--------
Confidence 9885 45789999999999999999999999 9999999999999999999999999998753111
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~~l~ 187 (329)
T cd05588 150 GDTTSTFCGTPNYIAPEILRGEDYGF---SVDWWALGVLMF 187 (329)
T ss_pred CCccccccCCccccCHHHHcCCCCCC---ccceechHHHHH
Confidence 11123467999999999998877654 499999999998
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=275.20 Aligned_cols=178 Identities=19% Similarity=0.228 Sum_probs=146.0
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhh--hhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLK--QKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..|+..+.||+||.+.||+ ||+|++... +.+....|..|+..|.+|+ |.+||++++|-..+++.|+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 4689999999999999998 677776543 3455678999999999997 9999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|=. -+|. ....+.-.++.|+.|++.|+.++|.+ +|||.||||.|+|+= .|.+||+|||+|..+..+.+.
T Consensus 441 ~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTs 515 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTS 515 (677)
T ss_pred ccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhcccCccccc
Confidence 731 2222 12233238999999999999999999 999999999999984 589999999999988665432
Q ss_pred CCcccccccccccccccccccccccccccccC--------CCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENR--------EKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~--------~~~~DiwSlG~i~~ 668 (746)
......+||+.|||||++....++.. ++++||||+|||+|
T Consensus 516 ------I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILY 563 (677)
T KOG0596|consen 516 ------IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILY 563 (677)
T ss_pred ------eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHH
Confidence 23345899999999999987665521 56799999999999
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=289.23 Aligned_cols=170 Identities=24% Similarity=0.316 Sum_probs=145.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
..+|+..+.||+|+||.||+ ||+|+.. .+.+.+|++++++++|||||++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 35799999999999999996 8998653 23478999999999999999999999999999999999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+. +++. ...+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|+......
T Consensus 165 ~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~---- 236 (391)
T PHA03212 165 YK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN---- 236 (391)
T ss_pred CC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccc----
Confidence 86 4443 45689999999999999999999999 99999999999999999999999999997542211
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 237 ---~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlGvil~ 274 (391)
T PHA03212 237 ---ANKYYGWAGTIATNAPELLARDPYGP---AVDIWSAGIVLF 274 (391)
T ss_pred ---ccccccccCccCCCChhhhcCCCCCc---HHHHHHHHHHHH
Confidence 11223468999999999998876654 599999999998
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-31 Score=279.60 Aligned_cols=215 Identities=19% Similarity=0.229 Sum_probs=175.0
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
...+.|.....||+|.|+.|.. ||||.+.+... ...+.+.+|+++|+.++|||||+++.+.......|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 4567788999999999999985 99999976642 334568999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||+.+|.++ .....+..+..++.|+..|++|+|++ .|||||||++||||++++.+||+|||++..+...
T Consensus 133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~- 208 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDYG- 208 (596)
T ss_pred EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeeccc-
Confidence 99999999986 45667799999999999999999999 9999999999999999999999999999887421
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceeec-----cccc--ccc--------chhhccccC
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFAL-----NEKK--QNK--------SILKSAGIK 685 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~-----~~~~--~~~--------~i~~~~~~~ 685 (746)
....+++|++.|.|||++.+.+|+ ++.+|+||+|+++|. ..++ ..+ .-++..-..
T Consensus 209 --------~~lqt~cgsppyAaPEl~~g~~y~--gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~m 278 (596)
T KOG0586|consen 209 --------LMLQTFCGSPPYAAPELFNGKKYD--GPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYM 278 (596)
T ss_pred --------ccccccCCCCCccChHhhcCcccC--CcceehhhhhhhheeeeecccccCCcccccccchheeeeeccccee
Confidence 223358999999999999999875 458999999999991 1111 111 112233344
Q ss_pred CCccHHHHHHhhCCCCCCCC
Q 041467 686 GKKTVSFFLSLLSPSCSVFP 705 (746)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~p 705 (746)
..++...+.+++-..+..++
T Consensus 279 s~dce~lLrk~lvl~Pskr~ 298 (596)
T KOG0586|consen 279 SCDCEDLLRKFLVLNPSKRG 298 (596)
T ss_pred echhHHHHHHhhccCccccC
Confidence 46777788877776665444
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=259.52 Aligned_cols=188 Identities=19% Similarity=0.291 Sum_probs=155.9
Q ss_pred HHHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCC
Q 041467 472 HAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSID 541 (746)
Q Consensus 472 ~~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~ 541 (746)
++++.+.+ .+.+|+|+|+.|-. ||||++.+.......++.||++++..++ |+||++++++|+++.
T Consensus 75 F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 75 FEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred HHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 45555554 46899999999974 8999998877777888999999999997 999999999999999
Q ss_pred cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC---CcEEEcccccc
Q 041467 542 FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD---VVTHVGDLGLA 613 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~---~~~ki~DfGla 613 (746)
..|+|||-|.+|.+- ...+++.++.+++++||.||+|||.+ +|.|||+||+|||-.+. .-+|||||.++
T Consensus 150 ~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLg 226 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLG 226 (463)
T ss_pred eEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccc
Confidence 999999999999874 56799999999999999999999999 99999999999998643 45899999888
Q ss_pred ccccCCCCCCCccccccccccccccccccccccc--ccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA--ARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..+.....-.... .....+.+|+..|||||++. -...+.|++++|.||+|||+|
T Consensus 227 Sg~k~~~~~spas-tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlY 282 (463)
T KOG0607|consen 227 SGIKLNNDCSPAS-TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILY 282 (463)
T ss_pred cccccCCCCCCCC-CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHH
Confidence 6654332222111 12345688999999999986 334455688899999999999
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-31 Score=275.80 Aligned_cols=173 Identities=25% Similarity=0.298 Sum_probs=147.8
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 477889999999999997 8999886432 2223457889999999999999999999999999999999
Q ss_pred hccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 549 AISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 549 ~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 99999885 23589999999999999999999999 99999999999999999999999999997653211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||..|+|||++.+..++. ++||||+||++|
T Consensus 157 --------~~~~~~~~~~y~aPE~~~~~~~~~---~~Diws~G~~l~ 192 (285)
T cd05605 157 --------TIRGRVGTVGYMAPEVVKNERYTF---SPDWWGLGCLIY 192 (285)
T ss_pred --------ccccccCCCCccCcHHhcCCCCCc---cccchhHHHHHH
Confidence 112357899999999998776655 499999999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=277.21 Aligned_cols=225 Identities=20% Similarity=0.246 Sum_probs=171.3
Q ss_pred CCCCCCeEeecCCeeEEE--------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 481 NFSPANKIREGGFNIVYN--------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~--------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
.....+.||+|-||+|.. ||||.++... ....++|.+||++|.+++|||||+++|+|..++..++++|||+
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmE 618 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYME 618 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHh
Confidence 345689999999999974 9999998654 4456889999999999999999999999999999999999999
Q ss_pred CCccc-----c--cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 552 NGQLR-----L--CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 552 ~g~l~-----~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+|+|. + ....-....+|+.|||.|++||.+. ++||||+.++|+|+|.++++||||||++|-++..+...-
T Consensus 619 nGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 619 NGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred cCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 99996 1 1234556788999999999999999 999999999999999999999999999997764433210
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceeecc------------cccc----ccchhhc-----cc
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALN------------EKKQ----NKSILKS-----AG 683 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~------------~~~~----~~~i~~~-----~~ 683 (746)
. ...+=..+|||||.+...+++.+ +|||+||+.+|.. ..+| ..++++. ..
T Consensus 696 q------gr~vlpiRwmawEsillgkFtta---SDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l 766 (807)
T KOG1094|consen 696 Q------GRAVLPIRWMAWESILLGKFTTA---SDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVL 766 (807)
T ss_pred e------cceeeeeeehhHHHHHhccccch---hhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceec
Confidence 0 01233578999999999999776 9999999998810 0000 1111211 11
Q ss_pred cCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 684 IKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
..+.-+...+.++|-+||...-+ ||+....+..+
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~l 801 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFL 801 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHH
Confidence 22234455566777777755554 88887666544
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-31 Score=279.32 Aligned_cols=169 Identities=22% Similarity=0.282 Sum_probs=142.8
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhc-CCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRN-IRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~-l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||||+++... ....+.+..|..+++. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4699999999996 8999887542 2334557778888876 5899999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|+|. ...+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~------- 150 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD------- 150 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-------
Confidence 9986 34689999999999999999999999 99999999999999999999999999987532111
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|||||++.+..++. ++||||+||++|
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslG~il~ 187 (316)
T cd05619 151 -AKTCTFCGTPDYIAPEILLGQKYNT---SVDWWSFGVLLY 187 (316)
T ss_pred -CceeeecCCccccCHHHHcCCCCCc---hhhhhhHHHHHH
Confidence 1123467999999999998877655 499999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-32 Score=276.05 Aligned_cols=181 Identities=25% Similarity=0.297 Sum_probs=149.9
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhc--CCCCceeeEEEEEecCC----cccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRN--IRHRNLIKIITICSSID----FEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~~~~~~~~----~~~l 545 (746)
....+..+.||+|+||.||| ||||++... ..+.|..|-++.+. ++|+||++++++-.... ..++
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CCchhhHHHhhcCccceeehhhccCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 34556788999999999998 999999744 34457777776655 57999999999877665 7889
Q ss_pred hhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhc------CCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 546 DFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHH------CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 546 v~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~------~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
|++|.++|+|. ....+|....+++..+++||+|||+. +.|+|+|||||++||||..|++..|+|||+|..
T Consensus 286 Vt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred EeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 99999999996 56789999999999999999999974 457999999999999999999999999999998
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccc---cCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLE---NREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~---~~~~~~DiwSlG~i~~ 668 (746)
+....+ .....+.+||.+|||||++.+.--- ..-+++||||+|.|++
T Consensus 366 ~~p~~~------~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLW 415 (534)
T KOG3653|consen 366 LEPGKP------QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLW 415 (534)
T ss_pred ecCCCC------CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHH
Confidence 864333 2334458999999999999865321 1244699999999998
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=287.95 Aligned_cols=232 Identities=19% Similarity=0.182 Sum_probs=174.1
Q ss_pred hhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCC-CCceeeEEEEEecC
Q 041467 477 KATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIR-HRNLIKIITICSSI 540 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~ 540 (746)
...++|++.+.||+|+||.||+ ||||++.... ....+.+.+|++++++++ |||||+++++|.+.
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 3456888999999999999984 7999886432 233467899999999996 99999999999999
Q ss_pred CcccchhhhccCCcccc---------------------------------------------------------------
Q 041467 541 DFEGFDFKAISNGQLRL--------------------------------------------------------------- 557 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~~--------------------------------------------------------------- 557 (746)
+..++|||||++|+|..
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 99999999999988740
Q ss_pred --------------------------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee
Q 041467 558 --------------------------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599 (746)
Q Consensus 558 --------------------------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl 599 (746)
..+++.++..++.|+++|++|||+. +|+||||||+||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEE
Confidence 1367788899999999999999999 99999999999999
Q ss_pred CCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--cccc--
Q 041467 600 DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQN-- 675 (746)
Q Consensus 600 ~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~~-- 675 (746)
++++.+||+|||+++........ .......|+..|||||++.+..++. ++|||||||++|... ....
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~---~~DiwSlGvil~ellt~g~~P~~ 341 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNY------VSKGSTFLPVKWMAPESIFDNLYTT---LSDVWSYGILLWEIFSLGGTPYP 341 (400)
T ss_pred eCCCEEEEEeCCcceeccccccc------cccCCcCCCcceEChhhhcCCCCCc---hhhHHHHHHHHHHHHHCCCCCCc
Confidence 99999999999999865322111 1122345678899999998776654 499999999988321 1100
Q ss_pred -----cchh---hc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 676 -----KSIL---KS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 676 -----~~i~---~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
..+. .. .........+.+..++..|+...|+ ||+..++...++++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 342 GMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred ccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 0000 00 0111123345566677777777777 88888777666553
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=285.35 Aligned_cols=177 Identities=20% Similarity=0.244 Sum_probs=148.4
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC----
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID---- 541 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~---- 541 (746)
...++|+..+.||+|+||.||+ ||||++... .....+.+.+|+.+++.++||||+++++++....
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 3457899999999999999997 899988643 2334567889999999999999999999986543
Q ss_pred --cccchhhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 542 --FEGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 542 --~~~lv~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
..++||||+.++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 98 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 98 FQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred cceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 468999999766443 44688999999999999999999999 99999999999999999999999999997542
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. .......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 175 ~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~---~DiwSlG~il~ 213 (359)
T cd07876 175 TN---------FMMTPYVVTRYYRAPEVILGMGYKEN---VDIWSVGCIMG 213 (359)
T ss_pred cC---------ccCCCCcccCCCCCchhccCCCCCcc---hhhHHHHHHHH
Confidence 21 11233678999999999988777655 99999999998
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=277.80 Aligned_cols=176 Identities=19% Similarity=0.275 Sum_probs=150.2
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 3688999999999999996 8999886432 2334568899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|++++.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 155 (287)
T cd07848 81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-- 155 (287)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccc--
Confidence 99988664 34689999999999999999999999 999999999999999999999999999987532211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+..++. ++||||+||++|
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~---~~DiwslGvil~ 192 (287)
T cd07848 156 -----ANYTEYVATRWYRSPELLLGAPYGK---AVDMWSVGCILG 192 (287)
T ss_pred -----ccccccccccccCCcHHHcCCCCCC---chhHHhHHHHHH
Confidence 1122357899999999998877654 599999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-31 Score=279.43 Aligned_cols=169 Identities=20% Similarity=0.232 Sum_probs=144.0
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||||++.... ......+.+|+++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999996 8999887542 23345678899999888 699999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------- 150 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG------- 150 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-------
Confidence 9885 44789999999999999999999999 99999999999999999999999999987532111
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+..++.+ +||||+||++|
T Consensus 151 -~~~~~~~g~~~y~aPE~~~~~~~~~~---~DiwslGvil~ 187 (318)
T cd05570 151 -VTTSTFCGTPDYIAPEILSYQPYGPA---VDWWALGVLLY 187 (318)
T ss_pred -CcccceecCccccCHHHhcCCCCCcc---hhhhhHHHHHH
Confidence 11223578999999999988777554 99999999998
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-31 Score=279.17 Aligned_cols=226 Identities=19% Similarity=0.213 Sum_probs=168.0
Q ss_pred cCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
.+|+..+.||+|+||.||+ ||||++.... ....+++.+|+.+++.++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 4688999999999999996 6889876432 34456789999999999999999999999864 5779
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
++||+++|++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccccCC
Confidence 99999999885 33578999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-c-c---------ccchhhccc--cCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-K-Q---------NKSILKSAG--IKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~-~---------~~~i~~~~~--~~~ 686 (746)
... .......++..|+|||++.+..++. ++|||||||++|.... . . ...+..... ...
T Consensus 163 ~~~------~~~~~~~~~~~y~apE~~~~~~~~~---~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 233 (316)
T cd05108 163 EKE------YHAEGGKVPIKWMALESILHRIYTH---QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 233 (316)
T ss_pred Ccc------eeccCCccceeecChHHhccCCCCc---hhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCC
Confidence 211 1111233467899999998877655 4999999999883211 0 0 111111110 111
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
..+...+..++..|+...|. ||++.++...+.
T Consensus 234 ~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~ 266 (316)
T cd05108 234 PICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 266 (316)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22334455666666666676 888876554443
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=278.38 Aligned_cols=176 Identities=19% Similarity=0.281 Sum_probs=146.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||+|++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 46799999999999999997 8999886443 2234567899999999999999999999999889999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+.+ ++. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-- 157 (288)
T cd07871 84 YLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-- 157 (288)
T ss_pred CCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC--
Confidence 9975 553 23478999999999999999999999 99999999999999999999999999997642211
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+... ++.++||||+||++|
T Consensus 158 ------~~~~~~~~~~~y~aPE~~~~~~~--~~~~~DiwslG~~l~ 195 (288)
T cd07871 158 ------KTYSNEVVTLWYRPPDVLLGSTE--YSTPIDMWGVGCILY 195 (288)
T ss_pred ------ccccCceecccccChHHhcCCcc--cCcHHHHHHHHHHHH
Confidence 11233568999999999876432 234599999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=284.16 Aligned_cols=176 Identities=23% Similarity=0.301 Sum_probs=143.5
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----ccc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSID-----FEG 544 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~-----~~~ 544 (746)
+|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++||||+++++++.... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 478889999999999996 8999886432 233456889999999999999999999886533 478
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+||||+. +++. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999996 4553 34689999999999999999999999 9999999999999999999999999999865322
Q ss_pred CCCCCcccccccccccccccccccccccc--cccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAA--RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~~~~DiwSlG~i~~ 668 (746)
... .......+||+.|+|||++.+ ..+ +.++||||+||++|
T Consensus 157 ~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~---~~~~DvwSlGvvl~ 199 (338)
T cd07859 157 TPT-----AIFWTDYVATRWYRAPELCGSFFSKY---TPAIDIWSIGCIFA 199 (338)
T ss_pred cCc-----cccccCCCCCCCcCCHHHHhcccccc---CchhHHHHHHHHHH
Confidence 111 112234679999999999875 334 44699999999998
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=273.50 Aligned_cols=214 Identities=17% Similarity=0.248 Sum_probs=175.3
Q ss_pred hhcCCCCCCeEeecCCeeEE---------EEEeehhhhhhhh--hhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVY---------NVAMKVANLKQKE--ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~---------~vavK~~~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..+-|...+.||+|.|+.|- +||||++.+.... ....+.+|++.|+.++|||||++|++.......|+|
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 34568888999999999875 3999999866533 334678999999999999999999999999999999
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee-CCCCcEEEccccccccccCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL-DQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl-~~~~~~ki~DfGla~~~~~~ 619 (746)
+|+=.+|++. ...+.++-+.+++.||+.|+.|+|.. .+|||||||+||.+ ..-|-+|++|||++..+.
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~-- 170 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ-- 170 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCC--
Confidence 9999999886 45689999999999999999999999 89999999999987 467999999999997652
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee-----------ccccccccchhhccc----c
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA-----------LNEKKQNKSILKSAG----I 684 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~-----------~~~~~~~~~i~~~~~----~ 684 (746)
......+.||+..|-|||++.|..|+.. ++||||+|||+| .++.+.+..|++... .
T Consensus 171 -------PG~kL~TsCGSLAYSAPEILLGDsYDAP--AVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPsh 241 (864)
T KOG4717|consen 171 -------PGKKLTTSCGSLAYSAPEILLGDSYDAP--AVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSH 241 (864)
T ss_pred -------CcchhhcccchhhccCchhhhcCccCCc--chhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchh
Confidence 2344556899999999999999999765 899999999999 233334455655433 2
Q ss_pred CCCccHHHHHHhhCCCCCCCC
Q 041467 685 KGKKTVSFFLSLLSPSCSVFP 705 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p 705 (746)
.+.++.++|.+|+.++|.+|.
T Consensus 242 vS~eCrdLI~sMLvRdPkkRA 262 (864)
T KOG4717|consen 242 VSKECRDLIQSMLVRDPKKRA 262 (864)
T ss_pred hhHHHHHHHHHHHhcCchhhc
Confidence 336778888888887765433
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=278.63 Aligned_cols=169 Identities=21% Similarity=0.237 Sum_probs=144.8
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||+|++.... ....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999996 8999987542 23455688999999888 599999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~------- 150 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG------- 150 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-------
Confidence 9985 45799999999999999999999999 99999999999999999999999999987532111
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslGvil~ 187 (327)
T cd05617 151 -DTTSTFCGTPNYIAPEILRGEEYGF---SVDWWALGVLMF 187 (327)
T ss_pred -CceecccCCcccCCHHHHCCCCCCc---hheeehhHHHHH
Confidence 1123467999999999998877755 499999999998
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=279.41 Aligned_cols=174 Identities=20% Similarity=0.250 Sum_probs=146.9
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~ 547 (746)
+|+..+.||+|+||.||+ ||||++.... ....+.+..|+++++.+. ||+|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 467789999999999996 8999886542 233456788999998886 577888999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+++|+|. ...+++.++..++.|++.|++|||++ +|+||||||+||++++++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~-- 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG-- 155 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCCC--
Confidence 999999985 35689999999999999999999999 99999999999999999999999999987542211
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|||||++.+..++. ++||||+||++|
T Consensus 156 ------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslGvil~ 192 (323)
T cd05615 156 ------VTTRTFCGTPDYIAPEIIAYQPYGK---SVDWWAYGVLLY 192 (323)
T ss_pred ------ccccCccCCccccCHHHHcCCCCCC---ccchhhhHHHHH
Confidence 1122357999999999998876654 599999999998
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-31 Score=274.52 Aligned_cols=167 Identities=23% Similarity=0.306 Sum_probs=143.0
Q ss_pred EeecCCeeEEE---------EEeehhhhhhh---hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCcc
Q 041467 488 IREGGFNIVYN---------VAMKVANLKQK---EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL 555 (746)
Q Consensus 488 ig~g~~g~v~~---------vavK~~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l 555 (746)
||+|+||+||+ ||+|++..... ...+.+..|++++++++||||+++.+++......++||||+++|++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 68999999996 89998864422 2335678899999999999999999999999999999999999988
Q ss_pred c---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcc
Q 041467 556 R---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626 (746)
Q Consensus 556 ~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~ 626 (746)
. ...+++..+..++.||+.|++|||+. +|+||||||+||++++++.+||+|||+++.+.....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~----- 152 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS----- 152 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-----
Confidence 4 23589999999999999999999999 999999999999999999999999999976532211
Q ss_pred cccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 627 TASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 627 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+..++. ++||||+||++|
T Consensus 153 ---~~~~~~g~~~y~aPE~~~~~~~~~---~~DvwslG~il~ 188 (280)
T cd05608 153 ---KTKGYAGTPGFMAPELLQGEEYDF---SVDYFALGVTLY 188 (280)
T ss_pred ---cccccCCCcCccCHHHhcCCCCCc---cccHHHHHHHHH
Confidence 122367899999999999887754 499999999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-31 Score=280.23 Aligned_cols=175 Identities=19% Similarity=0.289 Sum_probs=150.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||+|++.... ......+.+|++++++++|||||+++++|.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 36899999999999999996 7888876542 2344678999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+++|+|. ...+++..+..++.|++.|++|||+.+ +|+||||||+||++++++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---- 157 (333)
T cd06650 84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 157 (333)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh----
Confidence 99999986 346889999999999999999999852 7999999999999999999999999999765221
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||..|+|||++.+..++. ++||||+||++|
T Consensus 158 ------~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwslG~il~ 193 (333)
T cd06650 158 ------MANSFVGTRSYMSPERLQGTHYSV---QSDIWSMGLSLV 193 (333)
T ss_pred ------ccccCCCCccccCHHHhcCCCCCc---HHHHHHHHHHHH
Confidence 112356899999999998776654 499999999998
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=275.64 Aligned_cols=179 Identities=21% Similarity=0.201 Sum_probs=148.7
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||+|++.... ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 4688899999999999996 8999885432 223445889999999999999999999999999999999
Q ss_pred hhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 548 KAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 548 e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||+++|+|. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 999999985 34689999999999999999999999 999999999999999999999999999976532211
Q ss_pred CCCcccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|||||++.+.. ...++.++|||||||++|
T Consensus 158 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ 199 (332)
T cd05623 158 -------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMY 199 (332)
T ss_pred -------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHH
Confidence 1112357999999999987421 112345699999999998
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-31 Score=274.14 Aligned_cols=173 Identities=22% Similarity=0.368 Sum_probs=140.2
Q ss_pred cCCCCCCeEeecCCeeEEE----------EEeehhhhhh--hhhhHHHHHHHHHhhcC---CCCceeeEEEEEec-----
Q 041467 480 NNFSPANKIREGGFNIVYN----------VAMKVANLKQ--KEASRSFAAEFNALRNI---RHRNLIKIITICSS----- 539 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~----------vavK~~~~~~--~~~~~~~~~E~~~l~~l---~HpnIv~l~~~~~~----- 539 (746)
.+|+..+.||+|+||.||+ ||||++.... ......+.+|+.+++.+ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 3688999999999999996 7899876432 22234566777777665 69999999999863
Q ss_pred CCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccc
Q 041467 540 IDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGl 612 (746)
....++||||+.+ ++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 3457899999964 443 23578999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++..... .......||+.|+|||++.+..++. ++||||+||++|
T Consensus 157 ~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~---~~DiwslG~il~ 200 (290)
T cd07862 157 ARIYSFQ---------MALTSVVVTLWYRAPEVLLQSSYAT---PVDLWSVGCIFA 200 (290)
T ss_pred eEeccCC---------cccccccccccccChHHHhCCCCCC---ccchHHHHHHHH
Confidence 9865321 1123467899999999998776654 499999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=275.32 Aligned_cols=179 Identities=21% Similarity=0.220 Sum_probs=149.5
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||+|++.... ......+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4688999999999999996 8999886432 233456888999999999999999999999999999999
Q ss_pred hhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 548 KAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 548 e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||+++|+|. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 999999986 34688999999999999999999999 999999999999999999999999999986533211
Q ss_pred CCCcccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|||||++.+.. ...++.++||||+||++|
T Consensus 158 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ 199 (331)
T cd05624 158 -------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMY 199 (331)
T ss_pred -------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhh
Confidence 1112357999999999987531 112345699999999998
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=268.06 Aligned_cols=165 Identities=20% Similarity=0.325 Sum_probs=139.0
Q ss_pred CeEeecCCeeEEE---------------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 486 NKIREGGFNIVYN---------------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
+.||+|+||.||+ ||+|++........+.+.+|+.+++.++|||||++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 4689999999994 6778776555555667899999999999999999999999999999
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc-------EEEcccc
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV-------THVGDLG 611 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~-------~ki~DfG 611 (746)
++|||+++|.+. ...+++.++..++.||++|++|||+. +|+||||||+||+++.++. +|++|||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 999999999875 34589999999999999999999999 9999999999999986654 8999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
++..... .....|+..|||||++.. ..++ .++|||||||++|
T Consensus 158 ~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~---~~~DiwslG~~l~ 200 (262)
T cd05077 158 IPITVLS------------RQECVERIPWIAPECVEDSKNLS---IAADKWSFGTTLW 200 (262)
T ss_pred CCccccC------------cccccccccccChhhhcCCCCCC---chhHHHHHHHHHH
Confidence 9875421 112457889999998874 3343 3599999999998
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-31 Score=277.17 Aligned_cols=171 Identities=23% Similarity=0.372 Sum_probs=148.9
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCccc
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR 556 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~ 556 (746)
-++|+|.||+||. +|||-+..+..+..+-+..||.+.+.++|.|||+++|.|...++.-+-||-+++|+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 4899999999994 8999998877777788899999999999999999999999999999999999999986
Q ss_pred ------ccCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-CCCcEEEccccccccccCCCCCCCccc
Q 041467 557 ------LCNL--SLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 557 ------~~~l--~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
-.++ .+..+-.+-+||++||.|||++ .|||||||-.|||++ -.|.+||+|||.++.+..-.+
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP------ 731 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP------ 731 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCc------
Confidence 2344 6788899999999999999999 999999999999996 579999999999988754332
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.+.++.||..|||||++..++- .|++++|||||||.+.
T Consensus 732 --~TETFTGTLQYMAPEvIDqG~R-GYG~aADIWS~GCT~v 769 (1226)
T KOG4279|consen 732 --CTETFTGTLQYMAPEVIDQGPR-GYGKAADIWSFGCTMV 769 (1226)
T ss_pred --cccccccchhhhChHhhccCCc-CCCchhhhhhccceeE
Confidence 1234789999999999986543 3577899999999887
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=292.19 Aligned_cols=172 Identities=24% Similarity=0.295 Sum_probs=139.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--------
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI-------- 540 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~-------- 540 (746)
...+|+..+.||+|+||.||+ ||||++... .....+|+.+++.++|||||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 346799999999999999996 899987432 22346799999999999999999987542
Q ss_pred CcccchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC-CcEEEcccc
Q 041467 541 DFEGFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-VVTHVGDLG 611 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~-~~~ki~DfG 611 (746)
...++||||++++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||
T Consensus 140 ~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 140 IFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred eEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccc
Confidence 1356899999865322 35689999999999999999999999 99999999999999865 479999999
Q ss_pred ccccccCCCCCCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
+|+.+.... ......||+.|||||++.+. .+ +.++||||+||++|
T Consensus 217 la~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~---~~~~DiwSlGvil~ 262 (440)
T PTZ00036 217 SAKNLLAGQ---------RSVSYICSRFYRAPELMLGATNY---TTHIDLWSLGCIIA 262 (440)
T ss_pred cchhccCCC---------CcccCCCCcCccCHHHhcCCCCC---CcHHHHHHHHHHHH
Confidence 998753211 12346789999999998765 34 34599999999998
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=267.64 Aligned_cols=169 Identities=22% Similarity=0.334 Sum_probs=147.7
Q ss_pred CCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCC
Q 041467 485 ANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG 553 (746)
Q Consensus 485 ~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g 553 (746)
.+++|+|-||+||- ||||++.+-. .+....++.|+.+|++++||.||.+.-.|+..+..++|||.+.+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 57999999999994 9999986542 233466899999999999999999999999999999999999776
Q ss_pred ccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC---CcEEEccccccccccCCCCCCC
Q 041467 554 QLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD---VVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 554 ~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~---~~~ki~DfGla~~~~~~~~~~~ 624 (746)
.|+ ..++++.....++.||+.||.|||.. +|||+||||+|||+... -.+|+||||+||++.+.
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk----- 720 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK----- 720 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchh-----
Confidence 665 66799999999999999999999999 99999999999999643 47999999999998543
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+...+++||+.|.|||++..+.|... -|+||.|||+|
T Consensus 721 ----sFRrsVVGTPAYLaPEVLrnkGyNrS---LDMWSVGVIiY 757 (888)
T KOG4236|consen 721 ----SFRRSVVGTPAYLAPEVLRNKGYNRS---LDMWSVGVIIY 757 (888)
T ss_pred ----hhhhhhcCCccccCHHHHhhcccccc---ccceeeeEEEE
Confidence 22345899999999999999988655 99999999999
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=275.18 Aligned_cols=206 Identities=22% Similarity=0.179 Sum_probs=154.6
Q ss_pred EeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC---CCCceeeEEEEEecCCcccchhhhccC
Q 041467 488 IREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI---RHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 488 ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l---~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
||+|+||.||+ ||||++.... ......+.+|..++... +||||+++++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999996 8999986442 22233455677777665 699999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|++. ...+++..+..++.||++|++|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~------- 150 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN------- 150 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-------
Confidence 9885 45689999999999999999999999 99999999999999999999999999987532211
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceeecccccc-------ccchhh-----cccc----CCCccHH
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-------NKSILK-----SAGI----KGKKTVS 691 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-------~~~i~~-----~~~~----~~~~~~~ 691 (746)
......+||..|||||++.+... ++.++||||+||++|...... ...++. .... .+.....
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~--~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 227 (330)
T cd05586 151 -KTTNTFCGTTEYLAPEVLLDEKG--YTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQ 227 (330)
T ss_pred -CCccCccCCccccCHHHHcCCCC--CCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHH
Confidence 11234679999999999976532 234599999999998322111 011111 1111 1234456
Q ss_pred HHHHhhCCCCCCCCC
Q 041467 692 FFLSLLSPSCSVFPL 706 (746)
Q Consensus 692 ~~~~~~~~~~~~~p~ 706 (746)
.+..|+..++..||.
T Consensus 228 li~~~L~~~P~~R~~ 242 (330)
T cd05586 228 FVKGLLNRNPQHRLG 242 (330)
T ss_pred HHHHHcCCCHHHCCC
Confidence 677777777776664
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-31 Score=293.75 Aligned_cols=182 Identities=20% Similarity=0.262 Sum_probs=151.2
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC--
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSID-- 541 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~-- 541 (746)
.....++|+..+.||+|+||.||+ ||||++.... ......+.+|+.++..++|+||+++++.+...+
T Consensus 27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 334557899999999999999996 8999986442 334567889999999999999999988775433
Q ss_pred ------cccchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEE
Q 041467 542 ------FEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTH 606 (746)
Q Consensus 542 ------~~~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~k 606 (746)
..++||||+++|+|. ...+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+|
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEE
Confidence 357999999999985 24688999999999999999999999 999999999999999999999
Q ss_pred EccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 607 VGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 607 i~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+|||+++........ ......+||+.|||||++.+..++. ++|||||||++|
T Consensus 184 L~DFGls~~~~~~~~~------~~~~~~~Gt~~Y~aPE~~~~~~~s~---k~DVwSlGvily 236 (496)
T PTZ00283 184 LGDFGFSKMYAATVSD------DVGRTFCGTPYYVAPEIWRRKPYSK---KADMFSLGVLLY 236 (496)
T ss_pred EEecccCeeccccccc------cccccccCCcceeCHHHhCCCCCCc---HHHHHHHHHHHH
Confidence 9999999875432111 1123467999999999998877655 499999999998
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-32 Score=254.31 Aligned_cols=219 Identities=20% Similarity=0.273 Sum_probs=167.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC------
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSID------ 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------ 541 (746)
.+.|+....||+|.||+||+ ||+|++-... ........||+++++.++|+|++.+++.|....
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 35677888999999999996 8888765432 333456789999999999999999998886532
Q ss_pred --cccchhhhccC---Cccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccc
Q 041467 542 --FEGFDFKAISN---GQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614 (746)
Q Consensus 542 --~~~lv~e~~~~---g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~ 614 (746)
..|+||++|+. |.|. ..+++..++.+++.++..||.|+|.. .|+|||+||+|+||+.+|.+||+|||+||
T Consensus 96 r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 96 RATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred cceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccccc
Confidence 47999999964 3333 46789999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccccccchhhccccCCCccHHHHH
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQNKSILKSAGIKGKKTVSFFL 694 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 694 (746)
.+...+... ....+..+-|.+|++||.+.|..- ++++.|||+.||||+ +++...+...++....-.
T Consensus 173 ~fs~~~n~~----kprytnrvvTLwYrppEllLG~r~--yg~~iDiWgAgCima--------eMwtrspimqgnteqqql 238 (376)
T KOG0669|consen 173 AFSTSKNVV----KPRYTNRVVTLWYRPPELLLGDRE--YGPPIDIWGAGCIMA--------EMWTRSPIMQGNTEQQQL 238 (376)
T ss_pred ceecccccC----CCCcccceeeeecCCHHHhhcccc--cCCcchhHhHHHHHH--------HHHccCccccCChHHHHH
Confidence 875443322 233556778999999999998743 455799999999998 566655655554443333
Q ss_pred HhhCCC-CCCCCC-CCCccchh
Q 041467 695 SLLSPS-CSVFPL-TPSSNSFT 714 (746)
Q Consensus 695 ~~~~~~-~~~~p~-~p~~~~~~ 714 (746)
.+++.- -+..|+ +|.++...
T Consensus 239 ~~Is~LcGs~tkevWP~~d~lp 260 (376)
T KOG0669|consen 239 HLISQLCGSITKEVWPNVDNLP 260 (376)
T ss_pred HHHHHHhccCCcccCCCcccch
Confidence 333322 355555 77766444
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-30 Score=271.39 Aligned_cols=179 Identities=20% Similarity=0.319 Sum_probs=147.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 467899999999999999994 8899875322 2334568899999999999999999999999899
Q ss_pred ccchhhhccCCcccc---------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEE
Q 041467 543 EGFDFKAISNGQLRL---------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV 607 (746)
Q Consensus 543 ~~lv~e~~~~g~l~~---------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki 607 (746)
.++||||+++|+|.. ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+|+
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 999999999998851 1246788999999999999999998 9999999999999999999999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+|||+++........ .......++..|||||++.+..++.+ +|||||||++|
T Consensus 161 ~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 212 (277)
T cd05062 161 GDFGMTRDIYETDYY------RKGGKGLLPVRWMSPESLKDGVFTTY---SDVWSFGVVLW 212 (277)
T ss_pred CCCCCccccCCccee------ecCCCCccCHhhcChhHhhcCCcCch---hHHHHHHHHHH
Confidence 999999765332211 01112345788999999987766554 99999999988
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-30 Score=281.18 Aligned_cols=177 Identities=19% Similarity=0.235 Sum_probs=148.2
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC----
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID---- 541 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~---- 541 (746)
...++|+..+.||+|+||.||+ ||||++... .....+.+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3567899999999999999996 899988643 2334567889999999999999999999986543
Q ss_pred --cccchhhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 542 --FEGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 542 --~~~lv~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
..++||||+.++... ...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 94 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred cceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 468999999765443 45688999999999999999999999 99999999999999999999999999998642
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. .......||..|+|||++.+..++.+ +||||+||++|
T Consensus 171 ~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~---~DiwslG~il~ 209 (355)
T cd07874 171 TS---------FMMTPYVVTRYYRAPEVILGMGYKEN---VDIWSVGCIMG 209 (355)
T ss_pred Cc---------cccCCccccCCccCHHHHcCCCCCch---hhHHHHHHHHH
Confidence 21 11233678999999999988776554 99999999998
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-30 Score=268.41 Aligned_cols=179 Identities=18% Similarity=0.237 Sum_probs=151.5
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
..+|+..+.||+|+||.||+ ||+|++..........+.+|+.++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 45799999999999999996 899988655444455688999999999999999999999999999999999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+++|++. ...+++.++..++.|++.|++|||+. +|+|||+||+||+++.++.+||+|||+++.+....
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---- 160 (267)
T cd06646 88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI---- 160 (267)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecccc----
Confidence 9999885 34689999999999999999999999 99999999999999999999999999998653211
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......|+..|+|||.+........+.++||||+||++|
T Consensus 161 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~ 200 (267)
T cd06646 161 ----AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAI 200 (267)
T ss_pred ----cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHH
Confidence 1112356889999999986443333455699999999988
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-31 Score=295.09 Aligned_cols=186 Identities=23% Similarity=0.279 Sum_probs=158.6
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
...+-+++....||.|.||.||. .|+|-++... ....+...+|+.++..++|||+|++||+-.+.+..+
T Consensus 1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence 34555678889999999999997 6899887553 334556889999999999999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+-||||++|+|. .+..++.....+-.|++.|++|||+. |||||||||+||+++.+|.+|.+|||.|..+...
T Consensus 1311 IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 999999999996 34567777788899999999999999 9999999999999999999999999999988655
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+ ......+||+.|||||++.+.+......++||||+|||..
T Consensus 1388 ~~~~~----~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVl 1432 (1509)
T KOG4645|consen 1388 AQTMP----GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVL 1432 (1509)
T ss_pred hhcCC----HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEE
Confidence 32222 2233589999999999999887666677899999999887
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-30 Score=271.00 Aligned_cols=226 Identities=19% Similarity=0.293 Sum_probs=171.7
Q ss_pred cCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 480 NNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
++|+..+.||+|+||.||+ ||+|.+.... ......+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 4788899999999999995 7888775432 233557899999999999999999999999988999
Q ss_pred chhhhccCCccc-----c----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC
Q 041467 545 FDFKAISNGQLR-----L----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603 (746)
Q Consensus 545 lv~e~~~~g~l~-----~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~ 603 (746)
++|||+++|++. . ..+++.++..++.|++.|++|||+. +|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 999999999874 1 4578889999999999999999999 999999999999999999
Q ss_pred cEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--cccc------
Q 041467 604 VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQN------ 675 (746)
Q Consensus 604 ~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~~------ 675 (746)
.+||+|||+++........ .......+++.|+|||++.+..++. ++|||||||++|... ....
T Consensus 162 ~~~L~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~---~sDv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05048 162 TVKISDFGLSRDIYSADYY------RVQSKSLLPVRWMPPEAILYGKFTT---ESDIWSFGVVLWEIFSYGLQPYYGFSN 232 (283)
T ss_pred cEEECCCcceeeccccccc------cccCCCcccccccCHHHhccCcCch---hhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 9999999999865322111 1112245688999999998777655 499999999998321 1110
Q ss_pred cchhh----c-cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 676 KSILK----S-AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 676 ~~i~~----~-~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
.++.. . .........+.+..++..|+...|. ||++.++...+
T Consensus 233 ~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l 280 (283)
T cd05048 233 QEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRL 280 (283)
T ss_pred HHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 11111 1 1111234456666777777777777 88888766443
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-30 Score=269.50 Aligned_cols=211 Identities=17% Similarity=0.220 Sum_probs=156.2
Q ss_pred eEeecCCeeEEE---------------------------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeE
Q 041467 487 KIREGGFNIVYN---------------------------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKI 533 (746)
Q Consensus 487 ~ig~g~~g~v~~---------------------------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l 533 (746)
.||+|+||.||+ ||+|++.........++.+|+++++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 589999999994 67888765555555678899999999999999999
Q ss_pred EEEEecCCcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC----
Q 041467 534 ITICSSIDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV---- 603 (746)
Q Consensus 534 ~~~~~~~~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~---- 603 (746)
+++|.+....++||||+++|++. ...+++.++..++.||++|++|||+. +|+||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCcccC
Confidence 99999999999999999999885 34578999999999999999999999 999999999999997543
Q ss_pred ---cEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc--ccc---
Q 041467 604 ---VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQN--- 675 (746)
Q Consensus 604 ---~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~~--- 675 (746)
.+|++|||++...... ....++..|+|||.+.+... .+.++|||||||++|.... ...
T Consensus 159 ~~~~~kl~d~g~~~~~~~~------------~~~~~~~~~~aPe~~~~~~~--~~~~~Dv~slG~~l~el~~~g~~p~~~ 224 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSR------------EERVERIPWIAPECVPGGNS--LSTAADKWSFGTTLLEICFDGEVPLKE 224 (274)
T ss_pred ccceeeecCCccccccccc------------cccccCCcccCchhhcCCCC--CCcHHHHHHHHHHHHHHHhCCCCCccc
Confidence 4899999998643211 12357788999999876421 2446999999998873211 100
Q ss_pred ------cchhhccccCCCccHHHHHHhhCCCCCCCCC-CCCccchh
Q 041467 676 ------KSILKSAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 676 ------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
...+...........+.+..++..|+...|+ ||++.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il 270 (274)
T cd05076 225 RTPSEKERFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTIL 270 (274)
T ss_pred cChHHHHHHHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHH
Confidence 0111111111122234456666666666666 77776544
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-30 Score=272.85 Aligned_cols=230 Identities=20% Similarity=0.276 Sum_probs=174.9
Q ss_pred cCCCCCCeEeecCCeeEEE--------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
++|...+.||+|+||.||+ ||+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 4678899999999999995 67787765545556779999999999999999999999999999999
Q ss_pred hhhhccCCccc-----c-------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEE
Q 041467 546 DFKAISNGQLR-----L-------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV 607 (746)
Q Consensus 546 v~e~~~~g~l~-----~-------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki 607 (746)
+|||+++|++. . ..+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEe
Confidence 99999999874 1 2489999999999999999999999 9999999999999999999999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-ccc-----------
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQN----------- 675 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~~----------- 675 (746)
+|||+++........ .......++..|+|||++.+..++. ++|||||||++|.... ...
T Consensus 162 ~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~---~sDiwslG~il~~l~t~g~~p~~~~~~~~~~ 232 (288)
T cd05093 162 GDFGMSRDVYSTDYY------RVGGHTMLPIRWMPPESIMYRKFTT---ESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI 232 (288)
T ss_pred ccCCccccccCCcee------ecCCCCCccccccCHHHhccCCCCc---hhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 999999865332110 1111244578899999998776655 4999999999883221 110
Q ss_pred cchhhc-cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 676 KSILKS-AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 676 ~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
..+... ...........+..++..|+...|. ||++.++...++.+.
T Consensus 233 ~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 233 ECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred HHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 011111 1111123345566677777777777 888887776665544
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-30 Score=261.85 Aligned_cols=188 Identities=22% Similarity=0.302 Sum_probs=153.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-------hhhhHHHHHHHHHhhcCCCCceeeEEEEEec-CC
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-------KEASRSFAAEFNALRNIRHRNLIKIITICSS-ID 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-------~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~ 541 (746)
.++|-....+|+|||++||| ||||+-.... ....+...||.++.+.++||.||++|+||.- .+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 35677889999999999997 8999854321 2234567899999999999999999999975 45
Q ss_pred cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC---CCCcEEEcccccc
Q 041467 542 FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLA 613 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~---~~~~~ki~DfGla 613 (746)
.++-|+|||++.+|. ...+++.+++.|+.||+.||.||... .|+|||.||||.|||+- .-|.+||+|||++
T Consensus 542 sFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLS 620 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLS 620 (775)
T ss_pred cceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchh
Confidence 788999999999986 55689999999999999999999776 67899999999999984 3589999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccc-cccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN-LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~~~~DiwSlG~i~~ 668 (746)
+++.++...... ........+||.||.+||.+.-.+ ....+.++||||.|||||
T Consensus 621 KIMdddSy~~vd-GmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFy 675 (775)
T KOG1151|consen 621 KIMDDDSYNSVD-GMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFY 675 (775)
T ss_pred hhccCCccCccc-ceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhh
Confidence 998765443211 123344589999999999987443 333367799999999999
|
|
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-30 Score=266.77 Aligned_cols=227 Identities=15% Similarity=0.243 Sum_probs=171.4
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.++|+..+.||+|+||.||+ ||+|.+.... ...+.+.+|+.++++++||||+++++++.+.+..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 45788899999999999996 8899875432 23467899999999999999999999999999999999999
Q ss_pred cCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++|++. ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-- 158 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-- 158 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCce--
Confidence 999875 24578899999999999999999999 999999999999999999999999999987532211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeecccc-ccc-----------cchhhccc-cCCCccH
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQN-----------KSILKSAG-IKGKKTV 690 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~~-----------~~i~~~~~-~~~~~~~ 690 (746)
.......++..|+|||++.+..++. ++|||||||++|.... ... ..+..... .......
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (261)
T cd05072 159 -----TAREGAKFPIKWTAPEAINFGSFTI---KSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCP 230 (261)
T ss_pred -----eccCCCccceecCCHHHhccCCCCh---hhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence 1112234677899999998776654 4999999999983221 110 00110111 1112333
Q ss_pred HHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 691 SFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 691 ~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
..+..++.+|+...|+ ||+.+++..+++.
T Consensus 231 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 231 DELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 4566666666666677 8888877665543
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-30 Score=296.93 Aligned_cols=183 Identities=23% Similarity=0.262 Sum_probs=150.0
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||||++.... ....+++.+|++++++++|||||++++++.+.+..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 5789999999999999997 8999886432 233567999999999999999999999999999999999
Q ss_pred hhccCCcccc----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 548 KAISNGQLRL----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 548 e~~~~g~l~~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
||+++|++.. ...++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 9999998851 2345677899999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCC----------cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTT----------AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~----------~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+|+.......... ..........+||+.|||||++.+..++.+ +||||+||++|
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~k---SDIWSLGVILy 222 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASES---TDIYALGVILY 222 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcH---hHHHHHHHHHH
Confidence 9987622111000 000111223579999999999988877554 99999999998
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-31 Score=251.47 Aligned_cols=200 Identities=19% Similarity=0.271 Sum_probs=159.3
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----ccc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID-----FEG 544 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~-----~~~ 544 (746)
+.+..+.||.|+||.||. ||.|++... .-...+++.+|++++..++|.||+..++...-.. +.|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 445678999999999994 888887543 2345678999999999999999999988765543 578
Q ss_pred chhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 545 FDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 545 lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
+++|+|....-. .+.++.+.++-+++||++|++|||+. +|.||||||.|.|++.+...||||||+||.-..+.
T Consensus 134 V~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 134 VLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchhh
Confidence 899998643222 56789999999999999999999999 99999999999999999999999999998753322
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee-----------ccccccccchhhccccCCCcc
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA-----------LNEKKQNKSILKSAGIKGKKT 689 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~-----------~~~~~~~~~i~~~~~~~~~~~ 689 (746)
. ..++..+-|.+|+|||+++|... |+.++||||.||||+ ....+|...|.+..++|+.+.
T Consensus 211 ~-------~hMTqEVVTQYYRAPEiLMGaRh--Ys~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~Ea 281 (449)
T KOG0664|consen 211 R-------LNMTHEVVTQYYRAPELLMGARR--YTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEA 281 (449)
T ss_pred h-------hhhHHHHHHHHhccHHHhhcchh--hcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHH
Confidence 2 22344567899999999998754 344699999999998 445566667777888887555
Q ss_pred HHH
Q 041467 690 VSF 692 (746)
Q Consensus 690 ~~~ 692 (746)
...
T Consensus 282 Mr~ 284 (449)
T KOG0664|consen 282 MKY 284 (449)
T ss_pred HHH
Confidence 443
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-30 Score=281.01 Aligned_cols=176 Identities=22% Similarity=0.253 Sum_probs=145.1
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----ccc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID-----FEG 544 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~-----~~~ 544 (746)
+|+..+.||+|+||.||+ ||||++... .....+++.+|+++++.++||||+++++++...+ ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999996 899987543 2234567889999999999999999999998776 689
Q ss_pred chhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 545 FDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 545 lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
+|+||+.++... ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|+......
T Consensus 81 lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 81 VVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred EEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 999999743222 45689999999999999999999999 99999999999999999999999999998653221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. .......||+.|+|||++.+... ++.++||||+||++|
T Consensus 158 ~-------~~~~~~~~~~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 196 (372)
T cd07853 158 S-------KHMTQEVVTQYYRAPEILMGSRH--YTSAVDIWSVGCIFA 196 (372)
T ss_pred c-------ccCCCCCcCCCcCCHHHHcCCCC--CCcHHHHHhHHHHHH
Confidence 1 11223568999999999987542 234599999999998
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-30 Score=281.19 Aligned_cols=177 Identities=19% Similarity=0.231 Sum_probs=147.8
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC----
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID---- 541 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~---- 541 (746)
...++|+..+.||+|+||.||+ ||||++... .....+.+.+|+.+++.++||||+++++++....
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 3467899999999999999996 899988643 2334567889999999999999999999876543
Q ss_pred --cccchhhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 542 --FEGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 542 --~~~lv~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
..++||||+.++... ...+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+|+...
T Consensus 101 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 101 FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred cCeEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 468999999765433 44678999999999999999999999 99999999999999999999999999998652
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. .......||..|+|||++.+..++.+ +|||||||++|
T Consensus 178 ~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~---~DiwSlG~il~ 216 (364)
T cd07875 178 TS---------FMMTPYVVTRYYRAPEVILGMGYKEN---VDIWSVGCIMG 216 (364)
T ss_pred CC---------CcccCCcccCCcCCHHHHhCCCCCch---hhHHhHHHHHH
Confidence 21 11233678999999999988777554 99999999998
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-30 Score=278.61 Aligned_cols=229 Identities=19% Similarity=0.211 Sum_probs=167.9
Q ss_pred hcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecC-C
Q 041467 479 TNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSSI-D 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~-~ 541 (746)
.++|++.+.||+|+||.||+ ||+|++.... ....+.+.+|+.+++++ +||||++++++|... .
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 45789999999999999994 7889876432 23345678899999999 799999999988764 4
Q ss_pred cccchhhhccCCccc-----------------------------------------------------------------
Q 041467 542 FEGFDFKAISNGQLR----------------------------------------------------------------- 556 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~----------------------------------------------------------------- 556 (746)
..+++|||+++|++.
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 678899999988774
Q ss_pred -ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccccccccccc
Q 041467 557 -LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGIN 635 (746)
Q Consensus 557 -~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~ 635 (746)
...+++..+..++.||+.|++|||+. +|+||||||+||++++++.+||+|||+++.+...... .......
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~------~~~~~~~ 236 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------VRKGDAR 236 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcch------hhccCCC
Confidence 02578999999999999999999999 9999999999999999999999999999876432211 1112245
Q ss_pred ccccccccccccccccccCCCccceeeccceeeccc--ccccc----------chhhc--cccCCCccHHHHHHhhCCCC
Q 041467 636 GTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQNK----------SILKS--AGIKGKKTVSFFLSLLSPSC 701 (746)
Q Consensus 636 gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~~~----------~i~~~--~~~~~~~~~~~~~~~~~~~~ 701 (746)
++..|||||++.+..++.+ +||||+||++|... ..... ..... .........+.+.+++..|+
T Consensus 237 ~~~~y~aPE~~~~~~~~~~---~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl 313 (337)
T cd05054 237 LPLKWMAPESIFDKVYTTQ---SDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCW 313 (337)
T ss_pred CCccccCcHHhcCCCCCcc---ccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHc
Confidence 6778999999988877655 99999999998321 11100 00000 00111223344555566666
Q ss_pred CCCCC-CCCccchhhhccc
Q 041467 702 SVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 702 ~~~p~-~p~~~~~~~~~~~ 719 (746)
...|+ ||+..++...+.+
T Consensus 314 ~~~p~~RPs~~ell~~l~~ 332 (337)
T cd05054 314 HNNPEDRPTFSELVEILGD 332 (337)
T ss_pred cCChhhCcCHHHHHHHHHH
Confidence 66666 8887776655544
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-30 Score=268.42 Aligned_cols=231 Identities=16% Similarity=0.217 Sum_probs=169.6
Q ss_pred cCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
++|+..+.||+|+||.||+ ||+|.+.... ....+++..|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 5678889999999999996 5677764332 2334678889999999999999999998764 45778
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
++||+++|++. ...+++..+..++.||+.|++|||+. +++||||||+||++++++.+|++|||+++.....
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 99999999986 34679999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc----------ccchhhccc--cCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ----------NKSILKSAG--IKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~----------~~~i~~~~~--~~~ 686 (746)
... .......|+..|+|||++.+..++. ++|||||||++|.... .. ...+..... ...
T Consensus 163 ~~~------~~~~~~~~~~~y~~pE~~~~~~~~~---~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 233 (279)
T cd05111 163 DKK------YFYSEHKTPIKWMALESILFGRYTH---QSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQP 233 (279)
T ss_pred Ccc------cccCCCCCcccccCHHHhccCCcCc---hhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCC
Confidence 211 1122355778999999998777655 4999999999882211 10 011111111 111
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPSR 723 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~~ 723 (746)
..+...+..++..|+...|. ||++.+....+.++...
T Consensus 234 ~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 234 QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 12233455566667777777 88888776655554443
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-30 Score=268.88 Aligned_cols=227 Identities=20% Similarity=0.277 Sum_probs=175.4
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||||++... .......+.+|+++++.++||||+++++++.+.+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 5789999999999999996 899976532 2334557889999999999999999999999999999999
Q ss_pred hhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 548 KAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 548 e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
||+++|++. ...+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999885 23478899999999999999999999 999999999999999999999999999887532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc---------ccchhh---ccc---
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ---------NKSILK---SAG--- 683 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~---------~~~i~~---~~~--- 683 (746)
... ......|+..|+|||.+.+..++. ++||||+||++|...... ...+.. ...
T Consensus 159 ~~~--------~~~~~~~~~~~~aPE~~~~~~~~~---~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 227 (267)
T cd08228 159 KTT--------AAHSLVGTPYYMSPERIHENGYNF---KSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPP 227 (267)
T ss_pred hhH--------HHhcCCCCccccChhhhccCCCCc---hhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCC
Confidence 211 112356889999999998776654 499999999988221110 001111 111
Q ss_pred cCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 684 IKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
.+.......+..++..|+...|+ ||+..++.....++
T Consensus 228 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 228 LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 11123345677788888888887 99998877665543
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-30 Score=265.70 Aligned_cols=222 Identities=20% Similarity=0.263 Sum_probs=166.8
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
++|+..+.||+|+||.||+ ||+|.+... ......+.+|++++++++||||+++++++...+..+++|||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 4577889999999999995 888877533 2234568899999999999999999999999999999999999
Q ss_pred CCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 552 NGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 552 ~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
+|++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|||.++.......
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~---- 155 (256)
T cd05114 83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY---- 155 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce----
Confidence 99886 23578999999999999999999999 999999999999999999999999999976532111
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-----------ccchhhc-cccCCCccHHH
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-----------NKSILKS-AGIKGKKTVSF 692 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-----------~~~i~~~-~~~~~~~~~~~ 692 (746)
.......++..|+|||++.+..++. ++|||||||++|.... .. ...+... ...........
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 229 (256)
T cd05114 156 ---TSSSGAKFPVKWSPPEVFNFSKYSS---KSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMT 229 (256)
T ss_pred ---eccCCCCCchhhCChhhcccCccch---hhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH
Confidence 1112234567899999998776655 4999999999983211 10 0011100 01111223345
Q ss_pred HHHhhCCCCCCCCC-CCCccchhh
Q 041467 693 FLSLLSPSCSVFPL-TPSSNSFTL 715 (746)
Q Consensus 693 ~~~~~~~~~~~~p~-~p~~~~~~~ 715 (746)
+..++..|+...|+ ||++.+...
T Consensus 230 ~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 230 VYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred HHHHHHHHccCCcccCcCHHHHHH
Confidence 66666667777776 887776543
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-30 Score=291.78 Aligned_cols=190 Identities=22% Similarity=0.309 Sum_probs=144.5
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC----
Q 041467 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID---- 541 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~---- 541 (746)
++...+|+..+.+|+||||.||+ ||||++.... ........||++++++++|||||+++..|.+..
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 56778899999999999999998 8999997653 334556889999999999999999986543311
Q ss_pred --------------------------------------------------------------------------------
Q 041467 542 -------------------------------------------------------------------------------- 541 (746)
Q Consensus 542 -------------------------------------------------------------------------------- 541 (746)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -----------------------------------cccchhhhccCCccc----ccCC--CHHHHHHHHHHHHHHHHHHH
Q 041467 542 -----------------------------------FEGFDFKAISNGQLR----LCNL--SLTQRVNIAIDVAFAIEYLR 580 (746)
Q Consensus 542 -----------------------------------~~~lv~e~~~~g~l~----~~~l--~~~~~~~i~~~i~~~l~yLH 580 (746)
..|+-||||+...++ ...+ ......++++||++||+|+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 013344555444433 1122 35678899999999999999
Q ss_pred hcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC-------CC---CCCCcccccccccccccccccccccccccc
Q 041467 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG-------YE---PGTTAETASSSIGINGTVGYVAPVIIAARN 650 (746)
Q Consensus 581 ~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~-------~~---~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 650 (746)
++ +||||||||.||++|++..|||+|||+|..... .. ...........++.+||.-|+|||++.+..
T Consensus 715 ~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 99 999999999999999999999999999987320 00 001111222456789999999999998776
Q ss_pred cccCCCccceeeccceee
Q 041467 651 LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 651 ~~~~~~~~DiwSlG~i~~ 668 (746)
...|+.|+||||+|+||+
T Consensus 792 ~~~Yn~KiDmYSLGIVlF 809 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLF 809 (1351)
T ss_pred cccccchhhhHHHHHHHH
Confidence 334566799999999998
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-31 Score=254.15 Aligned_cols=177 Identities=23% Similarity=0.248 Sum_probs=156.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
.+++|...+++|+|.||+|.. +|||++++.- +.....-..|-++++..+||.+..+.-.|+..+..++
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 457889999999999999984 8999987652 3334456789999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||..+|.|. .+.++++..+.+..+|+.||.|||++ +||.||+|.+|.|+|.+|++||+|||+++.--.
T Consensus 246 VMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~-- 320 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK-- 320 (516)
T ss_pred EEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhccc--
Confidence 99999999986 56789999999999999999999999 999999999999999999999999999986321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......++|||+.|.|||++....|+.. +|+|.+|||||
T Consensus 321 ------~g~t~kTFCGTPEYLAPEVleDnDYgra---VDWWG~GVVMY 359 (516)
T KOG0690|consen 321 ------YGDTTKTFCGTPEYLAPEVLEDNDYGRA---VDWWGVGVVMY 359 (516)
T ss_pred ------ccceeccccCChhhcCchhhccccccce---eehhhhhHHHH
Confidence 2234556999999999999999988765 99999999999
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-30 Score=278.72 Aligned_cols=174 Identities=26% Similarity=0.390 Sum_probs=147.6
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC------cc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID------FE 543 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------~~ 543 (746)
..+...+.+|+|+||.||+ ||||.++... ....++.-+|+++|++++|||||+++++-.+.. ..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 4456678999999999997 9999997643 445667889999999999999999998765533 46
Q ss_pred cchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC--CCC--cEEEcccc
Q 041467 544 GFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD--QDV--VTHVGDLG 611 (746)
Q Consensus 544 ~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~--~~~--~~ki~DfG 611 (746)
.++||||.+|+|+ ...+++.+.+.++.+++.|+.|||++ +||||||||.||++- ++| .-||+|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 7899999999997 45799999999999999999999999 999999999999983 334 47999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
.||.+.+. +...+.+||..|.|||++.. +.|+.. +|.|||||++|
T Consensus 170 ~Arel~d~---------s~~~S~vGT~~YLhPel~E~q~~y~~t---VDLWS~GvtlY 215 (732)
T KOG4250|consen 170 AARELDDN---------SLFTSLVGTEEYLHPELYERQKKYTAT---VDLWSFGVTLY 215 (732)
T ss_pred ccccCCCC---------CeeeeecCchhhcChHHHhhccCcCce---eehhhhhhHHH
Confidence 99987443 34456899999999999995 556555 99999999999
|
|
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-30 Score=269.49 Aligned_cols=178 Identities=22% Similarity=0.314 Sum_probs=148.0
Q ss_pred hcCCCCCCeEeecCCeeEEE-----------------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEE
Q 041467 479 TNNFSPANKIREGGFNIVYN-----------------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKII 534 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-----------------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~ 534 (746)
..+|+..+.||+|+||.||+ ||+|++.... ......+.+|++++++++||||++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 35788999999999999994 7899886432 33445799999999999999999999
Q ss_pred EEEecCCcccchhhhccCCcccc-----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCe
Q 041467 535 TICSSIDFEGFDFKAISNGQLRL-----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597 (746)
Q Consensus 535 ~~~~~~~~~~lv~e~~~~g~l~~-----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NI 597 (746)
+++...+..++||||++++++.. ..+++.++..++.|++.|++|||+. +++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 99999999999999999998751 1368889999999999999999999 999999999999
Q ss_pred eeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 598 LLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 598 Ll~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++++++.+|++|||+++....... ........++..|+|||++.+..++. ++|||||||++|
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwSlG~~l~ 222 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDY------YRIQGRAVLPIRWMAWESILLGKFTT---ASDVWAFGVTLW 222 (295)
T ss_pred EEcCCCcEEecccccccccccCcc------eeccCcCcCceeecChhhhccCCcCc---hhhHHHHHHHHH
Confidence 999999999999999976532211 01112234577899999998777655 499999999988
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-30 Score=265.31 Aligned_cols=228 Identities=20% Similarity=0.209 Sum_probs=169.9
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 35788999999999999996 6888876432 3345678999999999999999999999999999999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+|||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+|++|||+++.....
T Consensus 83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999886 23689999999999999999999998 9999999999999999999999999999876421
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--cccc------cc----hhhc-cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQN------KS----ILKS-AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~~------~~----i~~~-~~~~~ 686 (746)
... .......++..|+|||.+.+..++.+ +|||||||++|... .... .. +... .....
T Consensus 160 ~~~------~~~~~~~~~~~y~~Pe~~~~~~~~~~---~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 230 (266)
T cd05033 160 EAT------YTTKGGKIPIRWTAPEAIAYRKFTSA---SDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPP 230 (266)
T ss_pred ccc------eeccCCCCCccccChhhhccCCCccc---cchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 111 11112345678999999987776554 99999999988321 1100 00 1100 11111
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
....+.+..++..|+...|+ ||++.++...++
T Consensus 231 ~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~ 263 (266)
T cd05033 231 MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLD 263 (266)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 22334555666666666666 777776654443
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-30 Score=268.02 Aligned_cols=172 Identities=23% Similarity=0.283 Sum_probs=146.5
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
|+..+.||+|+||+||+ ||+|++.... ......+.+|++++++++||||+++.+++...+..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 56678999999999997 8999876432 22344578899999999999999999999999999999999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--- 155 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG--- 155 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCC---
Confidence 9999885 23589999999999999999999999 9999999999999999999999999999764221
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......|+..|+|||++.+..++. ++||||+||++|
T Consensus 156 ------~~~~~~~g~~~~~aPE~~~~~~~~~---~~Di~slG~~l~ 192 (285)
T cd05632 156 ------ESIRGRVGTVGYMAPEVLNNQRYTL---SPDYWGLGCLIY 192 (285)
T ss_pred ------CcccCCCCCcCccChHHhcCCCCCc---ccchHHHHHHHH
Confidence 1112357899999999998776655 499999999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-30 Score=268.66 Aligned_cols=178 Identities=21% Similarity=0.308 Sum_probs=150.0
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceee
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIK 532 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~ 532 (746)
..+|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 46789999999999999995 6888876442 344567899999999999999999
Q ss_pred EEEEEecCCcccchhhhccCCccc-----cc-----------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCC
Q 041467 533 IITICSSIDFEGFDFKAISNGQLR-----LC-----------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSN 596 (746)
Q Consensus 533 l~~~~~~~~~~~lv~e~~~~g~l~-----~~-----------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~N 596 (746)
+++++...+..+++||+++++++. .. .+++..+..++.|++.|++|||+. +|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 999999999999999999998875 11 589999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 597 ILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 597 ILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+++.++.+|++|||+++........ .......++..|||||++.+..++. ++|||||||++|
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slG~~l~ 223 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYY------RVQGRAPLPIRWMAWESVLLGKFTT---KSDVWAFGVTLW 223 (296)
T ss_pred eeecCCCceEEccccceeecccCcce------eecCcCCCCceecCHHHhhcCCCCc---cchhhhhHHHHH
Confidence 99999999999999999865332211 1112345678899999998766654 499999999988
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-30 Score=265.70 Aligned_cols=166 Identities=22% Similarity=0.284 Sum_probs=140.6
Q ss_pred EeecCCeeEEE---------EEeehhhhhhh---hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCcc
Q 041467 488 IREGGFNIVYN---------VAMKVANLKQK---EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL 555 (746)
Q Consensus 488 ig~g~~g~v~~---------vavK~~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l 555 (746)
||+|+||.||+ ||+|++..... ...+.+..|++++++++||||+++++++......++||||+++|++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 68999999996 89998764321 2234566799999999999999999999999999999999999988
Q ss_pred c-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccc
Q 041467 556 R-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628 (746)
Q Consensus 556 ~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~ 628 (746)
. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-------- 149 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-------- 149 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--------
Confidence 5 23578899999999999999999999 99999999999999999999999999987653211
Q ss_pred cccccccccccccccccccccccccCCCccceeeccceee
Q 041467 629 SSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 629 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||..|+|||++.+..++. ++||||+||++|
T Consensus 150 -~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwslGv~l~ 185 (277)
T cd05607 150 -TITQRAGTNGYMAPEILKEEPYSY---PVDWFAMGCSIY 185 (277)
T ss_pred -eeeccCCCCCccCHHHHccCCCCC---chhHHHHHHHHH
Confidence 112356899999999998877654 499999999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-30 Score=264.94 Aligned_cols=224 Identities=21% Similarity=0.307 Sum_probs=163.7
Q ss_pred CCCCCeEeecCCeeEEE------------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc-----
Q 041467 482 FSPANKIREGGFNIVYN------------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDF----- 542 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~------------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~----- 542 (746)
|...+.||+|+||.||+ ||||+++... ......+.+|+++++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56788999999999995 8899876432 3345678999999999999999999999876554
Q ss_pred -ccchhhhccCCccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccc
Q 041467 543 -EGFDFKAISNGQLR-----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610 (746)
Q Consensus 543 -~~lv~e~~~~g~l~-----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~Df 610 (746)
.++++||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 78999999999874 13578999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchhh--
Q 041467 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSILK-- 680 (746)
Q Consensus 611 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~~-- 680 (746)
|+++.+....... ......++..|+|||++.+..++. ++|||||||++|.... .. ..++++
T Consensus 158 g~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~---~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~ 228 (273)
T cd05035 158 GLSKKIYSGDYYR------QGRIAKMPVKWIAIESLADRVYTS---KSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYL 228 (273)
T ss_pred cceeecccccccc------ccccccCCccccCHhhcccCCCCc---ccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 9998764322110 011133467899999987776655 4999999999983211 10 001111
Q ss_pred ---ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 681 ---SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 681 ---~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
..........+.+..++.+|+...|+ ||++.++...+
T Consensus 229 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l 269 (273)
T cd05035 229 RHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVL 269 (273)
T ss_pred HcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 01111123334555555556666666 77777655443
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-30 Score=268.93 Aligned_cols=229 Identities=20% Similarity=0.270 Sum_probs=172.8
Q ss_pred cCCCCCCeEeecCCeeEEE--------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
++|...+.||+|+||.||+ ||+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 4577889999999999995 66777765544555679999999999999999999999999999999
Q ss_pred hhhhccCCcccc---------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 546 DFKAISNGQLRL---------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 546 v~e~~~~g~l~~---------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
||||+++|++.. ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999998751 2378999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cccc-------
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQNK------- 676 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~~~------- 676 (746)
+||+|||+++....... ........|+..|+|||++.+..++.+ +|||||||++|.... ....
T Consensus 162 ~~l~dfg~a~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~el~t~g~~p~~~~~~~ 232 (291)
T cd05094 162 VKIGDFGMSRDVYSTDY------YRVGGHTMLPIRWMPPESIMYRKFTTE---SDVWSFGVILWEIFTYGKQPWFQLSNT 232 (291)
T ss_pred EEECCCCcccccCCCce------eecCCCCCcceeecChHHhccCCCCch---hhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999976533211 011123456889999999988776554 999999999883221 1110
Q ss_pred chh----h-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 677 SIL----K-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 677 ~i~----~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
.+. . ............+..++..|+...|. ||++.++...+..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~ 282 (291)
T cd05094 233 EVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282 (291)
T ss_pred HHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 000 0 01111122334566666667777777 88888776655544
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-30 Score=268.58 Aligned_cols=178 Identities=26% Similarity=0.411 Sum_probs=149.1
Q ss_pred hcCCCCCCeEeecCCeeEEE--------------EEeehhhhhhhh-hhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKE-ASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.++|...+.||+|+||.||+ ||||++...... ..+.+.+|++++++++||||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 35688889999999999995 689987654333 456899999999999999999999999999999
Q ss_pred cchhhhccCCccc-------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 544 GFDFKAISNGQLR-------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 544 ~lv~e~~~~g~l~-------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
+++|||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCe
Confidence 9999999999875 12468889999999999999999999 9999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+|++|||+++.+...... .......++..|+|||++.+..++.+ +||||+||++|
T Consensus 161 ~kl~d~g~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 215 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYY------RVGGHTMLPIRWMPPESIMYRKFTTE---SDVWSFGVVLW 215 (280)
T ss_pred EEECCcccceecccCcce------ecCCCCcccceecChhhhccCCcchh---hhHHHHHHHHH
Confidence 999999999765322110 11112446788999999988776554 99999999988
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-30 Score=265.83 Aligned_cols=212 Identities=16% Similarity=0.219 Sum_probs=156.7
Q ss_pred CeEeecCCeeEEE----------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 486 NKIREGGFNIVYN----------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 486 ~~ig~g~~g~v~~----------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+.||+|+||.||+ ||+|.+........+.+.+|+.+++.++|||||++++++...+..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 4689999999997 445555444444456788999999999999999999999998999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc--------EEEcccccccc
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV--------THVGDLGLAKF 615 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~--------~ki~DfGla~~ 615 (746)
+++|++. ...+++..+..++.||+.|++|||+. +|+||||||+||+++.++. +|++|||++..
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 9999885 23579999999999999999999999 9999999999999987665 69999999865
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc--c---------cchhhcccc
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ--N---------KSILKSAGI 684 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~--~---------~~i~~~~~~ 684 (746)
... .....|+..|+|||++.+... ++.++||||+||++|...... . .........
T Consensus 158 ~~~------------~~~~~~~~~y~aPE~~~~~~~--~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 223 (258)
T cd05078 158 VLP------------KEILLERIPWVPPECIENPQN--LSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDRHQ 223 (258)
T ss_pred cCC------------chhccccCCccCchhccCCCC--CCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHcccc
Confidence 421 112567889999999986432 233599999999998221110 0 001111111
Q ss_pred CCCccHHHHHHhhCCCCCCCCC-CCCccchh
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
.....+..+..++..|+...|+ ||+..+..
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 254 (258)
T cd05078 224 LPAPKWTELANLINQCMDYEPDFRPSFRAII 254 (258)
T ss_pred CCCCCcHHHHHHHHHHhccChhhCCCHHHHH
Confidence 2223334555666666666666 77777554
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-30 Score=265.05 Aligned_cols=224 Identities=19% Similarity=0.268 Sum_probs=168.3
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.+|+..+.||+|+||.||+ ||+|++... ....+.+.+|++++++++||||+++++++...+..+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 4577888999999999996 888887643 233567899999999999999999999999999999999999
Q ss_pred cCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-- 159 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-- 159 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccccee--
Confidence 999885 23578999999999999999999999 999999999999999999999999999987533211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c----------cchhhc-cccCCCccH
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N----------KSILKS-AGIKGKKTV 690 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~----------~~i~~~-~~~~~~~~~ 690 (746)
.......++..|+|||++.+..++.. +|||||||++|.... .. . ..+... .+.......
T Consensus 160 -----~~~~~~~~~~~y~aPE~~~~~~~~~~---~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (263)
T cd05052 160 -----TAHAGAKFPIKWTAPESLAYNKFSIK---SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCP 231 (263)
T ss_pred -----eccCCCCCccccCCHHHhccCCCCch---hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Confidence 01111234668999999988776554 999999999983221 11 0 001100 111112334
Q ss_pred HHHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 691 SFFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 691 ~~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
+.+..++.+|+...|+ ||++.+....+
T Consensus 232 ~~~~~li~~cl~~~p~~Rp~~~~l~~~l 259 (263)
T cd05052 232 PKVYELMRACWQWNPSDRPSFAEIHQAF 259 (263)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHHHHH
Confidence 5566666666666666 78877665443
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-30 Score=263.58 Aligned_cols=176 Identities=22% Similarity=0.344 Sum_probs=147.6
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
++|+..+.||+|+||.||. ||||.+.... .....+.+|+.++++++||||+++++++...+..+++|||+.
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4678889999999999996 8999876432 234568999999999999999999999999889999999999
Q ss_pred CCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 552 NGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 552 ~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
+|++. ...+++.++..++.||+.|++|||+. +|+||||||+||++++++.+||+|||.++.......
T Consensus 83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~---- 155 (256)
T cd05113 83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY---- 155 (256)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce----
Confidence 99875 23689999999999999999999999 999999999999999999999999999886532211
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceeec
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFAL 669 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~ 669 (746)
.......++..|+|||++.+..++. ++|||||||++|.
T Consensus 156 ---~~~~~~~~~~~y~~pe~~~~~~~~~---~~Di~slG~~l~~ 193 (256)
T cd05113 156 ---TSSVGSKFPVRWSPPEVLLYSKFSS---KSDVWAFGVLMWE 193 (256)
T ss_pred ---eecCCCccChhhCCHHHHhcCcccc---hhHHHHHHHHHHH
Confidence 1112234667899999998776654 4999999999983
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-30 Score=268.47 Aligned_cols=178 Identities=20% Similarity=0.243 Sum_probs=150.9
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
+.|+..+.||+|+||.||+ ||+|++........+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 5688999999999999996 8899887665566778999999999999999999999999999999999999
Q ss_pred cCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 551 SNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 551 ~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---- 164 (292)
T cd06644 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL---- 164 (292)
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccc----
Confidence 999875 34689999999999999999999998 99999999999999999999999999987542211
Q ss_pred cccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
.......|+..|+|||++.+.. ...++.++|||||||++|
T Consensus 165 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~ 206 (292)
T cd06644 165 ----QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLI 206 (292)
T ss_pred ----cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHH
Confidence 1112356889999999986432 122355699999999998
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-30 Score=266.70 Aligned_cols=225 Identities=19% Similarity=0.255 Sum_probs=168.7
Q ss_pred cCCCCCCeEeecCCeeEEE--------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
.+|...+.||+|+||.||+ ||+|.+........+.+.+|+++++.++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 4677889999999999995 57777765555556789999999999999999999999999999999
Q ss_pred hhhhccCCccc-----c---------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcE
Q 041467 546 DFKAISNGQLR-----L---------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605 (746)
Q Consensus 546 v~e~~~~g~l~-----~---------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 605 (746)
+|||+++|++. . ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 99999998875 1 2478999999999999999999999 99999999999999999999
Q ss_pred EEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-ccc-------cc
Q 041467 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQN-------KS 677 (746)
Q Consensus 606 ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~~-------~~ 677 (746)
||+|||+++........ .......+++.|+|||++.+..++.+ +|||||||++|.... ... ..
T Consensus 162 kL~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~el~~~g~~p~~~~~~~~ 232 (280)
T cd05092 162 KIGDFGMSRDIYSTDYY------RVGGRTMLPIRWMPPESILYRKFTTE---SDIWSFGVVLWEIFTYGKQPWYQLSNTE 232 (280)
T ss_pred EECCCCceeEcCCCcee------ecCCCccccccccCHHHhccCCcCch---hhHHHHHHHHHHHHcCCCCCCccCCHHH
Confidence 99999999765322110 11112345788999999988776554 999999999883211 110 00
Q ss_pred ----hhhc-cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhh
Q 041467 678 ----ILKS-AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLL 716 (746)
Q Consensus 678 ----i~~~-~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~ 716 (746)
+... .........+.+.+++..|+...|. ||+..++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~ 277 (280)
T cd05092 233 AIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSR 277 (280)
T ss_pred HHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 0000 1111123345556666666666666 7777765543
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=266.95 Aligned_cols=178 Identities=21% Similarity=0.311 Sum_probs=147.3
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceee
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIK 532 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~ 532 (746)
.++|+..+.||+|+||.||+ ||+|++.... ......+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 35689999999999999994 6888876432 334567999999999999999999
Q ss_pred EEEEEecCCcccchhhhccCCccc----c------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCC
Q 041467 533 IITICSSIDFEGFDFKAISNGQLR----L------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSN 596 (746)
Q Consensus 533 l~~~~~~~~~~~lv~e~~~~g~l~----~------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~N 596 (746)
+++++...+..+++|||+++|++. . ..+++.++..++.|++.|++|||+. +|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 999999999999999999998885 0 2367788999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 597 ILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 597 ILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|++++++.+|++|||+++.+...... .......++..|+|||+..+..++. ++|||||||++|
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~---~~DiwSlG~~l~ 223 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYY------RIQGRAVLPIRWMSWESILLGKFTT---ASDVWAFGVTLW 223 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcce------eccCcCcCccccCCHHHHhcCCccc---hhhhhHHHHHHH
Confidence 99999999999999999865322110 0111233467899999988776654 599999999988
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-30 Score=269.30 Aligned_cols=225 Identities=18% Similarity=0.237 Sum_probs=166.5
Q ss_pred cCCCCCCeEeecCCeeEEE--------------EEeehhhhhhh-hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 480 NNFSPANKIREGGFNIVYN--------------VAMKVANLKQK-EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
.+|...+.||+|+||.||+ ||||++..... ...+.+.+|+.++++++|||||++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 3467788999999999996 78998864432 23456889999999999999999999999999999
Q ss_pred chhhhccCCccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC
Q 041467 545 FDFKAISNGQLR---------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603 (746)
Q Consensus 545 lv~e~~~~g~l~---------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~ 603 (746)
+++||+.++++. ...+++..+..++.|++.|++|+|+. +|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCC
Confidence 999999887764 12478888999999999999999999 999999999999999999
Q ss_pred cEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------c
Q 041467 604 VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------N 675 (746)
Q Consensus 604 ~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~ 675 (746)
.+||+|||+++....... ........+++.|+|||++.+..++. ++||||+||++|.... .. .
T Consensus 162 ~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slG~~l~el~~~g~~p~~~~~~ 232 (283)
T cd05091 162 NVKISDLGLFREVYAADY------YKLMGNSLLPIRWMSPEAIMYGKFSI---DSDIWSYGVVLWEVFSYGLQPYCGYSN 232 (283)
T ss_pred ceEecccccccccccchh------eeeccCccCCccccCHHHHhcCCCCc---chhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999999999986532211 11112244678999999998776654 4999999999983211 10 0
Q ss_pred cchhh----c-cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhh
Q 041467 676 KSILK----S-AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLL 716 (746)
Q Consensus 676 ~~i~~----~-~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~ 716 (746)
..+.. . ...........+..++..|+...|. ||++.++...
T Consensus 233 ~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 233 QDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 01111 1 1111233445556666666666666 8877765543
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=262.74 Aligned_cols=174 Identities=21% Similarity=0.307 Sum_probs=139.2
Q ss_pred CeEeecCCeeEEE-----------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCC
Q 041467 486 NKIREGGFNIVYN-----------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG 553 (746)
Q Consensus 486 ~~ig~g~~g~v~~-----------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g 553 (746)
+.||+|+||.||+ +|+|.+.... ......+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 3689999999996 6788775432 233457889999999999999999999999999999999999999
Q ss_pred ccc----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 554 QLR----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 554 ~l~----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++. ....++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-- 155 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY-- 155 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcce--
Confidence 885 11356778889999999999999999 999999999999999999999999999875422111
Q ss_pred Cccccccccccccccccccccccccccc----ccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNL----ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~----~~~~~~~DiwSlG~i~~ 668 (746)
........|+..|+|||++.+... ...+.++|||||||++|
T Consensus 156 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~ 200 (269)
T cd05087 156 ----YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIW 200 (269)
T ss_pred ----eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHH
Confidence 011123457889999999874321 12355799999999988
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-30 Score=264.59 Aligned_cols=179 Identities=20% Similarity=0.256 Sum_probs=150.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|+..+.||+|+||.||+ ||+|+++.........+.+|+.+++.++||||+++++++...+..+++|||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 34678889999999999996 899988655444455688999999999999999999999999999999999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---- 160 (267)
T cd06645 88 CGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATI---- 160 (267)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcc----
Confidence 9999986 45689999999999999999999999 99999999999999999999999999987653211
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......|+..|+|||++.......++.++||||+||++|
T Consensus 161 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~ 200 (267)
T cd06645 161 ----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAI 200 (267)
T ss_pred ----cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHH
Confidence 1122357899999999985332222345699999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-30 Score=267.39 Aligned_cols=224 Identities=19% Similarity=0.260 Sum_probs=166.6
Q ss_pred cCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
.+|+..+.||+|+||.||+ ||+|.+.... ......+.+|++++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4678889999999999996 6778775332 3334678999999999999999999999999999999
Q ss_pred hhhhccCCcccc----------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC
Q 041467 546 DFKAISNGQLRL----------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603 (746)
Q Consensus 546 v~e~~~~g~l~~----------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~ 603 (746)
+|||+++|++.. ..+++.++..++.|++.|++|||+. +|+||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 999999888741 2468889999999999999999999 999999999999999999
Q ss_pred cEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c------
Q 041467 604 VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N------ 675 (746)
Q Consensus 604 ~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~------ 675 (746)
.+|++|||+++........ .......++..|+|||++.+..++. ++|||||||++|.... .. .
T Consensus 162 ~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05090 162 HVKISDLGLSREIYSADYY------RVQPKSLLPIRWMPPEAIMYGKFSS---DSDIWSFGVVLWEIFSFGLQPYYGFSN 232 (283)
T ss_pred cEEeccccccccccCCcce------ecccCCCccceecChHHhccCCCCc---hhhhHHHHHHHHHHHcCCCCCCCCCCH
Confidence 9999999999875332211 1112244577899999998776654 5999999999883221 10 0
Q ss_pred cchhh---ccc--cCCCccHHHHHHhhCCCCCCCCC-CCCccchhh
Q 041467 676 KSILK---SAG--IKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTL 715 (746)
Q Consensus 676 ~~i~~---~~~--~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~ 715 (746)
..+.. ... .......+.+..++..|+...|+ ||+..++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 278 (283)
T cd05090 233 QEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHT 278 (283)
T ss_pred HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 01111 101 11123345566666666666666 777765543
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-30 Score=274.63 Aligned_cols=175 Identities=21% Similarity=0.273 Sum_probs=144.6
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC-----
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI----- 540 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~----- 540 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 4567899999999999999996 8999886432 23345678999999999999999999987643
Q ss_pred -CcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 541 -DFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 541 -~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
...+++++++ ++++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 167 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQ 167 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCcccee
Confidence 2457888877 55554 45689999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ......||+.|+|||++.+... ++.++||||+||++|
T Consensus 168 ~~~-----------~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 207 (343)
T cd07878 168 ADD-----------EMTGYVATRWYRAPEIMLNWMH--YNQTVDIWSVGCIMA 207 (343)
T ss_pred cCC-----------CcCCccccccccCchHhcCCcc--CCchhhhHhHHHHHH
Confidence 522 1234678999999999976422 234699999999998
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-30 Score=267.90 Aligned_cols=229 Identities=19% Similarity=0.224 Sum_probs=169.2
Q ss_pred CCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 481 NFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
+|+..+.||+|+||.||+ ||+|.+.... ....+.+.+|+.+++.++||||+++++.|...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 477889999999999996 6777765332 2335678999999999999999999999999999999
Q ss_pred hhhhccCCcccc-----------------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCC
Q 041467 546 DFKAISNGQLRL-----------------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSN 596 (746)
Q Consensus 546 v~e~~~~g~l~~-----------------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~N 596 (746)
++||+.+|++.. ..+++.++..++.|++.|++|||+. +|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 999999888751 2477889999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-
Q 041467 597 ILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ- 674 (746)
Q Consensus 597 ILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~- 674 (746)
|++++++.+||+|||+++........ .......++..|+|||++.+..++. ++|||||||++|.... ..
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~---~~Di~slG~~l~el~t~g~~ 228 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSY------VKRSKGRIPVKWMAIESLFDHIYTT---QSDVWSFGVLLWEIVTLGGN 228 (290)
T ss_pred EEEcCCCcEEeccccccccccCccch------hcccCCCCCccccCHHHHccCCcch---HhHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999865332211 1112234567899999988776655 4999999999883221 10
Q ss_pred ------ccchhhc-----cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 675 ------NKSILKS-----AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 675 ------~~~i~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
...++.. ...........+..++..|+...|+ ||++.++...++.+.
T Consensus 229 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 229 PYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred CCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 0111111 1111223334555556666666666 888887766555543
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-30 Score=265.75 Aligned_cols=178 Identities=24% Similarity=0.310 Sum_probs=146.3
Q ss_pred cCCCCCCeEeecCCeeEEE-------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Cccc
Q 041467 480 NNFSPANKIREGGFNIVYN-------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFEG 544 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~~ 544 (746)
.+|+..+.||+|+||.||+ ||+|++........+.+.+|++++++++||||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4678899999999999985 788987655555567899999999999999999999987653 3678
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+||||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 999999999986 23579999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .......++..|+|||++.+..++. ++|||||||++|
T Consensus 161 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~~l~ 202 (284)
T cd05081 161 DKEYY-----KVREPGESPIFWYAPESLTESKFSV---ASDVWSFGVVLY 202 (284)
T ss_pred CCcce-----eecCCCCCceEeeCHHHhccCCcCh---HHHHHHHHHHHH
Confidence 22110 0011123445699999998776654 599999999988
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-30 Score=265.03 Aligned_cols=227 Identities=22% Similarity=0.287 Sum_probs=172.7
Q ss_pred hhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 477 KATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
+...+|+..+.||.|+||.||+ ||+|++..........+.+|+++++.++||||+++++++.+.+..+++||
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 3456789999999999999996 89999876655556679999999999999999999999999999999999
Q ss_pred hccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 549 AISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 549 ~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 99999885 23579999999999999999999999 999999999999999999999999999977532211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchhh----c-cccCCCc
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSILK----S-AGIKGKK 688 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~~----~-~~~~~~~ 688 (746)
......++..|+|||++.+..++. ++|||||||++|.... .. ..+++. . .......
T Consensus 160 --------~~~~~~~~~~~~~PE~~~~~~~~~---~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 228 (261)
T cd05148 160 --------LSSDKKIPYKWTAPEAASHGTFST---KSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAK 228 (261)
T ss_pred --------cccCCCCceEecCHHHHccCCCCc---hhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCC
Confidence 111234677899999998776654 4999999999882211 00 011111 0 0111123
Q ss_pred cHHHHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 689 TVSFFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 689 ~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
..+.+..++..|+...|+ ||++.+....+
T Consensus 229 ~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L 258 (261)
T cd05148 229 CPQEIYKIMLECWAAEPEDRPSFKALREEL 258 (261)
T ss_pred CCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 334555566666666666 77777655443
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-30 Score=270.35 Aligned_cols=220 Identities=22% Similarity=0.286 Sum_probs=176.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE-------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 478 ATNNFSPANKIREGGFNIVYN-------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
..+..+..+.||.|-||.||+ ||||.-+.. .....+.|..|+-+|++++|||||+++|+|.+ ...
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~ 465 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPM 465 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cce
Confidence 344556788999999999996 899988764 34457789999999999999999999999987 568
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
|+|||+++.|.|+ ...++......++.||+.|++|||+. .+|||||..+|||+...--+|++|||++|.+.
T Consensus 466 WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred eEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 9999999999997 45688889999999999999999999 99999999999999999999999999999885
Q ss_pred CCCCCCCcccccccccccc--cccccccccccccccccCCCccceeeccceeec------------cccccccchh-hcc
Q 041467 618 GYEPGTTAETASSSIGING--TVGYVAPVIIAARNLENREKRHTVMSFPQRFAL------------NEKKQNKSIL-KSA 682 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~g--t~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~------------~~~~~~~~i~-~~~ 682 (746)
++... ....| ..-|||||.+.-..++.. +|||-|||-||. ...+.+..+- ...
T Consensus 543 d~~yY---------kaS~~kLPIKWmaPESINfRrFTtA---SDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeR 610 (974)
T KOG4257|consen 543 DDAYY---------KASRGKLPIKWMAPESINFRRFTTA---SDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGER 610 (974)
T ss_pred ccchh---------hccccccceeecCccccchhcccch---hhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCC
Confidence 43321 11122 357999999998888776 999999998871 1111111121 122
Q ss_pred ccCCCccHHHHHHhhCCCCCCCCC-CCCccch
Q 041467 683 GIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSF 713 (746)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~ 713 (746)
...++.+.+.+.++|.+||...|. ||...+.
T Consensus 611 lP~P~nCPp~LYslmskcWayeP~kRPrftei 642 (974)
T KOG4257|consen 611 LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEI 642 (974)
T ss_pred CCCCCCCChHHHHHHHHHhccCcccCCcHHHH
Confidence 233467888888999999999998 9988743
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-30 Score=267.53 Aligned_cols=219 Identities=26% Similarity=0.347 Sum_probs=162.5
Q ss_pred CCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 484 PANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
..+.||.|+||.||+ |+||+++... ....+.+.+|++.+++++||||++++|++...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 357899999999997 7888885432 33467899999999999999999999999988889999999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
+++|+|. ...+++.++..++.|||+||+|||+. +|+||||+|+||++++++.+||+|||+++........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence 9999986 25789999999999999999999999 9999999999999999999999999999876222110
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-c-c----------ccchhhc-cccCCCcc
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-K-Q----------NKSILKS-AGIKGKKT 689 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~-~----------~~~i~~~-~~~~~~~~ 689 (746)
.......+...|+|||++....++.+ +||||||+++|.... . . ...+.+. ........
T Consensus 160 ------~~~~~~~~~~~~~aPE~~~~~~~~~k---sDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (259)
T PF07714_consen 160 ------KNDSSQQLPLRYLAPEVLKDGEYTKK---SDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNC 230 (259)
T ss_dssp ------EESTTSESGGGGS-HHHHHHSEESHH---HHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTS
T ss_pred ------cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccceeccch
Confidence 11222456789999999988876554 999999999982111 1 0 0111111 11122345
Q ss_pred HHHHHHhhCCCCCCCCC-CCCccchh
Q 041467 690 VSFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 690 ~~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
...+..++..||...|+ ||++.+..
T Consensus 231 ~~~~~~li~~C~~~~p~~RPs~~~i~ 256 (259)
T PF07714_consen 231 PKDIYSLIQQCWSHDPEKRPSFQEIL 256 (259)
T ss_dssp BHHHHHHHHHHT-SSGGGS--HHHHH
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 56677888888888887 99887654
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=263.30 Aligned_cols=228 Identities=21% Similarity=0.246 Sum_probs=166.8
Q ss_pred cCCCCCCeEeecCCeeEEE------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 480 NNFSPANKIREGGFNIVYN------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.+|...+.||+|+||.||+ ||||++... .....+.|.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 3577889999999999995 788987643 233456799999999999999999999999999999999
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||+++|++. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 9999999885 34579999999999999999999999 99999999999999999999999999998654322
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc-cccc-----------cchhhccc-cCCC
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE-KKQN-----------KSILKSAG-IKGK 687 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~-~~~~-----------~~i~~~~~-~~~~ 687 (746)
... .........++..|+|||++.+..++. ++||||+||++|... .... ..+..... ....
T Consensus 161 ~~~---~~~~~~~~~~~~~y~~PE~~~~~~~~~---~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~ 234 (269)
T cd05065 161 SDP---TYTSSLGGKIPIRWTAPEAIAYRKFTS---ASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPM 234 (269)
T ss_pred ccc---ccccccCCCcceeecCHhHhccCcccc---hhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcc
Confidence 110 001111112245799999998776655 499999999988311 1110 00100101 1112
Q ss_pred ccHHHHHHhhCCCCCCCCC-CCCccchhhh
Q 041467 688 KTVSFFLSLLSPSCSVFPL-TPSSNSFTLL 716 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~ 716 (746)
.....+..++..|+...|. ||++.++...
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 235 DCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 3334455566666666666 7777755543
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=263.17 Aligned_cols=229 Identities=22% Similarity=0.248 Sum_probs=169.6
Q ss_pred cCCCCCCeEeecCCeeEEE------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 480 NNFSPANKIREGGFNIVYN------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.+|+..+.||+|+||.||+ ||+|.+.... ....+.+.+|++++++++||||+++.+++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 4678889999999999995 6888775442 33456789999999999999999999999999999999
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+|++|||++.......
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 9999999885 34689999999999999999999999 99999999999999999999999999997653321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--cccc----------cchhhccc-cCCC
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQN----------KSILKSAG-IKGK 687 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~~----------~~i~~~~~-~~~~ 687 (746)
... .......++..|+|||++.+..++.+ +|||||||++|... .... ..+..... ....
T Consensus 162 ~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~---~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~ 233 (268)
T cd05063 162 EGT-----YTTSGGKIPIRWTAPEAIAYRKFTSA---SDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPM 233 (268)
T ss_pred ccc-----eeccCCCcCceecCHHHhhcCCcChH---hHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCC
Confidence 110 01111223467999999987766554 99999999988311 1110 01111111 1112
Q ss_pred ccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 688 KTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
.....+..++..|+...|. ||++.++...+++
T Consensus 234 ~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 234 DCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 3344556666666666666 8887776655443
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-33 Score=276.07 Aligned_cols=345 Identities=28% Similarity=0.372 Sum_probs=223.3
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
.+|+.|+.++|.+. .+|+.++.+..|+.|+..+|+++ ..|+.++++.+|..|++.+|++....|..+. ++.|++||.
T Consensus 114 ~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~ 190 (565)
T KOG0472|consen 114 ISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDC 190 (565)
T ss_pred hhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhccc
Confidence 44555555555554 55555555556666666666665 4555566666666666666666444444333 666666665
Q ss_pred cCC---CCcCcccCCCCCCEEeccCCCcc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCC
Q 041467 98 DCG---GRIDSLGHLKSLLLLSLAFNQFL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171 (746)
Q Consensus 98 ~~~---~~~~~~~~l~~L~~L~Ls~N~l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 171 (746)
..| ..++.++.|.+|..|+|..|++. +|++++.|.+|+++.|+|+.........+++|..|||..|++..
T Consensus 191 ~~N~L~tlP~~lg~l~~L~~LyL~~Nki~~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke---- 266 (565)
T KOG0472|consen 191 NSNLLETLPPELGGLESLELLYLRRNKIRFLPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKE---- 266 (565)
T ss_pred chhhhhcCChhhcchhhhHHHHhhhcccccCCCCCccHHHHHHHhcccHHHhhHHHHhcccccceeeecccccccc----
Confidence 542 34566777777777777777773 45667777777777777774333334477777777777777764
Q ss_pred CccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCccccc----------------------------
Q 041467 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISST---------------------------- 223 (746)
Q Consensus 172 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~---------------------------- 223 (746)
.|+.+.-+.+|++||+|+|.|+ .+|.+++++ .|+.|.+.+|.+..+
T Consensus 267 ---~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl--hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~s 340 (565)
T KOG0472|consen 267 ---VPDEICLLRSLERLDLSNNDIS-SLPYSLGNL--HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQS 340 (565)
T ss_pred ---CchHHHHhhhhhhhcccCCccc-cCCcccccc--eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCC
Confidence 5566666777777777777776 566677777 377777777765210
Q ss_pred ---------CC-ccc---cCCCCCCeeecccccceecCCcCCCCCC---CCceeeccccccc------------------
Q 041467 224 ---------IP-HGI---RNLVNLNWLTMESSQLIGTIPPLIGETP---NLQLLNIGGNHLQ------------------ 269 (746)
Q Consensus 224 ---------~p-~~~---~~l~~L~~L~L~~N~l~~~~p~~~~~l~---~L~~L~Ls~N~l~------------------ 269 (746)
.| ..| ..+-+.+.|+++.-+++ .+|+....-. -....+++.|++.
T Consensus 341 e~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~l 419 (565)
T KOG0472|consen 341 EGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVL 419 (565)
T ss_pred cccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHh
Confidence 00 011 11233445555544444 2333222111 2445555665554
Q ss_pred -----ccccccccccChHHhh--hccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccC
Q 041467 270 -----GSILSSLGNLTLQTYL--FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSL 342 (746)
Q Consensus 270 -----~~~~~~l~~l~~l~~l--~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~ 342 (746)
+.+|..++.++.+.++ .|++-..+|..++.+..|++||+|+|+|. .+|..+..+..+ ..+-.++|++...-
T Consensus 420 snn~isfv~~~l~~l~kLt~L~L~NN~Ln~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~l-Etllas~nqi~~vd 497 (565)
T KOG0472|consen 420 SNNKISFVPLELSQLQKLTFLDLSNNLLNDLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTL-ETLLASNNQIGSVD 497 (565)
T ss_pred hcCccccchHHHHhhhcceeeecccchhhhcchhhhhhhhhheecccccccc-cchHHHhhHHHH-HHHHhccccccccC
Confidence 2334444445544443 56666689999999999999999999998 899988887777 45666779997544
Q ss_pred chhhhcccCCceee--------cCCCCCCCCCCCEEEccCCcCc
Q 041467 343 PPEVGNLKNLLRLH--------IPEYPENLSFFELLNLSYNYFG 378 (746)
Q Consensus 343 p~~~~~l~~L~~L~--------lp~~~~~l~~L~~L~ls~N~l~ 378 (746)
|..++++.+|..|+ ||..++++++|+.|++++|.|.
T Consensus 498 ~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 498 PSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 45599999999985 5888999999999999999998
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-30 Score=265.37 Aligned_cols=176 Identities=21% Similarity=0.270 Sum_probs=147.7
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
|+..+.||+|+||.||+ +|+|.+........+.+.+|+++++.++||||+++++++...+..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 56778899999999997 788887655555567789999999999999999999999999999999999999
Q ss_pred Cccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcc
Q 041467 553 GQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626 (746)
Q Consensus 553 g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~ 626 (746)
|++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++++|++|||+++......
T Consensus 87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~------ 157 (282)
T cd06643 87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI------ 157 (282)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc------
Confidence 9885 34689999999999999999999999 99999999999999999999999999987643211
Q ss_pred cccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 627 TASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 627 ~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
.......||..|+|||++.... ....+.++||||+||++|
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~ 199 (282)
T cd06643 158 --QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 199 (282)
T ss_pred --cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHH
Confidence 1122356899999999985321 122345699999999998
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-31 Score=250.00 Aligned_cols=174 Identities=21% Similarity=0.256 Sum_probs=143.7
Q ss_pred CCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhc-CCCCceeeEEEEEecCCcccchhhhcc
Q 041467 483 SPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRN-IRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~-l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
+....||.|+||+|+| .|||+++... ....+++..|.++..+ -+.||||++||++..++..|+.||+|.
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 3457899999999997 7999987553 3567789999986544 568999999999999999999999995
Q ss_pred CCc--cc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 552 NGQ--LR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 552 ~g~--l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
-.- +. ...+++.-.-.|....+.||+||.... .|+|||+||+|||+|..|.+|+||||++..+.+
T Consensus 147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~---- 220 (361)
T KOG1006|consen 147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD---- 220 (361)
T ss_pred hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH----
Confidence 321 11 567888888889989999999998875 899999999999999999999999999987633
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+..+|...|||||.+....- .|+.++||||+|+.+|
T Consensus 221 -----SiAkT~daGCrpYmAPERi~p~~~-gyDiRSDvWSLGITL~ 260 (361)
T KOG1006|consen 221 -----SIAKTVDAGCRPYMAPERIDPSDK-GYDIRSDVWSLGITLY 260 (361)
T ss_pred -----HHHhhhccCCccccChhccCCccC-CcchhhhhhhhcceEe
Confidence 233445789999999999985533 3466799999999998
|
|
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=264.54 Aligned_cols=229 Identities=17% Similarity=0.199 Sum_probs=169.1
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
..+|+..+.||+|+||.||+ ||+|++.... ....+.+.+|+.+++.++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 35688899999999999996 5889876432 3345678899999999999999999999875 4577
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+++||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 899999999885 23589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c---------cchhhc--cccC
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N---------KSILKS--AGIK 685 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~---------~~i~~~--~~~~ 685 (746)
.... .......++..|+|||++.+..++.+ +|||||||++|.... .. . ...+.. ....
T Consensus 162 ~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~---~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~ 232 (279)
T cd05109 162 DETE------YHADGGKVPIKWMALESILHRRFTHQ---SDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQ 232 (279)
T ss_pred ccce------eecCCCccchhhCCHHHhccCCCCch---hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC
Confidence 2111 11112345678999999987766554 999999999883211 11 0 001111 1111
Q ss_pred CCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 686 GKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
.....+.+..++..|+...|. ||+..+....+..+
T Consensus 233 ~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~ 268 (279)
T cd05109 233 PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM 268 (279)
T ss_pred CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 122334555666666666776 88888766544444
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=264.50 Aligned_cols=176 Identities=24% Similarity=0.313 Sum_probs=144.2
Q ss_pred CCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC--cccc
Q 041467 482 FSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID--FEGF 545 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~--~~~l 545 (746)
|+..+.||+|+||.||. ||+|++.... ......+.+|++++++++||||+++++++...+ ..++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37889999999999963 7899886442 234567889999999999999999999887643 5789
Q ss_pred hhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 546 DFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 546 v~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
+|||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+|++|||+++.......
T Consensus 86 v~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 86 IMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred EecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 99999999886 44689999999999999999999999 999999999999999999999999999987643211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. .......++..|+|||.+.+..++. ++|||||||++|
T Consensus 163 ~~-----~~~~~~~~~~~~~~PE~~~~~~~~~---~~Di~slG~~l~ 201 (283)
T cd05080 163 YY-----RVREDGDSPVFWYAVECLKENKFSY---ASDVWSFGVTLY 201 (283)
T ss_pred hh-----ccCCCCCCCceeeCHhHhcccCCCc---ccccHHHHHHHH
Confidence 10 0011234567799999998776654 599999999998
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=265.98 Aligned_cols=231 Identities=17% Similarity=0.237 Sum_probs=170.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
..++|++.+.||+|+||.||+ ||+|.+.... ......+.+|+.+++.++||||+++++++.+.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 467899999999999999995 6888765332 2234468899999999999999999999999999
Q ss_pred ccchhhhccCCccc----c-----------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEE
Q 041467 543 EGFDFKAISNGQLR----L-----------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV 607 (746)
Q Consensus 543 ~~lv~e~~~~g~l~----~-----------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki 607 (746)
.++||||+++|+|. . ...++..+..++.|++.|++|||+. +|+||||||+||++++++.+|+
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEE
Confidence 99999999999986 0 1235678899999999999999999 9999999999999999999999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchh
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSIL 679 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~ 679 (746)
+|||+++........ .......++..|+|||.+.+..++. ++|||||||++|.... .. ...+.
T Consensus 161 ~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~~pE~~~~~~~~~---~~DvwslG~~l~el~~~~~~p~~~~~~~~~~ 231 (288)
T cd05061 161 GDFGMTRDIYETDYY------RKGGKGLLPVRWMAPESLKDGVFTT---SSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 231 (288)
T ss_pred CcCCccccccccccc------cccCCCcccccccCHHHhccCCCCh---HhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 999999865332211 0111234567899999998776655 4999999999882211 00 00111
Q ss_pred h----c-cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 680 K----S-AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 680 ~----~-~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
. . .........+.+..++..|....|+ ||++.+....+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 232 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1 0 1111123345566666666666777 88888766555543
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=262.58 Aligned_cols=228 Identities=21% Similarity=0.225 Sum_probs=167.7
Q ss_pred cCCCCCCeEeecCCeeEEE------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 480 NNFSPANKIREGGFNIVYN------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
++|+..+.||+|+||.||+ ||+|.+.... ....+.+.+|+.++++++||||+++++++...+..+++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 4678889999999999995 6788775432 23456789999999999999999999999999999999
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++.+....
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 9999999885 23579999999999999999999999 99999999999999999999999999998764322
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--cccc----------cchhhccc-cCCC
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQN----------KSILKSAG-IKGK 687 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~~----------~~i~~~~~-~~~~ 687 (746)
.. ........++..|+|||++.+..++.+ +|||||||++|... .... ..+.+... ....
T Consensus 161 ~~-----~~~~~~~~~~~~y~~pe~~~~~~~~~~---~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (267)
T cd05066 161 EA-----AYTTRGGKIPIRWTAPEAIAYRKFTSA---SDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPM 232 (267)
T ss_pred ce-----eeecCCCccceeecCHhHhccCccCch---hhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCC
Confidence 11 011112234568999999987766554 99999999988311 1110 00111111 1112
Q ss_pred ccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 688 KTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
...+.+..++.+|+...|. ||++.++...++
T Consensus 233 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 264 (267)
T cd05066 233 DCPAALHQLMLDCWQKDRNERPKFEQIVSILD 264 (267)
T ss_pred CCCHHHHHHHHHHcccCchhCCCHHHHHHHHH
Confidence 2234455555666666666 777776655443
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=260.56 Aligned_cols=171 Identities=20% Similarity=0.296 Sum_probs=140.8
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCcc
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL 555 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l 555 (746)
+.||+|+||.||+ ||+|.+.... .+....+.+|++++++++||||++++++|......++||||++++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4689999999996 8899765332 33456789999999999999999999999999999999999999987
Q ss_pred c------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccccc
Q 041467 556 R------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETAS 629 (746)
Q Consensus 556 ~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~ 629 (746)
. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++........ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~------~ 151 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA------S 151 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccccccccc------c
Confidence 6 23578999999999999999999999 9999999999999999999999999998764321110 0
Q ss_pred ccccccccccccccccccccccccCCCccceeeccceee
Q 041467 630 SSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 630 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......++..|+|||.+.+..++.+ +||||+||++|
T Consensus 152 ~~~~~~~~~~y~aPE~~~~~~~~~~---~Dv~slG~il~ 187 (252)
T cd05084 152 TGGMKQIPVKWTAPEALNYGRYSSE---SDVWSFGILLW 187 (252)
T ss_pred cCCCCCCceeecCchhhcCCCCChH---HHHHHHHHHHH
Confidence 0011123457999999987776554 99999999998
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.6e-30 Score=279.81 Aligned_cols=172 Identities=23% Similarity=0.284 Sum_probs=145.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
...|...+.||+|+||.||+ ||||... ...+.+|++++++++|||||++++++...+..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 45788999999999999997 8888532 23467899999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+. |++. ...+++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 242 ~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~- 316 (461)
T PHA03211 242 YR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST- 316 (461)
T ss_pred cC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccccccc-
Confidence 85 4443 24689999999999999999999999 9999999999999999999999999999875332111
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeec
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFAL 669 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~ 669 (746)
......+||..|||||++.+..++. ++|||||||++|.
T Consensus 317 -----~~~~~~~GT~~Y~APE~~~~~~~~~---~sDvwSlGviL~E 354 (461)
T PHA03211 317 -----PFHYGIAGTVDTNAPEVLAGDPYTP---SVDIWSAGLVIFE 354 (461)
T ss_pred -----ccccccCCCcCCcCHHHHcCCCCCc---hHHHHHHHHHHHH
Confidence 1122467999999999998887755 4999999999993
|
|
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=265.77 Aligned_cols=180 Identities=23% Similarity=0.344 Sum_probs=148.0
Q ss_pred hhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhh-hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecC
Q 041467 477 KATNNFSPANKIREGGFNIVYN--------------VAMKVANLK-QKEASRSFAAEFNALRNI-RHRNLIKIITICSSI 540 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~ 540 (746)
...++|+..+.||+|+||.||+ ||+|++... ..+....+.+|+++++++ +||||+++++++...
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 3456788899999999999995 678877543 223345688999999999 799999999999999
Q ss_pred CcccchhhhccCCccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee
Q 041467 541 DFEGFDFKAISNGQLR---------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~---------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl 599 (746)
+..+++|||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEE
Confidence 9999999999998874 13578899999999999999999999 99999999999999
Q ss_pred CCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 600 DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 600 ~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++++.+|++|||+++.+...... .......++..|+|||++.+..++. ++|||||||++|
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 225 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYY------RKTTNGRLPVKWMAPEALFDRVYTH---QSDVWSFGVLLW 225 (293)
T ss_pred cCCCeEEeCccccccccccccce------eccCCCCCCccccCHHHhccCCcCc---ccceeehhhHHH
Confidence 99999999999999876432110 1111233567899999988776655 499999999998
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-30 Score=263.88 Aligned_cols=173 Identities=20% Similarity=0.248 Sum_probs=137.5
Q ss_pred eEeecCCeeEEE-----------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCc
Q 041467 487 KIREGGFNIVYN-----------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQ 554 (746)
Q Consensus 487 ~ig~g~~g~v~~-----------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~ 554 (746)
.||+|+||.||+ ||+|.+.... ......+.+|+++++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 589999999996 5777654332 2334568899999999999999999999999999999999999999
Q ss_pred cc----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 555 LR----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 555 l~----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+. ....++.....++.||+.|++|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-- 156 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY-- 156 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhe--
Confidence 86 12246778899999999999999999 9999999999999999999999999998754221110
Q ss_pred ccccccccccccccccccccccccccc----ccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNL----ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~----~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|+|||++..... ...+.++||||+||++|
T Consensus 157 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~ 200 (269)
T cd05042 157 ----ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMW 200 (269)
T ss_pred ----eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHH
Confidence 01122446778999999864321 12355799999999998
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-30 Score=269.71 Aligned_cols=177 Identities=18% Similarity=0.261 Sum_probs=145.6
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||+|++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 36788999999999999996 8999886443 2233467889999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 159 (309)
T cd07872 85 YLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK-- 159 (309)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcc--
Confidence 99753322 23478999999999999999999999 999999999999999999999999999976422111
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+... ++.++||||+||++|
T Consensus 160 ------~~~~~~~~~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 196 (309)
T cd07872 160 ------TYSNEVVTLWYRPPDVLLGSSE--YSTQIDMWGVGCIFF 196 (309)
T ss_pred ------ccccccccccccCCHHHhCCCC--CCcHHHHHHHHHHHH
Confidence 1123567899999999875432 234699999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=262.66 Aligned_cols=223 Identities=22% Similarity=0.291 Sum_probs=162.5
Q ss_pred CCCCeEeecCCeeEEE-----------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC------Ccc
Q 041467 483 SPANKIREGGFNIVYN-----------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSI------DFE 543 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~-----------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~------~~~ 543 (746)
...+.||+|+||.||+ ||+|.++.. .....+.+.+|+++++.++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 4578899999999996 788877543 234456789999999999999999999987542 246
Q ss_pred cchhhhccCCccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccc
Q 041467 544 GFDFKAISNGQLR-----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGl 612 (746)
+++|||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence 7899999999874 13478999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchhh---c
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSILK---S 681 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~~---~ 681 (746)
++.+...... .......+++.|+|||+..+..++.+ +|||||||++|.... .. ...+.. .
T Consensus 159 ~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~---~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~ 229 (272)
T cd05075 159 SKKIYNGDYY------RQGRIAKMPVKWIAIESLADRVYTTK---SDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ 229 (272)
T ss_pred ccccCcccce------ecCCcccCCcccCCHHHccCCCcChH---HHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 9876432110 01112345678999999988776554 999999999883211 10 001111 0
Q ss_pred --cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 682 --AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 682 --~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
...........+..++.+|+...|+ ||++.+....+
T Consensus 230 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 268 (272)
T cd05075 230 GNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCEL 268 (272)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 0011123345566666666666776 88777665443
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=268.11 Aligned_cols=230 Identities=20% Similarity=0.263 Sum_probs=171.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE----------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEec
Q 041467 478 ATNNFSPANKIREGGFNIVYN----------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSS 539 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~----------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~ 539 (746)
..++|+..+.||+|+||.||+ ||+|+..... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 456788899999999999993 6788775332 33456789999999999 79999999999999
Q ss_pred CCcccchhhhccCCccc----c-----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCee
Q 041467 540 IDFEGFDFKAISNGQLR----L-----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~----~-----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NIL 598 (746)
....+++|||+++|+|. . ..+++.++..++.||+.|++|||+. +|+||||||+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEE
Confidence 99999999999998875 1 2467888999999999999999999 9999999999999
Q ss_pred eCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc--cc--
Q 041467 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQ-- 674 (746)
Q Consensus 599 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~-- 674 (746)
+++++.+||+|||+++........ .......++..|+|||++.+..++.+ +|||||||++|.... ..
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~el~~~g~~p~ 240 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQ---SDVWSFGVLMWEIFTLGGSPY 240 (304)
T ss_pred EcCCCcEEECCCccceeccccccc------ccccCCCCCceeeCchhhccCCCCch---hhHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999876332211 11122345778999999988776554 999999999882211 10
Q ss_pred ----ccchhh---ccc--cCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 675 ----NKSILK---SAG--IKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 675 ----~~~i~~---~~~--~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
...+.. ... .........+..++..|+...|. ||++.++...+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~ 295 (304)
T cd05101 241 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR 295 (304)
T ss_pred ccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 111111 100 11123345566666666666676 8888876655444
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-30 Score=263.81 Aligned_cols=226 Identities=21% Similarity=0.273 Sum_probs=173.1
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|++|.||+ ||||.+... ......++.+|+++++.++||||+++++++...+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999996 889976542 2334467889999999999999999999999999999999
Q ss_pred hhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 548 KAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 548 e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
||++++++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999998875 23578999999999999999999999 999999999999999999999999999876532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccccc-------------cchhh--ccc
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQN-------------KSILK--SAG 683 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~~-------------~~i~~--~~~ 683 (746)
... ......|+..|+|||++.+..++. ++||||+||++|....... ..+.. ..+
T Consensus 159 ~~~--------~~~~~~~~~~~~ape~~~~~~~~~---~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 227 (267)
T cd08229 159 KTT--------AAHSLVGTPYYMSPERIHENGYNF---KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP 227 (267)
T ss_pred CCc--------ccccccCCcCccCHHHhcCCCccc---hhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCC
Confidence 211 112356899999999998877654 4999999999882211110 00000 011
Q ss_pred cCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 684 IKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
.+.....+.+..++.+|+...|+ ||++.++.....+
T Consensus 228 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~ 264 (267)
T cd08229 228 LPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKR 264 (267)
T ss_pred CCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence 12223445666777777777777 8888876655544
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-30 Score=293.82 Aligned_cols=182 Identities=20% Similarity=0.314 Sum_probs=146.0
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFE 543 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~ 543 (746)
...++|++.+.||+|+||.||+ ||+|++.... ......+.+|+.++++++|||||+++++|... ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 3457899999999999999996 7888876432 33456789999999999999999999998654 468
Q ss_pred cchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCC----CCeEEcCCCCCCeeeCC---------
Q 041467 544 GFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQ----PSIVHGDLKPSNILLDQ--------- 601 (746)
Q Consensus 544 ~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~----~~ivHrDlkp~NILl~~--------- 601 (746)
|+||||+++|+|. ...+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 8999999999985 2468999999999999999999998531 25999999999999964
Q ss_pred --------CCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 602 --------DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 602 --------~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.+.+||+|||+++.+.... ......||+.|+|||++.+... .++.++|||||||++|
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s---------~~~s~vGTp~YmAPEvL~ge~~-~~s~KSDVWSLG~ILY 234 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES---------MAHSCVGTPYYWSPELLLHETK-SYDDKSDMWALGCIIY 234 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc---------cccccCCCccccCHHHHhccCC-CCCchhHHHHHHHHHH
Confidence 3458999999998653211 1223579999999999865321 1244599999999998
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=261.63 Aligned_cols=173 Identities=22% Similarity=0.269 Sum_probs=149.9
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
++|+..+.||+|+||.||+ ||+|++... .....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3678889999999999997 899987643 233456789999999999999999999999999999999999
Q ss_pred ccCCccc-ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccc
Q 041467 550 ISNGQLR-LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628 (746)
Q Consensus 550 ~~~g~l~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~ 628 (746)
+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--------- 148 (279)
T cd06619 81 MDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--------- 148 (279)
T ss_pred CCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---------
Confidence 9999886 45678999999999999999999999 9999999999999999999999999999765221
Q ss_pred cccccccccccccccccccccccccCCCccceeeccceee
Q 041467 629 SSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 629 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||..|+|||++.+..++. ++||||+||++|
T Consensus 149 -~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwslG~~l~ 184 (279)
T cd06619 149 -IAKTYVGTNAYMAPERISGEQYGI---HSDVWSLGISFM 184 (279)
T ss_pred -cccCCCCChhhcCceeecCCCCCC---cchHHHHHHHHH
Confidence 122367899999999998876654 499999999998
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=258.72 Aligned_cols=174 Identities=20% Similarity=0.243 Sum_probs=148.4
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
+|+..+.||+|+||.||+ ||+|.+... .....+.+.+|+.++++++||||+++++++.+.+..+++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 477889999999999996 799987533 2334567889999999999999999999999999999999999
Q ss_pred cCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++|++. ...+++..+..++.|++.|++|||+. +|+|+||||+||++++++.++++|||.++......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--- 154 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG--- 154 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc---
Confidence 999874 23478999999999999999999999 99999999999999999999999999997653221
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......|+..|+|||++.+..++. ++||||+||++|
T Consensus 155 -----~~~~~~~~~~~~~aPE~~~~~~~~~---~~Dv~slG~i~~ 191 (255)
T cd08219 155 -----AYACTYVGTPYYVPPEIWENMPYNN---KSDIWSLGCILY 191 (255)
T ss_pred -----cccccccCCccccCHHHHccCCcCc---hhhhhhhchhhe
Confidence 1122356899999999998776655 499999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=261.24 Aligned_cols=178 Identities=19% Similarity=0.329 Sum_probs=148.0
Q ss_pred hcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.++|+..+.||+|+||.||+ ||+|.+.... ......+.+|+++++.++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 45788899999999999995 7888875332 23345688999999999999999999999999999
Q ss_pred cchhhhccCCcccc---------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEc
Q 041467 544 GFDFKAISNGQLRL---------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608 (746)
Q Consensus 544 ~lv~e~~~~g~l~~---------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 608 (746)
++||||+++|+|.. ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 99999999998851 1367889999999999999999998 99999999999999999999999
Q ss_pred cccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 609 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|||+++.+...... .......++..|+|||.+.+..++. ++|||||||++|
T Consensus 162 dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 212 (277)
T cd05032 162 DFGMTRDIYETDYY------RKGGKGLLPVRWMAPESLKDGVFTT---KSDVWSFGVVLW 212 (277)
T ss_pred CcccchhhccCccc------ccCCCCCccccccCHHHHhcCCCCc---ccchHHHHHHHH
Confidence 99999876432211 1112245678999999998776655 499999999998
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=267.73 Aligned_cols=226 Identities=22% Similarity=0.253 Sum_probs=165.1
Q ss_pred hcCCCCCCeEeecCCeeEEE-----------EEeehhhhh-hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-----------VAMKVANLK-QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-----------vavK~~~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~l 545 (746)
.++|+..+.||+|+||.||+ +|+|..... .....+.+.+|+++++++ +||||+++++++...+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 35688889999999999997 466665432 233456788999999999 89999999999999999999
Q ss_pred hhhhccCCcccc---------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 546 DFKAISNGQLRL---------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 546 v~e~~~~g~l~~---------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
||||+++|++.. ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCc
Confidence 999999988751 1468899999999999999999999 9999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------cc
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NK 676 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~ 676 (746)
+||+|||+++..... .......++..|+|||++.+..++. ++|||||||++|.... .+ ..
T Consensus 163 ~kl~dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ellt~g~~p~~~~~~~ 230 (303)
T cd05088 163 AKIADFGLSRGQEVY---------VKKTMGRLPVRWMAIESLNYSVYTT---NSDVWSYGVLLWEIVSLGGTPYCGMTCA 230 (303)
T ss_pred EEeCccccCcccchh---------hhcccCCCcccccCHHHHhccCCcc---cccchhhhhHHHHHHhcCCCCcccCChH
Confidence 999999998642110 0011123466899999987766554 5999999999983221 11 00
Q ss_pred chhhcc-----ccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 677 SILKSA-----GIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 677 ~i~~~~-----~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
...... ........+.+..++..|+...|+ ||++.+....+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~ 279 (303)
T cd05088 231 ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 279 (303)
T ss_pred HHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111111 001112334555666666666666 8887766554443
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=266.59 Aligned_cols=176 Identities=20% Similarity=0.294 Sum_probs=151.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
..+|+..+.||+|+||.||+ ||+|.+........+.+.+|+.+++.++||||+++++++......++||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 45788999999999999997 889988765544556789999999999999999999999999999999999
Q ss_pred ccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 550 ISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 550 ~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 99 ~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~---- 171 (296)
T cd06654 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---- 171 (296)
T ss_pred cCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccccc----
Confidence 9999986 34578999999999999999999999 999999999999999999999999999876532211
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|++.|+|||.+.+..++. ++|||||||++|
T Consensus 172 ----~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~s~Gvil~ 207 (296)
T cd06654 172 ----KRSTMVGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAI 207 (296)
T ss_pred ----ccCcccCCccccCHHHHcCCCCCc---cchHHHHHHHHH
Confidence 112356889999999998766654 599999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.1e-30 Score=269.10 Aligned_cols=170 Identities=25% Similarity=0.398 Sum_probs=141.6
Q ss_pred CCCeEeecCCeeEEE---------EE---eehhhh-hhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc--ccchhh
Q 041467 484 PANKIREGGFNIVYN---------VA---MKVANL-KQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF--EGFDFK 548 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~---------va---vK~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~--~~lv~e 548 (746)
..++||+|+|-+||| || ||.-.. +..+..++|..|+.+|+.|+|||||++|++|.+... ..+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 467899999999999 22 232221 124456889999999999999999999999999775 778999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-CCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-DVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DfGla~~~~~~~~~ 622 (746)
++..|+|+ .+.++....+.|++||++||.|||++ .|+|+|||||.+||+|+. .|.|||+|.|+|..+...
T Consensus 124 L~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s--- 199 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS--- 199 (632)
T ss_pred cccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc---
Confidence 99999997 56788999999999999999999998 678999999999999985 699999999999986432
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....++|||-|||||+.. ..|+.. +||||||+-|.
T Consensus 200 -------~aksvIGTPEFMAPEmYE-E~YnE~---VDVYaFGMCmL 234 (632)
T KOG0584|consen 200 -------HAKSVIGTPEFMAPEMYE-ENYNEL---VDVYAFGMCML 234 (632)
T ss_pred -------ccceeccCccccChHHHh-hhcchh---hhhhhhhHHHH
Confidence 223489999999999987 556555 99999996544
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=260.10 Aligned_cols=176 Identities=23% Similarity=0.349 Sum_probs=147.9
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.++|+..+.||+|++|.||+ ||+|.++... ...+.+.+|++++++++||||+++++++...+..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 45688899999999999996 8999876432 23466899999999999999999999999999999999999
Q ss_pred cCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+++++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~- 159 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE- 159 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc-
Confidence 999885 13589999999999999999999999 9999999999999999999999999999876422110
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...+..++..|+|||++.+..++.+ +|||||||++|
T Consensus 160 ------~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 195 (261)
T cd05068 160 ------AREGAKFPIKWTAPEAALYNRFSIK---SDVWSFGILLT 195 (261)
T ss_pred ------ccCCCcCceeccCccccccCCCCch---hhHHHHHHHHH
Confidence 1111223468999999987766554 99999999988
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=263.97 Aligned_cols=172 Identities=24% Similarity=0.319 Sum_probs=146.4
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
|+..+.||+|+||.||+ ||||.+.... ....+.+.+|+.++++++||+|+++++++.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 67778999999999996 8999876432 22234577899999999999999999999999999999999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 156 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence 9999885 23588999999999999999999998 99999999999999999999999999987642211
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||..|+|||++.+..++. ++||||+||++|
T Consensus 157 -------~~~~~~g~~~y~aPE~~~~~~~~~---~~DiwslG~~l~ 192 (285)
T cd05630 157 -------TIKGRVGTVGYMAPEVVKNERYTF---SPDWWALGCLLY 192 (285)
T ss_pred -------cccCCCCCccccChHHHcCCCCCC---ccccHHHHHHHH
Confidence 112357899999999998876654 499999999988
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=267.30 Aligned_cols=227 Identities=20% Similarity=0.261 Sum_probs=167.4
Q ss_pred cCCCCCCeEeecCCeeEEE-----------EEeehhhhh-hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccch
Q 041467 480 NNFSPANKIREGGFNIVYN-----------VAMKVANLK-QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-----------vavK~~~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv 546 (746)
++|+..+.||+|+||.||+ +|+|.++.. .....+.+.+|+++++++ +||||+++++++...+..+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 5788899999999999996 477766532 233456789999999999 799999999999999999999
Q ss_pred hhhccCCccc----c-----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcE
Q 041467 547 FKAISNGQLR----L-----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605 (746)
Q Consensus 547 ~e~~~~g~l~----~-----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 605 (746)
+||+++|++. . ..+++.++..++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 9999999874 1 2478899999999999999999998 99999999999999999999
Q ss_pred EEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c------cc
Q 041467 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N------KS 677 (746)
Q Consensus 606 ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~------~~ 677 (746)
||+|||++...... .......++..|+|||++.+..++. ++|||||||++|.... .. . ..
T Consensus 159 kl~dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwSlG~il~el~t~g~~pf~~~~~~~ 226 (297)
T cd05089 159 KIADFGLSRGEEVY---------VKKTMGRLPVRWMAIESLNYSVYTT---KSDVWSFGVLLWEIVSLGGTPYCGMTCAE 226 (297)
T ss_pred EECCcCCCccccce---------eccCCCCcCccccCchhhccCCCCc---hhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 99999998643110 0011122355799999998776654 4999999999983221 11 0 00
Q ss_pred hhh----c-cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 678 ILK----S-AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 678 i~~----~-~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
.+. . .........+.+..++..|+...|. ||++.++...+..+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 227 LYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111 0 1111123445566677777777777 888887765544433
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-30 Score=274.70 Aligned_cols=170 Identities=22% Similarity=0.300 Sum_probs=143.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
...+|+..+.||+|+||.||+ ||+|+... .....|+.++++++|||||++++++......++|||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 345799999999999999997 78886432 224569999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++.+.... ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 138 ~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 210 (357)
T PHA03209 138 HYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA---- 210 (357)
T ss_pred ccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccC----
Confidence 98643322 35689999999999999999999999 9999999999999999999999999999753211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+..||..|+|||++.+..++.+ +|||||||++|
T Consensus 211 -----~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwSlGvvl~ 247 (357)
T PHA03209 211 -----PAFLGLAGTVETNAPEVLARDKYNSK---ADIWSAGIVLF 247 (357)
T ss_pred -----cccccccccccccCCeecCCCCCCch---hhHHHHHHHHH
Confidence 11234679999999999988777554 99999999998
|
|
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=266.45 Aligned_cols=230 Identities=18% Similarity=0.221 Sum_probs=169.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCC
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSSID 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~ 541 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 345788999999999999984 7888776432 33346789999999999 7999999999999999
Q ss_pred cccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccc
Q 041467 542 FEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~ 614 (746)
..+++|||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcccc
Confidence 999999999999885 12379999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--cccc----------cchhhcc
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQN----------KSILKSA 682 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~~----------~~i~~~~ 682 (746)
........ .......++..|+|||++.+..++.+ +||||+||++|... .... .......
T Consensus 190 ~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~ 260 (302)
T cd05055 190 DIMNDSNY------VVKGNARLPVKWMAPESIFNCVYTFE---SDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEG 260 (302)
T ss_pred cccCCCce------eecCCCCcccccCCHhhhccCCCCcH---hHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcC
Confidence 65332110 01112346788999999988776554 99999999998321 1111 0011100
Q ss_pred -c-cCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 683 -G-IKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 683 -~-~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
. .......+.+..++.+|+...|+ ||+..++...+.+
T Consensus 261 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 261 YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 0 01112234455566666666666 8888776655443
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=261.24 Aligned_cols=177 Identities=23% Similarity=0.335 Sum_probs=146.9
Q ss_pred CCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Cccc
Q 041467 481 NFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFEG 544 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~~ 544 (746)
.|+..+.||+|+||.||. ||+|.+.... ....+.+.+|++++++++||||+++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467889999999999983 8999876442 33456799999999999999999999998875 4678
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+||||+++++|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccccccc
Confidence 999999999986 23579999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... ........|+..|+|||++.+..++. ++|||||||++|
T Consensus 162 ~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~---~~Di~slG~il~ 203 (284)
T cd05079 162 DKEY-----YTVKDDLDSPVFWYAPECLIQSKFYI---ASDVWSFGVTLY 203 (284)
T ss_pred Cccc-----eeecCCCCCCccccCHHHhccCCCCc---cccchhhhhhhh
Confidence 2211 01112355778899999988776654 499999999998
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=260.29 Aligned_cols=178 Identities=21% Similarity=0.335 Sum_probs=149.9
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh-----hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ-----KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-----~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
++|+..+.||+|++|.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688999999999999996 7999875331 2234578999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
++||++++++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~ 158 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 158 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceeccccc
Confidence 99999999886 34678999999999999999999999 99999999999999999999999999997653221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. ........|+..|+|||++.+..++. ++||||+||++|
T Consensus 159 ~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 198 (263)
T cd06625 159 SS-----GTGMKSVTGTPYWMSPEVISGEGYGR---KADVWSVGCTVV 198 (263)
T ss_pred cc-----cccccCCCcCccccCcceeccCCCCc---hhhhHHHHHHHH
Confidence 11 01112356889999999998877654 599999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=260.41 Aligned_cols=223 Identities=21% Similarity=0.277 Sum_probs=160.9
Q ss_pred CeEeecCCeeEEE------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEec-CCcccchhhhcc
Q 041467 486 NKIREGGFNIVYN------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSS-IDFEGFDFKAIS 551 (746)
Q Consensus 486 ~~ig~g~~g~v~~------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~~lv~e~~~ 551 (746)
+.||+|+||.||+ ||||.+... .....+.+.+|+.+++.++||||+++++++.. ++..+++|||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 4689999999995 788887532 23445678899999999999999999998764 456889999999
Q ss_pred CCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 552 NGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 552 ~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
+|++. ....++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.+......
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~--- 154 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY--- 154 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcce---
Confidence 99886 23457788899999999999999999 9999999999999999999999999999865432110
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceeecccc-cccc-----------chhhc-cccCCCccHHH
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQNK-----------SILKS-AGIKGKKTVSF 692 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~~~-----------~i~~~-~~~~~~~~~~~ 692 (746)
.........++..|+|||++.+..++. ++|||||||++|.... .... .+... .........+.
T Consensus 155 -~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (262)
T cd05058 155 -SVHNHTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDP 230 (262)
T ss_pred -eecccccCcCCccccChhHhccCccch---HHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHH
Confidence 001112345677899999998776655 4999999999883211 1100 01000 11111223345
Q ss_pred HHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 693 FLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 693 ~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
+.+++..|+...|+ ||+..++...++
T Consensus 231 ~~~li~~cl~~~p~~Rp~~~~il~~l~ 257 (262)
T cd05058 231 LYEVMLSCWHPKPEMRPTFSELVSRIE 257 (262)
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 56666666666666 888776654433
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=276.11 Aligned_cols=232 Identities=18% Similarity=0.173 Sum_probs=173.9
Q ss_pred hhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCC-CCceeeEEEEEecC
Q 041467 477 KATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIR-HRNLIKIITICSSI 540 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~ 540 (746)
...++|...+.||+|+||.||+ ||||++.... ....+.+.+|+++++++. |||||+++++|...
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 3445678889999999999994 7999986542 233456889999999998 99999999999999
Q ss_pred CcccchhhhccCCccc-----c----------------------------------------------------------
Q 041467 541 DFEGFDFKAISNGQLR-----L---------------------------------------------------------- 557 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~-----~---------------------------------------------------------- 557 (746)
+..++||||+++|+|. .
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 9999999999998874 0
Q ss_pred ----------------------------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCe
Q 041467 558 ----------------------------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597 (746)
Q Consensus 558 ----------------------------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NI 597 (746)
..+++.++..++.|++.|++|||+. +|+||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceE
Confidence 1256778899999999999999998 999999999999
Q ss_pred eeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c
Q 041467 598 LLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N 675 (746)
Q Consensus 598 Ll~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~ 675 (746)
++++++.+|++|||+++........ .......|+..|||||++.+..++. ++|||||||++|.... .. .
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwslGvil~e~l~~g~~P 341 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNY------ISKGSTFLPLKWMAPESIFNNLYTT---LSDVWSFGILLWEIFTLGGTP 341 (401)
T ss_pred EEeCCCEEEEEecCcceeccccccc------ccCCCcCCCCceeChHHhcCCCCCc---HhHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999865322110 1112245788999999998776654 4999999999882111 10 0
Q ss_pred ------c----chhhc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 676 ------K----SILKS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 676 ------~----~i~~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
. ..... ...........+..++..|+...|. ||++.++...++++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 342 YPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred CCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 0 00000 0111123446677788888888887 99999877665543
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=285.08 Aligned_cols=178 Identities=22% Similarity=0.252 Sum_probs=141.3
Q ss_pred hhcCCCCCCeEeecCCeeEEEEEeehh------------------------hhh---hhhhhHHHHHHHHHhhcCCCCce
Q 041467 478 ATNNFSPANKIREGGFNIVYNVAMKVA------------------------NLK---QKEASRSFAAEFNALRNIRHRNL 530 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~vavK~~------------------------~~~---~~~~~~~~~~E~~~l~~l~HpnI 530 (746)
..++|++.+.||+|+||+||++++|.. ... .......+.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 356899999999999999997543310 000 11223467899999999999999
Q ss_pred eeEEEEEecCCcccchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC
Q 041467 531 IKIITICSSIDFEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ 601 (746)
Q Consensus 531 v~l~~~~~~~~~~~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~ 601 (746)
|++++++...+..|++++++....+. .......++..++.|++.||+|||+. +||||||||+|||++.
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNC 302 (501)
T ss_pred CcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC
Confidence 99999999999999998887543322 11234567788999999999999999 9999999999999999
Q ss_pred CCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 602 DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 602 ~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++.+||+|||+++.+..... ....+.+||..|+|||++.+..++.+ +|||||||++|
T Consensus 303 ~~~vkL~DFGla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwSlGvil~ 359 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKERE-------AFDYGWVGTVATNSPEILAGDGYCEI---TDIWSCGLILL 359 (501)
T ss_pred CCCEEEEeCCCceecCcccc-------cccccccCCcCCCCchhhcCCCCCcH---HHHHHHHHHHH
Confidence 99999999999987633211 11234679999999999988777554 99999999998
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=263.83 Aligned_cols=172 Identities=23% Similarity=0.389 Sum_probs=139.2
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcC---CCCceeeEEEEEecC-----C
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNI---RHRNLIKIITICSSI-----D 541 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l---~HpnIv~l~~~~~~~-----~ 541 (746)
+|+..+.||+|+||.||+ ||+|++.... ......+.+|+++++.+ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 478889999999999997 8999876432 12234566777777665 799999999998653 3
Q ss_pred cccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccc
Q 041467 542 FEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~ 614 (746)
..+++||++.+ ++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCccc
Confidence 47899999975 442 23489999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ......||..|+|||++.+..++. ++||||+||++|
T Consensus 157 ~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~---~~DiwslG~~l~ 198 (288)
T cd07863 157 IYSCQM---------ALTPVVVTLWYRAPEVLLQSTYAT---PVDMWSVGCIFA 198 (288)
T ss_pred cccCcc---------cCCCccccccccCchHhhCCCCCC---cchhhhHHHHHH
Confidence 653211 112356899999999998776655 499999999988
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=267.68 Aligned_cols=172 Identities=22% Similarity=0.263 Sum_probs=135.9
Q ss_pred CCeEeecCCeeEEE-----------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccccchhhhcc
Q 041467 485 ANKIREGGFNIVYN-----------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFEGFDFKAIS 551 (746)
Q Consensus 485 ~~~ig~g~~g~v~~-----------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~~lv~e~~~ 551 (746)
.+.||+|+||.||+ ||+|++... .....+.+|++++++++|||||++++++... ...+++|||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 46899999999996 788877532 2234578999999999999999999998653 45789999986
Q ss_pred CCccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee----CCCCcEEEccccccc
Q 041467 552 NGQLR-------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL----DQDVVTHVGDLGLAK 614 (746)
Q Consensus 552 ~g~l~-------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl----~~~~~~ki~DfGla~ 614 (746)
+.... ...+++..+..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+|+
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 43211 12588999999999999999999999 99999999999999 456899999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....... .........||+.|||||++.+... ++.++||||+||++|
T Consensus 161 ~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 207 (317)
T cd07868 161 LFNSPLK-----PLADLDPVVVTFWYRAPELLLGARH--YTKAIDIWAIGCIFA 207 (317)
T ss_pred ccCCCCc-----cccccCCccccccccCCHHHcCCCC--cCchhhHHHHHHHHH
Confidence 7633211 1112234678999999999987542 234599999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=258.20 Aligned_cols=221 Identities=18% Similarity=0.202 Sum_probs=163.5
Q ss_pred eEeecCCeeEEE-----------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCC
Q 041467 487 KIREGGFNIVYN-----------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG 553 (746)
Q Consensus 487 ~ig~g~~g~v~~-----------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g 553 (746)
.||+|+||.||+ ||+|++.... ....+.+.+|+.+++.++||||+++++++.. +..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 589999999995 7899876432 2345678999999999999999999998854 5678999999999
Q ss_pred ccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccc
Q 041467 554 QLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628 (746)
Q Consensus 554 ~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~ 628 (746)
++. ...+++..+..++.|++.|++|+|+. +|+||||||+||++++++.+||+|||+++.+...... .
T Consensus 81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~-----~ 152 (257)
T cd05116 81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY-----Y 152 (257)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCe-----e
Confidence 885 35689999999999999999999999 9999999999999999999999999999876432211 0
Q ss_pred cccccccccccccccccccccccccCCCccceeeccceeecccc-cc-cc---------chhhc--cccCCCccHHHHHH
Q 041467 629 SSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-NK---------SILKS--AGIKGKKTVSFFLS 695 (746)
Q Consensus 629 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~~---------~i~~~--~~~~~~~~~~~~~~ 695 (746)
.......++..|+|||.+....++. ++|||||||++|.... .. .. ..... .+.......+.+.+
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 229 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSS---KSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYD 229 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCc---hhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHH
Confidence 1111234467899999987665544 5999999999883221 11 00 00111 11122334456667
Q ss_pred hhCCCCCCCCC-CCCccchhhhccc
Q 041467 696 LLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 696 ~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
++..|+...|+ ||++.++...++.
T Consensus 230 li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 230 LMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHHhccCchhCcCHHHHHHHHhc
Confidence 77777777777 8888877655443
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=259.05 Aligned_cols=174 Identities=24% Similarity=0.322 Sum_probs=149.3
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+|+..+.||+|++|.||+ ||+|.+... .....+.+.+|++++++++||||+++++++...+..+++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 477889999999999997 788887543 234456789999999999999999999999999999999999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
++++++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+|++|||+++.+.....
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~- 156 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN- 156 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccc-
Confidence 9999885 24688999999999999999999998 999999999999999999999999999987643211
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|++.|+|||+..+..++.+ +|||||||+++
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 192 (256)
T cd08529 157 -------FANTIVGTPYYLSPELCEDKPYNEK---SDVWALGVVLY 192 (256)
T ss_pred -------hhhccccCccccCHHHhcCCCCCCc---cchHHHHHHHH
Confidence 1123568899999999988776554 99999999988
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=258.17 Aligned_cols=220 Identities=18% Similarity=0.226 Sum_probs=161.4
Q ss_pred eEeecCCeeEEE-----------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCc
Q 041467 487 KIREGGFNIVYN-----------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQ 554 (746)
Q Consensus 487 ~ig~g~~g~v~~-----------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~ 554 (746)
.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.. +..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 389999999994 7899886543 3334679999999999999999999998864 57789999999998
Q ss_pred cc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccc
Q 041467 555 LR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628 (746)
Q Consensus 555 l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~ 628 (746)
+. ...+++.++.+++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.........
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~----- 152 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY----- 152 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccce-----
Confidence 86 34689999999999999999999999 99999999999999999999999999998653322110
Q ss_pred cccccccccccccccccccccccccCCCccceeeccceeecccc-cc-cc------chh---hc--cccCCCccHHHHHH
Q 041467 629 SSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-NK------SIL---KS--AGIKGKKTVSFFLS 695 (746)
Q Consensus 629 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~~------~i~---~~--~~~~~~~~~~~~~~ 695 (746)
.......++..|+|||++.+..++. ++|||||||++|.... .+ .. .+. .. .........+.+..
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 229 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSS---RSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYA 229 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCc---hhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHH
Confidence 1111223467899999988776654 4999999999883211 11 00 000 00 01111233455666
Q ss_pred hhCCCCCCCCC-CCCccchhhhcc
Q 041467 696 LLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 696 ~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
++..|+...|+ ||+..++...+.
T Consensus 230 li~~c~~~~~~~Rp~~~~i~~~l~ 253 (257)
T cd05115 230 LMKDCWIYKWEDRPNFAKVEERMR 253 (257)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHh
Confidence 77777776776 888876654443
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=264.86 Aligned_cols=177 Identities=20% Similarity=0.292 Sum_probs=152.9
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
...+|+..+.||+|+||.||+ ||+|.+........+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 96 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 96 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence 346789999999999999996 89998875544455678999999999999999999999999999999999
Q ss_pred hccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 549 AISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 549 ~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
|++++++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~--- 170 (297)
T cd06656 97 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--- 170 (297)
T ss_pred ccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc---
Confidence 99999986 45678999999999999999999999 999999999999999999999999999876532211
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|++.|+|||.+.+..++. ++||||+||++|
T Consensus 171 -----~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slGvil~ 206 (297)
T cd06656 171 -----KRSTMVGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAI 206 (297)
T ss_pred -----CcCcccCCccccCHHHHcCCCCCc---HHHHHHHHHHHH
Confidence 112356889999999998776654 499999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=276.35 Aligned_cols=173 Identities=21% Similarity=0.262 Sum_probs=145.6
Q ss_pred hcCCCCCCeEeecCCeeEEE-----------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN-----------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-----------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
..+|+..+.||+|+||.||+ ||+|.+... +.+.+|++++++++|||||++++++......+++|
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 45799999999999999995 677766422 34578999999999999999999999989999999
Q ss_pred hhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 548 KAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 548 e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|++.+.... ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 166 e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~-- 240 (392)
T PHA03207 166 PKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD-- 240 (392)
T ss_pred hhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCcccc--
Confidence 998643332 45689999999999999999999999 999999999999999999999999999976533211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
........||+.|+|||++.+..++.+ +||||+||++|
T Consensus 241 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~---~DvwslGvil~ 278 (392)
T PHA03207 241 ----TPQCYGWSGTLETNSPELLALDPYCAK---TDIWSAGLVLF 278 (392)
T ss_pred ----cccccccccccCccCHhHhcCCCCCch---hhHHHHHHHHH
Confidence 111234679999999999988777554 99999999998
|
|
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-29 Score=265.07 Aligned_cols=174 Identities=20% Similarity=0.278 Sum_probs=148.4
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
++|+..+.||+|+||.||+ ||+|.+.... ....+.+.+|++++++++||||++++++|...+..+++|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 3688899999999999997 6888876432 23345688999999999999999999999999999999999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+++|+|. ...+++..+..++.|+++|++|||+.+ +|+||||||+||++++++.+||+|||+++.+...
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----- 153 (308)
T cd06615 81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----- 153 (308)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc-----
Confidence 9999986 456889999999999999999999732 8999999999999999999999999998764221
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||++.+..++. ++|||||||++|
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~---~~DiwslG~~l~ 189 (308)
T cd06615 154 -----MANSFVGTRSYMSPERLQGTHYTV---QSDIWSLGLSLV 189 (308)
T ss_pred -----ccccCCCCcCccChhHhcCCCCCc---cchHHHHHHHHH
Confidence 112367899999999987776654 599999999988
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=259.86 Aligned_cols=225 Identities=21% Similarity=0.290 Sum_probs=166.3
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.++|+..+.||+|+||.||+ ||+|++.... ...+.+.+|++++++++||||+++++++.. +..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 35688999999999999996 8999886432 234578999999999999999999998754 5688999999
Q ss_pred cCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++|++. ...+++..+..++.|++.|++|+|+. +|+||||||+||++++++.+||+|||.++.+.....
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-- 157 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 157 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccccc--
Confidence 999885 23478999999999999999999999 999999999999999999999999999976532211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchhh----ccc-cCCCccH
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSILK----SAG-IKGKKTV 690 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~~----~~~-~~~~~~~ 690 (746)
.......++..|+|||+..+..++.+ +||||+||++|.... .. ...+.. ... .......
T Consensus 158 -----~~~~~~~~~~~y~~PE~~~~~~~~~~---~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (262)
T cd05071 158 -----TARQGAKFPIKWTAPEAALYGRFTIK---SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 229 (262)
T ss_pred -----ccccCCcccceecCHhHhccCCCCch---hhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccC
Confidence 11112446778999999887776554 999999999883221 10 001110 000 1112333
Q ss_pred HHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 691 SFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 691 ~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
+.+..++..|+...|+ ||+..+...+++
T Consensus 230 ~~l~~li~~~l~~~p~~Rp~~~~~~~~l~ 258 (262)
T cd05071 230 ESLHDLMCQCWRKEPEERPTFEYLQAFLE 258 (262)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 4555666666666666 777776655443
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=258.90 Aligned_cols=175 Identities=24% Similarity=0.360 Sum_probs=145.6
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
.+|+..+.||+|+||.||+ +|+|++.... .....+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 3577889999999999996 7889875322 223468889999999999999999999999999999999999
Q ss_pred CCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 552 NGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 552 ~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
++++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~---- 155 (256)
T cd05059 83 NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY---- 155 (256)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc----
Confidence 99875 23578999999999999999999999 999999999999999999999999999986532111
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|+|||++.+..++.+ +|||||||++|
T Consensus 156 ---~~~~~~~~~~~y~~Pe~~~~~~~~~~---~Di~slG~il~ 192 (256)
T cd05059 156 ---TSSQGTKFPVKWAPPEVFDYSRFSSK---SDVWSFGVLMW 192 (256)
T ss_pred ---cccCCCCCCccccCHHHhccCCCCch---hhHHHHHHHHH
Confidence 01111234568999999988777554 99999999998
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-30 Score=232.53 Aligned_cols=179 Identities=17% Similarity=0.239 Sum_probs=144.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhh-hhhhhHHHHHHHHHhhc-CCCCceeeEEEEEecCCcccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAAEFNALRN-IRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~-~~~~~~~~~~E~~~l~~-l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.++....+.||+|+||.|-+ .|+|.+... ..+..++..+|+.+..+ ...|.+|.+||.....+..++.|
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 34555678999999998754 799988754 24456678889986544 57999999999999999999999
Q ss_pred hhccCCcc--------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 548 KAISNGQL--------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 548 e~~~~g~l--------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
|.|.-..- .....++.-.-+|+..|..|+.|||++- .|+|||+||+|||++.+|++|+||||++..+.++
T Consensus 125 E~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 125 ELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred HHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 99853211 1457899999999999999999999985 8999999999999999999999999999887432
Q ss_pred CCCCCccccccccccccccccccccccccccc-ccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNL-ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~~~~~DiwSlG~i~~ 668 (746)
...+-.+|...|||||.+....- ..|+.++||||+|+.+.
T Consensus 203 ---------iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmi 243 (282)
T KOG0984|consen 203 ---------IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMI 243 (282)
T ss_pred ---------hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhh
Confidence 22223678899999999985432 24577799999999876
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-30 Score=268.01 Aligned_cols=237 Identities=19% Similarity=0.251 Sum_probs=186.7
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
++.-...++....++|-|-||.||. ||||.++... ...++|.+|+.+|+.++|||+|+++|+|.....+|
T Consensus 261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFY 339 (1157)
T KOG4278|consen 261 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFY 339 (1157)
T ss_pred hhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeE
Confidence 3333344566788999999999994 8999987543 34678999999999999999999999999999999
Q ss_pred chhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 545 FDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 545 lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
+|+|||.+|.|- ...++....+.++.||+.|++||..+ .+|||||.++|+|+.++..+||+|||++|.+.
T Consensus 340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMT 416 (1157)
T ss_pred EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhc
Confidence 999999999874 34567778889999999999999999 99999999999999999999999999999985
Q ss_pred CCCCCCCcccccccccccc---cccccccccccccccccCCCccceeeccceeecc--------ccccccchhh---cc-
Q 041467 618 GYEPGTTAETASSSIGING---TVGYVAPVIIAARNLENREKRHTVMSFPQRFALN--------EKKQNKSILK---SA- 682 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~g---t~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~--------~~~~~~~i~~---~~- 682 (746)
++.. +.-+| ..-|.|||-+.-..++.+ +|||+|||++|.. ..-....+++ ..
T Consensus 417 gDTY----------TAHAGAKFPIKWTAPEsLAyNtFSiK---SDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy 483 (1157)
T KOG4278|consen 417 GDTY----------TAHAGAKFPIKWTAPESLAYNTFSIK---SDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY 483 (1157)
T ss_pred CCce----------ecccCccCcccccCcccccccccccc---hhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc
Confidence 5432 12233 356999999988888766 9999999998810 0011111221 11
Q ss_pred -ccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCCCCCCC
Q 041467 683 -GIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPSRSSSS 727 (746)
Q Consensus 683 -~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~~~~~~ 727 (746)
-...+.|.+.+..+|..||.--|. ||+..++++..+.|...++-.
T Consensus 484 RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSis 530 (1157)
T KOG4278|consen 484 RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSIS 530 (1157)
T ss_pred cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcccccc
Confidence 112256778888999999987887 999999988888777655443
|
|
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-29 Score=261.64 Aligned_cols=187 Identities=19% Similarity=0.254 Sum_probs=151.4
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEec
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSS 539 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~ 539 (746)
+.++++....++|+..+.||+|+||.||+ ||+|++... ......+.+|+.+++++ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 44566677889999999999999999996 888987532 22235678899999999 69999999998853
Q ss_pred -----CCcccchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcE
Q 041467 540 -----IDFEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605 (746)
Q Consensus 540 -----~~~~~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 605 (746)
++..++||||+++|+|. ...+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCE
Confidence 34689999999999885 24578899999999999999999999 99999999999999999999
Q ss_pred EEccccccccccCCCCCCCcccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 606 ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
|++|||+++.+..... ......|+..|+|||++.... ...++.++||||+||++|
T Consensus 164 kl~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~ 220 (286)
T cd06638 164 KLVDFGVSAQLTSTRL--------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAI 220 (286)
T ss_pred EEccCCceeecccCCC--------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHH
Confidence 9999999986532211 122356899999999986432 122355699999999988
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-29 Score=259.62 Aligned_cols=176 Identities=22% Similarity=0.347 Sum_probs=148.0
Q ss_pred cCCCCCCeEeecCCeeEEE--------------EEeehhhhhhhh-hhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 480 NNFSPANKIREGGFNIVYN--------------VAMKVANLKQKE-ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
++|+..+.||+|+||.||+ ||+|.+...... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 5788899999999999995 677777544333 4567999999999999999999999999999999
Q ss_pred chhhhccCCccc-----cc---------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccc
Q 041467 545 FDFKAISNGQLR-----LC---------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~---------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~Df 610 (746)
+||||+++|+|. .. .+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 999999999986 12 589999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 611 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+++....... .......++..|+|||.+.+..++. ++|||||||++|
T Consensus 162 ~~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~---~~Di~slG~~l~ 209 (275)
T cd05046 162 SLSKDVYNSEY-------YKLRNALIPLRWLAPEAVQEDDFST---KSDVWSFGVLMW 209 (275)
T ss_pred ccccccCcccc-------cccCCceeEEeecChhhhccCCCCc---hhhHHHHHHHHH
Confidence 99875422111 1122345678899999998776654 599999999988
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=261.62 Aligned_cols=179 Identities=20% Similarity=0.292 Sum_probs=151.6
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|++.+.||.|+||.||+ ||+|++........+.+.+|++++++++||||+++++++......++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 45688899999999999997 899988765555567799999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--- 157 (280)
T cd06611 84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL--- 157 (280)
T ss_pred cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccc---
Confidence 9999885 34689999999999999999999999 99999999999999999999999999987643211
Q ss_pred Cccccccccccccccccccccccccccc--ccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNL--ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~--~~~~~~~DiwSlG~i~~ 668 (746)
.......||..|+|||++....+ ...+.++||||+||++|
T Consensus 158 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~ 199 (280)
T cd06611 158 -----QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLI 199 (280)
T ss_pred -----cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHH
Confidence 11223568999999999864322 22345699999999998
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-29 Score=265.54 Aligned_cols=229 Identities=21% Similarity=0.263 Sum_probs=169.4
Q ss_pred hcCCCCCCeEeecCCeeEEE----------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecC
Q 041467 479 TNNFSPANKIREGGFNIVYN----------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSSI 540 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~----------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~ 540 (746)
.++|.+.+.||+|+||.||+ ||+|.+.... ......+.+|+++++++ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 46789999999999999994 7888776432 33445688999999999 799999999999999
Q ss_pred CcccchhhhccCCccc-----c----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee
Q 041467 541 DFEGFDFKAISNGQLR-----L----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~-----~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl 599 (746)
+..++||||+++|+|. . ..+++.++..++.|++.|++|||+. +++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEE
Confidence 9999999999999875 1 2478899999999999999999998 99999999999999
Q ss_pred CCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-c-c---
Q 041467 600 DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-K-Q--- 674 (746)
Q Consensus 600 ~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~-~--- 674 (746)
++++.+||+|||.++........ .......++..|||||++.+..++. ++||||+||++|.... . .
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwslG~~l~el~~~g~~p~~ 244 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYY------KKTTNGRLPVKWMAPEALFDRIYTH---QSDVWSFGVLLWEIFTLGGSPYP 244 (307)
T ss_pred cCCCcEEECCCcccccccccchh------hccccCCCccceeChHHhccCCCCc---HHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999765321110 1111123457899999998776654 4999999999883211 1 0
Q ss_pred ---ccchh---hccc--cCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 675 ---NKSIL---KSAG--IKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 675 ---~~~i~---~~~~--~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
...++ .... .........+..++..|+...|+ ||++.++...+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~ 298 (307)
T cd05098 245 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 298 (307)
T ss_pred cCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence 00111 1111 11123345556666666666676 8888877655444
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=264.06 Aligned_cols=230 Identities=19% Similarity=0.249 Sum_probs=167.8
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
..+|+..+.||+|+||.||+ ||+|++.... ......+.+|+.++++++||||++++++|... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 35677889999999999996 4788775432 22334688999999999999999999998764 467
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+++||+++|++. ...+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||+++....
T Consensus 85 ~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccccC
Confidence 899999999876 23578999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--ccc---------ccchhhccc--cC
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQ---------NKSILKSAG--IK 685 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~---------~~~i~~~~~--~~ 685 (746)
.... .......++..|+|||++.+..++.+ +|||||||++|... ... ...+..... ..
T Consensus 162 ~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~---~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd05110 162 DEKE------YNADGGKMPIKWMALECIHYRKFTHQ---SDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQ 232 (303)
T ss_pred cccc------cccCCCccccccCCHHHhccCCCChH---HHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCC
Confidence 2211 11122445778999999987766554 99999999988321 110 011111111 11
Q ss_pred CCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 686 GKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
.......+..++..|+...|. ||++.+....+..+.
T Consensus 233 ~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 233 PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 112234455666667766777 888887665555443
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=257.86 Aligned_cols=180 Identities=21% Similarity=0.328 Sum_probs=148.1
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.+++.+.....||+|+||.||+ ||+|.+........+.+.+|++++++++||||+++++++...+..++++
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 3455555667999999999996 8899877655556678999999999999999999999999999999999
Q ss_pred hhccCCccc------ccCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-CCcEEEccccccccccC
Q 041467 548 KAISNGQLR------LCNL--SLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-DVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 548 e~~~~g~l~------~~~l--~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DfGla~~~~~ 618 (746)
||+++++|. ...+ ++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||++..+..
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~ 161 (268)
T cd06624 85 EQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG 161 (268)
T ss_pred ecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence 999999986 1334 7888999999999999999999 9999999999999986 67999999999876532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ......|+..|+|||++.+.... .+.++||||+||++|
T Consensus 162 ~~~--------~~~~~~~~~~~~aPE~~~~~~~~-~~~~~Dv~slGvvl~ 202 (268)
T cd06624 162 INP--------CTETFTGTLQYMAPEVIDKGPRG-YGAPADIWSLGCTIV 202 (268)
T ss_pred CCC--------ccccCCCCccccChhhhcccccc-CCchhhhHHHHHHHH
Confidence 211 11224578999999998764321 234699999999998
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=261.32 Aligned_cols=180 Identities=19% Similarity=0.260 Sum_probs=147.4
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecC------
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSI------ 540 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~------ 540 (746)
.+.+.|+..+.||+|+||.||+ ||+|++.... .....+.+|+.+++++ +||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 4567788999999999999996 7999876432 2345688999999998 699999999998763
Q ss_pred CcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 541 DFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
...+++|||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCc
Confidence 3578999999999886 23588999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
+...... .......|+..|+|||++.+.. ...++.++||||+||++|
T Consensus 159 ~~~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~ 207 (272)
T cd06637 159 AQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAI 207 (272)
T ss_pred eeccccc--------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHH
Confidence 7653211 1123367899999999987432 122355699999999998
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=257.54 Aligned_cols=175 Identities=24% Similarity=0.365 Sum_probs=144.6
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.++|++.+.||+|+||.||+ ||+|.+..... ..+.+.+|+.++++++||||+++++++. ....+++|||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 45788899999999999996 78888764322 3456899999999999999999999875 45688999999
Q ss_pred cCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++..+.....
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccc--
Confidence 999885 23479999999999999999999999 999999999999999999999999999986532211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|+|||++.+..++. ++|||||||++|
T Consensus 158 -----~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~~l~ 194 (260)
T cd05070 158 -----TARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILLT 194 (260)
T ss_pred -----ccccCCCCCccccChHHHhcCCCcc---hhhhHHHHHHHH
Confidence 0111234567899999988776654 499999999998
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-29 Score=263.37 Aligned_cols=175 Identities=18% Similarity=0.296 Sum_probs=151.8
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.+|+..+.||.|+||.||+ ||+|.+........+.+.+|+++++.++||||+++++++...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688999999999999996 8999886555445667899999999999999999999999999999999999
Q ss_pred cCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcc
Q 041467 551 SNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626 (746)
Q Consensus 551 ~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~ 626 (746)
++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~----- 170 (296)
T cd06655 99 AGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS----- 170 (296)
T ss_pred CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc-----
Confidence 999986 44689999999999999999999999 999999999999999999999999999886533211
Q ss_pred cccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 627 TASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 627 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||.+.+..++. ++|||||||++|
T Consensus 171 ---~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slGvil~ 206 (296)
T cd06655 171 ---KRSTMVGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAI 206 (296)
T ss_pred ---cCCCcCCCccccCcchhcCCCCCc---hhhHHHHHHHHH
Confidence 112356889999999998776654 499999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-29 Score=255.30 Aligned_cols=171 Identities=25% Similarity=0.323 Sum_probs=143.4
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec-CCcccchhhhc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS-IDFEGFDFKAI 550 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~~lv~e~~ 550 (746)
..+|+..+.||+|+||.||+ ||+|..... ...+.+.+|+.++++++||||+++++++.. .+..++++||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 35788899999999999997 788987532 234578999999999999999999997654 45789999999
Q ss_pred cCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++|++. ...+++..+..++.|++.|++|||++ +|+||||||+||++++++.+|++|||+++......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 999885 12478999999999999999999999 99999999999999999999999999987642211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....++..|+|||++.+..++.+ +|||||||++|
T Consensus 157 --------~~~~~~~~y~aPE~~~~~~~~~~---~Dv~slG~i~~ 190 (256)
T cd05082 157 --------DTGKLPVKWTAPEALREKKFSTK---SDVWSFGILLW 190 (256)
T ss_pred --------CCCccceeecCHHHHccCCCCch---hhhHHHHHHHH
Confidence 11334668999999987766554 99999999988
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=265.64 Aligned_cols=174 Identities=22% Similarity=0.298 Sum_probs=148.7
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
.|.....||+|+||.||+ ||||.+........+.+.+|+.++++++||||+++++.+...+..++||||++
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 102 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE 102 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence 344456799999999996 89998866555556678999999999999999999999999999999999999
Q ss_pred CCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 552 NGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 552 ~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
++++. ...+++.++..++.||+.|++|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 103 ~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~------ 173 (292)
T cd06658 103 GGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP------ 173 (292)
T ss_pred CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc------
Confidence 99885 45689999999999999999999999 999999999999999999999999999876532211
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||++.+..++. ++||||+||++|
T Consensus 174 --~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slGvil~ 209 (292)
T cd06658 174 --KRKSLVGTPYWMAPEVISRLPYGT---EVDIWSLGIMVI 209 (292)
T ss_pred --cCceeecCccccCHHHHccCCCCc---hhhHHHHHHHHH
Confidence 112356899999999998776654 599999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=256.33 Aligned_cols=165 Identities=22% Similarity=0.353 Sum_probs=136.0
Q ss_pred CeEeecCCeeEEE-------------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 486 NKIREGGFNIVYN-------------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 486 ~~ig~g~~g~v~~-------------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
+.||+|+||.||+ ||+|++...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 4689999999995 355554433222 5678999999999999999999999988 778999
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC-------cEEEcccccc
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV-------VTHVGDLGLA 613 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~-------~~ki~DfGla 613 (746)
|||+++|++. ...+++..+..++.||+.|++|||++ +|+||||||+||+++.++ .+|++|||++
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 9999999986 22689999999999999999999999 999999999999999887 7999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.... .....++..|+|||++.+.. ...+.++||||+||++|
T Consensus 156 ~~~~~------------~~~~~~~~~y~aPE~~~~~~-~~~~~~~Di~slG~~~~ 197 (259)
T cd05037 156 ITVLS------------REERVERIPWIAPECIRNGQ-ASLTIAADKWSFGTTLL 197 (259)
T ss_pred ccccc------------ccccccCCCccChhhhcCCC-CCcchhhHHHHHHHHHH
Confidence 86532 11245677899999998762 11244599999999988
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=260.82 Aligned_cols=178 Identities=24% Similarity=0.369 Sum_probs=147.0
Q ss_pred hcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 46788999999999999996 6788776432 23456789999999999999999999999999999
Q ss_pred cchhhhccCCccc-----c----------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCC
Q 041467 544 GFDFKAISNGQLR-----L----------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSN 596 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~----------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~N 596 (746)
+++|||+++|++. . ..+++.++..++.|++.|++|||+. +++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence 9999999998874 0 1367888999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 597 ILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 597 ILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|++++++.+||+|||+++.+...... .......++..|+|||++.+..++.+ +|||||||++|
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Dv~slG~il~ 223 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYY------KASENDAIPIRWMPPESIFYNRYTTE---SDVWAYGVVLW 223 (288)
T ss_pred eEecCCCceEECccccceecccCccc------cccCCCccChhhcCHHHHhcCCCCch---hHHHHHHHHHH
Confidence 99999999999999998765332210 01112334677999999987776554 99999999988
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-29 Score=256.83 Aligned_cols=180 Identities=21% Similarity=0.348 Sum_probs=148.8
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh---------hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ---------KEASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---------~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
+|.....||+|++|.||+ ||+|.+.... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 367788999999999996 8899775321 1233568899999999999999999999999999
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
.+++|||++++++. ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 99999999999885 45688999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....... .........|+..|+|||.+.+..++. ++||||+||++|
T Consensus 158 ~~~~~~~--~~~~~~~~~~~~~y~~pe~~~~~~~~~---~~Dv~slG~il~ 203 (267)
T cd06628 158 ANSLSTK--TNGARPSLQGSVFWMAPEVVKQTSYTR---KADIWSLGCLVV 203 (267)
T ss_pred cccccCC--ccccccccCCCcCccChhHhccCCCCc---hhhhHHHHHHHH
Confidence 3221110 011122356889999999998776654 499999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-29 Score=265.62 Aligned_cols=232 Identities=21% Similarity=0.263 Sum_probs=168.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE----------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEec
Q 041467 478 ATNNFSPANKIREGGFNIVYN----------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSS 539 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~----------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~ 539 (746)
..++|...+.||+|+||.||+ ||+|++.... ......+.+|+++++++ +||||++++++|..
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 346788899999999999995 6888876432 33456788999999999 59999999999999
Q ss_pred CCcccchhhhccCCccc----c-----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCee
Q 041467 540 IDFEGFDFKAISNGQLR----L-----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~----~-----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NIL 598 (746)
.+..+++|||+++|++. . ..+++.++..++.|++.|++|||+. +|+||||||+||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil 166 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVL 166 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEE
Confidence 88999999999999875 1 2478899999999999999999999 9999999999999
Q ss_pred eCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc--cc--
Q 041467 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQ-- 674 (746)
Q Consensus 599 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~-- 674 (746)
+++++.+|++|||+++........ .......++..|||||++.+..++. ++|||||||++|.... ..
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~---~~DiwslG~~l~el~~~g~~p~ 237 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYY------KKTSNGRLPVKWMAPEALFDRVYTH---QSDVWSFGILMWEIFTLGGSPY 237 (314)
T ss_pred EcCCCcEEEccccccccccccccc------cccccCCCCccccCHHHHccCCcCc---cchhhHHHHHHHHHHhCCCCCC
Confidence 999999999999999865322111 0011123456799999998776654 4999999999882211 00
Q ss_pred ----ccchhh---cc--ccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 675 ----NKSILK---SA--GIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 675 ----~~~i~~---~~--~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
...++. .. ..........+..++..|+...|+ ||+..++...+.++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 238 PGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred CCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 001111 00 011122233444555555555566 888777666555443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=269.69 Aligned_cols=178 Identities=23% Similarity=0.304 Sum_probs=144.3
Q ss_pred hcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCC-
Q 041467 479 TNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSSID- 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~- 541 (746)
.++|+..+.||+|+||.||+ ||||+++... ....+.+.+|+.+++++ +|||||+++++|...+
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 46799999999999999994 7999886432 23345788999999999 6899999999887644
Q ss_pred cccchhhhccCCccc----c------------------------------------------------------------
Q 041467 542 FEGFDFKAISNGQLR----L------------------------------------------------------------ 557 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~----~------------------------------------------------------------ 557 (746)
..+++|||+++|+|. .
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 678999999998874 0
Q ss_pred --------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccccc
Q 041467 558 --------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETAS 629 (746)
Q Consensus 558 --------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~ 629 (746)
..+++.++..++.|+++|++|||++ +|+||||||+||++++++.+||+|||+++........ .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------~ 236 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------V 236 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcch------h
Confidence 1367888899999999999999999 9999999999999999999999999999865322111 1
Q ss_pred ccccccccccccccccccccccccCCCccceeeccceee
Q 041467 630 SSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 630 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......++..|+|||++.+..++.+ +|||||||++|
T Consensus 237 ~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 272 (343)
T cd05103 237 RKGDARLPLKWMAPETIFDRVYTIQ---SDVWSFGVLLW 272 (343)
T ss_pred hcCCCCCCcceECcHHhcCCCCCch---hhHHHHHHHHH
Confidence 1112345678999999987766554 99999999988
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-29 Score=259.23 Aligned_cols=178 Identities=20% Similarity=0.279 Sum_probs=144.8
Q ss_pred hcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.++|...+.||+|+||.||+ ||+|.+.... ......+.+|+.++++++||||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 46788899999999999995 5777665332 23345689999999999999999999999999999
Q ss_pred cchhhhccCCcccc------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC---cEEEc
Q 041467 544 GFDFKAISNGQLRL------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV---VTHVG 608 (746)
Q Consensus 544 ~lv~e~~~~g~l~~------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~---~~ki~ 608 (746)
+++|||+++|++.. ..+++.++..++.||+.|++|||+. +++||||||+||+++.++ .+|++
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEec
Confidence 99999999998861 2588999999999999999999999 999999999999998654 69999
Q ss_pred cccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 609 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|||+++.+...... .......++..|+|||++.+..++.+ +|||||||++|
T Consensus 162 dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~DiwslG~il~ 212 (277)
T cd05036 162 DFGMARDIYRASYY------RKGGRAMLPIKWMPPEAFLDGIFTSK---TDVWSFGVLLW 212 (277)
T ss_pred cCccccccCCccce------ecCCCCCccHhhCCHHHHhcCCcCch---hHHHHHHHHHH
Confidence 99999876322110 00111233568999999988777554 99999999988
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-29 Score=255.63 Aligned_cols=172 Identities=26% Similarity=0.376 Sum_probs=148.4
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
.++|+..+.||.|+||.||+ ||||.+..... ..+++.+|+.++++++||||+++++++...+..++||||++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhhccceeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 45788899999999999996 89999875543 46679999999999999999999999999889999999999
Q ss_pred CCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 552 NGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 552 ~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
++++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.......
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~--- 157 (256)
T cd05039 84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD--- 157 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc---
Confidence 99886 12689999999999999999999999 999999999999999999999999999987522111
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...++..|+|||++.+..++. ++||||+||++|
T Consensus 158 --------~~~~~~~~~ape~~~~~~~~~---~~Di~slG~il~ 190 (256)
T cd05039 158 --------SGKLPVKWTAPEALREKKFST---KSDVWSFGILLW 190 (256)
T ss_pred --------cCCCcccccCchhhcCCcCCc---HHHHHHHHHHHH
Confidence 123456899999998776654 499999999987
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=254.69 Aligned_cols=178 Identities=20% Similarity=0.304 Sum_probs=146.7
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh-----hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ-----KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFE 543 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-----~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~ 543 (746)
.+|+..+.||+|+||.||+ ||+|++.... .+..+.+.+|+.++++++||||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688899999999999997 8899875321 23345788999999999999999999988763 467
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
++++||++++++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 8999999999885 34688999999999999999999998 999999999999999999999999999986532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... ........|+..|+|||++.+..++. ++||||+||++|
T Consensus 159 ~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slG~i~~ 200 (266)
T cd06651 159 ICMS-----GTGIRSVTGTPYWMSPEVISGEGYGR---KADVWSLGCTVV 200 (266)
T ss_pred cccc-----CCccccCCccccccCHHHhCCCCCCc---hhhhHHHHHHHH
Confidence 1111 01112356889999999998776654 499999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-29 Score=256.11 Aligned_cols=180 Identities=18% Similarity=0.315 Sum_probs=149.6
Q ss_pred CCCCCCeEeecCCeeEEE--------EEeehhhhhh------hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 481 NFSPANKIREGGFNIVYN--------VAMKVANLKQ------KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~--------vavK~~~~~~------~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
+|+..+.||+|+||.||+ ||||.+.... ....+.+.+|++++++++||||+++++++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 477889999999999997 7899875331 22345688999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
+||+++|++. ...+++..+..++.|++.|++|||+. +|+|+||||+||++++++.+||+|||+++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 9999999886 35688999999999999999999999 999999999999999999999999999986532211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... .........|+..|+|||++.+..++. ++||||+||++|
T Consensus 158 ~~~--~~~~~~~~~~~~~~~~pe~~~~~~~~~---~~Dv~slG~~~~ 199 (265)
T cd06631 158 HGT--HSNMLKSMHGTPYWMAPEVINESGYGR---KSDIWSIGCTVF 199 (265)
T ss_pred ccc--ccccccccCCCccccChhhhcCCCCcc---hhhHHHHHHHHH
Confidence 110 111122356899999999998776654 499999999998
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-29 Score=258.36 Aligned_cols=177 Identities=23% Similarity=0.324 Sum_probs=146.0
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
..+|+..+.||+|+||.||+ ||+|+..... ......+.+|+.++++++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 35678889999999999996 5777765443 3345678999999999999999999999987 7889
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
++|||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 85 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 999999999886 23588999999999999999999998 999999999999999999999999999987642
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .......++..|+|||.+....++. ++|||||||++|
T Consensus 162 ~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~---~~Di~slG~~l~ 202 (279)
T cd05057 162 DEKE------YHAEGGKVPIKWMALESILHRIYTH---KSDVWSYGVTVW 202 (279)
T ss_pred cccc------eecCCCcccccccCHHHhhcCCcCc---hhhHHHHHHHHH
Confidence 2111 1111223456899999987766654 499999999988
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-29 Score=257.04 Aligned_cols=175 Identities=23% Similarity=0.373 Sum_probs=149.5
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||+|.++.. .....+.+.+|++++++++||||+++++++...+..+++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 5789999999999999997 789977532 2333567899999999999999999999999999999999
Q ss_pred hhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 548 KAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 548 e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
||+++|++. ...+++.++..++.|+++|++|||+. +|+||||||+||+++.++.++++|||+++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999885 23478999999999999999999999 999999999999999999999999999876532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ......|+..|+|||.+.+..++.+ +||||+||++|
T Consensus 159 ~~~--------~~~~~~~~~~y~apE~~~~~~~~~~---~Di~slG~il~ 197 (267)
T cd08224 159 KTT--------AAHSLVGTPYYMSPERIHENGYNFK---SDIWSLGCLLY 197 (267)
T ss_pred CCc--------ccceecCCccccCHHHhccCCCCch---hcHHHHHHHHH
Confidence 211 1123568899999999987776554 99999999988
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-29 Score=256.46 Aligned_cols=179 Identities=21% Similarity=0.284 Sum_probs=151.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|+..+.+|+|+||.||+ +|+|++........+.+.+|++++++++||||+++++++.+.+..+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 35788899999999999996 788988765555567899999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++++++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 155 (262)
T cd06613 82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--- 155 (262)
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhh---
Confidence 9998886 25789999999999999999999999 99999999999999999999999999997653211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......|+..|+|||++.+......+.++||||+||++|
T Consensus 156 -----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~ 195 (262)
T cd06613 156 -----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAI 195 (262)
T ss_pred -----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHH
Confidence 1122356889999999997762122234599999999988
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=252.47 Aligned_cols=216 Identities=19% Similarity=0.238 Sum_probs=159.8
Q ss_pred CeEeecCCeeEEE--------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCccc
Q 041467 486 NKIREGGFNIVYN--------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR 556 (746)
Q Consensus 486 ~~ig~g~~g~v~~--------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~ 556 (746)
+.||+|+||.||+ ||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|++.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 4689999999996 8999876443 233456889999999999999999999999999999999999999875
Q ss_pred ------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccc
Q 041467 557 ------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630 (746)
Q Consensus 557 ------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~ 630 (746)
...+++.++..++.|++.|+.|+|+. +++||||||+||++++++.+|++|||+++........ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-------~ 150 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-------S 150 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccc-------c
Confidence 23578999999999999999999999 9999999999999999999999999998754321110 0
Q ss_pred cccccccccccccccccccccccCCCccceeeccceeecccc-cc-c------cc----hhhc-cccCCCccHHHHHHhh
Q 041467 631 SIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N------KS----ILKS-AGIKGKKTVSFFLSLL 697 (746)
Q Consensus 631 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~------~~----i~~~-~~~~~~~~~~~~~~~~ 697 (746)
.....++..|+|||++.+..++.+ +|||||||++|.... .. . .. +... ...........+..++
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 227 (250)
T cd05085 151 SGLKQIPIKWTAPEALNYGRYSSE---SDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVM 227 (250)
T ss_pred CCCCCCcccccCHHHhccCCCCch---hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 111234678999999987766554 999999999882211 10 0 00 0000 0011123335556666
Q ss_pred CCCCCCCCC-CCCccchh
Q 041467 698 SPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 698 ~~~~~~~p~-~p~~~~~~ 714 (746)
.+|+...|+ ||++.++.
T Consensus 228 ~~~l~~~p~~Rp~~~~l~ 245 (250)
T cd05085 228 QRCWDYKPENRPKFSELQ 245 (250)
T ss_pred HHHcccCcccCCCHHHHH
Confidence 666666666 77777554
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-29 Score=256.31 Aligned_cols=173 Identities=20% Similarity=0.268 Sum_probs=137.0
Q ss_pred eEeecCCeeEEE-----------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCc
Q 041467 487 KIREGGFNIVYN-----------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQ 554 (746)
Q Consensus 487 ~ig~g~~g~v~~-----------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~ 554 (746)
.||+|+||.||+ +++|.+.... ....+.+.+|+.+++.++||||++++++|......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999996 3455544322 2345679999999999999999999999999999999999999999
Q ss_pred cc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 555 LR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 555 l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
|. ....++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 86 12356677889999999999999999 999999999999999999999999999864321110
Q ss_pred cccccccccccccccccccccccccc----ccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNL----ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~----~~~~~~~DiwSlG~i~~ 668 (746)
........|+..|+|||++..... ...+.++|||||||++|
T Consensus 155 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~ 199 (268)
T cd05086 155 --IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLW 199 (268)
T ss_pred --hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHH
Confidence 011123567899999999864211 12255799999999988
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.1e-29 Score=257.16 Aligned_cols=217 Identities=22% Similarity=0.266 Sum_probs=157.1
Q ss_pred CeEeecCCeeEEE-----------EEeehhhhh-hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN-----------VAMKVANLK-QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~-----------vavK~~~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ +|+|.+... .....+.+.+|+++++++ +||||+++++++...+..+++|||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 3689999999996 477776532 233456789999999999 799999999999999999999999999
Q ss_pred Cccc-----c----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 553 GQLR-----L----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 553 g~l~-----~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
|++. . ..+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 9875 1 1378899999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c------cchhhc--
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N------KSILKS-- 681 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~------~~i~~~-- 681 (746)
+++...... .......+..|+|||++....++. ++|||||||++|.... .+ . ...+..
T Consensus 158 l~~~~~~~~---------~~~~~~~~~~y~apE~~~~~~~~~---~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~ 225 (270)
T cd05047 158 LSRGQEVYV---------KKTMGRLPVRWMAIESLNYSVYTT---NSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 225 (270)
T ss_pred Cccccchhh---------hccCCCCccccCChHHHccCCCCc---hhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHh
Confidence 986321100 011123356799999997766654 5999999999883211 11 0 001110
Q ss_pred ---cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 682 ---AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 682 ---~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
...........+..++..|+...|. ||+..++...+
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 265 (270)
T cd05047 226 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 265 (270)
T ss_pred CCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHH
Confidence 0001112234455566666666666 77777665443
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-29 Score=254.22 Aligned_cols=174 Identities=19% Similarity=0.255 Sum_probs=148.9
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+|+..+.||.|+||.||. ||+|.+... .....+.+.+|++++++++||||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 588899999999998874 889987643 234456788999999999999999999999999999999999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
+++|++. ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 9999886 23578999999999999999999998 999999999999999999999999999986533221
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|++.|+|||++.+..++. ++||||+||++|
T Consensus 157 -------~~~~~~~~~~y~ape~~~~~~~~~---~~Dv~slG~i~~ 192 (256)
T cd08221 157 -------MAETVVGTPYYMSPELCQGVKYNF---KSDIWALGCVLY 192 (256)
T ss_pred -------cccccCCCccccCHhhcCCCCCCC---cchhHHHHHHHH
Confidence 122356899999999998776654 499999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=257.23 Aligned_cols=177 Identities=17% Similarity=0.266 Sum_probs=141.6
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHH-hhcCCCCceeeEEEEEecCCcccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNA-LRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~-l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
++|+..+.||+|+||.||+ ||||++.... ......+.+|+.+ ++..+|||||++++++...+..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 3688899999999999997 8999876432 2223445566664 677789999999999999999999999
Q ss_pred hccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 549 AISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 549 ~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
|+++ ++. ...+++..+..++.||+.|++|||+++ +++||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9974 432 235899999999999999999999854 7999999999999999999999999999865321
Q ss_pred CCCCCccccccccccccccccccccccccccc-ccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNL-ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~~~~~DiwSlG~i~~ 668 (746)
. ......|+..|+|||++.+... ..++.++||||+||++|
T Consensus 158 ~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~ 198 (283)
T cd06617 158 V---------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMI 198 (283)
T ss_pred c---------ccccccCCccccChhhcCCcccccccCccccchhhHHHHH
Confidence 1 1122468899999999875332 33355699999999998
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-29 Score=255.07 Aligned_cols=218 Identities=20% Similarity=0.266 Sum_probs=163.9
Q ss_pred CeEeecCCeeEEE------------EEeehhhhhhh-hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN------------VAMKVANLKQK-EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~------------vavK~~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|++|.||+ ||||++..... ...+.+.+|++++++++||||+++++++.. ...++++||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 4689999999995 68998876544 566789999999999999999999999988 889999999999
Q ss_pred Cccc------c-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 553 GQLR------L-CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 553 g~l~------~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
|++. . ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.+.......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~-- 154 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY-- 154 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccce--
Confidence 9886 1 3579999999999999999999999 99999999999999999999999999998764322110
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceeecccc--ccc------cchhh----c--cccCCCccHH
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQN------KSILK----S--AGIKGKKTVS 691 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~~------~~i~~----~--~~~~~~~~~~ 691 (746)
.......++..|+|||++.+..++.+ +|||||||++|.... ... ..+.. . ..........
T Consensus 155 ---~~~~~~~~~~~y~~pE~~~~~~~~~~---~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (257)
T cd05040 155 ---VMEEHLKVPFAWCAPESLRTRTFSHA---SDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQ 228 (257)
T ss_pred ---ecccCCCCCceecCHHHhcccCcCch---hhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCH
Confidence 11113557889999999987776554 999999999983221 110 01110 0 0011122334
Q ss_pred HHHHhhCCCCCCCCC-CCCccchhh
Q 041467 692 FFLSLLSPSCSVFPL-TPSSNSFTL 715 (746)
Q Consensus 692 ~~~~~~~~~~~~~p~-~p~~~~~~~ 715 (746)
.+.+++..|+...|+ ||+..++..
T Consensus 229 ~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 229 DIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHHHHHCCCCcccCCCHHHHHH
Confidence 555666666666666 777765543
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=260.11 Aligned_cols=183 Identities=20% Similarity=0.256 Sum_probs=148.6
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||+|.+.... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 3688899999999999995 8999876543 233457889999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence 999999886 45689999999999999999999999 9999999999999999999999999998742111000
Q ss_pred C-------CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 T-------TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~-------~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ............|+..|+|||.+....++. ++|||||||++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~vl~ 207 (305)
T cd05609 158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGK---PVDWWAMGIILY 207 (305)
T ss_pred cccccccccchhhccccCCccCccccCchhccCCCCCc---hhhHHHHHHHHH
Confidence 0 000001112346788999999988776654 499999999998
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=258.51 Aligned_cols=172 Identities=25% Similarity=0.312 Sum_probs=149.4
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 3688899999999999996 8999876432 234567889999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~--- 154 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR--- 154 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---
Confidence 999999885 45689999999999999999999998 9999999999999999999999999999875322
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....|++.|+|||.+.+...+. ++||||+||++|
T Consensus 155 --------~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 189 (290)
T cd05580 155 --------TYTLCGTPEYLAPEIILSKGYGK---AVDWWALGILIY 189 (290)
T ss_pred --------CCCCCCCccccChhhhcCCCCCc---cccHHHHHHHHH
Confidence 12356899999999998775544 599999999988
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.5e-29 Score=265.25 Aligned_cols=231 Identities=21% Similarity=0.253 Sum_probs=170.1
Q ss_pred hcCCCCCCeEeecCCeeEEE----------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecC
Q 041467 479 TNNFSPANKIREGGFNIVYN----------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSSI 540 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~----------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~ 540 (746)
..+|++.+.||+|+||.||+ ||+|++.... ....+.+.+|+++++++ +||||++++++|...
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 34688899999999999994 5888776432 33456789999999999 799999999999999
Q ss_pred CcccchhhhccCCcccc---------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee
Q 041467 541 DFEGFDFKAISNGQLRL---------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~~---------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl 599 (746)
+..++++||+++|+|.. ..+++.++..++.|++.|++|||+. +|+||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEE
Confidence 99999999999998751 2367889999999999999999999 99999999999999
Q ss_pred CCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-c-c---
Q 041467 600 DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-K-Q--- 674 (746)
Q Consensus 600 ~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~-~--- 674 (746)
++++.+||+|||+++........ .......++..|||||++.+..++.+ +|||||||++|.... . .
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~el~~~g~~p~~ 238 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQ---SDVWSFGVLLWEIFTLGGSPYP 238 (334)
T ss_pred cCCCcEEECCcccceeccccccc------ccccCCCcCceEcCHHHhccCCcCch---hhhHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999865332110 11112334568999999988776554 999999999883211 1 0
Q ss_pred ---ccchhh---c--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 675 ---NKSILK---S--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 675 ---~~~i~~---~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
...++. . ...........+..++..|+...|. ||++.+....+.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 239 GIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 011111 0 1111122334455566666666666 888887666555543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-29 Score=258.47 Aligned_cols=173 Identities=27% Similarity=0.416 Sum_probs=147.2
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhhhhh--hHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQKEA--SRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~--~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
|+..+.||+|+||.||+ ||+|++....... .....+|+.++++++||||+++++++......+++||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 56788999999999997 8999987654322 223466999999999999999999999999999999999
Q ss_pred cCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 551 SNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 551 ~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
.++++. ...+++.++..++.|+++||+|||+. +|+||||||+||++++++.++|+|||.+.....
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~------- 150 (260)
T PF00069_consen 81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSE------- 150 (260)
T ss_dssp TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTS-------
T ss_pred ccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc-------
Confidence 998885 56789999999999999999999999 999999999999999999999999999976411
Q ss_pred cccccccccccccccccccccc-ccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIA-ARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.........||..|+|||++. +..++. ++||||+||+++
T Consensus 151 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~~Di~slG~il~ 190 (260)
T PF00069_consen 151 -NNENFNPFVGTPEYMAPEVLQQGKKYTR---KSDIWSLGIILY 190 (260)
T ss_dssp -TTSEBSSSSSSGGGSCHHHHTTTSSBST---HHHHHHHHHHHH
T ss_pred -cccccccccccccccccccccccccccc---cccccccccccc
Confidence 112233467899999999988 555544 599999999988
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-28 Score=253.00 Aligned_cols=222 Identities=17% Similarity=0.243 Sum_probs=161.2
Q ss_pred CeEeecCCeeEEE------------EEeehhhhhhh-hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN------------VAMKVANLKQK-EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~------------vavK~~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||+|.+..... ...+.+.+|++++++++|||||++++++.. +..+++|||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence 4689999999985 78888764432 345678999999999999999999998764 567899999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~----- 151 (257)
T cd05060 80 GPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY----- 151 (257)
T ss_pred CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc-----
Confidence 9886 34589999999999999999999999 9999999999999999999999999999876432211
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceeecccc-ccc-------cchhh----ccc-cCCCccHHHHH
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQN-------KSILK----SAG-IKGKKTVSFFL 694 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~~-------~~i~~----~~~-~~~~~~~~~~~ 694 (746)
........++..|+|||.+.+..++.+ +|||||||++|.... ... ..+.. ... .......+.+.
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 228 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSK---SDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIY 228 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCcc---chHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHH
Confidence 011111234568999999987776554 999999999882211 110 00100 000 11122334555
Q ss_pred HhhCCCCCCCCC-CCCccchhhhccc
Q 041467 695 SLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 695 ~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
+++..|+...|. ||+..++...+..
T Consensus 229 ~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 229 SIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred HHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 566666666666 7777766655443
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=254.03 Aligned_cols=223 Identities=19% Similarity=0.255 Sum_probs=164.1
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
++|+..+.||+|++|.||+ ||+|.+.... ...+.+.+|++++++++||||+++++++. .+..+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 5688889999999999996 7888775332 23456889999999999999999999875 456889999999
Q ss_pred CCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 552 NGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 552 ~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+|++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~--- 157 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY--- 157 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcc---
Confidence 99875 23478999999999999999999999 999999999999999999999999999976532211
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceeecccc-ccc-------cch---hhcc--ccCCCccHH
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQN-------KSI---LKSA--GIKGKKTVS 691 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~~-------~~i---~~~~--~~~~~~~~~ 691 (746)
.......++..|+|||+..+..++. ++||||+||++|.... ... ... .... .........
T Consensus 158 ----~~~~~~~~~~~y~~Pe~~~~~~~~~---~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (260)
T cd05069 158 ----TARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPE 230 (260)
T ss_pred ----cccCCCccchhhCCHHHhccCCcCh---HHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCH
Confidence 1111234677899999988776654 4999999999983221 110 000 0000 011122334
Q ss_pred HHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 692 FFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 692 ~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
.+..++..|+...|. ||++.++..++
T Consensus 231 ~~~~li~~~l~~~p~~Rp~~~~i~~~l 257 (260)
T cd05069 231 SLHELMKLCWKKDPDERPTFEYIQSFL 257 (260)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 555666666666666 77777665544
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=261.92 Aligned_cols=172 Identities=22% Similarity=0.259 Sum_probs=136.2
Q ss_pred CCeEeecCCeeEEE-----------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec--CCcccchhhhcc
Q 041467 485 ANKIREGGFNIVYN-----------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS--IDFEGFDFKAIS 551 (746)
Q Consensus 485 ~~~ig~g~~g~v~~-----------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~~~lv~e~~~ 551 (746)
...||+|+||.||+ ||+|.+... .....+.+|++++++++||||+++++++.. ....+++|||+.
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 46899999999996 788877532 223467899999999999999999999864 446789999987
Q ss_pred CCccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee----CCCCcEEEccccccc
Q 041467 552 NGQLR-------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL----DQDVVTHVGDLGLAK 614 (746)
Q Consensus 552 ~g~l~-------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl----~~~~~~ki~DfGla~ 614 (746)
++... ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+|+
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 54221 22478899999999999999999999 99999999999999 566899999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
........ ........||+.|+|||++.+... ++.++||||+||++|
T Consensus 161 ~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwSlG~il~ 207 (317)
T cd07867 161 LFNSPLKP-----LADLDPVVVTFWYRAPELLLGARH--YTKAIDIWAIGCIFA 207 (317)
T ss_pred ccCCCccc-----ccccCcceecccccCcHHhcCCCc--cCcHHHHHhHHHHHH
Confidence 76432211 112234678999999999976432 234599999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=253.03 Aligned_cols=174 Identities=22% Similarity=0.317 Sum_probs=146.2
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-cccchhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSID-FEGFDFK 548 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~-~~~lv~e 548 (746)
+|+..+.||+|++|.||+ ||+|++.... ....+.+.+|++++++++||||+++++.+...+ ..+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 478899999999999995 8999886432 234556889999999999999999999876544 5789999
Q ss_pred hccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 549 AISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 549 ~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|++++++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 99999875 23589999999999999999999999 999999999999999999999999999987632211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|++.|+|||++.+..++.+ +||||+||+++
T Consensus 158 --------~~~~~~~~~~y~aPE~~~~~~~~~~---~Dv~slG~il~ 193 (257)
T cd08223 158 --------MASTLIGTPYYMSPELFSNKPYNYK---SDVWALGCCVY 193 (257)
T ss_pred --------ccccccCCcCccChhHhcCCCCCch---hhhHHHHHHHH
Confidence 1223568999999999988766554 99999999988
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-30 Score=237.87 Aligned_cols=174 Identities=18% Similarity=0.299 Sum_probs=147.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCC--cccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSID--FEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~--~~~l 545 (746)
..++|++.+.+|+|.|++||. +.||+++.- ..+...||+.+++.+. |||||+++++..+.. ...+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 456899999999999999994 889988633 3456899999999998 999999999988865 5679
Q ss_pred hhhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-CCcEEEccccccccccCCCCC
Q 041467 546 DFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-DVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 546 v~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DfGla~~~~~~~~~ 622 (746)
++||+.+-+.+ ...++..+++.++.|+++||+|+|++ ||+|||+||.|++||. .-.++++|+|+|...-+
T Consensus 113 iFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp---- 185 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP---- 185 (338)
T ss_pred HhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCC----
Confidence 99999888776 56788899999999999999999999 9999999999999995 56799999999988622
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......+.+..|.-||++.......+ .-|+|||||+++
T Consensus 186 -----~~eYnVRVASRyfKGPELLVdy~~YDY--SLD~WS~GcmlA 224 (338)
T KOG0668|consen 186 -----GKEYNVRVASRYFKGPELLVDYQMYDY--SLDMWSLGCMLA 224 (338)
T ss_pred -----CceeeeeeehhhcCCchheeechhccc--cHHHHHHHHHHH
Confidence 233344677889999999987655444 799999999998
|
|
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=253.66 Aligned_cols=174 Identities=21% Similarity=0.298 Sum_probs=148.1
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+|+..+.||+|+||.||. ||+|++.... ....+.+.+|++++++++||||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 478899999999999996 8999876432 33456789999999999999999999999999999999999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
++++++. ...+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 155 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-- 155 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch--
Confidence 9998875 22578999999999999999999999 99999999999999999999999999997653211
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......|+..|+|||++.+..++. ++|||||||+++
T Consensus 156 ------~~~~~~~~~~~~~~pe~~~~~~~~~---~~Dv~slG~i~~ 192 (256)
T cd08218 156 ------ELARTCIGTPYYLSPEICENRPYNN---KSDIWALGCVLY 192 (256)
T ss_pred ------hhhhhccCCccccCHHHhCCCCCCC---ccchhHHHHHHH
Confidence 1112356889999999998876654 499999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=255.03 Aligned_cols=178 Identities=19% Similarity=0.303 Sum_probs=147.0
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh-----hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ-----KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFE 543 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-----~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~ 543 (746)
.+|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688899999999999996 8999875321 23356788999999999999999999998764 357
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+++|||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence 7899999999886 34578899999999999999999999 999999999999999999999999999986532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... ........|+..|+|||++.+..++. ++|||||||++|
T Consensus 159 ~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slG~il~ 200 (265)
T cd06652 159 ICLS-----GTGMKSVTGTPYWMSPEVISGEGYGR---KADIWSVGCTVV 200 (265)
T ss_pred cccc-----ccccccCCCCccccChhhhcCCCCCc---chhHHHHHHHHH
Confidence 1110 01122356899999999998776654 599999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-29 Score=259.54 Aligned_cols=184 Identities=20% Similarity=0.214 Sum_probs=153.1
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
-|..++.||-|+||+|.. ||+|.+++.+ ......++.|-+||+..+.+-||+||-.|.+.+.+|+||+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 477899999999999985 7889887654 2334567899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc------
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY------ 617 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~------ 617 (746)
|+++|++- ...|.+.-++.++.++.+|+++.|.+ |+|||||||+|||||.+|++|++|||++.-+.
T Consensus 710 YIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdsk 786 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 786 (1034)
T ss_pred ccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceeccccc
Confidence 99999874 66789999999999999999999999 99999999999999999999999999985331
Q ss_pred --CCCCCC--------------------------CcccccccccccccccccccccccccccccCCCccceeeccceeec
Q 041467 618 --GYEPGT--------------------------TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFAL 669 (746)
Q Consensus 618 --~~~~~~--------------------------~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~ 669 (746)
....+. .....-.....+||+.|+|||++....|+.- +|+||.|||+|.
T Consensus 787 YYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~---cdwws~gvil~e 863 (1034)
T KOG0608|consen 787 YYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQL---CDWWSVGVILYE 863 (1034)
T ss_pred cccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCcccc---chhhHhhHHHHH
Confidence 111100 0001112234689999999999998888776 999999999993
Q ss_pred c
Q 041467 670 N 670 (746)
Q Consensus 670 ~ 670 (746)
+
T Consensus 864 m 864 (1034)
T KOG0608|consen 864 M 864 (1034)
T ss_pred H
Confidence 3
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-28 Score=258.05 Aligned_cols=221 Identities=20% Similarity=0.256 Sum_probs=164.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
...|+..+.||+|+||.||+ ||+|++.... .+..+.+.+|+++++.++||||++++++|.+.+..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 35588899999999999996 8999875332 23445788999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
+||+.++... ...+++.++..++.|++.|+.|||+. +|+||||+|+||++++++.+||+|||++......
T Consensus 94 ~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-- 168 (307)
T cd06607 94 MEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-- 168 (307)
T ss_pred HHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCC--
Confidence 9999754322 34689999999999999999999999 9999999999999999999999999998764211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccccc--------cchh---h-ccc-cCCCc
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQN--------KSIL---K-SAG-IKGKK 688 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~~--------~~i~---~-~~~-~~~~~ 688 (746)
....|+..|+|||++.+......+.++|||||||++|....... ..+. . ..+ .+...
T Consensus 169 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (307)
T cd06607 169 ----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSND 238 (307)
T ss_pred ----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchh
Confidence 12567889999999864322233556999999999982211110 0000 0 001 11112
Q ss_pred cHHHHHHhhCCCCCCCCC-CCCccchh
Q 041467 689 TVSFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 689 ~~~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
....+..++..|+...|+ ||++.++.
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rp~~~~il 265 (307)
T cd06607 239 WSDYFRNFVDSCLQKIPQDRPSSEELL 265 (307)
T ss_pred hCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 234456666666666666 77777654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=252.55 Aligned_cols=175 Identities=21% Similarity=0.358 Sum_probs=145.5
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.++|...+.||+|+||.||+ ||+|.+... ....+.+.+|++++++++||||+++++++.. ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 46788999999999999996 788877643 2234678999999999999999999999887 7789999999
Q ss_pred cCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++|++. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 157 (260)
T cd05073 83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-- 157 (260)
T ss_pred CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCc--
Confidence 999885 23478899999999999999999998 999999999999999999999999999976532211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|+|||++....++. ++|||||||++|
T Consensus 158 -----~~~~~~~~~~~y~~PE~~~~~~~~~---~~Di~slG~~l~ 194 (260)
T cd05073 158 -----TAREGAKFPIKWTAPEAINFGSFTI---KSDVWSFGILLM 194 (260)
T ss_pred -----ccccCCcccccccCHhHhccCCcCc---cccchHHHHHHH
Confidence 1111234567899999998766654 499999999988
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=253.37 Aligned_cols=173 Identities=21% Similarity=0.278 Sum_probs=150.2
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
++|+..+.||+|+||.||+ ||+|.+..... .+.+.+|++++++++||||+++++++......++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 5788999999999999996 78888764433 668999999999999999999999999999999999999
Q ss_pred cCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 551 SNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 551 ~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+++++. ...+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--- 154 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--- 154 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCcc---
Confidence 999885 45689999999999999999999999 999999999999999999999999999987633211
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||++.+..++.+ +||||+||++|
T Consensus 155 -----~~~~~~~~~~y~~PE~~~~~~~~~~---~Di~s~G~il~ 190 (256)
T cd06612 155 -----KRNTVIGTPFWMAPEVIQEIGYNNK---ADIWSLGITAI 190 (256)
T ss_pred -----ccccccCCccccCHHHHhcCCCCch---hhHHHHHHHHH
Confidence 1122457899999999988766554 99999999998
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-28 Score=253.30 Aligned_cols=175 Identities=21% Similarity=0.373 Sum_probs=145.2
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.++|+..+.||+|+||.||+ ||+|.+.... .....+.+|+.++++++||||+++++++. .+..+++|||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 45788899999999999996 8999876432 23457899999999999999999999864 46789999999
Q ss_pred cCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++|++. ...+++.++..++.|++.|++|||+. +++||||||+||++++++.++++|||+++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCc--
Confidence 999885 23578999999999999999999998 999999999999999999999999999976532111
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|+|||++.+..++. ++|||||||++|
T Consensus 158 -----~~~~~~~~~~~y~~pe~~~~~~~~~---~~Di~slG~~l~ 194 (260)
T cd05067 158 -----TAREGAKFPIKWTAPEAINYGTFTI---KSDVWSFGILLT 194 (260)
T ss_pred -----ccccCCcccccccCHHHhccCCcCc---ccchHHHHHHHH
Confidence 0111234577899999998776654 499999999988
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-29 Score=263.42 Aligned_cols=173 Identities=22% Similarity=0.292 Sum_probs=148.0
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
|+....||+|+||.||+ ||+|++........+.+.+|+.+++.++||||+++++++...+..++++||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 44456799999999996 899998655444556788999999999999999999999999999999999999
Q ss_pred Cccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccc
Q 041467 553 GQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628 (746)
Q Consensus 553 g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~ 628 (746)
+++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 103 ~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~------- 172 (297)
T cd06659 103 GALTDIVSQTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP------- 172 (297)
T ss_pred CCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc-------
Confidence 9886 44689999999999999999999999 999999999999999999999999999876532211
Q ss_pred cccccccccccccccccccccccccCCCccceeeccceee
Q 041467 629 SSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 629 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||++.+..++. ++||||+||++|
T Consensus 173 -~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slG~il~ 208 (297)
T cd06659 173 -KRKSLVGTPYWMAPEVISRTPYGT---EVDIWSLGIMVI 208 (297)
T ss_pred -cccceecCccccCHHHHccCCCCc---hhhHHHHHHHHH
Confidence 122366899999999998776654 599999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=255.20 Aligned_cols=175 Identities=22% Similarity=0.326 Sum_probs=144.6
Q ss_pred cCCCCCCeEeecCCeeEEE------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 480 NNFSPANKIREGGFNIVYN------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.+|+..+.||+|+||.||+ ||||...... ....+.+.+|+.++++++||||+++++++.+ +..+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 4578889999999999996 6778765443 3445679999999999999999999998875 567899
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||+++|++. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 9999999886 23589999999999999999999998 99999999999999999999999999998764321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. ......++..|+|||.+....++. ++|||||||++|
T Consensus 162 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 199 (270)
T cd05056 162 YY-------KASKGKLPIKWMAPESINFRRFTS---ASDVWMFGVCMW 199 (270)
T ss_pred ce-------ecCCCCccccccChhhhccCCCCc---hhhhHHHHHHHH
Confidence 10 011233456899999988776654 499999999987
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-29 Score=276.91 Aligned_cols=177 Identities=20% Similarity=0.237 Sum_probs=139.2
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCC------CceeeEEEEEe
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRH------RNLIKIITICS 538 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~H------pnIv~l~~~~~ 538 (746)
++....++|+..+.||+|+||.||+ ||||+++... ...+.+.+|+++++.++| ++|+++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 3444568899999999999999997 8999985322 223445667777766654 56899999887
Q ss_pred cC-CcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC---------
Q 041467 539 SI-DFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV--------- 603 (746)
Q Consensus 539 ~~-~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~--------- 603 (746)
.. ...++|||++ ++.+. ...+++.++..|+.||+.||+|||+.+ +||||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NILl~~~~~~~~~~~~~ 278 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENILMETSDTVVDPVTNR 278 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEEecCCccccccccc
Confidence 65 4678888887 44442 456899999999999999999999732 899999999999998665
Q ss_pred -------cEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 604 -------VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 604 -------~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.+||+|||.+.... ......+||+.|||||++.+..++.+ +|||||||++|
T Consensus 279 ~~~~~~~~vkl~DfG~~~~~~-----------~~~~~~~gt~~Y~APE~~~~~~~~~~---~DiwSlGvil~ 336 (467)
T PTZ00284 279 ALPPDPCRVRICDLGGCCDER-----------HSRTAIVSTRHYRSPEVVLGLGWMYS---TDMWSMGCIIY 336 (467)
T ss_pred ccCCCCceEEECCCCccccCc-----------cccccccCCccccCcHHhhcCCCCcH---HHHHHHHHHHH
Confidence 49999999875421 11234789999999999998877654 99999999998
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-28 Score=251.90 Aligned_cols=169 Identities=25% Similarity=0.357 Sum_probs=142.1
Q ss_pred cCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 480 NNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
.+|+..+.||+|+||.||+ ||+|++.... ..+.+.+|+.++++++||||+++++++... ..+++|||+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~ 82 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSK 82 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCC
Confidence 5688899999999999997 8999875432 335788999999999999999999998764 57899999999
Q ss_pred Cccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 553 GQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 553 g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
|++. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~----- 154 (254)
T cd05083 83 GNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV----- 154 (254)
T ss_pred CCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC-----
Confidence 9885 23478999999999999999999998 99999999999999999999999999987542111
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+..|+|||.+.+..++. ++||||+||++|
T Consensus 155 ------~~~~~~~~y~~pe~~~~~~~~~---~~Dv~slG~~l~ 188 (254)
T cd05083 155 ------DNSKLPVKWTAPEALKHKKFSS---KSDVWSYGVLLW 188 (254)
T ss_pred ------CCCCCCceecCHHHhccCCcCc---hhhHHHHHHHHH
Confidence 1123456899999998776654 499999999988
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-28 Score=260.96 Aligned_cols=183 Identities=23% Similarity=0.258 Sum_probs=150.6
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|++|.||+ ||+|.+.... ....+.+.+|+++++.++||||+++++++......+++|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 3688889999999999996 8999886442 224567899999999999999999999999999999999
Q ss_pred hhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 548 KAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 548 e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||+.++++. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 999999885 24689999999999999999999999 99999999999999999999999999987653221
Q ss_pred CCCC---------------------cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTT---------------------AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~---------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... ...........||..|+|||++.+..++. ++|||||||++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~~Di~slG~ll~ 223 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGS---AVDWWTLGILLY 223 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCc---hHHHHHHHHHHH
Confidence 1100 00011122457899999999998776654 499999999998
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-29 Score=240.87 Aligned_cols=171 Identities=21% Similarity=0.244 Sum_probs=139.9
Q ss_pred hhcCCCC-CCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEec----CCc
Q 041467 478 ATNNFSP-ANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSS----IDF 542 (746)
Q Consensus 478 ~~~~~~~-~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~----~~~ 542 (746)
.+++|++ .++||-|-.|.|.. +|+|++. +....+||++..-.. .|||||.++++|+. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 4566654 47899999999874 6777664 334578899976555 59999999998765 346
Q ss_pred ccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC---CCCcEEEccccc
Q 041467 543 EGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGL 612 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~---~~~~~ki~DfGl 612 (746)
..+|||+|++|.|. ...+++.++..|++||+.|+.|||+. +|.||||||+|+|.. .+..+|++|||+
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccccc
Confidence 77999999999995 45699999999999999999999999 999999999999996 456799999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+.-.. .....+.+-|++|.|||++-..+|+. .+|+||+||+||
T Consensus 211 AK~t~~---------~~~L~TPc~TPyYvaPevlg~eKydk---scdmwSlgVimY 254 (400)
T KOG0604|consen 211 AKETQE---------PGDLMTPCFTPYYVAPEVLGPEKYDK---SCDMWSLGVIMY 254 (400)
T ss_pred ccccCC---------CccccCCcccccccCHHHhCchhcCC---CCCccchhHHHH
Confidence 987421 12334567899999999998888754 599999999999
|
|
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-28 Score=256.45 Aligned_cols=174 Identities=22% Similarity=0.295 Sum_probs=144.0
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+|+..+.||+|++|.||+ ||||++.... ....+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 477889999999999997 8999876432 22345688999999999999999999999999999999999
Q ss_pred ccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 550 ISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
+++ ++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 974 442 24689999999999999999999999 99999999999999999999999999997642211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......|++.|+|||++.+... .+.++||||+||++|
T Consensus 156 -------~~~~~~~~~~~y~aPE~~~~~~~--~~~~~Dv~slG~il~ 193 (285)
T cd07861 156 -------RVYTHEVVTLWYRAPEVLLGSPR--YSTPVDIWSIGTIFA 193 (285)
T ss_pred -------ccccCCcccccccChHHhcCCCC--cCcHHHHHHHHHHHH
Confidence 11123467899999999876532 234599999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=254.06 Aligned_cols=177 Identities=24% Similarity=0.378 Sum_probs=148.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
..++|+..+.||+|+||.||+ ||||.+.... ...+++.+|+.++++++||||+++++++......+++|||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 356789999999999999996 7899876432 2346789999999999999999999999988899999999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
++++++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+|++|||+++.......
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~- 158 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY- 158 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhh-
Confidence 9999885 23689999999999999999999999 999999999999999999999999999986532111
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|+|||.+.+..++.+ +||||+||++|
T Consensus 159 ------~~~~~~~~~~~y~~PE~~~~~~~~~~---~Di~slG~il~ 195 (261)
T cd05034 159 ------TAREGAKFPIKWTAPEAANYGRFTIK---SDVWSFGILLT 195 (261)
T ss_pred ------hhhhccCCCccccCHHHhccCCcCch---hHHHHHHHHHH
Confidence 00112234578999999987766554 99999999988
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=259.50 Aligned_cols=176 Identities=19% Similarity=0.291 Sum_probs=145.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||+|.+.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 46789999999999999996 8999886443 2234567889999999999999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+.+ ++. ...+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (301)
T cd07873 85 YLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 158 (301)
T ss_pred cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence 9974 553 34578999999999999999999999 99999999999999999999999999997642211
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......+++.|+|||++.+... .+.++||||+||++|
T Consensus 159 ------~~~~~~~~~~~y~~PE~~~~~~~--~~~~~Dv~slG~~l~ 196 (301)
T cd07873 159 ------KTYSNEVVTLWYRPPDILLGSTD--YSTQIDMWGVGCIFY 196 (301)
T ss_pred ------CcccccceeecccCcHHHhCCCC--CccHHHHHHHHHHHH
Confidence 11123457899999999876432 234699999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-28 Score=256.33 Aligned_cols=228 Identities=17% Similarity=0.232 Sum_probs=167.9
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEec-CCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSS-IDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~ 543 (746)
.++|+..+.||+|+||.||+ ||+|++... .....+.+.+|+.++++++||||+++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 46788899999999999996 567766532 23345678999999999999999999998876 4678
Q ss_pred cchhhhccCCccc----c---------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccc
Q 041467 544 GFDFKAISNGQLR----L---------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610 (746)
Q Consensus 544 ~lv~e~~~~g~l~----~---------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~Df 610 (746)
+++++|+++|++. . ..+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence 8999999988875 1 4578999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc--ccc------cchhh--
Q 041467 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQN------KSILK-- 680 (746)
Q Consensus 611 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~~------~~i~~-- 680 (746)
|+++.+...... .......++..|+|||++.+..++.+ +||||+||++|.... ... ..+..
T Consensus 162 g~~~~~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~~---~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 232 (280)
T cd05043 162 ALSRDLFPMDYH------CLGDNENRPVKWMALESLVNKEYSSA---SDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYL 232 (280)
T ss_pred CCcccccCCceE------EeCCCCCcchhccCHHHHhcCCCCch---hhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence 999865432211 01112345778999999987766554 999999999883221 100 01111
Q ss_pred -cc-c-cCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 681 -SA-G-IKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 681 -~~-~-~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.. . .......+.+.+++..|+...|+ ||+..++...+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 274 (280)
T cd05043 233 KDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLT 274 (280)
T ss_pred HcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 10 1 11122334566677777766777 888776665443
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-29 Score=258.95 Aligned_cols=177 Identities=18% Similarity=0.244 Sum_probs=147.9
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
++|+..+.||+|+||.||+ ||+|.+... .......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 3688899999999999997 899987643 233346788999999999999999999999999999999999
Q ss_pred ccCCccc----c----cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 550 ISNGQLR----L----CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~----~----~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
++++++. . ..+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||++..+....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 157 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL- 157 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-
Confidence 9999875 2 26899999999999999999999743 89999999999999999999999999997652211
Q ss_pred CCCccccccccccccccccccccccccccc---ccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNL---ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~---~~~~~~~DiwSlG~i~~ 668 (746)
.....|+..|+|||++.+... ..++.++||||+||++|
T Consensus 158 ---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~ 198 (286)
T cd06622 158 ---------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSIL 198 (286)
T ss_pred ---------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHH
Confidence 122457889999999865543 12255699999999998
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.2e-29 Score=261.78 Aligned_cols=220 Identities=20% Similarity=0.234 Sum_probs=174.6
Q ss_pred CCCCeEeecCCeeEEE------------EEeehhhhhhhh-hhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 483 SPANKIREGGFNIVYN------------VAMKVANLKQKE-ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~------------vavK~~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
...+.||+|+||.|++ ||||+++..... ...+|.+|+.+|.+++|||+|+|||+..+ ....+|||+
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 3467899999999997 999999765433 67789999999999999999999999988 678899999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
++.|+|- ...+--.....|+.|||.|+.||.++ +.||||+..+|+|+-....+||+|||+.|.+...+..
T Consensus 192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 9999984 34566778889999999999999999 9999999999999999999999999999988654432
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceeecc--cccc------ccchhh-----ccccCCCcc
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALN--EKKQ------NKSILK-----SAGIKGKKT 689 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~--~~~~------~~~i~~-----~~~~~~~~~ 689 (746)
.... -...-...|.|||.+...+++.+ +|||+|||.+|.. ..+. ...|+. ..-...+.+
T Consensus 269 Yvm~-----p~rkvPfAWCaPEsLrh~kFSha---SDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~c 340 (1039)
T KOG0199|consen 269 YVMA-----PQRKVPFAWCAPESLRHRKFSHA---SDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYC 340 (1039)
T ss_pred eEec-----CCCcCcccccCHhHhcccccccc---chhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCC
Confidence 1100 01222457999999999999776 9999999988811 1110 011111 122334677
Q ss_pred HHHHHHhhCCCCCCCCC-CCCccchh
Q 041467 690 VSFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 690 ~~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
...|..++..||...|. ||+.....
T Consensus 341 sedIY~imk~cWah~paDRptFsair 366 (1039)
T KOG0199|consen 341 SEDIYQIMKNCWAHNPADRPTFSAIR 366 (1039)
T ss_pred hHHHHHHHHHhccCCccccccHHHHH
Confidence 88899999999999998 99998764
|
|
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=255.73 Aligned_cols=187 Identities=20% Similarity=0.268 Sum_probs=150.4
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEec
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSS 539 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~ 539 (746)
.+..++....+.|+..+.+|+|+||.||+ ||+|++.... .....+..|+.+++++ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 34556666778999999999999999996 7899875433 2345688999999998 69999999999864
Q ss_pred ------CCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEE
Q 041467 540 ------IDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTH 606 (746)
Q Consensus 540 ------~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~k 606 (746)
....+++|||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEE
Confidence 34678999999998885 23478888999999999999999999 999999999999999999999
Q ss_pred EccccccccccCCCCCCCcccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 607 VGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 607 i~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
|+|||++....... .......|+..|+|||++.... ...++.++||||+||++|
T Consensus 162 l~dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~ 217 (282)
T cd06636 162 LVDFGVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAI 217 (282)
T ss_pred EeeCcchhhhhccc--------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHH
Confidence 99999987653211 1122367899999999986321 122344699999999988
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-28 Score=253.36 Aligned_cols=178 Identities=22% Similarity=0.325 Sum_probs=146.7
Q ss_pred cCCCCCCeEeecCCeeEEE-------------EEeehhhhhhhh-hhHHHHHHHHHhhcCCCCceeeEEEEEec--CCcc
Q 041467 480 NNFSPANKIREGGFNIVYN-------------VAMKVANLKQKE-ASRSFAAEFNALRNIRHRNLIKIITICSS--IDFE 543 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~~ 543 (746)
++|+..+.||+|+||.||+ ||||++...... ..+.+.+|+++++.++||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 4577889999999999995 789988654332 46679999999999999999999999887 5578
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
+++|||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||.+....
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 9999999999886 22489999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ........++..|+|||.+.+..++. ++|||||||++|
T Consensus 161 ~~~~~-----~~~~~~~~~~~~~~~Pe~~~~~~~~~---~~Di~slG~~l~ 203 (284)
T cd05038 161 EDKDY-----YYVKEPGESPIFWYAPECLRTSKFSS---ASDVWSFGVTLY 203 (284)
T ss_pred cCCcc-----eeccCCCCCcccccCcHHHccCCCCc---ccchHHHhhhhh
Confidence 22111 00111234566799999998776654 499999999998
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-29 Score=260.20 Aligned_cols=175 Identities=20% Similarity=0.293 Sum_probs=144.4
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+|+..+.||+|+||.||+ ||+|++.... ......+.+|++++++++||||+++++++.+....++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 477889999999999997 8899876432 22335678899999999999999999999999999999999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+.++.+. ...+++..+..++.||++|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---- 153 (284)
T cd07839 81 CDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV---- 153 (284)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC----
Confidence 9754322 34589999999999999999999999 99999999999999999999999999997653211
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|+|||++.+... ++.++||||+||++|
T Consensus 154 ----~~~~~~~~~~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 191 (284)
T cd07839 154 ----RCYSAEVVTLWYRPPDVLFGAKL--YSTSIDMWSAGCIFA 191 (284)
T ss_pred ----CCcCCCccccCCcChHHHhCCcc--cCcHHHHHHHHHHHH
Confidence 11123567899999999876542 234599999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=256.72 Aligned_cols=176 Identities=21% Similarity=0.304 Sum_probs=151.5
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|+..+.||+|+||.||+ ||+|++........+.+.+|+.++++++||||+++++++...+..++|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 46788999999999999997 899988655444556789999999999999999999999999999999999
Q ss_pred ccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 550 ISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 550 ~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
+++|++. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 98 ~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~---- 170 (293)
T cd06647 98 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---- 170 (293)
T ss_pred CCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc----
Confidence 9999986 34678999999999999999999999 999999999999999999999999999876532211
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|++.|+|||.+.+..++. ++|||||||++|
T Consensus 171 ----~~~~~~~~~~y~~PE~~~~~~~~~---~~Dv~slG~ll~ 206 (293)
T cd06647 171 ----KRSTMVGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAI 206 (293)
T ss_pred ----ccccccCChhhcCchhhccCCCCc---hhhHHHHHHHHH
Confidence 112346889999999998776654 599999999988
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-28 Score=254.86 Aligned_cols=175 Identities=18% Similarity=0.259 Sum_probs=150.0
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
..|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 4577888999999999997 8999876442 34456789999999999999999999999999999999999
Q ss_pred ccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 550 ISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 550 ~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
+++|++. ...+++.++..++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||++........
T Consensus 84 ~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~---- 156 (277)
T cd06640 84 LGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI---- 156 (277)
T ss_pred CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCcc----
Confidence 9999875 45688999999999999999999999 999999999999999999999999999976533211
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||++.+..++. ++|||||||++|
T Consensus 157 ----~~~~~~~~~~y~apE~~~~~~~~~---~~Dv~slG~il~ 192 (277)
T cd06640 157 ----KRNTFVGTPFWMAPEVIQQSAYDS---KADIWSLGITAI 192 (277)
T ss_pred ----ccccccCcccccCHhHhccCCCcc---HHHHHHHHHHHH
Confidence 112246788999999998776654 499999999998
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-29 Score=258.00 Aligned_cols=174 Identities=20% Similarity=0.260 Sum_probs=148.4
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++......++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 456678899999999997 8999876443 334567899999999999999999999999999999999999
Q ss_pred cCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcc
Q 041467 551 SNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626 (746)
Q Consensus 551 ~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~ 626 (746)
++|++. ...+++..+..++.|+++|++|||+. +|+|+||+|+||++++++.+|++|||+++.+.....
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~----- 156 (277)
T cd06642 85 GGGSALDLLKPGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI----- 156 (277)
T ss_pred CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcch-----
Confidence 999885 45688999999999999999999998 999999999999999999999999999976532211
Q ss_pred cccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 627 TASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 627 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||++.+..++. ++|||||||++|
T Consensus 157 ---~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slG~il~ 192 (277)
T cd06642 157 ---KRNTFVGTPFWMAPEVIKQSAYDF---KADIWSLGITAI 192 (277)
T ss_pred ---hhhcccCcccccCHHHhCcCCCch---hhhHHHHHHHHH
Confidence 112256889999999998876654 499999999988
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=256.63 Aligned_cols=187 Identities=21% Similarity=0.287 Sum_probs=151.2
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEec
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSS 539 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~ 539 (746)
+...++..+.++|+..+.||+|+||.||+ ||+|++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 34455666788999999999999999997 7888875332 2235678899999999 79999999999875
Q ss_pred CC-----cccchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcE
Q 041467 540 ID-----FEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605 (746)
Q Consensus 540 ~~-----~~~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 605 (746)
.+ ..++||||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCE
Confidence 43 578999999999885 24689999999999999999999999 99999999999999999999
Q ss_pred EEccccccccccCCCCCCCccccccccccccccccccccccccccc--ccCCCccceeeccceee
Q 041467 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL--ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 606 ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~--~~~~~~~DiwSlG~i~~ 668 (746)
||+|||+++....... ......|+..|+|||++..... ...+.++||||+||++|
T Consensus 168 kl~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~ 224 (291)
T cd06639 168 KLVDFGVSAQLTSTRL--------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAI 224 (291)
T ss_pred EEeecccchhcccccc--------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHH
Confidence 9999999986532111 1123568899999999865431 11245699999999998
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=250.51 Aligned_cols=171 Identities=26% Similarity=0.435 Sum_probs=144.9
Q ss_pred CeEeecCCeeEEE------------EEeehhhhhhhh-hhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN------------VAMKVANLKQKE-ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~------------vavK~~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||+|++...... ..+.+.+|+++++.++||||+++++++......+++|||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 4689999999997 578877654332 367789999999999999999999999998999999999999
Q ss_pred Cccc-----c---------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 553 GQLR-----L---------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 553 g~l~-----~---------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
|++. . ..+++.++..++.|++.|++|||+. +|+||||||+||++++++.+|++|||.++....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9885 2 5689999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .......++..|+|||.+....++. ++||||+||++|
T Consensus 158 ~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 198 (262)
T cd00192 158 DDYY------RKKTGGKLPIRWMAPESLKDGIFTS---KSDVWSFGVLLW 198 (262)
T ss_pred cccc------ccccCCCcCccccCHHHhccCCcch---hhccHHHHHHHH
Confidence 3210 1122356788999999998775544 599999999998
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.9e-29 Score=258.36 Aligned_cols=176 Identities=21% Similarity=0.300 Sum_probs=148.0
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
++|+..+.||+|+||.||+ ||+|++..... ...+.+.+|+++++.++||||+++++++...+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 3688899999999999997 89998764322 234568899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|++++.+. ...+++.++..++.|++.|++|||+. +|+|||++|+||++++++.+|++|||++..+....
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--- 154 (286)
T cd07846 81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--- 154 (286)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---
Confidence 99988775 23589999999999999999999999 99999999999999999999999999998653221
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......|+.+|+|||++.+... .+.++|||||||++|
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~--~~~~~Dv~slG~~l~ 192 (286)
T cd07846 155 -----EVYTDYVATRWYRAPELLVGDTK--YGRAVDIWAVGCLVT 192 (286)
T ss_pred -----cccCcccceeeccCcHHhccccc--cCchHhHHHHHHHHH
Confidence 11223568899999999876432 234699999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-28 Score=251.57 Aligned_cols=178 Identities=17% Similarity=0.307 Sum_probs=148.8
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh------hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ------KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~------~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
+|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999996 8999886432 2235678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC-cEEEccccccccccCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV-VTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~-~~ki~DfGla~~~~~~ 619 (746)
|+||++++++. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++ .+||+|||.+..+...
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 99999999885 45688999999999999999999999 999999999999998775 5999999999876433
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... ........||..|+|||++.+..++. ++||||+||++|
T Consensus 158 ~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~---~~Dv~slG~~l~ 199 (268)
T cd06630 158 GTGA----GEFQGQLLGTIAFMAPEVLRGEQYGR---SCDVWSVGCVII 199 (268)
T ss_pred cccC----CccccccccccceeCHhHhccCCCCc---ccchHHHHHHHH
Confidence 2111 11112356889999999998776654 499999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-28 Score=262.59 Aligned_cols=176 Identities=19% Similarity=0.226 Sum_probs=145.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID----- 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~----- 541 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|+.++++++||||+++++++....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999996 899987532 2333456788999999999999999999986543
Q ss_pred -cccchhhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 542 -FEGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 542 -~~~lv~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
..++||||+.+.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 94 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 94 QDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred CcEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 468999999653222 33489999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. ......||..|+|||++.+..++.+ +||||+||++|
T Consensus 171 ~~---------~~~~~~~~~~y~aPE~~~~~~~~~~---~DvwslG~~l~ 208 (353)
T cd07850 171 SF---------MMTPYVVTRYYRAPEVILGMGYKEN---VDIWSVGCIMG 208 (353)
T ss_pred CC---------CCCCCcccccccCHHHHhCCCCCCc---hhhHhHHHHHH
Confidence 11 1223568899999999988777554 99999999988
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=255.17 Aligned_cols=177 Identities=20% Similarity=0.273 Sum_probs=145.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh-hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQK-EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++.+|...+.||+|+||.||+ ||+|++..... .....+.+|+++++.++||||+++++++...+..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 457899999999999999996 89998864432 23346789999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+.++.+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 158 (291)
T cd07870 83 EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ- 158 (291)
T ss_pred ecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCCC-
Confidence 999644332 23568889999999999999999999 999999999999999999999999999976422111
Q ss_pred CCcccccccccccccccccccccccccc-cccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARN-LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~~~~DiwSlG~i~~ 668 (746)
......++..|+|||++.+.. ++. ++||||+||++|
T Consensus 159 -------~~~~~~~~~~y~aPE~~~~~~~~~~---~~Dv~slG~~l~ 195 (291)
T cd07870 159 -------TYSSEVVTLWYRPPDVLLGATDYSS---ALDIWGAGCIFI 195 (291)
T ss_pred -------CCCCccccccccCCceeecCCCCCc---HHHHHHHHHHHH
Confidence 112345789999999987643 333 599999999998
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-28 Score=250.21 Aligned_cols=175 Identities=22% Similarity=0.392 Sum_probs=145.9
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
.+|+..+.||+|+||.||+ +|+|.+.... .....+.+|++++++++||||+++++++......+++|||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 4677889999999999996 7888775332 223568899999999999999999999999999999999999
Q ss_pred CCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 552 NGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 552 ~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
+|++. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~---- 155 (256)
T cd05112 83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY---- 155 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc----
Confidence 99875 23578999999999999999999999 999999999999999999999999999876532211
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|+|||++.+..++. ++||||+||++|
T Consensus 156 ---~~~~~~~~~~~~~aPe~~~~~~~~~---~~Dv~slG~~l~ 192 (256)
T cd05112 156 ---TSSTGTKFPVKWSSPEVFSFSKYSS---KSDVWSFGVLMW 192 (256)
T ss_pred ---cccCCCccchhhcCHhHhccCCcCh---HHHHHHHHHHHH
Confidence 1111234567899999998776654 499999999998
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-28 Score=257.42 Aligned_cols=174 Identities=24% Similarity=0.330 Sum_probs=144.9
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhhhh-----hhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQKE-----ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~-----~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
+|+..+.||+|+||.||+ ||||++...... ....+..|++++++++||||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 477888999999999997 899988654322 334577899999999999999999999998999999
Q ss_pred hhhccCCccc-----cc-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR-----LC-NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~-----~~-~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||+ +|++. .. .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 9999 88775 22 589999999999999999999999 99999999999999999999999999998753321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......++..|+|||.+.+... ++.++||||+||++|
T Consensus 157 ~--------~~~~~~~~~~y~aPE~~~~~~~--~~~~~Dv~slG~il~ 194 (298)
T cd07841 157 R--------KMTHQVVTRWYRAPELLFGARH--YGVGVDMWSVGCIFA 194 (298)
T ss_pred c--------cccccccceeeeCHHHHhCCCC--CCcHHHHHHHHHHHH
Confidence 1 1122456889999999865432 244699999999988
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-28 Score=249.78 Aligned_cols=173 Identities=22% Similarity=0.354 Sum_probs=147.5
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh-----hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ-----KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-----~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
+|+..+.||+|++|.||+ ||+|.+.... ++..+.+.+|+++++.++||||+++++++......+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 477889999999999997 8889875432 23456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
+||++++++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~- 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS- 156 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccccc-
Confidence 9999999885 34588999999999999999999999 99999999999999999999999999987653221
Q ss_pred CCCcccccccccccccccccccccccccc-cccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARN-LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||.+.... + +.++|+||+||++|
T Consensus 157 --------~~~~~~~~~~y~~pe~~~~~~~~---~~~~D~~slG~~l~ 193 (258)
T cd06632 157 --------FAKSFKGSPYWMAPEVIAQQGGY---GLAADIWSLGCTVL 193 (258)
T ss_pred --------cccccCCCcceeCHHHhcCCCCC---CchhhhHHHHHHHH
Confidence 112356889999999987665 4 34599999999988
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-28 Score=257.20 Aligned_cols=180 Identities=15% Similarity=0.128 Sum_probs=141.8
Q ss_pred CCCeEeec--CCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 484 PANKIREG--GFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 484 ~~~~ig~g--~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
..++||+| +|++||+ ||||++.... ....+.+.+|+++++.++|||||+++++|...+..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 6788986 8999986542 334456788999999999999999999999999999999999
Q ss_pred cCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++|++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+..........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999875 23488999999999999999999999 99999999999999999999999998765442211110
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ..........++..|+|||++.+... .++.++||||+||++|
T Consensus 159 ~-~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~~DiwslG~il~ 201 (327)
T cd08227 159 R-VVHDFPKYSVKVLPWLSPEVLQQNLQ-GYDAKSDIYSVGITAC 201 (327)
T ss_pred c-ccccccccccceecccChHHhhcccC-CCCchhhHHHHHHHHH
Confidence 0 00001112457788999999976321 1244599999999998
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-28 Score=253.57 Aligned_cols=180 Identities=22% Similarity=0.294 Sum_probs=148.0
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCC-----
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSID----- 541 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~----- 541 (746)
..+++|+..+.||+|++|.||+ ||+|++..... ..+.+.+|+.+++++ +||||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 4568999999999999999997 78888754432 345789999999999 6999999999997644
Q ss_pred -cccchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 542 -FEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 542 -~~~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
..+++|||++++++. ...+++..+..++.|++.|++|||+. +|+||||+|+||++++++.+|++|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCc
Confidence 478999999998874 24689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCCccccccccccccccccccccccccccc--ccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL--ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~--~~~~~~~DiwSlG~i~~ 668 (746)
++....... .......|+..|+|||++..... ..++.++||||+||++|
T Consensus 159 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~ 209 (275)
T cd06608 159 VSAQLDSTL--------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAI 209 (275)
T ss_pred cceecccch--------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHH
Confidence 987653211 11123568999999999865432 12355799999999998
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=251.64 Aligned_cols=175 Identities=23% Similarity=0.348 Sum_probs=140.5
Q ss_pred CCCCCeEeecCCeeEEE------------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC------
Q 041467 482 FSPANKIREGGFNIVYN------------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID------ 541 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~------------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------ 541 (746)
|...+.||+|+||.||+ ||||++... .....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 56678999999999995 788887643 2334567889999999999999999999886543
Q ss_pred cccchhhhccCCccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccc
Q 041467 542 FEGFDFKAISNGQLR-----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~Df 610 (746)
..++++||+.+|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 236788999888874 12478889999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 611 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+++........ .......++..|+|||.+....++. ++|||||||++|
T Consensus 158 g~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~---~sDi~slG~il~ 206 (273)
T cd05074 158 GLSKKIYSGDYY------RQGCASKLPVKWLALESLADNVYTT---HSDVWAFGVTMW 206 (273)
T ss_pred cccccccCCcce------ecCCCccCchhhcCHhHHhcCccch---hhhhHHHHHHHH
Confidence 999865322110 1111234567899999998776654 499999999998
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.4e-28 Score=252.17 Aligned_cols=176 Identities=22% Similarity=0.305 Sum_probs=147.5
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 4688899999999999997 8999875432 2234568899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|++++.+. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++..+.....
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-- 155 (286)
T cd07847 81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-- 155 (286)
T ss_pred ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcc--
Confidence 99988765 34689999999999999999999998 999999999999999999999999999987633211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||++.+... ++.++||||+||++|
T Consensus 156 ------~~~~~~~~~~~~aPE~~~~~~~--~~~~~Di~slG~i~~ 192 (286)
T cd07847 156 ------DYTDYVATRWYRAPELLVGDTQ--YGPPVDVWAIGCVFA 192 (286)
T ss_pred ------cccCcccccccCCHHHHhCCCC--cCchhhhHHHHHHHH
Confidence 1123567899999999876432 233599999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=254.82 Aligned_cols=175 Identities=23% Similarity=0.302 Sum_probs=148.0
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+|+..+.||+|+||.||+ ||||++.... ....+.+.+|+.++++++||||+++++++......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 478889999999999997 8999876543 33356789999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+ ++++. ...+++.++..++.||++|++|||+. +|+||||||+||++++++.++++|||++........
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-- 154 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-- 154 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC--
Confidence 9 88875 34589999999999999999999999 999999999999999999999999999987633211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......|+.+|+|||++.+... .+.++||||+||++|
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~--~~~~~Di~slG~~l~ 192 (286)
T cd07832 155 -----RLYSHQVATRWYRAPELLYGARK--YDPGVDLWAVGCIFA 192 (286)
T ss_pred -----CccccccCcccccCceeeecccc--CCchhHHHHHHHHHH
Confidence 11223568999999999876543 234699999999998
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=255.54 Aligned_cols=176 Identities=20% Similarity=0.292 Sum_probs=144.6
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh-hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQK-EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|++|.||+ ||||.+..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 46788999999999999996 89998764322 223457789999999999999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+.+ ++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 84 ~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 84 YLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 9974 553 24678999999999999999999999 99999999999999999999999999987542111
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|+|||++.+... ++.++||||+||++|
T Consensus 158 ------~~~~~~~~~~~~~aPE~~~~~~~--~~~~~Dv~slG~il~ 195 (291)
T cd07844 158 ------KTYSNEVVTLWYRPPDVLLGSTE--YSTSLDMWGVGCIFY 195 (291)
T ss_pred ------ccccccccccccCCcHHhhcCcc--cCcHHHHHHHHHHHH
Confidence 11122356889999999876432 233599999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=256.00 Aligned_cols=174 Identities=19% Similarity=0.244 Sum_probs=148.2
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 5678889999999999996 7888775432 33456789999999999999999999999999999999999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+++|++. ...+++..+..++.|++.|+.|||+.+ +|+||||||+||++++++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~---- 158 (284)
T cd06620 85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI---- 158 (284)
T ss_pred CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhc----
Confidence 9999985 346899999999999999999999743 89999999999999999999999999986542111
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....|+..|+|||++.+..++. ++||||+||++|
T Consensus 159 ------~~~~~~~~~~~aPE~~~~~~~~~---~~Di~slG~~l~ 193 (284)
T cd06620 159 ------ADTFVGTSTYMSPERIQGGKYTV---KSDVWSLGISII 193 (284)
T ss_pred ------cCccccCcccCCHHHHccCCCCc---cchHHHHHHHHH
Confidence 11356899999999998776554 599999999988
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-28 Score=261.96 Aligned_cols=185 Identities=19% Similarity=0.261 Sum_probs=153.0
Q ss_pred HHHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEec--
Q 041467 472 HAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSS-- 539 (746)
Q Consensus 472 ~~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~-- 539 (746)
++.+...++.|++.++||.|.+|.||+ +|||+.... ....++.+.|.++++.. +|||++.+||+|..
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 344445677899999999999999997 688876543 23345678888898887 59999999999875
Q ss_pred ---CCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcc
Q 041467 540 ---IDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGD 609 (746)
Q Consensus 540 ---~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 609 (746)
++.+|+|||||.+|+.- ...+.|+.+..|++++++|+.+||.. .++|||+|-.|||++.++.+|++|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEee
Confidence 45899999999999863 56789999999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCCCCcccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 610 LGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 610 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
||++..+.. +.....+.+||+.|||||++...+ -..++.++|+||+|++..
T Consensus 167 FGvSaQlds--------T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaI 219 (953)
T KOG0587|consen 167 FGVSAQLDS--------TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAI 219 (953)
T ss_pred eeeeeeeec--------ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceee
Confidence 999988732 223344588999999999998653 233466799999999765
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-29 Score=275.55 Aligned_cols=383 Identities=26% Similarity=0.331 Sum_probs=244.9
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 82 (746)
+|.+..+|.+++. +.+|+.|+++.|.|. ..|.+..++.+|++|+|.+|.+. ..|.++..+++|++|+++.|++ +.+
T Consensus 54 nn~~~~fp~~it~-l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f-~~~ 129 (1081)
T KOG0618|consen 54 NNQISSFPIQITL-LSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHF-GPI 129 (1081)
T ss_pred ccccccCCchhhh-HHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhcc-CCC
Confidence 4456777777765 577999999999997 78899999999999999999998 7999999999999999999998 667
Q ss_pred chhhcCCCCCCEEEccCCCCcC--------------------cccCCCCCC-EEeccCCCcc--cccCCCCCcEeeCccC
Q 041467 83 LTEICSLFKLERLRIDCGGRID--------------------SLGHLKSLL-LLSLAFNQFL--SLSNASSLEMIEFSRN 139 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~~~~--------------------~~~~l~~L~-~L~Ls~N~l~--~l~~l~~L~~L~Ls~N 139 (746)
|..+..++.++.+..++|..+. .......|+ .|+|.+|.+. .+.++.+|+.|..+.|
T Consensus 130 Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~~ldLr~N~~~~~dls~~~~l~~l~c~rn 209 (1081)
T KOG0618|consen 130 PLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTHQLDLRYNEMEVLDLSNLANLEVLHCERN 209 (1081)
T ss_pred chhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhheeeecccchhhhhhhhhccchhhhhhhhc
Confidence 7777666666666555431110 111122333 3788888774 3445556666666666
Q ss_pred cccccCCccccCCCCCCEEEccCCCCCCCCCCCc---------------cccccccCCCCCCEEEcccccccccCChhhh
Q 041467 140 QFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANEL---------------DFINLLTNCSKLERLYFNRNGFEGVLPHSIA 204 (746)
Q Consensus 140 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---------------~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 204 (746)
+++... -..++|+.|+.++|.+........ .+|++++.|.+|+.|+..+|+++ .+|..+.
T Consensus 210 ~ls~l~----~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~ 284 (1081)
T KOG0618|consen 210 QLSELE----ISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSNLPEWIGACANLEALNANHNRLV-ALPLRIS 284 (1081)
T ss_pred ccceEE----ecCcchheeeeccCcceeeccccccccceeeecchhhhhcchHHHHhcccceEecccchhHH-hhHHHHh
Confidence 554211 122445555555554432100000 13344444444444444444443 4444444
Q ss_pred hcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCC-CCCC-CCceeecccccccccc---ccccccc
Q 041467 205 NLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLI-GETP-NLQLLNIGGNHLQGSI---LSSLGNL 279 (746)
Q Consensus 205 ~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~-~L~~L~Ls~N~l~~~~---~~~l~~l 279 (746)
.+. +|+.|....|.+. -+|.....++.|+.|+|..|++. .+|+.+ .-+. +|..|+.+.|.+.... -.....|
T Consensus 285 ~~~-~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~L 361 (1081)
T KOG0618|consen 285 RIT-SLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAAL 361 (1081)
T ss_pred hhh-hHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHH
Confidence 444 3444444444444 23444444444555555555443 222221 1111 1344444444443211 0122334
Q ss_pred ChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchh-hhhcccccceEEccCccccccCchhhhcccCCcee---
Q 041467 280 TLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQ-ILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRL--- 355 (746)
Q Consensus 280 ~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L--- 355 (746)
+.|.+.+|.++...-+.+.+...|+.|+|++|+|. .+|.. +.++..| +.|+||+|+++ .+|.++.+++.|++|
T Consensus 362 q~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~L-eeL~LSGNkL~-~Lp~tva~~~~L~tL~ah 438 (1081)
T KOG0618|consen 362 QELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEEL-EELNLSGNKLT-TLPDTVANLGRLHTLRAH 438 (1081)
T ss_pred HHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHh-HHHhcccchhh-hhhHHHHhhhhhHHHhhc
Confidence 55556688898888788899999999999999997 67765 4566666 68999999998 899999999999988
Q ss_pred -----ecCCCCCCCCCCCEEEccCCcCcccCCCCCc-cCCCCeeeEecCCCc
Q 041467 356 -----HIPEYPENLSFFELLNLSYNYFGSEVPTKGV-FNNKTRFSIIGNGKL 401 (746)
Q Consensus 356 -----~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~-~~~~~~~~~~~n~~l 401 (746)
.+| .+..++.|+.+|+|.|+++...-.... ..++..++++||.++
T Consensus 439 sN~l~~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 439 SNQLLSFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred CCceeech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 346 567899999999999999865432222 378899999999864
|
|
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-28 Score=247.75 Aligned_cols=171 Identities=23% Similarity=0.341 Sum_probs=141.5
Q ss_pred CeEeecCCeeEEE--------EEeehhhhhhh-hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCccc
Q 041467 486 NKIREGGFNIVYN--------VAMKVANLKQK-EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR 556 (746)
Q Consensus 486 ~~ig~g~~g~v~~--------vavK~~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~ 556 (746)
+.||+|+||.||+ ||+|++..... ...+.+.+|++++++++||||+++++++......++||||++++++.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 4689999999996 88898764432 24567899999999999999999999999999999999999999875
Q ss_pred ------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccc
Q 041467 557 ------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630 (746)
Q Consensus 557 ------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~ 630 (746)
...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++........ ..
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~------~~ 151 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT------VS 151 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcce------ec
Confidence 34578899999999999999999999 9999999999999999999999999999765321110 00
Q ss_pred cccccccccccccccccccccccCCCccceeeccceee
Q 041467 631 SIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 631 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....++..|+|||++.+..++. ++||||+||++|
T Consensus 152 ~~~~~~~~~y~~PE~~~~~~~~~---~~Di~slG~i~~ 186 (251)
T cd05041 152 DGLKQIPIKWTAPEALNYGRYTS---ESDVWSYGILLW 186 (251)
T ss_pred cccCcceeccCChHhhccCCCCc---chhHHHHHHHHH
Confidence 01123466799999998776654 599999999998
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-28 Score=249.47 Aligned_cols=173 Identities=21% Similarity=0.332 Sum_probs=146.3
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 478889999999999996 8899876432 23456789999999999999999999999998999999999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC-CcEEEccccccccccCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~-~~~ki~DfGla~~~~~~~~ 621 (746)
++++++. ...+++..+..++.|+++|++|||++ +|+||||||+||+++++ +.+|++|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 9999875 23478999999999999999999999 99999999999999854 568999999998763221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||.+.+..++. ++||||+||++|
T Consensus 157 --------~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slG~~l~ 192 (256)
T cd08220 157 --------KAYTVVGTPCYISPELCEGKPYNQ---KSDIWALGCVLY 192 (256)
T ss_pred --------cccccccCCcccCchhccCCCCCc---ccchHHHHHHHH
Confidence 112356889999999998776554 499999999988
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-28 Score=257.78 Aligned_cols=219 Identities=20% Similarity=0.256 Sum_probs=161.9
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.|+..+.||+|+||.||+ ||+|++... ..+..+.+.+|++++++++|||||++++++.+....++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 377788999999999996 889987533 22334578899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+.+..+. ...+++.++..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 106 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~----- 177 (317)
T cd06635 106 YCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASP----- 177 (317)
T ss_pred CCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCC-----
Confidence 99753222 45689999999999999999999999 999999999999999999999999999865421
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhc--cccCCCccH
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKS--AGIKGKKTV 690 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~--~~~~~~~~~ 690 (746)
.....|+..|+|||++........+.++||||+||++|...... ...+... .........
T Consensus 178 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (317)
T cd06635 178 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWS 250 (317)
T ss_pred -------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCcccc
Confidence 11246889999999985432222345699999999988221111 0011111 111122333
Q ss_pred HHHHHhhCCCCCCCCC-CCCccchh
Q 041467 691 SFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 691 ~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
+.+..++.+|+...|. ||+..++.
T Consensus 251 ~~l~~li~~~l~~~p~~Rpt~~~il 275 (317)
T cd06635 251 DYFRNFVDSCLQKIPQDRPTSEELL 275 (317)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHH
Confidence 4555666666666666 77776554
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-28 Score=251.56 Aligned_cols=173 Identities=25% Similarity=0.335 Sum_probs=149.7
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
+|+..+.||.|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 478889999999999997 8999886543 2346789999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+.++++. ...+++.++..++.|+++|++|||+. +|+|+||||+||++++++.++++|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--- 154 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--- 154 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc---
Confidence 99999886 34789999999999999999999999 99999999999999999999999999987653221
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||++....++. ++||||+||++|
T Consensus 155 ------~~~~~~~~~~y~~PE~~~~~~~~~---~~Di~slG~~l~ 190 (258)
T cd05578 155 ------LTTSTSGTPGYMAPEVLCRQGYSV---AVDWWSLGVTAY 190 (258)
T ss_pred ------cccccCCChhhcCHHHHcccCCCC---cccchhhHHHHH
Confidence 122356889999999998776554 599999999998
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=251.20 Aligned_cols=218 Identities=22% Similarity=0.301 Sum_probs=158.5
Q ss_pred CeEeecCCeeEEE---------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 486 NKIREGGFNIVYN---------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+.||+|+||.||+ ||||.+.... ......+.+|+.+++.++||||+++++++...+..+++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 3689999999995 5666664332 23456788999999999999999999999999999999999
Q ss_pred ccCCccc------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC-----cEEEccccc
Q 041467 550 ISNGQLR------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV-----VTHVGDLGL 612 (746)
Q Consensus 550 ~~~g~l~------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~-----~~ki~DfGl 612 (746)
+++|++. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++ .+|++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999885 12368899999999999999999998 999999999999999877 899999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--cccc------cchhh----
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQN------KSILK---- 680 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~~------~~i~~---- 680 (746)
++.+....... ......++..|+|||++.+..++. ++|||||||++|... .... .....
T Consensus 158 ~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~ 228 (269)
T cd05044 158 ARDIYKSDYYR------KEGEGLLPVRWMAPESLLDGKFTT---QSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA 228 (269)
T ss_pred ccccccccccc------cCcccCCCccccCHHHHccCCccc---chhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc
Confidence 98653321110 111234578899999998777654 499999999998321 1110 00000
Q ss_pred -ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhh
Q 041467 681 -SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTL 715 (746)
Q Consensus 681 -~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~ 715 (746)
............+..++..|+...|+ ||++.++..
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 229 GGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred CCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00111122334455566666666666 777776543
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-28 Score=239.42 Aligned_cols=213 Identities=19% Similarity=0.227 Sum_probs=167.5
Q ss_pred cCCCCCCeEeecCCeeE------EE--EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC------cc
Q 041467 480 NNFSPANKIREGGFNIV------YN--VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID------FE 543 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v------~~--vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------~~ 543 (746)
.+|.....+|.|.-..| .. ||+|++... .....++..||..++..++|+|||+++.+|.-.. ..
T Consensus 17 ~Ry~nL~p~~~g~~~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQIVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeeecccCCCCceEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 45666666666665222 22 899987543 2345677899999999999999999999987643 68
Q ss_pred cchhhhccCCccc---ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 544 GFDFKAISNGQLR---LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 544 ~lv~e~~~~g~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|+|||+|... +. ...++......+..|+++|++|+|+. +|+||||||+||++..++.+||.|||+|+.-.
T Consensus 97 y~v~e~m~~n-l~~vi~~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~--- 169 (369)
T KOG0665|consen 97 YLVMELMDAN-LCQVILMELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTED--- 169 (369)
T ss_pred HHHHHhhhhH-HHHHHHHhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccC---
Confidence 9999999543 32 45678899999999999999999999 99999999999999999999999999998631
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee-----------ccccccccchhhccccCCCcc
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA-----------LNEKKQNKSILKSAGIKGKKT 689 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~-----------~~~~~~~~~i~~~~~~~~~~~ 689 (746)
.....+.++.|..|+|||++.+..+.+. +||||.||+++ ....+|..++.+..+++++..
T Consensus 170 ------~~~~mtpyVvtRyyrapevil~~~~ke~---vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F 240 (369)
T KOG0665|consen 170 ------TDFMMTPYVVTRYYRAPEVILGMGYKEN---VDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSF 240 (369)
T ss_pred ------cccccCchhheeeccCchheeccCCccc---chhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHH
Confidence 1234566899999999999999987666 99999999998 556677778888889998877
Q ss_pred HHHHHHhhCCCCCCCCCCC
Q 041467 690 VSFFLSLLSPSCSVFPLTP 708 (746)
Q Consensus 690 ~~~~~~~~~~~~~~~p~~p 708 (746)
.+.+......-...+|+..
T Consensus 241 ~~qL~~~~r~yv~~~~~y~ 259 (369)
T KOG0665|consen 241 MKQLQPTVRNYVENRPQYQ 259 (369)
T ss_pred HHHhhHHHHHHhhcChHhh
Confidence 7666654443333444433
|
|
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.6e-28 Score=250.46 Aligned_cols=175 Identities=22% Similarity=0.268 Sum_probs=151.2
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
++|+..+.||.|++|.||+ ||+|++.... ......+.+|+++++.++||||+++++++.+....++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 3688889999999999996 8999886543 33456788999999999999999999999999999999999
Q ss_pred ccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 550 ISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 550 ~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
++++++. ...+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++++|||+++.+.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~---- 153 (274)
T cd06609 81 CGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS---- 153 (274)
T ss_pred eCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccccc----
Confidence 9999886 34789999999999999999999999 999999999999999999999999999987643211
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||++.+..++. ++|||||||++|
T Consensus 154 ----~~~~~~~~~~y~~PE~~~~~~~~~---~sDv~slG~il~ 189 (274)
T cd06609 154 ----KRNTFVGTPFWMAPEVIKQSGYDE---KADIWSLGITAI 189 (274)
T ss_pred ----ccccccCCccccChhhhccCCCCc---hhhHHHHHHHHH
Confidence 122356889999999998877654 599999999998
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.9e-28 Score=251.34 Aligned_cols=174 Identities=21% Similarity=0.291 Sum_probs=148.4
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
.|...+.||+|++|.||+ ||+|++........+.+.+|+.+++.++||||+++++++...+..++++||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 355567999999999996 89998765444445668899999999999999999999999999999999999
Q ss_pred CCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 552 NGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 552 ~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
++++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++++|||.+........
T Consensus 100 ~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~------ 170 (285)
T cd06648 100 GGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP------ 170 (285)
T ss_pred CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCc------
Confidence 99886 34688999999999999999999999 999999999999999999999999999876532211
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||++.+..++. ++||||+||++|
T Consensus 171 --~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slGv~l~ 206 (285)
T cd06648 171 --RRKSLVGTPYWMAPEVISRLPYGT---EVDIWSLGIMVI 206 (285)
T ss_pred --ccccccCCccccCHHHhcCCCCCC---cccHHHHHHHHH
Confidence 112356899999999998776654 499999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-28 Score=259.26 Aligned_cols=178 Identities=22% Similarity=0.270 Sum_probs=144.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----cc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSID-----FE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~-----~~ 543 (746)
.++|+..+.||+|+||.||+ ||||++... ......++.+|+.++++++||||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46899999999999999996 899988532 2334556889999999999999999999876543 46
Q ss_pred cchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 544 GFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 544 ~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
++++||+.+ ++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred EEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 899999975 333 45689999999999999999999999 9999999999999999999999999999865332
Q ss_pred CCCCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
... ........||..|||||++.+. .++ .++||||+||++|
T Consensus 160 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~---~~~DvwslGvil~ 201 (336)
T cd07849 160 HDH-----TGFLTEYVATRWYRAPEIMLNSKGYT---KAIDIWSVGCILA 201 (336)
T ss_pred ccc-----cCCcCCcCcCCCccChHHhhCCCCCC---cHHHHHHHHHHHH
Confidence 211 1122346789999999987654 343 4599999999998
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-28 Score=253.98 Aligned_cols=178 Identities=19% Similarity=0.239 Sum_probs=143.6
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~e 548 (746)
++|+..+.||+|+||.||+ ||+|++.... ......+.+|+.++.++. |||||++++++...+..+++||
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 3566778999999999996 8999886543 234567899999999996 9999999999999888999999
Q ss_pred hccCC--ccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 549 AISNG--QLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 549 ~~~~g--~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
|+... ++. ...+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 84 ~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 84 LMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred cccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 98642 111 246899999999999999999999743 8999999999999999999999999999765322
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......|+..|+|||++.+.....++.++||||+||++|
T Consensus 162 ~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ 201 (288)
T cd06616 162 I---------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLY 201 (288)
T ss_pred C---------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHH
Confidence 1 112246889999999998662122344699999999988
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.9e-28 Score=248.29 Aligned_cols=181 Identities=25% Similarity=0.354 Sum_probs=151.4
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhhh--hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+|...+.||+|+||.||+ ||+|++..... ...+.+.+|+.++++++||||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 477889999999999997 78998765433 3567899999999999999999999999999999999999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
++++++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++..........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~- 156 (264)
T cd06626 81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM- 156 (264)
T ss_pred CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-
Confidence 9999886 33478999999999999999999999 99999999999999999999999999998764332211
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
........|+..|+|||++.+......+.++|||||||++|
T Consensus 157 ---~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~ 197 (264)
T cd06626 157 ---GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVL 197 (264)
T ss_pred ---cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHH
Confidence 01012356889999999998765222355699999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-29 Score=247.51 Aligned_cols=176 Identities=21% Similarity=0.263 Sum_probs=150.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~l 545 (746)
..+|..+.+||+|+||+|.. +|||++++. +....+--..|-++|+.-. -|.++++..+|+..+..|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 35788999999999999985 999998754 2333444566778887764 6899999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||+.+|+|- ...+.+..+..+|.+||-||-|||++ +|+.||||..|||+|.+|++||+|||+++.--
T Consensus 428 VMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni--- 501 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI--- 501 (683)
T ss_pred EEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccc---
Confidence 99999999985 45789999999999999999999999 99999999999999999999999999998631
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+.+++||+.|+|||++...+|+. .+|+|||||++|
T Consensus 502 -----~~~~TTkTFCGTPdYiAPEIi~YqPYgk---svDWWa~GVLLy 541 (683)
T KOG0696|consen 502 -----FDGVTTKTFCGTPDYIAPEIIAYQPYGK---SVDWWAFGVLLY 541 (683)
T ss_pred -----cCCcceeeecCCCcccccceEEeccccc---chhHHHHHHHHH
Confidence 1223455699999999999998777654 599999999999
|
|
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-28 Score=250.69 Aligned_cols=175 Identities=21% Similarity=0.287 Sum_probs=147.4
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCC---CCceeeEEEEEecCCcccchh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIR---HRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~---HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++ ||||+++++++......+++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477889999999999997 8999876432 334567889999999997 999999999999988999999
Q ss_pred hhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 548 KAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 548 e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
||++++++. ...+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++++|||++........
T Consensus 82 e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-- 156 (277)
T cd06917 82 EYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS-- 156 (277)
T ss_pred ecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc--
Confidence 999999875 45789999999999999999999999 999999999999999999999999999987643221
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||.+.+... .+.++|||||||++|
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~~~~--~~~~~Dv~slG~~l~ 193 (277)
T cd06917 157 ------KRSTFVGTPYWMAPEVITEGKY--YDTKADIWSLGITIY 193 (277)
T ss_pred ------ccccccCCcceeCHHHhccCCc--cccchhHHHHHHHHH
Confidence 1223568999999999875432 233599999999998
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-28 Score=253.51 Aligned_cols=174 Identities=24% Similarity=0.372 Sum_probs=144.2
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+|+..+.||.|++|.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 478889999999999997 8999876432 22335688999999999999999999999999999999999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
+. +.+. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++......
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-- 154 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-- 154 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc--
Confidence 96 4443 34678999999999999999999999 99999999999999999999999999987653211
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|+|||++.+... .+.++|||||||++|
T Consensus 155 ------~~~~~~~~~~~y~aPE~~~~~~~--~~~~~Dv~slG~il~ 192 (284)
T cd07860 155 ------RTYTHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFA 192 (284)
T ss_pred ------cccccccccccccCCeEEecCCC--CCcHHHHHHHHHHHH
Confidence 11123457889999999876543 234699999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=246.37 Aligned_cols=179 Identities=23% Similarity=0.299 Sum_probs=150.3
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
++|+..+.||.|+||.||+ ||+|++.... ....+.+.+|+++++.++||||+++++.+...+..++++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 4688999999999999996 7889876432 23456789999999999999999999999999999999999
Q ss_pred ccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 550 ISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
++++++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 9999875 13578999999999999999999999 999999999999999999999999999987644322
Q ss_pred CCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
.. ........|+..|+|||++... .+ +.++|||||||++|
T Consensus 158 ~~----~~~~~~~~~~~~y~~Pe~~~~~~~~---~~~~Dv~slG~i~~ 198 (267)
T cd06610 158 RT----RKVRKTFVGTPCWMAPEVMEQVHGY---DFKADIWSFGITAI 198 (267)
T ss_pred cc----ccccccccCChhhcChHHHccccCc---CcccchHhHhHHHH
Confidence 11 0112335789999999998876 34 34699999999998
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.9e-28 Score=251.37 Aligned_cols=176 Identities=24% Similarity=0.329 Sum_probs=149.9
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
++|+..+.||+|++|.||+ ||||++.... ....+.+.+|++++++++||||+++++++...+..+++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 3688899999999999997 8999886542 3345678999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|++++.+. ...+++.++..++.||+.|++|||+. +|+|||+||+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-- 155 (288)
T cd07833 81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-- 155 (288)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--
Confidence 99987664 34588999999999999999999999 999999999999999999999999999987643221
Q ss_pred Cccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
.......|+..|+|||++.+. .++ .++||||+||++|
T Consensus 156 -----~~~~~~~~~~~~~~PE~~~~~~~~~---~~~Dv~slG~~l~ 193 (288)
T cd07833 156 -----SPLTDYVATRWYRAPELLVGDTNYG---KPVDVWAIGCIMA 193 (288)
T ss_pred -----ccccCcccccCCcCCchhcCCCCcC---chhhHHHHHHHHH
Confidence 112236788999999999877 444 4599999999988
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-28 Score=253.51 Aligned_cols=182 Identities=21% Similarity=0.239 Sum_probs=131.9
Q ss_pred cCCCCCCeEeecCCeeEEE------------EEeehhhhhhhhh-----------hHHHHHHHHHhhcCCCCceeeEEEE
Q 041467 480 NNFSPANKIREGGFNIVYN------------VAMKVANLKQKEA-----------SRSFAAEFNALRNIRHRNLIKIITI 536 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~HpnIv~l~~~ 536 (746)
.+|...+.||+|+||.||+ +|+|+........ ......+...+..++|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5789999999999999997 3555432221110 1112344456677899999999997
Q ss_pred EecCC----cccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEc
Q 041467 537 CSSID----FEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608 (746)
Q Consensus 537 ~~~~~----~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 608 (746)
+.... ..+++++++...... ....++..+..++.|++.|++|||+. +|+||||||+|||++.++.+||+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~~l~ 168 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYII 168 (294)
T ss_pred eeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcEEEE
Confidence 66543 235566665332111 22467888999999999999999999 99999999999999999999999
Q ss_pred cccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 609 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|||+|+.......... ..........||+.|+|||+..+..++.+ +||||+||++|
T Consensus 169 DFGla~~~~~~~~~~~-~~~~~~~~~~gt~~y~ape~~~~~~~~~~---~DiwSlG~~l~ 224 (294)
T PHA02882 169 DYGIASHFIIHGKHIE-YSKEQKDLHRGTLYYAGLDAHNGACVTRR---GDLESLGYCML 224 (294)
T ss_pred EcCCceeeccCCcccc-cccccccccCCCccccCHHHhCCCCCCcH---HHHHHHHHHHH
Confidence 9999987643221110 01112233579999999999988877554 99999999988
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-28 Score=251.18 Aligned_cols=172 Identities=20% Similarity=0.271 Sum_probs=139.2
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCC-CCceeeEEEEEecC--Ccccchhh
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIR-HRNLIKIITICSSI--DFEGFDFK 548 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~--~~~~lv~e 548 (746)
|+..+.||+|+||.||+ ||+|++.... ........+|+.+++++. ||||+++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 56778999999999997 8999876542 222234557999999986 99999999999987 78999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+.++.+. ...+++.++..++.|++.||+|||+. +|+||||||+||++++ +.+||+|||+++.+.....
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~-- 154 (282)
T cd07831 81 LMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP-- 154 (282)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCCC--
Confidence 99754332 24589999999999999999999999 9999999999999999 9999999999987632211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....++..|+|||++..... .+.++||||+||++|
T Consensus 155 -------~~~~~~~~~y~aPE~~~~~~~--~~~~~Di~slGv~l~ 190 (282)
T cd07831 155 -------YTEYISTRWYRAPECLLTDGY--YGPKMDIWAVGCVFF 190 (282)
T ss_pred -------cCCCCCCcccCChhHhhcCCC--CCcchhHHHHHHHHH
Confidence 122567899999998765432 234699999999998
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-28 Score=252.69 Aligned_cols=179 Identities=19% Similarity=0.283 Sum_probs=151.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--------hhhhHHHHHHHHHhhcCC---CCceeeEEEEE
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--------KEASRSFAAEFNALRNIR---HRNLIKIITIC 537 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---HpnIv~l~~~~ 537 (746)
...+|+..+.+|+|+||.|+. |.||.+.+.+ .......-.||++|..++ ||||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 345789999999999999985 8999886543 111234668999999998 99999999999
Q ss_pred ecCCcccchhhhccCC-ccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 538 SSIDFEGFDFKAISNG-QLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 538 ~~~~~~~lv~e~~~~g-~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
+++++.|++||-...| +|. +..+++.++..|++||+-|+++||++ +|||||||-+||.+|.+|-+|++|||
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeecc
Confidence 9999999999976444 222 56789999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE 671 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~ 671 (746)
.|..... .....++||..|.|||++.|.+|- +++-|||++|+++|...
T Consensus 716 saa~~ks----------gpfd~f~gtv~~aapevl~g~~y~--gk~qdiwalgillytiv 763 (772)
T KOG1152|consen 716 SAAYTKS----------GPFDVFVGTVDYAAPEVLGGEKYL--GKPQDIWALGILLYTIV 763 (772)
T ss_pred chhhhcC----------CCcceeeeeccccchhhhCCCccC--CCcchhhhhhheeeEEE
Confidence 9876422 123358999999999999999885 44899999999999433
|
|
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-27 Score=245.59 Aligned_cols=178 Identities=19% Similarity=0.351 Sum_probs=146.5
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh----------hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ----------KEASRSFAAEFNALRNIRHRNLIKIITICSSID 541 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~----------~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~ 541 (746)
+|...+.||+|+||.||+ ||+|.+.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467788999999999996 8999875321 112346889999999999999999999999999
Q ss_pred cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 542 FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
..++||||+++|++. ...+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+|++|||+++..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 999999999999885 35688999999999999999999999 9999999999999999999999999999764
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ........|+..|+|||++.... ...+.++||||+||++|
T Consensus 159 ~~~~~------~~~~~~~~~~~~y~~PE~~~~~~-~~~~~~~Dv~slG~~l~ 203 (272)
T cd06629 159 DDIYD------NDQNMSMQGSVFWMAPEVIHSYS-QGYSAKVDIWSLGCVVL 203 (272)
T ss_pred ccccc------ccccccccCCccccCHHHhcccc-CCCCccchhHHHHHHHH
Confidence 32111 01122356889999999987654 11244699999999988
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.5e-28 Score=253.15 Aligned_cols=176 Identities=21% Similarity=0.292 Sum_probs=145.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--hhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccccc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITICSSI--DFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~~l 545 (746)
.++|+..+.||+|+||.||+ ||+|.++.... .....+.+|+.++++++||||+++++++... ...++
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 35788999999999999997 88998864432 2234577899999999999999999999887 78999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
++||+.+ ++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 v~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 84 VMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred EehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 9999974 553 23589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. ......++..|+|||++.+... .+.++||||+||++|
T Consensus 160 ~~--------~~~~~~~~~~~~aPE~~~~~~~--~~~~~Di~slG~~l~ 198 (293)
T cd07843 160 LK--------PYTQLVVTLWYRAPELLLGAKE--YSTAIDMWSVGCIFA 198 (293)
T ss_pred cc--------ccccccccccccCchhhcCCcc--ccchhhHHHHHHHHH
Confidence 11 1123457889999999876543 234599999999988
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-27 Score=247.87 Aligned_cols=174 Identities=21% Similarity=0.274 Sum_probs=148.0
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
-|+..+.||+|+||.||+ ||||+..... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 467788999999999996 8999875432 233467889999999999999999999999999999999999
Q ss_pred cCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcc
Q 041467 551 SNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626 (746)
Q Consensus 551 ~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~ 626 (746)
++|++. ...+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++++|||++..+.....
T Consensus 85 ~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~----- 156 (277)
T cd06641 85 GGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI----- 156 (277)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchh-----
Confidence 998875 45689999999999999999999998 999999999999999999999999999876532211
Q ss_pred cccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 627 TASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 627 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||.+.+...+. ++||||+||++|
T Consensus 157 ---~~~~~~~~~~y~~PE~~~~~~~~~---~~Dv~slG~~l~ 192 (277)
T cd06641 157 ---KRNTFVGTPFWMAPEVIKQSAYDS---KADIWSLGITAI 192 (277)
T ss_pred ---hhccccCCccccChhhhccCCCCc---hhhHHHHHHHHH
Confidence 112256889999999998766654 499999999988
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-27 Score=248.53 Aligned_cols=166 Identities=24% Similarity=0.335 Sum_probs=140.5
Q ss_pred EeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCcc
Q 041467 488 IREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL 555 (746)
Q Consensus 488 ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l 555 (746)
||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||++++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999996 8899876432 22344577899999999999999999999999999999999999988
Q ss_pred c-----c--cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccc
Q 041467 556 R-----L--CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628 (746)
Q Consensus 556 ~-----~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~ 628 (746)
. . ..+++.++..++.|++.|+.|||+. +|+||||||+||++++++.+|++|||+++.....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--------- 148 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--------- 148 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC---------
Confidence 5 2 2689999999999999999999999 9999999999999999999999999998765321
Q ss_pred cccccccccccccccccccccccccCCCccceeeccceee
Q 041467 629 SSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 629 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......|+..|+|||++.+..++. ++||||+||++|
T Consensus 149 ~~~~~~~~~~~y~~PE~~~~~~~~~---~~Di~slG~il~ 185 (277)
T cd05577 149 KKIKGRAGTPGYMAPEVLQGEVYDF---SVDWFALGCTLY 185 (277)
T ss_pred CccccccCCCCcCCHHHhcCCCCCc---hhhhHHHHHHHH
Confidence 1112346788999999998776544 599999999988
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-27 Score=253.16 Aligned_cols=173 Identities=24% Similarity=0.298 Sum_probs=143.0
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
..|+..+.||+|+||.||+ ||+|.+... .....+++.+|+++++.++||||+++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 3477788999999999996 788887532 2233456889999999999999999999999999999999
Q ss_pred hhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 548 KAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 548 e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||+. |++. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++.....
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~--- 167 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--- 167 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecC---
Confidence 9997 4442 34588999999999999999999999 999999999999999999999999999876421
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....|+..|+|||++.+......+.++|||||||++|
T Consensus 168 ---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ 205 (308)
T cd06634 168 ---------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205 (308)
T ss_pred ---------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHH
Confidence 11256889999999986432222345699999999998
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-27 Score=243.73 Aligned_cols=174 Identities=25% Similarity=0.426 Sum_probs=145.9
Q ss_pred CCCCCeEeecCCeeEEE-------------EEeehhhhhhhh-hhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 482 FSPANKIREGGFNIVYN-------------VAMKVANLKQKE-ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~-------------vavK~~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++..+.||.|+||.||+ ||+|++...... ..+.+.+|+++++.++||||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 35678999999999985 788888654332 5668999999999999999999999999999999999
Q ss_pred hhccCCccc-----ccC--CCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 548 KAISNGQLR-----LCN--LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 548 e~~~~g~l~-----~~~--l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||++++++. ... +++.++..++.|++.|++|||+. +++||||||+||++++++.++++|||+++......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 999999885 122 89999999999999999999999 99999999999999999999999999998764332
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... .....++..|+|||.+.+..++. ++||||+||++|
T Consensus 158 ~~~-------~~~~~~~~~y~~Pe~~~~~~~~~---~~Di~slG~i~~ 195 (258)
T smart00219 158 YYK-------KKGGKLPIRWMAPESLKDGKFTS---KSDVWSFGVLLW 195 (258)
T ss_pred ccc-------cccCCCcccccChHHhccCCCCc---chhHHHHHHHHH
Confidence 111 00123678999999997665544 599999999988
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=244.80 Aligned_cols=178 Identities=20% Similarity=0.305 Sum_probs=147.1
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhh-----hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-----QKEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFE 543 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~-----~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~ 543 (746)
.+|+..+.||+|+||.||+ ||+|++... ..+..+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999997 899986432 233456789999999999999999999998764 357
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
++++||++++++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||+++....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence 8899999999885 34578999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... ........|+..|+|||++.+..++. ++|||||||++|
T Consensus 159 ~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 200 (264)
T cd06653 159 ICMS-----GTGIKSVTGTPYWMSPEVISGEGYGR---KADVWSVACTVV 200 (264)
T ss_pred cccc-----CccccccCCcccccCHhhhcCCCCCc---cccHHHHHHHHH
Confidence 1110 11122356899999999998876654 499999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-27 Score=245.58 Aligned_cols=175 Identities=20% Similarity=0.319 Sum_probs=151.0
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhh-hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQK-EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
++|+..+.||+|++|.||+ ||||++..... ...+.+.+|++++++++||||+++++++......+++|||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 3688899999999999997 88898765433 4456799999999999999999999999999999999999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRH-HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++++++. ...+++..+..++.|+++|++|+|+ . +++||||+|+||+++.++.++++|||++.........
T Consensus 81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~- 156 (264)
T cd06623 81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ- 156 (264)
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCCc-
Confidence 9999886 3568999999999999999999999 8 9999999999999999999999999999876332211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....|+..|+|||.+.+..++. ++|||||||++|
T Consensus 157 -------~~~~~~~~~y~~pE~~~~~~~~~---~~Dv~slG~il~ 191 (264)
T cd06623 157 -------CNTFVGTVTYMSPERIQGESYSY---AADIWSLGLTLL 191 (264)
T ss_pred -------ccceeecccccCHhhhCCCCCCc---hhhHHHHHHHHH
Confidence 12356889999999988775544 599999999998
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.9e-28 Score=252.13 Aligned_cols=171 Identities=22% Similarity=0.277 Sum_probs=146.1
Q ss_pred CCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCc
Q 041467 484 PANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQ 554 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~ 554 (746)
....||+|+||.||+ ||||++..........+.+|+.+++.++||||+++++++...+..+++|||+++++
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence 346799999999996 89998765444455678999999999999999999999999999999999999998
Q ss_pred cc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccc
Q 041467 555 LR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630 (746)
Q Consensus 555 l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~ 630 (746)
+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++........ .
T Consensus 104 L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--------~ 172 (292)
T cd06657 104 LTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--------R 172 (292)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccc--------c
Confidence 86 44689999999999999999999999 999999999999999999999999999876532211 1
Q ss_pred cccccccccccccccccccccccCCCccceeeccceee
Q 041467 631 SIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 631 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....|+..|+|||++.+..++. ++||||+||++|
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~---~~Dv~slGvil~ 207 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGP---EVDIWSLGIMVI 207 (292)
T ss_pred ccccccCccccCHHHhcCCCCCc---hhhHHHHHHHHH
Confidence 12356899999999987766654 599999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-27 Score=249.50 Aligned_cols=177 Identities=22% Similarity=0.244 Sum_probs=146.0
Q ss_pred CCCCCCeEeecCCeeEEE------------EEeehhhhhh----hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcc
Q 041467 481 NFSPANKIREGGFNIVYN------------VAMKVANLKQ----KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFE 543 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~------------vavK~~~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~ 543 (746)
+|+..+.||+|+||.||. ||+|++.... ....+.+.+|+++++++ +||||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999995 7899876432 22345688999999999 599999999999998899
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
++||||+++|++. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++++||+|||+++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence 9999999999885 34588999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... .......|+..|+|||.+.+... ..+.++||||+||++|
T Consensus 158 ~~~-------~~~~~~~~~~~y~aPE~~~~~~~-~~~~~~Dv~slG~~l~ 199 (290)
T cd05613 158 DEV-------ERAYSFCGTIEYMAPDIVRGGDG-GHDKAVDWWSMGVLMY 199 (290)
T ss_pred ccc-------cccccccCCcccCChhhccCCCC-CCCccccHHHHHHHHH
Confidence 211 11223568999999999875421 1234699999999998
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-27 Score=248.30 Aligned_cols=166 Identities=25% Similarity=0.286 Sum_probs=134.0
Q ss_pred eEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHH---hhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 487 KIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNA---LRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 487 ~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~---l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
.||+|+||.||+ ||+|++.... ......+.+|..+ +...+||||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 479999999996 8999875432 1122234445443 344579999999999999999999999999
Q ss_pred CCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcc
Q 041467 552 NGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626 (746)
Q Consensus 552 ~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~ 626 (746)
+|++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|||++.......
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~------ 151 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------ 151 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC------
Confidence 99985 45689999999999999999999999 99999999999999999999999999987542211
Q ss_pred cccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 627 TASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 627 ~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....||..|+|||.+.. ..++ .++||||+||++|
T Consensus 152 ----~~~~~~~~~y~aPE~~~~~~~~~---~~~Di~slG~~l~ 187 (279)
T cd05633 152 ----PHASVGTHGYMAPEVLQKGTAYD---SSADWFSLGCMLF 187 (279)
T ss_pred ----ccCcCCCcCccCHHHhcCCCCCC---chhhhHHHHHHHH
Confidence 122468999999999864 3343 4599999999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=246.37 Aligned_cols=174 Identities=24% Similarity=0.372 Sum_probs=144.4
Q ss_pred CCCCCCeEeecCCeeEEE----------EEeehhhhh----------hhhhhHHHHHHHHHhhc-CCCCceeeEEEEEec
Q 041467 481 NFSPANKIREGGFNIVYN----------VAMKVANLK----------QKEASRSFAAEFNALRN-IRHRNLIKIITICSS 539 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~----------vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~HpnIv~l~~~~~~ 539 (746)
+|+..+.||+|+||.||+ +|+|.+... ......++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 478889999999999996 788876432 12234567789988865 799999999999999
Q ss_pred CCcccchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccc
Q 041467 540 IDFEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~Df 610 (746)
.+..+++|||++++++. ...+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999998874 245789999999999999999999632 8999999999999999999999999
Q ss_pred cccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 611 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|++....... ......|+..|+|||++.+..++. ++|||||||++|
T Consensus 159 g~~~~~~~~~---------~~~~~~~~~~~~~Pe~~~~~~~~~---~~Dv~slG~ll~ 204 (269)
T cd08528 159 GLAKQKQPES---------KLTSVVGTILYSCPEIVKNEPYGE---KADVWAFGCILY 204 (269)
T ss_pred cceeeccccc---------ccccccCcccCcChhhhcCCCCch---HHHHHHHHHHHH
Confidence 9998653221 123356899999999998776654 499999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-27 Score=249.63 Aligned_cols=177 Identities=21% Similarity=0.251 Sum_probs=145.9
Q ss_pred CCCCCCeEeecCCeeEEE------------EEeehhhhhh----hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcc
Q 041467 481 NFSPANKIREGGFNIVYN------------VAMKVANLKQ----KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFE 543 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~------------vavK~~~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~ 543 (746)
+|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367789999999999995 7889876432 23345688999999999 599999999999998899
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
++||||+++|++. ...+++..+..++.|+++|++|||+. +++||||||+||+++.++.++++|||+++....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence 9999999999885 35688999999999999999999998 999999999999999999999999999877533
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... .......|+..|+|||.+.+.... .+.++||||+||++|
T Consensus 158 ~~~-------~~~~~~~~~~~y~aPE~~~~~~~~-~~~~~Dv~slG~il~ 199 (288)
T cd05583 158 EEE-------ERAYSFCGTIEYMAPEVIRGGSGG-HDKAVDWWSLGVLTF 199 (288)
T ss_pred ccc-------cccccccCCccccCHHHhcCCCCC-CcchhhhHHHHHHHH
Confidence 211 111235689999999998765411 234599999999988
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.4e-28 Score=248.72 Aligned_cols=173 Identities=20% Similarity=0.287 Sum_probs=148.5
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++......++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 3678889999999999997 7888876543 34456789999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRH-HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
++++++. ...+++..+..++.|++.|++|+|+ . +++||||||+||++++++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 156 (265)
T cd06605 81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA- 156 (265)
T ss_pred cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence 9988886 2678899999999999999999999 7 999999999999999999999999999876522111
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....|+..|+|||++.+..++. ++||||+||++|
T Consensus 157 ---------~~~~~~~~y~~PE~~~~~~~~~---~~Dv~slG~~l~ 190 (265)
T cd06605 157 ---------KTFVGTSSYMAPERIQGNDYSV---KSDIWSLGLSLI 190 (265)
T ss_pred ---------hcccCChhccCHHHHcCCCCCc---hhhHHHHHHHHH
Confidence 1166889999999998876654 599999999988
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-27 Score=247.74 Aligned_cols=173 Identities=21% Similarity=0.246 Sum_probs=145.5
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC--cccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~--~~~lv~ 547 (746)
++|+..+.||.|++|.||+ ||+|.+.... .....++.+|++++++++||||++++++|.+.. ..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 3678889999999999996 8999876432 234567899999999999999999999986543 678999
Q ss_pred hhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 548 KAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 548 e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
||+++|+|. ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999874 24578899999999999999999999 999999999999999999999999999876532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. .....++..|+|||.+.+..++.+ +||||+||++|
T Consensus 158 ~~----------~~~~~~~~~y~~pE~~~~~~~~~~---~Dv~slG~il~ 194 (287)
T cd06621 158 SL----------AGTFTGTSFYMAPERIQGKPYSIT---SDVWSLGLTLL 194 (287)
T ss_pred cc----------cccccCCccccCHHHhcCCCCCch---hhHHHHHHHHH
Confidence 11 112457889999999988776554 99999999998
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-27 Score=243.96 Aligned_cols=177 Identities=20% Similarity=0.288 Sum_probs=145.4
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccccchh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFEGFDF 547 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~~lv~ 547 (746)
+|+..+.+|.|+||.||+ ||+|++.... ....+.+..|++++++++||||+++++++... ...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 478889999999999996 7888875432 33456788999999999999999999988653 4578999
Q ss_pred hhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 548 KAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHC--QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 548 e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~--~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
||++++++. ...+++.++..++.|++.|++|||..+ ..+|+||||||+||+++.++.+|++|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999875 346899999999999999999999221 229999999999999999999999999999876
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ......|+..|+|||++.+..++. ++|||||||++|
T Consensus 161 ~~~~~--------~~~~~~~~~~~~~pE~~~~~~~~~---~~Dv~slG~il~ 201 (265)
T cd08217 161 GHDSS--------FAKTYVGTPYYMSPEQLNHMSYDE---KSDIWSLGCLIY 201 (265)
T ss_pred cCCcc--------cccccccCCCccChhhhcCCCCCc---hhHHHHHHHHHH
Confidence 33211 112356899999999998776654 499999999988
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-27 Score=243.35 Aligned_cols=166 Identities=24% Similarity=0.277 Sum_probs=142.8
Q ss_pred EeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCcc
Q 041467 488 IREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL 555 (746)
Q Consensus 488 ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l 555 (746)
||.|++|.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.++...++++||+++|++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 68999999996 8999876432 23456799999999999999999999999999999999999999998
Q ss_pred c-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccc
Q 041467 556 R-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630 (746)
Q Consensus 556 ~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~ 630 (746)
. ...+++..+..++.|++.|++|+|+. +++|+||||+||+++.++.+|++|||+++...... .
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---------~ 148 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---------K 148 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---------c
Confidence 6 34679999999999999999999998 99999999999999999999999999998763321 1
Q ss_pred cccccccccccccccccccccccCCCccceeeccceee
Q 041467 631 SIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 631 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....|+..|+|||++.+..++. ++||||+||++|
T Consensus 149 ~~~~~~~~~~~~PE~~~~~~~~~---~~Di~slG~il~ 183 (262)
T cd05572 149 TWTFCGTPEYVAPEIILNKGYDF---SVDYWSLGILLY 183 (262)
T ss_pred cccccCCcCccChhHhcCCCCCC---hhhhhhhHHHHH
Confidence 12356889999999988776654 499999999998
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-27 Score=246.31 Aligned_cols=174 Identities=21% Similarity=0.315 Sum_probs=146.0
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+|+..+.||+|+||.||+ ||+|.+.... ....+.+.+|++++++++||||+++++.+...+..++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 477889999999999997 7999876542 23345688999999999999999999999999999999999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC-cEEEccccccccccCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV-VTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~-~~ki~DfGla~~~~~~~~ 621 (746)
++++++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++ .+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 9998875 22478999999999999999999999 999999999999999875 569999999976532211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||+..+..++. ++||||+||+++
T Consensus 158 --------~~~~~~~~~~~~ape~~~~~~~~~---~~Dv~slG~il~ 193 (257)
T cd08225 158 --------LAYTCVGTPYYLSPEICQNRPYNN---KTDIWSLGCVLY 193 (257)
T ss_pred --------cccccCCCccccCHHHHcCCCCCc---hhhHHHHHHHHH
Confidence 112246899999999988776654 499999999988
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-27 Score=251.07 Aligned_cols=178 Identities=21% Similarity=0.293 Sum_probs=144.8
Q ss_pred CCCCCCeEeecCCeeEEE-----------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Cccc
Q 041467 481 NFSPANKIREGGFNIVYN-----------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFEG 544 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~-----------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~~ 544 (746)
+|+..+.||+|+||.||+ ||+|++.... ....+.+.+|+.++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 477888999999999996 8889886532 33456788999999999999999999999988 7899
Q ss_pred chhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC----CCcEEEcccc
Q 041467 545 FDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ----DVVTHVGDLG 611 (746)
Q Consensus 545 lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~----~~~~ki~DfG 611 (746)
+||||+.++.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 999999764332 12678999999999999999999999 9999999999999999 9999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+++........ ........||..|+|||++.+... ++.++||||+||++|
T Consensus 158 ~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~--~~~~~Dv~slG~~l~ 207 (316)
T cd07842 158 LARLFNAPLKP-----LADLDPVVVTIWYRAPELLLGARH--YTKAIDIWAIGCIFA 207 (316)
T ss_pred cccccCCCccc-----ccccCCccccccccCHHHHhCCCC--CCcHHHHHHHHHHHH
Confidence 99875332211 112234678999999999876432 233599999999988
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-27 Score=249.18 Aligned_cols=175 Identities=21% Similarity=0.273 Sum_probs=141.7
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--hhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCc-----
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQK--EASRSFAAEFNALRNIR-HRNLIKIITICSSIDF----- 542 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~----- 542 (746)
++|+..+.||+|+||.||+ ||||++..... ...+.+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 3688899999999999997 89998765432 23456889999999995 6999999999887665
Q ss_pred ccchhhhccCCccc----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-CCcEEEcccc
Q 041467 543 EGFDFKAISNGQLR----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-DVVTHVGDLG 611 (746)
Q Consensus 543 ~~lv~e~~~~g~l~----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DfG 611 (746)
.+++|||+++ ++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 442 13579999999999999999999999 9999999999999998 8999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+++....... ......+++.|+|||++.+... .+.++||||+||++|
T Consensus 157 ~~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~--~~~~~Di~slG~~l~ 203 (295)
T cd07837 157 LGRAFSIPVK--------SYTHEIVTLWYRAPEVLLGSTH--YSTPVDIWSVGCIFA 203 (295)
T ss_pred cceecCCCcc--------ccCCcccccCCCChHHhhCCCC--CCchHHHHHHHHHHH
Confidence 9976532111 1122456889999999875432 234699999999998
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-27 Score=247.34 Aligned_cols=175 Identities=23% Similarity=0.320 Sum_probs=142.1
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
++|+..+.||+|++|.||+ ||+|++..... ...+.+.+|++++++++||||+++++++......++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 5788999999999999997 89998764422 234568899999999999999999999999999999999
Q ss_pred hccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-CCcEEEccccccccccCCC
Q 041467 549 AISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-DVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 549 ~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DfGla~~~~~~~ 620 (746)
|+++ .+. ...+++..+..++.||+.|++|||+. +|+||||||+||+++. ++.+||+|||++.......
T Consensus 82 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred cccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 9964 442 22357888889999999999999999 9999999999999985 5679999999997643211
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......|++.|+|||++.+... .+.++||||+||++|
T Consensus 158 --------~~~~~~~~~~~y~~PE~~~~~~~--~~~~~Dv~slG~i~~ 195 (294)
T PLN00009 158 --------RTFTHEVVTLWYRAPEILLGSRH--YSTPVDIWSVGCIFA 195 (294)
T ss_pred --------cccccCceeecccCHHHHhCCCC--CCcHHHHHHHHHHHH
Confidence 11123567899999999876432 233599999999998
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-27 Score=255.91 Aligned_cols=180 Identities=22% Similarity=0.283 Sum_probs=145.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC----Ccc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI----DFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~----~~~ 543 (746)
.++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|+.++++++||||+++++++... ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 36889999999999999996 8999886432 23456678899999999999999999987643 457
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
++||||+. |++. ...+++..+..++.||+.|++|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 159 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSS 159 (334)
T ss_pred EEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceeecc
Confidence 89999996 4553 44589999999999999999999999 999999999999999999999999999976533
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .........|+..|+|||++.+... ++.++||||+||++|
T Consensus 160 ~~~~----~~~~~~~~~~~~~y~~PE~~~~~~~--~~~~~Di~slG~~l~ 203 (334)
T cd07855 160 SPTE----HKYFMTEYVATRWYRAPELLLSLPE--YTTAIDMWSVGCIFA 203 (334)
T ss_pred cCcC----CCcccccccccccccChHHhcCCcc--cccccchHHHHHHHH
Confidence 2211 1112234578999999999865322 344699999999988
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-27 Score=247.61 Aligned_cols=177 Identities=22% Similarity=0.318 Sum_probs=151.4
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
...+.|+..+.+|+|++|.||+ ||+|++..... ..+.+.+|++++++++||||+++++++...+..++++
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566788899999999999997 78898865433 4567889999999999999999999999999999999
Q ss_pred hhccCCccc-----cc-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 548 KAISNGQLR-----LC-NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 548 e~~~~g~l~-----~~-~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||+++++|. .. .+++.++..++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||++........
T Consensus 95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 999999886 22 789999999999999999999998 999999999999999999999999999876532211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||++.+..++. ++||||+||++|
T Consensus 172 --------~~~~~~~~~~y~~PE~~~~~~~~~---~~Dv~slGvil~ 207 (286)
T cd06614 172 --------KRNSVVGTPYWMAPEVIKRKDYGP---KVDIWSLGIMCI 207 (286)
T ss_pred --------hhccccCCcccCCHhHhcCCCCCC---ccccHHHHHHHH
Confidence 112345788999999998776654 599999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-27 Score=246.41 Aligned_cols=175 Identities=19% Similarity=0.288 Sum_probs=144.6
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhhh-hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQK-EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
+|+..+.||.|++|.||+ ||||++..... .....+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 478899999999999997 89998865432 23456788999999999999999999999999999999999
Q ss_pred cCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+++... ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+|++|||+++.......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 155 (284)
T cd07836 81 DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN-- 155 (284)
T ss_pred CccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc--
Confidence 853222 13589999999999999999999999 999999999999999999999999999976532111
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......++..|+|||++.+... ++.++||||+||++|
T Consensus 156 ------~~~~~~~~~~y~~PE~~~~~~~--~~~~~Dv~slG~~l~ 192 (284)
T cd07836 156 ------TFSNEVVTLWYRAPDVLLGSRT--YSTSIDIWSVGCIMA 192 (284)
T ss_pred ------ccccccccccccChHHhcCCCC--CCcHHHHHHHHHHHH
Confidence 1122457889999999876532 234699999999988
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-27 Score=248.90 Aligned_cols=173 Identities=24% Similarity=0.347 Sum_probs=142.7
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
|+..+.||.|++|.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+.+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 66788999999999997 8999876443 223456889999999999999999999999999999999999
Q ss_pred cCCccc-----c--cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-----L--CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-----~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
. +++. . ..+++..+..++.|+++|++|||+. +++||||+|+||++++++.+||+|||+++......
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--- 153 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV--- 153 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc---
Confidence 5 4554 1 2589999999999999999999999 99999999999999999999999999997642211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|+|||++.+... .+.++||||+||++|
T Consensus 154 -----~~~~~~~~~~~~~aPE~~~~~~~--~~~~~Di~slG~~l~ 191 (283)
T cd07835 154 -----RTYTHEVVTLWYRAPEILLGSRQ--YSTPVDIWSIGCIFA 191 (283)
T ss_pred -----cccCccccccCCCCCceeecCcc--cCcHHHHHHHHHHHH
Confidence 11122456889999998876432 233599999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-27 Score=248.37 Aligned_cols=182 Identities=19% Similarity=0.271 Sum_probs=144.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc----
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDF---- 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~---- 542 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++||||+++++++...+.
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 456799999999999999996 8999875432 2223456789999999999999999999877543
Q ss_pred ----ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 543 ----EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 543 ----~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
.++||||+.+.... ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 90 YKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 48999999753222 23689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......... ........++..|+|||++.+... .+.++||||+||++|
T Consensus 167 ~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~--~~~~~Di~slG~~l~ 215 (310)
T cd07865 167 RAFSLSKNSK----PNRYTNRVVTLWYRPPELLLGERD--YGPPIDMWGAGCIMA 215 (310)
T ss_pred ccccCCcccC----CCCccCcccCccccCcHHhcCCcc--cCchhhhHHHHHHHH
Confidence 8764322211 111223567899999999876532 234699999999988
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-27 Score=245.28 Aligned_cols=175 Identities=22% Similarity=0.283 Sum_probs=143.2
Q ss_pred EeecCCeeEEE---------EEeehhhhhhh---hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCcc
Q 041467 488 IREGGFNIVYN---------VAMKVANLKQK---EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL 555 (746)
Q Consensus 488 ig~g~~g~v~~---------vavK~~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l 555 (746)
||+|+||.||+ ||+|++..... ...+.+.+|++++++++||||+++++.+......++++||++++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 58899999997 89998864432 4556789999999999999999999999999999999999999988
Q ss_pred c-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccc
Q 041467 556 R-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630 (746)
Q Consensus 556 ~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~ 630 (746)
. ...+++..+..++.|++.||+|||+. +++||||+|+||++++++.+||+|||++.................
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 5 35789999999999999999999999 999999999999999999999999999876432211000000112
Q ss_pred cccccccccccccccccccccccCCCccceeeccceee
Q 041467 631 SIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 631 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....++..|+|||.......+. ++||||+||++|
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~---~~Dv~slG~~~~ 192 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSK---TVDWWSLGCILY 192 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCc---chhhHHHHHHHH
Confidence 22356788999999998776544 599999999998
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-27 Score=252.18 Aligned_cols=179 Identities=19% Similarity=0.269 Sum_probs=145.5
Q ss_pred HHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC-
Q 041467 473 AELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSI- 540 (746)
Q Consensus 473 ~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~- 540 (746)
.++....++|+..+.||+|+||.||+ ||+|++... .....+.+.+|++++++++||||+++++++...
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 45566788999999999999999996 899988643 222345688999999999999999999988643
Q ss_pred -----CcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 541 -----DFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 541 -----~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
...+++++++ ++++. ...+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~dfg 165 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 165 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEeccc
Confidence 2356777776 56664 35689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+++.... ......||..|+|||++.+... .+.++||||+||++|
T Consensus 166 ~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~--~~~~~DvwslG~il~ 209 (345)
T cd07877 166 LARHTDD-----------EMTGYVATRWYRAPEIMLNWMH--YNQTVDIWSVGCIMA 209 (345)
T ss_pred ccccccc-----------cccccccCCCccCHHHHhCccC--CCchhhHHHHHHHHH
Confidence 9876421 1123568999999999876321 244699999999988
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-27 Score=249.28 Aligned_cols=179 Identities=22% Similarity=0.303 Sum_probs=145.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSID----- 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~----- 541 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 457899999999999999997 8899886432 223456788999999999999999999987754
Q ss_pred -----cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 542 -----FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 542 -----~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
..++++||++++.+. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||
T Consensus 85 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 85 KKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred cccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCccc
Confidence 688999999864332 24689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++........ .......++..|+|||++.+... .+.++||||+||+++
T Consensus 162 ~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~--~~~~~Di~slG~~~~ 209 (302)
T cd07864 162 LARLYNSEES-------RPYTNKVITLWYRPPELLLGEER--YGPAIDVWSCGCILG 209 (302)
T ss_pred ccccccCCcc-------cccccceeccCccChHHhcCCCC--CCchhHHHHHHHHHH
Confidence 9987533221 11122356788999998865432 234599999999988
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.5e-27 Score=243.51 Aligned_cols=166 Identities=24% Similarity=0.284 Sum_probs=134.5
Q ss_pred eEeecCCeeEEE---------EEeehhhhhhh---hhhHHHHHHH---HHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 487 KIREGGFNIVYN---------VAMKVANLKQK---EASRSFAAEF---NALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 487 ~ig~g~~g~v~~---------vavK~~~~~~~---~~~~~~~~E~---~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
.||+|+||.||+ ||+|++..... .....+..|. +.++..+||+|+++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 479999999995 89998764321 1112233343 44555689999999999999999999999999
Q ss_pred CCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcc
Q 041467 552 NGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626 (746)
Q Consensus 552 ~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~ 626 (746)
+|++. ...+++.++..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~------ 151 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------ 151 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC------
Confidence 99885 45689999999999999999999999 99999999999999999999999999987542211
Q ss_pred ccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 627 TASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 627 ~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
.....|+..|+|||++.+. .++ .++||||+||++|
T Consensus 152 ----~~~~~~~~~y~aPE~~~~~~~~~---~~~Di~s~G~~l~ 187 (278)
T cd05606 152 ----PHASVGTHGYMAPEVLQKGVAYD---SSADWFSLGCMLF 187 (278)
T ss_pred ----CcCcCCCcCCcCcHHhcCCCCCC---cccchHhHHHHHH
Confidence 1235689999999999754 344 3599999999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-27 Score=250.30 Aligned_cols=177 Identities=24% Similarity=0.290 Sum_probs=143.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--hhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Cccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITICSSI--DFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||+|++..... .....+.+|++++++++||||+++++++.+. +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 456899999999999999997 89998864432 2233567899999999999999999998765 4579
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+||||+.+ ++. ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++....
T Consensus 85 lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 99999975 332 35689999999999999999999999 999999999999999999999999999987633
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ......++..|+|||++.+... ++.++||||+||++|
T Consensus 161 ~~~--------~~~~~~~~~~y~aPE~~~~~~~--~~~~~DvwslG~il~ 200 (309)
T cd07845 161 PAK--------PMTPKVVTLWYRAPELLLGCTT--YTTAIDMWAVGCILA 200 (309)
T ss_pred ccC--------CCCcccccccccChhhhcCCCC--cCchHHHHHHHHHHH
Confidence 211 1122346888999999876432 234599999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-27 Score=252.09 Aligned_cols=182 Identities=23% Similarity=0.309 Sum_probs=146.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCC--cc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNI-RHRNLIKIITICSSID--FE 543 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~--~~ 543 (746)
..++|+..+.||+|+||.||+ ||||++... .......+.+|+.+++++ +||||++++++|...+ ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 456789999999999999996 889987432 223345677899999999 9999999999987543 57
Q ss_pred cchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 544 GFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 544 ~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
++||||+. +++. ...+++..+..++.||+.|++|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 85 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 85 YLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred EEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 99999997 4554 33678999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .......+.||..|+|||++.+... .+.++||||+||++|
T Consensus 161 ~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~--~~~~sDi~slG~~l~ 204 (337)
T cd07852 161 EENP---ENPVLTDYVATRWYRAPEILLGSTR--YTKGVDMWSVGCILG 204 (337)
T ss_pred cccc---cCcchhcccccccccCceeeecccc--ccccchHHHHHHHHH
Confidence 2210 1122334678999999999876432 234699999999988
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-28 Score=259.09 Aligned_cols=173 Identities=25% Similarity=0.323 Sum_probs=147.9
Q ss_pred CCCCeEeecCCeeEEE-------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 483 SPANKIREGGFNIVYN-------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~-------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
....+||+|+||+||| ||||++... ..+...++.+|+-+|.+++|||+++++|+|.... ..+|++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 3568999999999997 899998644 3455778999999999999999999999998866 889999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||+.|.|. ...+.....+.|..|||+|+.|||.+ .+|||||-++|||+..-..+||+|||+|+.+..+...
T Consensus 778 ~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred hcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 99999985 56788889999999999999999999 9999999999999999999999999999998655432
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ..-.-.+.|||=|.+....|+.. +|||||||..|
T Consensus 855 y~~------~~gK~pikwmale~i~~~~~thq---SDVWsfGVtiW 891 (1177)
T KOG1025|consen 855 YSA------PGGKVPIKWMALESIRIRKYTHQ---SDVWSFGVTIW 891 (1177)
T ss_pred ccc------cccccCcHHHHHHHhhccCCCch---hhhhhhhhhHH
Confidence 211 11222457999999998888665 99999999887
|
|
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-27 Score=246.31 Aligned_cols=174 Identities=22% Similarity=0.306 Sum_probs=144.1
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccccchhh
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFEGFDFK 548 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~~lv~e 548 (746)
|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 56788999999999997 8899887552 33445788999999999999999999999988 78999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+++ ++. ...+++.++..++.|+++|++|||+. +++|+||||+||++++++.+||+|||++........
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~- 155 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS- 155 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCc-
Confidence 9975 443 24689999999999999999999999 999999999999999999999999999987643221
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|+|||.+.+... .+.++|||||||++|
T Consensus 156 ------~~~~~~~~~~~y~~PE~~~~~~~--~~~~~Dv~slG~~l~ 193 (287)
T cd07840 156 ------ADYTNRVITLWYRPPELLLGATR--YGPEVDMWSVGCILA 193 (287)
T ss_pred ------ccccccccccccCCceeeEcccc--CChHHHHHHHHHHHH
Confidence 11223456889999998875432 234699999999988
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.5e-27 Score=240.71 Aligned_cols=173 Identities=23% Similarity=0.254 Sum_probs=139.3
Q ss_pred HHHhhhhcCCCCCCeE--eecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecC
Q 041467 473 AELSKATNNFSPANKI--REGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSI 540 (746)
Q Consensus 473 ~~~~~~~~~~~~~~~i--g~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~ 540 (746)
.+.....+.|+..+.+ |+|+||.||+ +|+|++....... . |+.....+ +||||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~--e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---I--EPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---h--hHHHHHHhhcCCCEEEEEEEEecC
Confidence 3444455677777776 9999999996 7888775432111 1 22222222 699999999999999
Q ss_pred CcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC-cEEEccccccc
Q 041467 541 DFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV-VTHVGDLGLAK 614 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~-~~ki~DfGla~ 614 (746)
+..++||||+++|+|. ...+++.++..++.|+++|++|||+. +|+||||||+||+++.++ .++|+|||+++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~ 158 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCK 158 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccce
Confidence 9999999999999986 34789999999999999999999999 999999999999999888 99999999987
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ....|+..|+|||++.+..++. ++||||+||++|
T Consensus 159 ~~~~~------------~~~~~~~~y~aPE~~~~~~~~~---~~DvwslG~il~ 197 (267)
T PHA03390 159 IIGTP------------SCYDGTLDYFSPEKIKGHNYDV---SFDWWAVGVLTY 197 (267)
T ss_pred ecCCC------------ccCCCCCcccChhhhcCCCCCc---hhhHHHHHHHHH
Confidence 65211 1246889999999998776654 599999999988
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.5e-27 Score=239.82 Aligned_cols=174 Identities=26% Similarity=0.403 Sum_probs=149.8
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhhh--hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+|+..+.||+|++|.||+ ||+|.+..... .....+.+|++++++++||||+++++++.+....+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 478889999999999996 88998865533 4456799999999999999999999999999999999999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
++++++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 154 (254)
T cd06627 81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK--- 154 (254)
T ss_pred CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCcc---
Confidence 9998886 35689999999999999999999999 999999999999999999999999999987643221
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||...+..++. ++||||+|+++|
T Consensus 155 -----~~~~~~~~~~y~~pe~~~~~~~~~---~~Dv~~lG~~l~ 190 (254)
T cd06627 155 -----DDASVVGTPYWMAPEVIEMSGAST---ASDIWSLGCTVI 190 (254)
T ss_pred -----cccccccchhhcCHhhhcCCCCCc---chhHHHHHHHHH
Confidence 122356889999999988766544 599999999988
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-27 Score=240.39 Aligned_cols=165 Identities=24% Similarity=0.283 Sum_probs=137.2
Q ss_pred CeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHH-hhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNA-LRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~-l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||||++.... ......+..|..+ ....+||||+++++++...+..++++||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5689999999997 8999886432 2223344555554 4456899999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|++. ...+++.++..++.|++.||+|||+. +|+||||+|+||+++.++.+||+|||+++....
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~--------- 149 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE--------- 149 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc---------
Confidence 9886 35689999999999999999999999 999999999999999999999999999875421
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....|+..|+|||.+.+..++. ++||||+||++|
T Consensus 150 ---~~~~~~~~~y~~pe~~~~~~~~~---~~Dv~slG~il~ 184 (260)
T cd05611 150 ---NKKFVGTPDYLAPETILGVGDDK---MSDWWSLGCVIF 184 (260)
T ss_pred ---cccCCCCcCccChhhhcCCCCcc---hhhhHHHHHHHH
Confidence 11256889999999998776544 599999999998
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-27 Score=229.98 Aligned_cols=177 Identities=20% Similarity=0.249 Sum_probs=152.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~ 544 (746)
...+|...++||+|+|++|.. +|+|++++.- .+...-.+.|-.+..+. +||.+|.+..+|......+
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 346788999999999999974 8999987542 23344466677666555 6999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+|.||+++|+|- .++++++.++.+..+|+-||.|||++ ||+.||+|..|||+|..|++|++|||+++.--.
T Consensus 328 fvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l~- 403 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG- 403 (593)
T ss_pred EEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCCC-
Confidence 999999999985 67899999999999999999999999 999999999999999999999999999986321
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.+++||+.|+|||++.+..|... +|+|++||+|+
T Consensus 404 -------~gd~tstfcgtpnyiapeilrgeeygfs---vdwwalgvlmf 442 (593)
T KOG0695|consen 404 -------PGDTTSTFCGTPNYIAPEILRGEEYGFS---VDWWALGVLMF 442 (593)
T ss_pred -------CCcccccccCCCcccchhhhcccccCce---ehHHHHHHHHH
Confidence 2233456999999999999999988665 99999999988
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=244.59 Aligned_cols=172 Identities=22% Similarity=0.247 Sum_probs=142.0
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
|...+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 66678899999999997 8899875332 23345688999999999999999999999999999999999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+.+..+. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 103 ~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~------ 173 (313)
T cd06633 103 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP------ 173 (313)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC------
Confidence 9654322 34689999999999999999999999 999999999999999999999999999864211
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....|+..|+|||++........+.++||||+||++|
T Consensus 174 ------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~ 211 (313)
T cd06633 174 ------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 211 (313)
T ss_pred ------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHH
Confidence 11356889999999986432222345699999999998
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-28 Score=248.38 Aligned_cols=175 Identities=23% Similarity=0.268 Sum_probs=152.5
Q ss_pred hcCCCCCCeEeecCCeeEEEE---------Eeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYNV---------AMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~v---------avK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..+++.+..+|-||||.|-.| |+|++++. ..+..+....|-++|..++.|.||++|..|.+..+.|+.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 345566778999999999763 55666543 234455678899999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||.|-+|.+. ...++....+.|+..+.+|++|||+. +||.|||||+|.++|.+|-+|+.|||+|+.+..
T Consensus 499 mEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~--- 572 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS--- 572 (732)
T ss_pred HHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhcc---
Confidence 9999999885 56799999999999999999999999 999999999999999999999999999998742
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...+.++|||+.|.|||++..+..+.. +|.||+|+.+|
T Consensus 573 ------g~KTwTFcGTpEYVAPEIILnKGHD~a---vDyWaLGIli~ 610 (732)
T KOG0614|consen 573 ------GRKTWTFCGTPEYVAPEIILNKGHDRA---VDYWALGILIY 610 (732)
T ss_pred ------CCceeeecCCcccccchhhhccCcchh---hHHHHHHHHHH
Confidence 234557999999999999999988766 99999999988
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.6e-27 Score=238.04 Aligned_cols=173 Identities=28% Similarity=0.380 Sum_probs=150.2
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
+|+..+.||+|++|.||+ ||+|++........+.+.+|++++++++||||+++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 477889999999999997 78888865544456789999999999999999999999999999999999999
Q ss_pred CCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 552 NGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 552 ~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
++++. ...+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+........
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---- 153 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---- 153 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc----
Confidence 88886 24789999999999999999999998 999999999999999999999999999977633211
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....|+..|+|||++.+..++. ++||||+||++|
T Consensus 154 -----~~~~~~~~~~~~PE~~~~~~~~~---~~Dv~slG~il~ 188 (253)
T cd05122 154 -----RNTMVGTPYWMAPEVINGKPYDY---KADIWSLGITAI 188 (253)
T ss_pred -----ccceecCCcccCHHHHcCCCCCc---cccHHHHHHHHH
Confidence 12356889999999998776544 599999999998
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-27 Score=247.24 Aligned_cols=185 Identities=21% Similarity=0.288 Sum_probs=145.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--hhhHHHHHHHHHhhcCCCCceeeEEEEEecCC------
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITICSSID------ 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------ 541 (746)
.++|+..+.||+|+||.||+ ||||++..... .....+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 57899999999999999996 88998754322 22346789999999999999999999876543
Q ss_pred --cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccc
Q 041467 542 --FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614 (746)
Q Consensus 542 --~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~ 614 (746)
..++|+||+...... ...+++.++..++.|+++|++|||+. +|+||||||+||++++++.+|++|||+++
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCccch
Confidence 358999998654322 34689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCCc---ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTA---ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~---~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
........... ..........|++.|+|||++.+... ++.++||||+||++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--~~~~~Dv~slG~il~ 218 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERR--YTTAVDIWGIGCVFA 218 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCc--cCchhHhHHHHHHHH
Confidence 65433221110 01122344678999999999875432 234599999999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.2e-27 Score=250.23 Aligned_cols=172 Identities=20% Similarity=0.292 Sum_probs=141.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC------
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSID------ 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------ 541 (746)
..+|...+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 46899999999999999996 8999875432 223456889999999999999999999987643
Q ss_pred cccchhhhccCCccc---ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 542 FEGFDFKAISNGQLR---LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
..++|+||+.. .+. ...+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+|++|||+++....
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~ 169 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARHADA 169 (342)
T ss_pred eEEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC
Confidence 34899999864 443 34689999999999999999999999 999999999999999999999999999875421
Q ss_pred CCCCCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
......||..|+|||++.+. .+ +.++||||+||++|
T Consensus 170 -----------~~~~~~~~~~y~aPE~~~~~~~~---~~~~Dv~slGvil~ 206 (342)
T cd07879 170 -----------EMTGYVVTRWYRAPEVILNWMHY---NQTVDIWSVGCIMA 206 (342)
T ss_pred -----------CCCCceeeecccChhhhcCcccc---CchHHHHHHHHHHH
Confidence 11235688999999998763 34 34599999999998
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-27 Score=251.95 Aligned_cols=176 Identities=23% Similarity=0.275 Sum_probs=146.3
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----ccc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSID-----FEG 544 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~-----~~~ 544 (746)
+|+..+.||.|++|.||+ ||||++.... ....+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 478889999999999997 8999876543 344567999999999999999999999988875 789
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
++|||+.+ ++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 81 lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 81 IVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 99999974 443 34689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
... ........||..|+|||++.+. .+ +.++||||+||++|
T Consensus 157 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~---~~~sDi~slG~il~ 198 (330)
T cd07834 157 EDE-----KGFLTEYVVTRWYRAPELLLSSSRY---TKAIDIWSVGCIFA 198 (330)
T ss_pred ccc-----cccccccccccCcCCceeeecccCC---CcchhHHHHHHHHH
Confidence 210 0112335689999999999877 44 34599999999988
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-27 Score=244.53 Aligned_cols=183 Identities=25% Similarity=0.361 Sum_probs=151.2
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccch
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv 546 (746)
++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++ ||||+++++++...+..+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 3688899999999999997 8999876532 233467889999999999 99999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||+++++++. ...+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++++|||++........
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence 9999999986 34789999999999999999999999 999999999999999999999999999987643322
Q ss_pred CCCc------------ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTA------------ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~------------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... ..........|+..|+|||+..+..++. ++||||+||+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~---~~Di~slG~~l~ 213 (280)
T cd05581 158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGK---SSDLWALGCIIY 213 (280)
T ss_pred cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCCh---hhhHHHHHHHHH
Confidence 1000 0011223456889999999988776544 499999999988
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.5e-27 Score=250.13 Aligned_cols=175 Identities=19% Similarity=0.242 Sum_probs=144.0
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC----
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID---- 541 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~---- 541 (746)
...++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 3567899999999999999996 899987532 2223456889999999999999999999987654
Q ss_pred --cccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 542 --FEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 542 --~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
..++||||+ ++++. ...+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+|++|||+++.
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~~~ 167 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ 167 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccccc
Confidence 347899998 55554 45789999999999999999999999 999999999999999999999999999976
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .....|++.|+|||++.+... .+.++||||+||++|
T Consensus 168 ~~~~-----------~~~~~~~~~y~aPE~~~~~~~--~~~~~Di~slG~ll~ 207 (343)
T cd07880 168 TDSE-----------MTGYVVTRWYRAPEVILNWMH--YTQTVDIWSVGCIMA 207 (343)
T ss_pred cccC-----------ccccccCCcccCHHHHhCCCC--CCcHHHHHHHHHHHH
Confidence 4211 123567899999999875321 244699999999988
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-27 Score=253.46 Aligned_cols=179 Identities=20% Similarity=0.270 Sum_probs=143.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC---------
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI--------- 540 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--------- 540 (746)
..+|+..+.||.|+||.||+ ||+|++........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 36789999999999999996 899988665555567788999999999999999999876553
Q ss_pred -----CcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-CCCcEEEccc
Q 041467 541 -----DFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGDL 610 (746)
Q Consensus 541 -----~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ki~Df 610 (746)
...+++|||+. +++. ...+++..+..++.||+.|++|||+. +|+||||||+||+++ +++.+|++||
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECCc
Confidence 24689999997 4554 35689999999999999999999999 999999999999997 4568999999
Q ss_pred cccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 611 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+++.+....... .......|+..|+|||++..... .+.++||||+||++|
T Consensus 160 g~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~--~~~~~DiwSlGvil~ 210 (342)
T cd07854 160 GLARIVDPHYSHK-----GYLSEGLVTKWYRSPRLLLSPNN--YTKAIDMWAAGCIFA 210 (342)
T ss_pred ccceecCCccccc-----cccccccccccccCHHHHhCccc--cCchhhHHHHHHHHH
Confidence 9998653221110 11122457889999998765322 244699999999998
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.2e-27 Score=265.48 Aligned_cols=227 Identities=21% Similarity=0.289 Sum_probs=176.6
Q ss_pred cCCCCCCeEeecCCeeEEE----------------EEeehhhhhh-hhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCC
Q 041467 480 NNFSPANKIREGGFNIVYN----------------VAMKVANLKQ-KEASRSFAAEFNALRNIR-HRNLIKIITICSSID 541 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~----------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~ 541 (746)
++.+..+.+|+|.||.|++ ||||..+... ....+.+..|+++|+.+. |||||.++|+|...+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 3445566999999999986 8999886443 345678999999999995 999999999999999
Q ss_pred cccchhhhccCCccc----cc-----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC
Q 041467 542 FEGFDFKAISNGQLR----LC-----------------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD 600 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~----~~-----------------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~ 600 (746)
..++|+||+..|++. .. .++..+...++.|||.|++||++. ++||||+.++|||+.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEec
Confidence 999999999999885 22 388899999999999999999999 999999999999999
Q ss_pred CCCcEEEccccccccccCCCCCCCccccccccccccc--ccccccccccccccccCCCccceeeccceeec-------cc
Q 041467 601 QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGT--VGYVAPVIIAARNLENREKRHTVMSFPQRFAL-------NE 671 (746)
Q Consensus 601 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt--~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~-------~~ 671 (746)
++..+||+|||+||......... .....|+ ..|||||.+....|+.+ +||||||+++|. .+
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~-------~~~~~~~LP~kWmApEsl~~~~ft~k---SDVWSfGI~L~EifsLG~~PY 522 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYR-------TKSSAGTLPVKWMAPESLFDRVFTSK---SDVWSFGILLWEIFTLGGTPY 522 (609)
T ss_pred CCCEEEEccccceeccCCCCceE-------ecCCCCccceeecCHHHhccCccccc---chhhHHHHHHHHHhhCCCCCC
Confidence 99999999999999754332211 1112222 35999999999888766 999999998881 11
Q ss_pred cc--cccchhh---c--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 672 KK--QNKSILK---S--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 672 ~~--~~~~i~~---~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
.. ....++. . ....+..+.+.+..+|..||...|+ ||+..+.....++
T Consensus 523 p~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 523 PGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred CCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 11 0111111 1 1122346678888999999999998 9999987766665
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-26 Score=242.37 Aligned_cols=172 Identities=23% Similarity=0.292 Sum_probs=142.0
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhhh-hhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchhhhc
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQK-EASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~~-~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
|+..+.||+|++|.||+ ||||++..... .......+|+..+++++ ||||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 56788999999999996 88998764422 22234567999999999 999999999999999999999999
Q ss_pred cCCccc-----c--cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-----L--CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-----~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+|++. . ..+++.++..++.|++.|++|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--- 153 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--- 153 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC---
Confidence 67664 1 3679999999999999999999999 99999999999999999999999999997653221
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||++..... .+.++|||||||+++
T Consensus 154 ------~~~~~~~~~~~~aPE~~~~~~~--~~~~~Di~s~G~~l~ 190 (283)
T cd07830 154 ------PYTDYVSTRWYRAPEILLRSTS--YSSPVDIWALGCIMA 190 (283)
T ss_pred ------CcCCCCCcccccCceeeecCcC--cCCccchhhHHHHHH
Confidence 1123568899999999865432 234699999999988
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-26 Score=244.39 Aligned_cols=179 Identities=20% Similarity=0.265 Sum_probs=143.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+.++.+.. ||||++++++|.+....+++
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 346788899999999999997 8999886432 223455677887777765 99999999999999999999
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||+.+ .+. ...+++..+..++.|+++|++|||+.+ +|+||||||+||++++++.+||+|||++..+....
T Consensus 93 ~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 93 MELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred eeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 999854 332 346899999999999999999999732 89999999999999999999999999987653211
Q ss_pred CCCCcccccccccccccccccccccccccc-cccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARN-LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~~~~DiwSlG~i~~ 668 (746)
. .....|+..|+|||.+.+.. ....+.++|||||||++|
T Consensus 170 ~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~ 209 (296)
T cd06618 170 A---------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLV 209 (296)
T ss_pred c---------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHH
Confidence 1 11235788999999997654 122345699999999998
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-26 Score=241.05 Aligned_cols=171 Identities=24% Similarity=0.381 Sum_probs=139.9
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcC---CCCceeeEEEEEecCCc-----
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNI---RHRNLIKIITICSSIDF----- 542 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l---~HpnIv~l~~~~~~~~~----- 542 (746)
|+..+.||+|+||.||+ ||+|++.... ......+.+|+.+++++ +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 56788999999999997 8999886432 22234566788777665 69999999999998776
Q ss_pred ccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 543 EGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.+++|||+.+ ++. ...+++.++..++.|+++|++|||+. +++|+||||+||++++++.+||+|||.+..
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCccee
Confidence 8999999974 443 23589999999999999999999999 999999999999999999999999999977
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ......++..|+|||++.+..++. ++||||+||++|
T Consensus 157 ~~~~~---------~~~~~~~~~~~~~PE~~~~~~~~~---~~Di~s~G~~l~ 197 (287)
T cd07838 157 YSFEM---------ALTSVVVTLWYRAPEVLLQSSYAT---PVDMWSVGCIFA 197 (287)
T ss_pred ccCCc---------ccccccccccccChHHhccCCCCC---cchhhhHHHHHH
Confidence 53221 112245788999999998877655 499999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-26 Score=244.91 Aligned_cols=181 Identities=16% Similarity=0.123 Sum_probs=143.6
Q ss_pred CCCCeEeecCCeeEEE-------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCC
Q 041467 483 SPANKIREGGFNIVYN-------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG 553 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~-------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g 553 (746)
...+.+|.|+++.||+ ||||++... .....+.+.+|+++++.++||||+++++++...+..+++|||+++|
T Consensus 5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 3445556667777775 999998654 2445567999999999999999999999999999999999999999
Q ss_pred ccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcc
Q 041467 554 QLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626 (746)
Q Consensus 554 ~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~ 626 (746)
++. ...+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+|++|||.+..+....... ..
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~-~~ 160 (314)
T cd08216 85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ-RV 160 (314)
T ss_pred CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccc-cc
Confidence 885 24578999999999999999999999 99999999999999999999999999987654322110 01
Q ss_pred cccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 627 TASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 627 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.........++..|+|||++..... .++.++||||+||++|
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~~Diws~G~il~ 201 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQ-GYNEKSDIYSVGITAC 201 (314)
T ss_pred cccccccccccccccCHHHhcCCCC-CCCcchhHHHHHHHHH
Confidence 1112234567889999999876421 1344699999999988
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-26 Score=237.06 Aligned_cols=174 Identities=21% Similarity=0.348 Sum_probs=149.2
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+|+..+.||.|+||.||+ ||+|++.... ....+.+.+|+++++.++|||++++++.+...+..++++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 477889999999999996 8899886543 24566789999999999999999999999999999999999
Q ss_pred ccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 550 ISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 550 ~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
++++++. ...+++.++..++.+++.|++|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 9999875 15689999999999999999999999 99999999999999999999999999997653321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......|++.|+|||...+..++. ++||||+|++++
T Consensus 158 --------~~~~~~~~~~~y~~pe~~~~~~~~~---~~Dv~slG~~~~ 194 (258)
T cd08215 158 --------DLAKTVVGTPYYLSPELCQNKPYNY---KSDIWSLGCVLY 194 (258)
T ss_pred --------ceecceeeeecccChhHhccCCCCc---cccHHHHHHHHH
Confidence 1122356899999999988776654 499999999887
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-26 Score=245.87 Aligned_cols=178 Identities=16% Similarity=0.189 Sum_probs=138.3
Q ss_pred CeEeec--CCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREG--GFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g--~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
..||+| +||.||. ||||++.... ....+.+.+|+.+++.++||||++++++|...+..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 8899996 8999976432 23456789999999999999999999999999999999999999
Q ss_pred Cccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 553 GQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 553 g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
|++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+...........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~- 159 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK- 159 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc-
Confidence 8875 23578999999999999999999998 999999999999999999999999986544322111100
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..........++..|||||++.+.... ++.++||||+||++|
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~~~DiwslG~~l~ 201 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYG-YNVKSDIYSVGITAC 201 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCC-CCchhhHHHHHHHHH
Confidence 000001112356789999999764221 244699999999998
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-26 Score=246.29 Aligned_cols=176 Identities=24% Similarity=0.318 Sum_probs=145.0
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEec-CCc
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSS-IDF 542 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~ 542 (746)
+....++|+..+.||.|+||.||+ ||||++... .....+.+.+|++++++++||||++++++|.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 345678899999999999999997 899987532 22334668899999999999999999999876 457
Q ss_pred ccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 543 EGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 543 ~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
.++++||+. +++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|||.++....
T Consensus 85 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~ 160 (328)
T cd07856 85 IYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDP 160 (328)
T ss_pred EEEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccccCC
Confidence 889999984 4554 35678889999999999999999999 999999999999999999999999999875421
Q ss_pred CCCCCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||++.+. .+ +.++||||+||++|
T Consensus 161 -----------~~~~~~~~~~y~aPE~~~~~~~~---~~~~Dv~slG~il~ 197 (328)
T cd07856 161 -----------QMTGYVSTRYYRAPEIMLTWQKY---DVEVDIWSAGCIFA 197 (328)
T ss_pred -----------CcCCCcccccccCceeeeccCCc---CcHHHHHHHHHHHH
Confidence 11235678899999998653 34 44699999999988
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-26 Score=248.17 Aligned_cols=177 Identities=21% Similarity=0.259 Sum_probs=139.9
Q ss_pred CCCCCCeEeecCCeeEEE-----------EEeehhhhh--hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecC----Cc
Q 041467 481 NFSPANKIREGGFNIVYN-----------VAMKVANLK--QKEASRSFAAEFNALRNI-RHRNLIKIITICSSI----DF 542 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~-----------vavK~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~----~~ 542 (746)
+|+..+.||+|+||.||+ ||||++... .....+.+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 477788999999999996 789987542 222345688999999999 599999999976433 34
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
.+++++++. +++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 677888875 4453 45689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .........||..|+|||++.+. .+ +.++||||+||++|
T Consensus 157 ~~~~~----~~~~~~~~~g~~~y~aPE~~~~~~~~---~~~~Di~slGv~l~ 201 (332)
T cd07857 157 ENPGE----NAGFMTEYVATRWYRAPEIMLSFQSY---TKAIDVWSVGCILA 201 (332)
T ss_pred ccccc----ccccccCcccCccccCcHHHhCCCCC---CcHHHHHHHHHHHH
Confidence 32211 11122346789999999998653 33 44699999999987
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-26 Score=246.18 Aligned_cols=184 Identities=19% Similarity=0.278 Sum_probs=143.6
Q ss_pred hcCCCC-CCeEeecCCeeEEE---------EEeehhhhhhhhh--------------hHHHHHHHHHhhcCCCCceeeEE
Q 041467 479 TNNFSP-ANKIREGGFNIVYN---------VAMKVANLKQKEA--------------SRSFAAEFNALRNIRHRNLIKII 534 (746)
Q Consensus 479 ~~~~~~-~~~ig~g~~g~v~~---------vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~HpnIv~l~ 534 (746)
.++|.. .+.||+|+||.||+ ||||++....... ...+.+|+++++.++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 345654 57799999999997 8999875432111 12477999999999999999999
Q ss_pred EEEecCCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcc
Q 041467 535 TICSSIDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGD 609 (746)
Q Consensus 535 ~~~~~~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 609 (746)
+++...+..+++|||+. |++. ...+++.....++.|++.|++|||+. +|+||||||+||+++.++.+|++|
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~d 162 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIAD 162 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECC
Confidence 99999999999999997 4554 34689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCCCC-----c-ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 610 LGLAKFLYGYEPGTT-----A-ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 610 fGla~~~~~~~~~~~-----~-~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
||+++.......... . ..........++..|+|||++.+... .+.++||||+||++|
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--~~~~~Dv~slG~~l~ 225 (335)
T PTZ00024 163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEK--YHFAVDMWSVGCIFA 225 (335)
T ss_pred ccceeecccccccccccccccccccccccccccccCCCCChhcccCCC--CCcHHHHHHHHHHHH
Confidence 999976542111000 0 00111223457889999999876542 234699999999998
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-26 Score=237.96 Aligned_cols=172 Identities=23% Similarity=0.311 Sum_probs=147.6
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+|+..+.||+|+||.||+ +|+|.+.... ......+.+|++++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 477889999999999996 7888876432 33355678999999999999999999999999999999999
Q ss_pred ccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 550 ISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 550 ~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
++++++. ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999885 24688999999999999999999999 9999999999999999999999999999876332
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......|+..|+|||.+.+..++.+ +|+||+|++++
T Consensus 157 ---------~~~~~~~~~~~~~Pe~~~~~~~~~~---~D~~slG~~~~ 192 (256)
T cd08530 157 ---------MAKTQIGTPHYMAPEVWKGRPYSYK---SDIWSLGCLLY 192 (256)
T ss_pred ---------CcccccCCccccCHHHHCCCCCCch---hhHHHHHHHHH
Confidence 1112457889999999988776554 99999999988
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-26 Score=247.47 Aligned_cols=175 Identities=23% Similarity=0.293 Sum_probs=143.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----c
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID-----F 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~-----~ 542 (746)
..+|...+.||+|+||.||+ ||||++... .......+.+|+.+++.++||||+++++++.... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45788999999999999996 899987643 2233456788999999999999999999886543 4
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
.++++||+. +.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 789999996 4443 45689999999999999999999999 99999999999999999999999999998653
Q ss_pred CCCCCCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
... .......|+..|+|||++... .+ +.++|||||||++|
T Consensus 160 ~~~--------~~~~~~~~~~~y~aPE~~~~~~~~---~~~~DiwslG~il~ 200 (337)
T cd07858 160 EKG--------DFMTEYVVTRWYRAPELLLNCSEY---TTAIDVWSVGCIFA 200 (337)
T ss_pred CCc--------ccccccccccCccChHHHhcCCCC---CCcccHHHHHHHHH
Confidence 211 112235688999999998753 33 34699999999988
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-26 Score=234.56 Aligned_cols=176 Identities=24% Similarity=0.356 Sum_probs=149.8
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccccchh
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFEGFDF 547 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~~lv~ 547 (746)
+|...+.||+|++|.||+ |++|++.... ....+.+.+|++++++++||||+++++.+... ...++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 467789999999999997 8889876543 24567799999999999999999999999988 7899999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+++++++. ...+++.++..++.|+++|++|||+. +++|+|++|+||+++.++.+||+|||.+.........
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 999998886 33789999999999999999999998 9999999999999999999999999999876433211
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|+|||.+.+...+. ++||||+||++|
T Consensus 158 ------~~~~~~~~~~~y~~pE~~~~~~~~~---~~Dv~slG~il~ 194 (260)
T cd06606 158 ------EGTGSVRGTPYWMAPEVIRGEEYGR---AADIWSLGCTVI 194 (260)
T ss_pred ------ccccCCCCCccccCHhhhcCCCCCc---hhhHHHHHHHHH
Confidence 0122356889999999998776544 499999999988
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.9e-27 Score=250.47 Aligned_cols=175 Identities=21% Similarity=0.280 Sum_probs=144.6
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc---
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF--- 542 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~--- 542 (746)
...++|+..+.||+|++|.||+ ||||++... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 3456899999999999999996 899987642 22334567889999999999999999988776554
Q ss_pred ---ccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 543 ---EGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 543 ---~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.++|+||+ ++++. ...+++.++..++.|+++|++|||+. +|+||||||+||++++++.+||+|||++..
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARH 167 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccccc
Confidence 78999998 45664 44689999999999999999999999 999999999999999999999999999976
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .....++..|+|||++.+... .+.++||||+||++|
T Consensus 168 ~~~~-----------~~~~~~~~~y~aPE~~~~~~~--~~~~~DvwslGv~l~ 207 (343)
T cd07851 168 TDDE-----------MTGYVATRWYRAPEIMLNWMH--YNQTVDIWSVGCIMA 207 (343)
T ss_pred cccc-----------ccCCcccccccCHHHHhCCCC--CCchHhHHHHHHHHH
Confidence 5221 223567899999999875432 244699999999998
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-27 Score=248.47 Aligned_cols=181 Identities=20% Similarity=0.288 Sum_probs=159.0
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
...++|+....+|.|.||.||| +|||+++.......+..++|+-+++..+|||||.++|.+...+..|++|
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 3467899999999999999998 8999998877777777899999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|||-+|+++ ...+++.++..+.++..+|++|+|++ +-+|||||-.||++++.|.+|++|||.+..+..
T Consensus 92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita---- 164 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA---- 164 (829)
T ss_pred EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh----
Confidence 999999997 45789999999999999999999999 889999999999999999999999999877632
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+......++||+.|||||+..-..-..|...+|||+.|+...
T Consensus 165 ----ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAi 206 (829)
T KOG0576|consen 165 ----TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAI 206 (829)
T ss_pred ----hhhhhhcccCCccccchhHHHHHhcccccccccccccccchh
Confidence 122344589999999999997555555666799999996543
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-26 Score=239.26 Aligned_cols=173 Identities=20% Similarity=0.300 Sum_probs=141.2
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhh-----hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLK-----QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~-----~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
+|...+.||+|+||.||+ +++|+++.. .......+.+|+.++++++||||+++++++.+....+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 478889999999999996 344444321 122334577899999999999999999999998899999
Q ss_pred hhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 547 FKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 547 ~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
+||++++++. ...+++.++..++.|++.|++|||+. +++|+||||+||++++ +.+|++|||+++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999875 24689999999999999999999999 9999999999999975 579999999997753
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... ......|+..|+|||.+.+..++.+ +||||+|+++|
T Consensus 157 ~~~~--------~~~~~~~~~~~~~pe~~~~~~~~~~---~Dv~slG~~~~ 196 (260)
T cd08222 157 GSCD--------LATTFTGTPYYMSPEALKHQGYDSK---SDIWSLGCILY 196 (260)
T ss_pred CCcc--------cccCCCCCcCccCHHHHccCCCCch---hhHHHHHHHHH
Confidence 2211 1123567889999999877666544 99999999988
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.3e-26 Score=246.30 Aligned_cols=210 Identities=22% Similarity=0.283 Sum_probs=155.0
Q ss_pred CCCCCeEeecCCee-EEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchhhhccC
Q 041467 482 FSPANKIREGGFNI-VYN-------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 482 ~~~~~~ig~g~~g~-v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
|...+.+|.|+.|+ ||+ ||||++- .+....+.|||..++.-+ |||||++++.-.+..+.|+..|.|..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll---~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~ 587 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLL---EEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC 587 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCCceehHHHHh---hHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh
Confidence 44567889998875 565 9999885 333446789999999996 99999999998899999999999843
Q ss_pred Cccc----c-----cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-----CCcEEEccccccccccC
Q 041467 553 GQLR----L-----CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-----DVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 553 g~l~----~-----~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-----~~~~ki~DfGla~~~~~ 618 (746)
+|. . ........+.+..|++.||++||+. +||||||||.||||+. ..+++|+|||+++.+..
T Consensus 588 -sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 588 -SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred -hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 222 1 1111245678899999999999998 9999999999999964 35799999999999876
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeec----------cccccccch-------hhc
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFAL----------NEKKQNKSI-------LKS 681 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~----------~~~~~~~~i-------~~~ 681 (746)
..++-. ...+..||-+|+|||++.....+. ++||+|+|||+|. ...++...| ...
T Consensus 664 ~~sS~~-----r~s~~sGt~GW~APE~L~~~~~~~---avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L 735 (903)
T KOG1027|consen 664 GKSSFS-----RLSGGSGTSGWQAPEQLREDRKTQ---AVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHL 735 (903)
T ss_pred Ccchhh-----cccCCCCcccccCHHHHhccccCc---ccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceeee
Confidence 554322 234578999999999999876654 4999999999991 111111112 112
Q ss_pred cccCCCccHHHHHHhhCCCCCCCCC
Q 041467 682 AGIKGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+.+..+..++|.+|+...|..||.
T Consensus 736 ~~~~d~eA~dLI~~ml~~dP~~RPs 760 (903)
T KOG1027|consen 736 EPLPDCEAKDLISRMLNPDPQLRPS 760 (903)
T ss_pred ccCchHHHHHHHHHhcCCCcccCCC
Confidence 2222235667888888888877764
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-26 Score=238.37 Aligned_cols=172 Identities=23% Similarity=0.335 Sum_probs=144.4
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhhh--hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
|+..+.||+|++|.||+ +|+|++..... .....+.+|++++++++||||+++++++.+.+..++++||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 56778999999999997 78998764432 24567889999999999999999999999999999999999
Q ss_pred cCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 551 SNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 551 ~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
++ ++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||.+.......
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~---- 152 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV---- 152 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc----
Confidence 75 443 24789999999999999999999999 99999999999999999999999999997764321
Q ss_pred ccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|+|||.+.+. .+ +.++||||+||++|
T Consensus 153 ----~~~~~~~~~~~~~~PE~~~~~~~~---~~~~Di~slG~~l~ 190 (283)
T cd05118 153 ----RPYTHYVVTRWYRAPELLLGDKGY---STPVDIWSVGCIFA 190 (283)
T ss_pred ----ccccCccCcccccCcHHHhcCCCC---CchhHHHHHHHHHH
Confidence 112235678899999998776 33 44699999999988
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-25 Score=225.01 Aligned_cols=172 Identities=21% Similarity=0.262 Sum_probs=141.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCC--Cc----eeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRH--RN----LIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~H--pn----Iv~l~~~~~~~~~~ 543 (746)
..+|+....+|+|.||.|.. ||||+++.- ....++..-|+++++++.+ |+ +|.+.++|...+..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 67899999999999999985 899998644 3345667889999999953 33 78888999999999
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC----------------
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---------------- 601 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---------------- 601 (746)
++|+|.+-..... ..+++..+++.+++|++++++|||+. +++|-||||+|||+-+
T Consensus 167 CivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~~~ 243 (415)
T KOG0671|consen 167 CIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVCFI 243 (415)
T ss_pred EEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCcccee
Confidence 9999987322221 35689999999999999999999999 9999999999999721
Q ss_pred ----CCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 602 ----DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 602 ----~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...+||+|||.|....+.. ...+.|..|+|||++.+-.++.+ +||||+|||++
T Consensus 244 r~~ks~~I~vIDFGsAtf~~e~h-----------s~iVsTRHYRAPEViLgLGwS~p---CDvWSiGCIL~ 300 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDHEHH-----------STIVSTRHYRAPEVILGLGWSQP---CDVWSIGCILV 300 (415)
T ss_pred ccCCCcceEEEecCCcceeccCc-----------ceeeeccccCCchheeccCcCCc---cCceeeeeEEE
Confidence 2347999999998753322 34778999999999999999776 99999999998
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-26 Score=238.34 Aligned_cols=172 Identities=26% Similarity=0.350 Sum_probs=144.0
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
|+..+.||+|++|.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 56678899999999996 8999887543 333466889999999999999999999999999999999999
Q ss_pred cCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 551 SNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 551 ~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
. +++. ...+++..+..++.|++.|++|||+. +|+||||+|+||++++++.+||+|||+++.......
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--- 153 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR--- 153 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc---
Confidence 7 4664 14689999999999999999999999 999999999999999999999999999986532211
Q ss_pred ccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
......++..|+|||++.+. .++ .++||||+||++|
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~---~~~Dv~slG~~l~ 190 (282)
T cd07829 154 -----TYTHEVVTLWYRAPEILLGSKHYS---TAVDIWSVGCIFA 190 (282)
T ss_pred -----ccCccccCcCcCChHHhcCCcCCC---ccccHHHHHHHHH
Confidence 11224567889999998766 443 4599999999988
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-25 Score=246.61 Aligned_cols=181 Identities=17% Similarity=0.176 Sum_probs=134.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE-------------------------EEeehhhhhhhhhh--------------HHHHHH
Q 041467 478 ATNNFSPANKIREGGFNIVYN-------------------------VAMKVANLKQKEAS--------------RSFAAE 518 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~-------------------------vavK~~~~~~~~~~--------------~~~~~E 518 (746)
..++|+..+.||+|+||.||+ ||||++........ +.+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999993 78998764332222 234457
Q ss_pred HHHhhcCCCCce-----eeEEEEEec--------CCcccchhhhccCCccc-----------------------------
Q 041467 519 FNALRNIRHRNL-----IKIITICSS--------IDFEGFDFKAISNGQLR----------------------------- 556 (746)
Q Consensus 519 ~~~l~~l~HpnI-----v~l~~~~~~--------~~~~~lv~e~~~~g~l~----------------------------- 556 (746)
+.++.+++|.++ ++++++|.. .+..++||||+++|+|.
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 778888876654 667777654 34678999999988774
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccc
Q 041467 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGING 636 (746)
Q Consensus 557 ~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~g 636 (746)
...+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.+||+|||+++.+..... .......+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-------~~~~~g~~ 372 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-------FNPLYGML 372 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-------cCccccCC
Confidence 01245678899999999999999999 999999999999999999999999999976532111 01111335
Q ss_pred ccccccccccccccccc-------------------CCCccceeeccceee
Q 041467 637 TVGYVAPVIIAARNLEN-------------------REKRHTVMSFPQRFA 668 (746)
Q Consensus 637 t~~Y~aPE~~~~~~~~~-------------------~~~~~DiwSlG~i~~ 668 (746)
|+.|+|||++.....+. +..+.||||+||++|
T Consensus 373 tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~ 423 (507)
T PLN03224 373 DPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLM 423 (507)
T ss_pred CcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHH
Confidence 78999999986433211 112479999999999
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.6e-26 Score=229.59 Aligned_cols=156 Identities=18% Similarity=0.112 Sum_probs=131.0
Q ss_pred cCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCccc-----
Q 041467 491 GGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR----- 556 (746)
Q Consensus 491 g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~----- 556 (746)
|.+|.||+ ||+|++.... .+.+|...+....||||+++++++.+.+..+++|||+++|++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 88999996 8999886432 2345666666677999999999999999999999999999985
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccc
Q 041467 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGING 636 (746)
Q Consensus 557 ~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~g 636 (746)
...+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.++++|||.+...... .....+
T Consensus 79 ~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----------~~~~~~ 144 (237)
T cd05576 79 FLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----------CDGEAV 144 (237)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc-----------cccCCc
Confidence 34689999999999999999999999 9999999999999999999999999988654221 122456
Q ss_pred cccccccccccccccccCCCccceeeccceee
Q 041467 637 TVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 637 t~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+..|+|||++.+..++. ++||||+||++|
T Consensus 145 ~~~y~aPE~~~~~~~~~---~~DvwslG~il~ 173 (237)
T cd05576 145 ENMYCAPEVGGISEETE---ACDWWSLGAILF 173 (237)
T ss_pred CccccCCcccCCCCCCc---hhhHHHHHHHHH
Confidence 77899999987766654 499999999998
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.4e-26 Score=231.13 Aligned_cols=167 Identities=28% Similarity=0.317 Sum_probs=142.4
Q ss_pred EeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCcc
Q 041467 488 IREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL 555 (746)
Q Consensus 488 ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l 555 (746)
||+|+||.||+ ||+|++.... ......+.+|++++++++||||+++++++......+++||+++++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 68999999996 7888876443 22455789999999999999999999999999999999999998888
Q ss_pred c-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccc
Q 041467 556 R-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630 (746)
Q Consensus 556 ~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~ 630 (746)
. ...+++..+..++.|++.|+.|+|+. +++|+||||+||+++.++.++++|||++....... ..
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--------~~ 149 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--------SR 149 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC--------Cc
Confidence 5 34689999999999999999999998 99999999999999999999999999997753321 11
Q ss_pred cccccccccccccccccccccccCCCccceeeccceee
Q 041467 631 SIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 631 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....|+..|+|||...+...+. ++|+|||||++|
T Consensus 150 ~~~~~~~~~~~~Pe~~~~~~~~~---~~D~~slG~~~~ 184 (250)
T cd05123 150 TNTFCGTPEYLAPEVLLGKGYGK---AVDWWSLGVLLY 184 (250)
T ss_pred ccCCcCCccccChHHhCCCCCCc---hhhHHHHHHHHH
Confidence 22356889999999998776544 499999999987
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.8e-26 Score=240.55 Aligned_cols=170 Identities=21% Similarity=0.228 Sum_probs=140.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.++.|+....+|.|+|+.|-+ .|||++... .....+|+.++... +||||+++.+.+.+....|+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 356788888899999999875 678887544 23356788776666 5999999999999999999999
Q ss_pred hhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee-CCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL-DQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl-~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|.+.+|.+- ..+....++..|+.+|+.|++|||++ +|||||+||+|||+ +..++++|+|||.++.....
T Consensus 396 e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~--- 469 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS--- 469 (612)
T ss_pred hhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh---
Confidence 999988764 22233367888999999999999999 99999999999999 58999999999999986432
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..+.+=|..|.|||++....|++. +||||||+++|
T Consensus 470 --------~~tp~~t~~y~APEvl~~~~yt~a---cD~WSLGvlLy 504 (612)
T KOG0603|consen 470 --------CDTPALTLQYVAPEVLAIQEYTEA---CDWWSLGVLLY 504 (612)
T ss_pred --------hcccchhhcccChhhhccCCCCcc---hhhHHHHHHHH
Confidence 223456889999999998777665 99999999999
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-24 Score=245.48 Aligned_cols=177 Identities=20% Similarity=0.177 Sum_probs=119.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE-------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEE------Ee
Q 041467 478 ATNNFSPANKIREGGFNIVYN-------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITI------CS 538 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~------~~ 538 (746)
..++|+..+.||+|+||.||+ ||||++..... .+....| .++...+.+++.+... +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 567899999999999999996 78887643211 1111111 1111222222222211 23
Q ss_pred cCCcccchhhhccCCccc----ccC---------------------CCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCC
Q 041467 539 SIDFEGFDFKAISNGQLR----LCN---------------------LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLK 593 (746)
Q Consensus 539 ~~~~~~lv~e~~~~g~l~----~~~---------------------l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlk 593 (746)
.....++|+||+.+|+|. ... ..+..+..++.|++.||+|||++ +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 455788999999888774 111 11234568999999999999999 99999999
Q ss_pred CCCeeeCC-CCcEEEccccccccccCCCCCCCccccccccccccccccccccccccccccc-------------------
Q 041467 594 PSNILLDQ-DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLEN------------------- 653 (746)
Q Consensus 594 p~NILl~~-~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~------------------- 653 (746)
|+|||+++ ++.+||+|||+|+.+..... .....+.||+.|||||.+.....+.
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~-------~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~ 355 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGIN-------YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLN 355 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccc-------cCCcccccCCCccChHHhhccCCCCCCccccccccccchhcccc
Confidence 99999985 68999999999986532211 1123467899999999765332211
Q ss_pred CCCccceeeccceee
Q 041467 654 REKRHTVMSFPQRFA 668 (746)
Q Consensus 654 ~~~~~DiwSlG~i~~ 668 (746)
++.++||||+||++|
T Consensus 356 ~~~k~DVwSlGviL~ 370 (566)
T PLN03225 356 LPDRFDIYSAGLIFL 370 (566)
T ss_pred CCCCcccHHHHHHHH
Confidence 133579999999999
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-23 Score=235.87 Aligned_cols=268 Identities=24% Similarity=0.281 Sum_probs=155.7
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
..-..|||++|.|+ .+|..+. .+|+.|+|++|+|+ .+|.. .++|++|+|++|+++. +|.. ..+|+.|++
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCc-ccCc---ccccceeec
Confidence 44678999999998 7888776 48999999999998 47753 5789999999998864 4532 245555555
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCcccccC-CCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLSLSN-ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 176 (746)
+.|.....-.-.++|+.|+|++|++..++. .++|+.|+|++|+|++. |.. ..+|+.|++++|.|++++
T Consensus 270 s~N~L~~Lp~lp~~L~~L~Ls~N~Lt~LP~~p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L~~LP------- 338 (788)
T PRK15387 270 FSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQLTSLP------- 338 (788)
T ss_pred cCCchhhhhhchhhcCEEECcCCccccccccccccceeECCCCccccC-CCC---cccccccccccCcccccc-------
Confidence 554322111112345555555555554432 23455555555555532 221 123455555555554321
Q ss_pred ccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCC
Q 041467 177 NLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETP 256 (746)
Q Consensus 177 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 256 (746)
.. ..+|+.|+|++|+|+ .+|.. +.+|+.|++++|+|++ +|... .+|+.|+|++|++.+ +|.. .+
T Consensus 339 ~l---p~~Lq~LdLS~N~Ls-~LP~l----p~~L~~L~Ls~N~L~~-LP~l~---~~L~~LdLs~N~Lt~-LP~l---~s 402 (788)
T PRK15387 339 TL---PSGLQELSVSDNQLA-SLPTL----PSELYKLWAYNNRLTS-LPALP---SGLKELIVSGNRLTS-LPVL---PS 402 (788)
T ss_pred cc---ccccceEecCCCccC-CCCCC----Ccccceehhhcccccc-Ccccc---cccceEEecCCcccC-CCCc---cc
Confidence 10 124555555555555 23321 1245555555555553 44321 345555555555542 3332 23
Q ss_pred CCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCc
Q 041467 257 NLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNN 336 (746)
Q Consensus 257 ~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N 336 (746)
+|+.|++++|+|+ .+|... .+|+.|++++|+|+ .+|..++.+..+ ..|+|++|
T Consensus 403 ~L~~LdLS~N~Ls----------------------sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L-~~LdLs~N 455 (788)
T PRK15387 403 ELKELMVSGNRLT----------------------SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSE-TTVNLEGN 455 (788)
T ss_pred CCCEEEccCCcCC----------------------CCCcch---hhhhhhhhccCccc-ccChHHhhccCC-CeEECCCC
Confidence 4555555555554 244322 34667888888887 678888888877 57888888
Q ss_pred cccccCchhhhccc
Q 041467 337 LLNGSLPPEVGNLK 350 (746)
Q Consensus 337 ~l~~~~p~~~~~l~ 350 (746)
+|++..|..+..+.
T Consensus 456 ~Ls~~~~~~L~~l~ 469 (788)
T PRK15387 456 PLSERTLQALREIT 469 (788)
T ss_pred CCCchHHHHHHHHh
Confidence 88877777665443
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.8e-24 Score=223.85 Aligned_cols=183 Identities=17% Similarity=0.147 Sum_probs=135.6
Q ss_pred hhhcCCCCCCeEeecCCeeEEE----------EEeehhhhh-----hhhhhHHHHHHHHHhhcCCCCceee-EEEEEecC
Q 041467 477 KATNNFSPANKIREGGFNIVYN----------VAMKVANLK-----QKEASRSFAAEFNALRNIRHRNLIK-IITICSSI 540 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~----------vavK~~~~~-----~~~~~~~~~~E~~~l~~l~HpnIv~-l~~~~~~~ 540 (746)
...++|+..+.||+|+||+||+ ||||++... .....+.+.+|++++++++|+|||+ ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 3567899999999999999996 689876422 1223567999999999999999985 4432
Q ss_pred CcccchhhhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC-CCCCeeeCCCCcEEEccccccccccCC
Q 041467 541 DFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDL-KPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDl-kp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+..++||||+++++|.... . .....++.|+++|++|+|++ +|+|||| ||+|||++.++.+||+|||+|+.+...
T Consensus 91 ~~~~LVmE~~~G~~L~~~~-~-~~~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLAR-P-HGDPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRR 165 (365)
T ss_pred CCcEEEEEccCCCCHHHhC-c-cchHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccceecccC
Confidence 4579999999999886211 1 11257889999999999999 9999999 999999999999999999999987543
Q ss_pred CCCCCcccccccccccccccccccccccccccc---cCCCcccee-eccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLE---NREKRHTVM-SFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~---~~~~~~Diw-SlG~i~~ 668 (746)
.....-......+...|++.|+|||++...... ..++.+|-| --|=+.+
T Consensus 166 ~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW~~TGDlg~ 218 (365)
T PRK09188 166 GALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIWLATGKKVY 218 (365)
T ss_pred cchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcEEeCCCEEE
Confidence 321111111222467889999999999754322 123457777 5555444
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.3e-24 Score=245.15 Aligned_cols=175 Identities=23% Similarity=0.300 Sum_probs=147.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|.+.+.||+|+||.||+ ||||++.... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 46788999999999999996 8999986432 23346788999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+.+|+|. ...+++..++.|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+++......
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~~- 158 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRE- 158 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCccccCCc-
Confidence 9999999885 34678999999999999999999999 99999999999999999999999999998753221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccce
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQR 666 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i 666 (746)
.......||+.|+|||........ ...+++||+|+-
T Consensus 159 -------~~~~~~~~t~~~~~pe~~~~~~~~--~~~s~~~s~g~~ 194 (669)
T cd05610 159 -------LNMMDILTTPSMAKPKNDYSRTPG--QVLSLISSLGFN 194 (669)
T ss_pred -------ccccccccCccccCccccccCCCC--ceeeeeeecCcC
Confidence 122346789999999987655433 335899999964
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.5e-26 Score=247.91 Aligned_cols=382 Identities=24% Similarity=0.302 Sum_probs=255.3
Q ss_pred CCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 4 n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
|-+...|-+-....-+|+.|||++|++. ..|..+..+.+|+.|+++.|.|. ..|.+..++.+|++|.|.+|.+ ...|
T Consensus 31 N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l-~~lP 107 (1081)
T KOG0618|consen 31 NSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRL-QSLP 107 (1081)
T ss_pred cccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchh-hcCc
Confidence 3344444333334445999999999996 89999999999999999999998 6899999999999999998877 7789
Q ss_pred hhhcCCCCCCEEEccCCC---CcCcccCCCCCCEEeccCC-CcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEE
Q 041467 84 TEICSLFKLERLRIDCGG---RIDSLGHLKSLLLLSLAFN-QFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLN 159 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~---~~~~~~~l~~L~~L~Ls~N-~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 159 (746)
.++..+.+|+.|+++.|. .+..+..++.+..+..++| ++..++... ++.++|..|.+.+.++..+..++. .||
T Consensus 108 ~~~~~lknl~~LdlS~N~f~~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ld 184 (1081)
T KOG0618|consen 108 ASISELKNLQYLDLSFNHFGPIPLVIEVLTAEEELAASNNEKIQRLGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLD 184 (1081)
T ss_pred hhHHhhhcccccccchhccCCCchhHHhhhHHHHHhhhcchhhhhhcccc-chhhhhhhhhcccchhcchhhhhe--eee
Confidence 999999999999999854 3355667777777788877 223333322 555555555555555554444444 455
Q ss_pred ccCCCCC---------------------CCCCCCcc------------ccccccCCCCCCEEEcccccccccCChhhhhc
Q 041467 160 LGVNNLG---------------------SGTANELD------------FINLLTNCSKLERLYFNRNGFEGVLPHSIANL 206 (746)
Q Consensus 160 Ls~N~l~---------------------~~~~~~~~------------~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 206 (746)
|.+|.+. ........ ....-..-.+|+++++++|+++ .+|+++..+
T Consensus 185 Lr~N~~~~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~-~lp~wi~~~ 263 (1081)
T KOG0618|consen 185 LRYNEMEVLDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLS-NLPEWIGAC 263 (1081)
T ss_pred cccchhhhhhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhhh-cchHHHHhc
Confidence 5555443 21110000 0000011235666666666665 445666665
Q ss_pred ccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccCh-HHhh
Q 041467 207 SSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTL-QTYL 285 (746)
Q Consensus 207 ~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~-l~~l 285 (746)
. +|+.+...+|+++ .+|..+...++|+.|.+.+|.+. -+|+....+++|+.|+|..|+|.......+..+.. ++.+
T Consensus 264 ~-nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~l 340 (1081)
T KOG0618|consen 264 A-NLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTL 340 (1081)
T ss_pred c-cceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHH
Confidence 5 5666666666664 46666666666666666666665 56666677788888888888887433322222221 2222
Q ss_pred ---hccCCCCCCc-cccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCch-hhhcccCCceee----
Q 041467 286 ---FNNLQGNIPS-SLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPP-EVGNLKNLLRLH---- 356 (746)
Q Consensus 286 ---~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~---- 356 (746)
.|.+.. .|. .=.....|+.|++.+|.++...-+-+-+...| +.|+|++|++. ++|. .+.++..|+.|.
T Consensus 341 n~s~n~l~~-lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hL-KVLhLsyNrL~-~fpas~~~kle~LeeL~LSGN 417 (1081)
T KOG0618|consen 341 NVSSNKLST-LPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHL-KVLHLSYNRLN-SFPASKLRKLEELEELNLSGN 417 (1081)
T ss_pred hhhhccccc-cccccchhhHHHHHHHHhcCcccccchhhhccccce-eeeeecccccc-cCCHHHHhchHHhHHHhcccc
Confidence 344442 221 11235668999999999997666677788888 68999999997 6775 457788888775
Q ss_pred ----cCCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCC
Q 041467 357 ----IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNG 399 (746)
Q Consensus 357 ----lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 399 (746)
||+...++..|++|....|++.. .|.......+..++++.|.
T Consensus 418 kL~~Lp~tva~~~~L~tL~ahsN~l~~-fPe~~~l~qL~~lDlS~N~ 463 (1081)
T KOG0618|consen 418 KLTTLPDTVANLGRLHTLRAHSNQLLS-FPELAQLPQLKVLDLSCNN 463 (1081)
T ss_pred hhhhhhHHHHhhhhhHHHhhcCCceee-chhhhhcCcceEEecccch
Confidence 45566678888889888888866 5566667777888887773
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.8e-23 Score=232.51 Aligned_cols=262 Identities=26% Similarity=0.275 Sum_probs=158.9
Q ss_pred ccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCC
Q 041467 42 ISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQ 121 (746)
Q Consensus 42 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~ 121 (746)
..-..|||++|.|+ .+|..+. .+|+.|++++|++.. +|.. +++|++|++++|.....-...++|+.|+|++|.
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~LtsLP~lp~sL~~L~Ls~N~ 273 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLTSLPVLPPGLLELSIFSNP 273 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccCcccCcccccceeeccCCc
Confidence 34678999999998 6888776 489999999999854 5542 356666666654332111123455666666666
Q ss_pred cccccCC-CCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCC
Q 041467 122 FLSLSNA-SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLP 200 (746)
Q Consensus 122 l~~l~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 200 (746)
+..++.+ ++|+.|++++|+|+.. |. .+++|+.|+|++|+|++.+ .. ..+|+.|++++|+++ .+|
T Consensus 274 L~~Lp~lp~~L~~L~Ls~N~Lt~L-P~---~p~~L~~LdLS~N~L~~Lp-------~l---p~~L~~L~Ls~N~L~-~LP 338 (788)
T PRK15387 274 LTHLPALPSGLCKLWIFGNQLTSL-PV---LPPGLQELSVSDNQLASLP-------AL---PSELCKLWAYNNQLT-SLP 338 (788)
T ss_pred hhhhhhchhhcCEEECcCCccccc-cc---cccccceeECCCCccccCC-------CC---cccccccccccCccc-ccc
Confidence 5554432 3555666666666532 22 2345666666666655421 11 123555556666555 244
Q ss_pred hhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccC
Q 041467 201 HSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLT 280 (746)
Q Consensus 201 ~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~ 280 (746)
. ++.+|+.|+|++|+|++ +|... .+|+.|++++|++.+ +|.. ..+|+.|+|++|+|+
T Consensus 339 ~----lp~~Lq~LdLS~N~Ls~-LP~lp---~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt----------- 395 (788)
T PRK15387 339 T----LPSGLQELSVSDNQLAS-LPTLP---SELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLT----------- 395 (788)
T ss_pred c----cccccceEecCCCccCC-CCCCC---cccceehhhcccccc-Cccc---ccccceEEecCCccc-----------
Confidence 2 12245566666666653 44322 345555555555552 4432 234555555555554
Q ss_pred hHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCC
Q 041467 281 LQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEY 360 (746)
Q Consensus 281 ~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~ 360 (746)
.+|.. .++|+.|++++|+|+ .+|.... .+ ..|++++|+|+ .+|..+++
T Consensus 396 -----------~LP~l---~s~L~~LdLS~N~Ls-sIP~l~~---~L-~~L~Ls~NqLt-~LP~sl~~------------ 443 (788)
T PRK15387 396 -----------SLPVL---PSELKELMVSGNRLT-SLPMLPS---GL-LSLSVYRNQLT-RLPESLIH------------ 443 (788)
T ss_pred -----------CCCCc---ccCCCEEEccCCcCC-CCCcchh---hh-hhhhhccCccc-ccChHHhh------------
Confidence 23332 257899999999998 5886443 44 56999999998 67877664
Q ss_pred CCCCCCCCEEEccCCcCcccCCC
Q 041467 361 PENLSFFELLNLSYNYFGSEVPT 383 (746)
Q Consensus 361 ~~~l~~L~~L~ls~N~l~~~~p~ 383 (746)
++.|+.|+|++|+|++.+|.
T Consensus 444 ---L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 444 ---LSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred ---ccCCCeEECCCCCCCchHHH
Confidence 45668899999999998764
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-23 Score=211.90 Aligned_cols=162 Identities=28% Similarity=0.370 Sum_probs=137.5
Q ss_pred CCeeEEE---------EEeehhhhhhhhh-hHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCccc-----
Q 041467 492 GFNIVYN---------VAMKVANLKQKEA-SRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR----- 556 (746)
Q Consensus 492 ~~g~v~~---------vavK~~~~~~~~~-~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~----- 556 (746)
+||.||+ ||+|++....... .+.+.+|++.+++++||||+++++++......++++|++.++++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 4667775 8999887554333 678999999999999999999999999989999999999998886
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccc
Q 041467 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGING 636 (746)
Q Consensus 557 ~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~g 636 (746)
...+++..+..++.++++|++|||+. +|+|+||+|+||++++++.++++|||.+....... ......|
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---------~~~~~~~ 148 (244)
T smart00220 81 RGRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---------LLTTFVG 148 (244)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc---------ccccccC
Confidence 22378999999999999999999999 99999999999999999999999999998764321 1223567
Q ss_pred cccccccccccccccccCCCccceeeccceee
Q 041467 637 TVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 637 t~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+..|+|||...+..++. ++||||+|++++
T Consensus 149 ~~~~~~pE~~~~~~~~~---~~Di~slG~~l~ 177 (244)
T smart00220 149 TPEYMAPEVLLGKGYGK---AVDVWSLGVILY 177 (244)
T ss_pred CcCCCCHHHHccCCCCc---hhhHHHHHHHHH
Confidence 88999999998766654 499999999987
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-24 Score=217.59 Aligned_cols=250 Identities=20% Similarity=0.216 Sum_probs=197.0
Q ss_pred cccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcC-CCCCCccchhhcCCCCCCEEEc
Q 041467 19 FLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDS-NNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 19 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~l 97 (746)
.-..++|..|+|+.+.|.+|+.+++|+.||||+|.|+.+-|+.|.++.+|..|-+-+ |+++...-..|.+|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 456899999999988888999999999999999999999999999999988877766 7776555567899999999988
Q ss_pred cCCCC----cCcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcc------------cccCCccccCCCCCC
Q 041467 98 DCGGR----IDSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQF------------SGGVSVDFSRLKNLS 156 (746)
Q Consensus 98 ~~~~~----~~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l------------~~~~~~~~~~l~~L~ 156 (746)
.-+.. .+.|..|++|..|.|..|.+. +|..+.+++.+.+..|.+ ....|..+++..-..
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 76433 377888999999999999884 456678888888888872 223344444444444
Q ss_pred EEEccCCCCCCCCCCCc-------------------c-ccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcc
Q 041467 157 WLNLGVNNLGSGTANEL-------------------D-FINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMG 216 (746)
Q Consensus 157 ~L~Ls~N~l~~~~~~~~-------------------~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~ 216 (746)
-..|.++++.......+ . ....|..+++|+.|+|++|+++++-+.+|..+. .+++|.|.
T Consensus 228 p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a-~l~eL~L~ 306 (498)
T KOG4237|consen 228 PYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAA-ELQELYLT 306 (498)
T ss_pred hHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchh-hhhhhhcC
Confidence 33343333322211110 0 112377899999999999999988899999887 79999999
Q ss_pred cCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 217 SNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 217 ~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
.|+|...-...|.++.+|+.|+|.+|+|+...|..|..+.+|..|+|-.|.+-
T Consensus 307 ~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 307 RNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred cchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 99998777778999999999999999999999999999999999999888764
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=239.73 Aligned_cols=323 Identities=18% Similarity=0.228 Sum_probs=181.9
Q ss_pred cccccccccEEecccCc------CcccCchhhhCCc-cCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchh
Q 041467 13 LCILRTFLRYINLVNNG------FNGEIPHQIGRLI-SLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTE 85 (746)
Q Consensus 13 ~~~~~~~L~~L~Ls~N~------l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 85 (746)
.|..+++|++|.+..+. +...+|+.|..++ +|+.|++.+|.+. .+|..| ...+|+.|+|++|++ ..++..
T Consensus 553 aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l-~~L~~~ 629 (1153)
T PLN03210 553 AFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKL-EKLWDG 629 (1153)
T ss_pred HHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCccc-cccccc
Confidence 35557777777776553 2334666666653 5777777777776 566666 457777777777776 345666
Q ss_pred hcCCCCCCEEEccCCCC---cCcccCCCCCCEEeccCCCc-----ccccCCCCCcEeeCccCcccccCCccccCCCCCCE
Q 041467 86 ICSLFKLERLRIDCGGR---IDSLGHLKSLLLLSLAFNQF-----LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSW 157 (746)
Q Consensus 86 ~~~l~~L~~L~l~~~~~---~~~~~~l~~L~~L~Ls~N~l-----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 157 (746)
+..+++|+.|+|+.+.. ++.+..+++|+.|+|++|.. ..+.++++|+.|++++|..-+.+|..+ ++++|+.
T Consensus 630 ~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~ 708 (1153)
T PLN03210 630 VHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYR 708 (1153)
T ss_pred cccCCCCCEEECCCCCCcCcCCccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCE
Confidence 67777777777765432 24456666777777776543 234566677777777654333455444 5677777
Q ss_pred EEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCccc-------ccCCccccC
Q 041467 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRIS-------STIPHGIRN 230 (746)
Q Consensus 158 L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~-------~~~p~~~~~ 230 (746)
|+|++|.... .+|.. .++|+.|++++|.+. .+|..+ .+. +|+.|.+.++... ...|..+..
T Consensus 709 L~Lsgc~~L~------~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~-~L~~L~l~~~~~~~l~~~~~~l~~~~~~~ 776 (1153)
T PLN03210 709 LNLSGCSRLK------SFPDI---STNISWLDLDETAIE-EFPSNL-RLE-NLDELILCEMKSEKLWERVQPLTPLMTML 776 (1153)
T ss_pred EeCCCCCCcc------ccccc---cCCcCeeecCCCccc-cccccc-ccc-ccccccccccchhhccccccccchhhhhc
Confidence 7777664322 12221 345667777777665 455543 333 4666666553221 111112223
Q ss_pred CCCCCeeecccccceecCCcCCCCCCCCceeeccccccccccccc--ccccChHHhhhccCCCCCCccccCCCCCCeeee
Q 041467 231 LVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSS--LGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSV 308 (746)
Q Consensus 231 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~--l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~L 308 (746)
.++|+.|+|++|...+.+|..++++++|+.|+|++|..-+.+|.. +..|+.|.+.+|.....+|.. ..+|+.|+|
T Consensus 777 ~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~L 853 (1153)
T PLN03210 777 SPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRLRTFPDI---STNISDLNL 853 (1153)
T ss_pred cccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCCcccccccc---ccccCEeEC
Confidence 356666666666666666666666666666666665433333332 222333333333222233332 245666666
Q ss_pred cCCcCccccchhhhhcccccceEEccC-ccccccCchhhhcccCCceeec
Q 041467 309 SHNKLTSTLPQQILSVTTLSLYLELDN-NLLNGSLPPEVGNLKNLLRLHI 357 (746)
Q Consensus 309 s~N~l~~~~p~~~~~l~~l~~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l 357 (746)
++|.++ .+|.++..+.+| .+|++++ |++. .+|..+..++.|+.+.+
T Consensus 854 s~n~i~-~iP~si~~l~~L-~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l 900 (1153)
T PLN03210 854 SRTGIE-EVPWWIEKFSNL-SFLDMNGCNNLQ-RVSLNISKLKHLETVDF 900 (1153)
T ss_pred CCCCCc-cChHHHhcCCCC-CEEECCCCCCcC-ccCcccccccCCCeeec
Confidence 666665 566666666666 4566665 3333 45555555555544443
|
syringae 6; Provisional |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=239.55 Aligned_cols=301 Identities=18% Similarity=0.216 Sum_probs=244.5
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
..|+.|++.++.+. .+|..| ...+|++|+|++|++. .+|..+..+++|+.|+|++|...+.+|. ++.+++|+.|++
T Consensus 589 ~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L 664 (1153)
T PLN03210 589 PKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKL 664 (1153)
T ss_pred cccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEe
Confidence 56999999999996 788888 5789999999999998 6888899999999999998877677774 888999999999
Q ss_pred cCCC----CcCcccCCCCCCEEeccCCC-ccccc---CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCC
Q 041467 98 DCGG----RIDSLGHLKSLLLLSLAFNQ-FLSLS---NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGT 169 (746)
Q Consensus 98 ~~~~----~~~~~~~l~~L~~L~Ls~N~-l~~l~---~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 169 (746)
+++. .+..++++++|+.|++++|. +..++ ++++|+.|++++|...+.+|.. .++|++|+|++|.+..
T Consensus 665 ~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~-- 739 (1153)
T PLN03210 665 SDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEE-- 739 (1153)
T ss_pred cCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCcccc--
Confidence 8743 34678899999999999864 44443 6889999999999766566643 4689999999999875
Q ss_pred CCCccccccccCCCCCCEEEccccccc---c---cCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccccc
Q 041467 170 ANELDFINLLTNCSKLERLYFNRNGFE---G---VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQ 243 (746)
Q Consensus 170 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~---~---~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~ 243 (746)
+|..+ .+++|+.|++.++... + .++......+++|+.|++++|...+.+|.+++++++|+.|++++|.
T Consensus 740 -----lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~ 813 (1153)
T PLN03210 740 -----FPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCI 813 (1153)
T ss_pred -----ccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCC
Confidence 34333 5788888888774321 0 1122222333479999999998888899999999999999999987
Q ss_pred ceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecC-CcCccccchhhh
Q 041467 244 LIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSH-NKLTSTLPQQIL 322 (746)
Q Consensus 244 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~ 322 (746)
..+.+|..+ ++++|+.|+|++|..-..+|....+++.|++.+|.+. .+|.++..+++|+.|+|++ |++. .+|..+.
T Consensus 814 ~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~ 890 (1153)
T PLN03210 814 NLETLPTGI-NLESLESLDLSGCSRLRTFPDISTNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNIS 890 (1153)
T ss_pred CcCeeCCCC-CccccCEEECCCCCccccccccccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccc
Confidence 667888776 7999999999998766677777778888888888887 6899999999999999999 5555 6888888
Q ss_pred hcccccceEEccCcc
Q 041467 323 SVTTLSLYLELDNNL 337 (746)
Q Consensus 323 ~l~~l~~~L~Ls~N~ 337 (746)
.+..+ ..++++++.
T Consensus 891 ~L~~L-~~L~l~~C~ 904 (1153)
T PLN03210 891 KLKHL-ETVDFSDCG 904 (1153)
T ss_pred cccCC-CeeecCCCc
Confidence 88888 578888774
|
syringae 6; Provisional |
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-23 Score=198.46 Aligned_cols=175 Identities=20% Similarity=0.288 Sum_probs=137.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEE-EecCCcccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITI-CSSIDFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~-~~~~~~~~lv~ 547 (746)
.+.|.+.+.+|+|.||.+-. +++|.+... ....++|.||..---.+. |.|||.-|++ |+..+...+++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 45678889999999999974 889987643 334578999987655554 8999987765 56677778999
Q ss_pred hhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee-C-CCCcEEEccccccccccCCCC
Q 041467 548 KAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL-D-QDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 548 e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl-~-~~~~~ki~DfGla~~~~~~~~ 621 (746)
||++.|+|+ ...+.+....+++.|++.|++|||+. ++||||||.+|||| + +..++|+||||..+....
T Consensus 102 E~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~--- 175 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT--- 175 (378)
T ss_pred ccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCc---
Confidence 999999997 45678889999999999999999999 99999999999999 3 456899999999876421
Q ss_pred CCCcccccccccccccccccccccccccccccC--CCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENR--EKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~--~~~~DiwSlG~i~~ 668 (746)
......-+..|-|||+....+-..+ .+.+|||.||+++|
T Consensus 176 --------tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f 216 (378)
T KOG1345|consen 176 --------TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFF 216 (378)
T ss_pred --------eehhhhhhcccCCcHHHhhccccceEecccccchheeeeee
Confidence 1111233667999999875432211 66799999999888
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.9e-23 Score=212.70 Aligned_cols=176 Identities=19% Similarity=0.235 Sum_probs=144.7
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC------CCceeeEEEEEecCCccc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR------HRNLIKIITICSSIDFEG 544 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~------HpnIv~l~~~~~~~~~~~ 544 (746)
.+|.+....|+|-|+.|.+ ||||++... ..+.+.=.+|+++|++|+ .-|+++++..|...+.++
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC 510 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC 510 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence 5788888899999999986 999999754 334455678999999995 347999999999999999
Q ss_pred chhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-CCcEEEcccccccc
Q 041467 545 FDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-DVVTHVGDLGLAKF 615 (746)
Q Consensus 545 lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DfGla~~ 615 (746)
+|||-+.-. |+ ...+....+..|+.|+.-||..|... +|+|.||||.|||+++ ...+||||||.|..
T Consensus 511 lVFE~LslN-LRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 511 LVFEPLSLN-LREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGSASF 586 (752)
T ss_pred EEehhhhch-HHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCccccc
Confidence 999976432 22 33467788999999999999999888 9999999999999986 46799999999987
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccc
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKK 673 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~ 673 (746)
..+. ..+.+.-+..|+|||++.|.+|+.. .|+||.||.+|..+..
T Consensus 587 ~~en----------eitPYLVSRFYRaPEIiLG~~yd~~---iD~WSvgctLYElYtG 631 (752)
T KOG0670|consen 587 ASEN----------EITPYLVSRFYRAPEIILGLPYDYP---IDTWSVGCTLYELYTG 631 (752)
T ss_pred cccc----------cccHHHHHHhccCcceeecCcccCC---ccceeeceeeEEeecc
Confidence 6432 2334667889999999999998766 9999999999944443
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.6e-23 Score=208.41 Aligned_cols=187 Identities=25% Similarity=0.317 Sum_probs=149.2
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE------------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCC
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN------------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSID 541 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~ 541 (746)
+......|...+.||+|+|+.||+ ||+|.+.... ...+...|+++|..+. |.||+++.+++...+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 344556788999999999999996 8999886543 2345889999999996 999999999999999
Q ss_pred cccchhhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-CCCcEEEccccccccccC
Q 041467 542 FEGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ki~DfGla~~~~~ 618 (746)
...+|+||++....+ ...++..++..+++.+.+||+++|+. |||||||||+|+|.+ ..++-.|.|||+|.....
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred eeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHHHHh
Confidence 999999999877665 56688999999999999999999999 999999999999998 468889999999973211
Q ss_pred CC------C----C-CC-------------------------cccccccccccccccccccccccccccccCCCccceee
Q 041467 619 YE------P----G-TT-------------------------AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMS 662 (746)
Q Consensus 619 ~~------~----~-~~-------------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwS 662 (746)
.. . + .. ..........+||++|+|||++...+. .++++||||
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~--QttaiDiws 263 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPR--QTTAIDIWS 263 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccC--cCCccceee
Confidence 11 0 0 00 000111223579999999999986643 355799999
Q ss_pred ccceee
Q 041467 663 FPQRFA 668 (746)
Q Consensus 663 lG~i~~ 668 (746)
.|||+.
T Consensus 264 ~GVI~L 269 (418)
T KOG1167|consen 264 AGVILL 269 (418)
T ss_pred ccceee
Confidence 999987
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-22 Score=200.77 Aligned_cols=174 Identities=28% Similarity=0.391 Sum_probs=146.3
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhhhh-hhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQKE-ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
|...+.||+|++|.||+ +|+|.+...... ..+.+.+|++.+++++|+||+++++++......++++|+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 45678999999999997 788988755443 56789999999999999999999999999899999999999
Q ss_pred CCccc-----ccC-CCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 552 NGQLR-----LCN-LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 552 ~g~l~-----~~~-l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
++++. ... +++..+..++.+++.+++|||+. +++|+|++|+||+++.++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~---- 153 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA---- 153 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc----
Confidence 88876 223 88999999999999999999999 999999999999999999999999999987643220
Q ss_pred cccccccccccccccccccccc-ccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIA-ARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......++..|++||... ...+ +.++||||+||+++
T Consensus 154 ---~~~~~~~~~~~~~~pe~~~~~~~~---~~~~Dv~~lG~~~~ 191 (225)
T smart00221 154 ---ALLKTVKGTPFYLAPEVLLGGKGY---GEAVDIWSLGVILY 191 (225)
T ss_pred ---ccccceeccCCcCCHhHhcCCCCC---CchhhHHHHHHHHH
Confidence 0122356788999999984 3333 33699999999988
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=5e-22 Score=196.66 Aligned_cols=188 Identities=25% Similarity=0.396 Sum_probs=151.5
Q ss_pred EeecCCeeEEE---------EEeehhhhhhhh-hhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCccc-
Q 041467 488 IREGGFNIVYN---------VAMKVANLKQKE-ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR- 556 (746)
Q Consensus 488 ig~g~~g~v~~---------vavK~~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~- 556 (746)
||+|++|.||+ +++|++...... ..+.+.+|++.++.++|++|+++++++......++++|++.++++.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 58999999997 788887654332 3467999999999999999999999999989999999999988876
Q ss_pred ---c--cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-CCcEEEccccccccccCCCCCCCcccccc
Q 041467 557 ---L--CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-DVVTHVGDLGLAKFLYGYEPGTTAETASS 630 (746)
Q Consensus 557 ---~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DfGla~~~~~~~~~~~~~~~~~ 630 (746)
. ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++|+|||.+........ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--------~ 149 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--------L 149 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--------h
Confidence 2 3689999999999999999999999 9999999999999998 89999999999986533211 1
Q ss_pred ccccccccccccccccccc-ccccCCCccceeeccceeeccccccccchhhccccCCCccHHHHHHhhCCCCCCCC
Q 041467 631 SIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFALNEKKQNKSILKSAGIKGKKTVSFFLSLLSPSCSVFP 705 (746)
Q Consensus 631 ~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~p 705 (746)
.....+...|++||..... .++ .++|+||+|++++.. ......+..|++.++..||
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~---~~~D~~~lg~~~~~l----------------~~~~~~l~~~l~~~p~~R~ 206 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYS---EKSDIWSLGVILYEL----------------PELKDLIRKMLQKDPEKRP 206 (215)
T ss_pred hhcccCCCCccChhHhcccCCCC---chhhhHHHHHHHHHH----------------HHHHHHHHHHhhCCcccCc
Confidence 1225578899999999776 443 359999999998833 4555666666665554333
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-22 Score=199.59 Aligned_cols=229 Identities=18% Similarity=0.220 Sum_probs=172.5
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEe
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICS 538 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~ 538 (746)
++.....+++....+-+|.||.||+ |-+|.++... +-....+..|.-.+..+.|||+.++.+++.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 4445556778888899999999997 5566665432 334557889999999999999999999987
Q ss_pred cC-CcccchhhhccCCccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 539 SI-DFEGFDFKAISNGQLR-------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 539 ~~-~~~~lv~e~~~~g~l~-------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
++ +..++++.++.-|.|+ .+.++..+...++.|++.|++|||++ +|||.||.++|.+||+..+
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~Lq 434 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQ 434 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhhee
Confidence 64 4566777777667764 24567788999999999999999999 9999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecc-------cccc-cc
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALN-------EKKQ-NK 676 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~-------~~~~-~~ 676 (746)
+|++|=.++|.+.+.+-+.-... ..-...|||||.+....|+.. +|||||||.+|.. ..+. ..
T Consensus 435 VkltDsaLSRDLFP~DYhcLGDn------EnRPvkWMslEal~n~~yssa---sDvWsfGVllWELmtlg~~PyaeIDPf 505 (563)
T KOG1024|consen 435 VKLTDSALSRDLFPGDYHCLGDN------ENRPVKWMSLEALQNSHYSSA---SDVWSFGVLLWELMTLGKLPYAEIDPF 505 (563)
T ss_pred EEeccchhccccCcccccccCCC------CCCcccccCHHHHhhhhhcch---hhhHHHHHHHHHHHhcCCCCccccCHH
Confidence 99999999998866554321111 112568999999999999877 9999999999811 1110 01
Q ss_pred ch---hhc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchh
Q 041467 677 SI---LKS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 677 ~i---~~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
++ +.+ .-..+-++.+.....|..||.-.|+ ||+....+
T Consensus 506 Em~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv 549 (563)
T KOG1024|consen 506 EMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLV 549 (563)
T ss_pred HHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence 11 111 1112246778888889999999998 99987544
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.7e-22 Score=204.77 Aligned_cols=119 Identities=24% Similarity=0.433 Sum_probs=101.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-----C---CceeeEEEEEecCC
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-----H---RNLIKIITICSSID 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H---pnIv~l~~~~~~~~ 541 (746)
.++|.+.+++|-|.|++||. ||+|+++-. +...+....||++|++++ | .+||+|+++|...+
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 36899999999999999995 999998643 455677889999999984 3 36999999998754
Q ss_pred ----cccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC
Q 041467 542 ----FEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD 600 (746)
Q Consensus 542 ----~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~ 600 (746)
..++|+|++-...|. .+.++...++.|++||+.||.|||..| +|||-||||+|||+.
T Consensus 156 pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 156 PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 688999998555443 567899999999999999999999999 999999999999983
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-21 Score=231.52 Aligned_cols=138 Identities=11% Similarity=0.058 Sum_probs=98.3
Q ss_pred cCCC-CceeeEEEEEe-------cCCcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 041467 524 NIRH-RNLIKIITICS-------SIDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589 (746)
Q Consensus 524 ~l~H-pnIv~l~~~~~-------~~~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH 589 (746)
.++| +||++++++|. ..+..+.++|++ .++|+ ...+++.+++.+++||++||+|||++ +|+|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIvH 103 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIVV 103 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---Ceee
Confidence 4556 68888888872 223566777876 45664 34589999999999999999999999 9999
Q ss_pred cCCCCCCeeeCC-------------------CCcEEEccccccccccCCCCC--------CCcccccccccccccccccc
Q 041467 590 GDLKPSNILLDQ-------------------DVVTHVGDLGLAKFLYGYEPG--------TTAETASSSIGINGTVGYVA 642 (746)
Q Consensus 590 rDlkp~NILl~~-------------------~~~~ki~DfGla~~~~~~~~~--------~~~~~~~~~~~~~gt~~Y~a 642 (746)
|||||+||||+. ++.+|++|||+++........ ............+||++|||
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 999999999954 445666666666543210000 00000011223578999999
Q ss_pred cccccccccccCCCccceeeccceee
Q 041467 643 PVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 643 PE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
||++.+..++. ++|||||||++|
T Consensus 184 PE~~~~~~~~~---~sDVwSlGviL~ 206 (793)
T PLN00181 184 PEEDNGSSSNC---ASDVYRLGVLLF 206 (793)
T ss_pred hhhhccCCCCc---hhhhhhHHHHHH
Confidence 99999887755 499999999998
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=5e-22 Score=198.83 Aligned_cols=343 Identities=22% Similarity=0.216 Sum_probs=247.1
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEeccc-CcCCccCCccccCCCCCCeeeCcCCCCCCc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSN-NSFSCAIPANLSSGSNLIKLSTDSNNLVRD 81 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 81 (746)
.|.+.++|+..|..+++||.||||+|+|+.+-|++|.++.+|.+|-+.+ |+|+....+.|++|..|+.|.+.-|++.-.
T Consensus 76 qN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Ci 155 (498)
T KOG4237|consen 76 QNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCI 155 (498)
T ss_pred cCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcch
Confidence 5888889999999999999999999999999999999999998877766 999976667899999999999999999888
Q ss_pred cchhhcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCCccc-----------------ccCCC-----------
Q 041467 82 ILTEICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLS-----------------LSNAS----------- 129 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~-----------------l~~l~----------- 129 (746)
....|..|++|..|.+-.|..- .+|..+.+++.+.+..|.+.. ++...
T Consensus 156 r~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~R 235 (498)
T KOG4237|consen 156 RQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKR 235 (498)
T ss_pred hHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHH
Confidence 8889999999999988664322 478889999999999998511 11111
Q ss_pred -----------CCcEe----eCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEccccc
Q 041467 130 -----------SLEMI----EFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNG 194 (746)
Q Consensus 130 -----------~L~~L----~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~ 194 (746)
.++.+ ....+.....+...|..|++|+.|+|++|+|+.+ -..+|.++.+++.|+|..|+
T Consensus 236 i~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i------~~~aFe~~a~l~eL~L~~N~ 309 (498)
T KOG4237|consen 236 INQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRI------EDGAFEGAAELQELYLTRNK 309 (498)
T ss_pred hcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchh------hhhhhcchhhhhhhhcCcch
Confidence 11111 1112222222234588899999999999999873 44668888999999999999
Q ss_pred ccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccccccee-----------------cCCcCCCCCCC
Q 041467 195 FEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG-----------------TIPPLIGETPN 257 (746)
Q Consensus 195 l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~~l~~ 257 (746)
+...-...|.++. .|+.|+|.+|+|+...|.+|..+.+|.+|+|-.|.+.- ..|. ...-..
T Consensus 310 l~~v~~~~f~~ls-~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~-Cq~p~~ 387 (498)
T KOG4237|consen 310 LEFVSSGMFQGLS-GLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPR-CQSPGF 387 (498)
T ss_pred HHHHHHHhhhccc-cceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCC-CCCCch
Confidence 8855556666776 79999999999998889999999999999987775520 0111 122345
Q ss_pred Cceeeccccccccc---c------------cccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhh
Q 041467 258 LQLLNIGGNHLQGS---I------------LSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQIL 322 (746)
Q Consensus 258 L~~L~Ls~N~l~~~---~------------~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 322 (746)
++.++++.+.+... . |....-+.....-.|+....+|..+-. .-.+|++.+|.++ .+|.+
T Consensus 388 ~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk~lp~~iP~--d~telyl~gn~~~-~vp~~-- 462 (498)
T KOG4237|consen 388 VRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLKLLPRGIPV--DVTELYLDGNAIT-SVPDE-- 462 (498)
T ss_pred hccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchhhcCCCCCc--hhHHHhcccchhc-ccCHH--
Confidence 67788877766421 1 222222322222245555566654432 3567899999998 78988
Q ss_pred hcccccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCC
Q 041467 323 SVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYN 375 (746)
Q Consensus 323 ~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N 375 (746)
.+..+ .+|+++|+++..--..|. ++++|.+|-||+|
T Consensus 463 ~~~~l--~~dls~n~i~~Lsn~tf~---------------n~tql~tlilsyn 498 (498)
T KOG4237|consen 463 LLRSL--LLDLSNNRISSLSNYTFS---------------NMTQLSTLILSYN 498 (498)
T ss_pred HHhhh--hcccccCceehhhccccc---------------chhhhheeEEecC
Confidence 55555 499999999843333444 4555566666655
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.8e-20 Score=212.87 Aligned_cols=202 Identities=24% Similarity=0.416 Sum_probs=143.4
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
.+.+.|+|++++++ .+|..+. ++|+.|+|++|+|+ .+|..+. .+|+.|++++|++. .+|..+.
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~---------- 240 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP---------- 240 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh----------
Confidence 45789999999998 6787664 58999999999999 5777665 58999999999885 4554332
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCcccccC--CCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDF 175 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 175 (746)
.+|+.|+|++|++..++. .++|+.|+|++|+|+. +|..+. ++|+.|+|++|+|+..+
T Consensus 241 ------------~~L~~L~Ls~N~L~~LP~~l~s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~LP------ 299 (754)
T PRK15370 241 ------------DTIQEMELSINRITELPERLPSALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRTLP------ 299 (754)
T ss_pred ------------ccccEEECcCCccCcCChhHhCCCCEEECcCCccCc-cccccC--CCCcEEECCCCccccCc------
Confidence 245666666666654431 2467888888888874 455443 47888888888887532
Q ss_pred cccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCC
Q 041467 176 INLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGET 255 (746)
Q Consensus 176 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 255 (746)
..+. ++|+.|++++|.++ .+|..+. .+|+.|++++|.+++ +|..+. ++|+.|++++|++. .+|..+.
T Consensus 300 -~~lp--~sL~~L~Ls~N~Lt-~LP~~l~---~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp-- 366 (754)
T PRK15370 300 -AHLP--SGITHLNVQSNSLT-ALPETLP---PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP-- 366 (754)
T ss_pred -ccch--hhHHHHHhcCCccc-cCCcccc---ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--
Confidence 2221 36788888888887 4565432 368888888888875 666553 67888888888876 4666553
Q ss_pred CCCceeecccccccc
Q 041467 256 PNLQLLNIGGNHLQG 270 (746)
Q Consensus 256 ~~L~~L~Ls~N~l~~ 270 (746)
++|+.|+|++|+|+.
T Consensus 367 ~~L~~LdLs~N~Lt~ 381 (754)
T PRK15370 367 PTITTLDVSRNALTN 381 (754)
T ss_pred CCcCEEECCCCcCCC
Confidence 578888888888873
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5e-20 Score=210.77 Aligned_cols=231 Identities=20% Similarity=0.308 Sum_probs=175.1
Q ss_pred CcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccch
Q 041467 5 NLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILT 84 (746)
Q Consensus 5 ~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 84 (746)
.+.++|... .+.|+.|+|++|+|+ .+|..+. .+|++|+|++|+|+ .+|..+. .+|+.|+|++|++. .+|.
T Consensus 189 ~LtsLP~~I---p~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~ 258 (754)
T PRK15370 189 GLTTIPACI---PEQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPE 258 (754)
T ss_pred CcCcCCccc---ccCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCCh
Confidence 445544322 257999999999998 6787665 59999999999998 5787664 47999999999986 6777
Q ss_pred hhcCCCCCCEEEccCCCCc---CcccCCCCCCEEeccCCCcccccC--CCCCcEeeCccCcccccCCccccCCCCCCEEE
Q 041467 85 EICSLFKLERLRIDCGGRI---DSLGHLKSLLLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLN 159 (746)
Q Consensus 85 ~~~~l~~L~~L~l~~~~~~---~~~~~l~~L~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 159 (746)
.+. .+|+.|++++|... ..+. ++|+.|+|++|++..++. .++|+.|++++|+++. +|..+ .++|+.|+
T Consensus 259 ~l~--s~L~~L~Ls~N~L~~LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~ 331 (754)
T PRK15370 259 RLP--SALQSLDLFHNKISCLPENLP--EELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTA-LPETL--PPGLKTLE 331 (754)
T ss_pred hHh--CCCCEEECcCCccCccccccC--CCCcEEECCCCccccCcccchhhHHHHHhcCCcccc-CCccc--cccceecc
Confidence 664 58999999876543 2222 479999999999877653 2478899999999985 44433 26899999
Q ss_pred ccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeec
Q 041467 160 LGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTM 239 (746)
Q Consensus 160 Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L 239 (746)
+++|.++.. |..+ .++|+.|++++|+|+ .+|..+. ..|+.|++++|+|+. +|..+. .+|+.|++
T Consensus 332 Ls~N~Lt~L-------P~~l--~~sL~~L~Ls~N~L~-~LP~~lp---~~L~~LdLs~N~Lt~-LP~~l~--~sL~~LdL 395 (754)
T PRK15370 332 AGENALTSL-------PASL--PPELQVLDVSKNQIT-VLPETLP---PTITTLDVSRNALTN-LPENLP--AALQIMQA 395 (754)
T ss_pred ccCCccccC-------Chhh--cCcccEEECCCCCCC-cCChhhc---CCcCEEECCCCcCCC-CCHhHH--HHHHHHhh
Confidence 999998763 3333 268999999999987 5776553 379999999999984 676654 36889999
Q ss_pred ccccceecCCcC----CCCCCCCceeeccccccc
Q 041467 240 ESSQLIGTIPPL----IGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 240 ~~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~ 269 (746)
++|++. .+|.. ++.++++..|+|.+|.++
T Consensus 396 s~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 396 SRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred ccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 999987 45554 345588899999999887
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-20 Score=182.95 Aligned_cols=159 Identities=16% Similarity=0.134 Sum_probs=122.8
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhh---HH------HHHHHHHhhcCCCCceeeEEEEEecC--
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEAS---RS------FAAEFNALRNIRHRNLIKIITICSSI-- 540 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~---~~------~~~E~~~l~~l~HpnIv~l~~~~~~~-- 540 (746)
.++|...+.+|.|+||.||. +|||++........ .. +.+|++.+++++||+|....+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~ 109 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER 109 (232)
T ss_pred hCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence 57899999999999999996 89999864432221 22 68999999999999999999886643
Q ss_pred ------CcccchhhhccCCccccc-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 541 ------DFEGFDFKAISNGQLRLC-NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 541 ------~~~~lv~e~~~~g~l~~~-~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
+..+++|||+++.++... .+++ ....+++.+++.+|+. +|+|||+||+||+++.+| ++++|||..
T Consensus 110 ~~~~~~~~~~lvmEyi~G~tL~~~~~~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i~liDfg~~ 181 (232)
T PRK10359 110 KTLRYAHTYIMLIEYIEGVELNDMPEISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-LRIIDLSGK 181 (232)
T ss_pred ccccccCCeEEEEEEECCccHHHhhhccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-EEEEECCCc
Confidence 247899999999888532 2222 3466999999999999 999999999999999888 999999988
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+....... ...++....+.. ++||||||+.+.
T Consensus 182 ~~~~e~~a--------------------~d~~vler~y~~---~~di~~lg~~~~ 213 (232)
T PRK10359 182 RCTAQRKA--------------------KDRIDLERHYGI---KNEIKDLGYYLL 213 (232)
T ss_pred ccccchhh--------------------HHHHHHHhHhcc---cccccceeEeeh
Confidence 65421110 011444555653 499999999877
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.4e-20 Score=174.36 Aligned_cols=224 Identities=17% Similarity=0.223 Sum_probs=166.7
Q ss_pred CCCeEeecCCeeEEE-------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCc
Q 041467 484 PANKIREGGFNIVYN-------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQ 554 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~-------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~ 554 (746)
...++.+...|+.|+ +++|++..+. ....++|..|.-.++-+.||||+.++|+|.......++..||+.|+
T Consensus 194 l~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 455777888899997 7778776553 3446789999999999999999999999999999999999999999
Q ss_pred cc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 555 LR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 555 l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|+ ....+..++.+++.+||+|++|||+. .|-|..--+.+..|++|++.+++|+ .+=+++-
T Consensus 274 lynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris-mad~kfs----------- 340 (448)
T KOG0195|consen 274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS-MADTKFS----------- 340 (448)
T ss_pred HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee-cccceee-----------
Confidence 87 22457889999999999999999997 3345555788999999999988875 2212211
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceeec-----------cccccccchhh--ccccCCCccHHHHH
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFAL-----------NEKKQNKSILK--SAGIKGKKTVSFFL 694 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~-----------~~~~~~~~i~~--~~~~~~~~~~~~~~ 694 (746)
....+.+-++.||+||.++..+.+..-.++|+|||.++++. ...+...+|.- .....+......+.
T Consensus 341 -fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~ 419 (448)
T KOG0195|consen 341 -FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMN 419 (448)
T ss_pred -eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHH
Confidence 01112334789999999998877766678999999998882 12222222211 12222345566777
Q ss_pred HhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 695 SLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 695 ~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
++++.|..+.|. ||..+.++.++++|.
T Consensus 420 klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 420 KLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 778877777887 999998888877763
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.4e-19 Score=170.06 Aligned_cols=126 Identities=17% Similarity=0.120 Sum_probs=98.1
Q ss_pred CCeEeecCCeeEEE--------EEeehhhhhhhh--h-------h-----------------HHHHHHHHHhhcCCCCce
Q 041467 485 ANKIREGGFNIVYN--------VAMKVANLKQKE--A-------S-----------------RSFAAEFNALRNIRHRNL 530 (746)
Q Consensus 485 ~~~ig~g~~g~v~~--------vavK~~~~~~~~--~-------~-----------------~~~~~E~~~l~~l~HpnI 530 (746)
...||+|++|.||+ ||||+++..... . . ....+|++.++++.|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 46799999999997 999998643210 0 1 123459999999988876
Q ss_pred eeEEEEEecCCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 531 IKIITICSSIDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 531 v~l~~~~~~~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yL-H~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
.....+.. ...++||||++++.+. ...+++.+...++.|++.+++|+ |+. +|+||||||+||+++ ++.
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-CCc
Confidence 44333222 2348999999887653 35688899999999999999999 577 999999999999998 478
Q ss_pred EEEccccccccc
Q 041467 605 THVGDLGLAKFL 616 (746)
Q Consensus 605 ~ki~DfGla~~~ 616 (746)
++++|||+|...
T Consensus 156 v~LiDFG~a~~~ 167 (190)
T cd05147 156 LYIIDVSQSVEH 167 (190)
T ss_pred EEEEEccccccC
Confidence 999999999753
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.5e-18 Score=182.99 Aligned_cols=179 Identities=28% Similarity=0.409 Sum_probs=146.3
Q ss_pred CCCCCeEeecCCeeEEE------EEeehhhhhhhh---hhHHHHHHHHHhhcCCCC-ceeeEEEEEecCCcccchhhhcc
Q 041467 482 FSPANKIREGGFNIVYN------VAMKVANLKQKE---ASRSFAAEFNALRNIRHR-NLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~------vavK~~~~~~~~---~~~~~~~E~~~l~~l~Hp-nIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
|...+.+|.|+||.||+ +|+|.+...... ....+.+|+.+++.+.|+ +|+++++++......+++++++.
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVD 81 (384)
T ss_pred ceeEEeecCCCCeEEEEEEeccEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCC
Confidence 66778999999999997 688888755432 467899999999999988 79999999977777899999999
Q ss_pred CCccc-----c---cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC-cEEEccccccccccCCCCC
Q 041467 552 NGQLR-----L---CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV-VTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 552 ~g~l~-----~---~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~-~~ki~DfGla~~~~~~~~~ 622 (746)
++.+. . ..++......++.|++.+++|+|.. +++|||+||+||+++..+ .++++|||.++........
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 82 GGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 98886 1 1688999999999999999999999 899999999999999888 7999999999865432221
Q ss_pred CCccccccccccccccccccccccccc---ccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAAR---NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .......||..|+|||.+.+. .+.. ..|+||+|++++
T Consensus 159 ~~~~--~~~~~~~~t~~~~~pe~~~~~~~~~~~~---~~D~~s~g~~~~ 202 (384)
T COG0515 159 SSIP--ALPSTSVGTPGYMAPEVLLGLSLAYASS---SSDIWSLGITLY 202 (384)
T ss_pred cccc--ccccccccccccCCHHHhcCCCCCCCCc---hHhHHHHHHHHH
Confidence 1000 123457899999999999874 4433 599999998776
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.2e-18 Score=167.34 Aligned_cols=128 Identities=17% Similarity=0.235 Sum_probs=100.2
Q ss_pred CCCCCeEeecCCeeEEE------EEeehhhhhhhhhhHHHHHHHHHhhcC-----CCCceeeEEEEEecCC---ccc-ch
Q 041467 482 FSPANKIREGGFNIVYN------VAMKVANLKQKEASRSFAAEFNALRNI-----RHRNLIKIITICSSID---FEG-FD 546 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~------vavK~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~l~~~~~~~~---~~~-lv 546 (746)
+...+.||+|+||.||. .+||++........+.+.+|+++++.+ +||||++++|++.+.. ..+ +|
T Consensus 4 L~~~~~LG~G~~~~Vy~hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred cCCcceecCCCceEEEECCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 45578999999999997 568877654444556799999999999 6799999999998864 323 68
Q ss_pred hhh--ccCCccc----ccCCCHHHHHHHHHHHHHHH-HHHHhcCCCCeEEcCCCCCCeeeCC----CCcEEEcc-ccccc
Q 041467 547 FKA--ISNGQLR----LCNLSLTQRVNIAIDVAFAI-EYLRHHCQPSIVHGDLKPSNILLDQ----DVVTHVGD-LGLAK 614 (746)
Q Consensus 547 ~e~--~~~g~l~----~~~l~~~~~~~i~~~i~~~l-~yLH~~~~~~ivHrDlkp~NILl~~----~~~~ki~D-fGla~ 614 (746)
+|| +.+|+|. ...+++. ..++.|++.++ +|||++ +||||||||+||+++. ++.++|+| ||.+.
T Consensus 84 ~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~ 158 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNIGEST 158 (210)
T ss_pred ecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECCCCcc
Confidence 999 5578885 2334444 45678888777 999999 9999999999999974 34899999 55443
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.8e-18 Score=165.50 Aligned_cols=126 Identities=21% Similarity=0.153 Sum_probs=101.6
Q ss_pred CCeEeecCCeeEEE--------EEeehhhhhhhh--------------------------hhHHHHHHHHHhhcCCCCce
Q 041467 485 ANKIREGGFNIVYN--------VAMKVANLKQKE--------------------------ASRSFAAEFNALRNIRHRNL 530 (746)
Q Consensus 485 ~~~ig~g~~g~v~~--------vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~HpnI 530 (746)
...||+|++|.||+ ||||+++..... ....+.+|.+.+.++.|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46899999999997 999987643110 01234689999999999988
Q ss_pred eeEEEEEecCCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCCeeeCCCCc
Q 041467 531 IKIITICSSIDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRH-HCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 531 v~l~~~~~~~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
.....+... ..++||||++++.+. ...++..+...++.|++.++.|+|+ . +|+||||||+||+++ ++.
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-CCC
Confidence 654444333 348999999887432 3457788999999999999999999 8 999999999999998 899
Q ss_pred EEEccccccccc
Q 041467 605 THVGDLGLAKFL 616 (746)
Q Consensus 605 ~ki~DfGla~~~ 616 (746)
++|+|||+|+.+
T Consensus 156 ~~liDFG~a~~~ 167 (190)
T cd05145 156 PYIIDVSQAVEL 167 (190)
T ss_pred EEEEEcccceec
Confidence 999999999875
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-18 Score=195.53 Aligned_cols=176 Identities=20% Similarity=0.256 Sum_probs=137.1
Q ss_pred CCCCeEeecCCeeEEE---------EEeehhhh---h--h-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 483 SPANKIREGGFNIVYN---------VAMKVANL---K--Q-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~---------vavK~~~~---~--~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.....+|.|++|.|+. .+.|.... . . ......+..|..+-..++|||++..+..+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 3567899999996653 22222211 0 0 111223667888889999999998887777766666669
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|||++ ++. ...+...++..++.|+..|++|+|+. ||.|||+||+|++++.+|.+||+|||.+....-...
T Consensus 401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e- 475 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE- 475 (601)
T ss_pred hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCcc-
Confidence 99998 665 23688999999999999999999999 999999999999999999999999999876532211
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......+.+|+..|+|||++.+..|+++ .+||||.|+|++
T Consensus 476 ---~~~~~~~g~~gS~pY~apE~~~~~~ydpr--~vDiwS~~ii~~ 516 (601)
T KOG0590|consen 476 ---KNIHESSGIVGSDPYLAPEVLTGKEYDPR--AVDVWSCGIIYI 516 (601)
T ss_pred ---hhhhhhcCcccCCcCcCcccccccccCcc--hhhhhhccceEE
Confidence 11234556899999999999999999877 899999999988
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.6e-18 Score=180.91 Aligned_cols=181 Identities=23% Similarity=0.288 Sum_probs=138.4
Q ss_pred CCCCCCeEeecCCeeEEE----------EEeehhhhhhhhhhHHHHHHHHHhhcCCC----CceeeEEEEE-ecCCcccc
Q 041467 481 NFSPANKIREGGFNIVYN----------VAMKVANLKQKEASRSFAAEFNALRNIRH----RNLIKIITIC-SSIDFEGF 545 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~----------vavK~~~~~~~~~~~~~~~E~~~l~~l~H----pnIv~l~~~~-~~~~~~~l 545 (746)
+|.+.+.||+|+||.||. +|+|+...........+..|+.++..+.+ +++.++++.. ....+.++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999996 56666544322222268889999999873 6899999998 47778899
Q ss_pred hhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC-----CcEEEcccccc
Q 041467 546 DFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-----VVTHVGDLGLA 613 (746)
Q Consensus 546 v~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~-----~~~ki~DfGla 613 (746)
||+.+ +-+|. ...++...+.+|+.|++.||+++|+. |++||||||+|+++... ..+.+.|||+|
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99887 23332 36789999999999999999999999 99999999999999754 46899999999
Q ss_pred c--cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 K--FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~--~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+ ...................+.||..|.++.+..+.+.+.+ .|+||++-++.
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~---DDles~~Y~l~ 228 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRR---DDLESLFYMLL 228 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCc---hhhhhHHHHHH
Confidence 8 3322221100011111245779999999999999887666 99999775544
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-18 Score=184.43 Aligned_cols=233 Identities=23% Similarity=0.313 Sum_probs=109.1
Q ss_pred cccccEEecccCcCcc----cCchhhhCCccCcEEecccCcCCc------cCCccccCCCCCCeeeCcCCCCCCccchhh
Q 041467 17 RTFLRYINLVNNGFNG----EIPHQIGRLISLERLILSNNSFSC------AIPANLSSGSNLIKLSTDSNNLVRDILTEI 86 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 86 (746)
++.|++|+|+++.++. .+++.+...++|++|++++|.+.+ .++..+..+++|+.|++++|.+.+..+..+
T Consensus 22 l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~ 101 (319)
T cd00116 22 LLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVL 101 (319)
T ss_pred HhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHH
Confidence 3446666666666532 244445555556666666665541 123344555566666666665554444444
Q ss_pred cCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcc---------cccCC-CCCcEeeCccCccccc----CCccccCC
Q 041467 87 CSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL---------SLSNA-SSLEMIEFSRNQFSGG----VSVDFSRL 152 (746)
Q Consensus 87 ~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~---------~l~~l-~~L~~L~Ls~N~l~~~----~~~~~~~l 152 (746)
..+.+ . ++|+.|++++|++. .+..+ ++|+.|++++|.+++. ++..+..+
T Consensus 102 ~~l~~----------------~-~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~ 164 (319)
T cd00116 102 ESLLR----------------S-SSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRAN 164 (319)
T ss_pred HHHhc----------------c-CcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhC
Confidence 33333 1 22555555555442 12233 4555555555555521 22234444
Q ss_pred CCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccC----ChhhhhcccccceEEcccCcccccCCccc
Q 041467 153 KNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVL----PHSIANLSSTIKQIAMGSNRISSTIPHGI 228 (746)
Q Consensus 153 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~~L~~L~l~~N~i~~~~p~~~ 228 (746)
++|+.|++++|.+++... ..++..+..+++|+.|++++|.+++.. +..+..++ +|++|++++|.+++.....+
T Consensus 165 ~~L~~L~l~~n~l~~~~~--~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~-~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 165 RDLKELNLANNGIGDAGI--RALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLK-SLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred CCcCEEECcCCCCchHHH--HHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccC-CCCEEecCCCcCchHHHHHH
Confidence 555555555555543100 012223334445555555555554221 12222232 45555555555543211111
Q ss_pred c-----CCCCCCeeecccccce----ecCCcCCCCCCCCceeeccccccc
Q 041467 229 R-----NLVNLNWLTMESSQLI----GTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 229 ~-----~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
. ..+.|+.|++++|.++ ..+...+..+++|+++++++|.+.
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 1 1245666666666554 112233344456666666666665
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.1e-19 Score=186.97 Aligned_cols=231 Identities=19% Similarity=0.252 Sum_probs=167.5
Q ss_pred EEecccCcCc-ccCchhhhCCccCcEEecccCcCCcc----CCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 22 YINLVNNGFN-GEIPHQIGRLISLERLILSNNSFSCA----IPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 22 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
.|+|..+.++ ...+..|..+.+|++|+|++|.++.. ++..+...++|++|+++++.+.+ .+..+.
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~~--------- 71 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGLQ--------- 71 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHHH---------
Confidence 5788889887 56677788889999999999998542 56667778889999999887742 111110
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcc-----cccCC---CCCcEeeCccCcccc----cCCccccCC-CCCCEEEccCC
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFL-----SLSNA---SSLEMIEFSRNQFSG----GVSVDFSRL-KNLSWLNLGVN 163 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~-----~l~~l---~~L~~L~Ls~N~l~~----~~~~~~~~l-~~L~~L~Ls~N 163 (746)
.....+..+++|+.|++++|.+. .+..+ ++|+.|++++|++++ .+...+..+ ++|+.|+|++|
T Consensus 72 ----~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n 147 (319)
T cd00116 72 ----SLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRN 147 (319)
T ss_pred ----HHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCC
Confidence 01134555677778888888773 23333 459999999999983 233445667 89999999999
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEccccccccc----CChhhhhcccccceEEcccCccccc----CCccccCCCCCC
Q 041467 164 NLGSGTANELDFINLLTNCSKLERLYFNRNGFEGV----LPHSIANLSSTIKQIAMGSNRISST----IPHGIRNLVNLN 235 (746)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~~L~~L~l~~N~i~~~----~p~~~~~l~~L~ 235 (746)
.+++... ..++..+..+++|+.|++++|.+++. ++..+...+ .|+.|++++|.+++. ++..+..+++|+
T Consensus 148 ~l~~~~~--~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~-~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~ 224 (319)
T cd00116 148 RLEGASC--EALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANC-NLEVLDLNNNGLTDEGASALAETLASLKSLE 224 (319)
T ss_pred cCCchHH--HHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCC-CCCEEeccCCccChHHHHHHHHHhcccCCCC
Confidence 9985211 13455677888999999999999842 333444554 799999999998743 344577889999
Q ss_pred eeecccccceecCCcCCC-----CCCCCceeeccccccc
Q 041467 236 WLTMESSQLIGTIPPLIG-----ETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 236 ~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~ 269 (746)
+|++++|.+.+.....+. ..+.|+.|++++|.++
T Consensus 225 ~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 225 VLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred EEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCC
Confidence 999999998753222221 2479999999999987
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=3e-19 Score=159.13 Aligned_cols=142 Identities=30% Similarity=0.494 Sum_probs=91.6
Q ss_pred cCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccce-ecCCcCCCCCCCC
Q 041467 180 TNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLI-GTIPPLIGETPNL 258 (746)
Q Consensus 180 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L 258 (746)
..+.+|+.|++++|+++ .+|.+++.++ .|+.|+++-|++. ++|..|+.++.|+.|||++|++. ..+|..|..++.|
T Consensus 53 a~l~nlevln~~nnqie-~lp~~issl~-klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tl 129 (264)
T KOG0617|consen 53 AELKNLEVLNLSNNQIE-ELPTSISSLP-KLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTL 129 (264)
T ss_pred HHhhhhhhhhcccchhh-hcChhhhhch-hhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHH
Confidence 33444444444444443 4444555554 4555555555554 45555555555566666555554 2455666666666
Q ss_pred ceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccc
Q 041467 259 QLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLL 338 (746)
Q Consensus 259 ~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l 338 (746)
+.|+|+.|.+. .+|..++.+++|+.|.+..|.+- ++|.+++.++.+ +.|.+.+|++
T Consensus 130 ralyl~dndfe----------------------~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~l-relhiqgnrl 185 (264)
T KOG0617|consen 130 RALYLGDNDFE----------------------ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRL-RELHIQGNRL 185 (264)
T ss_pred HHHHhcCCCcc----------------------cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHH-HHHhccccee
Confidence 66666666555 67888888888888888888887 788888888888 5788888888
Q ss_pred cccCchhhhcc
Q 041467 339 NGSLPPEVGNL 349 (746)
Q Consensus 339 ~~~~p~~~~~l 349 (746)
+ .+|++++++
T Consensus 186 ~-vlppel~~l 195 (264)
T KOG0617|consen 186 T-VLPPELANL 195 (264)
T ss_pred e-ecChhhhhh
Confidence 7 778777654
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-19 Score=161.46 Aligned_cols=185 Identities=22% Similarity=0.418 Sum_probs=137.8
Q ss_pred cCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhh
Q 041467 126 SNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIAN 205 (746)
Q Consensus 126 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 205 (746)
-+++..+.|-||+|+++ .+|..++.+.+|+.|++++|+++. +|..++.+++|+.|+++-|++. .+|..|+.
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie~-------lp~~issl~klr~lnvgmnrl~-~lprgfgs 100 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIEE-------LPTSISSLPKLRILNVGMNRLN-ILPRGFGS 100 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhhh-------cChhhhhchhhhheecchhhhh-cCccccCC
Confidence 34566777778888887 455567788888888888888763 5666777888888888888876 77888888
Q ss_pred cccccceEEcccCccc-ccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHh
Q 041467 206 LSSTIKQIAMGSNRIS-STIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTY 284 (746)
Q Consensus 206 l~~~L~~L~l~~N~i~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~ 284 (746)
++ .|+.|||.+|++. ..+|+.|..++.|+.|+|++|.+. .+|+.++++++|+.|.+..|.+-
T Consensus 101 ~p-~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll--------------- 163 (264)
T KOG0617|consen 101 FP-ALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL--------------- 163 (264)
T ss_pred Cc-hhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh---------------
Confidence 87 5888888888776 357778888888888888888885 77888888888888888888765
Q ss_pred hhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhccccc--ceEEccCccccccCch
Q 041467 285 LFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLS--LYLELDNNLLNGSLPP 344 (746)
Q Consensus 285 l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~--~~L~Ls~N~l~~~~p~ 344 (746)
.+|..++.++.|++|++.+|+++ .+|++++++.-.. ..+.+.+|.....|.+
T Consensus 164 -------~lpkeig~lt~lrelhiqgnrl~-vlppel~~l~l~~~k~v~r~E~NPwv~pIae 217 (264)
T KOG0617|consen 164 -------SLPKEIGDLTRLRELHIQGNRLT-VLPPELANLDLVGNKQVMRMEENPWVNPIAE 217 (264)
T ss_pred -------hCcHHHHHHHHHHHHhcccceee-ecChhhhhhhhhhhHHHHhhhhCCCCChHHH
Confidence 67788888888888889999988 7888877654321 2344555555443333
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.9e-18 Score=157.92 Aligned_cols=180 Identities=19% Similarity=0.232 Sum_probs=142.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCC-CceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRH-RNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~H-pnIv~l~~~~~~~~~~~lv~e 548 (746)
.+.|..++.||.|+||.+|. ||||+-...... -.+..|.++.+.++| ..|..+..++.+..+..+||+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 46899999999999999995 999986533222 247789999999986 677788888888899999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEccccccccccCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DfGla~~~~~~ 619 (746)
++ +-+|+ .+.++...++-++-|++.-++|+|.+ +++||||||+|.|..- ..++.++|||+|+...+.
T Consensus 92 LL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~ 167 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI 167 (341)
T ss_pred cc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhccc
Confidence 87 33443 56789999999999999999999999 8999999999999852 356889999999987655
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccce-ee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQR-FA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i-~~ 668 (746)
.+..- -.-.......||..|.+--+..+.+-+.+ .|+=|+|-+ ||
T Consensus 168 ~t~~H-Ipyre~r~ltGTaRYASinAh~g~eqSRR---DDmeSvgYvLmY 213 (341)
T KOG1163|consen 168 RTRQH-IPYREDRNLTGTARYASINAHLGIEQSRR---DDMESVGYVLMY 213 (341)
T ss_pred ccccc-CccccCCccceeeeehhhhhhhhhhhhhh---hhhhhhcceeee
Confidence 43221 11122345789999999888877665554 999999964 45
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.5e-17 Score=155.76 Aligned_cols=176 Identities=13% Similarity=-0.005 Sum_probs=121.5
Q ss_pred CCCCeEeecCCeeEEE-------EEeehhhhhhh----hhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchhhhc
Q 041467 483 SPANKIREGGFNIVYN-------VAMKVANLKQK----EASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~-------vavK~~~~~~~----~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.+...+++|+||+||. ++.+.+..... -....+.+|+++|++++ |++|++++++ +..+++|||+
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 3567899999999996 44443332211 12235889999999996 5889999886 3468999999
Q ss_pred cCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC-CCCCeeeCCCCcEEEccccccccccCCCCC-----CC
Q 041467 551 SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDL-KPSNILLDQDVVTHVGDLGLAKFLYGYEPG-----TT 624 (746)
Q Consensus 551 ~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDl-kp~NILl~~~~~~ki~DfGla~~~~~~~~~-----~~ 624 (746)
.+.+|.... +. ....++.|++++++|+|++ +|+|||| ||+|||++.++.++|+|||+|........- ..
T Consensus 81 ~G~~L~~~~-~~-~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~r 155 (218)
T PRK12274 81 AGAAMYQRP-PR-GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLARE 155 (218)
T ss_pred cCccHHhhh-hh-hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHH
Confidence 988875321 11 2356888999999999999 9999999 799999999999999999999854321110 00
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.-......-...++.|++|+.-....-. .-.+.++++.|+-+|
T Consensus 156 Dl~~llk~~~~y~~~~l~~~~~~~l~~~-~~~~~~w~~~g~~~~ 198 (218)
T PRK12274 156 DLRHLLKHKRMYCPAALTPVERRVLKRT-SWIRELWFATGKPVY 198 (218)
T ss_pred HHHHHHHHHHhcCCCCCCHHHHhhhccc-hhHHHHHHHhcchHH
Confidence 0000001113467888888765533211 123478889999887
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.8e-18 Score=179.89 Aligned_cols=161 Identities=21% Similarity=0.151 Sum_probs=134.8
Q ss_pred EeecCCeeEEE------------EEeehhhhhhh--hhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchhhhccC
Q 041467 488 IREGGFNIVYN------------VAMKVANLKQK--EASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 488 ig~g~~g~v~~------------vavK~~~~~~~--~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+|+|+||.|+. +|+|+..+... ........|..++..++ ||.+|++..+++.+...++++++..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 68999999984 78887765431 11225667888999998 99999999999999999999999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|.+. ...+++.....+...++-|++++|.. +|+|||+|++||+++.+|++|+.|||+++..-+.+
T Consensus 82 g~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~------- 151 (612)
T KOG0603|consen 82 GDLFTRLSKEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK------- 151 (612)
T ss_pred chhhhccccCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhh-------
Confidence 8875 44577888888899999999999999 99999999999999999999999999998763221
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..+||.-|||||++.+. .. ++|.||||++++
T Consensus 152 -----~~cgt~eymApEI~~gh--~~---a~D~ws~gvl~f 182 (612)
T KOG0603|consen 152 -----IACGTYEYRAPEIINGH--LS---AADWWSFGVLAF 182 (612)
T ss_pred -----hcccchhhhhhHhhhcc--CC---cccchhhhhhHH
Confidence 13899999999999833 33 499999999988
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-16 Score=156.17 Aligned_cols=179 Identities=19% Similarity=0.301 Sum_probs=143.1
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
-.|.+.++||+|+||++|. ||||.-..+.. .-.+..|.+..+.|. .+.|...|-+..++-+-.+|+|+
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 4688999999999999995 99998654432 234777888888886 58999988887777788899998
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC-----CcEEEccccccccccC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-----VVTHVGDLGLAKFLYG 618 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~-----~~~ki~DfGla~~~~~ 618 (746)
+ +-+|+ .+.++...+.-+|.|++.-++|+|++ ..|.|||||+|+||... ..+.|+|||+|+.+.+
T Consensus 106 L-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred h-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 7 33443 67899999999999999999999999 89999999999999643 4588999999999876
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..+..- -.-.......||.+||+--...|.+-+.+ .|.=|+|=+|.
T Consensus 182 p~TkqH-IPYrE~KSLsGTARYMSINTHlGrEQSRR---DDLEaLGHvFm 227 (449)
T KOG1165|consen 182 PKTKQH-IPYREHKSLSGTARYMSINTHLGREQSRR---DDLEALGHVFM 227 (449)
T ss_pred cccccc-CccccccccccceeeeEeeccccchhhhh---hhHHHhhhhhh
Confidence 554321 11123345789999999999888877665 99999996554
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-17 Score=160.01 Aligned_cols=84 Identities=18% Similarity=0.192 Sum_probs=73.2
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccccccccccccc
Q 041467 558 CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGT 637 (746)
Q Consensus 558 ~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt 637 (746)
..+++.++..++.||+.||+|||++ + ||+||++++++.+|+ ||+++..... ...||
T Consensus 12 ~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~-------------~~~g~ 67 (176)
T smart00750 12 RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE-------------QSRVD 67 (176)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc-------------cCCCc
Confidence 3589999999999999999999999 5 999999999999999 9999865221 12589
Q ss_pred ccccccccccccccccCCCccceeeccceee
Q 041467 638 VGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 638 ~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.|||||++.+..++. ++|||||||++|
T Consensus 68 ~~y~aPE~~~~~~~~~---~~DiwSlG~il~ 95 (176)
T smart00750 68 PYFMAPEVIQGQSYTE---KADIYSLGITLY 95 (176)
T ss_pred ccccChHHhcCCCCcc---hhhHHHHHHHHH
Confidence 9999999999887765 499999999998
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.4e-17 Score=176.60 Aligned_cols=213 Identities=20% Similarity=0.234 Sum_probs=156.1
Q ss_pred hhcCCCCceeeEEEEEecCCcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCe-EEcCCCC
Q 041467 522 LRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSI-VHGDLKP 594 (746)
Q Consensus 522 l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~i-vHrDlkp 594 (746)
|+.+.|.|+.+++|.+.++.....|.+||..|++. ...+++.-...++++|++|++|+|+- +| .|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeecc
Confidence 46789999999999999999999999999999986 45688999999999999999999987 55 9999999
Q ss_pred CCeeeCCCCcEEEccccccccccCCCCCCCccccccccccccccccccccccccccccc----CCCccceeeccceee--
Q 041467 595 SNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLEN----REKRHTVMSFPQRFA-- 668 (746)
Q Consensus 595 ~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~----~~~~~DiwSlG~i~~-- 668 (746)
+|+++|..+.+|++|||+......... ........-..-|.|||.+.+..... .++++||||||++++
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~------~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei 151 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAE------PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEI 151 (484)
T ss_pred ccceeeeeEEEEechhhhccccccccc------ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHH
Confidence 999999999999999999887643100 00111112345799999998764333 366799999999998
Q ss_pred ------cc----ccccccchhh---c-cc---cCC----CccHHHHHHhhCCCCCCCCC-CCCccchhhhc---------
Q 041467 669 ------LN----EKKQNKSILK---S-AG---IKG----KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLG--------- 717 (746)
Q Consensus 669 ------~~----~~~~~~~i~~---~-~~---~~~----~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~--------- 717 (746)
+. ..+. .++.. . .. .|. .+..+....++..||.+.|. ||++..+....
T Consensus 152 ~~r~~~~~~~~~~~~~-~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~~~ 230 (484)
T KOG1023|consen 152 LFRSGPFDLRNLVEDP-DEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGGSS 230 (484)
T ss_pred HhccCccccccccCCh-HHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccccc
Confidence 11 1110 11111 1 11 111 13344677888899999998 99887433322
Q ss_pred --------ccCCCCCCCCccccccccCcccccccC
Q 041467 718 --------LRLPSRSSSSFVSVSLATTPDLVDDRC 744 (746)
Q Consensus 718 --------~~~~~~~~~~~~~~~~~~~~~l~~~~~ 744 (746)
.++.+.++..++..+.++++++..+|+
T Consensus 231 ~~nl~D~m~~~le~Y~~nLe~~v~eRt~~l~~e~~ 265 (484)
T KOG1023|consen 231 KGNLMDSLFRMLESYADNLEKLVDERTAELEEEKK 265 (484)
T ss_pred cchhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 235566778888888888888887765
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.5e-15 Score=152.37 Aligned_cols=128 Identities=20% Similarity=0.145 Sum_probs=100.5
Q ss_pred CCCCCCeEeecCCeeEEE----------EEeehhhhhhh------------------------hhhHHHHHHHHHhhcCC
Q 041467 481 NFSPANKIREGGFNIVYN----------VAMKVANLKQK------------------------EASRSFAAEFNALRNIR 526 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~----------vavK~~~~~~~------------------------~~~~~~~~E~~~l~~l~ 526 (746)
.|...+.||+|++|.||+ ||||++..... .....+.+|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 477889999999999996 78998763311 01134678999999998
Q ss_pred CC--ceeeEEEEEecCCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEEcCCCCCCee
Q 041467 527 HR--NLIKIITICSSIDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS-IVHGDLKPSNIL 598 (746)
Q Consensus 527 Hp--nIv~l~~~~~~~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~-ivHrDlkp~NIL 598 (746)
|. .+.+.+++ ...++||||+.++++. .......+...++.|++.+++|||+. + |+|||+||+||+
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NIl 181 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNIL 181 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhEE
Confidence 63 34444443 2358999999987764 23345556789999999999999999 8 999999999999
Q ss_pred eCCCCcEEEccccccccc
Q 041467 599 LDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 599 l~~~~~~ki~DfGla~~~ 616 (746)
++ +++++++|||.|...
T Consensus 182 i~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 182 VH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EE-CCCEEEEEChhhhcc
Confidence 99 889999999998754
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.9e-15 Score=149.00 Aligned_cols=125 Identities=18% Similarity=0.213 Sum_probs=103.4
Q ss_pred CeEeecCCeeEEE-------EEeehhhhhh--------hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 486 NKIREGGFNIVYN-------VAMKVANLKQ--------KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 486 ~~ig~g~~g~v~~-------vavK~~~~~~--------~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
+.||+|++|.||+ |+||+..... ......+.+|++++..++|++|+....++...+..+++|||+
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 81 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI 81 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence 5789999999997 7888643211 112346889999999999999988777777778889999999
Q ss_pred cCCcccc--cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 551 SNGQLRL--CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 551 ~~g~l~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
+++++.. ....+ ++..++.+++.+++++|+. +++|||++|+||+++ ++.++++|||.++.
T Consensus 82 ~G~~L~~~~~~~~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 82 EGEPLKDLINSNGM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CCcCHHHHHHhccH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9988861 11222 7889999999999999999 999999999999999 78999999999875
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.6e-16 Score=155.22 Aligned_cols=175 Identities=22% Similarity=0.168 Sum_probs=110.5
Q ss_pred CCCceeeEEEEEecCC---------------------------cccchhhhccCCccc----ccCCCHHHHHHHHHHHHH
Q 041467 526 RHRNLIKIITICSSID---------------------------FEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAF 574 (746)
Q Consensus 526 ~HpnIv~l~~~~~~~~---------------------------~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~ 574 (746)
+|||||++.++|.+.. ..|+||.-++ .+|+ ....+...+.-++.|+++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~~s~r~~~~~laQlLE 352 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRHRSYRTGRVILAQLLE 352 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCCCchHHHHHHHHHHHH
Confidence 6999999999887632 2345555442 1222 445677778888999999
Q ss_pred HHHHHHhcCCCCeEEcCCCCCCeee--CCCC--cEEEccccccccccCCCCCCCcccccccccccccccccccccccccc
Q 041467 575 AIEYLRHHCQPSIVHGDLKPSNILL--DQDV--VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN 650 (746)
Q Consensus 575 ~l~yLH~~~~~~ivHrDlkp~NILl--~~~~--~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 650 (746)
|+.|||.+ +|.|||+|++|||+ |+|+ ...|+|||++-.-.. .+-.-...+.....-|...-||||+....+
T Consensus 353 av~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~--hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 353 AVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDN--HGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccc--cccccccccccccCCCcceecchhhhhcCC
Confidence 99999999 99999999999998 4555 467899998743211 110001111222345778899999987553
Q ss_pred cccC---CCccceeeccceeec-----cc-cccccch-----hh--ccccCC----CccHHHHHHhhCCCCCCCCC
Q 041467 651 LENR---EKRHTVMSFPQRFAL-----NE-KKQNKSI-----LK--SAGIKG----KKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 651 ~~~~---~~~~DiwSlG~i~~~-----~~-~~~~~~i-----~~--~~~~~~----~~~~~~~~~~~~~~~~~~p~ 706 (746)
-... ..|+|.|+.|.+-|. +. ..+.+.. ++ ..|..+ ....+.+..++.+++++|++
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvs 503 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVS 503 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCC
Confidence 2211 346999999998881 11 1111111 11 111111 23356777888888887775
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.9e-15 Score=146.23 Aligned_cols=135 Identities=25% Similarity=0.208 Sum_probs=103.4
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhh----------------------hhhHHHHHHHHHhh
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQK----------------------EASRSFAAEFNALR 523 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~----------------------~~~~~~~~E~~~l~ 523 (746)
.+......|...+.||+|+||.||+ ||||++..... .....+.+|+.++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 3333333477889999999999997 89997543210 01123678999999
Q ss_pred cCCCC--ceeeEEEEEecCCcccchhhhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC
Q 041467 524 NIRHR--NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ 601 (746)
Q Consensus 524 ~l~Hp--nIv~l~~~~~~~~~~~lv~e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~ 601 (746)
++.|+ .++..++. ...+++|||++++++.... .......++.+++.++.++|+. +|+||||||+||++++
T Consensus 89 ~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~-~~~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~ 160 (198)
T cd05144 89 ALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVR-VLEDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDD 160 (198)
T ss_pred HHHHcCCCCCceeec----CCceEEEEEeCCcchhhcc-ccccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcC
Confidence 99887 45555442 4568999999998875321 1145678899999999999998 9999999999999999
Q ss_pred CCcEEEccccccccc
Q 041467 602 DVVTHVGDLGLAKFL 616 (746)
Q Consensus 602 ~~~~ki~DfGla~~~ 616 (746)
++.++|+|||+|...
T Consensus 161 ~~~~~liDfg~~~~~ 175 (198)
T cd05144 161 DEKIYIIDWPQMVST 175 (198)
T ss_pred CCcEEEEECCccccC
Confidence 999999999999654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.58 E-value=2e-15 Score=171.03 Aligned_cols=132 Identities=20% Similarity=0.219 Sum_probs=106.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE-------EEeehhhhh--------hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN-------VAMKVANLK--------QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~--------~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
....|...+.||+|+||.||+ +++|+...+ .....+++.+|+++++.++|++|+..+.++.....
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 344556789999999999998 444432111 11123568899999999999999988888888778
Q ss_pred ccchhhhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 543 EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 543 ~~lv~e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
.++||||++++++... ......++.|++++++|||+. +|+|||+||+||++ +++.++|+|||+|+..
T Consensus 411 ~~lv~E~~~g~~L~~~---l~~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 411 KTIVMEYIGGKDLKDV---LEGNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred CEEEEEecCCCcHHHH---HHHHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 8999999999988521 125678999999999999999 99999999999999 6789999999999864
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.7e-15 Score=138.19 Aligned_cols=128 Identities=22% Similarity=0.249 Sum_probs=109.2
Q ss_pred CCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCC--CceeeEEEEEecCCcccchhhhccCCc
Q 041467 484 PANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRH--RNLIKIITICSSIDFEGFDFKAISNGQ 554 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~H--pnIv~l~~~~~~~~~~~lv~e~~~~g~ 554 (746)
..+.+|+|.++.||+ +++|+...... ...+.+|+.+++.++| +.++++++++...+..+++|||+.++.
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred cceecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 357899999999996 77888754322 4568999999999987 589999998888888999999998877
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 555 LRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 555 l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
+... +......++.+++++++++|.....+++|||+||+||++++.+.+++.|||.++.
T Consensus 80 ~~~~--~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV--SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cccC--CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 6533 6788889999999999999997555899999999999999989999999999875
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.9e-15 Score=144.81 Aligned_cols=124 Identities=22% Similarity=0.240 Sum_probs=97.5
Q ss_pred eEeecCCeeEEE-------EEeehhhhhh--------hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 487 KIREGGFNIVYN-------VAMKVANLKQ--------KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 487 ~ig~g~~g~v~~-------vavK~~~~~~--------~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
.||+|++|.||+ |++|+..... .....++.+|+++++.++|+++.....++...+..+++|||++
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 379999999997 7888743211 1123567899999999999876655555666677889999999
Q ss_pred CCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 552 NGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 552 ~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
++++... +.... ..++.+++.+++++|+. +++|||+||+||+++ ++.++++|||+++..
T Consensus 81 g~~l~~~-~~~~~-~~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 81 GKPLKDV-IEEGN-DELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CccHHHH-HhhcH-HHHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9887521 11111 18899999999999999 999999999999999 899999999998763
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-15 Score=159.78 Aligned_cols=116 Identities=27% Similarity=0.353 Sum_probs=98.5
Q ss_pred cccchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 542 FEGFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
+.|+.|++|..++|. ....++.....++.|++.|++| + +.+|||+||.||....+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 588999999888875 3456788899999999999999 5 8999999999999999999999999998
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......+. .......+..+||.+||+||.+.+..|+.+ +||||||.++|
T Consensus 404 ts~~~~~~~--~~~~a~~t~~~gt~~YmsPEQi~g~~y~~k---vdIyaLGlil~ 453 (516)
T KOG1033|consen 404 TSQDKDETV--APAAASHTQQVGTLLYMSPEQIRGQQYSEK---VDIYALGLILA 453 (516)
T ss_pred eecccCCcc--cchhhhhhhcccccccCCHHHHhhhhhhhh---cchhhHHHHHH
Confidence 776544421 223345667899999999999999998766 99999999998
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.9e-15 Score=166.20 Aligned_cols=220 Identities=16% Similarity=0.088 Sum_probs=146.2
Q ss_pred CCCCCCeEeecCCeeEEE-------EEeehhhhhh-hhhhHHHHH---HHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 481 NFSPANKIREGGFNIVYN-------VAMKVANLKQ-KEASRSFAA---EFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~-------vavK~~~~~~-~~~~~~~~~---E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
+|...+.+|++.|=+|.+ |.||++-++. .-..+.|.+ |++ ....+|||++++.-+-......|+|=+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 566778899999988886 7888875544 223344443 444 5556899999988776667778888888
Q ss_pred ccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 550 ISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 550 ~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
....... ..-+...+.+.|+.|++.|+.-+|.. +|.|+|||.+||||+.-.-+.++||..-+..+-......
T Consensus 103 vkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa- 178 (1431)
T KOG1240|consen 103 VKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA- 178 (1431)
T ss_pred HhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCCCcc-
Confidence 8654433 22357788999999999999999999 999999999999999777899999976654332111100
Q ss_pred ccccccccccccccccccccccccc--c-----cc-CCCccceeeccceeec--cccccccc---hhh------------
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARN--L-----EN-REKRHTVMSFPQRFAL--NEKKQNKS---ILK------------ 680 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~--~-----~~-~~~~~DiwSlG~i~~~--~~~~~~~~---i~~------------ 680 (746)
.......+-.--.+|.|||.+.... . .. -+++.||||+|||++. .+...+.. .+.
T Consensus 179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~ 258 (1431)
T KOG1240|consen 179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQL 258 (1431)
T ss_pred cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHH
Confidence 0000111111234799999987522 0 01 1567999999999981 11111111 110
Q ss_pred ccccCCCccHHHHHHhhCCCCCCCC
Q 041467 681 SAGIKGKKTVSFFLSLLSPSCSVFP 705 (746)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~p 705 (746)
....++.....++.+|++.++++|-
T Consensus 259 Le~Ied~~~Rnlil~Mi~rdPs~Rl 283 (1431)
T KOG1240|consen 259 LEKIEDVSLRNLILSMIQRDPSKRL 283 (1431)
T ss_pred HHhCcCccHHHHHHHHHccCchhcc
Confidence 1223445677888899988776544
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.2e-14 Score=163.15 Aligned_cols=90 Identities=26% Similarity=0.309 Sum_probs=71.5
Q ss_pred HHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC-------CCccccccccccccccccccccc
Q 041467 573 AFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG-------TTAETASSSIGINGTVGYVAPVI 645 (746)
Q Consensus 573 ~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~-------~~~~~~~~~~~~~gt~~Y~aPE~ 645 (746)
+.|++|+|+. +|||||+||+|.+|+.-|++|++|||+++..-..... ............+||+.|+|||+
T Consensus 153 vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeV 229 (1205)
T KOG0606|consen 153 VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEV 229 (1205)
T ss_pred hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhh
Confidence 6799999999 9999999999999999999999999998754221110 00111223345799999999999
Q ss_pred ccccccccCCCccceeeccceee
Q 041467 646 IAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 646 ~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+..+.|.. .+|+|++|+|+|
T Consensus 230 ilrqgygk---pvdwwamGiIly 249 (1205)
T KOG0606|consen 230 ILRQGYGK---PVDWWAMGIILY 249 (1205)
T ss_pred hhhhccCC---CccHHHHHHHHH
Confidence 99988754 599999999998
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.8e-15 Score=158.71 Aligned_cols=182 Identities=26% Similarity=0.437 Sum_probs=145.4
Q ss_pred CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhc
Q 041467 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANL 206 (746)
Q Consensus 127 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 206 (746)
.++.-...||+.|++. .+|..+..+..|+.|.|..|.+.. +|..+.++..|++|||+.|+++ .+|..++.+
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r~-------ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~l 143 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIRT-------IPEAICNLEALTFLDLSSNQLS-HLPDGLCDL 143 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhcccee-------cchhhhhhhHHHHhhhccchhh-cCChhhhcC
Confidence 4556677888888887 677778888888888888888874 6667888888888999999887 778888888
Q ss_pred ccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhh
Q 041467 207 SSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLF 286 (746)
Q Consensus 207 ~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~ 286 (746)
+ |+.|-+++|+++ .+|+.++.+..|..||.+.|++. .+|..++.+.+|+.|++..|++.
T Consensus 144 p--Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~----------------- 202 (722)
T KOG0532|consen 144 P--LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE----------------- 202 (722)
T ss_pred c--ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-----------------
Confidence 6 888889999887 58888888888888888888886 67777888888888888888876
Q ss_pred ccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhh
Q 041467 287 NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVG 347 (746)
Q Consensus 287 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~ 347 (746)
.+|..++.| .|..||+|.|+++ .+|-.|..|..| ++|-|.+|.+. ..|..+.
T Consensus 203 -----~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~L-q~l~LenNPLq-SPPAqIC 254 (722)
T KOG0532|consen 203 -----DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHL-QVLQLENNPLQ-SPPAQIC 254 (722)
T ss_pred -----hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhh-eeeeeccCCCC-CChHHHH
Confidence 456666644 3788888888887 788888888888 57888888887 5666654
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-13 Score=138.54 Aligned_cols=124 Identities=19% Similarity=0.145 Sum_probs=92.5
Q ss_pred CCeEe-ecCCeeEEE-------EEeehhhhhh-------------hhhhHHHHHHHHHhhcCCCCce--eeEEEEEecCC
Q 041467 485 ANKIR-EGGFNIVYN-------VAMKVANLKQ-------------KEASRSFAAEFNALRNIRHRNL--IKIITICSSID 541 (746)
Q Consensus 485 ~~~ig-~g~~g~v~~-------vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~HpnI--v~l~~~~~~~~ 541 (746)
...+| .||.|+||. ++||.+.... .....++.+|++++++++|++| ++.+++.....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 45676 777777775 7888664211 1123468899999999998885 67777654432
Q ss_pred -c---ccchhhhccC-Cccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccc
Q 041467 542 -F---EGFDFKAISN-GQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612 (746)
Q Consensus 542 -~---~~lv~e~~~~-g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGl 612 (746)
. .++|||++++ .++. ...++.. .+.+++.++++||+. ||+||||||+|||++.++.++|+|||.
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LIDfg~ 188 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEAPLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLIDFDR 188 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcCCCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEECCC
Confidence 2 2499999987 4554 2233333 367899999999999 999999999999999989999999999
Q ss_pred ccc
Q 041467 613 AKF 615 (746)
Q Consensus 613 a~~ 615 (746)
++.
T Consensus 189 ~~~ 191 (239)
T PRK01723 189 GEL 191 (239)
T ss_pred ccc
Confidence 875
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.5e-13 Score=133.81 Aligned_cols=124 Identities=22% Similarity=0.232 Sum_probs=91.1
Q ss_pred CCeEeecCCeeEEE--------EEeehhhhhhhh--hhH----------------------HHHHHHHHhhcCCCCc--e
Q 041467 485 ANKIREGGFNIVYN--------VAMKVANLKQKE--ASR----------------------SFAAEFNALRNIRHRN--L 530 (746)
Q Consensus 485 ~~~ig~g~~g~v~~--------vavK~~~~~~~~--~~~----------------------~~~~E~~~l~~l~Hpn--I 530 (746)
.+.||+|+||.||+ ||||++...... ... ....|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999997 899987542110 111 1245677777775543 4
Q ss_pred eeEEEEEecCCcccchhhhccCCccccc---CCCH-HHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCCeeeCCCCcE
Q 041467 531 IKIITICSSIDFEGFDFKAISNGQLRLC---NLSL-TQRVNIAIDVAFAIEYLRH-HCQPSIVHGDLKPSNILLDQDVVT 605 (746)
Q Consensus 531 v~l~~~~~~~~~~~lv~e~~~~g~l~~~---~l~~-~~~~~i~~~i~~~l~yLH~-~~~~~ivHrDlkp~NILl~~~~~~ 605 (746)
.+.+++ ...++||||+++|.+... .... .++..++.+++.++.++|+ . +|+|||+||+||+++ ++.+
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~-~~~~ 153 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD-DGKV 153 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-CCcE
Confidence 444443 246899999998544311 1111 6788999999999999999 7 999999999999999 8999
Q ss_pred EEccccccccc
Q 041467 606 HVGDLGLAKFL 616 (746)
Q Consensus 606 ki~DfGla~~~ 616 (746)
+++|||.|+..
T Consensus 154 ~liDfg~a~~~ 164 (187)
T cd05119 154 YIIDVPQAVEI 164 (187)
T ss_pred EEEECcccccc
Confidence 99999999764
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.7e-15 Score=155.06 Aligned_cols=195 Identities=27% Similarity=0.425 Sum_probs=148.6
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
++--...||+.|++. ++|..+..+..|+.|.|++|.|. .+|..+.++..|.+|||+.|++ ..+|..++.|
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~Nql-S~lp~~lC~l------- 143 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQL-SHLPDGLCDL------- 143 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchh-hcCChhhhcC-------
Confidence 444556777777775 67777777777777777777776 5777777777777777777766 3344444322
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccc
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 176 (746)
-|+.|-+++|+++ .+|..++.+..|..||.+.|.+.. +|
T Consensus 144 ---------------------------------pLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~s-------lp 182 (722)
T KOG0532|consen 144 ---------------------------------PLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQS-------LP 182 (722)
T ss_pred ---------------------------------cceeEEEecCccc-cCCcccccchhHHHhhhhhhhhhh-------ch
Confidence 4778888889887 677888888999999999999975 66
Q ss_pred ccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCC--
Q 041467 177 NLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE-- 254 (746)
Q Consensus 177 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-- 254 (746)
..++++.+|+.|.+..|++. .+|..+..++ |..||+++|+++ .+|-.|.+|..|++|-|.+|-+. ..|..++.
T Consensus 183 sql~~l~slr~l~vrRn~l~-~lp~El~~Lp--Li~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kG 257 (722)
T KOG0532|consen 183 SQLGYLTSLRDLNVRRNHLE-DLPEELCSLP--LIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKG 257 (722)
T ss_pred HHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc--eeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhcc
Confidence 77889999999999999997 7788888775 999999999998 68999999999999999999987 55655543
Q ss_pred -CCCCceeeccccc
Q 041467 255 -TPNLQLLNIGGNH 267 (746)
Q Consensus 255 -l~~L~~L~Ls~N~ 267 (746)
..-.++|+..-++
T Consensus 258 kVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 258 KVHIFKYLSTQACQ 271 (722)
T ss_pred ceeeeeeecchhcc
Confidence 3344666666553
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-13 Score=139.07 Aligned_cols=172 Identities=20% Similarity=0.232 Sum_probs=103.4
Q ss_pred CCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCC----------CceeeEEEEEec
Q 041467 482 FSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRH----------RNLIKIITICSS 539 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~H----------pnIv~l~~~~~~ 539 (746)
+...+.||.|+++.||. +|+|+..... ....+.+++|.-....+.+ -.++--++....
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 34578999999999997 7999865332 3345667777766655432 122222222111
Q ss_pred CC-----------------cccchhhhccCCccc------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEc
Q 041467 540 ID-----------------FEGFDFKAISNGQLR------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHG 590 (746)
Q Consensus 540 ~~-----------------~~~lv~e~~~~g~l~------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHr 590 (746)
.+ ..+++|+-+ .++|. ...+....+..+-.|+++.+++||+. |+||+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 10 112333333 23332 11223445566778999999999999 99999
Q ss_pred CCCCCCeeeCCCCcEEEccccccccccCCCCCCCccccccccccccccccccccccccc-----ccccCCCccceeeccc
Q 041467 591 DLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR-----NLENREKRHTVMSFPQ 665 (746)
Q Consensus 591 Dlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~~~~~~DiwSlG~ 665 (746)
||||+|++++.+|.++++||+....... .......+..|.+||..... ....++.+.|.|++|+
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~-----------~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~ 238 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGT-----------RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGI 238 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTE-----------EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCc-----------eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHH
Confidence 9999999999999999999987765321 11113345789999987653 1222355699999999
Q ss_pred eee
Q 041467 666 RFA 668 (746)
Q Consensus 666 i~~ 668 (746)
++|
T Consensus 239 ~ly 241 (288)
T PF14531_consen 239 TLY 241 (288)
T ss_dssp HHH
T ss_pred HHH
Confidence 998
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.6e-14 Score=158.40 Aligned_cols=179 Identities=21% Similarity=0.263 Sum_probs=144.0
Q ss_pred hcCCCCCCeEeecCCeeEEE----------EEeehhhhhh--hhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN----------VAMKVANLKQ--KEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~----------vavK~~~~~~--~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~l 545 (746)
...|...+.||+|+|+.|-. +|+|.+.... .........|..+-+.+. |+|++.+++.....+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 45677888899999998874 6777765443 223344556888888887 9999999999999999999
Q ss_pred hhhhccCCcccc------c-CCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEEcCCCCCCeeeCCCC-cEEEccccccccc
Q 041467 546 DFKAISNGQLRL------C-NLSLTQRVNIAIDVAFAIEYLR-HHCQPSIVHGDLKPSNILLDQDV-VTHVGDLGLAKFL 616 (746)
Q Consensus 546 v~e~~~~g~l~~------~-~l~~~~~~~i~~~i~~~l~yLH-~~~~~~ivHrDlkp~NILl~~~~-~~ki~DfGla~~~ 616 (746)
.+++..+|++.. . ..+...+..++.|+..|+.|+| +. ++.|||+||+|.+++..+ ..|++|||+|...
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 999988877651 1 4567788899999999999999 77 999999999999999999 9999999999877
Q ss_pred cC-CCCCCCcccccccccccc-cccccccccccccccccCCCccceeeccceee
Q 041467 617 YG-YEPGTTAETASSSIGING-TVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~-~~~~~~~~~~~~~~~~~g-t~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. .... ......+| ++.|+|||...+..+. .+..|+||.|+++.
T Consensus 176 ~~~~g~~------~~~~~~~g~s~~y~a~E~~~~~~~~--~~~~d~~S~g~~l~ 221 (601)
T KOG0590|consen 176 RNKNGAE------RSLKDRCGSSPPYGAPEHLSGKAYR--GPSVDVWSLGIVLS 221 (601)
T ss_pred cccCCcc------eeeecccCCCCCCCCcccccchhhc--CCCccccccccccc
Confidence 54 2221 22334677 9999999999987664 44799999999887
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.7e-12 Score=140.61 Aligned_cols=197 Identities=29% Similarity=0.365 Sum_probs=129.4
Q ss_pred EEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCccc-
Q 041467 46 RLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLS- 124 (746)
Q Consensus 46 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~- 124 (746)
.|+++.|.+.. .+..+..++.++.|++.+|.+.. ++.....+. .+|+.|++++|++..
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~~-i~~~~~~~~-------------------~nL~~L~l~~N~i~~l 155 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNITD-IPPLIGLLK-------------------SNLKELDLSDNKIESL 155 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCccccc-Cccccccch-------------------hhcccccccccchhhh
Confidence 57777777642 33445555777777777777633 333222211 255566666666643
Q ss_pred ---ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCCh
Q 041467 125 ---LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPH 201 (746)
Q Consensus 125 ---l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 201 (746)
+..+++|+.|++++|+++. +|...+.+++|+.|++++|+++. +|.....+..|++|++++|.+. ..+.
T Consensus 156 ~~~~~~l~~L~~L~l~~N~l~~-l~~~~~~~~~L~~L~ls~N~i~~-------l~~~~~~~~~L~~l~~~~N~~~-~~~~ 226 (394)
T COG4886 156 PSPLRNLPNLKNLDLSFNDLSD-LPKLLSNLSNLNNLDLSGNKISD-------LPPEIELLSALEELDLSNNSII-ELLS 226 (394)
T ss_pred hhhhhccccccccccCCchhhh-hhhhhhhhhhhhheeccCCcccc-------CchhhhhhhhhhhhhhcCCcce-ecch
Confidence 3467777777777777773 34444467778888888887764 3343344556888888888544 4566
Q ss_pred hhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccc
Q 041467 202 SIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSL 276 (746)
Q Consensus 202 ~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l 276 (746)
.+.++. .+..+.+.+|++.. ++..++.+.+|++|++++|.++. ++. ++.+.+|+.|++++|.+....+...
T Consensus 227 ~~~~~~-~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 227 SLSNLK-NLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred hhhhcc-cccccccCCceeee-ccchhccccccceeccccccccc-ccc-ccccCccCEEeccCccccccchhhh
Confidence 677776 67777788888763 47778888888888888888874 333 7788888888888888876555433
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.9e-13 Score=154.39 Aligned_cols=175 Identities=17% Similarity=0.171 Sum_probs=130.4
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCC---CCceeeEEEEEecCCcccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIR---HRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~~~~~~~~~~~lv~ 547 (746)
-..|.+.+.||+|+||.||. ||+|+-+... .-+|--=.+++.+|+ -|-|+.+..++...+.-++|+
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~---~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ 773 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN---PWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVS 773 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCC---ceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeee
Confidence 35677889999999999996 8999864321 001111112233333 233444555555667788999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-------CCCcEEEcccccccc
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-------QDVVTHVGDLGLAKF 615 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-------~~~~~ki~DfGla~~ 615 (746)
||.+.|+|- ....+|.-+..+..|+++.++.||.. +|||+||||+|.||. +..-++|+|||.+-.
T Consensus 774 ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD 850 (974)
T KOG1166|consen 774 EYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID 850 (974)
T ss_pred eccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence 999999985 45688999999999999999999999 999999999999993 234689999999876
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.--.. .+.-.+.++|-.+-.+|...|...+.- +|-|.+..++|
T Consensus 851 m~lfp~------~~~F~~~~~td~f~C~EM~~grpWtYq---~DyfGlAa~~h 894 (974)
T KOG1166|consen 851 MKLFPD------GTKFKAVWHTDLFDCIEMREGRPWTYQ---IDYFGLAATVH 894 (974)
T ss_pred eeEcCC------CcEEeeeeccccchhHHHhcCCCCchh---hhhHHHHHHHH
Confidence 532221 233445788999999999999988755 99999997777
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.8e-12 Score=140.42 Aligned_cols=195 Identities=28% Similarity=0.430 Sum_probs=114.5
Q ss_pred EEeccCCCc-c---cccCCCCCcEeeCccCcccccCCccccCCC-CCCEEEccCCCCCCCCCCCccccccccCCCCCCEE
Q 041467 114 LLSLAFNQF-L---SLSNASSLEMIEFSRNQFSGGVSVDFSRLK-NLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188 (746)
Q Consensus 114 ~L~Ls~N~l-~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L 188 (746)
.++++.|++ . .+..++.++.|++.+|.++. ++.....++ +|+.|++++|.+.. +|..+..+++|+.|
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~~-------l~~~~~~l~~L~~L 168 (394)
T COG4886 97 SLDLNLNRLRSNISELLELTNLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIES-------LPSPLRNLPNLKNL 168 (394)
T ss_pred eeeccccccccCchhhhcccceeEEecCCccccc-Cccccccchhhcccccccccchhh-------hhhhhhcccccccc
Confidence 455555555 1 23344556666666666663 333444443 66677777766653 33345666667777
Q ss_pred EcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccc
Q 041467 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL 268 (746)
Q Consensus 189 ~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 268 (746)
++++|+++ .+|...+... .|+.|++++|+++ .+|.....+..|++|++++|.+. ..+..+.++.++..|.+++|++
T Consensus 169 ~l~~N~l~-~l~~~~~~~~-~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~ 244 (394)
T COG4886 169 DLSFNDLS-DLPKLLSNLS-NLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKL 244 (394)
T ss_pred ccCCchhh-hhhhhhhhhh-hhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCcee
Confidence 77777666 4454443444 5666666666666 45555555555666666666433 3445566666666666666665
Q ss_pred cccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchh
Q 041467 269 QGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPE 345 (746)
Q Consensus 269 ~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~ 345 (746)
. .++..++.++++++|++++|+++ .++. ++.+..+ ..|++++|.++...|..
T Consensus 245 ~----------------------~~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l-~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 245 E----------------------DLPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNL-RELDLSGNSLSNALPLI 296 (394)
T ss_pred e----------------------eccchhccccccceecccccccc-cccc-ccccCcc-CEEeccCccccccchhh
Confidence 5 22455666666777777777776 4444 6666666 46777777776544433
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-11 Score=142.07 Aligned_cols=116 Identities=28% Similarity=0.480 Sum_probs=91.7
Q ss_pred ChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCC
Q 041467 280 TLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPE 359 (746)
Q Consensus 280 ~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~ 359 (746)
..|++.+|.+.|.+|..++.+++|+.|+|++|+++|.+|..+..+..| +.|+|++|+++|.+|..+++
T Consensus 421 ~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L-~~LdLs~N~lsg~iP~~l~~----------- 488 (623)
T PLN03150 421 DGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSL-EVLDLSYNSFNGSIPESLGQ----------- 488 (623)
T ss_pred EEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCC-CEEECCCCCCCCCCchHHhc-----------
Confidence 344455677778888889999999999999999999999999999998 68999999999888887764
Q ss_pred CCCCCCCCCEEEccCCcCcccCCCCC--ccCCCCeeeEecCCCcCCCCCCCCCCccC
Q 041467 360 YPENLSFFELLNLSYNYFGSEVPTKG--VFNNKTRFSIIGNGKLCGGLDELHLPSCR 414 (746)
Q Consensus 360 ~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~~~~~~~~~~n~~l~~~~~~~~~~~~~ 414 (746)
+++|+.|+|++|+++|.+|..- .......+.+.+|+.+||. +. +..|.
T Consensus 489 ----L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~-p~--l~~C~ 538 (623)
T PLN03150 489 ----LTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGI-PG--LRACG 538 (623)
T ss_pred ----CCCCCEEECcCCcccccCChHHhhccccCceEEecCCccccCC-CC--CCCCc
Confidence 4566889999999999999642 2234567889999999984 22 34564
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.7e-11 Score=130.79 Aligned_cols=130 Identities=17% Similarity=0.131 Sum_probs=89.2
Q ss_pred CCeEeecCCeeEEE--------EEeehhhhhhhh------------------------------h----------hHHHH
Q 041467 485 ANKIREGGFNIVYN--------VAMKVANLKQKE------------------------------A----------SRSFA 516 (746)
Q Consensus 485 ~~~ig~g~~g~v~~--------vavK~~~~~~~~------------------------------~----------~~~~~ 516 (746)
.+.||+|++|.||+ ||||+.+..-.+ . .-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 46899999999997 999986422000 0 01356
Q ss_pred HHHHHhhcCC-----CCceeeEEEEEecCCcccchhhhccCCcccccC-CC--HHHHHHHHHHHHH-HHHHHHhcCCCCe
Q 041467 517 AEFNALRNIR-----HRNLIKIITICSSIDFEGFDFKAISNGQLRLCN-LS--LTQRVNIAIDVAF-AIEYLRHHCQPSI 587 (746)
Q Consensus 517 ~E~~~l~~l~-----HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~~~~-l~--~~~~~~i~~~i~~-~l~yLH~~~~~~i 587 (746)
+|++.+.+++ +|+|.--.-++......++||||++++++.... .. ...+..++.+++. .+..+|.. ++
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~---g~ 278 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRD---GF 278 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhC---Cc
Confidence 6777776663 344322111222234578999999998875210 00 0134567777666 46788888 99
Q ss_pred EEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 588 VHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 588 vHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
+|+|+||.||+++++++++++|||++..+.
T Consensus 279 ~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 279 FHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred eeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 999999999999999999999999998763
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.2e-11 Score=113.83 Aligned_cols=124 Identities=16% Similarity=0.067 Sum_probs=91.3
Q ss_pred CCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCcee-eEEEEEecCCcccchhhhccCCccc
Q 041467 485 ANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLI-KIITICSSIDFEGFDFKAISNGQLR 556 (746)
Q Consensus 485 ~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv-~l~~~~~~~~~~~lv~e~~~~g~l~ 556 (746)
.+.++.|.++.||+ |++|+...... ....+.+|+++++.+.+.+++ +++++. ....++||||+++..+.
T Consensus 3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eeecCCcccCceEEEEECCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 45678899999996 88888653321 223468899999998765544 455443 23457999999988775
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 557 LCNLSLTQRVNIAIDVAFAIEYLRHHC--QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 557 ~~~l~~~~~~~i~~~i~~~l~yLH~~~--~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.. ......++.+++++++.||+.. ...++|+|++|.||+++ ++.++++|||.|..
T Consensus 80 ~~---~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 80 TE---DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cc---cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 32 1223456789999999999983 12369999999999999 67899999999864
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.6e-10 Score=132.61 Aligned_cols=116 Identities=31% Similarity=0.451 Sum_probs=95.1
Q ss_pred CCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCc
Q 041467 233 NLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNK 312 (746)
Q Consensus 233 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 312 (746)
.++.|+|++|.+.|.+|..++.+++|+.|+|++|.++| .+|..++.+++|+.|+|++|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g---------------------~iP~~~~~l~~L~~LdLs~N~ 477 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRG---------------------NIPPSLGSITSLEVLDLSYNS 477 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccC---------------------cCChHHhCCCCCCEEECCCCC
Confidence 37789999999999999999999999999999988764 566677888889999999999
Q ss_pred CccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCCCC
Q 041467 313 LTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPTK 384 (746)
Q Consensus 313 l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p~~ 384 (746)
++|.+|..+..+.+| +.|+|++|+++|.+|..++.+ ...+..+++++|......|..
T Consensus 478 lsg~iP~~l~~L~~L-~~L~Ls~N~l~g~iP~~l~~~--------------~~~~~~l~~~~N~~lc~~p~l 534 (623)
T PLN03150 478 FNGSIPESLGQLTSL-RILNLNGNSLSGRVPAALGGR--------------LLHRASFNFTDNAGLCGIPGL 534 (623)
T ss_pred CCCCCchHHhcCCCC-CEEECcCCcccccCChHHhhc--------------cccCceEEecCCccccCCCCC
Confidence 999999999999998 689999999999999887643 123456778887755555543
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-11 Score=123.67 Aligned_cols=244 Identities=19% Similarity=0.257 Sum_probs=150.9
Q ss_pred hhhhCCccCcEEecccCcCCcc----CCccccCCCCCCeeeCcCCCCCC----ccchhhcCCCCCCEEEccCCCCcCccc
Q 041467 36 HQIGRLISLERLILSNNSFSCA----IPANLSSGSNLIKLSTDSNNLVR----DILTEICSLFKLERLRIDCGGRIDSLG 107 (746)
Q Consensus 36 ~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~l~~~~~~~~~~ 107 (746)
+....+.+++.|+||+|.|... +-..+.+.++|+.-++++= ++| .+|..+.- ..+++.
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~-------------l~~aL~ 89 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKM-------------LSKALL 89 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHH-------------HHHHHh
Confidence 3445567778888888877532 2334555566666666532 222 22222211 013455
Q ss_pred CCCCCCEEeccCCCcc---------cccCCCCCcEeeCccCcccccCCc-------------cccCCCCCCEEEccCCCC
Q 041467 108 HLKSLLLLSLAFNQFL---------SLSNASSLEMIEFSRNQFSGGVSV-------------DFSRLKNLSWLNLGVNNL 165 (746)
Q Consensus 108 ~l~~L~~L~Ls~N~l~---------~l~~l~~L~~L~Ls~N~l~~~~~~-------------~~~~l~~L~~L~Ls~N~l 165 (746)
..+.|+.|+||.|.|. -+..+++|+.|+|.+|.+.-.--. -.+.-++|+.+..++|++
T Consensus 90 ~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrl 169 (382)
T KOG1909|consen 90 GCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRL 169 (382)
T ss_pred cCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecccc
Confidence 6678889999999882 245688999999999877521111 123457788888888888
Q ss_pred CCCCCCCccccccccCCCCCCEEEccccccccc----CChhhhhcccccceEEcccCcccc----cCCccccCCCCCCee
Q 041467 166 GSGTANELDFINLLTNCSKLERLYFNRNGFEGV----LPHSIANLSSTIKQIAMGSNRISS----TIPHGIRNLVNLNWL 237 (746)
Q Consensus 166 ~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~~L~~L~l~~N~i~~----~~p~~~~~l~~L~~L 237 (746)
...... .+...|...+.|+.+.++.|.|... +-..+...+ .|+.|||.+|-++. .+...+..+++|++|
T Consensus 170 en~ga~--~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~-~LevLdl~DNtft~egs~~LakaL~s~~~L~El 246 (382)
T KOG1909|consen 170 ENGGAT--ALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCP-HLEVLDLRDNTFTLEGSVALAKALSSWPHLREL 246 (382)
T ss_pred ccccHH--HHHHHHHhccccceEEEecccccCchhHHHHHHHHhCC-cceeeecccchhhhHHHHHHHHHhcccchheee
Confidence 654332 3445677778888888888877511 123344555 68888888888762 233456667788888
Q ss_pred ecccccceecCCcCC-----CCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCc
Q 041467 238 TMESSQLIGTIPPLI-----GETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNK 312 (746)
Q Consensus 238 ~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 312 (746)
++++|.+...-...| ...++|+.|.+.+|.++..--. .+-..+...+.|..|+|++|.
T Consensus 247 ~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~-----------------~la~~~~ek~dL~kLnLngN~ 309 (382)
T KOG1909|consen 247 NLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAAL-----------------ALAACMAEKPDLEKLNLNGNR 309 (382)
T ss_pred cccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHH-----------------HHHHHHhcchhhHHhcCCccc
Confidence 888887763322222 2367888888888887621100 122234456778888888888
Q ss_pred C
Q 041467 313 L 313 (746)
Q Consensus 313 l 313 (746)
+
T Consensus 310 l 310 (382)
T KOG1909|consen 310 L 310 (382)
T ss_pred c
Confidence 8
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.7e-11 Score=127.36 Aligned_cols=176 Identities=20% Similarity=0.194 Sum_probs=134.1
Q ss_pred CCCCCeEee--cCCeeEEE-----------EEeehhhh--hhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccc
Q 041467 482 FSPANKIRE--GGFNIVYN-----------VAMKVANL--KQKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 482 ~~~~~~ig~--g~~g~v~~-----------vavK~~~~--~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~l 545 (746)
+.....+|. |.+|.||. +|+|.-+. .......+-.+|+...++++ |+|.|+.+..+.+.+..++
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi 195 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI 195 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence 445677888 99999996 77877332 22233445567888888886 9999999999999999999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHH----HHHHHHhcCCCCeEEcCCCCCCeeeCCC-CcEEEccccccc
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAF----AIEYLRHHCQPSIVHGDLKPSNILLDQD-VVTHVGDLGLAK 614 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~----~l~yLH~~~~~~ivHrDlkp~NILl~~~-~~~ki~DfGla~ 614 (746)
-+|++. .++. ...++......+..+..+ |+.++|+. .|+|-|+||.||....+ ...+.+|||+..
T Consensus 196 qtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~~v~ 271 (524)
T KOG0601|consen 196 QTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFGLVS 271 (524)
T ss_pred eecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCcceeE
Confidence 999886 3332 233677788888888888 99999999 99999999999999988 889999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.+....-.. .........|-..|+|||+..+.. +...||||+|.++.
T Consensus 272 ~i~~~~~~~---~~~~~~r~~~~~~Y~~ke~~~~l~----~~~~di~sl~ev~l 318 (524)
T KOG0601|consen 272 KISDGNFSS---VFKVSKRPEGDCIYAAKELLNGLA----TFASDIFSLGEVIL 318 (524)
T ss_pred EccCCcccc---ceeeeecCCCCceEeChhhhcccc----chHhhhcchhhhhH
Confidence 875443211 111112235778899999988763 34599999998776
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.2e-11 Score=133.66 Aligned_cols=216 Identities=25% Similarity=0.284 Sum_probs=131.5
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
+.++.++...+.+.+.--. ...+..++.+++..|.|.. +-..+..+++|..|++.+|++.+....
T Consensus 49 ~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~~------------- 113 (414)
T KOG0531|consen 49 SDLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIENL------------- 113 (414)
T ss_pred chhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhcccc-------------
Confidence 3455566666655321111 1456667777777777763 334466777788888877776432110
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCccc---ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLS---LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~---l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
+..+++|++|+|++|+|.. +..++.|+.|++++|.|+.. ..+..+++|+.+++++|.+......
T Consensus 114 --------l~~~~~L~~L~ls~N~I~~i~~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~--- 180 (414)
T KOG0531|consen 114 --------LSSLVNLQVLDLSFNKITKLEGLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIEND--- 180 (414)
T ss_pred --------hhhhhcchheeccccccccccchhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhh---
Confidence 3455666667777777644 34556677777777777642 2355577788888888877642210
Q ss_pred ccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCC--CCeeecccccceecCCcCC
Q 041467 175 FINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVN--LNWLTMESSQLIGTIPPLI 252 (746)
Q Consensus 175 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~~~ 252 (746)
. ...+.+|+.+++.+|.+... ..+..+. .+..+++..|+++..-+ +..+.. |+.+++++|.+. ..+..+
T Consensus 181 --~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~-~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~ 251 (414)
T KOG0531|consen 181 --E-LSELISLEELDLGGNSIREI--EGLDLLK-KLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGL 251 (414)
T ss_pred --h-hhhccchHHHhccCCchhcc--cchHHHH-HHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccc
Confidence 1 35667788888888877632 2233332 35555777777764222 222333 788888888876 333556
Q ss_pred CCCCCCceeecccccccc
Q 041467 253 GETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 253 ~~l~~L~~L~Ls~N~l~~ 270 (746)
..+..+..|++.+|++..
T Consensus 252 ~~~~~l~~l~~~~n~~~~ 269 (414)
T KOG0531|consen 252 ENLKNLPVLDLSSNRISN 269 (414)
T ss_pred cccccccccchhhccccc
Confidence 677788888888888763
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.02 E-value=6.9e-11 Score=115.23 Aligned_cols=132 Identities=25% Similarity=0.310 Sum_probs=87.8
Q ss_pred CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhc
Q 041467 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANL 206 (746)
Q Consensus 127 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 206 (746)
....|+.||||+|.|+ .+..+..-++.++.|++|+|.|.. ...+..+++|+.||||+|.++ .+-.+--.+
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~--------v~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KL 351 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT--------VQNLAELPQLQLLDLSGNLLA-ECVGWHLKL 351 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee--------ehhhhhcccceEeecccchhH-hhhhhHhhh
Confidence 3456667777777766 344555666777777777777753 123566677777777777776 444444455
Q ss_pred ccccceEEcccCcccccCCccccCCCCCCeeecccccceecC-CcCCCCCCCCceeeccccccccc
Q 041467 207 SSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI-PPLIGETPNLQLLNIGGNHLQGS 271 (746)
Q Consensus 207 ~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~ 271 (746)
. +++.|.|+.|.|.. -..++.|-+|..||+++|++...- -..++++|.|+.|.|.+|.+.+.
T Consensus 352 G-NIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 352 G-NIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred c-CEeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 4 57777777777752 234667777888888888876321 24578888888888888888743
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.8e-10 Score=108.39 Aligned_cols=124 Identities=25% Similarity=0.236 Sum_probs=43.9
Q ss_pred ccccccccEEecccCcCcccCchhhh-CCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCC
Q 041467 14 CILRTFLRYINLVNNGFNGEIPHQIG-RLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKL 92 (746)
Q Consensus 14 ~~~~~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 92 (746)
......++.|+|++|.|+ .+. .++ .+.+|+.||||+|.|+. ++ .+..+++|+.|++++|.+... .+.+.
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~i-~~~l~----- 84 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISSI-SEGLD----- 84 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHH-----
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCcc-ccchH-----
Confidence 344557899999999997 443 465 58899999999999984 44 588899999999999998543 22221
Q ss_pred CEEEccCCCCcCcccCCCCCCEEeccCCCcc------cccCCCCCcEeeCccCcccccCC---ccccCCCCCCEEEcc
Q 041467 93 ERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL------SLSNASSLEMIEFSRNQFSGGVS---VDFSRLKNLSWLNLG 161 (746)
Q Consensus 93 ~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~------~l~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~Ls 161 (746)
..+++|+.|+|++|+|. .+..+++|+.|+|.+|.++...- ..+..+|+|+.||-.
T Consensus 85 --------------~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 85 --------------KNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp --------------HH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred --------------HhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 12445555555555553 34567888888888888774321 235678888888764
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.8e-11 Score=120.01 Aligned_cols=247 Identities=21% Similarity=0.306 Sum_probs=153.9
Q ss_pred cccccccEEecccCcCcc----cCchhhhCCccCcEEecccCcCCc----cCCcc-------ccCCCCCCeeeCcCCCCC
Q 041467 15 ILRTFLRYINLVNNGFNG----EIPHQIGRLISLERLILSNNSFSC----AIPAN-------LSSGSNLIKLSTDSNNLV 79 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~-------~~~l~~L~~L~L~~N~l~ 79 (746)
..+..+++|+||+|.|.. .+-..+.+.++|+.-++|+= ++| .+|+. +...++|++||||+|-+-
T Consensus 27 ~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 27 EPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred cccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 346789999999999963 24556778889999999853 333 23433 445679999999999985
Q ss_pred Cccchh----hcCCCCCCEEEccCCCCcCcccCC--CCCCEEeccCCCcccccCCCCCcEeeCccCcccccC----Cccc
Q 041467 80 RDILTE----ICSLFKLERLRIDCGGRIDSLGHL--KSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGV----SVDF 149 (746)
Q Consensus 80 ~~~~~~----~~~l~~L~~L~l~~~~~~~~~~~l--~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~----~~~~ 149 (746)
..-+.. +..++.|++|.|.++|.-+.=+.. ..|..|. .| .-.+.-+.|+++...+|++.... ...|
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~--~~--kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~ 181 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELA--VN--KKAASKPKLRVFICGRNRLENGGATALAEAF 181 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHH--HH--hccCCCcceEEEEeeccccccccHHHHHHHH
Confidence 444443 345566666666654432100000 0000000 00 11234567777777777775322 2235
Q ss_pred cCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEccccccccc----CChhhhhcccccceEEcccCcccccCC
Q 041467 150 SRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGV----LPHSIANLSSTIKQIAMGSNRISSTIP 225 (746)
Q Consensus 150 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~~L~~L~l~~N~i~~~~p 225 (746)
...+.|+.+.+++|.|..-.. ......|..|++|+.|||.+|-|+.. +...+...+ .|+.|+++++.+...-.
T Consensus 182 ~~~~~leevr~~qN~I~~eG~--~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~-~L~El~l~dcll~~~Ga 258 (382)
T KOG1909|consen 182 QSHPTLEEVRLSQNGIRPEGV--TALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWP-HLRELNLGDCLLENEGA 258 (382)
T ss_pred HhccccceEEEecccccCchh--HHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccc-hheeecccccccccccH
Confidence 566788888888887753111 12345677888888888888877632 223334444 68888888888764322
Q ss_pred ccc-----cCCCCCCeeecccccceec----CCcCCCCCCCCceeeccccccc
Q 041467 226 HGI-----RNLVNLNWLTMESSQLIGT----IPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 226 ~~~-----~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
.+| ...++|+.|.|.+|.++.. +-..+...+.|..|+|++|.+.
T Consensus 259 ~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 259 IAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 222 2367899999999988622 2334556889999999999983
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1e-10 Score=119.95 Aligned_cols=137 Identities=21% Similarity=0.221 Sum_probs=63.1
Q ss_pred CCCCCcEeeCccCcccccCC--ccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhh
Q 041467 127 NASSLEMIEFSRNQFSGGVS--VDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIA 204 (746)
Q Consensus 127 ~l~~L~~L~Ls~N~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 204 (746)
.+++++.||||+|-|....+ .....|++|+.|+|+.|++.....+.. -..+++|+.|.|+.+.++-.--.++.
T Consensus 144 ~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~-----~~~l~~lK~L~l~~CGls~k~V~~~~ 218 (505)
T KOG3207|consen 144 ILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNT-----TLLLSHLKQLVLNSCGLSWKDVQWIL 218 (505)
T ss_pred hCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccc-----hhhhhhhheEEeccCCCCHHHHHHHH
Confidence 34555555555554432211 112345555555555555543222211 11345566666666655421111111
Q ss_pred hcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCC--cCCCCCCCCceeeccccccc
Q 041467 205 NLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIP--PLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 205 ~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~ 269 (746)
...++|+.|+|..|...+.-......+..|++|||++|++.. .+ ...+.++.|..|+++.+.+.
T Consensus 219 ~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 219 LTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIA 284 (505)
T ss_pred HhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhhhccccCcc
Confidence 111245666666664332333344455566666666666542 22 23455666666666666555
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.8e-10 Score=105.53 Aligned_cols=119 Identities=25% Similarity=0.269 Sum_probs=32.9
Q ss_pred cccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCccc-CCCCCCEEeccCCCccc---
Q 041467 49 LSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLG-HLKSLLLLSLAFNQFLS--- 124 (746)
Q Consensus 49 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~-~l~~L~~L~Ls~N~l~~--- 124 (746)
|..+.|. .+| .+.+..++++|+|++|.+... +.++ .+.+|+.|+|++|++..
T Consensus 4 lt~~~i~-~~~-~~~n~~~~~~L~L~~n~I~~I----------------------e~L~~~l~~L~~L~Ls~N~I~~l~~ 59 (175)
T PF14580_consen 4 LTANMIE-QIA-QYNNPVKLRELNLRGNQISTI----------------------ENLGATLDKLEVLDLSNNQITKLEG 59 (175)
T ss_dssp --------------------------------------------------------S--TT-TT--EEE-TTS--S--TT
T ss_pred ccccccc-ccc-ccccccccccccccccccccc----------------------cchhhhhcCCCEEECCCCCCccccC
Confidence 3444444 233 344445667777777766321 2233 35667777777777744
Q ss_pred ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEccccccc
Q 041467 125 LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFE 196 (746)
Q Consensus 125 l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 196 (746)
++.++.|+.|++++|+|+.+.+.....+++|+.|+|++|+|.... -...+..+++|+.|+|.+|.++
T Consensus 60 l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L~~N~I~~l~-----~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 60 LPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYLSNNKISDLN-----ELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp ----TT--EEE--SS---S-CHHHHHH-TT--EEE-TTS---SCC-----CCGGGGG-TT--EEE-TT-GGG
T ss_pred ccChhhhhhcccCCCCCCccccchHHhCCcCCEEECcCCcCCChH-----HhHHHHcCCCcceeeccCCccc
Confidence 345577777777777777543322235777777777777776532 1234566777777777777665
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.4e-10 Score=119.14 Aligned_cols=209 Identities=22% Similarity=0.150 Sum_probs=110.4
Q ss_pred cccccEEecccCcCcccCc--hhhhCCccCcEEecccCcCCccCC--ccccCCCCCCeeeCcCCCCCCccchhhcCCCCC
Q 041467 17 RTFLRYINLVNNGFNGEIP--HQIGRLISLERLILSNNSFSCAIP--ANLSSGSNLIKLSTDSNNLVRDILTEICSLFKL 92 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 92 (746)
+.+|+...|.+.... ..+ +....|++++.||||+|-|....| .....|++|+.|+|+.|.+.-......
T Consensus 120 ~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~------ 192 (505)
T KOG3207|consen 120 LKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNT------ 192 (505)
T ss_pred HHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccc------
Confidence 455666777766664 333 355667777777777776653222 223456677777777776632211110
Q ss_pred CEEEccCCCCcCcccCCCCCCEEeccCCCccc------ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCC
Q 041467 93 ERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLS------LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLG 166 (746)
Q Consensus 93 ~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~------l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 166 (746)
-..+++|+.|.|+.+.++. +..+++|+.|+|+.|...+........+..|+.|||++|++-
T Consensus 193 -------------~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li 259 (505)
T KOG3207|consen 193 -------------TLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI 259 (505)
T ss_pred -------------hhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc
Confidence 0134556666666666631 335667777777777533344444555667777777777664
Q ss_pred CCCCCCccccccccCCCCCCEEEccccccccc-CChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccce
Q 041467 167 SGTANELDFINLLTNCSKLERLYFNRNGFEGV-LPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLI 245 (746)
Q Consensus 167 ~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~ 245 (746)
... .....+.++.|+.|.++.+.+... .|+. ..+ +--...++|++|+++.|++.
T Consensus 260 ~~~-----~~~~~~~l~~L~~Lnls~tgi~si~~~d~--------~s~------------~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 260 DFD-----QGYKVGTLPGLNQLNLSSTGIASIAEPDV--------ESL------------DKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred ccc-----cccccccccchhhhhccccCcchhcCCCc--------cch------------hhhcccccceeeecccCccc
Confidence 311 112345566666666666665521 1111 000 00123345666666666653
Q ss_pred ecC-CcCCCCCCCCceeecccccccc
Q 041467 246 GTI-PPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 246 ~~~-p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
..- -..+..+++|+.|.+..|.+..
T Consensus 315 ~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 315 DWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred cccccchhhccchhhhhhcccccccc
Confidence 110 0123445666777777777653
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.94 E-value=8.3e-10 Score=119.06 Aligned_cols=176 Identities=19% Similarity=0.153 Sum_probs=130.5
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE----------EEeehhhhhhhhh--hHHHHHHHHHhhcCC-CCceeeEEEEEecCCc
Q 041467 476 SKATNNFSPANKIREGGFNIVYN----------VAMKVANLKQKEA--SRSFAAEFNALRNIR-HRNLIKIITICSSIDF 542 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~----------vavK~~~~~~~~~--~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~ 542 (746)
.....+|..+..||.|.|+.|++ |++|.+...-... ...-..|+-+...+. |.++++.+..|.....
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 44567888999999999999986 6666554332111 122346776666665 8999999999988888
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC-CcEEEccccccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-VVTHVGDLGLAKFL 616 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~-~~~ki~DfGla~~~ 616 (746)
.|+--|||.+++.+ ...+++..++++..|++.|+.++|+. .++|+|+||+||++..+ +.-++.|||++..+
T Consensus 341 ~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred ccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccccccc
Confidence 88999999998876 45678889999999999999999988 99999999999999875 78899999988643
Q ss_pred cCCCCCCCccccccccccccccccc-ccccccc-cccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYV-APVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~-aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
.- ......++-+|+ ++|++.. ..+.. ++|++|+|.-++
T Consensus 418 ~~-----------~~~~~~~~~r~~p~~~~~~e~~~~~~---~~~~~sl~~~~~ 457 (524)
T KOG0601|consen 418 AF-----------SSGVFHHIDRLYPIAEILLEDYPHLS---KADIFSLGLSVD 457 (524)
T ss_pred ce-----------ecccccccccccccchhhcccccccc---cccccccccccc
Confidence 11 111133344555 3555544 44433 599999997665
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.6e-10 Score=112.63 Aligned_cols=126 Identities=28% Similarity=0.246 Sum_probs=83.8
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccC
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 99 (746)
|+.||||+|.|+ .+.++..-++.++.|++|+|.|.. + +.++.+.+|+.||||+|.+... -
T Consensus 286 LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls~~-~---------------- 345 (490)
T KOG1259|consen 286 LTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLAEC-V---------------- 345 (490)
T ss_pred hhhccccccchh-hhhhhhhhccceeEEeccccceee-e-hhhhhcccceEeecccchhHhh-h----------------
Confidence 556666666665 555666666666666666666652 2 2356666666666666655321 1
Q ss_pred CCCcCcccCCCCCCEEeccCCCccccc---CCCCCcEeeCccCcccccC-CccccCCCCCCEEEccCCCCCCCC
Q 041467 100 GGRIDSLGHLKSLLLLSLAFNQFLSLS---NASSLEMIEFSRNQFSGGV-SVDFSRLKNLSWLNLGVNNLGSGT 169 (746)
Q Consensus 100 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~---~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~ 169 (746)
..-..|.+.+.|.|+.|.+.+++ .+-+|..||+++|+|.... -..+++|+-|+.|.|.+|.+.+.+
T Consensus 346 ----Gwh~KLGNIKtL~La~N~iE~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 346 ----GWHLKLGNIKTLKLAQNKIETLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred ----hhHhhhcCEeeeehhhhhHhhhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 12234566778888888886554 4668889999999887432 245788999999999999987644
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.9e-10 Score=125.85 Aligned_cols=134 Identities=15% Similarity=0.141 Sum_probs=83.1
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhh----------------------------------hhhH---
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQK----------------------------------EASR--- 513 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~----------------------------------~~~~--- 513 (746)
..|+. +.+|+|++|.||+ ||||+.+..-. +..+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45666 7999999999997 99998853210 0011
Q ss_pred ---HHHHHHHHhhcCC----CCceeeEEEEEec-CCcccchhhhccCCccccc-CCCH--HHHHHHHHHHHHH-HHHHHh
Q 041467 514 ---SFAAEFNALRNIR----HRNLIKIITICSS-IDFEGFDFKAISNGQLRLC-NLSL--TQRVNIAIDVAFA-IEYLRH 581 (746)
Q Consensus 514 ---~~~~E~~~l~~l~----HpnIv~l~~~~~~-~~~~~lv~e~~~~g~l~~~-~l~~--~~~~~i~~~i~~~-l~yLH~ 581 (746)
++.+|+..+.+++ +...|.+-.++.+ ....++||||+.++.+... .+.. ..+..++...+++ +.-++.
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~ 278 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFR 278 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence 2455666555553 4333333333332 3467899999999877410 0100 0111222222221 222334
Q ss_pred cCCCCeEEcCCCCCCeeeCCCC----cEEEcccccccccc
Q 041467 582 HCQPSIVHGDLKPSNILLDQDV----VTHVGDLGLAKFLY 617 (746)
Q Consensus 582 ~~~~~ivHrDlkp~NILl~~~~----~~ki~DfGla~~~~ 617 (746)
. |++|+|+||.||+++.++ ++++.|||++..+.
T Consensus 279 ~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 279 D---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred C---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 5 999999999999999888 99999999998764
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.6e-10 Score=125.20 Aligned_cols=213 Identities=25% Similarity=0.283 Sum_probs=142.2
Q ss_pred ccCcEEecccCcCCccCCccc-cCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCC
Q 041467 42 ISLERLILSNNSFSCAIPANL-SSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFN 120 (746)
Q Consensus 42 ~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N 120 (746)
..++.++...+.+.+ ...+ ..+..++.+++..|.+... ...+..+++|..|++..|
T Consensus 49 ~~~~~~~~~~~~~~~--~~~~~~~l~~l~~l~l~~n~i~~~---------------------~~~l~~~~~l~~l~l~~n 105 (414)
T KOG0531|consen 49 SDLEEIDLIFNLDGS--DEDLVESLTSLKELNLRQNLIAKI---------------------LNHLSKLKSLEALDLYDN 105 (414)
T ss_pred chhhhhcchhccccc--hhhhHHHhHhHHhhccchhhhhhh---------------------hcccccccceeeeecccc
Confidence 355666666665542 1222 4566777777877766430 122556777888888888
Q ss_pred Ccccc----cCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEccccccc
Q 041467 121 QFLSL----SNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFE 196 (746)
Q Consensus 121 ~l~~l----~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 196 (746)
+|..+ ..+++|++|++++|+|+.+.+ +..++.|+.|++++|.|+.. ..+..+..|+.+++++|++.
T Consensus 106 ~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~~~--------~~~~~l~~L~~l~l~~n~i~ 175 (414)
T KOG0531|consen 106 KIEKIENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLISDI--------SGLESLKSLKLLDLSYNRIV 175 (414)
T ss_pred chhhcccchhhhhcchheeccccccccccc--hhhccchhhheeccCcchhc--------cCCccchhhhcccCCcchhh
Confidence 88544 457889999999999886543 56677799999999988752 23555788899999999887
Q ss_pred ccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCC--Cceeecccccccccccc
Q 041467 197 GVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN--LQLLNIGGNHLQGSILS 274 (746)
Q Consensus 197 ~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~~~ 274 (746)
..-+.....+. .++.+++.+|.+.. ..++..+..+..+++..|.+...-+. ..+.. |+.+++++|.+..
T Consensus 176 ~ie~~~~~~~~-~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~~~~~l--~~~~~~~L~~l~l~~n~i~~---- 246 (414)
T KOG0531|consen 176 DIENDELSELI-SLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKISKLEGL--NELVMLHLRELYLSGNRISR---- 246 (414)
T ss_pred hhhhhhhhhcc-chHHHhccCCchhc--ccchHHHHHHHHhhcccccceeccCc--ccchhHHHHHHhcccCcccc----
Confidence 44331034555 68888999998863 44555666677778888888744332 22333 7888888888772
Q ss_pred cccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCc
Q 041467 275 SLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT 314 (746)
Q Consensus 275 ~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 314 (746)
.+..+..+..+..|++++|++.
T Consensus 247 ------------------~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 247 ------------------SPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred ------------------ccccccccccccccchhhcccc
Confidence 2234455666677777777765
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-09 Score=84.51 Aligned_cols=61 Identities=34% Similarity=0.398 Sum_probs=55.5
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCC
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNL 78 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 78 (746)
++|++|+|++|+|+...+..|.++++|++|++++|+++...|..|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5789999999999977678999999999999999999988888999999999999999975
|
... |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.8e-09 Score=117.35 Aligned_cols=155 Identities=14% Similarity=0.180 Sum_probs=111.9
Q ss_pred EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCcccccCCCHHHHHHHHHHHHHHHHH
Q 041467 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEY 578 (746)
Q Consensus 499 vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~y 578 (746)
|.|.+.+...........+-++-|+.++||||+++++.++..+..|+|+|-+.-=......+.......-+.||+.||.|
T Consensus 40 vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~Pl~~~lk~l~~~~v~~Gl~qIl~AL~F 119 (690)
T KOG1243|consen 40 VSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRPLETVLKELGKEEVCLGLFQILAALSF 119 (690)
T ss_pred eEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccccHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 33333333333334456778889999999999999999999999999999873322222334567778889999999999
Q ss_pred HHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCcc
Q 041467 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRH 658 (746)
Q Consensus 579 LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~ 658 (746)
||+.| +++|+++.-+.|+++..|+.||++|-+++...+... ......---.|..|+.+..... + .
T Consensus 120 L~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--------~~~~~~~~~s~~~P~~~~~s~~--s---~ 184 (690)
T KOG1243|consen 120 LNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--------PAKSLYLIESFDDPEEIDPSEW--S---I 184 (690)
T ss_pred HhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--------ccccchhhhcccChhhcCcccc--c---h
Confidence 99877 999999999999999999999999988765422111 0001112235777777654432 3 8
Q ss_pred ceeeccceee
Q 041467 659 TVMSFPQRFA 668 (746)
Q Consensus 659 DiwSlG~i~~ 668 (746)
|.|-|||..+
T Consensus 185 D~~~Lg~li~ 194 (690)
T KOG1243|consen 185 DSWGLGCLIE 194 (690)
T ss_pred hhhhHHHHHH
Confidence 9999999877
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.7e-09 Score=125.05 Aligned_cols=247 Identities=23% Similarity=0.236 Sum_probs=110.3
Q ss_pred cccEEecccCc--CcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 19 FLRYINLVNNG--FNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 19 ~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
.|++|-+..|. +....++.|..++.|++||||+|.=-+.+|..++.|-+|++|+|++..+ ..+|..+.+|.+|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I-~~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGI-SHLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCc-cccchHHHHHHhhheec
Confidence 34444444443 3222222344455555555554443334555555555555555554444 24455555555555555
Q ss_pred ccCCCCc----CcccCCCCCCEEeccCCCc-------ccccCCCCCcEeeCccCcccccCCccccCCCCCC----EEEcc
Q 041467 97 IDCGGRI----DSLGHLKSLLLLSLAFNQF-------LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLS----WLNLG 161 (746)
Q Consensus 97 l~~~~~~----~~~~~l~~L~~L~Ls~N~l-------~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~Ls 161 (746)
+...+.. .....|++|++|.+..-.. ..+.++.+|+.+........ +-..+..++.|. .+.+.
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~~--~~e~l~~~~~L~~~~~~l~~~ 702 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSVL--LLEDLLGMTRLRSLLQSLSIE 702 (889)
T ss_pred cccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchhH--hHhhhhhhHHHHHHhHhhhhc
Confidence 5432221 2222344555554443321 22333444444444322220 011122222222 22221
Q ss_pred CCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChh---------hhhcccccceEEcccCcccccCCccccCCC
Q 041467 162 VNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHS---------IANLSSTIKQIAMGSNRISSTIPHGIRNLV 232 (746)
Q Consensus 162 ~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~---------~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~ 232 (746)
..... ..+..+..+.+|+.|.+.+..+....-.. |.++. .+...... .. ..+.+.--.+
T Consensus 703 ~~~~~-------~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~-~~~~~~~~--~~--r~l~~~~f~~ 770 (889)
T KOG4658|consen 703 GCSKR-------TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLS-KVSILNCH--ML--RDLTWLLFAP 770 (889)
T ss_pred ccccc-------eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHH-HHHhhccc--cc--cccchhhccC
Confidence 11111 23344566677777777776664221111 11111 11111111 11 1233334457
Q ss_pred CCCeeecccccceecCCcCCCCCCCCceeeccccccccc-ccccccccC
Q 041467 233 NLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGS-ILSSLGNLT 280 (746)
Q Consensus 233 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~l~~l~ 280 (746)
+|+.|.+..+.....+.+....+..+..+-+..+.+.+. ...+.+.++
T Consensus 771 ~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~ 819 (889)
T KOG4658|consen 771 HLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLP 819 (889)
T ss_pred cccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCc
Confidence 888888888877766666666666677666777777655 333444433
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.79 E-value=2e-08 Score=100.42 Aligned_cols=131 Identities=22% Similarity=0.326 Sum_probs=100.8
Q ss_pred CCeEeecCCeeEEE--------EEeehhhhhhh-hhhHHHHHHHHHhhcCCC--CceeeEEEEEecCC---cccchhhhc
Q 041467 485 ANKIREGGFNIVYN--------VAMKVANLKQK-EASRSFAAEFNALRNIRH--RNLIKIITICSSID---FEGFDFKAI 550 (746)
Q Consensus 485 ~~~ig~g~~g~v~~--------vavK~~~~~~~-~~~~~~~~E~~~l~~l~H--pnIv~l~~~~~~~~---~~~lv~e~~ 550 (746)
.+.++.|..+.||+ +++|+...... .....+.+|+++++.+++ ..+.+++.+..... ..+++|||+
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 35788999999998 56666543221 134568999999999976 44677777776643 568999999
Q ss_pred cCCcccc----cCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 041467 551 SNGQLRL----CNLSLTQRVNIAIDVAFAIEYLRHHC------------------------------------------- 583 (746)
Q Consensus 551 ~~g~l~~----~~l~~~~~~~i~~~i~~~l~yLH~~~------------------------------------------- 583 (746)
+++.+.. ..++..++..++.++++++++||+..
T Consensus 83 ~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (223)
T cd05154 83 DGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLR 162 (223)
T ss_pred CCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHH
Confidence 9887763 24778889999999999999999531
Q ss_pred ----------CCCeEEcCCCCCCeeeCC--CCcEEEcccccccc
Q 041467 584 ----------QPSIVHGDLKPSNILLDQ--DVVTHVGDLGLAKF 615 (746)
Q Consensus 584 ----------~~~ivHrDlkp~NILl~~--~~~~ki~DfGla~~ 615 (746)
...++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 163 ~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 163 WLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 66789999998864
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.74 E-value=8.1e-09 Score=79.81 Aligned_cols=60 Identities=25% Similarity=0.512 Sum_probs=45.7
Q ss_pred ccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccc
Q 041467 209 TIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL 268 (746)
Q Consensus 209 ~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 268 (746)
+|+.|++++|+|+...+++|.++++|++|++++|++....|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 477777777777765556777788888888888888777777778888888888887764
|
... |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.2e-08 Score=96.31 Aligned_cols=95 Identities=17% Similarity=0.158 Sum_probs=74.0
Q ss_pred HHHHHHHHhhcCCC--CceeeEEEEEecCCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHH-HhcCCC
Q 041467 514 SFAAEFNALRNIRH--RNLIKIITICSSIDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYL-RHHCQP 585 (746)
Q Consensus 514 ~~~~E~~~l~~l~H--pnIv~l~~~~~~~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yL-H~~~~~ 585 (746)
..++|++.|+++.. -++.+.+++ ...++||||+.++.+. ...++..+...+..+++.++.++ |..
T Consensus 72 wa~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~--- 144 (197)
T cd05146 72 WAEKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC--- 144 (197)
T ss_pred HHHHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC---
Confidence 35689999999863 466666664 4678999999765332 33445566778889999999999 667
Q ss_pred CeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 586 ~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
+|||+|+++.||+++ ++.+.|+|||-|-..
T Consensus 145 glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 145 NLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred CeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 999999999999996 478999999987653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.69 E-value=5.6e-09 Score=103.61 Aligned_cols=137 Identities=19% Similarity=0.271 Sum_probs=97.8
Q ss_pred HHhhcCCCCceeeEEEEEecCC-----cccchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 041467 520 NALRNIRHRNLIKIITICSSID-----FEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQP 585 (746)
Q Consensus 520 ~~l~~l~HpnIv~l~~~~~~~~-----~~~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~ 585 (746)
.-+-++.|.|||+++.||.+.. ...++.|||+.|++. ...+....-.+++.||..|+.|||+. .|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CC
Confidence 4455667999999999987744 356889999999885 34566777789999999999999986 77
Q ss_pred CeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeecc
Q 041467 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFP 664 (746)
Q Consensus 586 ~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG 664 (746)
+|+|+++...-|++..+|-+||.- +.-... ................|-++|-|||.-.....+. ++|||+||
T Consensus 198 piihgnlTc~tifiq~ngLIkig~-~ap~s~---h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~---a~dIy~fg 269 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGS-VAPDST---HPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTG---ASDIYKFG 269 (458)
T ss_pred ccccCCcchhheeecCCceEEecc-cCcccc---chhhhhhhHhhhhccccCCccccCCcCccccccc---chhhhhhh
Confidence 999999999999999999999852 111100 0000000001111234678999999866555544 49999999
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.6e-08 Score=89.54 Aligned_cols=98 Identities=26% Similarity=0.249 Sum_probs=74.9
Q ss_pred hHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcC
Q 041467 512 SRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGD 591 (746)
Q Consensus 512 ~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrD 591 (746)
..+-.+|++++.+++--.|..-+=+..+.+...++|||+++-.++.. + +.....++..+-.-+.-||.. +|||+|
T Consensus 43 r~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~-l-~~~~~~~~r~vG~~vg~lH~~---givHGD 117 (204)
T COG3642 43 RERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDA-L-EEARPDLLREVGRLVGKLHKA---GIVHGD 117 (204)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHH-H-HhcchHHHHHHHHHHHHHHhc---CeecCC
Confidence 34678999999998755554444455667777899999987766411 1 111466778888888899999 999999
Q ss_pred CCCCCeeeCCCCcEEEcccccccc
Q 041467 592 LKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 592 lkp~NILl~~~~~~ki~DfGla~~ 615 (746)
+.++||++..+. +.++|||++..
T Consensus 118 LTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 118 LTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CccceEEEeCCc-EEEEECCcccc
Confidence 999999997654 99999999975
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.1e-07 Score=111.76 Aligned_cols=298 Identities=21% Similarity=0.185 Sum_probs=148.8
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCc--CCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNS--FSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
....+...+-+|.+. .++..... +.|++|-+..|. +....++.|..++.|++|||++|.-.+.+|..|++|-+|++
T Consensus 522 ~~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 522 WNSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hhheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 356788888888886 56655543 379999999886 55334445777999999999988777888888888777777
Q ss_pred EEccCCCC---cCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCC
Q 041467 95 LRIDCGGR---IDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171 (746)
Q Consensus 95 L~l~~~~~---~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 171 (746)
|+++..+. |..+++|+.|.+| ++..+.-...+|.....|.+|++|.+-.-.....
T Consensus 600 L~L~~t~I~~LP~~l~~Lk~L~~L-------------------nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~--- 657 (889)
T KOG4658|consen 600 LDLSDTGISHLPSGLGNLKKLIYL-------------------NLEVTGRLESIPGILLELQSLRVLRLPRSALSND--- 657 (889)
T ss_pred ccccCCCccccchHHHHHHhhhee-------------------ccccccccccccchhhhcccccEEEeeccccccc---
Confidence 77766432 3444444444444 4444443333455555677777777754432110
Q ss_pred CccccccccCCCCCCEEEcccccccc-cCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCc
Q 041467 172 ELDFINLLTNCSKLERLYFNRNGFEG-VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP 250 (746)
Q Consensus 172 ~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 250 (746)
......+.++.+|+.+......... .-......+....+.+.+.++... ..+..++.+.+|+.|.+.++........
T Consensus 658 -~~~l~el~~Le~L~~ls~~~~s~~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~ 735 (889)
T KOG4658|consen 658 -KLLLKELENLEHLENLSITISSVLLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIE 735 (889)
T ss_pred -hhhHHhhhcccchhhheeecchhHhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcc
Confidence 0112233455555555553332200 000111111111122222121111 2233344444455554444444322211
Q ss_pred CCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccce
Q 041467 251 LIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLY 330 (746)
Q Consensus 251 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~ 330 (746)
.... .+.++ .+.++...... +--.-..+.+.--.++|+.|.+.++.....+.+....+..+ ..
T Consensus 736 ~~~~---~~~~~------------~f~~l~~~~~~-~~~~~r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l-~~ 798 (889)
T KOG4658|consen 736 WEES---LIVLL------------CFPNLSKVSIL-NCHMLRDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLEL-KE 798 (889)
T ss_pred cccc---cchhh------------hHHHHHHHHhh-ccccccccchhhccCcccEEEEecccccccCCCHHHHhhhc-cc
Confidence 1111 11110 01111111111 11111223334456789999999888776666655655555 33
Q ss_pred EEccCcccccc-CchhhhcccCCceeec
Q 041467 331 LELDNNLLNGS-LPPEVGNLKNLLRLHI 357 (746)
Q Consensus 331 L~Ls~N~l~~~-~p~~~~~l~~L~~L~l 357 (746)
+-+..+.+.+. .-.+.+.++++..+.+
T Consensus 799 ~i~~f~~~~~l~~~~~l~~l~~i~~~~l 826 (889)
T KOG4658|consen 799 LILPFNKLEGLRMLCSLGGLPQLYWLPL 826 (889)
T ss_pred EEecccccccceeeecCCCCceeEeccc
Confidence 55566666543 2233344444443333
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.2e-08 Score=108.10 Aligned_cols=167 Identities=16% Similarity=0.083 Sum_probs=121.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---EEeehhhhhhhhhhHHHHHHHHHhhcCCCCc-eeeEEEEEecCCcccchhhhccCC-
Q 041467 479 TNNFSPANKIREGGFNIVYN---VAMKVANLKQKEASRSFAAEFNALRNIRHRN-LIKIITICSSIDFEGFDFKAISNG- 553 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---vavK~~~~~~~~~~~~~~~E~~~l~~l~Hpn-Iv~l~~~~~~~~~~~lv~e~~~~g- 553 (746)
+..|+.-...++|++++++| .|=|.+....-.......-++++|.+++||| .++.++.+..+++.+++++++..|
T Consensus 241 ~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~r 320 (829)
T KOG0576|consen 241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGR 320 (829)
T ss_pred ccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCc
Confidence 33445556778999999998 3333332111111134566889999999999 888788787888999999999877
Q ss_pred ccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 554 QLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 554 ~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
+-. ...+...+...+.+.-.++++|+|+. .=+||| ||+..+ +..|..|||++..+....
T Consensus 321 s~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~------- 385 (829)
T KOG0576|consen 321 SSALEMTVSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM------- 385 (829)
T ss_pred cccccCChhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc-------
Confidence 221 22344455666777778899999987 568999 777655 788999999988764322
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccc
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQ 665 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~ 665 (746)
...+..+|+.|+|||+.....+... .|+||.|+
T Consensus 386 --~~~t~~~~~~~~~pev~~~~~~~~~---p~~~~~~~ 418 (829)
T KOG0576|consen 386 --KPRTAIGTPEPLAPEVIQENTIDGC---PDSGSLAV 418 (829)
T ss_pred --ccccCCCCCCCCCchhhcccccccC---CCccCCCc
Confidence 2334778999999999998888665 99999996
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.3e-08 Score=111.40 Aligned_cols=185 Identities=18% Similarity=0.164 Sum_probs=126.9
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..+.++..+.+-+|+++.++- .++|+..... ....+...++-.+.-..+||-+++...-+......++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 445666677777888888874 3444443221 1122333344334444456777765555555668899
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
+++|+.+|.+. ....+.+-.+.+...+..+.+|||.. .+.|||+||.|++...++..+++|||.........
T Consensus 882 ~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred hhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccccccc
Confidence 99999888775 22356667777788888999999998 89999999999999999999999998544322110
Q ss_pred CC-------------------C--Ccc--cccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PG-------------------T--TAE--TASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~-------------------~--~~~--~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. . ... .........||+.|.|||...+...... +|+|+.|++++
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~---ad~~~~g~~l~ 1026 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSA---ADWWSSGVCLF 1026 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCc---chhhhhhhhhh
Confidence 00 0 000 0122445789999999999999887665 99999999887
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.46 E-value=8.4e-07 Score=81.82 Aligned_cols=129 Identities=22% Similarity=0.186 Sum_probs=90.0
Q ss_pred CCCeEeecCCeeEEE-------EEeehh-hhh-------hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 484 PANKIREGGFNIVYN-------VAMKVA-NLK-------QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~-------vavK~~-~~~-------~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
....+-+|+-+.|++ +.||.- .+. .+-..++..+|++++.+++--.|.--.=++.+...-.+.||
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 567888999888886 345532 111 12235678899999999874444443445556666678899
Q ss_pred hccCC-ccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC---cEEEcccccccc
Q 041467 549 AISNG-QLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV---VTHVGDLGLAKF 615 (746)
Q Consensus 549 ~~~~g-~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~---~~ki~DfGla~~ 615 (746)
|+++- +++ ...........+++.|-+.+.-||.. +|+|+||..+||++..++ .+.++|||++..
T Consensus 91 ~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred eccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99763 222 11222233378899999999999999 999999999999996544 458999999854
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.35 E-value=6.3e-07 Score=98.40 Aligned_cols=94 Identities=14% Similarity=0.225 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc-cccccccccccccccccccccccc
Q 041467 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA-ETASSSIGINGTVGYVAPVIIAAR 649 (746)
Q Consensus 571 ~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~ 649 (746)
+++.|+.|+|... ++||++|.|++|.++..+..||+.|+.+....+.....-. -+.....-..-...|.|||++.+.
T Consensus 107 ~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 4458999999875 8999999999999999999999999987554331110000 000000011224679999999985
Q ss_pred ccccCCCccceeeccceeec
Q 041467 650 NLENREKRHTVMSFPQRFAL 669 (746)
Q Consensus 650 ~~~~~~~~~DiwSlG~i~~~ 669 (746)
..+. ++|++|+||..|+
T Consensus 185 ~~~~---~sd~fSlG~li~~ 201 (700)
T KOG2137|consen 185 TNTP---ASDVFSLGVLIYT 201 (700)
T ss_pred cccc---cccceeeeeEEEE
Confidence 5544 5999999998883
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.5e-09 Score=114.11 Aligned_cols=124 Identities=27% Similarity=0.377 Sum_probs=75.0
Q ss_pred CCCCEEeccCCCcc----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCC
Q 041467 110 KSLLLLSLAFNQFL----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKL 185 (746)
Q Consensus 110 ~~L~~L~Ls~N~l~----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L 185 (746)
..|...+.++|++. ++.-++.|+.|+|++|+++..- .+..|++|++|||++|.|..++.- ...+| +|
T Consensus 164 n~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l------~~~gc-~L 234 (1096)
T KOG1859|consen 164 NKLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQL------SMVGC-KL 234 (1096)
T ss_pred hhHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhcccccc------chhhh-hh
Confidence 35666677777773 3445677778888888777432 566777777777777777653211 01223 37
Q ss_pred CEEEcccccccccCChhhhhcccccceEEcccCcccccCC-ccccCCCCCCeeecccccce
Q 041467 186 ERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIP-HGIRNLVNLNWLTMESSQLI 245 (746)
Q Consensus 186 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p-~~~~~l~~L~~L~L~~N~l~ 245 (746)
..|.+++|.++. + ..+.++. +|+.||+++|-|.+--. ..+..|..|+.|+|.+|.+.
T Consensus 235 ~~L~lrnN~l~t-L-~gie~Lk-sL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 235 QLLNLRNNALTT-L-RGIENLK-SLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred eeeeecccHHHh-h-hhHHhhh-hhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 777777777652 2 3455665 57777777776653111 12344556666677666653
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.1e-06 Score=84.22 Aligned_cols=96 Identities=23% Similarity=0.211 Sum_probs=66.2
Q ss_pred HHHHHHHHHhhcCCCC--ceeeEEEEEecCCcccchhhhcc--CCccc---ccCCCHHHHHHHHHHHHHHHHHH-HhcCC
Q 041467 513 RSFAAEFNALRNIRHR--NLIKIITICSSIDFEGFDFKAIS--NGQLR---LCNLSLTQRVNIAIDVAFAIEYL-RHHCQ 584 (746)
Q Consensus 513 ~~~~~E~~~l~~l~Hp--nIv~l~~~~~~~~~~~lv~e~~~--~g~l~---~~~l~~~~~~~i~~~i~~~l~yL-H~~~~ 584 (746)
...++|++.|+++..- ++.+.+++ ....+||||+. +..+. ...++......++.+++..+..+ |..
T Consensus 53 ~~~~~E~~~L~~l~~~Gv~vP~p~~~----~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~-- 126 (188)
T PF01163_consen 53 EWAKKEFRNLKRLYEAGVPVPKPYDY----NRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKA-- 126 (188)
T ss_dssp HHHHHHHHHHHHCCCTT-SS--EEEE----ETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCT--
T ss_pred HHHHHHHHHHHHHHHCCccCCcEEEE----eCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhc--
Confidence 4578999999999865 56666654 24579999998 33332 22233566778888888866665 566
Q ss_pred CCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 585 ~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
+|||+|+.+.||+++++ .+.|+|||-|...
T Consensus 127 -givHGDLs~~NIlv~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 127 -GIVHGDLSEYNILVDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp -TEEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred -CceecCCChhhEEeecc-eEEEEecCcceec
Confidence 99999999999999877 9999999988653
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.3e-06 Score=87.24 Aligned_cols=99 Identities=15% Similarity=0.094 Sum_probs=74.6
Q ss_pred HHHHHHHHhhcCCCCc--eeeEEEEEec-----CCcccchhhhccCC-ccc-------ccCCCHHHHHHHHHHHHHHHHH
Q 041467 514 SFAAEFNALRNIRHRN--LIKIITICSS-----IDFEGFDFKAISNG-QLR-------LCNLSLTQRVNIAIDVAFAIEY 578 (746)
Q Consensus 514 ~~~~E~~~l~~l~Hpn--Iv~l~~~~~~-----~~~~~lv~e~~~~g-~l~-------~~~l~~~~~~~i~~~i~~~l~y 578 (746)
.+.+|.+.+.++..-+ +++.+++.+. ....++|+|++++- ++. ....+...+..++.+++..+.-
T Consensus 74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~ 153 (268)
T PRK15123 74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD 153 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 4789999888885333 2334445433 12467999999764 443 1234556778999999999999
Q ss_pred HHhcCCCCeEEcCCCCCCeeeCC-------CCcEEEcccccccc
Q 041467 579 LRHHCQPSIVHGDLKPSNILLDQ-------DVVTHVGDLGLAKF 615 (746)
Q Consensus 579 LH~~~~~~ivHrDlkp~NILl~~-------~~~~ki~DfGla~~ 615 (746)
||.. ||+|+|++++|||++. ++.+.++||+.++.
T Consensus 154 LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 154 MHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHC---cCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 9999 9999999999999975 46899999998864
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.6e-07 Score=107.75 Aligned_cols=72 Identities=14% Similarity=0.075 Sum_probs=53.2
Q ss_pred EEcCCCCC-CeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccce
Q 041467 588 VHGDLKPS-NILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQR 666 (746)
Q Consensus 588 vHrDlkp~-NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i 666 (746)
.|++.+|. |++++.+...++.|||.++....... .......+||+.|||||++.+..++. ++|||||||+
T Consensus 499 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~------~~~~~~~vGT~~Y~APE~l~~~~~~~---~~DiwSlG~i 569 (669)
T cd05610 499 PTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAA------PVEGERILGTPDYLAPELLLGKPHGP---AVDWWALGVC 569 (669)
T ss_pred CCCCCCCCCceeECCccccccccCCCchhhhcccc------cccCCceeeCccccCHHHcCCCCCCc---HHHHHHHHHH
Confidence 45566666 66677777889999999877532211 11223468999999999999877755 4999999999
Q ss_pred ee
Q 041467 667 FA 668 (746)
Q Consensus 667 ~~ 668 (746)
+|
T Consensus 570 l~ 571 (669)
T cd05610 570 LF 571 (669)
T ss_pred HH
Confidence 98
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.8e-06 Score=83.67 Aligned_cols=124 Identities=26% Similarity=0.223 Sum_probs=90.9
Q ss_pred CCCCeEeecCCeeEEE--------EEeehhhhh----------h------------hhhhHHHHHHHHHhhcCCCC--ce
Q 041467 483 SPANKIREGGFNIVYN--------VAMKVANLK----------Q------------KEASRSFAAEFNALRNIRHR--NL 530 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~--------vavK~~~~~----------~------------~~~~~~~~~E~~~l~~l~Hp--nI 530 (746)
...+.||.|.=+.||. +|||.-+.. . .......++|.++|+++.-. .|
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 3568999999999995 788853211 0 01123578999999999754 56
Q ss_pred eeEEEEEecCCcccchhhhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccc
Q 041467 531 IKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610 (746)
Q Consensus 531 v~l~~~~~~~~~~~lv~e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~Df 610 (746)
.+.+++ +...+|||++.+-.|...+++......++..|++-+.-+-.. ||||+|+.+=||+++++|.+.++||
T Consensus 174 P~P~~~----nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~dg~~~vIDw 246 (304)
T COG0478 174 PKPIAW----NRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTEDGDIVVIDW 246 (304)
T ss_pred CCcccc----ccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecCCCEEEEeC
Confidence 666553 456789999998777755545566666666666655555466 9999999999999999999999999
Q ss_pred ccc
Q 041467 611 GLA 613 (746)
Q Consensus 611 Gla 613 (746)
-=+
T Consensus 247 PQ~ 249 (304)
T COG0478 247 PQA 249 (304)
T ss_pred ccc
Confidence 544
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.12 E-value=6.4e-08 Score=105.36 Aligned_cols=119 Identities=25% Similarity=0.223 Sum_probs=72.0
Q ss_pred cccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEcc
Q 041467 19 FLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID 98 (746)
Q Consensus 19 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 98 (746)
.|...+.++|.+. .+..++.-++.|+.||||+|+++.. +.+..+++|++|||++|.+....--....+. |+.|.++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 4667788888886 6777788888888888888888743 3677788888888888887432222222222 5555555
Q ss_pred CCCCc--CcccCCCCCCEEeccCCCccccc------CCCCCcEeeCccCcc
Q 041467 99 CGGRI--DSLGHLKSLLLLSLAFNQFLSLS------NASSLEMIEFSRNQF 141 (746)
Q Consensus 99 ~~~~~--~~~~~l~~L~~L~Ls~N~l~~l~------~l~~L~~L~Ls~N~l 141 (746)
+|... ..+.+|++|+.|||++|-+..++ .+..|..|+|.+|.+
T Consensus 241 nN~l~tL~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 241 NNALTTLRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred ccHHHhhhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 44322 23445555555555555553322 234455555555543
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.11 E-value=4.4e-07 Score=89.15 Aligned_cols=188 Identities=20% Similarity=0.199 Sum_probs=115.6
Q ss_pred EEecccCcCccc-Cchhhh-CCccCcEEecccCcCCc--cCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 22 YINLVNNGFNGE-IPHQIG-RLISLERLILSNNSFSC--AIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 22 ~L~Ls~N~l~~~-~p~~~~-~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
.|-|.++.|... .-..|+ ..+.+++|||.+|+|+. .+-..+.+|+.|+.|+|+.|.+...+-..-..+.+|+.|-|
T Consensus 49 llvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVL 128 (418)
T KOG2982|consen 49 LLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVL 128 (418)
T ss_pred hheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEE
Confidence 455555555321 112232 35678888888888874 23334567888888888888886554332245668888888
Q ss_pred cCCCCc-----CcccCCCCCCEEeccCCCccc-----------------ccCCCCCcEeeCccCcccccCCccccCCCCC
Q 041467 98 DCGGRI-----DSLGHLKSLLLLSLAFNQFLS-----------------LSNASSLEMIEFSRNQFSGGVSVDFSRLKNL 155 (746)
Q Consensus 98 ~~~~~~-----~~~~~l~~L~~L~Ls~N~l~~-----------------l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 155 (746)
++.+.. ..+..++.++.|++|.|.+.. +..++.+..++++-|++...+ +++
T Consensus 129 NgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~F-------pnv 201 (418)
T KOG2982|consen 129 NGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIF-------PNV 201 (418)
T ss_pred cCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhc-------ccc
Confidence 776654 456788888899999885522 223445555556666665433 456
Q ss_pred CEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccC-ChhhhhcccccceEEcccCcccc
Q 041467 156 SWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVL-PHSIANLSSTIKQIAMGSNRISS 222 (746)
Q Consensus 156 ~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~~L~~L~l~~N~i~~ 222 (746)
..+-+..|.|...... +.+..++.+..|.|+.|+|..-- -+.+..++ .|..|.+++|.+..
T Consensus 202 ~sv~v~e~PlK~~s~e-----k~se~~p~~~~LnL~~~~idswasvD~Ln~f~-~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 202 NSVFVCEGPLKTESSE-----KGSEPFPSLSCLNLGANNIDSWASVDALNGFP-QLVDLRVSENPLSD 263 (418)
T ss_pred hheeeecCcccchhhc-----ccCCCCCcchhhhhcccccccHHHHHHHcCCc-hhheeeccCCcccc
Confidence 6666666666442221 23445566778888888875211 12344555 68888888887764
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.7e-07 Score=81.70 Aligned_cols=36 Identities=22% Similarity=0.378 Sum_probs=15.6
Q ss_pred CCCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 233 NLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 233 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
.++.|+|++|.+. .+|..+..++.|+.|+++.|.+.
T Consensus 78 t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~ 113 (177)
T KOG4579|consen 78 TATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN 113 (177)
T ss_pred hhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc
Confidence 3344444444443 33444444444444444444443
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.06 E-value=3.1e-07 Score=80.03 Aligned_cols=83 Identities=22% Similarity=0.356 Sum_probs=40.2
Q ss_pred CCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceee
Q 041467 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLN 262 (746)
Q Consensus 183 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 262 (746)
..|+..+|++|.+. .+|..|....+.++.|+|++|.|+ .+|..++.++.|+.|+++.|.+. ..|..+..+.+|-.|+
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 34444455555554 344444433334555555555555 35555555555555555555554 3344444444444444
Q ss_pred cccccc
Q 041467 263 IGGNHL 268 (746)
Q Consensus 263 Ls~N~l 268 (746)
..+|.+
T Consensus 130 s~~na~ 135 (177)
T KOG4579|consen 130 SPENAR 135 (177)
T ss_pred CCCCcc
Confidence 444443
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=98.04 E-value=4.5e-06 Score=59.10 Aligned_cols=37 Identities=38% Similarity=0.544 Sum_probs=24.8
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCC
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFS 55 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 55 (746)
++|++|+|++|+|+ .+|+.+++|++|++|+|++|+|+
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 35677777777776 56666777777777777777776
|
... |
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.8e-05 Score=77.64 Aligned_cols=128 Identities=19% Similarity=0.169 Sum_probs=83.8
Q ss_pred CCeEeecCCeeEEE-----EEeehhhhhhhhhhHHHHHHHHHhhcCCCCc--eeeEEEEEecCCcccchhhhccCCc-cc
Q 041467 485 ANKIREGGFNIVYN-----VAMKVANLKQKEASRSFAAEFNALRNIRHRN--LIKIITICSSIDFEGFDFKAISNGQ-LR 556 (746)
Q Consensus 485 ~~~ig~g~~g~v~~-----vavK~~~~~~~~~~~~~~~E~~~l~~l~Hpn--Iv~l~~~~~~~~~~~lv~e~~~~g~-l~ 556 (746)
.+.||+|..+.||+ +++|...... ......+|.++++.+..-. +.+.++++...+..+++||+++|.. ..
T Consensus 6 ~~~i~~G~t~~~y~~~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~ 83 (226)
T TIGR02172 6 WTQTGEGGNGESYTHKTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSFS 83 (226)
T ss_pred heeecCCCCcceeEecCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccchh
Confidence 36789999999998 4566654321 2345688999998886433 4667777777777788999998753 11
Q ss_pred -ccCCCHHHHHHHHHHHHHHHHHHHhc----------------------------------------CCCCeEEcCCCCC
Q 041467 557 -LCNLSLTQRVNIAIDVAFAIEYLRHH----------------------------------------CQPSIVHGDLKPS 595 (746)
Q Consensus 557 -~~~l~~~~~~~i~~~i~~~l~yLH~~----------------------------------------~~~~ivHrDlkp~ 595 (746)
....+......++.++++.+.-+|+. ..+.++|+|+.|.
T Consensus 84 ~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~ 163 (226)
T TIGR02172 84 RIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIG 163 (226)
T ss_pred hhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCC
Confidence 01112222333334444433333321 1235789999999
Q ss_pred CeeeCCCCcEEEcccccccc
Q 041467 596 NILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 596 NILl~~~~~~ki~DfGla~~ 615 (746)
||++++++ +.|+||+.+..
T Consensus 164 Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 164 NLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred cEEEcCCC-cEEEechhcCc
Confidence 99999888 99999998754
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 746 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 3e-17 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 6e-16 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-15 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 3e-10 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 2e-15 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 3e-10 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-11 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 4e-11 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 6e-11 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 1e-10 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 1e-10 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 2e-09 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 2e-07 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 3e-07 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 8e-07 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 8e-07 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 9e-07 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 2e-06 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 3e-06 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 4e-06 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-06 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-06 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 4e-06 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 5e-06 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 5e-06 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 5e-06 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 5e-06 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 6e-06 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 6e-06 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 6e-06 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 6e-06 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 6e-06 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 6e-06 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 7e-06 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 7e-06 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 7e-06 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 7e-06 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 7e-06 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 8e-06 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 8e-06 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 8e-06 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 8e-06 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 8e-06 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 8e-06 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 8e-06 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 8e-06 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 8e-06 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 9e-06 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 9e-06 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 9e-06 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 9e-06 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 9e-06 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 9e-06 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 9e-06 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 1e-05 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 1e-05 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 1e-05 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 1e-05 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 1e-05 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-05 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 1e-05 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 1e-05 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 2e-05 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 2e-05 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 2e-05 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 2e-05 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 3e-05 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 3e-05 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 3e-05 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 3e-05 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 3e-05 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 3e-05 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-05 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 3e-05 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 4e-05 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 4e-05 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 4e-05 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 4e-05 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 5e-05 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 5e-05 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 5e-05 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 5e-05 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 6e-05 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 6e-05 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 6e-05 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 7e-05 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 7e-05 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 7e-05 | ||
| 2qlu_A | 314 | Crystal Structure Of Activin Receptor Type Ii Kinas | 7e-05 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 8e-05 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 8e-05 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 8e-05 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 9e-05 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 9e-05 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 9e-05 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 9e-05 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 9e-05 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 9e-05 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 9e-05 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 1e-04 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 1e-04 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-04 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 1e-04 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 1e-04 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 1e-04 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 2e-04 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 2e-04 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 2e-04 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 2e-04 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-04 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 2e-04 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 2e-04 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 2e-04 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 2e-04 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 2e-04 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-04 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-04 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 3e-04 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-04 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 3e-04 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 3e-04 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 3e-04 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 3e-04 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 3e-04 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 3e-04 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 3e-04 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 3e-04 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 3e-04 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 3e-04 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 3e-04 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 3e-04 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 3e-04 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 3e-04 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 3e-04 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 4e-04 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 4e-04 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 4e-04 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 4e-04 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 4e-04 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 4e-04 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 4e-04 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 4e-04 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 4e-04 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 4e-04 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 4e-04 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 5e-04 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 5e-04 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 5e-04 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 5e-04 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 5e-04 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 5e-04 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 5e-04 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 5e-04 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 5e-04 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 5e-04 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 5e-04 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 5e-04 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 5e-04 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 5e-04 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 6e-04 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 6e-04 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 6e-04 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 6e-04 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 6e-04 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 7e-04 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 7e-04 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 7e-04 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 7e-04 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 7e-04 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 7e-04 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 7e-04 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 8e-04 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 8e-04 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 8e-04 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 8e-04 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 8e-04 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 218 bits (558), Expect = 5e-61
Identities = 114/460 (24%), Positives = 194/460 (42%), Gaps = 48/460 (10%)
Query: 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANL 62
S N + + L ++++ +N F+ IP +G +L+ L +S N S +
Sbjct: 186 SGNKISGDVDVSRC-VNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAI 243
Query: 63 SSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC---GGRIDS--LGHLKSLLLLSL 117
S+ + L L+ SN V I L+ L + G I G +L L L
Sbjct: 244 STCTELKLLNISSNQFVGPIPPLPLK--SLQYLSLAENKFTGEIPDFLSGACDTLTGLDL 301
Query: 118 AFNQF-----LSLSNASSLEMIEFSRNQFSGGVSVD-FSRLKNLSWLNLGVNNLGSGTAN 171
+ N F + S LE + S N FSG + +D +++ L L+L N SG
Sbjct: 302 SGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF-SGELP 360
Query: 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLS-STIKQIAMGSNRISSTIPHGIRN 230
E +L + L L + N F G + ++ +T++++ + +N + IP + N
Sbjct: 361 E----SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSN 416
Query: 231 LVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL---FN 287
L L + + L GTIP +G L+ L + N L+G I L + L FN
Sbjct: 417 CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFN 476
Query: 288 NLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVG 347
+L G IPS L+NC +L +S+S+N+LT +P+ I + L+ L+L NN +G++P E+G
Sbjct: 477 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA-ILKLSNNSFSGNIPAELG 535
Query: 348 NLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVP------TKGVFNNKTRFSIIGNGKL 401
+ ++L L+L+ N F +P + + N K
Sbjct: 536 DCRSL---------------IWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKN 580
Query: 402 CGGLDELHLPS--CRYKGSIKPSITSLKVLIPVIVSCLIL 439
G E H ++G + L P ++ +
Sbjct: 581 DGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVY 620
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 215 bits (550), Expect = 4e-60
Identities = 98/460 (21%), Positives = 172/460 (37%), Gaps = 56/460 (12%)
Query: 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIP--HQIGRLISLERLILSNNSFSCAIPA 60
SN+ + S L ++L N +G + +G L+ L +S+N+
Sbjct: 85 SNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKV 144
Query: 61 NLSSG-SNLIKLSTDSNNLVRDILTEICSLFKLERLRI----DCG--GRIDSLGHLKSLL 113
+ ++L L +N++ + L+ G + + +L
Sbjct: 145 SGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV-DVSRCVNLE 203
Query: 114 LLSLAFNQFL----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGT 169
L ++ N F L + S+L+ ++ S N+ SG S S L LN+ N G
Sbjct: 204 FLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF-VGP 262
Query: 170 ANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIR 229
L+ L N F G +P ++ T+ + + N +P
Sbjct: 263 IPP-------LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFG 315
Query: 230 NLVNLNWLTMESSQLIGTIPP-LIGETPNLQLLNIGGNHLQGSILSSLGNLTLQ-TYL-- 285
+ L L + S+ G +P + + L++L++ N G + SL NL+ L
Sbjct: 316 SCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDL 375
Query: 286 -FNNLQGNIPSSLANC--KSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSL 342
NN G I +L +L L + +N T +P + + + L L L N L+G++
Sbjct: 376 SSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELV-SLHLSFNYLSGTI 434
Query: 343 PPEVGNLKNLLRLH---------IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRF 393
P +G+L L L IP+ + E L L +N E+P
Sbjct: 435 PSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP----------- 483
Query: 394 SIIGNGKLCGGLDELHLPSCRYKGSIKPSI---TSLKVLI 430
S + N C L+ + L + R G I I +L +L
Sbjct: 484 SGLSN---CTNLNWISLSNNRLTGEIPKWIGRLENLAILK 520
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 210 bits (538), Expect = 2e-58
Identities = 103/410 (25%), Positives = 156/410 (38%), Gaps = 65/410 (15%)
Query: 16 LRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDS 75
+ L+ + L NNGF G+IP + L L LS N S IP++L S S L L
Sbjct: 392 PKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL 451
Query: 76 NNLVRDILTEICSLFKLERLRIDCGGRI-DSLGHLKSLLLLSLAFNQF-----LSLSNAS 129
N L G I L ++K+L L L FN LSN +
Sbjct: 452 NMLE---------------------GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT 490
Query: 130 SLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI-NLLTNCSKLERL 188
+L I S N+ +G + RL+NL+ L L N+ SG I L +C L L
Sbjct: 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF-SGN------IPAELGDCRSLIWL 543
Query: 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS--QLIG 246
N N F G +P ++ S + +N I+ I+N + + G
Sbjct: 544 DLNTNLFNGTIPAAMFKQSG-----KIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQG 598
Query: 247 TIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL---FNNLQGNIPSSLANCKSL 303
+ NI G + N +L +N L G IP + + L
Sbjct: 599 IRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYL 658
Query: 304 LGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPEN 363
L++ HN ++ ++P ++ + L+ L+L +N L+G +P + L L
Sbjct: 659 FILNLGHNDISGSIPDEVGDLRGLN-ILDLSSNKLDGRIPQAMSALTML----------- 706
Query: 364 LSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSC 413
++LS N +P G F + N LCG LP C
Sbjct: 707 ----TEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG----YPLPRC 748
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 198 bits (506), Expect = 5e-54
Identities = 109/433 (25%), Positives = 181/433 (41%), Gaps = 58/433 (13%)
Query: 28 NGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI--LTE 85
N + + L LE L LSN+ + ++ ++L L N+L + LT
Sbjct: 63 NVGFSAVSSSLLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLDLSRNSLSGPVTTLTS 121
Query: 86 ICSLFKLERLRI-----DCGGRIDSLGHLKSLLLLSLAFNQF--------LSLSNASSLE 132
+ S L+ L + D G++ L SL +L L+ N + L+
Sbjct: 122 LGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELK 181
Query: 133 MIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNR 192
+ S N+ SG VD SR NL +L++ NN S I L +CS L+ L +
Sbjct: 182 HLAISGNKISG--DVDVSRCVNLEFLDVSSNNF-STG------IPFLGDCSALQHLDISG 232
Query: 193 NGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP-L 251
N G +I+ + +K + + SN+ IP L +L +L++ ++ G IP L
Sbjct: 233 NKLSGDFSRAISTCTE-LKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFL 289
Query: 252 IGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL---FNNLQGNIP-SSLANCKSLLGLS 307
G L L++ GNH G++ G+ +L L NN G +P +L + L L
Sbjct: 290 SGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLD 349
Query: 308 VSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGN--LKNLLRLH--------- 356
+S N+ + LP+ + +++ L L+L +N +G + P + L L+
Sbjct: 350 LSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK 409
Query: 357 IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYK 416
IP N S L+LS+NY +P S +G+ L +L L +
Sbjct: 410 IPPTLSNCSELVSLHLSFNYLSGTIP-----------SSLGS---LSKLRDLKLWLNMLE 455
Query: 417 GSIKPSITSLKVL 429
G I + +K L
Sbjct: 456 GEIPQELMYVKTL 468
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 186 bits (475), Expect = 2e-53
Identities = 79/308 (25%), Positives = 120/308 (38%), Gaps = 30/308 (9%)
Query: 124 SLSNASSL----EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLL 179
L N ++L + + G + ++ ++ L+L NL +
Sbjct: 17 DLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNL-PKPYPIPSSL--- 72
Query: 180 TNCSKLERLYF-NRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLT 238
N L LY N G +P +IA L+ + + + +S IP + + L L
Sbjct: 73 ANLPYLNFLYIGGINNLVGPIPPAIAKLTQ-LHYLYITHTNVSGAIPDFLSQIKTLVTLD 131
Query: 239 MESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLT-LQTYLF---NNLQGNIP 294
+ L GT+PP I PNL + GN + G+I S G+ + L T + N L G IP
Sbjct: 132 FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP 191
Query: 295 SSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLR 354
+ AN +L + +S N L S + L N L L +VG KNL
Sbjct: 192 PTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQ-KIHLAKNSLAFDL-GKVGLSKNLNG 248
Query: 355 L---------HIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGL 405
L +P+ L F LN+S+N E+P G + N LCG
Sbjct: 249 LDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS- 307
Query: 406 DELHLPSC 413
LP+C
Sbjct: 308 ---PLPAC 312
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 3e-27
Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 51/260 (19%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
T L Y+ + + +G IP + ++ +L L S N+ S +P ++SS NL+ ++ D N
Sbjct: 101 TQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160
Query: 78 LVRDILTEICSLFKLERLRIDCGGRI-DSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEF 136
+ G I DS G L +++S
Sbjct: 161 IS---------------------GAIPDSYGSFSKLF-------TSMTISR--------- 183
Query: 137 SRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFE 196
N+ +G + F+ L NL++++L N L G A+ L + ++++ +N
Sbjct: 184 --NRLTGKIPPTFANL-NLAFVDLSRNML-EGDASV-----LFGSDKNTQKIHLAKNSLA 234
Query: 197 GVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETP 256
L + + + + + +NRI T+P G+ L L+ L + + L G IP G
Sbjct: 235 FDLG-KVGLSKN-LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQ 291
Query: 257 NLQLLNIGGN-HLQGSILSS 275
+ N L GS L +
Sbjct: 292 RFDVSAYANNKCLCGSPLPA 311
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 159 bits (403), Expect = 3e-41
Identities = 58/420 (13%), Positives = 128/420 (30%), Gaps = 64/420 (15%)
Query: 2 SSNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPAN 61
+S+ + K + I ++N + + RL L + + N+ F
Sbjct: 167 NSDPQQKSIKKSSRITLKDTQIGQLSNNI-TFVSKAVMRLTKLRQFYMGNSPFVAENICE 225
Query: 62 LSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI-DCG--GRI-DSLGHLKSLLLLSL 117
N + + + +L L + + +C ++ L L + L+++
Sbjct: 226 AWENENS-----EYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINV 280
Query: 118 AFNQFL-------------SLSNASSLEMIEFSRNQFSGG-VSVDFSRLKNLSWLNLGVN 163
A N+ + +++I N V ++K L L N
Sbjct: 281 ACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYN 340
Query: 164 NLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISST 223
L + + KL L N +P + + ++ ++ N++
Sbjct: 341 QLEG-------KLPAFGSEIKLASLNLAYNQITE-IPANFCGFTEQVENLSFAHNKLKY- 391
Query: 224 IP--HGIRNLVNLNWLTMESSQL-------IGTIPPLIGETPNLQLLNIGGNHLQGSILS 274
IP +++ ++ + +++ + P + N+ +N+ N +
Sbjct: 392 IPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKE 451
Query: 275 SLGNLT-LQ---------TYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSV 324
+ L T + N + + N L + + NKLT L +
Sbjct: 452 LFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRAT 510
Query: 325 TTLSL-YLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPT 383
T L ++L N + P + N L + + N E P
Sbjct: 511 TLPYLVGIDLSYNSFSK-FPTQPLNSSTL---------KGFGIRNQRDAQGNRTLREWPE 560
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 8e-39
Identities = 54/373 (14%), Positives = 116/373 (31%), Gaps = 42/373 (11%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSF--------SCAIPANLSSGSNLIKL 71
L + + N ++P + L ++ + ++ N A+ G + +
Sbjct: 251 LTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQII 310
Query: 72 STDSNNLVR-DILTEICSLFKLERLRIDC---GGRIDSLGHLKSLLLLSLAFNQFLSL-- 125
NNL + T + + KL L G++ + G L L+LA+NQ +
Sbjct: 311 YIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQITEIPA 370
Query: 126 ---SNASSLEMIEFSRNQFSGGV-SVDFSRLKNLSWLNLGVNNLGSGTANELDFI-NLLT 180
+E + F+ N+ D + +S ++ N +GS D +
Sbjct: 371 NFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPF 430
Query: 181 NCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISS-------TIPHGIRNLVN 233
+ + + N + S + I + N ++ +N
Sbjct: 431 KGINVSSINLSNNQISKFPKELFSTGSP-LSSINLMGNMLTEIPKNSLKDENENFKNTYL 489
Query: 234 LNWLTMESSQLIGTIPPL-IGETPNLQLLNIGGNHLQG-----SILSSLGNLTLQTYL-- 285
L + + ++L P L +++ N S+L ++
Sbjct: 490 LTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDA 549
Query: 286 -FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSL-YLELDNNLLNGSLP 343
N P + C SL L + N + + ++I ++ L++ +N
Sbjct: 550 QGNRTLREWPEGITLCPSLTQLQIGSNDIRK-VNEKITP----NISVLDIKDNPNISIDL 604
Query: 344 PEVGNLKNLLRLH 356
V
Sbjct: 605 SYVCPYIEAGMYM 617
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 2e-34
Identities = 65/431 (15%), Positives = 137/431 (31%), Gaps = 69/431 (16%)
Query: 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSC----AIPANLSSGSNLIKLS 72
+ ++L G +G +P IG+L LE L L ++ P +S+ + +
Sbjct: 80 NGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQ 139
Query: 73 TDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLE 132
+ + + L DC +K ++L Q LSN +
Sbjct: 140 KMRMHYQKTFVDYDPRE-DFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNIT-- 196
Query: 133 MIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNR 192
VS RL L +G + + E +
Sbjct: 197 -----------FVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQY------- 238
Query: 193 NGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWL--------TMESSQL 244
NL + + + + + +P ++ L + + + E +
Sbjct: 239 ----KTEDLKWDNLKD-LTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKD 293
Query: 245 IGTIPPLIGETPNLQLLNIGGNHLQ-GSILSSLGNLT-LQT-YL-FNNLQGNIPSSLANC 300
+Q++ IG N+L+ + +SL + L +N L+G +P + +
Sbjct: 294 DWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSE 352
Query: 301 KSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPP--EVGNLKNLLRLHIP 358
L L++++N++T +P T L +N L +P + ++ +
Sbjct: 353 IKLASLNLAYNQITE-IPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVM------ 404
Query: 359 EYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYKGS 418
++ SYN GS + K + + ++L + +
Sbjct: 405 ---------SAIDFSYNEIGS-------VDGKNFDPLDPTPFKGINVSSINLSNNQISKF 448
Query: 419 IKPSITSLKVL 429
K ++ L
Sbjct: 449 PKELFSTGSPL 459
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 8e-28
Identities = 33/279 (11%), Positives = 80/279 (28%), Gaps = 25/279 (8%)
Query: 124 SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCS 183
SL++ + + SG V +L L L LG + ++
Sbjct: 76 SLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFG--PKGISANM 133
Query: 184 KLERLYFNRNGFEGVLPHSIANLS-STIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS 242
E+ R ++ S + + + S+ +I R + + S+
Sbjct: 134 SDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSN 193
Query: 243 QLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKS 302
+ + + L+ +G + + Y N K
Sbjct: 194 NI-TFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEY--AQQYKTEDLKWDNLKD 250
Query: 303 LLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLL--------NGSLPPEVGNLKNLLR 354
L + V + + LP + ++ + + + N + + + +
Sbjct: 251 LTDVEVYNCPNLTKLPTFLKALPEMQ-LINVACNRGISGEQLKDDWQALADAPVGEKIQI 309
Query: 355 L-----HIPEYPENLSFFEL-----LNLSYNYFGSEVPT 383
+ ++ +P S ++ L YN ++P
Sbjct: 310 IYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPA 348
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 5e-13
Identities = 21/216 (9%), Positives = 60/216 (27%), Gaps = 32/216 (14%)
Query: 230 NLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG----SILSSLGNLTLQTYL 285
+ + L++E G +P IG+ L++L +G + + +
Sbjct: 79 SNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQK 138
Query: 286 ---FNNLQGNIPSSLA--NCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNG 340
+ Q + L+ ++ + ++ + + +N +
Sbjct: 139 QKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD-TQIGQLSNNI-T 196
Query: 341 SLPPEVGNLKNLLRLHI----PEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSII 396
+ V L L + ++ +E N Y
Sbjct: 197 FVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTED-----------LKW 245
Query: 397 GNGKLCGGLDELHLPSCRYKGSIKPSI---TSLKVL 429
N L ++ + +C + + ++++
Sbjct: 246 DN---LKDLTDVEVYNCPNLTKLPTFLKALPEMQLI 278
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 3e-37
Identities = 78/455 (17%), Positives = 151/455 (33%), Gaps = 59/455 (12%)
Query: 3 SNNLLQYSKPLCILR-TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPAN 61
++N L+ R + L +++ N + P +L L+ L L +N S
Sbjct: 33 THNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKT 92
Query: 62 LSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID----CGGRIDSLGHLKSLLLLSL 117
+ +NL +L SN++ + L L + ++ + L++L L L
Sbjct: 93 FAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLL 152
Query: 118 AFNQF-------LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTA 170
+ N+ L + SSL+ +E S NQ F + L L L L +
Sbjct: 153 SNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL-GPSL 211
Query: 171 NELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSST-IKQIAMGSNRISSTIPHGIR 229
E + L + + L + + + L T + + + N ++
Sbjct: 212 TEKLCLEL--ANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFA 269
Query: 230 NLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGN---------HLQGSILSSLGNLT 280
L L + +E + + + N++ LN+ + L S L
Sbjct: 270 WLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLK 329
Query: 281 LQTYL---FNNLQGNIPSSLANCKSLLGLSVSHNKLT-STLPQQILSVTTLSL--YLELD 334
+L N++ G + +L LS+S++ + TL + S L L
Sbjct: 330 CLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLT 389
Query: 335 NNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFS 394
N ++ L +L E+L+L N G E+ +
Sbjct: 390 KNKISKIESDAFSWLGHL---------------EVLDLGLNEIGQELT-GQEWRG----- 428
Query: 395 IIGNGKLCGGLDELHLPSCRYKGSIKPSITSLKVL 429
+ E++L +Y + S + L
Sbjct: 429 -------LENIFEIYLSYNKYLQLTRNSFALVPSL 456
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 1e-35
Identities = 81/431 (18%), Positives = 137/431 (31%), Gaps = 49/431 (11%)
Query: 3 SNNLLQYSKP----LCILRTFLRYINLVNNGFNGEIPHQIG--RLISLERLILSNNSFSC 56
+N L S L + T +R ++L N+ + + +L L LS N+ +
Sbjct: 203 NNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262
Query: 57 AIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLS 116
+ + L + NN+ + LF + L + +S S
Sbjct: 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLK-----------RSFTKQS 311
Query: 117 LAFNQF-----LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171
++ S LE + N G S F+ L NL +L+L + T
Sbjct: 312 ISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLT 371
Query: 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHG-IRN 230
F++L S L L +N + + + L ++ + +G N I + R
Sbjct: 372 NETFVSL--AHSPLHILNLTKNKISKIESDAFSWLGH-LEVLDLGLNEIGQELTGQEWRG 428
Query: 231 LVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG--SILSSLGNLTLQTYL--- 285
L N+ + + ++ + P+LQ L + L+ S S L T L
Sbjct: 429 LENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLS 488
Query: 286 FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSL-------YLELDNNLL 338
NN+ L + L L + HN L L L L++N
Sbjct: 489 NNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGF 548
Query: 339 NGSLPPEVGNLKNLLRLH---------IPEYPENLSFFELLNLSYNYFGSEVPT--KGVF 387
+ +L L + N + LNL N S F
Sbjct: 549 DEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAF 608
Query: 388 NNKTRFSIIGN 398
N T + N
Sbjct: 609 RNLTELDMRFN 619
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 1e-30
Identities = 68/384 (17%), Positives = 131/384 (34%), Gaps = 46/384 (11%)
Query: 42 ISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC-- 99
+S E S+ + +P +L +N+ L+ N L R +L L +
Sbjct: 4 VSHEVADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNT 60
Query: 100 --GGRIDSLGHLKSLLLLSLAFNQFLSL-----SNASSLEMIEFSRNQFSGGVSVDFSRL 152
+ L L +L+L N+ L + ++L + N + F +
Sbjct: 61 ISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQ 120
Query: 153 KNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLS-STIK 211
KNL L+L N L S L+ L + N + + + + S++K
Sbjct: 121 KNLITLDLSHNGLSSTKL------GTQVQLENLQELLLSNNKIQALKSEELDIFANSSLK 174
Query: 212 QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE---TPNLQLLNIGGNHL 268
++ + SN+I P + L L + + QL ++ + +++ L++ + L
Sbjct: 175 KLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQL 234
Query: 269 QGSILSSLGNLTLQ--TYL---FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILS 323
+ ++ L T L +NNL S A L + +N + +
Sbjct: 235 STTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHG 294
Query: 324 VTTLSLYLELDNNLLNGSL---------PPEVGNLKNLLRLH---------IPEYPENLS 365
+ + YL L + S+ LK L L+ L
Sbjct: 295 LFNVR-YLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLI 353
Query: 366 FFELLNLSYNYFGSEVPTKGVFNN 389
+ L+LS ++ T F +
Sbjct: 354 NLKYLSLSNSFTSLRTLTNETFVS 377
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 3e-30
Identities = 69/398 (17%), Positives = 124/398 (31%), Gaps = 47/398 (11%)
Query: 3 SNNLLQYSKPLCILR-TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPAN 61
S N L L Y L N H + L ++ L L + +I
Sbjct: 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLA 315
Query: 62 ---------LSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID---------CGGRI 103
L L+ + N++ L L+ L +
Sbjct: 316 SLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETF 375
Query: 104 DSLGHLKSLLLLSLAFNQFLSL-----SNASSLEMIEFSRNQFSGGVSVD-FSRLKNLSW 157
SL H L +L+L N+ + S LE+++ N+ ++ + L+N+
Sbjct: 376 VSLAH-SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFE 434
Query: 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGV--LPHSIANLSSTIKQIAM 215
+ L N N L+RL R + V P L + + + +
Sbjct: 435 IYLSYNKY------LQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRN-LTILDL 487
Query: 216 GSNRISSTIPHGIRNLVNLNWLTMESSQL--------IGTIPPLIGETPNLQLLNIGGNH 267
+N I++ + L L L ++ + L G + +L +LN+ N
Sbjct: 488 SNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNG 547
Query: 268 LQGSILSSLGNLTLQTYLF---NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSV 324
+ +L + NNL S N SL L++ N +TS +
Sbjct: 548 FDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPA 607
Query: 325 TTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPE 362
L++ N + + + N + PE
Sbjct: 608 FRNLTELDMRFNPFDCT-CESIAWFVNWINETHTNIPE 644
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 6e-22
Identities = 62/324 (19%), Positives = 110/324 (33%), Gaps = 35/324 (10%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFS-CAIPANLSSGSNLIKLST---DS 75
L ++N+ +N G + LI+L+ L LSN+ S + L
Sbjct: 331 LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTK 390
Query: 76 NNLVRDILTEICSLFKLERL-----RIDCGGRIDSLGHLKSLLLLSLAFNQFL-----SL 125
N + + L LE L I L+++ + L++N++L S
Sbjct: 391 NKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSF 450
Query: 126 SNASSLEMIEFSRNQFSGGVSVD--FSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCS 183
+ SL+ + R S F L+NL+ L+L NN+ + + +L
Sbjct: 451 ALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDD------MLEGLE 504
Query: 184 KLERLYFNRN--------GFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLN 235
KLE L N G + + LS + + + SN ++L L
Sbjct: 505 KLEILDLQHNNLARLWKHANPGGPIYFLKGLSH-LHILNLESNGFDEIPVEVFKDLFELK 563
Query: 236 WLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLG-NLTLQTYL---FNNLQG 291
+ + + L + +L+ LN+ N + G T L FN
Sbjct: 564 IIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDC 623
Query: 292 NIPSSLANCKSLLGLSVSHNKLTS 315
S + + +L+S
Sbjct: 624 TCESIAWFVNWINETHTNIPELSS 647
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 6e-36
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 41/199 (20%)
Query: 471 SHAELSKATNNFSPANKIREGGFNIVY--------NVAMKVANLKQKEAS---RSFAAEF 519
S EL A++NFS N + GGF VY VA+K LK++ F E
Sbjct: 21 SLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKR--LKEERTQGGELQFQTEV 78
Query: 520 NALRNIRHRNLIKIITICSSIDFEG------FDFKAISNGQL--RL-------CNLSLTQ 564
+ HRNL+++ C + + ++NG + L L +
Sbjct: 79 EMISMAVHRNLLRLRGFCM----TPTERLLVYPY--MANGSVASCLRERPESQPPLDWPK 132
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624
R IA+ A + YL HC P I+H D+K +NILLD++ VGD GLAK + + T
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD--TH 190
Query: 625 AETASSSIGINGTVGYVAP 643
TA + GT+G++AP
Sbjct: 191 VTTA-----VRGTIGHIAP 204
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 2e-34
Identities = 56/411 (13%), Positives = 120/411 (29%), Gaps = 67/411 (16%)
Query: 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANL 62
+N+ Y + N L L + L N +P L
Sbjct: 456 ANSPFTYD----NIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFL 511
Query: 63 SSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQF 122
L L+ N +L D + + + +N
Sbjct: 512 YDLPELQSLNIACNRG-ISAAQLKADWTRL----------ADDEDTGPKIQIFYMGYNNL 560
Query: 123 ------LSLSNASSLEMIEFSRNQFSGGVSVD-FSRLKNLSWLNLGVNNLGSGTANELDF 175
SL L +++ N+ ++ F L+ L L N +
Sbjct: 561 EEFPASASLQKMVKLGLLDCVHNKVR---HLEAFGTNVKLTDLKLDYNQIEEIPE----- 612
Query: 176 INLLTNCSKLERLYFNRNGFEGVLPH-SIANLSSTIKQIAMGSNRISSTIPH-----GIR 229
+ ++E L F+ N + + + ++ + + N+I S +
Sbjct: 613 -DFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYV-MGSVDFSYNKIGSEGRNISCSMDDY 670
Query: 230 NLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ-------GSILSSLGNLTLQ 282
+N + +T+ +++ L + + + N + + N L
Sbjct: 671 KGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLL 730
Query: 283 TYL---FNNLQGNIPSSLA--NCKSLLGLSVSHNKLTSTLPQQILSVTTL-----SLYLE 332
T + FN L + L + VS+N +S P Q L+ + L +
Sbjct: 731 TTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRD 788
Query: 333 LDNNLLNGSLPPEVGNLKNLLRL--------HIPEYPENLSFFELLNLSYN 375
+ N + P + +L++L + + +L+++ N
Sbjct: 789 AEGNRILRQWPTGITTCPSLIQLQIGSNDIRKVD--EKLTPQLYILDIADN 837
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 2e-30
Identities = 53/433 (12%), Positives = 121/433 (27%), Gaps = 58/433 (13%)
Query: 3 SNNLLQYSKPLCILR-TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPAN 61
+ + P I + T L+ ++ + ++ + +
Sbjct: 331 AGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKM 390
Query: 62 LSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI------DCGGRI----DSLGHLKS 111
+ LS + + E+ + K R+ + + RI ++ L
Sbjct: 391 FLDYDQRLNLSDLLQDAINRNP-EMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTK 449
Query: 112 LLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171
L ++ A + F + A E + + +S LK+L+ + L + +
Sbjct: 450 LQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPD 509
Query: 172 ELDFINLLTNCSKLERLYFNRNGFEGV---------LPHSIANLSSTIKQIAMGSNRISS 222
L + +L+ L N L I+ MG N +
Sbjct: 510 F------LYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPK-IQIFYMGYNNLEE 562
Query: 223 -TIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLT- 280
++ +V L L +++ G L L + N ++ I T
Sbjct: 563 FPASASLQKMVKLGLLDCVHNKV--RHLEAFGTNVKLTDLKLDYNQIE-EIPEDFCAFTD 619
Query: 281 -LQT-YLFNNLQGNIPS--SLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSL----YLE 332
++ +N IP+ + + + + S+NK+ S S+ +
Sbjct: 620 QVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVT 679
Query: 333 LDNNLLNGSLPPEVGNLKNLLRLH----------------IPEYPENLSFFELLNLSYNY 376
L N + + + +N ++L +N
Sbjct: 680 LSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNK 739
Query: 377 FGSEVPTKGVFNN 389
+ +
Sbjct: 740 L-TSLSDDFRATT 751
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 2e-30
Identities = 57/376 (15%), Positives = 113/376 (30%), Gaps = 64/376 (17%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFS---------CAIPANLSSGSNLIK 70
L + L N ++P + L L+ L ++ N + + +G +
Sbjct: 493 LTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQI 552
Query: 71 LSTDSNNLVR-DILTEICSLFKLERLRIDCGG----RIDSLGHLKSLLLLSLAFNQFLSL 125
NNL + + KL L DC +++ G L L L +NQ +
Sbjct: 553 FYMGYNNLEEFPASASLQKMVKLGLL--DCVHNKVRHLEAFGTNVKLTDLKLDYNQIEEI 610
Query: 126 -----SNASSLEMIEFSRNQFSG-GVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLL 179
+ +E + FS N+ + + + ++ N +GS N ++
Sbjct: 611 PEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDY 670
Query: 180 TNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISS-------TIPHGIRNLV 232
+ + N + A S I I + +N ++S +N
Sbjct: 671 -KGINASTVTLSYNEIQKFPTELFATGSP-ISTIILSNNLMTSIPENSLKPKDGNYKNTY 728
Query: 233 NLNWLTMESSQLIGTIPPLIGET--PNLQLLNIGGNHLQG-----SILSSLGNLTLQTYL 285
L + + ++L ++ T P L +++ N S L ++
Sbjct: 729 LLTTIDLRFNKL-TSLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQR 787
Query: 286 F---NNLQGNIPSSLANCKSLLGLSVS---------------------HNKLTS-TLPQQ 320
N + P+ + C SL+ L + N S +
Sbjct: 788 DAEGNRILRQWPTGITTCPSLIQLQIGSNDIRKVDEKLTPQLYILDIADNPNISIDVTSV 847
Query: 321 ILSVTTLSLYLELDNN 336
+ L D
Sbjct: 848 CPYIEAGMYVLLYDKT 863
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 1e-27
Identities = 66/435 (15%), Positives = 127/435 (29%), Gaps = 85/435 (19%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
+ ++L G G +P IG+L L+ L +S + +S + + +
Sbjct: 325 VTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETV-SGRLFGDEELTPDMSEERKHRI 383
Query: 80 RDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRN 139
R + L + + L L L +
Sbjct: 384 RMHYKK------------------MFLDYDQRLNLSDLLQDAINRNPE------------ 413
Query: 140 QFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI-NLLTNCSKLERLYFNRNGFEGV 198
+K S ++L +G+ T N + FI + +KL+ +YF + F
Sbjct: 414 ---------MKPIKKDSRISLKDTQIGNLT-NRITFISKAIQRLTKLQIIYFANSPFTYD 463
Query: 199 LPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNL 258
++ + NL +L + + + + +P + + P L
Sbjct: 464 NIAVDWEDAN------SDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPEL 517
Query: 259 QLLNIGGNHLQG---------SILSSLGNLTLQTYL---FNNLQG-NIPSSLANCKSLLG 305
Q LNI N + +NNL+ +SL L
Sbjct: 518 QSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGL 577
Query: 306 LSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVG-NLKNLLRLH-------- 356
L HNK+ + + L+ L+LD N + +P + + L
Sbjct: 578 LDCVHNKVRH--LEAFGTNVKLT-DLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKY 633
Query: 357 IPEYPE--NLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCR 414
IP ++ ++ SYN GSE + + + L
Sbjct: 634 IPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGI---------NASTVTLSYNE 684
Query: 415 YKGSIKPSITSLKVL 429
+ + +
Sbjct: 685 IQKFPTELFATGSPI 699
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 7e-22
Identities = 38/273 (13%), Positives = 80/273 (29%), Gaps = 28/273 (10%)
Query: 124 SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNL-GSGTANELDFINLLTNC 182
L N + + + G V +L L L+ G ++ SG + + +
Sbjct: 318 DLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSE 377
Query: 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTME-S 241
+ R+ + + I NR P + ++L +
Sbjct: 378 ERKHRIRMHYKKMFLDYDQRLNLSDLLQDAI----NRNPEMKPIKKDSRISLKDTQIGNL 433
Query: 242 SQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCK 301
+ I I I LQ++ + ++ Y N S +N K
Sbjct: 434 TNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDY--AKQYENEELSWSNLK 491
Query: 302 SLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNG---------SLPPEVGNLKNL 352
L + + + + LP + + L L + N L + +
Sbjct: 492 DLTDVELYNCPNMTQLPDFLYDLPELQ-SLNIACNRGISAAQLKADWTRLADDEDTGPKI 550
Query: 353 LRL-----HIPEYPENLSFFEL-----LNLSYN 375
++ E+P + S ++ L+ +N
Sbjct: 551 QIFYMGYNNLEEFPASASLQKMVKLGLLDCVHN 583
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 98.4 bits (245), Expect = 2e-21
Identities = 50/312 (16%), Positives = 88/312 (28%), Gaps = 39/312 (12%)
Query: 105 SLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLN 159
L + + LSLA ++ + L+++ F + + +
Sbjct: 318 DLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSE 377
Query: 160 LGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNR 219
+ + + N S L + NRN + +S QI +NR
Sbjct: 378 ERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS-RISLKDTQIGNLTNR 436
Query: 220 ISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNL 279
I+ I I+ L L + +S + E N N S NL
Sbjct: 437 ITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN-----EELSWSNL 490
Query: 280 TLQTYLF---NNLQGNIPSSLANCKSLLGLSVSHNKLTS---------TLPQQILSVTTL 327
T + +P L + L L+++ N+ S L + +
Sbjct: 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKI 550
Query: 328 SLYLELDNNLLNGSLPPEV--GNLKNLLRL--------HIPEYPENLSFFELLNLSYNYF 377
+ N L P + L L H+ + L L YN
Sbjct: 551 Q-IFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRHLEAF-GTNVKLTDLKLDYNQI 607
Query: 378 GSEVPTKGVFNN 389
E+P +
Sbjct: 608 -EEIP-EDFCAF 617
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 68.0 bits (166), Expect = 7e-12
Identities = 27/234 (11%), Positives = 60/234 (25%), Gaps = 47/234 (20%)
Query: 197 GVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETP 256
G P + + + +++ +P I L L L+ + + E
Sbjct: 312 GDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEEL 371
Query: 257 NLQLLNIGGNHLQGSI-------LSSLGNLTL-------------------------QTY 284
+ + ++ L L Q
Sbjct: 372 TPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIG 431
Query: 285 LFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPP 344
N I ++ L + +++ T ++ D +
Sbjct: 432 NLTNRITFISKAIQRLTKLQIIYFANSPFTY------DNIAVDWEDANSDYAKQYENEEL 485
Query: 345 EVGNLKNLLRLH---------IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNN 389
NLK+L + +P++ +L + LN++ N S K +
Sbjct: 486 SWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTR 539
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 62.2 bits (151), Expect = 4e-10
Identities = 31/225 (13%), Positives = 65/225 (28%), Gaps = 29/225 (12%)
Query: 218 NRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLG 277
+ + N + L++ G +P IG+ L++L+ G + S G
Sbjct: 309 DMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSG-RLFG 367
Query: 278 NLTLQTYLFNNLQGNIPSS-----LANCKSLLGLSVSHNKLTS---TLPQQILSVTTLS- 328
+ L + + I L + L + + + P + S +L
Sbjct: 368 DEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKD 427
Query: 329 LYLELDNNLLNGSLPPEVGNLKNLLRLHIP----EYPENLSFFELLNLSYNYFGSEVPTK 384
+ N + + + L L ++ Y +E N Y
Sbjct: 428 TQIGNLTNRI-TFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEE-- 484
Query: 385 GVFNNKTRFSIIGNGKLCGGLDELHLPSCRYKGSIKPSITSLKVL 429
++N L ++ L +C + + L L
Sbjct: 485 LSWSNLKD------------LTDVELYNCPNMTQLPDFLYDLPEL 517
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 2e-33
Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 470 ISHAELSKATNNFSPANKIREGGFNIVY--------NVAMKVANLKQKEASRSFAAEFNA 521
+ +L +ATNNF I G F VY VA+K + + F E
Sbjct: 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET 88
Query: 522 LRNIRHRNLIKIITICSSIDFEG------FDFKAISNGQLR---------LCNLSLTQRV 566
L RH +L+ +I C E + + + NG L+ ++S QR+
Sbjct: 89 LSFCRHPHLVSLIGFCD----ERNEMILIYKY--MENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 567 NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626
I I A + YL H +I+H D+K NILLD++ V + D G++K GT +
Sbjct: 143 EICIGAARGLHYL--H-TRAIIHRDVKSINILLDENFVPKITDFGISKK------GTELD 193
Query: 627 TASSSIGINGTVGYVAP 643
S + GT+GY+ P
Sbjct: 194 QTHLSTVVKGTLGYIDP 210
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 1e-32
Identities = 71/412 (17%), Positives = 131/412 (31%), Gaps = 40/412 (9%)
Query: 3 SNNLLQYSKPLCILR-TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSF-SCAIPA 60
+ N +Q + L+ + V IG L +L+ L +++N S +P
Sbjct: 84 TGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 143
Query: 61 NLSSGSNLIKLSTDSNNLVRDILTEICSLFKLE--RLRIDCG-----GRIDSLGHLKSLL 113
S+ +NL L SN + T++ L ++ L +D L
Sbjct: 144 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLH 203
Query: 114 LLSLAFNQF------LSLSNASSLEMIEFSRNQFSGG---VSVDFSRLKNLSWLNLGVNN 164
L+L N + + LE+ +F D S L+ L L +
Sbjct: 204 KLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFR 263
Query: 165 LGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTI 224
L D I+L + + E V S + + + + + +
Sbjct: 264 LAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFS---YNFGWQHLELVNCKFGQFP 320
Query: 225 PHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ--GSILSSLGNLT-L 281
+++L L + + G + P+L+ L++ N L G S T L
Sbjct: 321 TLKLKSLKRLTF-----TSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSL 375
Query: 282 QT-YLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNG 340
+ L N + S+ + L L H+ L + +YL++ +
Sbjct: 376 KYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 435
Query: 341 SLPPEVGNLKNLLRLHI----------PEYPENLSFFELLNLSYNYFGSEVP 382
+ L +L L + P+ L L+LS P
Sbjct: 436 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 487
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 7e-31
Identities = 75/410 (18%), Positives = 127/410 (30%), Gaps = 59/410 (14%)
Query: 3 SNNLLQYSKP-----LCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCA 57
S+N +Q L + ++L N N I + I L +L L NN S
Sbjct: 157 SSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLN 215
Query: 58 IPAN--------------LSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRI 103
+ L N L + + + F+L L I
Sbjct: 216 VMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDII 275
Query: 104 DSLGHLKSLLLLSLAFNQF---LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNL 160
D L ++ SL S + +E +F ++ LK L++ +
Sbjct: 276 DLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSN 335
Query: 161 GVNNLGSGTANELDFINLLTNCSKLERLY--FNRNGFEGVLPHSIANLSSTIKQIAMGSN 218
N S + LE L N F+G S +S +K + + N
Sbjct: 336 KGGNAFS-----------EVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTS-LKYLDLSFN 383
Query: 219 RISSTIPHGIRNLVNLNWLTMESSQLIGTIPP-LIGETPNLQLLNIGGNHLQGSILSSLG 277
+ T+ L L L + S L + NL L+I H + +
Sbjct: 384 GVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 442
Query: 278 NLTLQTYLF---NNLQGNI-PSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLEL 333
L+ L N+ Q N P ++L L +S +L P S+++L L +
Sbjct: 443 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ-VLNM 501
Query: 334 DNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPT 383
+N L +L ++L+ S N+ +
Sbjct: 502 SHNNFFSLDTFPYKCLNSL---------------QVLDYSLNHIMTSKKQ 536
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 2e-30
Identities = 57/352 (16%), Positives = 105/352 (29%), Gaps = 38/352 (10%)
Query: 1 NSSNNLLQYSKPLCILRTFLRYINL---VNNGFNGEIPHQIGRLISLERLILSNNSFSCA 57
+ NL ++ K L + + +I L ++ L + +
Sbjct: 238 RNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERV 297
Query: 58 IPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSL 117
S L + + +L L LK L S
Sbjct: 298 KD--FSYNFGWQHLELVNCKF-----GQFPTLK---------------LKSLKRLTFTSN 335
Query: 118 AFNQFLSLSNASSLEMIEFSRNQ--FSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDF 175
S + SLE ++ SRN F G S +L +L+L N + +
Sbjct: 336 KGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-------M 388
Query: 176 INLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLN 235
+ +LE L F + + + S+ + + + L +L
Sbjct: 389 SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLE 448
Query: 236 WLTMESSQLIGTIPP-LIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLF---NNLQG 291
L M + P + E NL L++ L+ ++ +L+ L NN
Sbjct: 449 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 508
Query: 292 NIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLP 343
SL L S N + ++ Q++ + +L L N +
Sbjct: 509 LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 560
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 5e-28
Identities = 77/436 (17%), Positives = 130/436 (29%), Gaps = 65/436 (14%)
Query: 3 SNNLLQYSKPLCILR-TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPAN 61
S N L++ L+ ++L L L LIL+ N
Sbjct: 36 SFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGA 95
Query: 62 LSSGSNLIKLSTDSNNLVRDILTEICSLFKLERL-----RIDCGGRIDSLGHLKSLLLLS 116
S S+L KL NL I L L+ L I + +L +L L
Sbjct: 96 FSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD 155
Query: 117 LAFNQF-----LSLSNASSLEMIEF----SRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167
L+ N+ L + ++ S N + F + L L L N S
Sbjct: 156 LSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFD-S 213
Query: 168 GTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISS----- 222
+ L ++ RL EG L + + + + R++
Sbjct: 214 LNVMKTCIQGL--AGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYL 271
Query: 223 -TIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTL 281
I L N++ ++ S + Q L + +L +L
Sbjct: 272 DDIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCKFGQ--FPTLKLKSL 327
Query: 282 QTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT-------------------------ST 316
+ F + +G S + SL L +S N L+ T
Sbjct: 328 KRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT 387
Query: 317 LPQQILSVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLH---------IPEYPENLSF 366
+ L + L +L+ ++ L V +L+NL+ L LS
Sbjct: 388 MSSNFLGLEQLE-HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 446
Query: 367 FELLNLSYNYFGSEVP 382
E+L ++ N F
Sbjct: 447 LEVLKMAGNSFQENFL 462
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 3e-27
Identities = 62/390 (15%), Positives = 109/390 (27%), Gaps = 68/390 (17%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
+ ++L N + L+ L LS S S+L L N +
Sbjct: 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89
Query: 80 RDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRN 139
L + L SL L SL N
Sbjct: 90 SLAL--------------------GAFSGLSSLQKLVAVETNLASLENFP---------- 119
Query: 140 QFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVL 199
LK L LN+ N + S +N + LE L + N + +
Sbjct: 120 ---------IGHLKTLKELNVAHNLIQS-----FKLPEYFSNLTNLEHLDLSSNKIQSIY 165
Query: 200 PHSIANLSS---TIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP-LIGET 255
+ L + + N ++ P + + L+ LT+ ++ + I
Sbjct: 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGL 224
Query: 256 PNLQLLNIGGNHLQG---------SILSSLGNLTLQTYLFNNL---QGNIPSSLANCKSL 303
L++ + + S L L NLT++ + L +I ++
Sbjct: 225 AGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNV 284
Query: 304 LGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNL----LRLHIPE 359
S+ + S +LEL N ++ +LK L +
Sbjct: 285 SSFSLVSVTIERVKD---FSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAF 341
Query: 360 YPENLSFFELLNLSYNYFGSEVPTKGVFNN 389
+L E L+LS N +
Sbjct: 342 SEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 371
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 9e-25
Identities = 61/331 (18%), Positives = 101/331 (30%), Gaps = 30/331 (9%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
T + +LV+ + L L N F L S L +
Sbjct: 282 TNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCKFGQFPTLKLKSLKRL-----TFTS 334
Query: 78 LVRDILTEICSLFKLERLRI------DCGGRIDSLGHLKSLLLLSLAFNQFLSLS----N 127
L LE L + G S SL L L+FN +++S
Sbjct: 335 NKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG 394
Query: 128 ASSLEMIEFSRNQFSGGVSVD-FSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
LE ++F + F L+NL +L++ + N + S LE
Sbjct: 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT-RVAFNGI-----FNGLSSLE 448
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246
L N F+ I + + + ++ P +L +L L M +
Sbjct: 449 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 508
Query: 247 TIPPLIGETPNLQLLNIGGNHLQGSILSSLGNL-TLQTYL---FNNLQGNIPSS--LANC 300
+LQ+L+ NH+ S L + + +L N+ L
Sbjct: 509 LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWI 568
Query: 301 KSLLGLSVSHNKLTSTLPQQILSVTTLSLYL 331
K L V ++ P + LSL +
Sbjct: 569 KDQRQLLVEVERMECATPSDKQGMPVLSLNI 599
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 8e-18
Identities = 35/193 (18%), Positives = 64/193 (33%), Gaps = 15/193 (7%)
Query: 205 NLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIG 264
NL + K + + N + + + L L + ++ +L L +
Sbjct: 25 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 84
Query: 265 GNHLQGSILSSLGNLTLQTYL---FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQI 321
GN +Q L + L+ L NL + + K+L L+V+HN + S +
Sbjct: 85 GNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 144
Query: 322 LSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRL------------HIPEYPENLSFFEL 369
S T +L+L +N + ++ L + L I
Sbjct: 145 FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHK 204
Query: 370 LNLSYNYFGSEVP 382
L L N+ V
Sbjct: 205 LTLRNNFDSLNVM 217
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 2e-30
Identities = 72/423 (17%), Positives = 138/423 (32%), Gaps = 43/423 (10%)
Query: 3 SNNLLQYSKPLCILR-TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPAN 61
+ N L + + L+++ + G + + +LE L L +N S
Sbjct: 89 TANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPK 148
Query: 62 LSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGG-----RIDSLGHLKSLLLLS 116
L L +N + ++ SL + L ++ G L+
Sbjct: 149 GFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLN 208
Query: 117 LAFNQF-------LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLS--WLNLGVNNLGS 167
Q L S SL + F F L +S +NL + +
Sbjct: 209 FGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFN 268
Query: 168 GTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHG 227
++N S L+ L LP + LS+ +K++ + +N+ +
Sbjct: 269 ISSN------TFHCFSGLQELDLTATHLSE-LPSGLVGLST-LKKLVLSANKFENLCQIS 320
Query: 228 IRNLVNLNWLTMESSQLIGTIPP-LIGETPNLQLLNIGGNHLQGSILS--SLGNLTLQTY 284
N +L L+++ + + + NL+ L++ + ++ S L NL+
Sbjct: 321 ASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQS 380
Query: 285 L---FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGS 341
L +N + C L L ++ +L Q L L L ++LL+ S
Sbjct: 381 LNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDIS 440
Query: 342 LPPEVGNLKNLLRLHI------------PEYPENLSFFELLNLSYNYFGSEVPTKGVFNN 389
L L L++ + L E+L LS+ S + + F +
Sbjct: 441 SEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDL-SSID-QHAFTS 498
Query: 390 KTR 392
Sbjct: 499 LKM 501
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 2e-28
Identities = 65/387 (16%), Positives = 134/387 (34%), Gaps = 37/387 (9%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
L + L N + +L+ L S L + L L SN++
Sbjct: 83 LDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHIS 142
Query: 80 RDILTEICSLFKLERLRID-------CGGRIDSLGHLKSLLLLSLAFNQFLSLS----NA 128
L + KL+ L + SL L L+L N + ++
Sbjct: 143 SIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQAT-NLSLNLNGNDIAGIEPGAFDS 201
Query: 129 SSLEMIEFSRNQFSGGV--SVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
+ + + F Q + + S +++L + + + + ++ +E
Sbjct: 202 AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMS----VE 257
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246
+ ++ F + ++ S ++++ + + +S +P G+ L L L + +++
Sbjct: 258 SINLQKHYFFNISSNTFHCFSG-LQELDLTATHLSE-LPSGLVGLSTLKKLVLSANKFEN 315
Query: 247 TIPPLIGETPNLQLLNIGGNHLQGSILS-SLGNLTLQTYL---FNNLQ--GNIPSSLANC 300
P+L L+I GN + + + L NL L ++++ L N
Sbjct: 316 LCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNL 375
Query: 301 KSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLHI-- 357
L L++S+N+ S + L L+L L NL L L++
Sbjct: 376 SHLQSLNLSYNEPLSLKTEAFKECPQLE-LLDLAFTRLKVKDAQSPFQNLHLLKVLNLSH 434
Query: 358 -------PEYPENLSFFELLNLSYNYF 377
+ + L + LNL N+F
Sbjct: 435 SLLDISSEQLFDGLPALQHLNLQGNHF 461
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-26
Identities = 72/397 (18%), Positives = 125/397 (31%), Gaps = 35/397 (8%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
+ N RLI+L L L+ S L L +N L+
Sbjct: 35 TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLI 94
Query: 80 RDILTEICSLFKLERLRID----CGGRIDSLGHLKSLLLLSLAFNQFLSL-----SNASS 130
T + L+ L L + K+L L L N S+
Sbjct: 95 FMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEK 154
Query: 131 LEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFIN-LLTNCSKLERLY 189
L++++F N D S L+ + L+L +N N++ I + + + L
Sbjct: 155 LKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNG------NDIAGIEPGAFDSAVFQSLN 208
Query: 190 FNRNGFEGVLPHSIANLS-STIKQIAMGSNRISSTIPHGIRNLVNLN--WLTMESSQLIG 246
F V+ + N + ++ P L ++ + ++
Sbjct: 209 FGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFN 268
Query: 247 TIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL---FNNLQGNIPSSLANCKSL 303
LQ L++ HL + S L L+ L N + S +N SL
Sbjct: 269 ISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSL 327
Query: 304 LGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGS--LPPEVGNLKNLLRLH----- 356
LS+ N L L L+L ++ + S ++ NL +L L+
Sbjct: 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNE 387
Query: 357 ----IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNN 389
E + ELL+L++ + F N
Sbjct: 388 PLSLKTEAFKECPQLELLDLAFTRL-KVKDAQSPFQN 423
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 9e-25
Identities = 56/381 (14%), Positives = 121/381 (31%), Gaps = 43/381 (11%)
Query: 1 NSSNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIG--RLISLERLILSNNSFSCAI 58
N + N + +P + +N I + + SL +
Sbjct: 185 NLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDIS 244
Query: 59 PANLSSGS--NLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRI----DSLGHLKSL 112
PA ++ ++ + L+ L + + L L +L
Sbjct: 245 PAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLT-ATHLSELPSGLVGLSTL 303
Query: 113 LLLSLAFNQF-----LSLSNASSLEMIEFSRNQFSGGV-SVDFSRLKNLSWLNLGVNNLG 166
L L+ N+F +S SN SL + N + + L+NL L+L +++
Sbjct: 304 KKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIE 363
Query: 167 SGTANELDFINL--------------------LTNCSKLERLYFNRNGFEGVLPHSIANL 206
+ L NL C +LE L + S
Sbjct: 364 TSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQN 423
Query: 207 SSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI---PPLIGETPNLQLLNI 263
+K + + + + + L L L ++ + + L++L +
Sbjct: 424 LHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVL 483
Query: 264 GGNHLQGSILSSLGNLTLQTYLF---NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQ 320
L + +L + ++ N L + +L++ K + L+++ N ++ LP
Sbjct: 484 SFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIY-LNLASNHISIILPSL 542
Query: 321 ILSVTTLSLYLELDNNLLNGS 341
+ ++ + L N L+ +
Sbjct: 543 LPILSQQR-TINLRQNPLDCT 562
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 3e-14
Identities = 31/199 (15%), Positives = 63/199 (31%), Gaps = 14/199 (7%)
Query: 204 ANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNI 263
L ++ + + N + + L+NL +L + Q+ L L +
Sbjct: 29 GTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVL 88
Query: 264 GGNHLQGSILSSLGNLTLQTYLF---NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQ 320
N L ++L +LF + L N K+L L + N ++S +
Sbjct: 89 TANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPK 148
Query: 321 ILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRL----------HIPEYPENLSFFELL 370
L L+ NN ++ ++ +L+ L I + + F+ L
Sbjct: 149 GFPTEKLK-VLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSL 207
Query: 371 NLSYNYFGSEVPTKGVFNN 389
N + +
Sbjct: 208 NFGGTQNLLVIFKGLKNST 226
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 1e-26
Identities = 57/209 (27%), Positives = 83/209 (39%), Gaps = 46/209 (22%)
Query: 466 QFPMISHAELSKATNNFSP------ANKIREGGFNIVY-------NVAMKVANLKQKEAS 512
+F S EL TNNF NK+ EGGF +VY VA+K +
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 70
Query: 513 ----RSFAAEFNALRNIRHRNLIKIITICSSIDFEG------FDFKAISNGQL------- 555
+ F E + +H NL++++ S +G + + + NG L
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSS----DGDDLCLVYVY--MPNGSLLDRLSCL 124
Query: 556 -RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
LS R IA A I +L H + +H D+K +NILLD+ + D GLA+
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFL--H-ENHHIHRDIKSANILLDEAFTAKISDFGLAR 181
Query: 615 FLYGYEPGTTAETASSSIGINGTVGYVAP 643
T + I GT Y+AP
Sbjct: 182 -ASEKFAQTVMTSR-----IVGTTAYMAP 204
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 5e-26
Identities = 78/349 (22%), Positives = 142/349 (40%), Gaps = 40/349 (11%)
Query: 41 LISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCG 100
L R +L S + + ++ KL + + I L LE L ++
Sbjct: 21 LAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVAS--IQGIEYLTNLEYLNLNGN 76
Query: 101 --GRIDSLGHLKSLLLLSLAFNQ---FLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNL 155
I L +L L L + N+ +L N ++L + + + S + L +
Sbjct: 77 QITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISD--ISPLANLTKM 134
Query: 156 SWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAM 215
LNLG N+ S ++ L+N + L L + + V P IANL+ + +++
Sbjct: 135 YSLNLGANHNLS-------DLSPLSNMTGLNYLTVTESKVKDVTP--IANLTD-LYSLSL 184
Query: 216 GSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSS 275
N+I P + +L +L++ T +Q+ P + L L IG N + LS
Sbjct: 185 NYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD--LSP 238
Query: 276 LGNLT-LQT-YLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLEL 333
L NL+ L + N +I + + + L L+V N+++ + +++ L+ L L
Sbjct: 239 LANLSQLTWLEIGTNQISDINA-VKDLTKLKMLNVGSNQISD--ISVLNNLSQLN-SLFL 294
Query: 334 DNNLLNGSLPPEVGNLKNLLRL-----HIPEYP--ENLSFFELLNLSYN 375
+NN L +G L NL L HI + +LS + + +
Sbjct: 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQ 343
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 5e-26
Identities = 74/345 (21%), Positives = 141/345 (40%), Gaps = 38/345 (11%)
Query: 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANL 62
+ L + + + + I I L +LE L L+ N + P L
Sbjct: 30 QKASVTDVVTQEELES-ITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITDISP--L 84
Query: 63 SSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGG--RIDSLGHLKSLLLLSLAFN 120
S+ L L +N + ++ + +L L L ++ I L +L + L+L N
Sbjct: 85 SNLVKLTNLYIGTNKIT--DISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGAN 142
Query: 121 QFLS----LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176
LS LSN + L + + ++ + L +L L+L N + I
Sbjct: 143 HNLSDLSPLSNMTGLNYLTVTESKVKD--VTPIANLTDLYSLSLNYNQIED--------I 192
Query: 177 NLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNW 236
+ L + + L N + P +AN++ + + +G+N+I+ P + NL L W
Sbjct: 193 SPLASLTSLHYFTAYVNQITDITP--VANMTR-LNSLKIGNNKITDLSP--LANLSQLTW 247
Query: 237 LTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLF---NNLQGNI 293
L + ++Q+ + + + L++LN+G N + S +S L NL+ LF N L
Sbjct: 248 LEIGTNQI--SDINAVKDLTKLKMLNVGSNQI--SDISVLNNLSQLNSLFLNNNQLGNED 303
Query: 294 PSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLL 338
+ +L L +S N +T P + S++ + + N ++
Sbjct: 304 MEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMD-SADFANQVI 345
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 9e-24
Identities = 64/320 (20%), Positives = 132/320 (41%), Gaps = 33/320 (10%)
Query: 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANL 62
+ + + + L T L Y+NL N P + L+ L L + N + + L
Sbjct: 52 AGEKVASIQGIEYL-TNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKIT--DISAL 106
Query: 63 SSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC---GGRIDSLGHLKSLLLLSLAF 119
+ +NL +L + +N+ ++ + +L K+ L + + L ++ L L++
Sbjct: 107 QNLTNLRELYLNEDNISD--ISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTE 164
Query: 120 NQ---FLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176
++ ++N + L + + NQ + L +L + VN + I
Sbjct: 165 SKVKDVTPIANLTDLYSLSLNYNQIED--ISPLASLTSLHYFTAYVNQITD--------I 214
Query: 177 NLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNW 236
+ N ++L L N + P +ANLS + + +G+N+IS + +++L L
Sbjct: 215 TPVANMTRLNSLKIGNNKITDLSP--LANLSQ-LTWLEIGTNQISD--INAVKDLTKLKM 269
Query: 237 LTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLT-LQT-YLFNNLQGNIP 294
L + S+Q+ + ++ L L + N L + +G LT L T +L N +I
Sbjct: 270 LNVGSNQI--SDISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIR 327
Query: 295 SSLANCKSLLGLSVSHNKLT 314
LA+ + ++ +
Sbjct: 328 P-LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 81.4 bits (202), Expect = 9e-17
Identities = 58/290 (20%), Positives = 118/290 (40%), Gaps = 39/290 (13%)
Query: 109 LKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSG 168
+L L NQ ++ + + + V L++++ L + + S
Sbjct: 2 AATLATLPAPINQIFPDADLAEGIRAVLQKASVTD--VVTQEELESITKLVVAGEKVASI 59
Query: 169 TA--------------NELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIA 214
N++ I+ L+N KL LY N + + NL++ ++++
Sbjct: 60 QGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDISA--LQNLTN-LRELY 116
Query: 215 MGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILS 274
+ + IS P + NL + L + ++ + + PL L L + + ++ ++
Sbjct: 117 LNEDNISDISP--LANLTKMYSLNLGANHNLSDLSPL-SNMTGLNYLTVTESKVKD--VT 171
Query: 275 SLGNLT-LQT-YLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLE 332
+ NLT L + L N +I S LA+ SL + N++T P + ++T L+ L+
Sbjct: 172 PIANLTDLYSLSLNYNQIEDI-SPLASLTSLHYFTAYVNQITDITP--VANMTRLN-SLK 227
Query: 333 LDNNLLNGSLPPEVGNLKNLLRLHI-------PEYPENLSFFELLNLSYN 375
+ NN + + NL L L I ++L+ ++LN+ N
Sbjct: 228 IGNNKITDL--SPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSN 275
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 7e-26
Identities = 46/203 (22%), Positives = 77/203 (37%), Gaps = 30/203 (14%)
Query: 474 ELSKATNNFSPANKIREGGFNIVY-------NVAMKVANLKQKEASRSFAAEFNALRNIR 526
L + G F V+ VA+K+ Q + S E +L ++
Sbjct: 18 NLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFP-IQDKQSWQNEYEVYSLPGMK 76
Query: 527 HRNLIKIITICSSIDFEGFDFKAI----SNG----QLRLCNLSLTQRVNIAIDVAFAIEY 578
H N+++ I D I G L+ +S + +IA +A + Y
Sbjct: 77 HENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAY 136
Query: 579 L-------RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSS 631
L + +P+I H D+K N+LL ++ + D GLA ++A +
Sbjct: 137 LHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF------EAGKSAGDT 190
Query: 632 IGINGTVGYVAP-VIIAARNLEN 653
G GT Y+AP V+ A N +
Sbjct: 191 HGQVGTRRYMAPEVLEGAINFQR 213
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 108 bits (270), Expect = 1e-25
Identities = 52/212 (24%), Positives = 83/212 (39%), Gaps = 28/212 (13%)
Query: 470 ISHAELSKATNNFSPANKIREGGFNIVY-------NVAMKVANLKQKEASRSFAAEFN-- 520
+ +E S +N I G + VY VA+KV + + ++F E N
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANR---QNFINEKNIY 59
Query: 521 ALRNIRHRNLIKIITICSSIDFEGFDFKAI-----SNG----QLRLCNLSLTQRVNIAID 571
+ + H N+ + I + +G + NG L L +A
Sbjct: 60 RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHS 119
Query: 572 VAFAIEYL------RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
V + YL H +P+I H DL N+L+ D + D GL+ L G
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPG 179
Query: 626 ETASSSIGINGTVGYVAP-VIIAARNLENREK 656
E +++I GT+ Y+AP V+ A NL + E
Sbjct: 180 EEDNAAISEVGTIRYMAPEVLEGAVNLRDXES 211
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 1e-25
Identities = 65/408 (15%), Positives = 112/408 (27%), Gaps = 56/408 (13%)
Query: 3 SNNLLQYSKP-----LCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCA 57
S N +Q L +++ N + I Q + I L L L N S
Sbjct: 161 SYNYIQTITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQGIKLHELTLRGNFNSSN 219
Query: 58 IPANLSSG-SNLIKLSTDSNNLV---------RDILTEICSLFKLE------RLRIDCGG 101
I + L I+ +C + E D
Sbjct: 220 IMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIV 279
Query: 102 RIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLG 161
+ L ++ ++ L ++ + + + R Q L L L L
Sbjct: 280 KFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLK---QFPTLDLPFLKSLTL- 335
Query: 162 VNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSST-IKQIAMGSNRI 220
T N+ L L +RN S ++L + ++ + + N
Sbjct: 336 -------TMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGA 388
Query: 221 SSTIPHGIRNLVNLNWLTMESSQLIGTIPP-LIGETPNLQLLNIGGNHLQGSILSSLGNL 279
+ L L L + S L L L+I + + L
Sbjct: 389 II-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGL 447
Query: 280 TLQTYL---FNNLQGNIPSS-LANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDN 335
T L N+ + N S+ AN +L L +S +L + + L + +
Sbjct: 448 TSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQ-ISWGVFDTLHRLQLLNMSH 506
Query: 336 NLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPT 383
N L L L L L+ S+N +
Sbjct: 507 NNLL-FLDSSH--YNQLYSLST------------LDCSFNRIETSKGI 539
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 3e-25
Identities = 61/391 (15%), Positives = 107/391 (27%), Gaps = 38/391 (9%)
Query: 1 NSSNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGR-LISLERLILSNNSFSCAIP 59
+ S N + + + L + L N + I + L L L F
Sbjct: 187 DMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEF----- 241
Query: 60 ANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAF 119
NL + D+ + L D + L ++ ++ L ++
Sbjct: 242 ---KDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDI-VKFHCLANVSAMSLAGVSI 297
Query: 120 NQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLL 179
+ + + R Q L L L L T N+
Sbjct: 298 KYLEDVPKHFKWQSLSIIRCQLK---QFPTLDLPFLKSLTL--------TMNKGSISFKK 346
Query: 180 TNCSKLERLYFNRNGFEGVLPHSIANLSST-IKQIAMGSNRISSTIPHGIRNLVNLNWLT 238
L L +RN S ++L + ++ + + N + L L L
Sbjct: 347 VALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLD 405
Query: 239 MESSQLIGTIPP-LIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL---FNNLQGNIP 294
+ S L L L+I + + LT L N+ + N
Sbjct: 406 FQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTL 465
Query: 295 SS-LANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLL 353
S+ AN +L L +S +L + + L + +N L L +L
Sbjct: 466 SNVFANTTNLTFLDLSKCQLEQ-ISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLS 524
Query: 354 RLH---------IPEYPENLSFFELLNLSYN 375
L NL+ N
Sbjct: 525 TLDCSFNRIETSKGILQHFPKSLAFFNLTNN 555
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-24
Identities = 62/408 (15%), Positives = 111/408 (27%), Gaps = 54/408 (13%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
L + L N P L SLE L+ + + L KL+ N +
Sbjct: 82 LSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIH 141
Query: 80 RDIL-TEICSLFKLERLRID-------CGGRIDSLGHLKSLLL-LSLAFNQFLSLSNAS- 129
L +L L + + + L + L L ++ N + + +
Sbjct: 142 SCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAF 201
Query: 130 ---SLEMIEFSRNQFSGGV-SVDFSRLKNLSWLNLGVNNLGSG---TANELDFINLLTNC 182
L + N S + L L L + E + L +
Sbjct: 202 QGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDV 261
Query: 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHG--------------- 227
+ E L++ + +++ I
Sbjct: 262 TIDE-FRLTYTNDFSDDIVKFHCLAN-VSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL 319
Query: 228 ----IRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSI---LSSLGNLT 280
+L L LT+ ++ +I P+L L++ N L S S LG +
Sbjct: 320 KQFPTLDLPFLKSLTLTMNKG--SISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNS 377
Query: 281 LQT-YLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLN 339
L+ L N + ++ + L L H+ L LYL++
Sbjct: 378 LRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTK 437
Query: 340 GSLPPEVGNLKNLLRLHI----------PEYPENLSFFELLNLSYNYF 377
L +L L + N + L+LS
Sbjct: 438 IDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQL 485
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 2e-23
Identities = 71/406 (17%), Positives = 128/406 (31%), Gaps = 36/406 (8%)
Query: 3 SNNLLQYSKPLCILR-TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPAN 61
S N L+ K + L++++L L L LIL+ N P +
Sbjct: 40 SFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGS 99
Query: 62 LSSGSNLIKLSTDSNNLVRDILTEICSLFKLERL-----RIDCGGRIDSLGHLKSLLLLS 116
S ++L L L I L L++L I +L +L+ +
Sbjct: 100 FSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVD 159
Query: 117 LAFNQFLSLSNAS---------SLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167
L++N +++ ++ S N + + L L L N S
Sbjct: 160 LSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQGIKLHELTLRGNFN-S 217
Query: 168 GTANELDFINL--LTNCSKLERLYFNRNGFEGVLPHSIANLSS-TIKQIAMGSNRISSTI 224
+ NL L + + + E P + L TI + + S
Sbjct: 218 SNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDD 277
Query: 225 PHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTY 284
L N++ +++ + + + Q L+I L+ L L++
Sbjct: 278 IVKFHCLANVSAMSLAGVSI--KYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPF--LKSL 333
Query: 285 LFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSL-YLELDNNLLNGSLP 343
+G+I SL L +S N L+ + + T SL +L+L N +
Sbjct: 334 TLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMS 392
Query: 344 PEVGNLKNLLRLHI----------PEYPENLSFFELLNLSYNYFGS 379
L+ L L +L L++SY
Sbjct: 393 ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKI 438
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-19
Identities = 52/379 (13%), Positives = 101/379 (26%), Gaps = 67/379 (17%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
+ + I+L N + L+ L LS +L L N
Sbjct: 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91
Query: 78 LVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFS 137
+ S L SL L + SL +
Sbjct: 92 -----IQSFSP---------------GSFSGLTSLENLVAVETKLASLESFP-------- 123
Query: 138 RNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG 197
+L L LN+ N + + +N + L + + N +
Sbjct: 124 -----------IGQLITLKKLNVAHNFI-----HSCKLPAYFSNLTNLVHVDLSYNYIQT 167
Query: 198 VLPHSIANLSS---TIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE 254
+ + + L + M N I I + L+ LT+ + I +
Sbjct: 168 ITVNDLQFLRENPQVNLSLDMSLNPIDF-IQDQAFQGIKLHELTLRGNFNSSNIMKTCLQ 226
Query: 255 T-PNLQLLNIGGNHLQG---------SILSSLGNLTLQT--YLFNNLQGNIPSSLANCKS 302
L + + + SI+ L ++T+ + N + +
Sbjct: 227 NLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLAN 286
Query: 303 LLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNL----LRLHIP 358
+ +S++ + + L + L ++ LK+L + I
Sbjct: 287 VSAMSLAGVSIKYLED---VPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSIS 343
Query: 359 EYPENLSFFELLNLSYNYF 377
L L+LS N
Sbjct: 344 FKKVALPSLSYLDLSRNAL 362
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 1e-12
Identities = 34/194 (17%), Positives = 64/194 (32%), Gaps = 15/194 (7%)
Query: 204 ANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNI 263
++ S+ K I + N + + N L WL + ++ +L L +
Sbjct: 28 DDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLIL 87
Query: 264 GGNHLQGSILSSLGNLTLQTYLF---NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQ 320
GN +Q S LT L L + +L L+V+HN + S
Sbjct: 88 TGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPA 147
Query: 321 ILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRL------------HIPEYPENLSFFE 368
S T ++++L N + ++ L+ ++ I +
Sbjct: 148 YFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLH 207
Query: 369 LLNLSYNYFGSEVP 382
L L N+ S +
Sbjct: 208 ELTLRGNFNSSNIM 221
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 3e-25
Identities = 93/409 (22%), Positives = 154/409 (37%), Gaps = 52/409 (12%)
Query: 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANL 62
SNN L PL L T L I + NN P + L +L L L NN + P L
Sbjct: 76 SNNQLTDITPLKNL-TKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--L 130
Query: 63 SSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGR-IDSLGHLKSLLLLSLAFNQ 121
+ +NL +L SN + ++ + L L++L + L +L +L L ++ N+
Sbjct: 131 KNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK 188
Query: 122 FLS---LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTA-------- 170
L+ ++LE + + NQ S L NL L+L N L
Sbjct: 189 VSDISVLAKLTNLESLIATNNQISD--ITPLGILTNLDELSLNGNQLKDIGTLASLTNLT 246
Query: 171 ------NELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTI 224
N++ + L+ +KL L N + P +A L++ + + + N++
Sbjct: 247 DLDLANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTA-LTNLELNENQLEDIS 303
Query: 225 PHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTY 284
P I NL NL +LT+ + + P + LQ L N + S +SSL NLT +
Sbjct: 304 P--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKV--SDVSSLANLTNINW 357
Query: 285 LF---NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGS 341
L N + P LAN + L ++ T+ +V+ + + L+
Sbjct: 358 LSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALI--- 412
Query: 342 LPPEVGNLKNLLRLHI--------PEYPENLSFFELLNLSYNYFGSEVP 382
P + + + I E S + F V
Sbjct: 413 APATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVT 461
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 1e-20
Identities = 80/362 (22%), Positives = 140/362 (38%), Gaps = 48/362 (13%)
Query: 41 LISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCG 100
L + +L + + + + + L D + + + L L ++
Sbjct: 23 LAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSNN 78
Query: 101 G--RIDSLGHLKSLLLLSLAFNQ---FLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNL 155
I L +L L+ + + NQ L+N ++L + NQ + L NL
Sbjct: 79 QLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITD--IDPLKNLTNL 136
Query: 156 SWLNLGVNNLGSGTA-------------NELDFINLLTNCSKLERLYFNRNGFEGVLPHS 202
+ L L N + +A N++ + L N + LERL + N
Sbjct: 137 NRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISV 194
Query: 203 IANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLN 262
+A L++ ++ + +N+IS P + L NL+ L++ +QL + NL L+
Sbjct: 195 LAKLTN-LESLIATNNQISDITP--LGILTNLDELSLNGNQL--KDIGTLASLTNLTDLD 249
Query: 263 IGGNHLQGSILSSLGNLT-LQT-YLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQ 320
+ N + L+ L LT L L N NI S LA +L L ++ N+L P
Sbjct: 250 LANNQISN--LAPLSGLTKLTELKLGANQISNI-SPLAGLTALTNLELNENQLEDISP-- 304
Query: 321 ILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI-------PEYPENLSFFELLNLS 373
I ++ L+ YL L N ++ V +L L RL NL+ L+
Sbjct: 305 ISNLKNLT-YLTLYFNNISDI--SPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAG 361
Query: 374 YN 375
+N
Sbjct: 362 HN 363
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 7e-16
Identities = 61/277 (22%), Positives = 109/277 (39%), Gaps = 32/277 (11%)
Query: 107 GHLKSLLLLS-LAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNL 165
G L S + NQ + + + + + +V + L ++ L +
Sbjct: 1 GPLGSATITQDTPINQIFTDTALAEKMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGI 58
Query: 166 GSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIP 225
S I+ + + L ++ F+ N + P + NL+ + I M +N+I+ P
Sbjct: 59 KS--------IDGVEYLNNLTQINFSNNQLTDITP--LKNLTK-LVDILMNNNQIADITP 107
Query: 226 HGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL 285
+ NL NL LT+ ++Q+ P + NL L + N + +S+L LT L
Sbjct: 108 --LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQL 161
Query: 286 FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPE 345
Q LAN +L L +S NK++ + +T L L NN ++
Sbjct: 162 SFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKLTNLE-SLIATNNQISDI--TP 216
Query: 346 VGNLKNLLRLHI-------PEYPENLSFFELLNLSYN 375
+G L NL L + +L+ L+L+ N
Sbjct: 217 LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANN 253
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 3e-24
Identities = 40/175 (22%), Positives = 70/175 (40%), Gaps = 26/175 (14%)
Query: 486 NKIREGGFNIVY-------NVAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITI 536
KI G F V+ +VA+K+ + E F E ++ +RH N++ +
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 537 CSSIDF--------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIV 588
+ + + L +R+++A DVA + YL H+ P IV
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL-HNRNPPIV 161
Query: 589 HGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
H +LK N+L+D+ V D GL++ + + GT ++AP
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA--------GTPEWMAP 208
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 3e-24
Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 39/181 (21%)
Query: 486 NKIREGGFNIVY-------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICS 538
+ G F +V +VA+K ++ + ++F E L + H N++K+ C
Sbjct: 14 EVVGRGAFGVVCKAKWRAKDVAIKQ--IESESERKAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 539 ---SIDFEGFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQP-S 586
+ E + G L L + ++ + + + YL H QP +
Sbjct: 72 NPVCLVME---Y--AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL-HSMQPKA 125
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+LL V + D G A + + T G+ ++AP +
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNNK--------GSAAWMAPEV 174
Query: 646 I 646
Sbjct: 175 F 175
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 1e-23
Identities = 33/193 (17%), Positives = 64/193 (33%), Gaps = 39/193 (20%)
Query: 486 NKIREGGFNIVY-------NVAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITI 536
K+ E ++ ++ +KV ++ SR F E LR H N++ ++
Sbjct: 16 TKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGA 75
Query: 537 CSSIDFEGFDFKAI-----SNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQ 584
C S + G L + +Q V A+D+A + +L H +
Sbjct: 76 CQSPPAPHP---TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL-HTLE 131
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP- 643
P I L ++++D+D+ + + + +VAP
Sbjct: 132 PLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-----SPGRM--------YAPAWVAPE 178
Query: 644 VIIAARNLENREK 656
+ NR
Sbjct: 179 ALQKKPEDTNRRS 191
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 103 bits (257), Expect = 3e-23
Identities = 56/372 (15%), Positives = 123/372 (33%), Gaps = 29/372 (7%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
+ + ++ + +++ L LS N S A+L+ + L L+ SN L
Sbjct: 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLY 71
Query: 80 RDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQF--LSLSNASSLEMIEFS 137
++ SL L L ++ + L S+ L A N +S S + I +
Sbjct: 72 E--TLDLESLSTLRTLDLN-NNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLA 128
Query: 138 RNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG 197
N+ + +D + +L+L +N + + ++F L + LE L N
Sbjct: 129 NNKITMLRDLDEGCRSRVQYLDLKLNEI-----DTVNFAELAASSDTLEHLNLQYNFIYD 183
Query: 198 VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257
V + +K + + SN+++ + ++ + W+++ +++L+ I + + N
Sbjct: 184 V--KGQVVFAK-LKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQN 238
Query: 258 LQLLNIGGNHLQGSILSSL--GNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTS 315
L+ ++ GN L N +QT ++ + C
Sbjct: 239 LEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCED 298
Query: 316 T---LPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI---------PEYPEN 363
+++++ L L E N + +
Sbjct: 299 LPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLR 358
Query: 364 LSFFELLNLSYN 375
L
Sbjct: 359 KQAKITLEQKKK 370
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 83.0 bits (205), Expect = 9e-17
Identities = 48/338 (14%), Positives = 100/338 (29%), Gaps = 61/338 (18%)
Query: 57 AIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLS 116
AI +G+ ++ L + ++ L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSS-----LKQA---------------LASLRQSAWNVKELD 40
Query: 117 LAFNQFLSL-----SNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171
L+ N + + + LE++ S N ++D L L L+L N +
Sbjct: 41 LSGNPLSQISAADLAPFTKLELLNLSSNVLYE--TLDLESLSTLRTLDLNNNYVQE---- 94
Query: 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNL 231
L +E L+ N V K I + +N+I+
Sbjct: 95 -------LLVGPSIETLHAANNNISRVSCSRGQGK----KNIYLANNKITMLRDLDEGCR 143
Query: 232 VNLNWLTMESSQLIG-TIPPLIGETPNLQLLNIGGNHLQ----GSILSSLGNLTLQTYLF 286
+ +L ++ +++ L + L+ LN+ N + + + L L L
Sbjct: 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLS---S 200
Query: 287 NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTL-SLYLELDNNLLNGSLPPE 345
N L + + + +S+ +NKL + + + L L N G+L
Sbjct: 201 NKLA-FMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLR-GNGFHCGTLRDF 257
Query: 346 VGNLKNLLRLHI-------PEYPENLSFFELLNLSYNY 376
+ + + + E + L +
Sbjct: 258 FSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYC 295
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 78.4 bits (193), Expect = 2e-15
Identities = 60/375 (16%), Positives = 113/375 (30%), Gaps = 34/375 (9%)
Query: 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANL 62
S+N+L + L L T LR ++L NN ++ S+E L +NN+ S +
Sbjct: 66 SSNVLYETLDLESLST-LRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RVSC-- 116
Query: 63 SSGSNLIKLSTDSNNLVRDILTEICSLFKLERL-----RIDCGGRIDSLGHLKSLLLLSL 117
S G + +N + + +++ L ID + +L L+L
Sbjct: 117 SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176
Query: 118 AFNQFLSLSNA---SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELD 174
+N + + L+ ++ S N+ + + +F ++W++L N L
Sbjct: 177 QYNFIYDVKGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL------- 228
Query: 175 FINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNL 234
L LE NGF + + ++ +A +
Sbjct: 229 IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVA--KQTVKKLTGQNEEECTVP 286
Query: 235 NWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTY-------LFN 287
+ P L+ QGS L L
Sbjct: 287 TLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKE 346
Query: 288 NLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVG 347
+ I ++ + L L + + L L+ + E
Sbjct: 347 QYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIELQHATEEQ 406
Query: 348 NLKNLLRLHIPEYPE 362
+ LLR + Y E
Sbjct: 407 SPLQLLRAIVKRYEE 421
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 2e-14
Identities = 50/324 (15%), Positives = 108/324 (33%), Gaps = 42/324 (12%)
Query: 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
N + ++ + + + ++ N+ L+L N L +A + L +KLE
Sbjct: 8 NGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAAD------LAPFTKLE 61
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246
L + N L + +LS+ ++ + + +N + + ++ L ++ I
Sbjct: 62 LLNLSSNVLYETLD--LESLST-LRTLDLNNNYVQE-----LLVGPSIETLHAANNN-IS 112
Query: 247 TIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL---FNNLQG-NIPSSLANCKS 302
+ G + + + N + G + YL N + N A+ +
Sbjct: 113 RVSCSRG--QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170
Query: 303 LLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLH------ 356
L L++ +N + + Q++ L L+L +N L + PE + + +
Sbjct: 171 LEHLNLQYNFIYD-VKGQVV-FAKLK-TLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKL 226
Query: 357 --IPEYPENLSFFELLNLSYN---------YFGSEVPTKGVFNNKTRFSIIGNGKLCGGL 405
I + E +L N +F + V + N + C
Sbjct: 227 VLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVP 286
Query: 406 DELHLPSCRYKGSIKPSITSLKVL 429
H + + P L L
Sbjct: 287 TLGHYGAYCCEDLPAPFADRLIAL 310
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 63.7 bits (155), Expect = 9e-11
Identities = 48/358 (13%), Positives = 105/358 (29%), Gaps = 34/358 (9%)
Query: 2 SSNNLLQYSKPLCILR-TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPA 60
N + + L ++NL N ++ Q+ L+ L LS+N + +
Sbjct: 152 KLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQVV-FAKLKTLDLSSNKLA-FMGP 208
Query: 61 NLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERL-----RIDCGGRIDSLGHLKSLLLL 115
S + + +S +N L I + LE CG D + + +
Sbjct: 209 EFQSAAGVTWISLRNNKL-VLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTV 267
Query: 116 SLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDF 175
+ + L+ N + + L L + L SG +E +
Sbjct: 268 AKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETER 327
Query: 176 INLLT-NCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNL 234
+ N ++ + + + V+ + + + + +G R L
Sbjct: 328 LECERENQARQREIDALKEQYRTVIDQVTLRKQA-KITLEQKKKALDEQVSNGRRAHAEL 386
Query: 235 NWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIP 294
+ +G LQ + L+ + + +
Sbjct: 387 D---------------------GTLQQAVGQIELQHATEEQSPLQLLRAIVKRYEEMYVE 425
Query: 295 SSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNL 352
++ + +K T L ++ + L+ +L N +L V +NL
Sbjct: 426 QQSVQNNAIRDWDMYQHKETQ-LAEENARLKKLNGEADLALASANATLQELVVREQNL 482
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 8e-23
Identities = 54/336 (16%), Positives = 92/336 (27%), Gaps = 43/336 (12%)
Query: 35 PHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94
H E L ++ LS + N + +
Sbjct: 5 HHHHHHSSGRENLYFQGSTALRPYHDVLS---QWQRHYNADRNRWH-SAWRQANSNNPQI 60
Query: 95 LRIDCGG---RIDSLGHLKSLLL--LSLAFNQFLSL----SNASSLEMIEFSRNQFSGGV 145
D L L L S L+ + +
Sbjct: 61 ETRTGRALKATADLLEDATQPGRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLME-L 119
Query: 146 SVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIAN 205
+ L L L N L + A+ + + ++L L LP +A+
Sbjct: 120 PDTMQQFAGLETLTLARNPLRALPAS-------IASLNRLRELSIRACPELTELPEPLAS 172
Query: 206 LSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGG 265
+ + LVNL L +E + + ++P I NL+ L I
Sbjct: 173 TDA----------------SGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRN 215
Query: 266 NHLQGSILSSLGNLTLQTYLF---NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQIL 322
+ L ++ ++ +L L N P L L + TLP I
Sbjct: 216 SPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIH 274
Query: 323 SVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIP 358
+T L L+L + LP + L + +P
Sbjct: 275 RLTQLE-KLDLRGCVNLSRLPSLIAQLPANCIILVP 309
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 1e-17
Identities = 46/280 (16%), Positives = 82/280 (29%), Gaps = 44/280 (15%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
+ L + + P Q RL L+ + + +P + + L L+ N L
Sbjct: 83 RVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPL- 139
Query: 80 RDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRN 139
+ S+ L L + LS+ L E
Sbjct: 140 ----RALP----------------ASIASLNRL--------RELSIRACPELT--ELPEP 169
Query: 140 QFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVL 199
S S + L NL L L + S + N L+ L + L
Sbjct: 170 LASTDASGEHQGLVNLQSLRLEWTGIRS-------LPASIANLQNLKSLKIRNSPLSA-L 221
Query: 200 PHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQ 259
+I +L + G + + P L L ++ + T+P I L+
Sbjct: 222 GPAIHHLPKLEELDLRGCTALRN-YPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLE 280
Query: 260 LLNIGGNHLQGSILSSLGNLT-LQT-YLFNNLQGNIPSSL 297
L++ G + S + L + +LQ +
Sbjct: 281 KLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHR 320
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 4e-14
Identities = 50/323 (15%), Positives = 96/323 (29%), Gaps = 67/323 (20%)
Query: 124 SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCS 183
++S E + F + S+ + + N N +
Sbjct: 7 HHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADR----------NRWHSAWRQANSN 56
Query: 184 KLERLYFNRNGFEGVLPHSIANLSST-IKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS 242
+ + + + + + + S + P L +L +T++++
Sbjct: 57 NPQIETRTGRALK-ATADLLEDATQPGRVALELRSVPLPQ-FPDQAFRLSHLQHMTIDAA 114
Query: 243 QLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKS 302
L+ +P + + L+ L + N L+ +P+S+A+
Sbjct: 115 GLM-ELPDTMQQFAGLETLTLARNPLR----------------------ALPASIASLNR 151
Query: 303 LLGLSVSHNKLTSTLPQQILSVTTLSL--------YLELDNNLLNGSLPPEVGNLKNLLR 354
L LS+ + LP+ + S L L+ + SLP + NL+NL
Sbjct: 152 LRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKS 210
Query: 355 LH--------IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLD 406
L + +L E L+L P I G L
Sbjct: 211 LKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYP-----------PIFGG---RAPLK 256
Query: 407 ELHLPSCRYKGSIKPSITSLKVL 429
L L C ++ I L L
Sbjct: 257 RLILKDCSNLLTLPLDIHRLTQL 279
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 9e-07
Identities = 21/140 (15%), Positives = 41/140 (29%), Gaps = 12/140 (8%)
Query: 245 IGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLL 304
+G+ + + L G+ L N + AN +
Sbjct: 1 MGSSHHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRW-HSAWRQANSNNPQ 59
Query: 305 GLSVSHNKLTSTLPQQILSVTTLSL-YLELDNNLLNGSLPPEVGNLKNLLRLH------- 356
+ + L + + T LEL + L P + L +L +
Sbjct: 60 IETRTGRALKA-TADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM 117
Query: 357 -IPEYPENLSFFELLNLSYN 375
+P+ + + E L L+ N
Sbjct: 118 ELPDTMQQFAGLETLTLARN 137
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 5e-04
Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 4/100 (4%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
L ++L P G L+RLIL + S +P ++ + L KL
Sbjct: 229 PKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCV 288
Query: 78 LVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSL 117
+ + + I L + + L ++
Sbjct: 289 NLSRLPSLIAQLPANCIILVPP----HLQAQLDQHRPVAR 324
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 2e-22
Identities = 42/197 (21%), Positives = 75/197 (38%), Gaps = 51/197 (25%)
Query: 486 NKIREGGFNIVY---------NVAMKV-------ANLKQKEASRSFAAEFNALRNIRHRN 529
+I +GGF +V+ VA+K + E + F E + N+ H N
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 530 LIKIITICSS-----IDFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEY 578
++K+ + + ++F + G L + + + ++ + +D+A IEY
Sbjct: 85 IVKLYGLMHNPPRMVMEF-------VPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 579 LRHHCQPSIVHGDLKPSNILLDQ-----DVVTHVGDLGLAKFLYGYEPGTTAETASSSIG 633
+ + P IVH DL+ NI L V V D GL++ +
Sbjct: 138 M-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH---SVSGLL------ 187
Query: 634 INGTVGYVAPVIIAARN 650
G ++AP I A
Sbjct: 188 --GNFQWMAPETIGAEE 202
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 1e-21
Identities = 49/302 (16%), Positives = 113/302 (37%), Gaps = 16/302 (5%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
+ + ++ + +++ L LS N S A+L+ + L L+ SN L
Sbjct: 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLY 71
Query: 80 RDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQF--LSLSNASSLEMIEFS 137
++ SL L L ++ + L S+ L A N +S S + I +
Sbjct: 72 E--TLDLESLSTLRTLDLN-NNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLA 128
Query: 138 RNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG 197
N+ + +D + +L+L +N + + ++F L + LE L N
Sbjct: 129 NNKITMLRDLDEGCRSRVQYLDLKLNEI-----DTVNFAELAASSDTLEHLNLQYNFIY- 182
Query: 198 VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257
+ + + +K + + SN+++ + ++ + W+++ +++L+ I + + N
Sbjct: 183 DVKGQV-VFAK-LKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQN 238
Query: 258 LQLLNIGGNHLQ-GSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTST 316
L+ ++ GN G++ + + ++ L
Sbjct: 239 LEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCED 298
Query: 317 LP 318
LP
Sbjct: 299 LP 300
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 1e-20
Identities = 53/341 (15%), Positives = 104/341 (30%), Gaps = 38/341 (11%)
Query: 41 LISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCG 100
+ ++++S A+ + S N+ +L N L + ++ KLE L +
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 101 --GRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWL 158
L L +L L L N L S+E + + N S V SR + +
Sbjct: 69 VLYETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS---RVSCSRGQGKKNI 125
Query: 159 NLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSN 218
L N + + S+++ L N + V +A S T++ + + N
Sbjct: 126 YLANNKITMLRDLD------EGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179
Query: 219 RISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGN 278
I + + L L + S++L + P + +++ N L
Sbjct: 180 FIYD-VKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV--------- 227
Query: 279 LTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLL 338
I +L ++L + N + S +
Sbjct: 228 -------------LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKK 274
Query: 339 NGSLPPEVGNLKNLLRLHIP--EYPENLSFFELLNLSYNYF 377
E + L E L+ L +++
Sbjct: 275 LTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALGHHHH 315
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 6e-18
Identities = 46/311 (14%), Positives = 95/311 (30%), Gaps = 54/311 (17%)
Query: 57 AIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLS 116
AI +G+ ++ L + ++ L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSS-----LKQA---------------LASLRQSAWNVKELD 40
Query: 117 LAFNQFLSL-----SNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171
L+ N + + + LE++ S N ++D L L L+L N +
Sbjct: 41 LSGNPLSQISAADLAPFTKLELLNLSSNVLYE--TLDLESLSTLRTLDLNNNYVQE---- 94
Query: 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNL 231
L +E L+ N V K I + +N+I+
Sbjct: 95 -------LLVGPSIETLHAANNNISRVSCSRGQGK----KNIYLANNKITMLRDLDEGCR 143
Query: 232 VNLNWLTMESSQLIG-TIPPLIGETPNLQLLNIGGNHLQ----GSILSSLGNLTLQTYLF 286
+ +L ++ +++ L + L+ LN+ N + + + L L L
Sbjct: 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLS---S 200
Query: 287 NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTL-SLYLELDNNLLNGSLPPE 345
N L + + + +S+ +NKL + + + L L N G+L
Sbjct: 201 NKLA-FMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLR-GNGFHCGTLRDF 257
Query: 346 VGNLKNLLRLH 356
+ + +
Sbjct: 258 FSKNQRVQTVA 268
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 4e-14
Identities = 38/298 (12%), Positives = 91/298 (30%), Gaps = 52/298 (17%)
Query: 149 FSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSS 208
+ ++L + +L + ++ L + N + +A +
Sbjct: 6 KQNGNRYKIEKVTDSSL-----KQAL-ASLRQSAWNVKELDLSGNPLSQISAADLAPFTK 59
Query: 209 TIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL 268
++ + + SN + T+ + +L L L + ++ + + P+++ L+ N++
Sbjct: 60 -LELLNLSSNVLYETLD--LESLSTLRTLDLNNNY-VQELLVG----PSIETLHAANNNI 111
Query: 269 Q---GSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTS----TLPQQI 321
S N+ L N + + L + N++ + L
Sbjct: 112 SRVSCSRGQGKKNIYLA---NNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS 168
Query: 322 LSVTTLSL------------------YLELDNNLLNGSLPPEVGNLKNLLRLH------- 356
++ L+L L+L +N L + PE + + +
Sbjct: 169 DTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV 227
Query: 357 -IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNG-KLCGGLDELHLPS 412
I + E +L N F N+ ++ K G +E
Sbjct: 228 LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTV 285
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 32/188 (17%), Positives = 61/188 (32%), Gaps = 21/188 (11%)
Query: 199 LPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNL 258
+ N + K + + + + ++ N+ L + + L + L
Sbjct: 2 IHEIKQNGNR-YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 259 QLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLP 318
+LLN+ N L L +L+ L +L N L S+ L ++N ++ +
Sbjct: 61 ELLNLSSNVLYE--TLDLESLSTLRTL--DLNNNYVQELLVGPSIETLHAANNNISR-VS 115
Query: 319 QQILSVTTLSL-YLELDNNLLNGSLPPEVGNLKNLLRLHI----------PEYPENLSFF 367
+ L NN + + G + L + E +
Sbjct: 116 CSRGQ----GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTL 171
Query: 368 ELLNLSYN 375
E LNL YN
Sbjct: 172 EHLNLQYN 179
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 2e-21
Identities = 45/191 (23%), Positives = 70/191 (36%), Gaps = 26/191 (13%)
Query: 486 NKIREGGFNIVY-------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICS 538
+I +G + V+ VA+KV +EAS E +RH N++ I
Sbjct: 43 KQIGKGRYGEVWMGKWRGEKVAVKVFF-TTEEASWFRETEIYQTVLMRHENILGFIAADI 101
Query: 539 SIDFEGFDFKAI----SNGQLR--LCN--LSLTQRVNIAIDVAFAIEYL-----RHHCQP 585
I NG L L + L + +A + +L +P
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKP 161
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP-V 644
+I H DLK NIL+ ++ + DLGLA T E GT Y+ P V
Sbjct: 162 AIAHRDLKSKNILVKKNGTCCIADLGLAVK----FISDTNEVDIPPNTRVGTKRYMPPEV 217
Query: 645 IIAARNLENRE 655
+ + N + +
Sbjct: 218 LDESLNRNHFQ 228
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 3e-21
Identities = 83/410 (20%), Positives = 145/410 (35%), Gaps = 64/410 (15%)
Query: 34 IPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLE 93
I + L+ + +++ + +P + + + + R+ ++
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLTE-MPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 94 RLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSL-SNASSLEMIEFSRNQFSGGVSVDFSRL 152
R+ + L L SL LE + S N + + L
Sbjct: 62 VSRL-------RDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLT-ELPELPQSL 113
Query: 153 KNLSWLNLGVNNLGSGTA---------NELDFINLLTNCSKLERLYFNRNGFEGVLPHSI 203
K+L N + L N+L+ + L N S L+ + + N + LP
Sbjct: 114 KSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK-KLPDLP 172
Query: 204 ANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNI 263
+L + IA G+N++ +P ++NL L + +++ L +P L +L+ +
Sbjct: 173 PSL----EFIAAGNNQLEE-LPE-LQNLPFLTAIYADNNSLK-KLPDLPL---SLESIVA 222
Query: 264 GGNHLQGSILSSLGNLT-LQT-YLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQI 321
G N L L L NL L T Y NNL +P + ++ L+V N LT LP+
Sbjct: 223 GNNIL--EELPELQNLPFLTTIYADNNLLKTLPDLPPSLEA---LNVRDNYLTD-LPELP 276
Query: 322 LSVTTLSLYLELDNNLLNGSLPPEVGNLK--NLLRLHIPEYPENLSFFELLNLSYNYFGS 379
S+T L++ N+ + L NL N I + E LN+S N
Sbjct: 277 QSLTF----LDVSENIFS-GLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKL-I 330
Query: 380 EVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYKGSIKPSITSLKVL 429
E+P L L+ L + +LK L
Sbjct: 331 ELP-----------------ALPPRLERLIASFNHLA-EVPELPQNLKQL 362
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 8e-21
Identities = 74/364 (20%), Positives = 128/364 (35%), Gaps = 58/364 (15%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
L + N E+P L SL + + S P L L +N L
Sbjct: 93 LESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALSDLPP-------LLEYLGVSNNQLE 144
Query: 80 RDILTEICSLFKLERLRIDCGGRIDSL-GHLKSLLLLSLAFNQFLSL---SNASSLEMIE 135
+ L E+ + L+ + +D + L SL ++ NQ L N L I
Sbjct: 145 K--LPELQNSSFLKIIDVD-NNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIY 201
Query: 136 FSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGF 195
N +L + G N L + L N L +Y + N
Sbjct: 202 ADNNSL----KKLPDLPLSLESIVAGNNILEE--------LPELQNLPFLTTIYADNNLL 249
Query: 196 EGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGET 255
+ LP +L + + + N ++ +P ++L L+ S L L
Sbjct: 250 K-TLPDLPPSL----EALNVRDNYLTD-LPELPQSLTFLDVSENIFSGL----SELP--- 296
Query: 256 PNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTS 315
PNL LN N ++ S+ +L + + NN +P+ + L S N L
Sbjct: 297 PNLYYLNASSNEIR-SLCDLPPSLE-ELNVSNNKLIELPALPPRLER---LIASFNHLAE 351
Query: 316 TLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNL----LRLHIPEYPENLSFFELLN 371
+P+ ++ L ++ N L P ++++L +PE P+NL + L+
Sbjct: 352 -VPELPQNLKQLH----VEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNL---KQLH 402
Query: 372 LSYN 375
+ N
Sbjct: 403 VETN 406
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 2e-16
Identities = 65/355 (18%), Positives = 127/355 (35%), Gaps = 58/355 (16%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
L Y+ + NN ++P ++ L+ + + NNS +P +L ++ +N L
Sbjct: 133 LEYLGVSNNQLE-KLP-ELQNSSFLKIIDVDNNSLK-KLPDLPP---SLEFIAAGNNQL- 185
Query: 80 RDILTEICSLFKLERLRIDC---GGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEF 136
+ L E+ +L L + D D L+S++ + + L N L I
Sbjct: 186 -EELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYA 244
Query: 137 SRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFE 196
N ++ +L LN+ N L L + + L+ +G
Sbjct: 245 DNNLLK---TLPDL-PPSLEALNVRDNYLTD-------LPELPQSLTFLDVSENIFSGLS 293
Query: 197 GVLPH------------SIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQL 244
+ P+ S+ +L +++++ + +N++ +P L L S
Sbjct: 294 ELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPALPPRLERLI----ASFNH 348
Query: 245 IGTIPPLIGETPNLQLLNIGGNHLQG--SILSSLGNLTLQTYLFNNLQGNIPSSLANCKS 302
+ +P L NL+ L++ N L+ I S+ +L + N+ +P N K
Sbjct: 349 LAEVPELPQ---NLKQLHVEYNPLREFPDIPESVEDLRM-----NSHLAEVPELPQNLKQ 400
Query: 303 LLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI 357
L V N L P SV L +++ + + L +
Sbjct: 401 L---HVETNPLRE-FPDIPESVE----DLRMNSERVV-DPYEFAHETTDKLEDDV 446
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 6e-08
Identities = 53/292 (18%), Positives = 89/292 (30%), Gaps = 46/292 (15%)
Query: 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANL 62
NN L+ L L FL I NN ++P SLE ++ NN L
Sbjct: 181 GNNQLEELPELQNL-PFLTAIYADNNSLK-KLPDLPL---SLESIVAGNNILE--ELPEL 233
Query: 63 SSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQF 122
+ L + D+N L + + SL L + L L + F+
Sbjct: 234 QNLPFLTTIYADNNLL-KTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGL 292
Query: 123 LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS-----GTANELDF-I 176
L +L + S N+ +L LN+ N L L
Sbjct: 293 SEL--PPNLYYLNASSNEIR----SLCDLPPSLEELNVSNNKLIELPALPPRLERLIASF 346
Query: 177 NLLTN----CSKLERLYFNRNGFEGVLPHSIANLSS---------------TIKQIAMGS 217
N L L++L+ N P ++ +KQ+ + +
Sbjct: 347 NHLAEVPELPQNLKQLHVEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVET 405
Query: 218 NRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE-TPNLQLLNIGGNHL 268
N + P ++ +L +S+ + E T L+ +H
Sbjct: 406 NPLRE-FPDIPESVEDLRM----NSERVVDPYEFAHETTDKLEDDVFEHHHH 452
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 96.9 bits (241), Expect = 5e-21
Identities = 73/376 (19%), Positives = 128/376 (34%), Gaps = 60/376 (15%)
Query: 16 LRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDS 75
L +N+ +G +P + + L++ +N+ + ++PA L L
Sbjct: 38 LNNGNAVLNVGESGLT-TLPDCLPA--HITTLVIPDNNLT-SLPALPP---ELRTLEVSG 90
Query: 76 NNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNA-SSLEMI 134
N L + L +L + +L L L + NQ SL L+ +
Sbjct: 91 NQL-TSLPVLPPGLLELSIFSNP-LTHLPAL--PSGLCKLWIFGNQLTSLPVLPPGLQEL 146
Query: 135 EFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNG 194
S NQ + + S L L N N L S L S L+ L + N
Sbjct: 147 SVSDNQLAS-LPALPSELCKLWAYN---NQLTS----------LPMLPSGLQELSVSDNQ 192
Query: 195 FEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE 254
LP + L ++ +NR++S +P L L + ++L ++P L
Sbjct: 193 LA-SLPTLPSEL----YKLWAYNNRLTS-LPALPSGLKELI---VSGNRL-TSLPVLPS- 241
Query: 255 TPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT 314
L+ L + GN L S+ L ++ N +P SL + S +++ N L+
Sbjct: 242 --ELKELMVSGNRLT-SLPMLPSGLL-SLSVYRNQLTRLPESLIHLSSETTVNLEGNPLS 297
Query: 315 STLPQQILSVTTLSLYL------------------ELDNNLLNGSLPPEVGNLKNLLRLH 356
Q + +T+ Y L + +P G R H
Sbjct: 298 ERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADRWH 357
Query: 357 -IPEYPENLSFFELLN 371
+ +F L+
Sbjct: 358 MFGQEDNADAFSLFLD 373
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 87.3 bits (216), Expect = 6e-18
Identities = 59/297 (19%), Positives = 99/297 (33%), Gaps = 66/297 (22%)
Query: 85 EICSLFKLERLRIDCGG-RIDSL--GHLKSLLLLSLAFNQFLSLSNA-SSLEMIEFSRNQ 140
C L + G + +L + L + N SL L +E S NQ
Sbjct: 35 RACLNNGNAVL--NVGESGLTTLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQ 92
Query: 141 FSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLP 200
+ + V L LS + + +L L + L +L+ N LP
Sbjct: 93 LTS-LPVLPPGLLELSIFSNPLTHL----------PALPSG---LCKLWIFGNQLT-SLP 137
Query: 201 HSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQL 260
L +++++ N+++S +P L L + + ++P L LQ
Sbjct: 138 VLPPGL----QELSVSDNQLAS-LPALPSELCKLWAYNNQ----LTSLPMLPS---GLQE 185
Query: 261 LNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQ 320
L++ N L ++P+ + L L +N+LTS LP
Sbjct: 186 LSVSDNQLA----------------------SLPTLPSE---LYKLWAYNNRLTS-LPAL 219
Query: 321 ILSVTTLSLYLELDNNLLNGSLPPEVGNLKNL--LRLHIPEYPENLSFFELLNLSYN 375
+ L + N L SLP LK L + P S L++ N
Sbjct: 220 PSGLKELIV----SGNRLT-SLPVLPSELKELMVSGNRLTSLPMLPSGLLSLSVYRN 271
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 53.4 bits (128), Expect = 2e-07
Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 18/128 (14%)
Query: 257 NLQLLNIGGNHLQ---GSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKL 313
+LN+G + L + + + L + NNL ++P+ ++L VS N+L
Sbjct: 41 GNAVLNVGESGLTTLPDCLPAHITTLVIP---DNNLT-SLPALPPELRTL---EVSGNQL 93
Query: 314 TSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLK--NLLRLHIPEYPENLSFFELLN 371
TS LP + LS+ LP L + + P + L+
Sbjct: 94 TS-LPVLPPGLLELSI-FSNPLT----HLPALPSGLCKLWIFGNQLTSLPVLPPGLQELS 147
Query: 372 LSYNYFGS 379
+S N S
Sbjct: 148 VSDNQLAS 155
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 2e-05
Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 24/155 (15%)
Query: 287 NNLQGNIPSSLANC--KSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPP 344
+ + + + C L+V + LT+ LP + + T L + +N L SLP
Sbjct: 24 SRGRAAVVQKMRACLNNGNAVLNVGESGLTT-LPDCLPAHIT---TLVIPDNNLT-SLPA 78
Query: 345 EVGNLKNL----LRLH-IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNG 399
L+ L +L +P P L + + + +P+ + I GN
Sbjct: 79 LPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHL-PALPS-----GLCKLWIFGNQ 132
Query: 400 -----KLCGGLDELHLPSCRYKGSIKPSITSLKVL 429
L GL EL + + S+ + L L
Sbjct: 133 LTSLPVLPPGLQELSVSDNQLA-SLPALPSELCKL 166
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 1e-20
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 34/184 (18%)
Query: 486 NKIREGGFNIVY------NVAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITIC 537
+I G F VY +VA+K+ N+ + ++F E LR RH N++ +
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 538 SSIDFEGFDFKAI-----SNGQL------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
++ AI L + + ++IA A ++YL H +
Sbjct: 90 TAPQL------AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL--HAKS- 140
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
I+H DLK +NI L +D +GD GLA + E S G++ ++AP +I
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS------GSILWMAPEVI 194
Query: 647 AARN 650
++
Sbjct: 195 RMQD 198
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 1e-20
Identities = 42/180 (23%), Positives = 71/180 (39%), Gaps = 31/180 (17%)
Query: 486 NKIREGGFNIVY------NVAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITIC 537
I +G F VY VA+++ ++++ ++ ++F E A R RH N++ + C
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 538 SSIDFEGFDFKAI-----SNGQL------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
S AI L L + + IA ++ + YL H +
Sbjct: 99 MS-----PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL--HAKG- 150
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
I+H DLK N+ D V + D GL + G + G + ++AP II
Sbjct: 151 ILHKDLKSKNVFYDNGKV-VITDFGLFSISGVLQAGRREDKLRIQN---GWLCHLAPEII 206
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 2e-20
Identities = 42/191 (21%), Positives = 73/191 (38%), Gaps = 26/191 (13%)
Query: 486 NKIREGGFNIVY-------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICS 538
+ +G + V+ NVA+K+ + + E S E +RH N++ I
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 539 SIDFEGFDFKAI----SNGQLR--LCN--LSLTQRVNIAIDVAFAIEYL-----RHHCQP 585
+ I G L L L + I + +A + +L +P
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP-V 644
+I H DLK NIL+ ++ + DLGLA +T + + GT Y+AP V
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVM----HSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 645 IIAARNLENRE 655
+ ++ +
Sbjct: 189 LDETIQVDCFD 199
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 2e-20
Identities = 72/405 (17%), Positives = 133/405 (32%), Gaps = 43/405 (10%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSF-SCAIPANLSSGSNLIKLSTDSNNL 78
L+ + V IG L +L+ L +++N S +P S+ +NL L SN +
Sbjct: 102 LQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
Query: 79 VRDILTEICSLFKLE--RLRIDCGG-RIDSL----GHLKSLLLLSLAFNQFL------SL 125
T++ L ++ L +D ++ + L L+L N +
Sbjct: 162 QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCI 221
Query: 126 SNASSLEMIEFSRNQFSGG---VSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNC 182
+ LE+ +F D S L+ L L + L D I+L
Sbjct: 222 QGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCL 281
Query: 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS 242
+ + E V S ++ + + + L +L LT +S
Sbjct: 282 TNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTL------KLKSLKRLTF-TS 334
Query: 243 QLIGTIPPLIGETPNLQLLNIGGNHLQGSIL---SSLGNLTLQT-YLFNNLQGNIPSSLA 298
G + P+L+ L++ N L S G +L+ L N + S+
Sbjct: 335 NKGGNAFSEVD-LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFL 393
Query: 299 NCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLHI 357
+ L L H+ L + +YL++ + + L +L L +
Sbjct: 394 GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR-VAFNGIFNGLSSLEVLKM 452
Query: 358 ----------PEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTR 392
P+ L L+LS ++ FN+ +
Sbjct: 453 AGNSFQENFLPDIFTELRNLTFLDLSQCQL-EQLS-PTAFNSLSS 495
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 3e-19
Identities = 70/361 (19%), Positives = 127/361 (35%), Gaps = 30/361 (8%)
Query: 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQ-IGRLISLERLILSNNSFSC----- 56
S N + + +P L + L NN + + I L LE L F
Sbjct: 185 SLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 244
Query: 57 AIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFK---------LERLRIDCGGRIDSLG 107
+ G + + + L +I LF L + I+
Sbjct: 245 KFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNF 304
Query: 108 HLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167
+ L L++ F QF +L SL+ + F+ N+ S L +L +L+L N L
Sbjct: 305 GWQHLELVNCKFGQFPTLK-LKSLKRLTFTSNKGGNAFS--EVDLPSLEFLDLSRNGLSF 361
Query: 168 GTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHG 227
+ L+ L + NG + + L ++ + + +
Sbjct: 362 KGCCSQSDFGT----TSLKYLDLSFNGVI-TMSSNFLGLEQ-LEHLDFQHSNLKQMSEFS 415
Query: 228 I-RNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILS-SLGNLTLQTYL 285
+ +L NL +L + + + +L++L + GN Q + L L T+L
Sbjct: 416 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475
Query: 286 ---FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSL 342
L+ P++ + SL L+++ N+L S +P I T + L N + S
Sbjct: 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSC 534
Query: 343 P 343
P
Sbjct: 535 P 535
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 3e-18
Identities = 81/407 (19%), Positives = 129/407 (31%), Gaps = 45/407 (11%)
Query: 3 SNNLLQYSKPLCILR-TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPAN 61
S N L++ L+ ++L L L LIL+ N
Sbjct: 36 SFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGA 95
Query: 62 LSSGSNLIKLSTDSNNLVRDILTEICSLFKLERL-----RIDCGGRIDSLGHLKSLLLLS 116
S S+L KL NL I L L+ L I + +L +L L
Sbjct: 96 FSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD 155
Query: 117 LAFNQFLSLSNAS---------SLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167
L+ N+ S+ ++ S N + F + L L L NN S
Sbjct: 156 LSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLR-NNFDS 213
Query: 168 GTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRIS------ 221
+ L ++ RL EG L + + + + R++
Sbjct: 214 LNVMKTCIQGL--AGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYL 271
Query: 222 STIPHGIRNLVNLNWLTMESSQLIGTIPPLIGET--PNLQLLNIGGNHLQGSILSSLGNL 279
I L N++ ++ S I + +L+L+N L SL L
Sbjct: 272 DDIIDLFNCLTNVSSFSLVSVT-IERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRL 330
Query: 280 TLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSL-YLELDNNLL 338
T +N GN S + SL L +S N L+ T SL YL+L N +
Sbjct: 331 TFT----SNKGGNAF-SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGV 385
Query: 339 NGSLPPEVGNLKNLLRLHI----------PEYPENLSFFELLNLSYN 375
++ L+ L L +L L++S+
Sbjct: 386 I-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT 431
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 5e-10
Identities = 35/194 (18%), Positives = 64/194 (32%), Gaps = 15/194 (7%)
Query: 204 ANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNI 263
NL + K + + N + + + L L + ++ +L L +
Sbjct: 24 DNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLIL 83
Query: 264 GGNHLQGSILSSLGNLTLQTYLF---NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQ 320
GN +Q L + L+ L NL + + K+L L+V+HN + S +
Sbjct: 84 TGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 143
Query: 321 ILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRL------------HIPEYPENLSFFE 368
S T +L+L +N + ++ L + L I
Sbjct: 144 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLH 203
Query: 369 LLNLSYNYFGSEVP 382
L L N+ V
Sbjct: 204 KLTLRNNFDSLNVM 217
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 91.4 bits (227), Expect = 5e-20
Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 26/191 (13%)
Query: 486 NKIREGGFNIVY-------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICS 538
I +G F V+ VA+K+ + ++E S AE +RH N++ I +
Sbjct: 48 ESIGKGRFGEVWRGKWRGEEVAVKIFS-SREERSWFREAEIYQTVMLRHENILGFIAADN 106
Query: 539 SIDFEGFDFKAI----SNGQLR--LCN--LSLTQRVNIAIDVAFAIEYLR-----HHCQP 585
+ + +G L L +++ + +A+ A + +L +P
Sbjct: 107 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 166
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP-V 644
+I H DLK NIL+ ++ + DLGLA T + GT Y+AP V
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRH----DSATDTIDIAPNHRVGTKRYMAPEV 222
Query: 645 IIAARNLENRE 655
+ + N+++ E
Sbjct: 223 LDDSINMKHFE 233
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 5e-20
Identities = 45/186 (24%), Positives = 66/186 (35%), Gaps = 43/186 (23%)
Query: 486 NKIREGGFNIVY-------NVAMKVANLK----QKEASRSFAAEFNALRNIRHRNLIKII 534
I GGF VY VA+K A + + E ++H N+I +
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 535 TICS-----SIDFEGFDFKAISNGQLR--LCN--LSLTQRVNIAIDVAFAIEYLRHHCQP 585
+C + E F G L L + VN A+ +A + YL
Sbjct: 73 GVCLKEPNLCLVME---F--ARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIV 127
Query: 586 SIVHGDLKPSNILLDQDVVTH--------VGDLGLAKFLYGYEPGTTAETASSSIGINGT 637
I+H DLK SNIL+ Q V + D GLA+ + + A G
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA----------GA 177
Query: 638 VGYVAP 643
++AP
Sbjct: 178 YAWMAP 183
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 6e-20
Identities = 59/335 (17%), Positives = 111/335 (33%), Gaps = 42/335 (12%)
Query: 33 EIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKL 92
+P I L L N +S +L +L + N + + +
Sbjct: 25 AVPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIV-----SAVEP---- 73
Query: 93 ERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSL-----SNASSLEMIEFSRNQFSGGVSV 147
+ +L +L L L N+ + + S+L ++ S N+ +
Sbjct: 74 -----------GAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDY 122
Query: 148 DFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLS 207
F L NL L +G N+L + F L + LE+L + + ++++L
Sbjct: 123 MFQDLYNLKSLEVGDNDLVY--ISHRAFSGL----NSLEQLTLEKCNLTSIPTEALSHLH 176
Query: 208 STIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNH 267
+ + + I++ + + L L L + + T+ P NL L+I +
Sbjct: 177 G-LIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCN 235
Query: 268 LQG---SILSSLGNLTLQTYLFNNLQGNIPS-SLANCKSLLGLSVSHNKLTSTLPQQILS 323
L + L L L N I L L + + +L +
Sbjct: 236 LTAVPYLAVRHLVYLR-FLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAV-VEPYAFR 293
Query: 324 VTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLHI 357
L + N L +L V ++ NL L +
Sbjct: 294 GLNYLRVLNVSGNQLT-TLEESVFHSVGNLETLIL 327
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 90.2 bits (224), Expect = 3e-19
Identities = 58/307 (18%), Positives = 110/307 (35%), Gaps = 36/307 (11%)
Query: 93 ERLRIDCGGRIDSLGHL-----KSLLLLSLAFNQFLSL-----SNASSLEMIEFSRNQFS 142
+ + C + + LL L N+ +L ++ LE +E + N S
Sbjct: 12 QDRAVLCHRK--RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVS 69
Query: 143 GGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHS 202
F+ L NL L L N L + T S L +L + N +L +
Sbjct: 70 AVEPGAFNNLFNLRTLGLRSNRLKLIPLG------VFTGLSNLTKLDISENKIVILLDYM 123
Query: 203 IANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP-LIGETPNLQLL 261
+L + +K + +G N + L +L LT+E + +IP + L +L
Sbjct: 124 FQDLYN-LKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN-LTSIPTEALSHLHGLIVL 181
Query: 262 NIGGNHLQ---GSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLP 318
+ ++ L L + + + +L LS++H LT+ +P
Sbjct: 182 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA-VP 240
Query: 319 QQILSVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLH--------IPEYP-ENLSFFE 368
+ +L L N ++ ++ + L L + + Y L++
Sbjct: 241 YLAVRHLVYLRFLNLSYNPIS-TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLR 299
Query: 369 LLNLSYN 375
+LN+S N
Sbjct: 300 VLNVSGN 306
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 3e-15
Identities = 52/262 (19%), Positives = 103/262 (39%), Gaps = 22/262 (8%)
Query: 20 LRYINLVNNGFNGEIPHQI-GRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNL 78
LR + L +N IP + L +L +L +S N + NL L N+L
Sbjct: 82 LRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 140
Query: 79 VRDILTEICSLFKLERLRIDCGGRI-----DSLGHLKSLLLLSLAFNQFLSLSNA----- 128
V L LE+L ++ + ++L HL L++L L ++ +
Sbjct: 141 VYISHRAFSGLNSLEQLTLE-KCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRL 199
Query: 129 SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188
L+++E S + ++ + NL+ L++ NL + + + + L L
Sbjct: 200 YRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNL-----TAVPY-LAVRHLVYLRFL 253
Query: 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI 248
+ N + + L +++I + +++ P+ R L L L + +Q + T+
Sbjct: 254 NLSYNPISTIEGSMLHELLR-LQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQ-LTTL 311
Query: 249 PP-LIGETPNLQLLNIGGNHLQ 269
+ NL+ L + N L
Sbjct: 312 EESVFHSVGNLETLILDSNPLA 333
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 2e-19
Identities = 62/382 (16%), Positives = 123/382 (32%), Gaps = 29/382 (7%)
Query: 20 LRYINLVNNGFNGEI--PHQIGRLISLERLILSNNSFSC-AIPANLSSGSNLIKLSTDSN 76
L + L G + + L +L RL LS N + + ++L + SN
Sbjct: 99 LFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSN 158
Query: 77 NLVRDILTEICSLFKLERLRIDCGG----RIDSLGHLKSLLLLSLAFNQFLSLS-NASSL 131
+ E+ L S+ K + + L +S N ++
Sbjct: 159 QIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTV 218
Query: 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFN 191
++ N S + ++ G +N+ N + + + L +
Sbjct: 219 DITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSS----VRHLDLS 274
Query: 192 RNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPL 251
+ L +K + + N+I+ L NL L + + L
Sbjct: 275 HGFVFSLNSRVFETLKD-LKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSN 333
Query: 252 IGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHN 311
P + +++ NH+ + L L +L+ N +++ S+ + +S N
Sbjct: 334 FYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTL--DLRDNALTTIHFIPSIPDIFLSGN 391
Query: 312 KLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI----------PEYP 361
KL + LP+ L+ + L +N L N + + + +L L + + P
Sbjct: 392 KLVT-LPKINLTANLIHL---SENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTP 447
Query: 362 ENLSFFELLNLSYNYFGSEVPT 383
E L L N T
Sbjct: 448 SENPSLEQLFLGENMLQLAWET 469
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 92.2 bits (229), Expect = 2e-19
Identities = 61/383 (15%), Positives = 123/383 (32%), Gaps = 48/383 (12%)
Query: 24 NLVNNGFNG--EIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRD 81
+ F ++P L + ERL+LS N ++ L L S
Sbjct: 7 RIAFYRFCNLTQVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLT 63
Query: 82 ILTEIC-SLFKLERLRIDCGGRI-----DSLGHLKSLLLLSLAFNQF-------LSLSNA 128
I E +L L L + +I D+ L L L L F N
Sbjct: 64 IDKEAFRNLPNLRILDLG-SSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNL 122
Query: 129 SSLEMIEFSRNQFSG-GVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLER 187
+L ++ S+NQ + F +L +L ++ N + +EL+ + T L
Sbjct: 123 KALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKT----LSF 178
Query: 188 LYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGT 247
N + + + + + +S N ++ S+ + +
Sbjct: 179 FSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSG-------NGWTVDITGNFSNAISKS 231
Query: 248 IPPLIGETPNLQLLNIGGNHLQG---SILSSLGNLTLQT-YL-FNNLQGNIPSSLANCKS 302
+ ++ G ++++ + + L +++ L + K
Sbjct: 232 QAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKD 291
Query: 303 LLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLHI---- 357
L L++++NK+ + + L L L NLL L L + + +
Sbjct: 292 LKVLNLAYNKINKIADEAFYGLDNLQ-VLNLSYNLLG-ELYSSNFYGLPKVAYIDLQKNH 349
Query: 358 -----PEYPENLSFFELLNLSYN 375
+ + L + L+L N
Sbjct: 350 IAIIQDQTFKFLEKLQTLDLRDN 372
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 81.8 bits (202), Expect = 4e-16
Identities = 64/367 (17%), Positives = 122/367 (33%), Gaps = 46/367 (12%)
Query: 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSN 76
R+ +R+++L + L L+ L L+ N + NL L+ N
Sbjct: 265 RSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYN 324
Query: 77 NLVRDILTEICSLFKLERLRIDCGGRI-----DSLGHLKSLLLLSLAFNQFLSLSNASSL 131
L + L K+ + + I + L+ L L L N ++ S+
Sbjct: 325 LLGELYSSNFYGLPKVAYIDLQ-KNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSI 383
Query: 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFN 191
I S N+ ++ + + ++L N L LD + L L+ L N
Sbjct: 384 PDIFLSGNKLVTLPKINLT----ANLIHLSENRL-----ENLDILYFLLRVPHLQILILN 434
Query: 192 RNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-----RNLVNLNWLTMESSQLIG 246
+N F + + +++Q+ +G N + + L +L L + + L
Sbjct: 435 QNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNS 494
Query: 247 TIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGL 306
P + L+ L++ N L+ L + L +L L
Sbjct: 495 LPPGVFSHLTALRGLSLNSNR-----LTVLSHNDLPA------------------NLEIL 531
Query: 307 SVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSF 366
+S N+L + P +LS+ N + N N + I P ++
Sbjct: 532 DISRNQLLAPNPDVF---VSLSVLDITHNKFICECELSTFINWLNHTNVTIAGPPADIYC 588
Query: 367 FELLNLS 373
+ S
Sbjct: 589 VYPDSFS 595
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 3e-13
Identities = 50/280 (17%), Positives = 89/280 (31%), Gaps = 26/280 (9%)
Query: 116 SLAFNQFLSLS----NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171
+AF +F +L+ ++ E + S N + F L+ L L LG
Sbjct: 7 RIAFYRFCNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDK 66
Query: 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTI--PHGIR 229
N L L + + P + L + ++ + +S + R
Sbjct: 67 -----EAFRNLPNLRILDLGSSKIYFLHPDAFQGLFH-LFELRLYFCGLSDAVLKDGYFR 120
Query: 230 NLVNLNWLTMESSQLIG-TIPPLIGETPNLQLLNIGGNHLQG---SILSSLGNLTLQT-- 283
NL L L + +Q+ + P G+ +L+ ++ N + L L TL
Sbjct: 121 NLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFS 180
Query: 284 YLFNNLQGNIPSSLANC------KSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNL 337
N+L + C L L VS N T + + + S L
Sbjct: 181 LAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAH 240
Query: 338 LNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYF 377
N+K+ + S L+LS+ +
Sbjct: 241 HIMGAGFGFHNIKDPDQNTF--AGLARSSVRHLDLSHGFV 278
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 3e-19
Identities = 58/311 (18%), Positives = 121/311 (38%), Gaps = 29/311 (9%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSG-SNLIKLSTDSNNL 78
++ + + N PH + L L+L N S ++P + L LS +NNL
Sbjct: 95 IQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNL 153
Query: 79 VRDILTEI-CSLFKLERLRIDCGGRIDSL--GHLKSLLLLSLAFNQFLSLSNASSLEMIE 135
I + + L+ L++ R+ + + SL ++++N +L+ ++E ++
Sbjct: 154 -ERIEDDTFQATTSLQNLQLS-SNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELD 211
Query: 136 FSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGF 195
S N + V L+ L L NNL L N L + + N
Sbjct: 212 ASHNSIN---VVRGPVNVELTILKLQHNNLTD--------TAWLLNYPGLVEVDLSYNEL 260
Query: 196 EGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGET 255
E ++ H + ++++ + +NR+ + + + + L L + + + + +
Sbjct: 261 EKIMYHPFVKMQR-LERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNH-LLHVERNQPQF 317
Query: 256 PNLQLLNIGGN---HLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNK 312
L+ L + N L+ S +L NLTL N+ N +L +++ +V
Sbjct: 318 DRLENLYLDHNSIVTLKLSTHHTLKNLTLS---HNDWDCNSLRALF--RNVARPAVDDAD 372
Query: 313 LTSTLPQQILS 323
+ Q+
Sbjct: 373 QHCKIDYQLEH 383
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 1e-18
Identities = 65/411 (15%), Positives = 132/411 (32%), Gaps = 60/411 (14%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSG-SNLIKLSTDSN 76
+++ + + L + + + N++ +PA L + L+ +
Sbjct: 21 CVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDL 79
Query: 77 NLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSL-----SNASSL 131
+ EI + + + ++ L + FN L N L
Sbjct: 80 Q-----IEEIDT---------------YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL 119
Query: 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFN 191
++ RN S F L+ L++ NNL + + L+ L +
Sbjct: 120 TVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIED------DTFQATTSLQNLQLS 173
Query: 192 RNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPL 251
N V I +L + N +S+ + + + L + I +
Sbjct: 174 SNRLTHVDLSLIPSL----FHANVSYNLLST-----LAIPIAVEELDASHNS-INVVRG- 222
Query: 252 IGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL---FNNLQGNIPSSLANCKSLLGLSV 308
L +L + N+L + L N + +N L+ + + L L +
Sbjct: 223 -PVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYI 279
Query: 309 SHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPE------YPE 362
S+N+L + L + TL L+L +N L + L L++
Sbjct: 280 SNNRLVA-LNLYGQPIPTLK-VLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLS 336
Query: 363 NLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSC 413
+ L LS+N + + +F N R ++ + C +L C
Sbjct: 337 THHTLKNLTLSHNDW-DCNSLRALFRNVARPAVDDADQHCKIDYQLEHGLC 386
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 7e-06
Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 17/168 (10%)
Query: 222 STIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGN---HLQGSILSSLGN 278
I ++ + ++ N +++ + L ++L S
Sbjct: 11 KCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQ 70
Query: 279 LTLQTYLFNNLQGNIPS-SLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNL 337
+ L + I + + A ++ L + N + LP + L L L+ N
Sbjct: 71 VE-LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPLLTVLVLERND 128
Query: 338 LNGSLPPEV-GNLKNLLRLHI---------PEYPENLSFFELLNLSYN 375
L+ SLP + N L L + + + + + L LS N
Sbjct: 129 LS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 175
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 90.8 bits (225), Expect = 4e-19
Identities = 68/383 (17%), Positives = 138/383 (36%), Gaps = 37/383 (9%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSG-SNLIKLSTDSNNL 78
++ + + N PH + L L+L N S ++P + L LS +NNL
Sbjct: 101 IQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNL 159
Query: 79 VRDILTEI-CSLFKLERLRIDCGGRIDSL--GHLKSLLLLSLAFNQFLSLSNASSLEMIE 135
I + + L+ L++ R+ + + SL ++++N +L+ ++E ++
Sbjct: 160 -ERIEDDTFQATTSLQNLQLS-SNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELD 217
Query: 136 FSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGF 195
S N + V L+ L L NNL L N L + + N
Sbjct: 218 ASHNSIN---VVRGPVNVELTILKLQHNNLTD--------TAWLLNYPGLVEVDLSYNEL 266
Query: 196 EGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGET 255
E ++ H + ++++ + +NR+ + + + + L L + + L+ + +
Sbjct: 267 EKIMYHPFVKMQR-LERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQF 323
Query: 256 PNLQLLNIGGN---HLQGSILSSLGNLTLQ---------TYLFNNLQ----GNIPSSLAN 299
L+ L + N L+ S +L NLTL LF N+ +
Sbjct: 324 DRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 383
Query: 300 CKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPE 359
L L + + + S+ ++ S + ++++L +
Sbjct: 384 DYQLEHGLCCKESDKPYLDRLLQYIALTSVVEKVQRAQGRCSATDTINSVQSLSHYITQQ 443
Query: 360 YPENLSFFELLNLSYNYFGSEVP 382
L E L N +EV
Sbjct: 444 GGVPLQGNEQLEAEVNELRAEVQ 466
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 82.7 bits (204), Expect = 1e-16
Identities = 71/486 (14%), Positives = 151/486 (31%), Gaps = 64/486 (13%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSG-SNLIKLSTDSN 76
+++ + + L + + + N++ +PA L + L+ +
Sbjct: 27 CVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDL 85
Query: 77 NLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSL-----SNASSL 131
+ EI + + + ++ L + FN L N L
Sbjct: 86 Q-----IEEIDT---------------YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL 125
Query: 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFN 191
++ RN S F L+ L++ NNL + + L+ L +
Sbjct: 126 TVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIED------DTFQATTSLQNLQLS 179
Query: 192 RNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPL 251
N V I +L + N +S+ + + + L + I +
Sbjct: 180 SNRLTHVDLSLIPSL----FHANVSYNLLST-----LAIPIAVEELDASHNS-INVVRGP 229
Query: 252 IGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL---FNNLQGNIPSSLANCKSLLGLSV 308
+ L +L + N+L + + L N + +N L+ + + L L +
Sbjct: 230 V--NVELTILKLQHNNL--TDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYI 285
Query: 309 SHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLH--------IPEY 360
S+N+L + L + TL L+L +N L + L L+ +
Sbjct: 286 SNNRLVA-LNLYGQPIPTLK-VLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK-- 340
Query: 361 PENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYKGSIK 420
+ L LS+N + + +F N R ++ + C +L C +
Sbjct: 341 LSTHHTLKNLTLSHNDW-DCNSLRALFRNVARPAVDDADQHCKIDYQLEHGLCCKESDKP 399
Query: 421 PSITSLKVLIPVIVSCLILLVISFIFYARRKKPAHKDSNMLSMKQQFPMISHAELSKATN 480
L+ + V + S+ ++ + P+ + +L N
Sbjct: 400 YLDRLLQYIALTSVVEKVQRAQGRCSATDTINSVQSLSHYITQQGGVPLQGNEQLEAEVN 459
Query: 481 NFSPAN 486
Sbjct: 460 ELRAEV 465
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 46.1 bits (109), Expect = 4e-05
Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 17/168 (10%)
Query: 222 STIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGN---HLQGSILSSLGN 278
I ++ + ++ N +++ + L ++L S
Sbjct: 17 KCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQ 76
Query: 279 LTLQTYLFNNLQGNIPS-SLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNL 337
+ L + I + + A ++ L + N + LP + L L L+ N
Sbjct: 77 VE-LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPLLTVLVLERND 134
Query: 338 LNGSLPPEV-GNLKNLLRLHI---------PEYPENLSFFELLNLSYN 375
L+ SLP + N L L + + + + + L LS N
Sbjct: 135 LS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 181
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 5e-18
Identities = 41/184 (22%), Positives = 66/184 (35%), Gaps = 34/184 (18%)
Query: 486 NKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITI 536
+ +G F + MK +E R+F E +R + H N++K I +
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 537 CS-----SIDFEGFDFKAISNGQLRL------CNLSLTQRVNIAIDVAFAIEYLRHHCQP 585
+ E I G LR +QRV+ A D+A + YL H
Sbjct: 76 LYKDKRLNFITE-----YIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYL--HSM- 127
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFL------YGYEPGTTAETASSSIGINGTVG 639
+I+H DL N L+ ++ V D GLA+ + + G
Sbjct: 128 NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 640 YVAP 643
++AP
Sbjct: 188 WMAP 191
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 7e-18
Identities = 67/392 (17%), Positives = 132/392 (33%), Gaps = 42/392 (10%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSG-SNLIKLSTDSNNL 78
L +++L +N + G L SL+ L L N + +L +NL L +
Sbjct: 76 LEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVET 135
Query: 79 VRDILTE-ICSLFKLERLRIDCGGRI-----DSLGHLKSLLLLSLAFNQ--------FLS 124
+I L L L I + SL ++ + L+L ++
Sbjct: 136 FSEIRRIDFAGLTSLNELEIK-ALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADI 194
Query: 125 LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANEL-DFINLLTNCS 183
LS+ LE+ + + +F + L + L + NEL + + S
Sbjct: 195 LSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELS 254
Query: 184 KLERLYFNRNGFEGVLPHSIANLS-------STIKQIAMGSNRISSTIPHGIRNLVNLNW 236
++E NG P +S TI+++ + + + L +
Sbjct: 255 EVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKR 314
Query: 237 LTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL------FNNLQ 290
+T+E+S++ +L+ L++ N + L + L N+L+
Sbjct: 315 ITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLR 374
Query: 291 --GNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGN 348
L K+L L +S N +P + +L L + + +
Sbjct: 375 SMQKTGEILLTLKNLTSLDISRNTFHP-MPDSCQWPEKM-RFLNLSSTGIR-VVKT--CI 429
Query: 349 LKNLLRL-----HIPEYPENLSFFELLNLSYN 375
+ L L ++ + L + L +S N
Sbjct: 430 PQTLEVLDVSNNNLDSFSLFLPRLQELYISRN 461
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 2e-17
Identities = 53/351 (15%), Positives = 114/351 (32%), Gaps = 33/351 (9%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
+ ++ L + + L S+ L L + + + + L + +
Sbjct: 174 IHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGS 233
Query: 80 RDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIE---- 135
L KL R ++ L ++ +S +E +
Sbjct: 234 VLTDESFNELLKLLRYILEL--SEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRL 291
Query: 136 -FSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNG 194
+ +S +S L+ + + + + + + + LE L + N
Sbjct: 292 HIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCS------FSQHLKSLEFLDLSENL 345
Query: 195 F--EGVLPHSIANLSSTIKQIAMGSNRISS--TIPHGIRNLVNLNWLTMESSQLIGTIPP 250
E + + +++ + + N + S + L NL L + S +P
Sbjct: 346 MVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDI-SRNTFHPMPD 404
Query: 251 LIGETPNLQLLNIGGNHLQ---GSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLS 307
++ LN+ ++ I +L L + NN + L L L
Sbjct: 405 SCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVS----NNNLDSFSLFL---PRLQELY 457
Query: 308 VSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLHI 357
+S NKL + LP L L +++ N L S+P + L +L ++ +
Sbjct: 458 ISRNKLKT-LPDASLF-PVLL-VMKISRNQLK-SVPDGIFDRLTSLQKIWL 504
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 1e-15
Identities = 61/399 (15%), Positives = 117/399 (29%), Gaps = 41/399 (10%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
++ ++L N + +L+ LIL ++ + S +L L N+
Sbjct: 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNH 85
Query: 78 LVRDILTEICSLFKLERL-----RIDCGGRIDSLGHLKSLLLLSLAFNQFLS------LS 126
L + L L+ L G +L +L L + + S +
Sbjct: 86 LSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFA 145
Query: 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
+SL +E S ++++ L L ++ D ++ + +L
Sbjct: 146 GLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVR-YLELR 204
Query: 187 RLYFNRNGFE----GVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS 242
R F + + L+ + S + I L + + +
Sbjct: 205 DTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLN 264
Query: 243 QLIGTIPPLIG--------ETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL---FNNLQG 291
L P ET ++ L+I +L + + L + + +
Sbjct: 265 GLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFL 324
Query: 292 NIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLS--LYLELDNNLLNGSLPPEVGNL 349
S + KSL L +S N + + L L N L S+ L
Sbjct: 325 VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLR-SMQKTGEIL 383
Query: 350 KNLLRL-----------HIPEYPENLSFFELLNLSYNYF 377
L L +P+ + LNLS
Sbjct: 384 LTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGI 422
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 3e-15
Identities = 67/382 (17%), Positives = 124/382 (32%), Gaps = 50/382 (13%)
Query: 24 NLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83
+ + F IP + +++ L LS N + +L + +NL L S+ +
Sbjct: 11 DGRSRSFT-SIPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRIN---- 63
Query: 84 TEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLS-----NASSLEMIEFSR 138
+E D+ L SL L L+ N SLS SSL+ +
Sbjct: 64 -------TIEG---------DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMG 107
Query: 139 NQFSG-GVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG 197
N + GV+ F L NL L +G S +DF L + L L
Sbjct: 108 NPYQTLGVTSLFPNLTNLQTLRIGNVETFS-EIRRIDFAGL----TSLNELEIKALSLRN 162
Query: 198 VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257
S+ ++ I + + + + + L ++ +L + + L +
Sbjct: 163 YQSQSLKSIRD-IHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEV 221
Query: 258 LQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTL 317
+ S L L + +C +L GL + + +
Sbjct: 222 SSPMKKLAFRGSVLTDESFNEL---LKLLRYILELSEVEFDDC-TLNGLGDFNPSESDVV 277
Query: 318 PQQILSVTTLSL-YLELDNNLLNGSLPPEVGNLKNLLRLHI---------PEYPENLSFF 367
++ V T+++ L + L L L+ + R+ + + ++L
Sbjct: 278 -SELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSL 336
Query: 368 ELLNLSYNYFGSEVPTKGVFNN 389
E L+LS N E
Sbjct: 337 EFLDLSENLMVEEYLKNSACKG 358
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-09
Identities = 41/279 (14%), Positives = 92/279 (32%), Gaps = 46/279 (16%)
Query: 1 NSSNNLLQYSKPLCILRTF-LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIP 59
+ + + L + T +R +++ ++ L ++R+ + N+ +P
Sbjct: 268 DFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFL-VP 326
Query: 60 ANLSSG-SNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLA 118
+ S +L L N +V + L G SL L L+
Sbjct: 327 CSFSQHLKSLEFLDLSENLMVEEYLKNSACK-----------------GAWPSLQTLVLS 369
Query: 119 FNQFLSLSNAS-------SLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171
N S+ +L ++ SRN F + + + +LNL +
Sbjct: 370 QNHLRSMQKTGEILLTLKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLSSTGIRVVKTC 428
Query: 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNL 231
LE L + N + + L +++ + N++ + +P
Sbjct: 429 IP---------QTLEVLDVSNNNLD-SFSLFLPRL----QELYISRNKLKT-LPDAS-LF 472
Query: 232 VNLNWLTMESSQLIGTIPP-LIGETPNLQLLNIGGNHLQ 269
L + + +Q + ++P + +LQ + + N
Sbjct: 473 PVLLVMKISRNQ-LKSVPDGIFDRLTSLQKIWLHTNPWD 510
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 82.9 bits (205), Expect = 7e-17
Identities = 74/377 (19%), Positives = 130/377 (34%), Gaps = 41/377 (10%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSG-SNLIKLSTDSN 76
+ Y++L N RL L+ L + + I N G S+LI L D N
Sbjct: 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89
Query: 77 NLVRDILTEI-CSLFKLERLRIDC----GGRI--DSLGHLKSLLLLSLAFNQFLSL---- 125
+ T L LE L + G + + L SL +L L N +
Sbjct: 90 QF-LQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS 148
Query: 126 --SNASSLEMIEFSRNQFSGGVSVDFSRL--KNLSWLNLGVNNLGSGTANELDFI--NLL 179
N +++ + N+ D K+ + L L L L +
Sbjct: 149 FFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNP 208
Query: 180 TNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMG----SNRISSTIPHGIRNLVNLN 235
+ + L + NGF+ + + + K ++ N SS ++ N
Sbjct: 209 FKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFT 268
Query: 236 WLTMESSQL---------IGTIPPLI-GETPNLQLLNIGGN---HLQGSILSSLGNLTLQ 282
+ +E+S + I + + +L+ L + N + + L +L +
Sbjct: 269 FKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLL-K 327
Query: 283 TYLFNNLQGNIPS-SLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGS 341
L N G+I S N L L +S+N + + L Q L LD N L S
Sbjct: 328 LNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA-LGDQSFLGLPNLKELALDTNQLK-S 385
Query: 342 LPPEV-GNLKNLLRLHI 357
+P + L +L ++ +
Sbjct: 386 VPDGIFDRLTSLQKIWL 402
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 1e-13
Identities = 70/386 (18%), Positives = 123/386 (31%), Gaps = 86/386 (22%)
Query: 43 SLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGR 102
+ + LS NS + + S +L L + I R
Sbjct: 31 HVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVI-------------------R 71
Query: 103 IDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGV 162
++ L SL++L L +NQFL L + F+ L NL L L
Sbjct: 72 NNTFRGLSSLIILKLDYNQFLQLETGA-------------------FNGLANLEVLTLTQ 112
Query: 163 NNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISS 222
NL + F L + LE L N + + P S + + N++ S
Sbjct: 113 CNLDGAVLSGNFFKPL----TSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168
Query: 223 TIPHGI---RNLVNLNWLTMESSQLIGTIPPLIGETP--------NLQLLNIGGNHLQ-- 269
I + L + S L +G ++ L++ GN +
Sbjct: 169 -ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKES 227
Query: 270 --GSILSSLGNLTLQTYLFNN-------LQGNIPSSLANC-------KSLLGLSVSHNKL 313
++ +Q+ + +N N + +S +K+
Sbjct: 228 MAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKI 287
Query: 314 TSTLPQQILSVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLH-----IPEYPE----N 363
+ L + + S T L L N +N + L +LL+L+ + N
Sbjct: 288 FA-LLKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFEN 345
Query: 364 LSFFELLNLSYNYFGSEVPTKGVFNN 389
L E+L+LSYN+ + + F
Sbjct: 346 LDKLEVLDLSYNHIRA-LG-DQSFLG 369
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 1e-09
Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 13/202 (6%)
Query: 201 HSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP-LIGETPNLQ 259
H + L + + + + N I+ L +L +L +E I +L
Sbjct: 23 HQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLI 82
Query: 260 LLNIGGNHLQ---GSILSSLGNLTLQTYLFNNLQGNI--PSSLANCKSLLGLSVSHNKLT 314
+L + N + L NL + T NL G + + SL L + N +
Sbjct: 83 ILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIK 142
Query: 315 STLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSY 374
P L+L N + S+ E L N H LS L +++
Sbjct: 143 KIQPASFFLNMRRFHVLDLTFNKVK-SICEED--LLNFQGKHFTLL--RLSSITLQDMNE 197
Query: 375 NYFGSEVPTKGVFNNKTRFSII 396
+ G E G T + +
Sbjct: 198 YWLGWEKC--GNPFKNTSITTL 217
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 80.9 bits (199), Expect = 5e-16
Identities = 54/282 (19%), Positives = 108/282 (38%), Gaps = 30/282 (10%)
Query: 102 RIDSLGHLKSLLLLSLAFNQ---FLSLSNASSLEMIEFSRNQFSGGVSVD-FSRLKNLSW 157
+I + +L ++ + +S++ I + + SV L N++
Sbjct: 13 QIFPDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIK---SVQGIQYLPNVTK 69
Query: 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSS--TIKQIAM 215
L L N L I LTN L L+ + N + +++L +K +++
Sbjct: 70 LFLNGNKLTD--------IKPLTNLKNLGWLFLDENKIK-----DLSSLKDLKKLKSLSL 116
Query: 216 GSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG-SILS 274
N IS I G+ +L L L + + I I L L L++ N + L+
Sbjct: 117 EHNGISD-IN-GLVHLPQLESLYL-GNNKITDITVL-SRLTKLDTLSLEDNQISDIVPLA 172
Query: 275 SLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELD 334
L L YL N ++ +LA K+L L + + + ++ + D
Sbjct: 173 GLTKLQ-NLYLSKNHISDL-RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTD 230
Query: 335 NNLLNGSLPPEVGNLKNL-LRLHIPEYPENLSFFELLNLSYN 375
+L+ + + G+ + ++ H+PE+ +SF ++
Sbjct: 231 GSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIG 272
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 69.4 bits (169), Expect = 2e-12
Identities = 54/260 (20%), Positives = 98/260 (37%), Gaps = 36/260 (13%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
NL + L S++++I +N+ + N+ KL + N
Sbjct: 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNK-- 76
Query: 80 RDILTEICSLFKLERLR-IDCGG----RIDSLGHLKSLLLLSLAFNQFLS---LSNASSL 131
LT+I L L+ L + + SL LK L LSL N L + L
Sbjct: 77 ---LTDIKPLTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQL 133
Query: 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFN 191
E + N+ + ++ SRL L L+L N + I L +KL+ LY +
Sbjct: 134 ESLYLGNNKIT-DIT-VLSRLTKLDTLSLEDNQISD--------IVPLAGLTKLQNLYLS 183
Query: 192 RNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI--P 249
+N + +A L + + + + S + + NLV N + G++ P
Sbjct: 184 KNHISDLRA--LAGLKN-LDVLELFSQECLNKPINHQSNLVVPNTVK----NTDGSLVTP 236
Query: 250 PLIGETPNLQLLNIGGNHLQ 269
+I + + + N+ + +
Sbjct: 237 EIISDDGDYEKPNVKWHLPE 256
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 78.9 bits (194), Expect = 2e-15
Identities = 57/338 (16%), Positives = 120/338 (35%), Gaps = 60/338 (17%)
Query: 66 SNLIKLSTD-SNNLVRDILTEICSLF-KLERLRIDCGGRIDSLGHLKSLLL-----LSLA 118
+N LS + N + + S + K E+ + R +++ LK L+ L L
Sbjct: 8 NNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECLINQFSELQLN 67
Query: 119 FNQFLSLSNA--SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176
SL + + ++E ++N S+ +L +L+ N L +
Sbjct: 68 RLNLSSLPDNLPPQITVLEITQNALI---SLP-ELPASLEYLDACDNRLST--------- 114
Query: 177 NLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNW 236
L + L+ L + N +LP A L + I +N+++ +P +L
Sbjct: 115 -LPELPASLKHLDVDNNQLT-MLPELPALL----EYINADNNQLTM-LPELPTSLE---V 164
Query: 237 LTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLT--LQTYLFNNLQGN-- 292
L++ ++QL +P L +L+ L++ N L+ S+ + +T +F + N
Sbjct: 165 LSVRNNQL-TFLPELPE---SLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRI 219
Query: 293 --IPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNL------------- 337
IP ++ + + + N L+S + + + T Y
Sbjct: 220 THIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRP 279
Query: 338 ----LNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLN 371
+ P + + + +F L+
Sbjct: 280 LADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLD 317
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 70.4 bits (172), Expect = 9e-13
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 218 NRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLG 277
N S + + + + L + L ++P + P + +L I N L S+
Sbjct: 47 NEAVSLLKECL--INQFSELQLNRLNL-SSLPDNLP--PQITVLEITQNALI-SLPELPA 100
Query: 278 NLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNL 337
+L N L +P A+ K L V +N+LT LP+ + ++ DNN
Sbjct: 101 SLEYLDACDNRLS-TLPELPASLKHL---DVDNNQLTM-LPELPALLEYINA----DNNQ 151
Query: 338 LNGSLPPEVGNLKNLLRLH-----IPEYPENLSFFELLNLSYN 375
L LP +L+ L + +PE PE+L E L++S N
Sbjct: 152 LT-MLPELPTSLEVLSVRNNQLTFLPELPESL---EALDVSTN 190
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 52.7 bits (126), Expect = 3e-07
Identities = 30/161 (18%), Positives = 54/161 (33%), Gaps = 28/161 (17%)
Query: 271 SILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLY 330
S L N + L L ++ L+S LP + T
Sbjct: 31 SAWDKWEKQALPGENRNEAVSLLKECL--INQFSELQLNRLNLSS-LPDNLPPQIT---V 84
Query: 331 LELDNNLLNGSLPPEVGNLK--NLLRLHIPEYPENLSFFELLNLSYNYFGSEVPTKGVFN 388
LE+ N L SLP +L+ + + PE + + L++ N + +P
Sbjct: 85 LEITQNAL-ISLPELPASLEYLDACDNRLSTLPELPASLKHLDVDNNQL-TMLP------ 136
Query: 389 NKTRFSIIGNGKLCGGLDELHLPSCRYKGSIKPSITSLKVL 429
+L L+ ++ + + + TSL+VL
Sbjct: 137 -----------ELPALLEYINADNNQLT-MLPELPTSLEVL 165
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 77.9 bits (192), Expect = 3e-15
Identities = 49/235 (20%), Positives = 90/235 (38%), Gaps = 18/235 (7%)
Query: 129 SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188
S+ + N + F L +L L LG N++ + L L
Sbjct: 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEV------GAFNGLASLNTL 128
Query: 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMESSQLIGT 247
N + + LS ++++ + +N I S IP + +L L + + +
Sbjct: 129 ELFDNWLTVIPSGAFEYLSK-LRELWLRNNPIES-IPSYAFNRVPSLMRLDLGELKKLEY 186
Query: 248 IPPLI-GETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLF---NNLQGNIPSSLANCKSL 303
I NL+ LN+G ++ + +L L L N+ P S SL
Sbjct: 187 ISEGAFEGLFNLKYLNLGMCNI--KDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSL 244
Query: 304 LGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLHI 357
L V +++++ + +L L L +N L+ SLP ++ L+ L+ LH+
Sbjct: 245 KKLWVMNSQVSLIERNAFDGLASLV-ELNLAHNNLS-SLPHDLFTPLRYLVELHL 297
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 72.1 bits (177), Expect = 2e-13
Identities = 61/255 (23%), Positives = 97/255 (38%), Gaps = 39/255 (15%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSG-SNLIKLSTDSNNL 78
RY+NL+ N L LE L L NS I +G ++L L N
Sbjct: 77 TRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLASLNTLELFDNW- 134
Query: 79 VRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNAS-----SLEM 133
LT I + +L L L L N S+ + + SL
Sbjct: 135 ----LTVI---------------PSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMR 175
Query: 134 IEFSRNQFSGGVSVD-FSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNR 192
++ + +S F L NL +LNLG+ N+ + LT LE L +
Sbjct: 176 LDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD--------MPNLTPLVGLEELEMSG 227
Query: 193 NGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP-L 251
N F + P S LSS +K++ + ++++S + L +L L + + L ++P L
Sbjct: 228 NHFPEIRPGSFHGLSS-LKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS-SLPHDL 285
Query: 252 IGETPNLQLLNIGGN 266
L L++ N
Sbjct: 286 FTPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 35/231 (15%), Positives = 71/231 (30%), Gaps = 46/231 (19%)
Query: 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS 242
++ ++ R G V P + S + + + N I R+L +L L + +
Sbjct: 54 NQFSKVVCTRRGLSEV-P---QGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRN 109
Query: 243 QL-----------------------IGTIPP-LIGETPNLQLLNIGGNHL---QGSILSS 275
+ + IP L+ L + N + +
Sbjct: 110 SIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNR 169
Query: 276 LGNLT-LQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELD 334
+ +L L L+ + +L L++ + + + L LE+
Sbjct: 170 VPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD--MPNLTPLVGLE-ELEMS 226
Query: 335 NNLLNGSLPPEV-GNLKNLLRLH--------IPEYP-ENLSFFELLNLSYN 375
N + P L +L +L I + L+ LNL++N
Sbjct: 227 GNHFP-EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHN 276
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 39/158 (24%), Positives = 56/158 (35%), Gaps = 16/158 (10%)
Query: 20 LRYINLVNNGFNGEIPHQI-GRLISLERLILSNNSFSCAIPANLSSG-SNLIKLSTDSNN 77
LR + L NN IP R+ SL RL L I G NL L+ N
Sbjct: 149 LRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCN 207
Query: 78 LVRDILTEICSLFKLERLRIDCGGRIDSLG-----HLKSLLLLSLAFNQFLSL-----SN 127
+ + + L LE L + G + L SL L + +Q +
Sbjct: 208 IKD--MPNLTPLVGLEELEMS-GNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDG 264
Query: 128 ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNL 165
+SL + + N S F+ L+ L L+L N
Sbjct: 265 LASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 3e-15
Identities = 46/235 (19%), Positives = 79/235 (33%), Gaps = 31/235 (13%)
Query: 129 SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINL---------- 178
SS +E N+ F +L L+ L+L N L
Sbjct: 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87
Query: 179 ---------LTNCSKLERLYFNRNGFEGVLPHSI-ANLSSTIKQIAMGSNRISSTIPHGI 228
+LE L F + + + S+ +L + + + + +GI
Sbjct: 88 NGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN-LIYLDISHTHTRV-AFNGI 145
Query: 229 -RNLVNLNWLTMESSQLIGTIPP-LIGETPNLQLLNIGGNHLQ---GSILSSLGNLTLQT 283
L +L L M + P + E NL L++ L+ + +SL +L
Sbjct: 146 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ-VL 204
Query: 284 YLFNNLQGNIPSS-LANCKSLLGLSVSHNKLTSTLPQQILSVTTLSL-YLELDNN 336
+ +N ++ + SL L S N + T +Q L SL +L L N
Sbjct: 205 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM-TSKKQELQHFPSSLAFLNLTQN 258
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-12
Identities = 47/260 (18%), Positives = 85/260 (32%), Gaps = 38/260 (14%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSC-AIPANLSSG-SNLIKLSTDSNN 77
+ L +N +L L +L LS+N S + G ++L L N
Sbjct: 30 ATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNG 89
Query: 78 LVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNAS------SL 131
+ + S F L+ L L + +S S +L
Sbjct: 90 -----VITMSSNFL----------------GLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 128
Query: 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFN 191
++ S + F+ L +L L + N+ ++ T L L +
Sbjct: 129 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP-----DIFTELRNLTFLDLS 183
Query: 192 RNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP- 250
+ E + P + +LSS ++ + M N S + L +L L + ++ T
Sbjct: 184 QCQLEQLSPTAFNSLSS-LQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM-TSKKQ 241
Query: 251 -LIGETPNLQLLNIGGNHLQ 269
L +L LN+ N
Sbjct: 242 ELQHFPSSLAFLNLTQNDFA 261
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 4e-15
Identities = 49/268 (18%), Positives = 104/268 (38%), Gaps = 33/268 (12%)
Query: 111 SLLLLSLAFNQFLSLSNA-----SSLEMIEFSRNQFS---GGVSVDFSRLKNLSWLNLGV 162
++ L L+ N+ +SN+ +L+ + + N + FS L +L L+L
Sbjct: 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDS---FSSLGSLEHLDLSY 109
Query: 163 NNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISS 222
N L + +++ S L L N ++ + S+ + + ++ + +G+ +
Sbjct: 110 NYLSNLSSS------WFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT 163
Query: 223 TIPHGI-RNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG------SILSS 275
I L L L +++S L P + N+ L + + SS
Sbjct: 164 KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSS 223
Query: 276 -----LGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLY 330
L + L T+ F+ L +SL + + ++ L + + + ++ L
Sbjct: 224 VECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQ-VMKLLNQISGLL-E 281
Query: 331 LELDNNLLNGSLPPEV-GNLKNLLRLHI 357
LE N L S+P + L +L ++ +
Sbjct: 282 LEFSRNQLK-SVPDGIFDRLTSLQKIWL 308
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 9e-12
Identities = 51/274 (18%), Positives = 92/274 (33%), Gaps = 43/274 (15%)
Query: 43 SLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEI-----CSLFKLERLRI 97
+++ L LSNN + ++L NL L SN + I SL LE L +
Sbjct: 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG-----INTIEEDSFSSLGSLEHLDL 107
Query: 98 DCGGRIDSL-----GHLKSLLLLSLAFNQFLSLSNAS------SLEMIEFSRNQFSGGVS 146
+ +L L SL L+L N + +L S L+++ +
Sbjct: 108 S-YNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQ 166
Query: 147 VD-FSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIAN 205
F+ L L L + ++L S L + + L + +L +
Sbjct: 167 RKDFAGLTFLEELEIDASDLQSYEP------KSLKSIQNVSHLILHMKQHILLLEIFVDV 220
Query: 206 LSSTIKQIAMGSNRIS----STIPHGI----RNLVNLNWLTMESSQLIGTIPPLIGETPN 257
SS ++ + + + S + G + + L + L+ +
Sbjct: 221 TSS-VECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISG 278
Query: 258 LQLLNIGGNHLQG---SILSSLGNLTLQTYLFNN 288
L L N L+ I L +L + +L N
Sbjct: 279 LLELEFSRNQLKSVPDGIFDRLTSLQ-KIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 23/241 (9%)
Query: 18 TFLRYINLVNNGFNGEIPHQI-GRLISLERLILSNNSFSCAIPANLSSG-SNLIKLSTDS 75
L+ + L +NG N I L SLE L LS N S + ++ S+L L+
Sbjct: 76 VNLQALVLTSNGIN-TIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLG 133
Query: 76 NNLVRDILTEIC--SLFKLERLRIDCGGRIDSL-----GHLKSLLLLSLAFNQFLSL--- 125
N + + L KL+ LR+ + L L L + + S
Sbjct: 134 NPY-KTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPK 192
Query: 126 --SNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI--NLLTN 181
+ ++ + Q + + ++ L L +L + +EL N L
Sbjct: 193 SLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIK 252
Query: 182 CSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTME 240
+ + + +S + ++ N++ S +P GI L +L + +
Sbjct: 253 KFTFRNVKITDESLF-QVMKLLNQISG-LLELEFSRNQLKS-VPDGIFDRLTSLQKIWLH 309
Query: 241 S 241
+
Sbjct: 310 T 310
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 8e-07
Identities = 28/152 (18%), Positives = 51/152 (33%), Gaps = 16/152 (10%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
TFL + + + P + + ++ LIL + + S++ L +
Sbjct: 174 TFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTD 233
Query: 78 LVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNA----SSLEM 133
L +E+ + G +SL + + + + S L
Sbjct: 234 LDTFHFSELST------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLE 281
Query: 134 IEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNL 165
+EFSRNQ F RL +L + L N
Sbjct: 282 LEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 1e-05
Identities = 34/183 (18%), Positives = 61/183 (33%), Gaps = 33/183 (18%)
Query: 204 ANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP-LIGETPNLQLLN 262
+ L+ +K + + +NRI+ ++ VNL L + S+ I TI +L+ L+
Sbjct: 48 SGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG-INTIEEDSFSSLGSLEHLD 106
Query: 263 IGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQIL 322
+ N+L L + F L SL L++ N + +
Sbjct: 107 LSYNYLS----------NLSSSWFKPL-----------SSLTFLNLLGNPYKTLGETSLF 145
Query: 323 SVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLH-----IPEYPE----NLSFFELLNL 372
S T L + N + + L L L + Y ++ L L
Sbjct: 146 SHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLIL 205
Query: 373 SYN 375
Sbjct: 206 HMK 208
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 5e-15
Identities = 47/236 (19%), Positives = 89/236 (37%), Gaps = 20/236 (8%)
Query: 129 SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188
++ ++ NQ F L++L L L N++ + + L L
Sbjct: 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEI------GAFNGLANLNTL 117
Query: 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMESSQLIGT 247
N + + LS +K++ + +N I S IP + +L L + + +
Sbjct: 118 ELFDNRLTTIPNGAFVYLSK-LKELWLRNNPIES-IPSYAFNRIPSLRRLDLGELKRLSY 175
Query: 248 IPPLI-GETPNLQLLNIGGNHLQG----SILSSLGNLTLQTYLFNNLQGNIPSSLANCKS 302
I NL+ LN+ +L+ + L L L L N+L P S
Sbjct: 176 ISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLS---GNHLSAIRPGSFQGLMH 232
Query: 303 LLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLHI 357
L L + +++ ++ +L + L +N L LP ++ L +L R+H+
Sbjct: 233 LQKLWMIQSQIQVIERNAFDNLQSLV-EINLAHNNLT-LLPHDLFTPLHHLERIHL 286
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 3e-13
Identities = 57/255 (22%), Positives = 93/255 (36%), Gaps = 39/255 (15%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSG-SNLIKLSTDSNNL 78
R +NL N + L LE L LS N I +G +NL L N
Sbjct: 66 TRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLANLNTLELFDNR- 123
Query: 79 VRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNAS-----SLEM 133
LT I + +L L L L N S+ + + SL
Sbjct: 124 ----LTTI---------------PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRR 164
Query: 134 IEFSRNQFSGGVSVD-FSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNR 192
++ + +S F L NL +LNL + NL I LT KL+ L +
Sbjct: 165 LDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE--------IPNLTPLIKLDELDLSG 216
Query: 193 NGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLI 252
N + P S L ++++ M ++I + NL +L + + + L +P +
Sbjct: 217 NHLSAIRPGSFQGLMH-LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDL 274
Query: 253 GET-PNLQLLNIGGN 266
+L+ +++ N
Sbjct: 275 FTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 9e-07
Identities = 41/207 (19%), Positives = 70/207 (33%), Gaps = 22/207 (10%)
Query: 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS 242
++ ++ R V P +S+ + + + N+I + ++L +L L + +
Sbjct: 43 NQFSKVICVRKNLREV-P---DGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRN 98
Query: 243 QLIGTIPPLI-GETPNLQLLNIGGNHLQG---SILSSLGNLTLQTYLFNNLQGNIPSSL- 297
I TI NL L + N L L L + +L NN +IPS
Sbjct: 99 H-IRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLK-ELWLRNNPIESIPSYAF 156
Query: 298 ANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLH- 356
SL L + K S + + + YL L L P + L L L
Sbjct: 157 NRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL--REIPNLTPLIKLDELDL 214
Query: 357 -------IPEYP-ENLSFFELLNLSYN 375
I + L + L + +
Sbjct: 215 SGNHLSAIRPGSFQGLMHLQKLWMIQS 241
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 7e-15
Identities = 40/198 (20%), Positives = 67/198 (33%), Gaps = 46/198 (23%)
Query: 490 EGGFNIVY---------NVAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSS 539
+G V+ A+KV N EF L+ + H+N++K+ I
Sbjct: 19 QGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI--- 75
Query: 540 IDFEGFDFKAI-------SNGQL--------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQ 584
E + G L L ++ + + DV + +LR +
Sbjct: 76 --EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-- 131
Query: 585 PSIVHGDLKPSNILL----DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
IVH ++KP NI+ D V + D G A+ L E + GT Y
Sbjct: 132 -GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL---EDDEQFVSLY------GTEEY 181
Query: 641 VAPVIIAARNLENREKRH 658
+ P + L ++
Sbjct: 182 LHPDMYERAVLRKDHQKK 199
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 1e-14
Identities = 65/344 (18%), Positives = 122/344 (35%), Gaps = 47/344 (13%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
L ++ N+ ++ I +L L +LI ++N+ + +LS +NL L+ DSN L
Sbjct: 44 LTSLDCHNSSIT-DMTG-IEKLTGLTKLICTSNNITTL---DLSQNTNLTYLACDSNKLT 98
Query: 80 RDILTEICSLFKLERLRIDCGGRIDSL--GHLKSLLLLSLAFNQF--LSLSNASSLEMIE 135
++ L KL L D ++ L L L+ A N + +S+ + L ++
Sbjct: 99 N---LDVTPLTKLTYLNCD-TNKLTKLDVSQNPLLTYLNCARNTLTEIDVSHNTQLTELD 154
Query: 136 FSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGF 195
N+ +D + L+ L+ N + ELD + L RL + N
Sbjct: 155 CHLNKKIT--KLDVTPQTQLTTLDCSFNKI-----TELDV----SQNKLLNRLNCDTNNI 203
Query: 196 EGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGET 255
+ + + + SN+++ I + L L + + L + +
Sbjct: 204 TKL---DLNQNIQ-LTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLT-ELD--VSTL 253
Query: 256 PNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTS 315
L L+ L + N L + + + + L L +T
Sbjct: 254 SKLTTLHCIQTDL--LEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITE 311
Query: 316 TLPQQILSVTTLS--LYLELDNNLLNGSLPPEVGNLKNLLRLHI 357
L ++ +YL L+N L L V + L L
Sbjct: 312 ------LDLSQNPKLVYLYLNNTELT-ELD--VSHNTKLKSLSC 346
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 2e-14
Identities = 49/318 (15%), Positives = 105/318 (33%), Gaps = 37/318 (11%)
Query: 44 LERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRI 103
+ + + + L L ++++ +T I L L +L I
Sbjct: 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD--MTGIEKLTGLTKLICT-SNNI 76
Query: 104 DSL--GHLKSLLLLSLAFNQF--LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLN 159
+L +L L+ N+ L ++ + L + N+ + +D S+ L++LN
Sbjct: 77 TTLDLSQNTNLTYLACDSNKLTNLDVTPLTKLTYLNCDTNKLT---KLDVSQNPLLTYLN 133
Query: 160 LGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNR 219
N L E+D +++ ++L L + N L + + + + N+
Sbjct: 134 CARNTL-----TEID----VSHNTQLTELDCHLNKKITKLD--VTPQTQ-LTTLDCSFNK 181
Query: 220 ISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNL 279
I+ + + LN L +++ + + + + L L+ N L ++ L L
Sbjct: 182 ITE-LD--VSQNKLLNRLNCDTNNIT-KLD--LNQNIQLTFLDCSSNKLTEIDVTPLTQL 235
Query: 280 TLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLN 339
T N + S L L L + +T + +
Sbjct: 236 TYF-DCSVNPLTELDVS--TLSKLTTLHCIQTDLLE------IDLTHNTQLIYFQAEGCR 286
Query: 340 GSLPPEVGNLKNLLRLHI 357
+V + L L
Sbjct: 287 KIKELDVTHNTQLYLLDC 304
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 3e-14
Identities = 55/346 (15%), Positives = 109/346 (31%), Gaps = 58/346 (16%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
L Y+ +N + + L L L N + ++S L L+ N L
Sbjct: 87 LTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKLT---KLDVSQNPLLTYLNCARNTLT 140
Query: 80 RDILTEICSLFKLERLRIDCGGRIDS--LGHLKSLLLLSLAFNQF--LSLSNASSLEMIE 135
++ +L L +I + L L +FN+ L +S L +
Sbjct: 141 E---IDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITELDVSQNKLLNRLN 197
Query: 136 FSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGF 195
N + +D ++ L++L+ N L E+D T ++L + N
Sbjct: 198 CDTNNIT---KLDLNQNIQLTFLDCSSNKL-----TEIDV----TPLTQLTYFDCSVNPL 245
Query: 196 EGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGET 255
+ +++ L + + I + + L + E + I + +
Sbjct: 246 TELDVSTLSKL----TTLHCIQTDLLE-ID--LTHNTQLIYFQAEGCRKIKELD--VTHN 296
Query: 256 PNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIP--------------------S 295
L LL+ + LS L YL N + S
Sbjct: 297 TQLYLLDCQAAGITELDLSQNPKLV-YLYLNNTELTELDVSHNTKLKSLSCVNAHIQDFS 355
Query: 296 SLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGS 341
S+ +L + + + + + T SL + + +LL+
Sbjct: 356 SVGKIPALNNNFEAEGQTITMPKETL---TNNSLTIAVSPDLLDQF 398
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 6e-08
Identities = 51/342 (14%), Positives = 97/342 (28%), Gaps = 53/342 (15%)
Query: 1 NSSNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPA 60
+ N + T L ++ N E+ + + L RL N+ +
Sbjct: 154 DCHLNKKITKLDVTPQ-TQLTTLDCSFNKIT-ELD--VSQNKLLNRLNCDTNNIT---KL 206
Query: 61 NLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSL--GHLKSLLLLSLA 118
+L+ L L SN L +I ++ L +L + L L L L
Sbjct: 207 DLNQNIQLTFLDCSSNKL-TEI--DVTPLTQLTYFDCS-VNPLTELDVSTLSKLTTLHCI 262
Query: 119 FNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINL 178
L + + ++I F +D + L L+ + ELD
Sbjct: 263 QTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGI-----TELDL--- 314
Query: 179 LTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLT 238
+ KL LY N + + + + L L+
Sbjct: 315 -SQNPKLVYLYLNNTEL--------------------------TELD--VSHNTKLKSLS 345
Query: 239 MESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLA 298
++ + +G+ P L +L N +L + +L + +
Sbjct: 346 CVNAHI--QDFSSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPM- 402
Query: 299 NCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNG 340
N + G T T ++ +N + G
Sbjct: 403 NIEPGDGGVYDQATNTITWENLSTDNPAVTYTFTSENGAIVG 444
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 40/238 (16%), Positives = 85/238 (35%), Gaps = 37/238 (15%)
Query: 146 SVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIAN 205
++ +L L+ L+ +++ + + + L +L N + ++
Sbjct: 35 TISEEQLATLTSLDCHNSSITD--------MTGIEKLTGLTKLICTSNNITTL---DLSQ 83
Query: 206 LSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGG 265
++ + +A SN++++ + + L L +L ++++L + + + P L LN
Sbjct: 84 NTN-LTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLT-KLD--VSQNPLLTYLNCAR 136
Query: 266 NHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVT 325
N L + + N L + + + L L S NK+T L V+
Sbjct: 137 NTL--TEIDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE------LDVS 188
Query: 326 TLSL--YLELDNNLLNGSLPPEVGNLKNLLRLH-----IPEYP-ENLSFFELLNLSYN 375
L L D N + L + L L + E L+ + S N
Sbjct: 189 QNKLLNRLNCDTNNIT-KLD--LNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVN 243
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 1e-14
Identities = 59/352 (16%), Positives = 111/352 (31%), Gaps = 71/352 (20%)
Query: 19 FLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNL 78
LR + + G +P +I L L NN S + +L L +N +
Sbjct: 34 HLRVVQCSDLGLK-AVPKEISP--DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKI 90
Query: 79 VRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNA--SSLEMIEF 136
++I + L+ L L ++ N + + SSL +
Sbjct: 91 -----SKIHE---------------KAFSPLRKLQKLYISKNHLVEIPPNLPSSLVELRI 130
Query: 137 SRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFE 196
N+ FS L+N++ + +G N L + F L KL L +
Sbjct: 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-----KLNYLRISEAKLT 185
Query: 197 GVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLI-GET 255
G+ L ++ + N+I + + L L + +Q I I
Sbjct: 186 GIPKDLPETL----NELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQ-IRMIENGSLSFL 240
Query: 256 PNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTS 315
P L+ L++ N L +P+ L + K L + + N +T
Sbjct: 241 PTLRELHLDNNKLS----------------------RVPAGLPDLKLLQVVYLHTNNITK 278
Query: 316 ---------TLPQQILSVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLHI 357
+ +SL+ +N + + P + + L +
Sbjct: 279 VGVNDFCPVGFGVKRAYYNGISLF---NNPVPYWEVQPATFRCVTDRLAIQF 327
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 8e-12
Identities = 55/253 (21%), Positives = 95/253 (37%), Gaps = 38/253 (15%)
Query: 129 SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188
+++ N S DF L++L L L N + + KL++L
Sbjct: 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEK------AFSPLRKLQKL 107
Query: 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMESSQL-IG 246
Y ++N + P+ ++L ++ + NRI +P G+ L N+N + M + L
Sbjct: 108 YISKNHLVEIPPNLPSSL----VELRIHDNRIRK-VPKGVFSGLRNMNCIEMGGNPLENS 162
Query: 247 TIPPLIGETPNLQLLNIGGNHL---QGSILSSLGNLTLQTYLFNNLQGNIPS-SLANCKS 302
P + L L I L + +L L +L +N I L
Sbjct: 163 GFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNEL----HLDHNKIQAIELEDLLRYSK 218
Query: 303 LLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPE 362
L L + HN++ + + TL L LDNN L+ +P + +LK L
Sbjct: 219 LYRLGLGHNQIRMIENGSLSFLPTLR-ELHLDNNKLS-RVPAGLPDLKLL---------- 266
Query: 363 NLSFFELLNLSYN 375
+++ L N
Sbjct: 267 -----QVVYLHTN 274
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 7e-08
Identities = 39/215 (18%), Positives = 66/215 (30%), Gaps = 23/215 (10%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCA-IPANLSSGSNLIKLSTDSNNL 78
L + + +N L ++ + + N + G L L L
Sbjct: 125 LVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKL 184
Query: 79 VRDILTEICS-LF-KLERLRIDCGGRI-----DSLGHLKSLLLLSLAFNQFLSL-----S 126
T I L L L +D +I + L L L L NQ + S
Sbjct: 185 -----TGIPKDLPETLNELHLD-HNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLS 238
Query: 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
+L + N+ S V LK L + L NN+ N+ + +
Sbjct: 239 FLPTLRELHLDNNKLSR-VPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYN 297
Query: 187 --RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNR 219
L+ N + V P + ++ I G+ +
Sbjct: 298 GISLFNNPVPYWEVQPATFRCVTD-RLAIQFGNYK 331
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 2e-14
Identities = 37/183 (20%), Positives = 68/183 (37%), Gaps = 26/183 (14%)
Query: 487 KIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
K+ EGGF+ V A+K +++ E + R H N+++++ C
Sbjct: 36 KLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 538 SSIDFEGFD-------------FKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQ 584
+ + I + + L+ Q + + + + +E + H +
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI--HAK 153
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT-TAETASSSIGINGTVGYVAP 643
H DLKP+NILL + + DLG + G+ A T T+ Y AP
Sbjct: 154 G-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAP 212
Query: 644 VII 646
+
Sbjct: 213 ELF 215
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 4e-14
Identities = 50/269 (18%), Positives = 110/269 (40%), Gaps = 24/269 (8%)
Query: 103 IDSLGHLKSLLLLSLAFNQFLS---LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLN 159
+ L + LS + + ++L +E NQ + L ++ L
Sbjct: 34 TVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQIT--DLAPLKNLTKITELE 91
Query: 160 LGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNR 219
L N L + ++ + ++ L V P +A LS+ ++ + + N+
Sbjct: 92 LSGNPLKN--------VSAIAGLQSIKTLDLTSTQITDVTP--LAGLSN-LQVLYLDLNQ 140
Query: 220 ISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG-SILSSLGN 278
I++ P + L NL +L++ ++Q + + PL L L N + S L+SL N
Sbjct: 141 ITNISP--LAGLTNLQYLSIGNAQ-VSDLTPL-ANLSKLTTLKADDNKISDISPLASLPN 196
Query: 279 LTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLL 338
L + +L NN ++ S LAN +L +++++ +T+ ++ ++ +
Sbjct: 197 LI-EVHLKNNQISDV-SPLANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAPI 254
Query: 339 NGSLPPEVGNLKNL-LRLHIPEYPENLSF 366
+ + G + L ++ + N+S+
Sbjct: 255 APATISDNGTYASPNLTWNLTSFINNVSY 283
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 47/254 (18%), Positives = 78/254 (30%), Gaps = 46/254 (18%)
Query: 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANL 62
+N + PL L T + + L N I L S++ L L++ + P L
Sbjct: 71 KDNQITDLAPLKNL-TKITELELSGNPLKNVSA--IAGLQSIKTLDLTSTQITDVTP--L 125
Query: 63 SSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGG--RIDSLGHLKSLLLLSLAFN 120
+ SNL L D N + ++ + L L+ L I + L +L L L N
Sbjct: 126 AGLSNLQVLYLDLNQITN--ISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDN 183
Query: 121 QFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLT 180
+ +S + L NL ++L N + ++ L
Sbjct: 184 KISDISP---------------------LASLPNLIEVHLKNNQISD--------VSPLA 214
Query: 181 NCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTME 240
N S L + +I N + N + I + T
Sbjct: 215 NTSNLFIVTLTNQ--------TITNQPVFYNNNLVVPNVVKGPSGAPIAPATISDNGTYA 266
Query: 241 SSQLIGTIPPLIGE 254
S L + I
Sbjct: 267 SPNLTWNLTSFINN 280
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 5e-14
Identities = 41/183 (22%), Positives = 68/183 (37%), Gaps = 30/183 (16%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSS 539
EGGF VY A+K ++E +R+ E ++ + H N+++ + S
Sbjct: 38 EGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASI 97
Query: 540 IDFEGFDFKAI-------SNGQL------RLCNLSLTQR--VNIAIDVAFAIEYLRHHCQ 584
E +A GQL L+ + I A++++ H +
Sbjct: 98 GKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM-HRQK 156
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSS----IGINGTVGY 640
P I+H DLK N+LL + D G A + Y + + + I N T Y
Sbjct: 157 PPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMY 216
Query: 641 VAP 643
P
Sbjct: 217 RTP 219
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 6e-14
Identities = 38/195 (19%), Positives = 73/195 (37%), Gaps = 34/195 (17%)
Query: 480 NNFSPANKIREGGFNIVYNV---------AMK---VANLKQKEASRSFAAEFNALRNIRH 527
++ I G + + K ++ + E + E N LR ++H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVS-EVNLLRELKH 64
Query: 528 RNLIKII---------TICSSIDF-EGFD-FKAISNGQLRLCNLSLTQRVNIAIDVAFAI 576
N+++ T+ +++ EG D I+ G L + + + A+
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 577 EYL--RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGI 634
+ R +++H DLKP+N+ LD +GD GLA+ L A + +
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-----NHDTSFAKTFV-- 177
Query: 635 NGTVGYVAPVIIAAR 649
GT Y++P +
Sbjct: 178 -GTPYYMSPEQMNRM 191
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 73.3 bits (180), Expect = 7e-14
Identities = 40/198 (20%), Positives = 68/198 (34%), Gaps = 46/198 (23%)
Query: 490 EGGFNIVY---------NVAMKVAN-LKQKEASRSFAAEFNALRNIRHRNLIKIITICSS 539
+G V+ A+KV N + EF L+ + H+N++K+ I
Sbjct: 19 QGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI--- 75
Query: 540 IDFEGFDFKAI-------SNGQL--------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQ 584
E + G L L ++ + + DV + +LR +
Sbjct: 76 --EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-- 131
Query: 585 PSIVHGDLKPSNILL----DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
IVH ++KP NI+ D V + D G A+ L E + GT Y
Sbjct: 132 -GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL---EDDEQFVSLY------GTEEY 181
Query: 641 VAPVIIAARNLENREKRH 658
+ P + L ++
Sbjct: 182 LHPDMYERAVLRKDHQKK 199
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 7e-14
Identities = 54/349 (15%), Positives = 108/349 (30%), Gaps = 66/349 (18%)
Query: 19 FLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPAN-LSSGSNLIKLSTDSNN 77
LR + + G ++P + L L NN + I + NL L +N
Sbjct: 32 HLRVVQCSDLGLE-KVPKDLPP--DTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNK 87
Query: 78 LVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNA--SSLEMIE 135
+ ++I + L L L L+ NQ L +L+ +
Sbjct: 88 I-----SKISP---------------GAFAPLVKLERLYLSKNQLKELPEKMPKTLQELR 127
Query: 136 FSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGF 195
N+ + F+ L + + LG N L S F + KL +
Sbjct: 128 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM----KKLSYIRIADTNI 183
Query: 196 EGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP-LIGE 254
+ +L ++ + N+I+ ++ L NL L + + I + +
Sbjct: 184 TTIPQGLPPSL----TELHLDGNKITKVDAASLKGLNNLAKLGLSFNS-ISAVDNGSLAN 238
Query: 255 TPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT 314
TP+L+ L++ N L +P LA+ K + + + +N ++
Sbjct: 239 TPHLRELHLNNNKLV----------------------KVPGGLADHKYIQVVYLHNNNIS 276
Query: 315 STLPQQILSVTTLSLYLEL------DNNLLNGSLPPEV-GNLKNLLRLH 356
+ + N + + P + +
Sbjct: 277 AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQ 325
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 37/215 (17%), Positives = 75/215 (34%), Gaps = 22/215 (10%)
Query: 20 LRYINLVNNGFNGEIPHQI-GRLISLERLILSNNSF-SCAIPANLSSG-SNLIKLSTDSN 76
L+ + + N ++ + L + + L N S I G L +
Sbjct: 123 LQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADT 181
Query: 77 NLVRDILTEICSLFKLERLRIDCGGRI-----DSLGHLKSLLLLSLAFNQFLSL-----S 126
N+ I + L L +D G +I SL L +L L L+FN ++ +
Sbjct: 182 NI-TTIPQGLPP--SLTELHLD-GNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLA 237
Query: 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
N L + + N+ V + K + + L NN+ + +N+ T +
Sbjct: 238 NTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYS 296
Query: 187 RLY--FNRNGFEGVLPHSIANLSSTIKQIAMGSNR 219
+ N + + P + + + +G+ +
Sbjct: 297 GVSLFSNPVQYWEIQPSTFRCVYV-RAAVQLGNYK 330
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 73.7 bits (181), Expect = 8e-14
Identities = 58/340 (17%), Positives = 115/340 (33%), Gaps = 19/340 (5%)
Query: 1 NSSNNLLQYSKP--LCILRTF-LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCA 57
+ P L T L + N F+ + + + +LE +
Sbjct: 146 VLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNK 205
Query: 58 IPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSL 117
LS + L SN + +I T S ++ +L S+ ++K L
Sbjct: 206 CSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDF 265
Query: 118 AFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFIN 177
S ++ +L + + + F S + N++ N V+
Sbjct: 266 RDFD-YSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPS--- 321
Query: 178 LLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISS--TIPHGIRNLVNLN 235
S L F+ N + + +L+ + + + N++ I + +L
Sbjct: 322 ---KISPFLHLDFSNNLLTDTVFENCGHLTEL-ETLILQMNQLKELSKIAEMTTQMKSLQ 377
Query: 236 WLTMESSQLIGTIPPLI-GETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIP 294
L + + + T +L LN+ N L +I L L +N +IP
Sbjct: 378 QLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKSIP 437
Query: 295 SSLANCKSLLGLSVSHNKLTSTLPQQIL----SVTTLSLY 330
+ ++L L+V+ N+L S +P I S+ + L+
Sbjct: 438 KQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLH 476
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 6e-12
Identities = 56/400 (14%), Positives = 121/400 (30%), Gaps = 61/400 (15%)
Query: 43 SLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGR 102
L +S N S +++ S S L L N + ++ +LE L + +
Sbjct: 22 KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLS-HNK 80
Query: 103 IDSL--GHLKSLLLLSLAFNQFLSL------SNASSLEMIEFSRNQFSGGV--------- 145
+ + +L L L+FN F +L N S L+ + S
Sbjct: 81 LVKISCHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNI 140
Query: 146 -------------SVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTN----CSKLERL 188
D L++ + +L + + + + +++ T S ++ +
Sbjct: 141 SKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCV 200
Query: 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLV--------NLNWLTME 240
+ + + + + + + + + I LV +++ + ++
Sbjct: 201 LEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQ 260
Query: 241 SSQLIGTIPPLIGETPNLQLLNIGGNHLQGS---ILSSLGNLTLQTYLFNNLQGNIPSSL 297
L + + + I N+ ++ + + +
Sbjct: 261 GQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCP 320
Query: 298 ANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVG---NLKNLLR 354
+ L L S+N LT T+ + +T L L L N L L +K+L +
Sbjct: 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELE-TLILQMNQLK-ELSKIAEMTTQMKSLQQ 378
Query: 355 LHI----------PEYPENLSFFELLNLSYNYFGSEVPTK 384
L I LN+S N +
Sbjct: 379 LDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRC 418
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 31/176 (17%), Positives = 54/176 (30%), Gaps = 15/176 (8%)
Query: 2 SSNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPAN 61
+ + + +++ NN + G L LE LIL N +
Sbjct: 308 TVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK-ELSKI 366
Query: 62 LSSGSNLIKLST---DSNNLVRDILTEICS-LFKLERLRIDC----GGRIDSLGHLKSLL 113
+ + L N++ D CS L L + L +
Sbjct: 367 AEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL--PPRIK 424
Query: 114 LLSLAFNQFLSLSNA----SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNL 165
+L L N+ S+ +L+ + + NQ F RL +L + L N
Sbjct: 425 VLDLHSNKIKSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPW 480
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 1e-13
Identities = 51/201 (25%), Positives = 78/201 (38%), Gaps = 43/201 (21%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAA-EFNALRNIRHRN 529
+F P + GGF +V+ N A+K L +E +R E AL + H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 530 LIKIITICSSIDFEGFDFKAISNG-------QLRLC-NLSLTQRVN-------------- 567
I+ ++ + K + Q++LC +L +N
Sbjct: 65 ---IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 568 -IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL-YGYEPGTTA 625
I + +A A+E+L H ++H DLKPSNI D V VGD GL + E T
Sbjct: 122 HIFLQIAEAVEFL-HSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 626 ETASSSIGINGTVG---YVAP 643
+ G VG Y++P
Sbjct: 179 TPMPAYARHTGQVGTKLYMSP 199
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 73.2 bits (179), Expect = 2e-13
Identities = 41/187 (21%), Positives = 70/187 (37%), Gaps = 39/187 (20%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSS 539
GGF V VA+K + +R + E ++ + H N++ +
Sbjct: 24 TGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDG 83
Query: 540 IDFEGFDFKAI------SNGQL--------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQP 585
+ + + G L C L + D++ A+ YL +
Sbjct: 84 LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN--- 140
Query: 586 SIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
I+H DLKP NI+L Q ++ + DLG AK L + G GT+ Y+A
Sbjct: 141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFV------GTLQYLA 191
Query: 643 PVIIAAR 649
P ++ +
Sbjct: 192 PELLEQK 198
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 2e-13
Identities = 55/273 (20%), Positives = 106/273 (38%), Gaps = 32/273 (11%)
Query: 103 IDSLGHLKSLLLLSLAFNQF---LSLSNASSLEMIEFSRNQFSGGVSVD-FSRLKNLSWL 158
I S + +L ++ + +S++ I + + SV L N++ L
Sbjct: 17 IFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIK---SVQGIQYLPNVTKL 73
Query: 159 NLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSS--TIKQIAMG 216
L N L I L N L L+ + N + +++L +K +++
Sbjct: 74 FLNGNKLTD--------IKPLANLKNLGWLFLDENKVK-----DLSSLKDLKKLKSLSLE 120
Query: 217 SNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSL 276
N IS + +L L L + + I I L L L++ N + S + L
Sbjct: 121 HNGISDING--LVHLPQLESLYL-GNNKITDITVL-SRLTKLDTLSLEDNQI--SDIVPL 174
Query: 277 GNLT-LQT-YLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELD 334
LT LQ YL N ++ +LA K+L L + + + ++ + D
Sbjct: 175 AGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTD 233
Query: 335 NNLLNGSLPPEVGNLKNL-LRLHIPEYPENLSF 366
+L+ + + G+ + ++ H+PE+ +SF
Sbjct: 234 GSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSF 266
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 1e-10
Identities = 50/281 (17%), Positives = 104/281 (37%), Gaps = 45/281 (16%)
Query: 40 RLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99
+ L S + A+ + +++ ++ +++++ + I L + +L ++
Sbjct: 22 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS--VQGIQYLPNVTKLFLNG 77
Query: 100 GG--RIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSW 157
I L +LK+L L L N+ LS+ LK L
Sbjct: 78 NKLTDIKPLANLKNLGWLFLDENKVKDLSS---------------------LKDLKKLKS 116
Query: 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGS 217
L+L N + IN L + +LE LY N + ++ L+ + +++
Sbjct: 117 LSLEHNGISD--------INGLVHLPQLESLYLGNNKITDI--TVLSRLTK-LDTLSLED 165
Query: 218 NRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLG 277
N+IS +P + L L L + + I + L NL +L + ++
Sbjct: 166 NQISDIVP--LAGLTKLQNLYLSKNH-ISDLRAL-AGLKNLDVLELFSQECLNKPINHQS 221
Query: 278 NLTLQTYLFNNLQGNI--PSSLANCKSLLGLSVSHNKLTST 316
NL + + N G++ P +++ +V + T
Sbjct: 222 NLVVPNTV-KNTDGSLVTPEIISDDGDYEKPNVKWHLPEFT 261
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 41/188 (21%), Positives = 69/188 (36%), Gaps = 22/188 (11%)
Query: 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANL 62
+N+ ++ + + L + + L N P + L +L L L N ++L
Sbjct: 54 NNSDIKSVQGIQYL-PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSL 108
Query: 63 SSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR-IDCGG----RIDSLGHLKSLLLLSL 117
L LS + N +++I L L +L + G I L L L LSL
Sbjct: 109 KDLKKLKSLSLEHNG-----ISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSL 163
Query: 118 AFNQFLS---LSNASSLEMIEFSRNQFSGGVSVD-FSRLKNLSWLNLGVNNLGSGTANEL 173
NQ L+ + L+ + S+N S + + LKNL L L + N
Sbjct: 164 EDNQISDIVPLAGLTKLQNLYLSKNHIS---DLRALAGLKNLDVLELFSQECLNKPINHQ 220
Query: 174 DFINLLTN 181
+ +
Sbjct: 221 SNLVVPNT 228
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 3e-13
Identities = 36/205 (17%), Positives = 68/205 (33%), Gaps = 32/205 (15%)
Query: 476 SKATNNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIR 526
+ ++F + +G F V A+K +++ S + E L ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLN 60
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNG-----QLRLCN----LSLTQRVNIAIDVAFAIE 577
H+ +++ A+ Q+ C L N+
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 578 YLR------HHC-QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
R + I+H DLKP NI +D+ +GD GLAK ++ ++ +
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 631 SIGIN------GTVGYVAPVIIAAR 649
+ GT YVA ++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGT 205
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 4e-13
Identities = 40/189 (21%), Positives = 76/189 (40%), Gaps = 42/189 (22%)
Query: 486 NKIREGGFNIVY--------NVAMKVANLKQ--KEASRSFAAEFNALRNIRHRNL----- 530
+I GG + V+ A+K NL++ + S+ E L ++ +
Sbjct: 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93
Query: 531 ---------IKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRH 581
I ++ C +ID + + ++ +R + ++ A+ +
Sbjct: 94 YDYEITDQYIYMVMECGNIDL----NSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQ 145
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYV 641
H IVH DLKP+N L+ ++ + D G+A + +P TT+ S + GTV Y+
Sbjct: 146 H---GIVHSDLKPANFLIVDGML-KLIDFGIANQM---QPDTTSVVKDSQV---GTVNYM 195
Query: 642 APVIIAARN 650
P I +
Sbjct: 196 PPEAIKDMS 204
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 71.0 bits (174), Expect = 7e-13
Identities = 37/183 (20%), Positives = 64/183 (34%), Gaps = 49/183 (26%)
Query: 487 KIREGGFNIVY----------NVAMKVANLKQK---EASRSFAAEFNALRNIRHRNLIKI 533
I GG +Y V +K L EA AE L + H ++++I
Sbjct: 87 CIAHGGLGWIYLALDRNVNGRPVVLKG--LVHSGDAEAQAMAMAERQFLAEVVHPSIVQI 144
Query: 534 I-------TICSSIDF------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR 580
+ + G K +L + + + +++ A+ YL
Sbjct: 145 FNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKL-----PVAEAIAYLLEILPALSYL- 198
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
H +V+ DLKP NI+L ++ + + DLG + + GT G+
Sbjct: 199 -H-SIGLVYNDLKPENIMLTEEQLK-LIDLGAVS----------RINSFGYLY--GTPGF 243
Query: 641 VAP 643
AP
Sbjct: 244 QAP 246
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 1e-12
Identities = 40/189 (21%), Positives = 76/189 (40%), Gaps = 42/189 (22%)
Query: 486 NKIREGGFNIVY--------NVAMKVANLKQ--KEASRSFAAEFNALRNIRHRNL----- 530
+I GG + V+ A+K NL++ + S+ E L ++ +
Sbjct: 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74
Query: 531 ---------IKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRH 581
I ++ C +ID + + ++ +R + ++ A+ +
Sbjct: 75 YDYEITDQYIYMVMECGNIDL----NSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQ 126
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYV 641
H IVH DLKP+N L+ ++ + D G+A + +P TT+ S + GTV Y+
Sbjct: 127 H---GIVHSDLKPANFLIVDGML-KLIDFGIANQM---QPDTTSVVKDSQV---GTVNYM 176
Query: 642 APVIIAARN 650
P I +
Sbjct: 177 PPEAIKDMS 185
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 44/215 (20%), Positives = 85/215 (39%), Gaps = 18/215 (8%)
Query: 129 SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188
++ + I N+ S + F +NL+ L L N L A F L + LE+L
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAA--AFTGL----ALLEQL 85
Query: 189 YFNRNGFEGVLPHSI-ANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMESSQLIG 246
+ N + + L + + + + + G+ R L L +L ++ + +
Sbjct: 86 DLSDNAQLRSVDPATFHGLGR-LHTLHLDRCGLQE-LGPGLFRGLAALQYLYLQDNA-LQ 142
Query: 247 TIPPLI-GETPNLQLLNIGGNHLQG---SILSSLGNLTLQTYLFNNLQGNIPS-SLANCK 301
+P + NL L + GN + L +L + L N ++ + +
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLD-RLLLHQNRVAHVHPHAFRDLG 201
Query: 302 SLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNN 336
L+ L + N L++ LP + L+ YL L++N
Sbjct: 202 RLMTLYLFANNLSA-LPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 5e-11
Identities = 49/238 (20%), Positives = 79/238 (33%), Gaps = 43/238 (18%)
Query: 43 SLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEI-----CSLFKLERLRI 97
+ +R+ L N S A+ + NL L SN L I L LE+L +
Sbjct: 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNV-----LARIDAAAFTGLALLEQLDL 87
Query: 98 DCGGRIDSL-----GHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRL 152
++ S+ L L L L L F L
Sbjct: 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGL-------------------FRGL 128
Query: 153 KNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQ 212
L +L L N L + + + L L+ + N V + L S + +
Sbjct: 129 AALQYLYLQDNALQALPD------DTFRDLGNLTHLFLHGNRISSVPERAFRGLHS-LDR 181
Query: 213 IAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP-LIGETPNLQLLNIGGNHLQ 269
+ + NR++ PH R+L L L + ++ L +P + LQ L + N
Sbjct: 182 LLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDNPWV 238
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 37/188 (19%), Positives = 63/188 (33%), Gaps = 20/188 (10%)
Query: 204 ANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLI-GETPNLQLLN 262
+ + ++I + NRIS R NL L + S+ + I L+ L+
Sbjct: 28 VGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNV-LARIDAAAFTGLALLEQLD 86
Query: 263 IGGN----HLQGSILSSLGNLTLQTYLFNNLQGNIPS-SLANCKSLLGLSVSHNKLTSTL 317
+ N + + LG L +L + +L L + N L + L
Sbjct: 87 LSDNAQLRSVDPATFHGLGRLH-TLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-L 144
Query: 318 PQQILSVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLH--------IPEYP-ENLSFF 367
P +L L N ++ S+P L +L RL + + +L
Sbjct: 145 PDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRL 203
Query: 368 ELLNLSYN 375
L L N
Sbjct: 204 MTLYLFAN 211
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 2e-12
Identities = 47/229 (20%), Positives = 87/229 (37%), Gaps = 44/229 (19%)
Query: 448 ARRKKPAHKDSNMLSMKQQFPMISHAELSKATNN--FSPANKIREGGFNIVY-------- 497
A + + H DS L S A + +S +I GG + V+
Sbjct: 22 AAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQ 81
Query: 498 NVAMKVANLKQ--KEASRSFAAEFNALRNIRHRNL--------------IKIITICSSID 541
A+K NL++ + S+ E L ++ + I ++ C +ID
Sbjct: 82 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID 141
Query: 542 FEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ 601
+ + ++ +R + ++ A+ + H IVH DLKP+N L+
Sbjct: 142 L----NSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD 190
Query: 602 DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN 650
++ + D G+A + +P TT+ S + G V Y+ P I +
Sbjct: 191 GML-KLIDFGIANQM---QPDTTSVVKDSQV---GAVNYMPPEAIKDMS 232
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 5e-12
Identities = 40/178 (22%), Positives = 66/178 (37%), Gaps = 32/178 (17%)
Query: 487 KIREGGFNIVY---------NVAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIIT 535
+I G F VY VA ++ K + F E L+ ++H N+++
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92
Query: 536 ICSSIDFEGFDFKAI----SNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
S + ++G L R + + + + +++L H P
Sbjct: 93 SWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFL-HTRTPP 151
Query: 587 IVHGDLKPSNILLD-QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
I+H DLK NI + +GDLGLA A A + I GT ++AP
Sbjct: 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLK-------RASFAKAVI---GTPEFMAP 199
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 6e-12
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 28/157 (17%)
Query: 486 NKIREGGFNIVY-------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICS 538
I +G F V VA+K +K +++F AE + + +RH NL++++ +
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 539 SIDFEGFDFKAI----SNGQ----LRLCN---LSLTQRVNIAIDVAFAIEYL-RHHCQPS 586
E + + G LR L + ++DV A+EYL ++
Sbjct: 257 E---EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF--- 310
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623
VH DL N+L+ +D V V D GL K +
Sbjct: 311 -VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 8e-12
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 38/170 (22%)
Query: 490 EGGFNIVY--------NVAMKVA--NLKQKEASRS----FAAEFNALRNIRHRNLIKIIT 535
EG F V ++KVA +K +S+ F +E +++ H N+I+++
Sbjct: 44 EGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLG 103
Query: 536 ICSSIDFEGFDFKAI-----SNGQLR-----------LCNLSLTQRVNIAIDVAFAIEYL 579
+C + +G + G L ++ L + +D+A +EYL
Sbjct: 104 VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL 163
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG---YEPGTTA 625
+ +H DL N +L D+ V D GL+K +Y Y G A
Sbjct: 164 SNRNF----LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIA 209
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 65.7 bits (160), Expect = 1e-11
Identities = 49/275 (17%), Positives = 80/275 (29%), Gaps = 24/275 (8%)
Query: 123 LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNC 182
L S +++ + G D + +L L + + + L +
Sbjct: 38 LYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARI---PSRILFGALRVLGI 94
Query: 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVN-----LNWL 237
S L+ L G P + + I N +T + L L L
Sbjct: 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVL 154
Query: 238 TMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSI----------LSSLGNLTLQTYLFN 287
++ + + + P L L++ N G +L L L+
Sbjct: 155 SIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME 214
Query: 288 NLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVG 347
G + A L GL +SHN L + L L L +P +
Sbjct: 215 TPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273
Query: 348 -NLKNLL----RLHIPEYPENLSFFELLNLSYNYF 377
L L RL P+ L L+L N F
Sbjct: 274 AKLSVLDLSYNRLDRNPSPDELPQVGNLSLKGNPF 308
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 1e-10
Identities = 46/278 (16%), Positives = 90/278 (32%), Gaps = 30/278 (10%)
Query: 16 LRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLS---SGSNLIKLS 72
R+ + V+ + I + +SL+RL + I S L +L+
Sbjct: 42 GRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELT 101
Query: 73 TDSNNLVRDILTEICSLF--KLERLRI---DCGGRIDSLGHLKSLLL-----LSLAFNQF 122
++ + + L L + R L L+ L LS+A
Sbjct: 102 LENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHS 161
Query: 123 LSLSNA-----SSLEMIEFSRNQFSGGVSVDFS----RLKNLSWLNLGVNNLGSGTANEL 173
L+ S +L ++ S N G + + + L L L + + +
Sbjct: 162 LNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGV-- 219
Query: 174 DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVN 233
L +L+ L + N + S + + + + +P G+
Sbjct: 220 -CSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQ-VPKGL--PAK 275
Query: 234 LNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGS 271
L+ L + ++L P E P + L++ GN S
Sbjct: 276 LSVLDLSYNRL--DRNPSPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 5e-05
Identities = 41/222 (18%), Positives = 76/222 (34%), Gaps = 27/222 (12%)
Query: 176 INLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHG---IRNLV 232
+ L LE L + + + S ++K++ + + RI S I G + +
Sbjct: 36 VELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGIS 95
Query: 233 NLNWLTMESSQLIGTIPPLIGE--TPNLQLLNIGGNHLQG--SILSSLGNLTLQTYLFNN 288
L LT+E+ ++ GT PP + E P+L +LN+ + L+ L +
Sbjct: 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLS 155
Query: 289 LQGN-----IPSSLANCKSLLGLSVSHNKLTS--TLPQQILSVTTLSL-YLELDNNLLNG 340
+ + +L L +S N L + + +L L L N +
Sbjct: 156 IAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME- 214
Query: 341 SLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVP 382
+ L L + L+LS+N
Sbjct: 215 TPSGVCSALAAARV--------QL---QGLDLSHNSLRDAAG 245
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 67.2 bits (163), Expect = 1e-11
Identities = 83/537 (15%), Positives = 168/537 (31%), Gaps = 138/537 (25%)
Query: 8 QYSKPLCILRTFLRYINLVNNGFNGEIPHQIGR---LISLERLILSNNSFSCAIPANLSS 64
+ +P + R ++ + + N + + R + L + +L L
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALL-----------ELRP 149
Query: 65 GSNLI--------KLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLS 116
N++ K + + ++ + FK+ L + +++ L+ L L
Sbjct: 150 AKNVLIDGVLGSGK-TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV--LEMLQKLL 206
Query: 117 LAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNL--------SWLNL-GVNNLGS 167
+ + S + I+ + + L+ L L L V N +
Sbjct: 207 YQIDPNWT-SRSDHSSNIKLRIHSIQ-------AELRRLLKSKPYENCLLVLLNVQN--A 256
Query: 168 GTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANL--SSTIKQIAMGSNRISSTIP 225
N + +C K+ L R + + ++T I++ + ++ T P
Sbjct: 257 KAWNAFNL-----SC-KI--LLTTRF-------KQVTDFLSAATTTHISLDHHSMTLT-P 300
Query: 226 HGIRNLVNLNWLTMESSQL---IGTIPPL----IGET----PNL--QLLNIGGNHLQGSI 272
+++L+ L +L L + T P I E+ ++ + L I
Sbjct: 301 DEVKSLL-LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII 359
Query: 273 LSSLGNLTLQTY--LFNNL-----QGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILS-V 324
SSL L Y +F+ L +IP+ L LS+ + + +++ +
Sbjct: 360 ESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL--------LSLIWFDVIKSDVMVVVNKL 411
Query: 325 TTLSLYLELDNNLLNGSLP----PEVGNLKNLLRLH---IPEY-------PENLSFFELL 370
SL +E S+P L+N LH + Y ++L L
Sbjct: 412 HKYSL-VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLD 470
Query: 371 NLSYNYFG------------SEVPTKGVF------NNKTRFSIIGNGKLCGGLDELH-LP 411
Y++ G + VF K R L+ L L
Sbjct: 471 QYFYSHIGHHLKNIEHPERMTLFRM--VFLDFRFLEQKIRHDSTAWNASGSILNTLQQLK 528
Query: 412 SCRYKGSIKPSITSLKVLIPVIVSCLILLVISFIFYARRKKPAHKDSNMLSMKQQFP 468
YK I + + L+ I + F+ K +++L +
Sbjct: 529 --FYKPYICDNDPKYERLVNAI--------LDFLPKIEENLICSKYTDLLRIALMAE 575
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 66.0 bits (161), Expect = 2e-11
Identities = 50/347 (14%), Positives = 114/347 (32%), Gaps = 35/347 (10%)
Query: 1 NSSNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCA--- 57
+ + ++ + + ++LV + + + +L L LSN +
Sbjct: 177 DLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQ 236
Query: 58 ----IPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLL 113
+ L+ G L+ ++ ++ F + L ++ +L
Sbjct: 237 RLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVE--------YL-NIYNLT 287
Query: 114 LLSLAFNQFLSLSNAS--SLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171
+ + + S + SL + F +S ++ L +++
Sbjct: 288 ITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV 347
Query: 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNL 231
+ S L F +N F + + L + + + N + +
Sbjct: 348 CPP------SPSSFTFLNFTQNVFTDSVFQGCSTLKRL-QTLILQRNGLKN-FFKVALMT 399
Query: 232 VNLNWLTMESSQL----IGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFN 287
N++ L L ++ +LN+ N L GS+ L L N
Sbjct: 400 KNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHN 459
Query: 288 NLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQIL----SVTTLSLY 330
N +IP + + ++L L+V+ N+L S +P + S+ + L+
Sbjct: 460 NRIMSIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLH 505
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 1e-10
Identities = 59/400 (14%), Positives = 120/400 (30%), Gaps = 62/400 (15%)
Query: 43 SLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEIC-SLFKLERLRIDCGG 101
+ L LS NS S ++S S L L N + R + + LE L +
Sbjct: 53 RTKALSLSQNSISELRMPDISFLSELRVLRLSHNRI-RSLDFHVFLFNQDLEYLDVSHN- 110
Query: 102 RIDSL--GHLKSLLLLSLAFNQFLSL------SNASSLEMIEFSRNQFSGGVSVDFSRLK 153
R+ ++ + SL L L+FN F L N + L + S +F +D +
Sbjct: 111 RLQNISCCPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFR---QLDLLPVA 167
Query: 154 NLS----WLNLGVNNLGSGTANELDFINL--------------------LTNCSKLERLY 189
+L L+L ++ G L N + L+
Sbjct: 168 HLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSN 227
Query: 190 FNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNW------LTMESSQ 243
N + + + + + + T L W L + +
Sbjct: 228 IKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLT 287
Query: 244 LIGTIPPLIG-----ETPNLQLLNIGGNHL---QGSILSSLGNLTLQTYLFNNLQGNIPS 295
+ I +L + ++ + ++ S + ++ ++
Sbjct: 288 ITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV 347
Query: 296 SLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRL 355
+ S L+ + N T ++ Q ++ L + N L + KN+ L
Sbjct: 348 CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGL--KNFFKVALMTKNMSSL 405
Query: 356 H--------IPEYPENLSFFELLNLSYNYFGSEVPTKGVF 387
+ + + + ++ S + T VF
Sbjct: 406 ETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF 445
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 3e-09
Identities = 60/369 (16%), Positives = 122/369 (33%), Gaps = 55/369 (14%)
Query: 49 LSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSL-- 106
SN + + +P +L LS N++ + +I L +L LR+ RI SL
Sbjct: 38 YSNRNLT-HVPKDLPP--RTKALSLSQNSISELRMPDISFLSELRVLRL-SHNRIRSLDF 93
Query: 107 ---GHLKSLLLLSLAFNQFLSLS--NASSLEMIEFSRNQF-SGGVSVDFSRLKNLSWLNL 160
+ L L ++ N+ ++S +SL ++ S N F V +F L L++L L
Sbjct: 94 HVFLFNQDLEYLDVSHNRLQNISCCPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGL 153
Query: 161 GVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRI 220
+ ++L L + E S+ ++T+ + N +
Sbjct: 154 SAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETE-----SLQIPNTTVLHLVFHPNSL 208
Query: 221 SSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLT 280
S + N L L + N++L + L + T
Sbjct: 209 FSVQVNMSVN--ALGHLQLS----------------NIKLNDENCQRLMTFLSELTRGPT 250
Query: 281 LQTYLFNNLQGNIPS-----SLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSL-YLELD 334
L +++ + + L++ + +T + ++ + + +L L ++
Sbjct: 251 LLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIE 310
Query: 335 NNLLNGSLPPEVGNLKNLLRLHI------------PEYPENLSFFELLNLSYNYFGSEVP 382
+ L + ++I P + S F LN + N F V
Sbjct: 311 HVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVF 370
Query: 383 TKGVFNNKT 391
+
Sbjct: 371 --QGCSTLK 377
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 1e-07
Identities = 47/271 (17%), Positives = 93/271 (34%), Gaps = 32/271 (11%)
Query: 1 NSSNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPA 60
S L Q+ P + + + + E + L SL + N F + A
Sbjct: 264 KCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEA 323
Query: 61 NLSSGSNLIKLSTDSNNLVRDILTEIC--SLFKLERLRIDCGGRIDSLGHLKSLLLLSLA 118
S + + ++ + +C S L + +
Sbjct: 324 LYSVFAEMNIKMLSISDT--PFIHMVCPPSPSSFTFL------------NFTQNVFTDSV 369
Query: 119 FNQFLSLSNASSLEMIEFSRNQFS--GGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176
F +L L+ + RN V++ + +L L++ +N+L S +
Sbjct: 370 FQGCSTLKR---LQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSH-----AYD 421
Query: 177 NLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNW 236
+ L + N G + L +K + + +NRI S IP + +L L
Sbjct: 422 RTCAWAESILVLNLSSNMLTGSVFRC---LPPKVKVLDLHNNRIMS-IPKDVTHLQALQE 477
Query: 237 LTMESSQLIGTIPPLIGET-PNLQLLNIGGN 266
L + S+QL ++P + + +LQ + + N
Sbjct: 478 LNVASNQL-KSVPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 8e-04
Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 27/181 (14%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
+ ++N N F + L L+ LIL N N+ L T +
Sbjct: 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETLDVS 411
Query: 78 LVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNAS---SLEMI 134
L L D + +S+L+L+L+ N ++++
Sbjct: 412 LN-----------SLNSHAYDR-----TCAWAESILVLNLSSNMLTGSVFRCLPPKVKVL 455
Query: 135 EFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNG 194
+ N+ + D + L+ L LN+ N L S D + L+ ++ + N
Sbjct: 456 DLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFD------RLTSLQYIWLHDNP 508
Query: 195 F 195
+
Sbjct: 509 W 509
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 2e-11
Identities = 38/200 (19%), Positives = 64/200 (32%), Gaps = 48/200 (24%)
Query: 476 SKATNNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIR 526
+ +F I GGF V+ +K ++A R E AL +
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLD 62
Query: 527 HRNLIK----IITICSSIDFEGFDFKAISNGQL----RLC-NLSLTQRV----------- 566
H N++ + + L C +L Q +
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 567 ---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623
+ + ++Y+ H +++ DLKPSNI L +GD GL L
Sbjct: 123 LALELFEQITKGVDYI--H-SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL------K 173
Query: 624 TAETASSSIGINGTVGYVAP 643
+ S GT+ Y++P
Sbjct: 174 NDGKRTRSK---GTLRYMSP 190
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 3e-11
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 32/153 (20%)
Query: 486 NKIREGGFNIVY-------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICS 538
I +G F V VA+K +K +++F AE + + +RH NL++++ +
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 539 S------IDFEGFDFKAISNGQLR--L-----CNLSLTQRVNIAIDVAFAIEYL-RHHCQ 584
I E ++ G L L L + ++DV A+EYL ++
Sbjct: 85 EEKGGLYIVTE-----YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF- 138
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
VH DL N+L+ +D V V D GL K
Sbjct: 139 ---VHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 4e-11
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 30/136 (22%)
Query: 499 VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF---------- 545
VA+K LK + + E + LR + H ++IK C
Sbjct: 63 VAVKA--LKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLG 120
Query: 546 ---DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSNILLDQ 601
D+ L ++ L Q + A + + YL H +H DL N+LLD
Sbjct: 121 SLRDY-------LPRHSIGLAQLLLFAQQICEGMAYLHAQHY----IHRDLAARNVLLDN 169
Query: 602 DVVTHVGDLGLAKFLY 617
D + +GD GLAK +
Sbjct: 170 DRLVKIGDFGLAKAVP 185
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 5e-11
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 42/193 (21%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMK---VANLKQKEASRSFAAEFNALRNIRH 527
NF KI G F+ VY VA+K + +L +A E + L+ + H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 528 RNLIK------------IIT-ICSSIDFEGFD-FKAISNGQLRLCNLSLTQRVNIAIDVA 573
N+IK I+ + + D + I + + + + + +
Sbjct: 92 PNVIKYYASFIEDNELNIVLELA-----DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC 146
Query: 574 FAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIG 633
A+E++ H + ++H D+KP+N+ + V +GDLGL +F + A S +
Sbjct: 147 SALEHM--HSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFF-----SSKTTAAHSLV- 197
Query: 634 INGTVGYVAPVII 646
GT Y++P I
Sbjct: 198 --GTPYYMSPERI 208
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 64.3 bits (156), Expect = 5e-11
Identities = 30/232 (12%), Positives = 59/232 (25%), Gaps = 63/232 (27%)
Query: 468 PMISHAELSKATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSF 515
+ LS+ +R G ++V+ + A+KV +
Sbjct: 50 ETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERL 109
Query: 516 AAEFNALRNIRHRNLIKIITICSSID----------------FEGFDFKAISNGQLRL-- 557
A + + + + G D A++N L +
Sbjct: 110 HEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPA 169
Query: 558 --CNL-----------------SLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598
+L + + + L + +VHG P N+
Sbjct: 170 ASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANL--QSK-GLVHGHFTPDNLF 226
Query: 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN 650
+ D +GD+ + GT +S V Y + A
Sbjct: 227 IMPDGRLMLGDVSALW-----KVGTRGPASS------VPVTYAPREFLNAST 267
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 5e-11
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 24/141 (17%)
Query: 490 EGGFNIVYNVAMKVANLKQKEASRS-FAAEFNALRNIRHRNLIKIITICSS----IDFEG 544
G +N VA+K LKQ S F AE N ++ ++H+ L+++ + + I E
Sbjct: 31 MGYYNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITE- 87
Query: 545 FDFKAISNGQL-------RLCNLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSN 596
+ NG L L++ + +++A +A + ++ + +H DL+ +N
Sbjct: 88 ----YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY----IHRDLRAAN 139
Query: 597 ILLDQDVVTHVGDLGLAKFLY 617
IL+ + + D GLA+ +
Sbjct: 140 ILVSDTLSCKIADFGLARLIE 160
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 6e-11
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 45/218 (20%)
Query: 453 PAHKDSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIVY---------NVAMKV 503
H S+ + + + ++ + KI EG F +K
Sbjct: 3 HHHHHSSGVDLGTE------NLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKE 56
Query: 504 ANL-----KQKEASRSFAAEFNALRNIRHRNLIKII-------TICSSIDF-EGFD-FKA 549
N+ K++E SR E L N++H N+++ ++ +D+ EG D FK
Sbjct: 57 INISRMSSKEREESRR---EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKR 113
Query: 550 ISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGD 609
I+ + L Q ++ + + A++++ H + I+H D+K NI L +D +GD
Sbjct: 114 INAQKGVL--FQEDQILDWFVQICLALKHV--HDR-KILHRDIKSQNIFLTKDGTVQLGD 168
Query: 610 LGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
G+A+ L +T E A + I GT Y++P I
Sbjct: 169 FGIARVL-----NSTVELARACI---GTPYYLSPEICE 198
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 63.9 bits (155), Expect = 6e-11
Identities = 32/227 (14%), Positives = 62/227 (27%), Gaps = 65/227 (28%)
Query: 488 IREGGFNIVY---------NVAMKVANLKQK---EASRSFAAEFNALRNIRH-------- 527
+ + + + V ++ A + E LR +R
Sbjct: 86 LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 145
Query: 528 --------RNLIKIITICSSIDFEGFD----------------------FKAISNGQLRL 557
+L+K I + + + +
Sbjct: 146 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 205
Query: 558 CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+L R+ + + V + L H +VH L+P +I+LDQ +
Sbjct: 206 KSLVHHARLQLTLQVIRLLASL--HHY-GLVHTYLRPVDIVLDQRGGVFLTGFEHLV--- 259
Query: 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFP 664
G +A + G+ P A R L + T+M+F
Sbjct: 260 --RDGASAVSP-------IGRGFAPPETTAERMLPFGQHHPTLMTFA 297
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 7e-11
Identities = 33/152 (21%), Positives = 67/152 (44%), Gaps = 30/152 (19%)
Query: 486 NKIREGGFNIVY-----NVAMKVA--NLKQKEASRS-FAAEFNALRNIRHRNLIKIITIC 537
+K+ G + VY ++ VA LK+ F E ++ I+H NL++++ +C
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 285
Query: 538 SS-----IDFEGFDFKAISNGQL-------RLCNLSLTQRVNIAIDVAFAIEYL-RHHCQ 584
+ I E ++ G L +S + +A ++ A+EYL + +
Sbjct: 286 TREPPFYIITE-----FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF- 339
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
+H +L N L+ ++ + V D GL++ +
Sbjct: 340 ---IHRNLAARNCLVGENHLVKVADFGLSRLM 368
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 7e-11
Identities = 41/228 (17%), Positives = 88/228 (38%), Gaps = 22/228 (9%)
Query: 171 NELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRN 230
++ + + + + ++ LS ++ ++ I S G++
Sbjct: 7 TPINQVFPDPGLANAVKQNLGKQSVTDLVS--QKELSG-VQNFNGDNSNIQSL--AGMQF 61
Query: 231 LVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQT-YLFNNL 289
NL L + +Q I + PL + L+ L++ N L L+ + + L +L NN
Sbjct: 62 FTNLKELHLSHNQ-ISDLSPL-KDLTKLEELSVNRNRL--KNLNGIPSACLSRLFLDNNE 117
Query: 290 QGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNL 349
+ SL + K+L LS+ +NKL S + + ++ L L+L N + + + L
Sbjct: 118 LRDT-DSLIHLKNLEILSIRNNKLKSIVM--LGFLSKLE-VLDLHGNEI--TNTGGLTRL 171
Query: 350 KNLLRLHIP------EYPENLSFFELLNLSYNYFGSEVPTKGVFNNKT 391
K + + + E + + N + G + + N +
Sbjct: 172 KKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWISPYYISNGGS 219
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 4e-08
Identities = 40/271 (14%), Positives = 100/271 (36%), Gaps = 49/271 (18%)
Query: 102 RIDSLGHLKSLLLLSLAFNQ---FLSLSNASSLEMIEFSRNQFSGGVSVD-FSRLKNLSW 157
++ L + + +L +S S ++ + S+ NL
Sbjct: 11 QVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQ---SLAGMQFFTNLKE 67
Query: 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSS-TIKQIAMG 216
L+L N + ++ L + +KLE L NRN + ++ + S + ++ +
Sbjct: 68 LHLSHNQISD--------LSPLKDLTKLEELSVNRNRLK-----NLNGIPSACLSRLFLD 114
Query: 217 SNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSL 276
+N + T + +L NL L++ +++ + +I L G L++L++ GN + ++
Sbjct: 115 NNELRDT--DSLIHLKNLEILSIRNNK-LKSIVML-GFLSKLEVLDLHGNEI-----TNT 165
Query: 277 GNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNN 336
L K + + ++ K + + + + + D
Sbjct: 166 ------------------GGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGR 207
Query: 337 LLNGSLPPEVGNLKNL-LRLHIPEYPENLSF 366
++ G+ + + +P Y + +S+
Sbjct: 208 WISPYYISNGGSYVDGCVLWELPVYTDEVSY 238
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 8e-04
Identities = 37/168 (22%), Positives = 64/168 (38%), Gaps = 22/168 (13%)
Query: 217 SNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSL 276
I+ P L N + Q + + E +Q N +++ L+ +
Sbjct: 6 PTPINQVFP--DPGLANAVKQNL-GKQSVTDLVSQ-KELSGVQNFNGDNSNI--QSLAGM 59
Query: 277 GNLT-LQT-YLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELD 334
T L+ +L +N ++ S L + L LSV+ N+L + ++ L L +
Sbjct: 60 QFFTNLKELHLSHNQISDL-SPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLD---N 115
Query: 335 NNLLNGSLPPEVGNLKNLLRLHIP-------EYPENLSFFELLNLSYN 375
N L + + +LKNL L I LS E+L+L N
Sbjct: 116 NELRDTD---SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGN 160
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 8e-11
Identities = 47/186 (25%), Positives = 70/186 (37%), Gaps = 45/186 (24%)
Query: 487 KIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKII 534
+ +G F V A+KV A+ K K+ S E L+ + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST-ILREVELLKKLDHPNIMKLF 87
Query: 535 TICSSIDF-----------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHC 583
I E FD + I S I V I Y+ H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFD-EIIKRK-----RFSEHDAARIIKQVFSGITYM--HK 139
Query: 584 QPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
+IVH DLKP NILL ++D + D GL+ ++ T + GT Y
Sbjct: 140 H-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC---FQQNTKMKD------RIGTAYY 189
Query: 641 VAPVII 646
+AP ++
Sbjct: 190 IAPEVL 195
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 8e-11
Identities = 35/165 (21%), Positives = 59/165 (35%), Gaps = 36/165 (21%)
Query: 490 EGGFNIVY-----------NVAMKVANLK----QKEASRSFAAEFNALRNIRHRNLIKII 534
G F V VA+K+ LK AE N ++ + + ++++I
Sbjct: 27 SGNFGTVKKGYYQMKKVVKTVAVKI--LKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 535 TICSS----IDFEGFDFKAISNGQLRLC-----NLSLTQRVNIAIDVAFAIEYL-RHHCQ 584
IC + + E G L ++ + + V+ ++YL +
Sbjct: 85 GICEAESWMLVME-----MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF- 138
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETAS 629
VH DL N+LL + D GL+K L E A+T
Sbjct: 139 ---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 180
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 9e-11
Identities = 45/189 (23%), Positives = 72/189 (38%), Gaps = 46/189 (24%)
Query: 487 KIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
+ G F+ V+ A+K S E L+ I+H N++ + I
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 538 SSIDF-----------EGFDFKAISNGQLRLCNLSLTQR--VNIAIDVAFAIEYLRHHCQ 584
S E FD + + G T++ + V A++YL H
Sbjct: 76 ESTTHYYLVMQLVSGGELFD-RILERG-------VYTEKDASLVIQQVLSAVKYL--HEN 125
Query: 585 PSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYV 641
IVH DLKP N+L +++ + D GL+K + G + GT GYV
Sbjct: 126 -GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME---QNGIMSTAC-------GTPGYV 174
Query: 642 APVIIAARN 650
AP ++A +
Sbjct: 175 APEVLAQKP 183
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 1e-10
Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 32/154 (20%)
Query: 486 NKIREGGFNIVY--------NVAMKVANLKQKEASRS-FAAEFNALRNIRHRNLIKIITI 536
K+ G F V+ VA+K +K S F AE N ++ ++H L+K+ +
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKT--MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 537 CSS----IDFEGFDFKAISNGQL-------RLCNLSLTQRVNIAIDVAFAIEYL-RHHCQ 584
+ I E ++ G L L + ++ + +A + ++ + +
Sbjct: 252 VTKEPIYIITE-----FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY- 305
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
+H DL+ +NIL+ +V + D GLA+ +
Sbjct: 306 ---IHRDLRAANILVSASLVCKIADFGLARVIED 336
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 1e-10
Identities = 47/259 (18%), Positives = 87/259 (33%), Gaps = 42/259 (16%)
Query: 129 SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188
+ + F + FS +L + + N++ ++ F NL KL +
Sbjct: 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADV-FSNL----PKLHEI 84
Query: 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI 248
+ N + P +NL NL +L + ++ I +
Sbjct: 85 RIEKA------------------------NNLLYINPEAFQNLPNLQYLLISNTG-IKHL 119
Query: 249 PPLI-GETPNLQLLNIGGN----HLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSL 303
P + + LL+I N ++ + L ++ +L N I +S N L
Sbjct: 120 PDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQL 179
Query: 304 LGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLHIPE--- 359
L++S N LP + + + L++ ++ SLP NLK L
Sbjct: 180 DELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNLKK 238
Query: 360 --YPENLSFFELLNLSYNY 376
E L +L+Y
Sbjct: 239 LPTLEKLVALMEASLTYPS 257
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 3e-07
Identities = 44/249 (17%), Positives = 75/249 (30%), Gaps = 26/249 (10%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSG-SNLIKLSTDSNNL 78
+ V LE++ +S N I A++ S L ++ + N
Sbjct: 32 AIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANN 91
Query: 79 VRDILTEICS-LFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFS 137
+ I E L L+ L I G + HL + + L + + ++ IE
Sbjct: 92 LLYINPEAFQNLPNLQYLLISNTG----IKHLPDVHKIHSLQKVLLDIQDNINIHTIE-- 145
Query: 138 RNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG 197
RN F G L L N + + E + N E
Sbjct: 146 RNSFVGLSF-------ESVILWLNKNGIQEIHN------SAFNGTQLDELNLSDNNNLEE 192
Query: 198 VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257
+ S + + RI S +G+ NL L S+ + +P L
Sbjct: 193 LPNDVFHGASG-PVILDISRTRIHSLPSYGLENLKKLRAR---STYNLKKLPTLEK-LVA 247
Query: 258 LQLLNIGGN 266
L ++
Sbjct: 248 LMEASLTYP 256
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 5e-06
Identities = 26/189 (13%), Positives = 63/189 (33%), Gaps = 19/189 (10%)
Query: 204 ANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLI-GETPNLQLLN 262
++L ++ ++ +L + + + ++ I + P L +
Sbjct: 26 SDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIR 85
Query: 263 IGGN----HLQGSILSSLGNLTLQTYLFNNLQGNIPS-SLANCKSLLGLSVSHNKLTSTL 317
I ++ +L NL + N ++P + + L + N T+
Sbjct: 86 IEKANNLLYINPEAFQNLPNLQ-YLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTI 144
Query: 318 PQQILS-VTTLSLYLELDNNLLNGSLPPEVGNLKNLLRL------HIPEYPEN----LSF 366
+ ++ S+ L L+ N + + N L L ++ E P + S
Sbjct: 145 ERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASG 203
Query: 367 FELLNLSYN 375
+L++S
Sbjct: 204 PVILDISRT 212
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 31/157 (19%)
Query: 486 NKIREGGFNIVY---------NVAMKVA--NLKQ---KEASRSFAAEFNALRNIRHRNLI 531
+ EG F V N +VA +LK E LRN+ H N++
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 532 KIITICSSIDFEG----FDFKAISNGQLR--L----CNLSLTQRVNIAIDVAFAIEYL-R 580
K IC+ G +F + +G L+ L ++L Q++ A+ + ++YL
Sbjct: 87 KYKGICTEDGGNGIKLIMEF--LPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
VH DL N+L++ + +GD GL K +
Sbjct: 145 RQY----VHRDLAARNVLVESEHQVKIGDFGLTKAIE 177
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 24/142 (16%)
Query: 490 EGGFNIVYNVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSS----IDFEG 544
G +N VA+K LK S +F E ++ +RH L+++ + S I E
Sbjct: 202 MGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE- 258
Query: 545 FDFKAISNGQL-------RLCNLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSN 596
+S G L L L Q V++A +A + Y+ R + VH DL+ +N
Sbjct: 259 ----YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY----VHRDLRAAN 310
Query: 597 ILLDQDVVTHVGDLGLAKFLYG 618
IL+ +++V V D GLA+ +
Sbjct: 311 ILVGENLVCKVADFGLARLIED 332
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 41/196 (20%), Positives = 72/196 (36%), Gaps = 52/196 (26%)
Query: 490 EGGFNIVY---------NVAMKV--------ANLKQKEASRSFAAEFNALRNIRHRNLIK 532
G V VA+++ + ++ + + + E L+ + H +IK
Sbjct: 145 SGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK 204
Query: 533 IITICSSIDF----------EGFDFKAISNGQLRLCNLSLTQRV--NIAIDVAFAIEYLR 580
I + D+ E FD K + N L + + A++YL
Sbjct: 205 IKNFFDAEDYYIVLELMEGGELFD-KVVGNK-------RLKEATCKLYFYQMLLAVQYL- 255
Query: 581 HHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGT 637
H I+H DLKP N+LL ++D + + D G +K L + T GT
Sbjct: 256 -HEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLC------GT 304
Query: 638 VGYVAPVIIAARNLEN 653
Y+AP ++ +
Sbjct: 305 PTYLAPEVLVSVGTAG 320
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 1e-10
Identities = 43/190 (22%), Positives = 72/190 (37%), Gaps = 46/190 (24%)
Query: 481 NFSPANKIREGGFNIVY--------NVAMKVANLKQKEASRSFAAEFNALRNI-RHRNLI 531
+F P + + G + +VA+K + + E LR H N+I
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADR---EVQLLRESDEHPNVI 81
Query: 532 KIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRV-------------NIAIDVAFAIEY 578
+ C+ + F+ I+ + LC +L + V + + +
Sbjct: 82 RYF--CT---EKDRQFQYIA---IELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAH 133
Query: 579 LRHHCQPSIVHGDLKPSNILL-----DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIG 633
L H +IVH DLKP NIL+ + + D GL K L G + + S +
Sbjct: 134 L--HSL-NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL---AVGRHSFSRRSGVP 187
Query: 634 INGTVGYVAP 643
GT G++AP
Sbjct: 188 --GTEGWIAP 195
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 2e-10
Identities = 27/141 (19%), Positives = 54/141 (38%), Gaps = 24/141 (17%)
Query: 490 EGGFNIVYNVAMKVANLKQKEASRS-FAAEFNALRNIRHRNLIKIITICSS-----IDFE 543
G + VA+K +++ S F E + + H L+++ +C + E
Sbjct: 26 LGYWLNKDKVAIKT--IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83
Query: 544 GFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSN 596
+ +G L + + + + +DV + YL +H DL N
Sbjct: 84 -----FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV----IHRDLAARN 134
Query: 597 ILLDQDVVTHVGDLGLAKFLY 617
L+ ++ V V D G+ +F+
Sbjct: 135 CLVGENQVIKVSDFGMTRFVL 155
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 2e-10
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 24/142 (16%)
Query: 490 EGGFNIVYNVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSS----IDFEG 544
G +N VA+K LK S +F E ++ +RH L+++ + S I E
Sbjct: 285 MGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE- 341
Query: 545 FDFKAISNGQL-------RLCNLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSN 596
+S G L L L Q V++A +A + Y+ R + VH DL+ +N
Sbjct: 342 ----YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY----VHRDLRAAN 393
Query: 597 ILLDQDVVTHVGDLGLAKFLYG 618
IL+ +++V V D GLA+ +
Sbjct: 394 ILVGENLVCKVADFGLARLIED 415
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 2e-10
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 24/141 (17%)
Query: 490 EGGFNIVYNVAMKVANLKQKEASRS-FAAEFNALRNIRHRNLIKIITICSS-----IDFE 543
G + Y+VA+K+ +K+ S F E + + H L+K +CS I E
Sbjct: 26 LGKWKGQYDVAVKM--IKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83
Query: 544 GFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSN 596
ISNG L L +Q + + DV + +L H +H DL N
Sbjct: 84 -----YISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF----IHRDLAARN 134
Query: 597 ILLDQDVVTHVGDLGLAKFLY 617
L+D+D+ V D G+ +++
Sbjct: 135 CLVDRDLCVKVSDFGMTRYVL 155
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 32/156 (20%), Positives = 57/156 (36%), Gaps = 35/156 (22%)
Query: 487 KIREGGFNIVY---------NVAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKII 534
+I G F V+ VA+K ++ + F E L+ H N++++I
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKS--CRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 535 TICSS-----IDFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYL-RHH 582
+C+ I E + G L + + + D A +EYL
Sbjct: 179 GVCTQKQPIYIVME-----LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
C +H DL N L+ + V + D G+++
Sbjct: 234 C----IHRDLAARNCLVTEKNVLKISDFGMSREEAD 265
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 38/177 (21%), Positives = 65/177 (36%), Gaps = 43/177 (24%)
Query: 486 NKIREGGFNIVY------------NVAMKVANLKQKEASRS----FAAEFNALRNIRHRN 529
+ +G F V VA+K+ LK + S F E ++ H +
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKM--LKADIIASSDIEEFLREAACMKEFDHPH 86
Query: 530 LIKIITICSSIDFEGFDFKAI------SNGQLR-----------LCNLSLTQRVNIAIDV 572
+ K++ + +G + +G L NL L V +D+
Sbjct: 87 VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI 146
Query: 573 AFAIEYL-RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG---YEPGTTA 625
A +EYL + +H DL N +L +D+ V D GL++ +Y Y G +
Sbjct: 147 ACGMEYLSSRNF----IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 38/170 (22%)
Query: 486 NKIREGGFNIVY-------------NVAMKVANLK---QKEASRSFAAEFNALRNIRHRN 529
+ G F VY VA+K L+ +A++ E + ++ + +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 78
Query: 530 LIKIITICSS----IDFEGFDFKAISNGQLRLC------NLSLTQRVNIAIDVAFAIEYL 579
+ +++ IC + + + + G L N+ +N + +A + YL
Sbjct: 79 VCRLLGICLTSTVQLITQ-----LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
VH DL N+L+ + D GLAK L E AE
Sbjct: 134 EDRRL----VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 2e-10
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 24/141 (17%)
Query: 490 EGGFNIVYNVAMKVANLKQKEASRS-FAAEFNALRNIRHRNLIKIITICSS-----IDFE 543
G + Y+VA+K+ +K+ S F E + N+ H L+++ +C+ I E
Sbjct: 42 YGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99
Query: 544 GFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSN 596
++NG L Q + + DV A+EYL +H DL N
Sbjct: 100 -----YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF----LHRDLAARN 150
Query: 597 ILLDQDVVTHVGDLGLAKFLY 617
L++ V V D GL++++
Sbjct: 151 CLVNDQGVVKVSDFGLSRYVL 171
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 3e-10
Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 36/166 (21%)
Query: 487 KIREGGFNIVY-----------NVAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIK 532
++ G F V +VA+KV LK +K + E + + + +++
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKV--LKQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 533 IITICSS----IDFEGFDFKAISNGQLRLC------NLSLTQRVNIAIDVAFAIEYL-RH 581
+I +C + + E G L + ++ + V+ ++YL
Sbjct: 75 LIGVCQAEALMLVME-----MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK 129
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
+ VH DL N+LL + D GL+K L + TA +
Sbjct: 130 NF----VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 171
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-10
Identities = 40/196 (20%), Positives = 72/196 (36%), Gaps = 52/196 (26%)
Query: 490 EGGFNIVY---------NVAMKV--------ANLKQKEASRSFAAEFNALRNIRHRNLIK 532
G V VA+K+ + ++ + + + E L+ + H +IK
Sbjct: 20 SGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK 79
Query: 533 IITICSSIDF----------EGFDFKAISNGQLRLCNLSLTQRV--NIAIDVAFAIEYLR 580
I + D+ E FD K + N L + + A++YL
Sbjct: 80 IKNFFDAEDYYIVLELMEGGELFD-KVVGNK-------RLKEATCKLYFYQMLLAVQYLH 131
Query: 581 HHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGT 637
+ I+H DLKP N+LL ++D + + D G +K + T + GT
Sbjct: 132 EN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRT------LCGT 179
Query: 638 VGYVAPVIIAARNLEN 653
Y+AP ++ +
Sbjct: 180 PTYLAPEVLVSVGTAG 195
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 3e-10
Identities = 48/210 (22%), Positives = 77/210 (36%), Gaps = 52/210 (24%)
Query: 479 TNNFSPANKIREGGFNIVY---------NVAMKVANLKQ---------KEASRSFAAEFN 520
N+ P + G ++V A+K+ ++ +E + E +
Sbjct: 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 521 ALRNI-RHRNLIKIITICSSIDF-----------EGFDFKAISNGQLRLCNLSLTQR--V 566
LR + H N+I++ + F E FD +L+++
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFD-YLTEKV-------TLSEKETR 127
Query: 567 NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626
I + I L H +IVH DLKP NILLD D+ + D G + L +PG
Sbjct: 128 KIMRALLEVICAL--HKL-NIVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLR 181
Query: 627 TASSSIGINGTVGYVAPVIIAARNLENREK 656
+ GT Y+AP II +N
Sbjct: 182 E------VCGTPSYLAPEIIECSMNDNHPG 205
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 3e-10
Identities = 36/175 (20%), Positives = 64/175 (36%), Gaps = 33/175 (18%)
Query: 468 PMISHAELSKATNNFSPANKIREGGFNIVY--------NVAMKVA--NLKQ---KEASRS 514
+ + I +G F +VY ++ A +L + + +
Sbjct: 9 AEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA 68
Query: 515 FAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI-----SNGQLR--L----CNLSLT 563
F E +R + H N++ +I I EG + +G L + N ++
Sbjct: 69 FLREGLLMRGLNHPNVLALIGIML--PPEGLPH--VLLPYMCHGDLLQFIRSPQRNPTVK 124
Query: 564 QRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
++ + VA +EYL VH DL N +LD+ V D GLA+ +
Sbjct: 125 DLISFGLQVARGMEYLAEQKF----VHRDLAARNCMLDESFTVKVADFGLARDIL 175
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-10
Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 30/156 (19%)
Query: 486 NKIREGGFNIVY---------NVAMKVA--NLKQ--KEASRSFAAEFNALRNIRHRNLIK 532
++ +G F V N VA L+ +E R F E L++++H N++K
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 533 IITICSSIDFEGFDFKAI----SNGQLR--L----CNLSLTQRVNIAIDVAFAIEYL-RH 581
+C S K I G LR L + + + + +EYL
Sbjct: 107 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 164
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+H DL NIL++ + +GD GL K L
Sbjct: 165 RY----IHRDLATRNILVENENRVKIGDFGLTKVLP 196
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 4e-10
Identities = 53/240 (22%), Positives = 90/240 (37%), Gaps = 53/240 (22%)
Query: 448 ARRKKPAHKDSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIVY---------N 498
A+ K + + + + P + A+ + + P + I G ++V
Sbjct: 64 AQPKGTENLYFQSMGPEDELPDWAAAK--EFYQKYDPKDVIGRGVSSVVRRCVHRATGHE 121
Query: 499 VAMKVANLKQKEASRSFAA--------EFNALRNIR-HRNLIKIITICSSIDF------- 542
A+K+ + + S E + LR + H ++I +I S F
Sbjct: 122 FAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDL 181
Query: 543 ----EGFDFKAISNGQLRLCNLSLTQR--VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSN 596
E FD +L+++ +I + A+ +L H +IVH DLKP N
Sbjct: 182 MRKGELFD-YLTEKV-------ALSEKETRSIMRSLLEAVSFL--HAN-NIVHRDLKPEN 230
Query: 597 ILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREK 656
ILLD ++ + D G + L EPG + GT GY+AP I+ E
Sbjct: 231 ILLDDNMQIRLSDFGFSCHL---EPGEKLRE------LCGTPGYLAPEILKCSMDETHPG 281
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 4e-10
Identities = 39/203 (19%), Positives = 66/203 (32%), Gaps = 43/203 (21%)
Query: 490 EGGFNIVY--------NVAMKVANLKQKEASRSFAAEFNALR-NIRHRNLIKIITICSSI 540
G V VA+K + + + E L + H N+I+ ++
Sbjct: 25 YGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM---EIKLLTESDDHPNVIRYYCSETTD 81
Query: 541 DF----------EGFDF-KAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
F D ++ + L +++ +A + +L H I+H
Sbjct: 82 RFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL--HSL-KIIH 138
Query: 590 GDLKPSNILLDQDVVTHVG-------------DLGLAKFLYGYEPGTTAETASSSIGING 636
DLKP NIL+ D GL K L + + S G
Sbjct: 139 RDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS----G 194
Query: 637 TVGYVAPVIIAARNLENREKRHT 659
T G+ AP ++ N ++R T
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLT 217
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 61.2 bits (148), Expect = 5e-10
Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 15/99 (15%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619
L R+ + + V + L HH +VH L+P +I+LDQ +
Sbjct: 203 LVHHARLQLTLQVIRLLASL-HHY--GLVHTYLRPVDIVLDQRGGVFLTGFEHLV----- 254
Query: 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRH 658
G ++ + G+ P + A R + +
Sbjct: 255 RDGARVVSS-------VSRGFEPPELEARRATISYHRDR 286
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 5e-10
Identities = 47/209 (22%), Positives = 70/209 (33%), Gaps = 48/209 (22%)
Query: 469 MISHAELSKATNNFSPANKIRE----------GGFNIVY---------NVAMKVAN-LKQ 508
M H S N I + G F V+ +K N +
Sbjct: 1 MHHHHHHSSGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS 60
Query: 509 KEASRSFAAEFNALRNIRHRNLIKIITICSSIDF-----------EGFDFKAISNGQLRL 557
+ AE L+++ H N+IKI + E + I + Q R
Sbjct: 61 QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLER--IVSAQARG 118
Query: 558 CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAK 614
LS + + A+ Y H Q +VH DLKP NIL + D GLA+
Sbjct: 119 KALSEGYVAELMKQMMNALAYF--HSQ-HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175
Query: 615 FLYGYEPGTTAETASSSIGINGTVGYVAP 643
++ + A+ GT Y+AP
Sbjct: 176 L---FKSDEHSTNAA------GTALYMAP 195
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 5e-10
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 21/132 (15%)
Query: 499 VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI----SN 552
VA+K L+ +E R F E L++++H N++K +C S K I
Sbjct: 42 VAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPY 97
Query: 553 GQLR--L----CNLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSNILLDQDVVT 605
G LR L + + + + +EYL +H DL NIL++ +
Sbjct: 98 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY----IHRDLATRNILVENENRV 153
Query: 606 HVGDLGLAKFLY 617
+GD GL K L
Sbjct: 154 KIGDFGLTKVLP 165
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 6e-10
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 30/152 (19%)
Query: 486 NKIREGGFNIVY-----NVAMKVA--NLKQKEASRS-FAAEFNALRNIRHRNLIKIITIC 537
+K+ G + VY ++ VA LK+ F E ++ I+H NL++++ +C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 538 SS-----IDFEGFDFKAISNGQL-------RLCNLSLTQRVNIAIDVAFAIEYL-RHHCQ 584
+ I E ++ G L +S + +A ++ A+EYL + +
Sbjct: 79 TREPPFYIITE-----FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF- 132
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
+H DL N L+ ++ + V D GL++ +
Sbjct: 133 ---IHRDLAARNCLVGENHLVKVADFGLSRLM 161
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 60.8 bits (147), Expect = 6e-10
Identities = 39/235 (16%), Positives = 70/235 (29%), Gaps = 45/235 (19%)
Query: 451 KKPAHKDSNMLSMKQQFPMIS-HAELSKATNNFSPANKIREGGFNIVY------------ 497
KP N + + P I E + + + EG F VY
Sbjct: 35 SKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKN 94
Query: 498 --NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL 555
+KV L+ +K + + + S G L
Sbjct: 95 KQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTL 154
Query: 556 R-LCN---------LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605
N + ++ A+ + + IE + H C+ I+HGD+KP N +L +
Sbjct: 155 LNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV-HDCE--IIHGDIKPDNFILGNGFLE 211
Query: 606 HVG-----------DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
DLG + + + GT T G+ +++ +
Sbjct: 212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK------CETSGFQCVEMLSNK 260
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 7e-10
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 35/178 (19%)
Query: 487 KIREGGFNIVY---------NVAMKV--ANLKQKEASRS-FAAEFNALRNIRHRNLIKII 534
K+ GG + VY VA+K ++KE + F E + + H+N++ +I
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 535 TICSSIDF--------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL-RHHCQP 585
+ D EG L S+ +N + I++
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYIESHGPL---SVDTAINFTNQILDGIKHAHDMR--- 131
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
IVH D+KP NIL+D + + D G+AK L + + + + + GTV Y +P
Sbjct: 132 -IVHRDIKPQNILIDSNKTLKIFDFGIAKAL-------SETSLTQTNHVLGTVQYFSP 181
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 8e-10
Identities = 43/188 (22%), Positives = 69/188 (36%), Gaps = 18/188 (9%)
Query: 129 SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188
++ S N L+ LNL L + + L L
Sbjct: 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK--------LQVDGTLPVLGTL 82
Query: 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMESSQLIGT 247
+ N + LP L + + + NR++S +P G R L L L ++ ++L T
Sbjct: 83 DLSHNQLQ-SLPLLGQTLPAL-TVLDVSFNRLTS-LPLGALRGLGELQELYLKGNEL-KT 138
Query: 248 IPP-LIGETPNLQLLNIGGNHLQ---GSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSL 303
+PP L+ TP L+ L++ N+L +L+ L NL L N IP L
Sbjct: 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLD-TLLLQENSLYTIPKGFFGSHLL 197
Query: 304 LGLSVSHN 311
+ N
Sbjct: 198 PFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 7e-07
Identities = 46/226 (20%), Positives = 76/226 (33%), Gaps = 54/226 (23%)
Query: 43 SLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGR 102
L LS N A L + L +L+ D L +
Sbjct: 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAEL----------------------TK 69
Query: 103 IDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGV 162
+ G L L L L+ NQ SL L L+ L++
Sbjct: 70 LQVDGTLPVLGTLDLSHNQLQSLPLL--------------------GQTLPALTVLDVSF 109
Query: 163 NNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSI-ANLSSTIKQIAMGSNRIS 221
N L S L +L+ LY N + LP + ++++++ +N ++
Sbjct: 110 NRLTSLPL------GALRGLGELQELYLKGNELK-TLPPGLLTPTPK-LEKLSLANNNLT 161
Query: 222 STIPHGI-RNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGN 266
+P G+ L NL+ L ++ + L TIP + L + GN
Sbjct: 162 E-LPAGLLNGLENLDTLLLQENSL-YTIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 3e-06
Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 21/186 (11%)
Query: 217 SNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG-SILSS 275
+++ +P + + L + + L + L LN+ L + +
Sbjct: 19 KRNLTA-LPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGT 75
Query: 276 LGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQIL-SVTTLSLYLELD 334
L L L +N ++P +L L VS N+LTS LP L + L L L
Sbjct: 76 LPVLG-TLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQ-ELYLK 132
Query: 335 NNLLNGSLPPEV-GNLKNLLRL-----HIPEYPE----NLSFFELLNLSYNYFGSEVPTK 384
N L +LPP + L +L ++ E P L + L L N + +P K
Sbjct: 133 GNELK-TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IP-K 189
Query: 385 GVFNNK 390
G F +
Sbjct: 190 GFFGSH 195
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 8e-10
Identities = 40/169 (23%), Positives = 63/169 (37%), Gaps = 35/169 (20%)
Query: 487 KIREGGFNIVY------------NVA---MKVANLKQKEASRSFAAEFNALRNIRHRNLI 531
K+ +G F +V +VA +K L Q EA F E NA+ ++ HRNLI
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 532 KIITICSS----IDFEGFDFKAISNGQLRLC------NLSLTQRVNIAIDVAFAIEYL-R 580
++ + + + E G L + L A+ VA + YL
Sbjct: 85 RLYGVVLTPPMKMVTE-----LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETAS 629
+H DL N+LL + +GD GL + L + +
Sbjct: 140 KRF----IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 184
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 8e-10
Identities = 42/218 (19%), Positives = 75/218 (34%), Gaps = 21/218 (9%)
Query: 129 SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188
S + ++ S N S F L L+L + E L++ L L
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEI---QTIEDGAYQSLSH---LSTL 81
Query: 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMESSQLIGT 247
N + + + + LSS +++ ++S + + +L L L + + +
Sbjct: 82 ILTGNPIQSLALGAFSGLSSL-QKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLI--Q 137
Query: 248 IPPLIG---ETPNLQLLNIGGNHLQG------SILSSLGNLTLQTYLFNNLQGNIPSSLA 298
L NL+ L++ N +Q +L + L L L N I
Sbjct: 138 SFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF 197
Query: 299 NCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNN 336
L L++ N+L S +P I T + L N
Sbjct: 198 KEIRLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 1e-08
Identities = 43/234 (18%), Positives = 75/234 (32%), Gaps = 38/234 (16%)
Query: 43 SLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGR 102
S + L LS N + S L L + I
Sbjct: 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE-----IQTI---------------E 68
Query: 103 IDSLGHLKSLLLLSLAFNQFLSLSNA-----SSLEMIEFSRNQFSGGVSVDFSRLKNLSW 157
+ L L L L N SL+ SSL+ + + + LK L
Sbjct: 69 DGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKE 128
Query: 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSI----ANLSSTIKQI 213
LN+ N + S +N + LE L + N + + + + +
Sbjct: 129 LNVAHNLIQS-----FKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSL 182
Query: 214 AMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLI-GETPNLQLLNIGGN 266
+ N ++ I G + L L ++++QL ++P I +LQ + + N
Sbjct: 183 DLSLNPMNF-IQPGAFKEIRLKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 9e-07
Identities = 38/192 (19%), Positives = 71/192 (36%), Gaps = 22/192 (11%)
Query: 204 ANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLI-GETPNLQLLN 262
NL + K + + N + + + L L + + I TI +L L
Sbjct: 24 DNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE-IQTIEDGAYQSLSHLSTLI 82
Query: 263 IGGNHLQ---GSILSSLGNLTLQTYLFNNLQGNIPSSLA-NCKSLLGLSVSHNKLTSTLP 318
+ GN +Q S L +L + ++ + + K+L L+V+HN + S
Sbjct: 83 LTGNPIQSLALGAFSGLSSLQ-KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKL 141
Query: 319 QQILSVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLHIPEYPENLSFFELLNLSYNYF 377
+ S T +L+L +N + S+ L + L++ L+LS N
Sbjct: 142 PEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLS-----------LDLSLNPM 189
Query: 378 GSEVPTKGVFNN 389
+ + G F
Sbjct: 190 -NFIQP-GAFKE 199
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 32/143 (22%), Positives = 52/143 (36%), Gaps = 31/143 (21%)
Query: 492 GFNIVYNVAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF---- 545
G N VA+K L+ + R F E L+ + ++K + +
Sbjct: 48 GDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVM 105
Query: 546 ---------DFKAISNGQLRLC--NLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLK 593
DF L+ L ++ + + + +EYL C VH DL
Sbjct: 106 EYLPSGCLRDF-------LQRHRARLDASRLLLYSSQICKGMEYLGSRRC----VHRDLA 154
Query: 594 PSNILLDQDVVTHVGDLGLAKFL 616
NIL++ + + D GLAK L
Sbjct: 155 ARNILVESEAHVKIADFGLAKLL 177
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 1e-09
Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 25/143 (17%)
Query: 489 REGGFNIVYNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKIITICSS----ID 541
G +I V +KV ++ K +S A+ ++ H ++++++ +C +
Sbjct: 35 IPEGESIKIPVCIKV--IEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLV 92
Query: 542 FEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKP 594
+ + G L L +N + +A + YL H VH +L
Sbjct: 93 TQ-----YLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM----VHRNLAA 143
Query: 595 SNILLDQDVVTHVGDLGLAKFLY 617
N+LL V D G+A L
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLP 166
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 1e-09
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSS 631
+ A++YL++ I+H D+KP NILLD+ H+ D +A L T T +
Sbjct: 124 LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML---PRETQITTMA-- 175
Query: 632 IGINGTVGYVAPVIIAARN 650
GT Y+AP + ++R
Sbjct: 176 ----GTKPYMAPEMFSSRK 190
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 1e-09
Identities = 42/194 (21%), Positives = 68/194 (35%), Gaps = 60/194 (30%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASRSFAA----EFNALRNIRHRNLIKIITI 536
EG + V A+K+ K+ + A E LR +RH+N+I+++ +
Sbjct: 15 EGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDV 74
Query: 537 ---------------CSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVA---F---- 574
C E D + + + A F
Sbjct: 75 LYNEEKQKMYMVMEYCVCGMQEMLDS--VPEKRFP-------------VCQAHGYFCQLI 119
Query: 575 -AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIG 633
+EYL H Q IVH D+KP N+LL + LG+A+ L+ + T T+
Sbjct: 120 DGLEYL--HSQ-GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ---- 172
Query: 634 INGTVGYVAPVIIA 647
G+ + P I
Sbjct: 173 --GSPAFQPPEIAN 184
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 36/181 (19%), Positives = 64/181 (35%), Gaps = 45/181 (24%)
Query: 491 GGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID 541
G F +V+ K N + E + + + H LI +
Sbjct: 62 GAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINL-------- 113
Query: 542 FEGFDFKA--------ISNGQL--RLC--NLSLTQR--VNIAIDVAFAIEYLRHHCQPSI 587
+ F+ K +S G+L R+ + +++ +N ++++ H SI
Sbjct: 114 HDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM--HEH-SI 170
Query: 588 VHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
VH D+KP NI+ + + V D GLA P + T + AP I
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATK---LNPDEIVKV------TTATAEFAAPEI 221
Query: 646 I 646
+
Sbjct: 222 V 222
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 1e-09
Identities = 28/166 (16%), Positives = 56/166 (33%), Gaps = 16/166 (9%)
Query: 152 LKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIK 211
K LG ++ + T +++ L + + I + IK
Sbjct: 22 FKAYLNGLLGQSSTANITEAQMN---------SLTYITLANINVTDLTG--IEYAHN-IK 69
Query: 212 QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGS 271
+ + + ++ P I L NL L + + P + +L LL+I + S
Sbjct: 70 DLTINNIHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDS 127
Query: 272 ILSSLGNLT-LQT-YLFNNLQGNIPSSLANCKSLLGLSVSHNKLTS 315
IL+ + L + + L N L L L++ + +
Sbjct: 128 ILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHD 173
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 5e-08
Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
++ + + N P I L +LERL + + NLS ++L L +
Sbjct: 68 IKDLTINNIHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHD 125
Query: 80 RDILTEICSLFKLERLRIDCGGRI---DSLGHLKSLLLLSLAFNQ---FLSLSNASSLEM 133
ILT+I +L K+ + + G I L L L L++ F+ + + + L
Sbjct: 126 DSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQ 185
Query: 134 IEFSRNQFSG 143
+ G
Sbjct: 186 LYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 2e-07
Identities = 21/175 (12%), Positives = 58/175 (33%), Gaps = 17/175 (9%)
Query: 75 SNNLVRDILTEICSLFKLERLRIDCGG--RIDSLGHLKSLLLLSLAFNQ---FLSLSNAS 129
+ +I + L + + + + + ++ L++ + +S S
Sbjct: 31 GQSSTANI--TEAQMNSLTYITLANINVTDLTGIEYAHNIKDLTINNIHATNYNPISGLS 88
Query: 130 SLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLY 189
+LE + + + S L +L+ L++ + + + K+ +
Sbjct: 89 NLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSI------LTKINTLPKVNSID 142
Query: 190 FNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQL 244
+ NG + + L +K + + + + I + LN L S +
Sbjct: 143 LSYNGAITDIM-PLKTLPE-LKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQTI 193
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 17/153 (11%), Positives = 55/153 (35%), Gaps = 14/153 (9%)
Query: 233 NLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLT-LQT-YLFNNLQ 290
T + +L + + ++ + L+ + ++ + N
Sbjct: 21 TFKAYLNGLLGQSSTANITEAQMNSLTYITLANINV--TDLTGIEYAHNIKDLTINNIHA 78
Query: 291 GNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLK 350
N + ++ +L L + +TS + +T+L+ L++ ++ + S+ ++ L
Sbjct: 79 TNY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT-LLDISHSAHDDSILTKINTLP 136
Query: 351 NLLRLHIPEYP--------ENLSFFELLNLSYN 375
+ + + + L + LN+ ++
Sbjct: 137 KVNSIDLSYNGAITDIMPLKTLPELKSLNIQFD 169
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 1e-09
Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 43/211 (20%)
Query: 464 KQQFPMISHAELSKATNNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRS 514
KQ +P + +++ ++ G F +V+ N A K + +
Sbjct: 141 KQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET 200
Query: 515 FAAEFNALRNIRHRNLIKIITICSSIDF-----------EGFDFKAISNGQLRLCNLSLT 563
E + +RH L+ + + E F+ A + ++
Sbjct: 201 VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-------KMS 253
Query: 564 QR--VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGY 619
+ V V + ++ H + VH DLKP NI+ + D GL
Sbjct: 254 EDEAVEYMRQVCKGLCHM--HEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH---L 307
Query: 620 EPGTTAETASSSIGINGTVGYVAPVIIAARN 650
+P + + GT + AP + +
Sbjct: 308 DPKQSVKV------TTGTAEFAAPEVAEGKP 332
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 2e-09
Identities = 25/153 (16%), Positives = 59/153 (38%), Gaps = 29/153 (18%)
Query: 485 ANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS----- 539
++ + G V +KV + + S SF + + + H++L+ +C
Sbjct: 29 RREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENI 88
Query: 540 IDFEGFDFKAISNGQLRLC------NLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDL 592
+ E + G L +++ ++ +A +A A+ +L + +HG++
Sbjct: 89 LVQE-----FVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTL----IHGNV 139
Query: 593 KPSNILLDQDVVTH--------VGDLGLAKFLY 617
NILL ++ + D G++ +
Sbjct: 140 CAKNILLIREEDRKTGNPPFIKLSDPGISITVL 172
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 2e-09
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 37/157 (23%)
Query: 487 KIREGGFNIVY------------NVAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLI 531
+ EG F VY NVA+K K+ + F +E ++N+ H +++
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKT--CKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 532 KIITICSS----IDFEGFDFKAISNGQLRLC------NLSLTQRVNIAIDVAFAIEYL-R 580
K+I I I E G+L +L + V ++ + A+ YL
Sbjct: 77 KLIGIIEEEPTWIIME-----LYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 131
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+C VH D+ NIL+ +GD GL++++
Sbjct: 132 INC----VHRDIAVRNILVASPECVKLGDFGLSRYIE 164
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 2e-09
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 33/155 (21%)
Query: 487 KIREGGFNIVY--------NVAMKVA--NLKQ---KEASRSFAAEFNALRNIRHRNLIKI 533
I EG F V+ N A+ VA K F E +R H +++K+
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 534 ITICSS----IDFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYL-RHH 582
I + + I E + G+L R +L L + A ++ A+ YL
Sbjct: 82 IGVITENPVWIIME-----LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 136
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
VH D+ N+L+ + +GD GL++++
Sbjct: 137 F----VHRDIAARNVLVSSNDCVKLGDFGLSRYME 167
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 25/151 (16%)
Query: 492 GFNIVYNVAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSS----IDFEG 544
G + VA+K L+ +A++ E + ++ + ++ +++ IC + + +
Sbjct: 40 GEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQ- 96
Query: 545 FDFKAISNGQLRLC------NLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSNI 597
+ G L N+ +N + +A + YL VH DL N+
Sbjct: 97 ----LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL----VHRDLAARNV 148
Query: 598 LLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
L+ + D GLAK L E AE
Sbjct: 149 LVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 2e-09
Identities = 51/215 (23%), Positives = 74/215 (34%), Gaps = 48/215 (22%)
Query: 462 SMKQQFPMISHAELSKATNNFSPA----NKIREGGFNIVY---------NVAMKV---AN 505
SM + +T FS + +G F V A+KV
Sbjct: 4 SMMDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 63
Query: 506 LKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF-----------EGFDFKAISNGQ 554
+KQK S E L+ + H N++K+ + E FD + IS
Sbjct: 64 VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD-EIISRK- 121
Query: 555 LRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLG 611
S I V I Y+ H IVH DLKP N+LL +D + D G
Sbjct: 122 ----RFSEVDAARIIRQVLSGITYM--HKN-KIVHRDLKPENLLLESKSKDANIRIIDFG 174
Query: 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
L+ +E + GT Y+AP ++
Sbjct: 175 LSTH---FEASKKMKD------KIGTAYYIAPEVL 200
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 38/181 (20%), Positives = 59/181 (32%), Gaps = 45/181 (24%)
Query: 491 GGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID 541
G + V A K E F E ++++ H N+I++
Sbjct: 20 GSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT 79
Query: 542 F-----------EGFDFKAISNGQLRLCNLSLTQR--VNIAIDVAFAIEYLRHHCQPSIV 588
E F+ + + + I DV A+ Y H ++
Sbjct: 80 DIYLVMELCTGGELFE-RVVHKR-------VFRESDAARIMKDVLSAVAYC--HKL-NVA 128
Query: 589 HGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
H DLKP N L D + D GLA ++PG T GT YV+P +
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLAAR---FKPGKMMRT------KVGTPYYVSPQV 179
Query: 646 I 646
+
Sbjct: 180 L 180
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 43/197 (21%), Positives = 70/197 (35%), Gaps = 47/197 (23%)
Query: 476 SKATNNFSPANKIREGGFNIVYNV---------AMKV---ANLKQKEASRSFAAEFNALR 523
S +F +++ G + V+ V A+K K+ +R A E +
Sbjct: 53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLA-EVGSHE 111
Query: 524 NI-RHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRV-------------NIA 569
+ +H +++ + ++ I Q LC SL Q
Sbjct: 112 KVGQHPCCVRL--------EQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYL 163
Query: 570 IDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETAS 629
D A+ +L H Q +VH D+KP+NI L +GD GL L TA
Sbjct: 164 RDTLLALAHL--HSQ-GLVHLDVKPANIFLGPRGRCKLGDFGLLVEL------GTAGAGE 214
Query: 630 SSIGINGTVGYVAPVII 646
G Y+AP ++
Sbjct: 215 VQE---GDPRYMAPELL 228
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 2e-09
Identities = 34/158 (21%), Positives = 58/158 (36%), Gaps = 35/158 (22%)
Query: 486 NKIREGGFNIVY--------NVAMKVA--NLKQ---KEASRSFAAEFNALRNIRHRNLIK 532
I G F VY + A +L + F E +++ H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 533 IITICSSID------FEGFDFKAISNGQLR--L----CNLSLTQRVNIAIDVAFAIEYL- 579
++ IC + + +G LR + N ++ + + VA ++YL
Sbjct: 91 LLGICLRSEGSPLVVLP-----YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 145
Query: 580 RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
VH DL N +LD+ V D GLA+ +Y
Sbjct: 146 SKKF----VHRDLAARNCMLDEKFTVKVADFGLARDMY 179
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 59.6 bits (144), Expect = 2e-09
Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 36/168 (21%)
Query: 487 KIREGGFNIVY-----------NVAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIK 532
++ G F V +VA+KV LK +K + E + + + +++
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKV--LKQGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 533 IITICSS----IDFEGFDFKAISNGQLRLC------NLSLTQRVNIAIDVAFAIEYL-RH 581
+I +C + + E G L + ++ + V+ ++YL
Sbjct: 401 LIGVCQAEALMLVME-----MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK 455
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETAS 629
+ VH +L N+LL + D GL+K L + TA +A
Sbjct: 456 NF----VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 33/195 (16%), Positives = 64/195 (32%), Gaps = 49/195 (25%)
Query: 490 EGGFNIVY-------NVAMKVANLKQKEASRSFAA-----------------EFNALRNI 525
+G FN + A+K E R F E + +I
Sbjct: 41 QGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI 100
Query: 526 RHRNLIKIITICSS-------IDF----EGFDF--KAISNGQLRLCNLSLTQRVNIAIDV 572
++ + I ++ ++ F + C + + I V
Sbjct: 101 KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSV 160
Query: 573 AFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSI 632
+ Y+ H + +I H D+KPSNIL+D++ + D G ++ Y + +
Sbjct: 161 LNSFSYI--HNEKNICHRDVKPSNILMDKNGRVKLSDFGESE----YMVDKKIKGSR--- 211
Query: 633 GINGTVGYVAPVIIA 647
GT ++ P +
Sbjct: 212 ---GTYEFMPPEFFS 223
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 4e-09
Identities = 34/184 (18%), Positives = 75/184 (40%), Gaps = 41/184 (22%)
Query: 487 KIREGGFNIVY---------NVAMKV--ANLKQKEASRS-FAAEFNALRNIRHRNLIKI- 533
+ GG + V+ +VA+KV A+L + + F E + H ++ +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 534 -----ITICSSIDF------EGFDFKAI--SNGQLRLCNLSLTQRVNIAIDVAFAIEYL- 579
T + + +G + I + G + + + + + D A+ +
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-----TPKRAIEVIADACQALNFSH 133
Query: 580 RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
++ I+H D+KP+NI++ V D G+A+ + + T +++ + GT
Sbjct: 134 QNG----IIHRDVKPANIMISATNAVKVMDFGIARAI---ADSGNSVTQTAA--VIGTAQ 184
Query: 640 YVAP 643
Y++P
Sbjct: 185 YLSP 188
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 5e-09
Identities = 39/188 (20%), Positives = 70/188 (37%), Gaps = 45/188 (23%)
Query: 481 NFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLI 531
S + G F V+ +A K+ + + E + + + H NLI
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149
Query: 532 KIITICSSIDFEGFDFKA--------ISNGQL--RLC--NLSLTQR--VNIAIDVAFAIE 577
++ ++ F+ K + G+L R+ + +LT+ + + I
Sbjct: 150 QL--------YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIR 201
Query: 578 YLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETASSSIGIN 635
++ H I+H DLKP NIL + D GLA+ Y+P +
Sbjct: 202 HM--HQM-YILHLDLKPENILCVNRDAKQIKIIDFGLARR---YKPREKLKV------NF 249
Query: 636 GTVGYVAP 643
GT ++AP
Sbjct: 250 GTPEFLAP 257
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 5e-09
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 12/85 (14%)
Query: 560 LSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
L+ + V I + A++ H D+KP NIL+ D ++ D G+A
Sbjct: 131 LAPPRAVAIVRQIGSALDAAHAAG----ATHRDVKPENILVSADDFAYLVDFGIASAT-- 184
Query: 619 YEPGTTAETASSSIGINGTVGYVAP 643
T + GT+ Y+AP
Sbjct: 185 ---TDEKLTQLGN--TVGTLYYMAP 204
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 6e-09
Identities = 36/189 (19%), Positives = 65/189 (34%), Gaps = 37/189 (19%)
Query: 487 KIREGGFNIVY---------NVAMKV---ANLKQKEASR--SFAAEFNALRNIRHRNLIK 532
I +G F++V A+K+ A E + ++H ++++
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 533 IITICSSIDF--------EGFD-FKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHC 583
++ SS +G D I S + + A+ Y H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC--HD 148
Query: 584 QPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
+I+H D+KP +LL + +G G+A L E G A GT +
Sbjct: 149 N-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGG------RVGTPHF 199
Query: 641 VAPVIIAAR 649
+AP ++
Sbjct: 200 MAPEVVKRE 208
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 6e-09
Identities = 37/159 (23%), Positives = 58/159 (36%), Gaps = 38/159 (23%)
Query: 486 NKIREGGFNIVY------------NVAMKVANLKQ---KEASRSFAAEFNALRNIRHRNL 530
I G V VA+K LK + R F +E + + H N+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKA--LKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 531 IKIITICSS-----IDFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYL 579
I++ + + I E + NG L ++ Q V + V + YL
Sbjct: 113 IRLEGVVTRGRLAMIVTE-----YMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
VH DL N+L+D ++V V D GL++ L
Sbjct: 168 SDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 9e-09
Identities = 33/158 (20%), Positives = 58/158 (36%), Gaps = 35/158 (22%)
Query: 486 NKIREGGFNIVY--------NVAMKVA--NLKQ---KEASRSFAAEFNALRNIRHRNLIK 532
I G F VY + A +L + F E +++ H N++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 533 IITICSSID------FEGFDFKAISNGQLR--L----CNLSLTQRVNIAIDVAFAIEYL- 579
++ IC + + +G LR + N ++ + + VA +++L
Sbjct: 155 LLGICLRSEGSPLVVLP-----YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 209
Query: 580 RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
VH DL N +LD+ V D GLA+ +Y
Sbjct: 210 SKKF----VHRDLAARNCMLDEKFTVKVADFGLARDMY 243
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 57.5 bits (138), Expect = 1e-08
Identities = 38/269 (14%), Positives = 94/269 (34%), Gaps = 13/269 (4%)
Query: 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLS 63
++P + L +L + S + +L + C + +
Sbjct: 288 RTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECW-CRDSA 346
Query: 64 SGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCG-GRIDSLGHLKSLLLLSLAFNQF 122
+ L + + +E+ S +L+ L + + + +++L L
Sbjct: 347 TDEQLFRCELSVEKSTV-LQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETL 405
Query: 123 LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNC 182
S +++ + + + + + + + ++ V +L +L + L
Sbjct: 406 QYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAH---KDLTVLCHLEQL 462
Query: 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS 242
+ L + N LP ++A L ++ + N + + G+ NL L L + ++
Sbjct: 463 LLVTHLDLSHNRLR-ALPPALAALRC-LEVLQASDNALENV--DGVANLPRLQELLLCNN 518
Query: 243 QLIGTIPPL--IGETPNLQLLNIGGNHLQ 269
+ + + + P L LLN+ GN L
Sbjct: 519 R-LQQSAAIQPLVSCPRLVLLNLQGNSLC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 53.6 bits (128), Expect = 1e-07
Identities = 35/249 (14%), Positives = 75/249 (30%), Gaps = 23/249 (9%)
Query: 75 SNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLS----LSNASS 130
+ R I T S + L+ + L L+ + L +
Sbjct: 314 PQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVEKSTVLQSELESCKE 373
Query: 131 LEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYF 190
L+ +E + + L L + + + L ++ + +
Sbjct: 374 LQELEPENKWCLLTIILLMRALDPLLYEKETLQYF-----STLKAVDPMRAAYLDDLRSK 428
Query: 191 NRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP 250
+ + + + ++ + L+ + L + S + +PP
Sbjct: 429 FLLENSVLKMEYADV-----RVLHLAHKDLTV--LCHLEQLLLVTHLDL-SHNRLRALPP 480
Query: 251 LIGETPNLQLLNIGGNHLQGSILSSLGNLT-LQT-YLFNNLQGNIPS--SLANCKSLLGL 306
+ L++L N L + + NL LQ L NN + L +C L+ L
Sbjct: 481 ALAALRCLEVLQASDNAL--ENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538
Query: 307 SVSHNKLTS 315
++ N L
Sbjct: 539 NLQGNSLCQ 547
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 52.1 bits (124), Expect = 5e-07
Identities = 38/222 (17%), Positives = 77/222 (34%), Gaps = 33/222 (14%)
Query: 146 SVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIAN 205
D + + L L V + L +C +L+ L L I
Sbjct: 342 CRDSATDEQLFRCELSVEKSTVLQ-------SELESCKELQELEPENKWC---LLTIILL 391
Query: 206 LSSTIKQIAMGSNRISSTIPHGIRNLVNLNWL-----TMESSQLIGTIPPLIGETPNLQL 260
+ + + + + L ++ + S+ + L E ++++
Sbjct: 392 MRA-LDPLLYEKETLQY-----FSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRV 445
Query: 261 LNIGGNHLQGSILSSLGNLTLQTYLFNNLQGN----IPSSLANCKSLLGLSVSHNKLTST 316
L++ L ++L L L L T+L +L N +P +LA + L L S N L +
Sbjct: 446 LHLAHKDL--TVLCHLEQLLLVTHL--DLSHNRLRALPPALAALRCLEVLQASDNALENV 501
Query: 317 LP-QQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI 357
+ + L L +N L + + + L+ L++
Sbjct: 502 DGVANLPRLQELLLC---NNRLQQSAAIQPLVSCPRLVLLNL 540
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 51.3 bits (122), Expect = 8e-07
Identities = 33/201 (16%), Positives = 66/201 (32%), Gaps = 20/201 (9%)
Query: 1 NSSNNLLQYSKPLCILRTFLRYINLVNNGF---NGEIPHQIGRLISLERLILSNNSFSCA 57
S + L+ + N + + L+ + + ++
Sbjct: 355 ELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAV 414
Query: 58 IPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSL 117
P + +L N++++ ++ L L + + L L + L L
Sbjct: 415 DPMRAAYLDDLRSKFLLENSVLKMEYADVRVLH-LAHKDLT---VLCHLEQLLLVTHLDL 470
Query: 118 AFNQFLS----LSNASSLEMIEFSRNQFSGGVSVD-FSRLKNLSWLNLGVNNLGSGTANE 172
+ N+ + L+ LE+++ S N +VD + L L L L N L +
Sbjct: 471 SHNRLRALPPALAALRCLEVLQASDNALE---NVDGVANLPRLQELLLCNNRL-----QQ 522
Query: 173 LDFINLLTNCSKLERLYFNRN 193
I L +C +L L N
Sbjct: 523 SAAIQPLVSCPRLVLLNLQGN 543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 47.8 bits (113), Expect = 9e-06
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 31/148 (20%)
Query: 1 NSSNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPA 60
+ + L + L + +R ++L + + H + +L+ + L LS+N +P
Sbjct: 424 DLRSKFLLENSVLKMEYADVRVLHLAHKDLT-VLCH-LEQLLLVTHLDLSHNRLRA-LPP 480
Query: 61 NLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFN 120
L++ L L N L +D + +L L L L N
Sbjct: 481 ALAALRCLEVLQASDNALEN----------------------VDGVANLPRLQELLLCNN 518
Query: 121 Q------FLSLSNASSLEMIEFSRNQFS 142
+ L + L ++ N
Sbjct: 519 RLQQSAAIQPLVSCPRLVLLNLQGNSLC 546
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 39/176 (22%), Positives = 66/176 (37%), Gaps = 45/176 (25%)
Query: 490 EGGFNIVY----------NVAMKVANLKQ-KEASRS----FAAEFNALRNIRHRNLIKII 534
EG F V+ M VA +K K+ + + F E L N++H +++K
Sbjct: 25 EGAFGKVFLAECYNLSPTKDKMLVA-VKALKDPTLAARKDFQREAELLTNLQHEHIVKFY 83
Query: 535 TICS-----SIDFE----------------GFDFKAISNGQLRLCNLSLTQRVNIAIDVA 573
+C + FE + L L+Q ++IA +A
Sbjct: 84 GVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIA 143
Query: 574 FAIEYL-RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG---YEPGTTA 625
+ YL H VH DL N L+ +++ +GD G+++ +Y Y G
Sbjct: 144 SGMVYLASQHF----VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 48/189 (25%), Positives = 71/189 (37%), Gaps = 47/189 (24%)
Query: 487 KIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
++ G +IVY A+KV LK+ + E L + H N+IK+ I
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKV--LKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIF 117
Query: 538 SSIDF-----------EGFDFKAISNGQLRLCNLSLTQR--VNIAIDVAFAIEYLRHHCQ 584
+ E FD + + G ++R + + A+ YL H
Sbjct: 118 ETPTEISLVLELVTGGELFD-RIVEKG-------YYSERDAADAVKQILEAVAYL--HEN 167
Query: 585 PSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYV 641
IVH DLKP N+L D + D GL+K + E +T GT GY
Sbjct: 168 -GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVC------GTPGYC 217
Query: 642 APVIIAARN 650
AP I+
Sbjct: 218 APEILRGCA 226
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 38/159 (23%)
Query: 486 NKIREGGFNIVY------------NVAMKVANLKQ---KEASRSFAAEFNALRNIRHRNL 530
+ G F V +VA+K LK ++ R F E + + H N+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKT--LKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 531 IKIITICSS-----IDFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYL 579
I++ + + I E + NG L ++ Q V + +A ++YL
Sbjct: 109 IRLEGVVTKSKPVMIVTE-----YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
VH DL NIL++ ++V V D GL + L
Sbjct: 164 SDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLE 198
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 2e-08
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGI 634
A+E+L H + ++H DLKPSNI D V VGD GL + E T T +
Sbjct: 176 AVEFL--HSK-GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAT 232
Query: 635 N----GTVGYVAP 643
+ GT Y++P
Sbjct: 233 HTGQVGTKLYMSP 245
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 2e-08
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 23/90 (25%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
+ +E++ + +V+ DLKP+NILLD+ HV DLGLA +P +
Sbjct: 301 IILGLEHMHNR---FVVYRDLKPANILLDEH--GHVRISDLGLACDFSKKKPHASV---- 351
Query: 630 SSIGINGTVGYVAPVIIAARNLENREKRHT 659
GT GY+AP ++ + +
Sbjct: 352 ------GTHGYMAPEVL------QKGVAYD 369
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 52/211 (24%), Positives = 71/211 (33%), Gaps = 55/211 (26%)
Query: 469 MISHAELSKATNNFSPANKIRE----------GGFNIVY---------NVAMKV---ANL 506
M H S N E G F V A+KV A+
Sbjct: 1 MHHHHHHSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA 60
Query: 507 KQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF--------EG---FDFKAISNGQL 555
K K+ S E L+ + H N++K+ I G FD + I
Sbjct: 61 KNKDTST-ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD-EIIKRK-- 116
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGL 612
S I V I Y+ H +IVH DLKP NILL ++D + D GL
Sbjct: 117 ---RFSEHDAARIIKQVFSGITYM--HKH-NIVHRDLKPENILLESKEKDCDIKIIDFGL 170
Query: 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
+ ++ T + GT Y+AP
Sbjct: 171 STC---FQQNTKMKDRI------GTAYYIAP 192
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 2e-08
Identities = 34/186 (18%), Positives = 64/186 (34%), Gaps = 49/186 (26%)
Query: 490 EGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
+G F++V A K+ L ++ + E R ++H N++++
Sbjct: 16 KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQHPNIVRLHDSI 74
Query: 538 SSIDF-----------EGFDFKAISNGQLRLCNLSLTQRV--NIAIDVAFAIEYLRHHCQ 584
F E F+ ++ ++ + + +I Y H
Sbjct: 75 QEESFHYLVFDLVTGGELFE-DIVARE-------FYSEADASHCIQQILESIAYC--HSN 124
Query: 585 PSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYV 641
IVH +LKP N+LL + + D GLA + GT GY+
Sbjct: 125 -GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHG------FAGTPGYL 174
Query: 642 APVIIA 647
+P ++
Sbjct: 175 SPEVLK 180
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 40/159 (25%), Positives = 62/159 (38%), Gaps = 39/159 (24%)
Query: 487 KIREGGFNIVY-------------NVAMKVANLKQ---KEASRSFAAEFNALRNIRHRNL 530
I G F VY VA+K LK ++ F E + H N+
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKT--LKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 531 IKIITICSS-----IDFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYL 579
I++ + S I E + NG L + S+ Q V + +A ++YL
Sbjct: 109 IRLEGVISKYKPMMIITE-----YMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+ VH DL NIL++ ++V V D GL++ L
Sbjct: 164 ANMNY----VHRDLAARNILVNSNLVCKVSDFGLSRVLE 198
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 49/225 (21%)
Query: 453 PAHKDSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIVY---------NVAMKV 503
P + +K ++N+ ++ +G F++V A K+
Sbjct: 2 PHMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61
Query: 504 ---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF-----------EGFDFKA 549
L ++ + E R ++H N++++ F E F+
Sbjct: 62 INTKKLSARDFQK-LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE-DI 119
Query: 550 ISNGQLRLCNLSLTQRV--NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVV 604
++ ++ + + +I Y H IVH +LKP N+LL +
Sbjct: 120 VARE-------FYSEADASHCIQQILESIAYC--HSN-GIVHRNLKPENLLLASKAKGAA 169
Query: 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ D GLA + + GT GY++P ++
Sbjct: 170 VKLADFGLAIEV---NDSEAWHGFA------GTPGYLSPEVLKKD 205
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 4e-08
Identities = 59/358 (16%), Positives = 115/358 (32%), Gaps = 67/358 (18%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLI-----SLERLILSNNSFS----CAIPANLSSGSNLIK 70
L +NL +N H + + + +++L L N + + + L + L +
Sbjct: 58 LAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQE 117
Query: 71 LSTDSNNLVRDILTEICSLF-----KLERLRI--------DCGGRIDSLGHLKSLLLLSL 117
L N L L +C +LE+L++ C L L++
Sbjct: 118 LHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTV 177
Query: 118 AFNQFLS----------LSNASSLEMIEFSRNQFSGGVSVDFSRL----KNLSWLNLGVN 163
+ N + LE ++ + D + +L L LG N
Sbjct: 178 SNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSN 237
Query: 164 NLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANL---SSTIKQIAMGSNRI 220
LG EL L + L L+ G + + ++K++++ N +
Sbjct: 238 KLGDVGMAELCPGLLHPSSR-LRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296
Query: 221 --------SSTIPHGIRNLVNL----NWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL 268
T+ L +L T + ++ + L L I N L
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS---VLAQNRFLLELQISNNRL 353
Query: 269 QGSILSSLG------NLTLQT-YLFNNLQGN-----IPSSLANCKSLLGLSVSHNKLT 314
+ + + L L+ +L + + + ++L SL L +S+N L
Sbjct: 354 EDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 38/273 (13%), Positives = 82/273 (30%), Gaps = 54/273 (19%)
Query: 129 SSLEMIEFSRNQFS-GGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLER 187
++ ++ + S + L+ + L L ++ + L L
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDI--SSALRVNPALAE 60
Query: 188 LYFNRNGF--EGV--LPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQ 243
L N GV + + S I+++++ + ++
Sbjct: 61 LNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTG-----------------AGCG 103
Query: 244 LIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLG------NLTLQT-YLFNNLQGN---- 292
++ + + P LQ L++ N L + L L L+ L
Sbjct: 104 VLSS---TLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE 160
Query: 293 -IPSSLANCKSLLGLSVSHNKLTST---LPQQILSVTTLSL-YLELDNNLLNGSLPPEVG 347
+ S L L+VS+N + + Q L + L L+L++ +
Sbjct: 161 PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVT---SDNCR 217
Query: 348 NLKNLLRLHIPEYPENLSFFELLNLSYNYFGSE 380
+L ++ + + L L N G
Sbjct: 218 DLCGIVA--------SKASLRELALGSNKLGDV 242
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 55.6 bits (134), Expect = 4e-08
Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 33/155 (21%)
Query: 487 KIREGGFNIVY--------NVAMKVA--NLKQ---KEASRSFAAEFNALRNIRHRNLIKI 533
I EG F V+ N AM VA K F E +R H +++K+
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 534 ITICSS----IDFEGFDFKAISNGQLRL------CNLSLTQRVNIAIDVAFAIEYL-RHH 582
I + + I E + G+LR +L L + A ++ A+ YL
Sbjct: 457 IGVITENPVWIIME-----LCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
VH D+ N+L+ + +GD GL++++
Sbjct: 512 F----VHRDIAARNVLVSSNDCVKLGDFGLSRYME 542
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 5e-08
Identities = 36/178 (20%), Positives = 60/178 (33%), Gaps = 46/178 (25%)
Query: 491 GGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID 541
G F IV+ K + E + L RHRN++ +
Sbjct: 16 GEFGIVHRCVETSSKKTYMAKFVK-VKGTDQVLVKKEISILNIARHRNILHL-------- 66
Query: 542 FEGFDFKA--------ISNGQL--RLC--NLSLTQR--VNIAIDVAFAIEYLRHHCQPSI 587
E F+ IS + R+ L +R V+ V A+++L H +I
Sbjct: 67 HESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL--HSH-NI 123
Query: 588 VHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
H D++P NI+ + + + G A+ +PG + Y AP
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQ---LKPGDNFRL------LFTAPEYYAP 172
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 5e-08
Identities = 43/192 (22%), Positives = 68/192 (35%), Gaps = 53/192 (27%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASRSFAA---------EFNALRNIRHRNLI 531
G F V+ V +K K+K + E L + H N+I
Sbjct: 34 SGAFGFVWTAVDKEKNKEVVVKFIK-KEKVLEDCWIEDPKLGKVTLEIAILSRVEHANII 92
Query: 532 KIITICSSIDF------------EGFDFKAISNGQL--RLCNLSLTQRVNIAIDVAFAIE 577
K++ I + F + F F + +L L + Q V+ A+
Sbjct: 93 KVLDIFENQGFFQLVMEKHGSGLDLFAF-IDRHPRLDEPLASYIFRQLVS-------AVG 144
Query: 578 YLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGT 637
YLR I+H D+K NI++ +D + D G A + E G T GT
Sbjct: 145 YLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAY---LERGKLFYTFC------GT 192
Query: 638 VGYVAPVIIAAR 649
+ Y AP ++
Sbjct: 193 IEYCAPEVLMGN 204
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 7e-08
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 15/78 (19%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQD---VVTHVGDLGLAKFLYGYEPGTTAETA 628
+ A+EYL H I+H DLKP NILL++D +T D G AK L A +
Sbjct: 139 IVSALEYL-HGKG--IIHRDLKPENILLNEDMHIQIT---DFGTAKVLSPESKQARANS- 191
Query: 629 SSSIGINGTVGYVAPVII 646
GT YV+P ++
Sbjct: 192 -----FVGTAQYVSPELL 204
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 7e-08
Identities = 38/243 (15%), Positives = 69/243 (28%), Gaps = 68/243 (27%)
Query: 462 SMKQQFPMISHAELSKATNNFSPANKIREGGFNIVY---------NVAMKVANLKQ---- 508
S ++ L + + I +G + +V A+K+ N +
Sbjct: 8 SSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQI 67
Query: 509 -KEASRSFAAEFNALRNIRHRNLIKIITICSSIDF-----------EGFDF--------- 547
+ E ++ + H N+ ++ + + D
Sbjct: 68 NPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDST 127
Query: 548 -----------------------KAISNGQLRLCNLSLTQRV--NIAIDVAFAIEYLRHH 582
+G + +++ NI + A+ YL H
Sbjct: 128 GKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL--H 185
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
Q I H D+KP N L + + D GL+K Y G GT +
Sbjct: 186 NQ-GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMT----TKAGTPYF 240
Query: 641 VAP 643
VAP
Sbjct: 241 VAP 243
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 8e-08
Identities = 32/167 (19%), Positives = 66/167 (39%), Gaps = 51/167 (30%)
Query: 490 EGGFNIVY--------------NVAMKVANLKQKEASRS----FAAEFNALRNIRHRNLI 531
+G F +VY VA+K + + AS F E + ++ +++
Sbjct: 35 QGSFGMVYEGVAKGVVKDEPETRVAIKT--VN-EAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 532 KIITICSS-----IDFEGFDFKAISNGQLR---------------LCNLSLTQRVNIAID 571
+++ + S + E ++ G L+ L SL++ + +A +
Sbjct: 92 RLLGVVSQGQPTLVIME-----LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 146
Query: 572 VAFAIEYL-RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+A + YL + VH DL N ++ +D +GD G+ + +Y
Sbjct: 147 IADGMAYLNANKF----VHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 8e-08
Identities = 43/228 (18%), Positives = 76/228 (33%), Gaps = 55/228 (24%)
Query: 455 HKDSNMLSMKQQFPMISHAELSKATNNFSPANKIRE----------GGFNIVY------- 497
H + S ++ + + S + E G + V
Sbjct: 2 HHHHHHSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVT 61
Query: 498 --NVAMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF--------EG 544
A+K+ ++ S+ E L+ + H N++K+ +G
Sbjct: 62 HVERAIKIIRKTSVSTSSNSK-LLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG 120
Query: 545 ---FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL-- 599
FD + I + I V + YL H +IVH DLKP N+LL
Sbjct: 121 GELFD-EIIHRM-----KFNEVDAAVIIKQVLSGVTYL--HKH-NIVHRDLKPENLLLES 171
Query: 600 -DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
++D + + D GL+ +E + GT Y+AP ++
Sbjct: 172 KEKDALIKIVDFGLSAV---FENQKKMKERL------GTAYYIAPEVL 210
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 46/216 (21%), Positives = 78/216 (36%), Gaps = 46/216 (21%)
Query: 449 RRKKPAHKDSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIVY----------N 498
K + +++ Q F + + + ++ EG F V+
Sbjct: 12 TEGKGSGLQGHIIENPQYFSDACVHHIKR--RDIVLKWELGEGAFGKVFLAECHNLLPEQ 69
Query: 499 VAMKVANLKQ-KEASRS----FAAEFNALRNIRHRNLIKIITICS-----SIDFE----- 543
M VA +K KEAS S F E L ++H+++++ +C+ + FE
Sbjct: 70 DKMLVA-VKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 128
Query: 544 ----------GFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDL 592
+ L L Q + +A VA + YL H VH DL
Sbjct: 129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF----VHRDL 184
Query: 593 KPSNILLDQDVVTHVGDLGLAKFLYG---YEPGTTA 625
N L+ Q +V +GD G+++ +Y Y G
Sbjct: 185 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 50/189 (26%), Positives = 69/189 (36%), Gaps = 52/189 (27%)
Query: 491 GGFNIVY---------NVAMKVANLKQKEASRSFAA------EFNALRNIRHRNLIKIIT 535
G F IV A K ++ +SR + E N LR IRH N+I +
Sbjct: 16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHD 75
Query: 536 ICSSIDF-----------EGFDFKAISNGQLRLCNLSLTQR--VNIAIDVAFAIEYLRHH 582
I + E FD SLT+ + + YL H
Sbjct: 76 IFENKTDVVLILELVSGGELFD-FLAEKE-------SLTEDEATQFLKQILDGVHYL--H 125
Query: 583 CQPSIVHGDLKPSNILL-DQDVVTH---VGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+ I H DLKP NI+L D++V + D G+A E G + I GT
Sbjct: 126 SK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK---IEAGNEFKN------IFGTP 175
Query: 639 GYVAPVIIA 647
+VAP I+
Sbjct: 176 EFVAPEIVN 184
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 1e-07
Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 37/171 (21%)
Query: 485 ANKIREGGFNIVYNVAMKV----ANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSS 539
A I + VA+K+ A K +E ++ I +H+N+I ++ C+
Sbjct: 56 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGKHKNIINLLGACTQ 112
Query: 540 -----IDFE----------------GFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEY 578
+ E + ++ ++ V+ +A +EY
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 579 L-RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG---YEPGTTA 625
L C +H DL N+L+ ++ V + D GLA+ + Y+ T
Sbjct: 173 LASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 1e-07
Identities = 53/363 (14%), Positives = 117/363 (32%), Gaps = 74/363 (20%)
Query: 43 SLERLILSNNSFS----CAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID 98
S+E L ++ + ++ A L ++ ++ N + + +
Sbjct: 5 SIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLS----------- 53
Query: 99 CGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWL 158
+++ K L + + + + + + + L +
Sbjct: 54 -----ENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQA---------LLKCPKLHTV 99
Query: 159 NLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSN 218
L N G L I+ L+ + LE LY + NG P + A ++ ++++A+
Sbjct: 100 RLSDNAFGPTAQEPL--IDFLSKHTPLEHLYLHNNGLG---PQAGAKIARALQELAVNKK 154
Query: 219 RISSTIPHGIRNLV-NLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL-----QGSI 272
++ +R+++ N L S + L + + N + + +
Sbjct: 155 AKNAP---PLRSIICGRNRLENGSMKEWAK---TFQSHRLLHTVKMVQNGIRPEGIEHLL 208
Query: 273 LSSLGNLTLQTYLFNNLQGN---------IPSSLANCKSLLGLSVSHNKLTSTLPQQILS 323
L L L +LQ N + +L + +L L ++ L++ ++
Sbjct: 209 LEGLAYCQELKVL--DLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266
Query: 324 V------TTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYF 377
L L L N + V LK ++ E + L L+ N F
Sbjct: 267 AFSKLENIGL-QTLRLQYNEIE---LDAVRTLKTVID-------EKMPDLLFLELNGNRF 315
Query: 378 GSE 380
E
Sbjct: 316 SEE 318
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 40/179 (22%), Positives = 61/179 (34%), Gaps = 48/179 (26%)
Query: 490 EGGFNIVY----------NVAMKVA--NLKQKEASRS----FAAEFNALRNI-RHRNLIK 532
G F V VA LK + A+ S +E L +I H N++
Sbjct: 37 RGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 533 IITICSSID------FE----------------GFDFKAISNGQLRLCNLSLTQRVNIAI 570
++ C+ E F ++ L L+L + +
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 571 DVAFAIEYL-RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG---YEPGTTA 625
VA +E+L C +H DL NILL + V + D GLA+ +Y Y A
Sbjct: 156 QVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 38/185 (20%), Positives = 61/185 (32%), Gaps = 54/185 (29%)
Query: 490 EGGFNIVY----------NVAMKVA--NLKQKEASRS----FAAEFNALRNIRHRNLIKI 533
EG F V VA LK + AS S +EFN L+ + H ++IK+
Sbjct: 33 EGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVIKL 91
Query: 534 ITICS-----------------------------SIDFEGFDFKAISNGQLRLCNLSLTQ 564
CS G + S L++
Sbjct: 92 YGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151
Query: 565 RVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG---YE 620
++ A ++ ++YL VH DL NIL+ + + D GL++ +Y Y
Sbjct: 152 LISFAWQISQGMQYLAEMKL----VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 621 PGTTA 625
+
Sbjct: 208 KRSQG 212
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 13/161 (8%)
Query: 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFN 191
E ++ + F L L+WLNL N L + +A D LT L L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFD---DLTE---LGTLGLA 91
Query: 192 RNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMESSQLIGTIPP 250
N LP + + + + ++ +G N++ S +P G+ L L L + ++QL +IP
Sbjct: 92 NNQLA-SLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQL-QSIPA 148
Query: 251 -LIGETPNLQLLNIGGNHLQGSILSSLGNLT-LQT-YLFNN 288
+ NLQ L++ N LQ + L LQT LF N
Sbjct: 149 GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 44/168 (26%), Positives = 61/168 (36%), Gaps = 35/168 (20%)
Query: 45 ERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNL------VRDILTEICSLFKLERLRID 98
E+L L + + A + L L+ D N L V D LTE L L +
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTE------LGTLGLA 91
Query: 99 CGGRIDSL-----GHLKSLLLLSLAFNQFLSLSN-----ASSLEMIEFSRNQFS---GGV 145
++ SL HL L L L NQ SL + + L+ + + NQ G
Sbjct: 92 -NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGA 150
Query: 146 SVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRN 193
F +L NL L+L N L S D KL+ + N
Sbjct: 151 ---FDKLTNLQTLSLSTNQLQSVPHGAFD------RLGKLQTITLFGN 189
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 47/188 (25%), Positives = 70/188 (37%), Gaps = 52/188 (27%)
Query: 491 GGFNIVY---------NVAMKVANLKQKEASRSFAA------EFNALRNIRHRNLIKIIT 535
G F IV A K +Q ASR E + LR + H N+I +
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITL-- 80
Query: 536 ICSSIDFEGFDFKA--------ISNGQL--RLC-NLSLTQR--VNIAIDVAFAIEYLRHH 582
+ ++ + +S G+L L SL++ + + + YL H
Sbjct: 81 ------HDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL--H 132
Query: 583 CQPSIVHGDLKPSNILLDQDVVTH----VGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+ I H DLKP NI+L + + D GLA E G + I GT
Sbjct: 133 TK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE---IEDGVEFKN------IFGTP 182
Query: 639 GYVAPVII 646
+VAP I+
Sbjct: 183 EFVAPEIV 190
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 44/185 (23%)
Query: 490 EGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
+GGF + A K+ + L + + E + R++ H++++
Sbjct: 51 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF---- 106
Query: 538 SSIDFEGFDFKA--------ISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQ 584
F+ L R L+ + + +YL +
Sbjct: 107 ----HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 161
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPV 644
++H DLK N+ L++D+ +GD GLA + G + + GT Y+AP
Sbjct: 162 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKV------LCGTPNYIAPE 211
Query: 645 IIAAR 649
+++ +
Sbjct: 212 VLSKK 216
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 16/83 (19%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAET 627
D+ AI++L H +I H D+KP N+L ++D V + D G AK
Sbjct: 136 DIGTAIQFL--HSH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET---TQNALQTP 189
Query: 628 ASSSIGINGTVGYVAPVIIAARN 650
T YVAP ++
Sbjct: 190 C-------YTPYYVAPEVLGPEK 205
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 2e-07
Identities = 45/189 (23%), Positives = 69/189 (36%), Gaps = 52/189 (27%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASRSFAA------EFNALRNIRHRNLIKII 534
G F +V A K ++ ++SR + E + L+ I+H N+I +
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80
Query: 535 TICSSIDF-----------EGFDFKAISNGQLRLCNLSLTQR--VNIAIDVAFAIEYLRH 581
+ + E FD SLT+ + + YL
Sbjct: 81 EVYENKTDVILILELVAGGELFD-FLAEKE-------SLTEEEATEFLKQILNGVYYL-- 130
Query: 582 HCQPSIVHGDLKPSNILL-DQDVVTH---VGDLGLAKFLYGYEPGTTAETASSSIGINGT 637
H I H DLKP NI+L D++V + D GLA + G + I GT
Sbjct: 131 HSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFGNEFKN------IFGT 180
Query: 638 VGYVAPVII 646
+VAP I+
Sbjct: 181 PEFVAPEIV 189
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 2e-07
Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 44/185 (23%)
Query: 490 EGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
+GGF + A K+ + L + + E + R++ H++++
Sbjct: 25 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF---- 80
Query: 538 SSIDFEGFDFKA--------ISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQ 584
F+ L R L+ + + +YL +
Sbjct: 81 ----HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 135
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPV 644
++H DLK N+ L++D+ +GD GLA + G + + GT Y+AP
Sbjct: 136 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKV------LCGTPNYIAPE 185
Query: 645 IIAAR 649
+++ +
Sbjct: 186 VLSKK 190
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 2e-07
Identities = 33/162 (20%), Positives = 67/162 (41%), Gaps = 31/162 (19%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE-----ASRSFAAEFNALR 523
+++ F K+ G + VY VA+K L +E A R E + ++
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR----EISLMK 58
Query: 524 NIRHRNLIKIITICSSID-----FEGFDF---KAISNGQLRLCNLSLTQRV--NIAIDVA 573
++H N++++ + + + FE D K + + + L + +
Sbjct: 59 ELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 574 FAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
+ + + I+H DLKP N+L+++ +GD GLA+
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARA 157
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 46/184 (25%)
Query: 487 KIREGGFNIVY---------NVAMKVANLKQKEAS--RSFAAEFNALRNIRHRNLIKIIT 535
++ +G F++V A + N K+ A + E R ++H N++++
Sbjct: 18 ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 536 ICSSIDF-----------EGFDFKAISNGQLRLCNLSLTQR--VNIAIDVAFAIEYLRHH 582
S E F+ ++ ++ + + A+ + H
Sbjct: 78 SISEEGHHYLIFDLVTGGELFE-DIVARE-------YYSEADASHCIQQILEAVLHC--H 127
Query: 583 CQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
+VH +LKP N+LL + + D GLA + G + G GT G
Sbjct: 128 QM-GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF--------GFAGTPG 178
Query: 640 YVAP 643
Y++P
Sbjct: 179 YLSP 182
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 2e-07
Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 34/159 (21%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKE-----ASRSFAAEFNALRNI 525
+ +K+ EG + VY VA+K L+ +E A R E + L+++
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR----EVSLLKDL 57
Query: 526 RHRNLIKIITICSSID-----FE--GFDFKAISNGQLRLCNLSLTQRV--NIAIDVAFAI 576
+H N++ + I + FE D K L C + + +
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQY----LDDCGNIINMHNVKLFLFQLLRGL 113
Query: 577 EYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
Y ++H DLKP N+L+++ + D GLA+
Sbjct: 114 AYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARA 149
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 2e-07
Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 34/155 (21%)
Query: 499 VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICS-----SIDFE------- 543
VA+K LK F E ++H N++ ++ + + S+ F
Sbjct: 42 VAIKT--LKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 99
Query: 544 ---------GFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLK 593
D + + + L V++ +A +EYL HH VH DL
Sbjct: 100 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHV----VHKDLA 155
Query: 594 PSNILLDQDVVTHVGDLGLAKFLYG---YEPGTTA 625
N+L+ + + DLGL + +Y Y+ +
Sbjct: 156 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 31/175 (17%), Positives = 60/175 (34%), Gaps = 43/175 (24%)
Query: 490 EGGFNIVY----------NVAMKVA--NLKQK---EASRSFAAEFNALRNI-RHRNLIKI 533
G F V + +KVA LK + + +E + ++ +H N++ +
Sbjct: 56 AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 115
Query: 534 ITICSS-----IDFE--------------GFDFKAISNGQLRLCNLSLTQRVNIAIDVAF 574
+ C+ + E + + S ++ + VA
Sbjct: 116 LGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQ 175
Query: 575 AIEYL-RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG---YEPGTTA 625
+ +L +C +H D+ N+LL V +GD GLA+ + Y A
Sbjct: 176 GMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 2e-07
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 34/180 (18%)
Query: 463 MKQQFPMISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANL-KQKEAS 512
M +Q+ + + + + KI +G F V+ VA+K + +KE
Sbjct: 1 MAKQYDSVECPFCDEV-SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 59
Query: 513 RSFAA-EFNALRNIRHRNLIKIITICSSIDFEG----------FDF------KAISNGQL 555
A E L+ ++H N++ +I IC + FDF +SN +
Sbjct: 60 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV 119
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
+ +L++ + + + Y+ + I+H D+K +N+L+ +D V + D GLA+
Sbjct: 120 KF---TLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARA 173
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 40/192 (20%), Positives = 70/192 (36%), Gaps = 52/192 (27%)
Query: 486 NKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNAL-RNIRHRNLIKIIT 535
I G +++ A+K+ + +++ + E L R +H N+I +
Sbjct: 28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE----EIEILLRYGQHPNIITLKD 83
Query: 536 ICSSIDF-----------EGFDFKAISNGQLRLCNLSLTQR--VNIAIDVAFAIEYLRHH 582
+ + E D K + ++R + + +EYL H
Sbjct: 84 VYDDGKYVYVVTELMKGGELLD-KILRQK-------FFSEREASAVLFTITKTVEYL--H 133
Query: 583 CQPSIVHGDLKPSNILL-----DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGT 637
Q +VH DLKPSNIL + + + + D G AK L E G T
Sbjct: 134 AQ-GVVHRDLKPSNILYVDESGNPESIR-ICDFGFAKQLRA-ENGLLMTPC-------YT 183
Query: 638 VGYVAPVIIAAR 649
+VAP ++ +
Sbjct: 184 ANFVAPEVLERQ 195
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 46/188 (24%), Positives = 66/188 (35%), Gaps = 52/188 (27%)
Query: 491 GGFNIVY---------NVAMKVANLKQKEASRSFAA------EFNALRNIRHRNLIKIIT 535
G F IV A K +Q ASR + E + LR + H N+I +
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 536 ICSSIDF-----------EGFDFKAISNGQLRLCNLSLTQR--VNIAIDVAFAIEYLRHH 582
+ + E FD SL++ + + + YL H
Sbjct: 83 VYENRTDVVLILELVSGGELFD-FLAQKE-------SLSEEEATSFIKQILDGVNYL--H 132
Query: 583 CQPSIVHGDLKPSNILLDQDVVTH----VGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+ I H DLKP NI+L + + D GLA E G + I GT
Sbjct: 133 TK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE---IEDGVEFKN------IFGTP 182
Query: 639 GYVAPVII 646
+VAP I+
Sbjct: 183 EFVAPEIV 190
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 2e-07
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
+ +E+L +I++ DLKP N+LLD D +V DLGLA T +
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDD--GNVRISDLGLAV--ELKAGQTKTKG-- 348
Query: 630 SSIGINGTVGYVAPVII 646
GT G++AP ++
Sbjct: 349 ----YAGTPGFMAPELL 361
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 35/170 (20%)
Query: 485 ANKIREGGFNIVYNVAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSS- 539
A + + N V VA+K+ LK ++ +E ++ I +H+N+I ++ C+
Sbjct: 90 AIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147
Query: 540 ----IDFE----------------GFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL 579
+ E + + LS V+ A VA +EYL
Sbjct: 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 207
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG---YEPGTTA 625
C +H DL N+L+ +D V + D GLA+ ++ Y+ T
Sbjct: 208 ASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 3e-07
Identities = 31/155 (20%), Positives = 59/155 (38%), Gaps = 29/155 (18%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMK-VANLKQKEASRSFAA-EFNALRNIRHR 528
+ KI EG + +V+ VA+K + + A E L+ ++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 529 NLIKIITICSSID-----FEGF---DFKAISNGQLRLCNLSLTQRV--NIAIDVAFAIEY 578
NL+ ++ + FE + +L + + + +I A+ +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFE-YCDHTVL----HELDRYQRGVPEHLVKSITWQTLQAVNF 117
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
H + +H D+KP NIL+ + V + D G A
Sbjct: 118 CHKH---NCIHRDVKPENILITKHSVIKLCDFGFA 149
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 3e-07
Identities = 37/185 (20%), Positives = 68/185 (36%), Gaps = 46/185 (24%)
Query: 490 EGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
+G F VY +A+KV A L++ E ++RH N++++
Sbjct: 19 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL---- 74
Query: 538 SSIDFEGF-DFKAI-------SNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQ 584
+ F D + G + +L + ++A A+ Y H +
Sbjct: 75 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC-HSKR 129
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPV 644
++H D+KP N+LL + D G + + P + GT+ Y+ P
Sbjct: 130 --VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLC------GTLDYLPPE 177
Query: 645 IIAAR 649
+I R
Sbjct: 178 MIEGR 182
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
D+ IEYL H Q I+H D+KPSN+L+ +D + D G++ G
Sbjct: 145 DLIKGIEYL--HYQ-KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG--SDALLSNTV- 198
Query: 631 SIGINGTVGYVAPVIIAAR 649
GT ++AP ++
Sbjct: 199 -----GTPAFMAPESLSET 212
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 4e-07
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 16/77 (20%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
+ +E L IV+ DLKP NILLD H+ DLGLA + G T +
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHG--HIRISDLGLAVHV---PEGQTIKG-- 344
Query: 630 SSIGINGTVGYVAPVII 646
GTVGY+AP ++
Sbjct: 345 ----RVGTVGYMAPEVV 357
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 4e-07
Identities = 44/233 (18%), Positives = 77/233 (33%), Gaps = 58/233 (24%)
Query: 449 RRKKPAHKDSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIVY---------NV 499
++ + M + K ++ K+ G + V
Sbjct: 5 HHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEK 64
Query: 500 AMKV-------------ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF---- 542
A+KV N ++ E + L+++ H N+IK+ + +
Sbjct: 65 AIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLV 124
Query: 543 ----EG---FDFKAISNGQLRLCNLSLTQR--VNIAIDVAFAIEYLRHHCQPSIVHGDLK 593
EG F+ + I+ + + NI + I YL H +IVH D+K
Sbjct: 125 TEFYEGGELFE-QIINRHKF-------DECDAANIMKQILSGICYL--HKH-NIVHRDIK 173
Query: 594 PSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
P NILL + + + D GL+ F + GT Y+AP
Sbjct: 174 PENILLENKNSLLNIKIVDFGLSSF---FSKDYKLRDRL------GTAYYIAP 217
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 4e-07
Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 54/185 (29%)
Query: 490 EGGFNIVY----------NVAMKVA--NLKQKEASRS----FAAEFNALRNI-RHRNLIK 532
G F V V+++VA LK ++A S +E + + H N++
Sbjct: 55 SGAFGKVMNATAYGISKTGVSIQVAVKMLK-EKADSSEREALMSELKMMTQLGSHENIVN 113
Query: 533 IITICS----------------------------SIDFEGFDFKAISNGQLRLCNLSLTQ 564
++ C+ S D ++ + + L L+
Sbjct: 114 LLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFED 173
Query: 565 RVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG---YE 620
+ A VA +E+L C VH DL N+L+ V + D GLA+ + Y
Sbjct: 174 LLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 621 PGTTA 625
A
Sbjct: 230 VRGNA 234
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 4e-07
Identities = 35/180 (19%), Positives = 55/180 (30%), Gaps = 38/180 (21%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSS 539
EG V A+K+ + E L + HRN++++I
Sbjct: 23 EGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE 82
Query: 540 IDF-----------EGFDFKAISNGQLRLCNLSLTQR--VNIAIDVAFAIEYLRHHCQPS 586
D + + DVA A+++L H +
Sbjct: 83 EDRFYLVFEKMRGGSILS-HIHKRR-------HFNELEASVVVQDVASALDFL--HNK-G 131
Query: 587 IVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
I H DLKP NIL +Q + D L + + T G+ Y+AP
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC-GSAEYMAP 190
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 4e-07
Identities = 33/158 (20%), Positives = 62/158 (39%), Gaps = 32/158 (20%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKE------ASRSFAAEFNALRN 524
+ + K+ EG + VY VA+K L+ +E A R E + L+
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR----EVSLLKE 89
Query: 525 IRHRNLIKIITICSSID-----FE--GFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIE 577
++HRN+I++ ++ FE D K + + ++S+ + + +
Sbjct: 90 LQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMD---KNPDVSMRVIKSFLYQLINGVN 146
Query: 578 YLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
+ +H DLKP N+LL + L + F
Sbjct: 147 FCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDF 181
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 4e-07
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 14/77 (18%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
+ A++YL H + ++V+ DLK N++LD+D H+ D GL K G + G T +T
Sbjct: 257 IVSALDYL--HSEKNVVYRDLKLENLMLDKD--GHIKITDFGLCK--EGIKDGATMKT-- 308
Query: 630 SSIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 309 ----FCGTPEYLAPEVL 321
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 5e-07
Identities = 33/171 (19%), Positives = 65/171 (38%), Gaps = 37/171 (21%)
Query: 485 ANKIREGGFNIVYNVAMKVANLKQKEASRS----FAAEFNALRNI-RHRNLIKIITICSS 539
A I + VA+K+ LK +A+ +E ++ I +H+N+I ++ C+
Sbjct: 102 AVGIDKDKPKEAVTVAVKM--LK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158
Query: 540 -----IDFE----------------GFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEY 578
+ E + ++ ++ V+ +A +EY
Sbjct: 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 218
Query: 579 L-RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG---YEPGTTA 625
L C +H DL N+L+ ++ V + D GLA+ + Y+ T
Sbjct: 219 LASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 5e-07
Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 42/183 (22%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASRSFAA----EFNALRNIRHRNLIKIITI 536
EG F V VA+K + +Q E + L+ +RH ++IK+ +
Sbjct: 19 EGSFGKVKLATHYKTQQKVALKFIS-RQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDV 77
Query: 537 CSSIDF----------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
++ E FD + ++ + + + AIEY H
Sbjct: 78 ITTPTDIVMVIEYAGGELFD-YIVEKKRM-----TEDEGRRFFQQIICAIEYCHRH---K 128
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
IVH DLKP N+LLD ++ + D GL+ G +T+ G+ Y AP +I
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNI---MTDGNFLKTSC------GSPNYAAPEVI 179
Query: 647 AAR 649
+
Sbjct: 180 NGK 182
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 6e-07
Identities = 36/182 (19%), Positives = 63/182 (34%), Gaps = 53/182 (29%)
Query: 490 EGGFNIVY--------------NVAMKV----ANLKQKEASRSFAAEFNALRNI-RHRNL 530
G F V VA+K+ A+L ++EA +E L + H N+
Sbjct: 33 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREA---LMSELKVLSYLGNHMNI 89
Query: 531 IKIITICSS-----IDFE------------------GFDFKAISNGQLRLCNLSLTQRVN 567
+ ++ C+ + E + + + L L ++
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 568 IAIDVAFAIEYL-RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG---YEPGT 623
+ VA + +L +C +H DL NILL +T + D GLA+ + Y
Sbjct: 150 FSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205
Query: 624 TA 625
A
Sbjct: 206 NA 207
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 6e-07
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 92 LERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASS---LEMIEFSRNQFSGGVSVD 148
L+ R + G + L LS S++N L+ +E S N+ SGG+ V
Sbjct: 24 LDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSDNRVSGGLEVL 83
Query: 149 FSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRN 193
+ NL+ LNL N + +L I L L+ L
Sbjct: 84 AEKCPNLTHLNLSGNKI-----KDLSTIEPLKKLENLKSLDLFNC 123
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 6e-07
Identities = 33/165 (20%), Positives = 63/165 (38%), Gaps = 33/165 (20%)
Query: 499 VAMKVANLKQKEASRSFAA---EFNALRNIRHRNLIKIITICSSIDF-----------EG 544
VA+K+ + K + S E ++ + H N++K+ + + E
Sbjct: 43 VAIKIID-KTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEV 101
Query: 545 FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604
FD +++G++ + + + A++Y IVH DLK N+LLD D+
Sbjct: 102 FD-YLVAHGRM-----KEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMN 152
Query: 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ D G + + G + G Y AP + +
Sbjct: 153 IKIADFGFSNE---FTVGGKLDAFC------GAPPYAAPELFQGK 188
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 7e-07
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 15/83 (18%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAET 627
+ AI+YL H +I H D+KP N+L + + + D G AK + TT
Sbjct: 169 SIGEAIQYL--HSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--- 222
Query: 628 ASSSIGINGTVGYVAPVIIAARN 650
T YVAP ++
Sbjct: 223 ------PCYTPYYVAPEVLGPEK 239
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 8e-07
Identities = 36/183 (19%), Positives = 66/183 (36%), Gaps = 40/183 (21%)
Query: 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANL-KQKEASRSFAAEFNALRNI 525
S AT+ + P +I G + VY VA+K + + +R +
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLP--ISTVREV 62
Query: 526 ---------RHRNLIKIITICSSIDFEG-------FDF------KAISNGQLRLCNLSLT 563
H N+++++ +C++ + F+ + L
Sbjct: 63 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPP--GLPAE 120
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623
++ +++L +C IVH DLKP NIL+ + D GLA+ Y Y+
Sbjct: 121 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI-YSYQMAL 176
Query: 624 TAE 626
T
Sbjct: 177 TPV 179
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 9e-07
Identities = 33/190 (17%), Positives = 59/190 (31%), Gaps = 57/190 (30%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI 540
G F + VA+K + + E R++RH N+++ + +
Sbjct: 30 SGNFGVARLMRDKLTKELVAVKYIE-RGAAIDENVQREIINHRSLRHPNIVRFKEVILTP 88
Query: 541 DF-----------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVA---F-----AIEYLRH 581
E ++ + + G+ D A F + Y
Sbjct: 89 THLAIIMEYASGGELYE-RICNAGRFS-------------EDEARFFFQQLLSGVSYCHS 134
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTH--VGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
I H DLK N LLD + D G +K + ++ GT
Sbjct: 135 M---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SVLHSQPKSTV------GTPA 182
Query: 640 YVAPVIIAAR 649
Y+AP ++ +
Sbjct: 183 YIAPEVLLRQ 192
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 1e-06
Identities = 29/170 (17%), Positives = 62/170 (36%), Gaps = 39/170 (22%)
Query: 497 YNVAMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA---- 549
+ +A+KV + L+++ E ++RH N++++ + F +
Sbjct: 40 FIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM--------YNYFHDRKRIYL 91
Query: 550 ----ISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSNILL 599
G+L + + ++A A+ Y ++H D+KP N+L+
Sbjct: 92 MLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK----VIHRDIKPENLLM 147
Query: 600 DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ D G + + P T GT+ Y+ P +I +
Sbjct: 148 GYKGELKIADFGWSV----HAPSLRRRTMC------GTLDYLPPEMIEGK 187
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 1e-06
Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 34/158 (21%)
Query: 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQKE------ASRSFAAEFNALRNI 525
+ KI EG + +VY A+K L++++ R E + L+ +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR----EISILKEL 57
Query: 526 RHRNLIKIITICSSID-----FE--GFDFKAISNGQLRLCNLSLTQRV--NIAIDVAFAI 576
+H N++K+ + + FE D K + L +C L + + + I
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKL----LDVCEGGLESVTAKSFLLQLLNGI 113
Query: 577 EYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
Y ++H DLKP N+L++++ + D GLA+
Sbjct: 114 AYCHDRR---VLHRDLKPQNLLINREGELKIADFGLAR 148
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 1e-06
Identities = 45/184 (24%), Positives = 71/184 (38%), Gaps = 43/184 (23%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASRSFAA----EFNALRNIRHRNLIKIITI 536
G F V VA+K+ N +QK S E L+ RH ++IK+ +
Sbjct: 21 VGTFGKVKIGEHQLTGHKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 537 CSSIDF-----------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQP 585
S+ E FD +G++ + + + A++Y H
Sbjct: 80 ISTPTDFFMVMEYVSGGELFD-YICKHGRV-----EEMEARRLFQQILSAVDYCHRH--- 130
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
+VH DLKP N+LLD + + D GL+ G T+ G+ Y AP +
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNM---MSDGEFLRTSC------GSPNYAAPEV 181
Query: 646 IAAR 649
I+ R
Sbjct: 182 ISGR 185
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 47/165 (28%)
Query: 487 KIREGGFNIVY-----------NVAMKVANLKQKEASRSFAA--EFNALRNIRHRNLIKI 533
K+ G + VY + A+K + + S +A E LR ++H N+I +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALK----QIEGTGISMSACREIALLRELKHPNVISL 83
Query: 534 ITICSS---------IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAF---------- 574
+ S D+ D I ++ S + + +
Sbjct: 84 QKVFLSHADRKVWLLFDYAEHDLWHI----IKFHRASKANKKPVQLPRGMVKSLLYQILD 139
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTH----VGDLGLAKF 615
I YL + ++H DLKP+NIL+ + + D+G A+
Sbjct: 140 GIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 1e-06
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 32/158 (20%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKE------ASRSFAAEFNALRN 524
NF KI EG + +VY VA+K L + A R E + L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKE 58
Query: 525 IRHRNLIKIITICSSID-----FEGF---DFKAISNGQLRLCNLSLTQRVNIAIDVAFAI 576
+ H N++K++ + + + FE F D K + L + L + + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFE-FLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGL 116
Query: 577 EYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+ H ++H DLKP N+L++ + + D GLA+
Sbjct: 117 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 1e-06
Identities = 40/179 (22%), Positives = 64/179 (35%), Gaps = 37/179 (20%)
Query: 463 MKQQFPMISHAE---LSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKE- 510
M S E + K+ EG + +VY VA+K L ++
Sbjct: 1 MHHHHHHSSGRENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDE 60
Query: 511 -----ASRSFAAEFNALRNIRHRNLIKIITICSSID-----FE--GFDFKAISNGQLRLC 558
A R E + L+ + H N++ +I + S FE D K + L
Sbjct: 61 GIPSTAIR----EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKV----LDEN 112
Query: 559 NLSLTQRV--NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
L + + + H I+H DLKP N+L++ D + D GLA+
Sbjct: 113 KTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARA 168
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 41/175 (23%), Positives = 64/175 (36%), Gaps = 39/175 (22%)
Query: 486 NKIREGGFNIVY-------NVAMKVA--NLKQ---KEASRSFAAEFNALRNI-RHRNLIK 532
+ I EG F V + M A +K+ K+ R FA E L + H N+I
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 533 IITICSS-----IDFE----------------GFDFKAISNGQLRLCNLSLTQRVNIAID 571
++ C + E A + LS Q ++ A D
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 572 VAFAIEYL-RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
VA ++YL + +H DL NIL+ ++ V + D GL++ Y T
Sbjct: 151 VARGMDYLSQKQF----IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 201
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 39/161 (24%)
Query: 490 EGGFNIVY--------------NVAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIK 532
G F VY VA+K L ++ F E + H+N+++
Sbjct: 40 HGAFGEVYEGQVSGMPNDPSPLQVAVKT--LPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 533 IITICSS-----IDFE---GFDFK----AISNGQLRLCNLSLTQRVNIAIDVAFAIEYL- 579
I + I E G D K + +L++ +++A D+A +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 580 RHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLY 617
+H +H D+ N LL V +GD G+A+ +Y
Sbjct: 158 ENHF----IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 194
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 33/180 (18%), Positives = 63/180 (35%), Gaps = 48/180 (26%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSS 539
EG F+I A+K+ + + + ++ E AL+ H N++K+ +
Sbjct: 21 EGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKLHEVFHD 77
Query: 540 IDF-----------EGFDFKAISNGQLRLCNLSLTQR--VNIAIDVAFAIEYLRHHCQPS 586
E F+ + ++ I + A+ ++ H
Sbjct: 78 QLHTFLVMELLNGGELFE-RIKKKK-------HFSETEASYIMRKLVSAVSHM--HDV-G 126
Query: 587 IVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
+VH DLKP N+L + ++ + D G A+ +T T+ Y AP
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLK--PPDNQPLKTPC------FTLHYAAP 178
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 2e-06
Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 19/170 (11%)
Query: 129 SSLEMIEFSRNQFSG-GVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLER 187
S +++ S N S +RL NL L L N+L ++ L
Sbjct: 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFV------PVPNLRY 92
Query: 188 LYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMESSQLIG 246
L + N + ++L + ++ + + +N I + ++ L L + +Q+
Sbjct: 93 LDLSSNHLHTLDEFLFSDLQA-LEVLLLYNNHIVV-VDRNAFEDMAQLQKLYLSQNQIS- 149
Query: 247 TIPP----LIGETPNLQLLNIGGN---HLQGSILSSLGNLTLQT-YLFNN 288
P + P L LL++ N L + L L YL NN
Sbjct: 150 RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 3e-04
Identities = 31/142 (21%), Positives = 51/142 (35%), Gaps = 22/142 (15%)
Query: 40 RLISLERLILSNNSFSCAIPANLSSG-SNLIKLSTDSNNLVR---DILTEICSLFKLERL 95
RL +L L+LS+N + I + NL L SN+L + + L LE L
Sbjct: 62 RLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHLHTLDEFLFS---DLQALEVL 117
Query: 96 RIDCGGRIDSL-----GHLKSLLLLSLAFNQ--------FLSLSNASSLEMIEFSRNQFS 142
+ I + + L L L+ NQ + L +++ S N+
Sbjct: 118 LLY-NNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176
Query: 143 GGVSVDFSRLKNLSWLNLGVNN 164
D +L L ++N
Sbjct: 177 KLPLTDLQKLPAWVKNGLYLHN 198
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 14/126 (11%)
Query: 77 NLVRDILTEICSLFKLERLR-IDCGG----RIDSLGH-LKSLLLLSLAFNQFLSLSNASS 130
L +++ + R R +D G I++LG L + + N+ L
Sbjct: 3 KLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPL 62
Query: 131 ---LEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLER 187
L+ + + N+ L +L+ L L N+L EL ++ L + L
Sbjct: 63 LRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSL-----VELGDLDPLASLKSLTY 117
Query: 188 LYFNRN 193
L RN
Sbjct: 118 LCILRN 123
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 2e-06
Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 34/180 (18%)
Query: 490 EGGFNIVY---------NVAMKVANLKQK-EASRSFAAEFNALRNIRHRNLIKIITICSS 539
EG + V VA+K+ ++K+ + + E + + H N++K
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 540 IDFEGFDFKAISNGQL--RLCNLSLTQRVNIAIDVA---F-----AIEYLRHHCQPSIVH 589
+ + + S G+L R+ + + A F + YL I H
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITH 128
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
D+KP N+LLD+ + D GLA GT+ YVAP ++ R
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPELLKRR 182
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 2e-06
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 20/78 (25%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQD---VVTHVGDLGLAKFLYGYEPGTTAETA 628
V A+EYL H I++ DLKP NILLD++ +T D G AK T
Sbjct: 115 VCLALEYL-HSK--DIIYRDLKPENILLDKNGHIKIT---DFGFAK-----YVPDVTYT- 162
Query: 629 SSSIGINGTVGYVAPVII 646
+ GT Y+AP ++
Sbjct: 163 -----LCGTPDYIAPEVV 175
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 2e-06
Identities = 46/192 (23%), Positives = 68/192 (35%), Gaps = 59/192 (30%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASRSFAA----EFNALRNIRHRNLIKIITI 536
G F V VA+K+ N +QK S E L+ RH ++IK+ +
Sbjct: 26 VGTFGKVKVGKHELTGHKVAVKILN-RQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84
Query: 537 CSSIDF-----------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVA--------FAIE 577
S+ E FD NG+L + ++
Sbjct: 85 ISTPSDIFMVMEYVSGGELFD-YICKNGRLD-------------EKESRRLFQQILSGVD 130
Query: 578 YLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGT 637
Y H +VH DLKP N+LLD + + D GL+ G T+ G+
Sbjct: 131 YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM---MSDGEFLRTSC------GS 178
Query: 638 VGYVAPVIIAAR 649
Y AP +I+ R
Sbjct: 179 PNYAAPEVISGR 190
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 14/90 (15%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
+ AI+ + H + VH D+KP NILLD+ H+ D G L + A
Sbjct: 171 IVMAIDSV--H-RLGYVHRDIKPDNILLDRC--GHIRLADFGSCLKLRADGT-VRSLVAV 224
Query: 630 SSIGINGTVGYVAPVIIAARNLENREKRHT 659
GT Y++P I+ A +
Sbjct: 225 ------GTPDYLSPEILQAVGGGPGTGSYG 248
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 3e-06
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 20/78 (25%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQD---VVTHVGDLGLAKFLYGYEPGTTAETA 628
+ EYL H +++ DLKP N+L+DQ VT D G AK T
Sbjct: 150 IVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVT---DFGFAK-----RVKGRTWT- 197
Query: 629 SSSIGINGTVGYVAPVII 646
+ GT +AP II
Sbjct: 198 -----LCGTPEALAPEII 210
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 3e-06
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 32/166 (19%)
Query: 474 ELSKATNNFSPANKIREGGFNIVYN---------VAMK---VANLKQKEASRSFAA--EF 519
++ + + + EG F VY VA+K + + + + + A E
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 520 NALRNIRHRNLIKIITICSSID-----FEGF---DFKAISNGQLRLCNLSLTQRV--NIA 569
L+ + H N+I ++ F+ F D + I ++ +L LT
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFD-FMETDLEVI----IKDNSLVLTPSHIKAYM 118
Query: 570 IDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
+ +EYL H I+H DLKP+N+LLD++ V + D GLAK
Sbjct: 119 LMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKS 161
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 3e-06
Identities = 33/160 (20%), Positives = 62/160 (38%), Gaps = 35/160 (21%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKE------ASRSFAAEFNALRN 524
+ KI EG + V+ VA+K L + A R E L+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR----EICLLKE 57
Query: 525 IRHRNLIKIITICSSID-----FE--GFDFKAISNGQLRLCNLSLTQRV--NIAIDVAFA 575
++H+N++++ + S FE D K CN L + + +
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKY----FDSCNGDLDPEIVKSFLFQLLKG 113
Query: 576 IEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
+ + ++H DLKP N+L++++ + + GLA+
Sbjct: 114 LGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARA 150
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 36/159 (22%), Positives = 59/159 (37%), Gaps = 35/159 (22%)
Query: 490 EGGFNIVY--------------NVAMKVANLKQKEASRS-FAAEFNALRNIRHRNLIKII 534
G F VY VA+K E F E + H+N+++ I
Sbjct: 81 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 140
Query: 535 TICSS-----IDFE---GFDFK----AISNGQLRLCNLSLTQRVNIAIDVAFAIEYL-RH 581
+ I E G D K + +L++ +++A D+A +YL +
Sbjct: 141 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 200
Query: 582 HCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLY 617
H +H D+ N LL V +GD G+A+ +Y
Sbjct: 201 HF----IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 235
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 49.0 bits (116), Expect = 3e-06
Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 24/124 (19%)
Query: 217 SNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP-LIGETPNLQLLNIGGNHLQGSILSS 275
+ + H + NL L +E+ Q + + + L+ L I + L+
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR------ 69
Query: 276 LGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDN 335
+ F+ L L++S N L +L + + +L L L
Sbjct: 70 ----FVAPDAFHFT-----------PRLSRLNLSFNALE-SLSWKTVQGLSLQ-ELVLSG 112
Query: 336 NLLN 339
N L+
Sbjct: 113 NPLH 116
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 29/155 (18%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAA-EFNALRNIRHR 528
+ + EG + +V VA+K + + A E L+ +RH
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84
Query: 529 NLIKIITICSSID-----FEGF---DFKAISNGQLRLCNLSLTQRV--NIAIDVAFAIEY 578
NL+ ++ +C FE F L L L +V + I +
Sbjct: 85 NLVNLLEVCKKKKRWYLVFE-FVDHTILDD----LELFPNGLDYQVVQKYLFQIINGIGF 139
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
H +I+H D+KP NIL+ Q V + D G A
Sbjct: 140 CHSH---NIIHRDIKPENILVSQSGVVKLCDFGFA 171
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 5e-06
Identities = 38/189 (20%), Positives = 62/189 (32%), Gaps = 52/189 (27%)
Query: 490 EGGFNIVY---------NVAMKVANLKQK-EASRSFAAEFNALRNIRHRNLIKIITICSS 539
EG + V VA+K+ ++K+ + + E + + H N++K
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 540 IDF-----------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVA---F-----AIEYLR 580
+ E FD + + + A F + YL
Sbjct: 77 GNIQYLFLEYCSGGELFD-RIEPDIGMP-------------EPDAQRFFHQLMAGVVYLH 122
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
I H D+KP N+LLD+ + D GLA GT+ Y
Sbjct: 123 GI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPY 173
Query: 641 VAPVIIAAR 649
VAP ++ R
Sbjct: 174 VAPELLKRR 182
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 6e-06
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 92 LERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNAS---SLEMIEFSRNQFSGGVSVD 148
L+ + + G +L LSL +S+SN L+ +E S N+ GG+ +
Sbjct: 31 LDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNLPKLPKLKKLELSENRIFGGLDML 90
Query: 149 FSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRN 193
+L NL+ LNL N L ++ + L L+ L
Sbjct: 91 AEKLPNLTHLNLSGNKL-----KDISTLEPLKKLECLKSLDLFNC 130
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 7e-06
Identities = 37/187 (19%), Positives = 62/187 (33%), Gaps = 58/187 (31%)
Query: 490 EGGFNIVY--------------NVAMKVANLKQKEASRS----FAAEFNALRNIRHRNLI 531
EG F V+ VA+K+ LK +EAS F E + + N++
Sbjct: 57 EGAFGRVFQARAPGLLPYEPFTMVAVKM--LK-EEASADMQADFQREAALMAEFDNPNIV 113
Query: 532 KIITICS-----------------------------SIDFEGFDFKAISNGQLRLCNLSL 562
K++ +C+ LS
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 563 TQRVNIAIDVAFAIEYL-RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG--- 618
+++ IA VA + YL VH DL N L+ +++V + D GL++ +Y
Sbjct: 174 AEQLCIARQVAAGMAYLSERKF----VHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
Query: 619 YEPGTTA 625
Y+
Sbjct: 230 YKADGND 236
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 8e-06
Identities = 39/186 (20%), Positives = 69/186 (37%), Gaps = 45/186 (24%)
Query: 490 EGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
+G F VY VA+K+ + + + E ++H +++++
Sbjct: 21 KGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY- 79
Query: 538 SSIDFEGFDFKAI-------SNGQL------RLCNLSLTQRVNIAIDVAFAIEYL-RHHC 583
FE D + NG++ R+ S + + + + YL H
Sbjct: 80 ----FE--DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG- 132
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
I+H DL SN+LL +++ + D GLA L P T + GT Y++P
Sbjct: 133 ---ILHRDLTLSNLLLTRNMNIKIADFGLATQL--KMPHEKHYT------LCGTPNYISP 181
Query: 644 VIIAAR 649
I
Sbjct: 182 EIATRS 187
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 8e-06
Identities = 28/211 (13%), Positives = 59/211 (27%), Gaps = 47/211 (22%)
Query: 111 SLLLLSLAFNQFLSL-----SNASSLEMIEFSRNQFSGGVSVD-FSRLKNLSWLNLGVNN 164
S L L ++ SN ++ I S + + F L ++ + +
Sbjct: 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTR 91
Query: 165 LGSGTANELDFI--NLLTNCSKLERLYFNRNGF--------------------------E 196
L +I + L L+ L G
Sbjct: 92 -------NLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEITDNPYMT 144
Query: 197 GVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP--LIGE 254
+ ++ L + + + +N +S + N L+ + + ++ + I G
Sbjct: 145 SIPVNAFQGLCNETLTLKLYNNGFTS-VQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGV 203
Query: 255 TPNLQLLNIGGN---HLQGSILSSLGNLTLQ 282
LL++ L L L L +
Sbjct: 204 YSGPSLLDVSQTSVTALPSKGLEHLKELIAR 234
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 5e-04
Identities = 31/219 (14%), Positives = 65/219 (29%), Gaps = 37/219 (16%)
Query: 182 CSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMES 241
C + E I +L + + + + + + H NL N++ + +
Sbjct: 10 CHQEEDFRVTCKDI-----QRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSI 64
Query: 242 SQLIGTIPPLI-GETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANC 300
+ + + + I NL P +L
Sbjct: 65 DVTLQQLESHSFYNLSKVTHIEIRNT--------------------RNLTYIDPDALKEL 104
Query: 301 KSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEV----GNLKNLLRLH 356
L L + + L + T + LE+ +N S+P N L+L+
Sbjct: 105 PLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLY 164
Query: 357 ------IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNN 389
+ Y N + + + L+ N + + + K F
Sbjct: 165 NNGFTSVQGYAFNGTKLDAVYLNKNKYLTVID-KDAFGG 202
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 9e-06
Identities = 41/222 (18%), Positives = 74/222 (33%), Gaps = 46/222 (20%)
Query: 449 RRKKPAHKDSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIVYN---------V 499
+R P +D+ + + ++ + E + + + ++ G F V+
Sbjct: 28 QRLGPETEDNEGVLLTEKLKPVD-YEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQC 86
Query: 500 AMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA---------I 550
A+K L+ E A + ++ G + +
Sbjct: 87 AVKKVRLEVFRVE-----ELVACAGLSSPRIVP---------LYGAVREGPWVNIFMELL 132
Query: 551 SNGQLRLC-----NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-VV 604
G L L + + +EYL H + I+HGD+K N+LL D
Sbjct: 133 EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYL--HTR-RILHGDVKADNVLLSSDGSR 189
Query: 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP-VI 645
+ D G A L G + T I GT ++AP V+
Sbjct: 190 AALCDFGHALCLQPDGLGKSLLTGDY---IPGTETHMAPEVV 228
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 9e-06
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 204 ANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMESSQLIGTIPPLI-GETPNLQLL 261
+N+ + K++ + SN++SS +P L L L + ++L T+P I E NL+ L
Sbjct: 33 SNIPADTKKLDLQSNKLSS-LPSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETL 90
Query: 262 NIGGNHLQGSI-------LSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT 314
+ N LQ ++ L +L L L +L + SL L LS+ +N+L
Sbjct: 91 WVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTK---LTYLSLGYNELQ 146
Query: 315 STLPQQILSVTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLH 356
S LP+ + T L L NN L +P L L L
Sbjct: 147 S-LPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLK 187
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 47/204 (23%), Positives = 78/204 (38%), Gaps = 38/204 (18%)
Query: 43 SLERLILSNNSFSCAIPANLSSG-SNLIKLSTDSNNLVRDILTEIC-SLFKLERLRIDCG 100
++L L +N S ++P+ + L L + N L + + I L LE L +
Sbjct: 38 DTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVT-D 94
Query: 101 GRIDSL-----GHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNL 155
++ +L L +L L L NQ SL V F L L
Sbjct: 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPP----------------RV---FDSLTKL 135
Query: 156 SWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAM 215
++L+LG N L S F L + L+ L N + V + L+ +K + +
Sbjct: 136 TYLSLGYNELQSLPKGV--FDKL----TSLKELRLYNNQLKRVPEGAFDKLTE-LKTLKL 188
Query: 216 GSNRISSTIPHGI-RNLVNLNWLT 238
+N++ +P G +L L L
Sbjct: 189 DNNQLKR-VPEGAFDSLEKLKMLQ 211
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 1e-05
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
++ A+ +L H + I++ DLKP NI+L+ HV D GL K GT T
Sbjct: 130 ISMALGHL--HQK-GIIYRDLKPENIMLNHQ--GHVKLTDFGLCKE--SIHDGTVTHT-- 180
Query: 630 SSIGINGTVGYVAPVII 646
GT+ Y+AP I+
Sbjct: 181 ----FCGTIEYMAPEIL 193
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 1e-05
Identities = 34/183 (18%), Positives = 68/183 (37%), Gaps = 42/183 (22%)
Query: 476 SKATNNFSPANKIREGGFNIVYN----------VAMKVANLKQKE------ASRSFAAEF 519
+A + +I EG + V+ VA+K ++ E R E
Sbjct: 7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR----EV 62
Query: 520 NALRNIR---HRNLIKIITICSSIDFEG-------FDF------KAISNGQLRLCNLSLT 563
LR++ H N++++ +C+ + F+ + + +
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDK--VPEPGVPTE 120
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623
++ + +++L H +VH DLKP NIL+ + D GLA+ Y ++
Sbjct: 121 TIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI-YSFQMAL 176
Query: 624 TAE 626
T+
Sbjct: 177 TSV 179
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
+A A+ YL H +IV+ DLKP NILLD H+ D GL K E +T T
Sbjct: 148 IASALGYL--HSL-NIVYRDLKPENILLDSQ--GHIVLTDFGLCK--ENIEHNSTTST-- 198
Query: 630 SSIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 199 ----FCGTPEYLAPEVL 211
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAE 626
A ++A + +L+ I++ DLK N++LD + H+ D G+ K G T +
Sbjct: 448 AAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSE--GHIKIADFGMCKE--NIWDGVTTK 500
Query: 627 TASSSIGINGTVGYVAPVII 646
T GT Y+AP II
Sbjct: 501 T------FCGTPDYIAPEII 514
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 2e-05
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 15/77 (19%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
+A A+++L H I++ DLKP NILLD++ H+ D GL+K + A +
Sbjct: 135 LALALDHL--H-SLGIIYRDLKPENILLDEE--GHIKLTDFGLSK--ESIDHEKKAYS-- 185
Query: 630 SSIGINGTVGYVAPVII 646
GTV Y+AP ++
Sbjct: 186 ----FCGTVEYMAPEVV 198
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 19/79 (24%)
Query: 575 AIEYLR------HHC-QPSIVHGDLKPSNILLDQDVVTH---VGDLGLAKFLYGYEPGTT 624
I ++ ++ Q +IVH DLKP NILL + D G+++
Sbjct: 133 VIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK---IGHACE 189
Query: 625 AETASSSIGINGTVGYVAP 643
I GT Y+AP
Sbjct: 190 LRE------IMGTPEYLAP 202
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 37/172 (21%), Positives = 60/172 (34%), Gaps = 57/172 (33%)
Query: 479 TNNFSPANKIREGGFNIVY---------NVAMK-VANLKQKE--ASRSFAAEFNALRNIR 526
+ + + I G + V VA+K + + + R E L +
Sbjct: 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR-EIAILNRLN 110
Query: 527 HRNLIKIITICSSIDFEGF------------DFKAI--SNGQLR-----------LCNLS 561
H +++K++ I D E F DFK + + L L
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLV--- 167
Query: 562 LTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
++Y+ H I+H DLKP+N L++QD V D GLA
Sbjct: 168 -------------GVKYV-HSA--GILHRDLKPANCLVNQDCSVKVCDFGLA 203
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 41/180 (22%)
Query: 476 SKATNNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIR 526
K + F +G F V +VA+K + +R L +
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQ-IMQDLAVLH 77
Query: 527 HRNLIKIITICSSIDFEGFD---------------FKAISNGQLRLCNLSLTQRVNIAID 571
H N++++ + ++ + N R I
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPP-------IL 130
Query: 572 VAF-------AIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGDLGLAKFLYGYEPGT 623
+ +I L H ++ H D+KP N+L++ D + D G AK L EP
Sbjct: 131 IKVFLFQLIRSIGCL-HLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV 189
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 14/77 (18%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
+ A+E+L H I++ D+K NILLD + HV D GL+K + + A
Sbjct: 168 IVLALEHL--HKL-GIIYRDIKLENILLDSN--GHVVLTDFGLSK-EFVADETERAYD-- 219
Query: 630 SSIGINGTVGYVAPVII 646
GT+ Y+AP I+
Sbjct: 220 ----FCGTIEYMAPDIV 232
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 33/163 (20%), Positives = 63/163 (38%), Gaps = 40/163 (24%)
Query: 487 KIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
KI GGF ++Y A V ++ +E F+ E + + ++ IK
Sbjct: 44 KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFS-ELKFYQRVAKKDCIKKWIER 102
Query: 538 SSIDFEGF--------------DFKAI-------SNGQLRLCN--LSLTQRVNIAIDVAF 574
+D+ G ++ + ++ N + + + I +
Sbjct: 103 KQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLD 162
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAK 614
+EY+ H VHGD+K +N+LL + D V ++ D GL+
Sbjct: 163 VLEYI-HEN--EYVHGDIKAANLLLGYKNPDQV-YLADYGLSY 201
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 2e-05
Identities = 28/125 (22%), Positives = 45/125 (36%), Gaps = 33/125 (26%)
Query: 499 VAMKV--ANLKQKEASRSFAAEFNALRNIR-----HRNLIKIITICSSIDFEG------- 544
VAMKV + E + E L+++R N ++ + G
Sbjct: 65 VAMKVVKSAEHYTETALD---EIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC 121
Query: 545 ----------FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKP 594
+ SN + L ++ I V ++YL H + I+H D+KP
Sbjct: 122 MVFEVLGHHLLKWIIKSNY--QGLPLPCVKK--IIQQVLQGLDYL--HTKCRIIHTDIKP 175
Query: 595 SNILL 599
NILL
Sbjct: 176 ENILL 180
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 15/77 (19%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
+ A+EYL H + +V+ D+K N++LD+D H+ D GL K G G T +T
Sbjct: 114 IVSALEYL--HSR-DVVYRDIKLENLMLDKD--GHIKITDFGLCK--EGISDGATMKT-- 164
Query: 630 SSIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 165 ----FCGTPEYLAPEVL 177
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 3e-05
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
++ A+ YL I++ DLK N+LLD + H+ D G+ K G PG T T
Sbjct: 119 ISLALNYLHER---GIIYRDLKLDNVLLDSE--GHIKLTDYGMCKE--GLRPGDTTST-- 169
Query: 630 SSIGINGTVGYVAPVII 646
GT Y+AP I+
Sbjct: 170 ----FCGTPNYIAPEIL 182
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 3e-05
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
++ A+ YL I++ DLK N+LLD + H+ D G+ K G PG T T
Sbjct: 162 ISLALNYLHER---GIIYRDLKLDNVLLDSE--GHIKLTDYGMCK--EGLRPGDTTST-- 212
Query: 630 SSIGINGTVGYVAPVII 646
GT Y+AP I+
Sbjct: 213 ----FCGTPNYIAPEIL 225
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 3e-05
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
V A++ + H +H D+KP N+LLD+ H+ D G + E +TA
Sbjct: 177 VVLALDAI--HSM-GFIHRDVKPDNMLLDKS--GHLKLADFGTCMKM-NKEGMVRCDTAV 230
Query: 630 SSIGINGTVGYVAPVIIAARNLENR 654
GT Y++P ++ ++ +
Sbjct: 231 ------GTPDYISPEVLKSQGGDGY 249
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 3e-05
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 14/81 (17%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
+ AI+ + H VH D+KP NIL+D + H+ D G L + A
Sbjct: 184 MVIAIDSV--HQL-HYVHRDIKPDNILMDMN--GHIRLADFGSCLKLMEDGTVQS-SVAV 237
Query: 630 SSIGINGTVGYVAPVIIAARN 650
GT Y++P I+ A
Sbjct: 238 ------GTPDYISPEILQAME 252
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 4e-05
Identities = 33/198 (16%), Positives = 60/198 (30%), Gaps = 57/198 (28%)
Query: 479 TNNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRN 529
+ +S + G F IV A+K + +R E + ++ + H N
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR----ELDIMKVLDHVN 61
Query: 530 LIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIA---------IDVAFAIEY-- 578
+IK++ + E + +L + + + +EY
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 579 ------LRH-----------HCQ---------------PSIVHGDLKPSNILLD-QDVVT 605
L+ I H D+KP N+L++ +D
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTL 181
Query: 606 HVGDLGLAKFLYGYEPGT 623
+ D G AK L EP
Sbjct: 182 KLCDFGSAKKLIPSEPSV 199
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 15/77 (19%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
+A + +L + I++ DLK N++LD + H+ D G+ K G T +T
Sbjct: 130 IAIGLFFL--QSK-GIIYRDLKLDNVMLDSE--GHIKIADFGMCK--ENIWDGVTTKT-- 180
Query: 630 SSIGINGTVGYVAPVII 646
GT Y+AP II
Sbjct: 181 ----FCGTPDYIAPEII 193
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 4e-05
Identities = 26/140 (18%), Positives = 53/140 (37%), Gaps = 11/140 (7%)
Query: 129 SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188
++ I +N FS K L ++L N + + L + L L
Sbjct: 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQ---GLRS---LNSL 85
Query: 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMESSQLIGT 247
N + L S ++ + + +N+I+ + ++L NLN L++ ++L T
Sbjct: 86 VLYGNKITELPKSLFEGLFS-LQLLLLNANKINC-LRVDAFQDLHNLNLLSLYDNKL-QT 142
Query: 248 IPPLIGET-PNLQLLNIGGN 266
I +Q +++ N
Sbjct: 143 IAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 7e-05
Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 8/138 (5%)
Query: 204 ANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMESSQLIGTIPP-LIGETPNLQLL 261
NL TI +I + N I IP G L + + ++Q+ + P +L L
Sbjct: 28 TNLPETITEIRLEQNTIKV-IPPGAFSPYKKLRRIDLSNNQI-SELAPDAFQGLRSLNSL 85
Query: 262 NIGGNHLQ---GSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLP 318
+ GN + S+ L +L L N + + + +L LS+ NKL + +
Sbjct: 86 VLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT-IA 144
Query: 319 QQILSVTTLSLYLELDNN 336
+ S + L N
Sbjct: 145 KGTFSPLRAIQTMHLAQN 162
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 5e-05
Identities = 38/175 (21%), Positives = 67/175 (38%), Gaps = 52/175 (29%)
Query: 479 TNNFSPANKIREGGFNIVYN---------VAMKVANL-KQKEASRSFAAEFNALRNIR-H 527
+++ K+ G ++ V+ V +K+ K+K+ R E L N+R
Sbjct: 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKR----EIKILENLRGG 90
Query: 528 RNLIKII-TICSSIDF---------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAF--- 574
N+I + + + DFK + +LT D+ F
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ--------TLTD-----YDIRFYMY 137
Query: 575 ----AIEYLRHHCQPSIVHGDLKPSNILLDQDVVT-HVGDLGLAKFLYGYEPGTT 624
A++Y I+H D+KP N+++D + + D GLA+F Y PG
Sbjct: 138 EILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF---YHPGQE 186
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 6e-05
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 15/77 (19%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
+ A+ +L H + I++ DLK N+LLD + H D G+ K G G T T
Sbjct: 133 IISALMFL--HDK-GIIYRDLKLDNVLLDHE--GHCKLADFGMCK--EGICNGVTTAT-- 183
Query: 630 SSIGINGTVGYVAPVII 646
GT Y+AP I+
Sbjct: 184 ----FCGTPDYIAPEIL 196
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 7e-05
Identities = 39/190 (20%), Positives = 71/190 (37%), Gaps = 55/190 (28%)
Query: 488 IREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICS 538
+ +G + IVY +A+K + S+ E ++++H+N+++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ------ 83
Query: 539 SIDFEGFDFKA---------ISNGQLRLC------NLSLTQRV--NIAIDVAFAIEYLRH 581
+ G + + G L L ++ + ++YL H
Sbjct: 84 ---YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL-H 139
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVG-----DLGLAKFLYGYEPGTTAETASSSIGING 636
Q IVH D+K N+L++ T+ G D G +K L A + G
Sbjct: 140 DNQ--IVHRDIKGDNVLIN----TYSGVLKISDFGTSKRL--------AGINPCTETFTG 185
Query: 637 TVGYVAPVII 646
T+ Y+AP II
Sbjct: 186 TLQYMAPEII 195
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 7e-05
Identities = 33/169 (19%), Positives = 54/169 (31%), Gaps = 51/169 (30%)
Query: 27 NNGFNG--EIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILT 84
+ ++ + L + + L LS N+ ++LS NL LS N +
Sbjct: 31 HGMIPPIEKMDATLSTLKACKHLALSTNNIEKI--SSLSGMENLRILSLGRNL-----IK 83
Query: 85 EICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGG 144
+I +L + +L L +++NQ SLS
Sbjct: 84 KIENLDAV----------------ADTLEELWISYNQIASLSG----------------- 110
Query: 145 VSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRN 193
+L NL L + N + I+ L KLE L N
Sbjct: 111 ----IEKLVNLRVLYMSNNKI-----TNWGEIDKLAALDKLEDLLLAGN 150
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
L+L + + VA +E+L +H DL NILL + V + D GLA+ +Y
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 244
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 34/170 (20%)
Query: 479 TNNFSPANKIREGGFNIVY--------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNL 530
++ I G F +V+ VA+K ++ +R E +R ++H N+
Sbjct: 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR----ELQIMRIVKHPNV 94
Query: 531 IKII-TICSSIDFEGFDF-------------KAISNGQLRLCNLSLTQRVNIAIDVAFAI 576
+ + S+ D + F +A + + + + ++
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 577 EYLRHHCQPSIVHGDLKPSNILLDQDVVTHV---GDLGLAKFLYGYEPGT 623
Y+ I H D+KP N+LLD + V D G AK L EP
Sbjct: 155 AYIHSI---GICHRDIKPQNLLLDPP--SGVLKLIDFGSAKILIAGEPNV 199
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 36/171 (21%), Positives = 62/171 (36%), Gaps = 35/171 (20%)
Query: 479 TNNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRN 529
+++ I G F +VY VA+K ++ +R E +R + H N
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCN 108
Query: 530 LIKII-TICSSIDFEGFDF-------------KAISNGQLRLCNLSLTQRVNIAIDVAFA 575
++++ SS + + + + + L + + +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 576 IEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV---GDLGLAKFLYGYEPGT 623
+ Y+ I H D+KP N+LLD D T V D G AK L EP
Sbjct: 169 LAYIHSF---GICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNV 214
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 15/77 (19%)
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETAS 629
+ +++L IV+ DLK NILLD+D H+ D G+ K T
Sbjct: 127 IILGLQFLHSK---GIVYRDLKLDNILLDKD--GHIKIADFGMCK--ENMLGDAKTNT-- 177
Query: 630 SSIGINGTVGYVAPVII 646
GT Y+AP I+
Sbjct: 178 ----FCGTPDYIAPEIL 190
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 12/69 (17%), Positives = 20/69 (28%), Gaps = 10/69 (14%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+ +A A + + PS + + D GD+ LA P
Sbjct: 132 IRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSID-----GDVVLAYP--ATMPDANP 181
Query: 626 ETASSSIGI 634
+ IG
Sbjct: 182 QDDIRGIGA 190
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 39/162 (24%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNL 530
NF KI G F + VA+K+ +K + F ++ L
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRF-------YKQL 61
Query: 531 IKIITICSSIDF--EGFDFKAI-------SNGQL-RLCN--LSLTQRVNIAIDVAFAIEY 578
I F G + A+ S L LC+ SL + IAI + +EY
Sbjct: 62 GSGDGIPQVYYFGPCG-KYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEY 120
Query: 579 LRHHCQPSIVHGDLKPSNILL------DQDVVTHVGDLGLAK 614
+ H ++++ D+KP N L+ Q V+ H+ D LAK
Sbjct: 121 V-HSK--NLIYRDVKPENFLIGRPGNKTQQVI-HIIDFALAK 158
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 44/192 (22%), Positives = 79/192 (41%), Gaps = 37/192 (19%)
Query: 115 LSLAFNQFLSLS---NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171
+L +S++ I + + L N+ +L LG N L
Sbjct: 24 ANLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQG--IQYLPNVRYLALGGNKLHD---- 77
Query: 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRN- 230
+ + LTN L L N + LP+ + + + +K++ + N++ S +P G+ +
Sbjct: 78 -ISALKELTN---LTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQS-LPDGVFDK 131
Query: 231 LVNLNWLTMESSQLIGTIPP-----LIGETPNLQLLNIGGNHLQGSI-------LSSLGN 278
L NL +L + +QL ++P L NL L++ N LQ S+ L+ L +
Sbjct: 132 LTNLTYLNLAHNQL-QSLPKGVFDKLT----NLTELDLSYNQLQ-SLPEGVFDKLTQLKD 185
Query: 279 LTLQTYLFNNLQ 290
L L N L+
Sbjct: 186 LRLYQ---NQLK 194
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 37/172 (21%), Positives = 57/172 (33%), Gaps = 57/172 (33%)
Query: 479 TNNFSPANKIREGGFNIVY---------NVAMK-VANL--KQKEASRSFAAEFNALRNIR 526
+N+ + I G + VY NVA+K V + + R E L ++
Sbjct: 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR-EITILNRLK 83
Query: 527 HRNLIKIITICSSIDFEGF------------DFKAI--SNGQLR-----------LCNLS 561
+I++ + D F D K + + L L
Sbjct: 84 SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLL--- 140
Query: 562 LTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
++ H I+H DLKP+N LL+QD V D GLA
Sbjct: 141 -------------GENFI-HES--GIIHRDLKPANCLLNQDCSVKVCDFGLA 176
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 10/66 (15%)
Query: 555 LRLCN---LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVG 608
L + LS + +A + A+E+L H VHG++ NI + DQ V +
Sbjct: 148 LDVSPKHVLSERSVLQVACRLLDALEFL-HEN--EYVHGNVTAENIFVDPEDQSQV-TLA 203
Query: 609 DLGLAK 614
G A
Sbjct: 204 GYGFAF 209
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 47/145 (32%)
Query: 522 LRNIRHRNLIKIITICSSIDFEGFD-------------FKAISNGQLR-----------L 557
L++ +H N+I I I FE F+ + IS L L
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 558 CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
A++ L H +++H DLKPSN+L++ + V D GLA+
Sbjct: 123 R----------------AVKVL-HGS--NVIHRDLKPSNLLINSNCDLKVCDFGLAR--- 160
Query: 618 GYEPGTTAETASSSIGINGTVGYVA 642
+ + + +VA
Sbjct: 161 IIDESAADNSEPTGQQSGMV-EFVA 184
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 3e-04
Identities = 36/158 (22%), Positives = 60/158 (37%), Gaps = 31/158 (19%)
Query: 479 TNNFSPANKIREGGFNIVY---------NVAMKVANLKQKE--ASRSFAAEFNALRNIRH 527
++ + I EG + +V VA+K + + + R+ E L RH
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRH 84
Query: 528 RNLIKIITICSSIDFEGF------------DFKAISNGQLRLCNLSLTQRVNIAIDVAFA 575
N+I I I + E D + Q +LS +
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRG 140
Query: 576 IEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
++Y+ H +++H DLKPSN+LL+ + D GLA
Sbjct: 141 LKYI-HSA--NVLHRDLKPSNLLLNTTCDLKICDFGLA 175
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 39/161 (24%), Positives = 56/161 (34%), Gaps = 38/161 (23%)
Query: 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFN 191
+++ NQ + F L NL L LG N LG+ D LT L L
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFD---SLTQ---LTVLDLG 96
Query: 192 RNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMESSQLIGTIPP 250
N Q+ + +P + LV+L L M ++L +P
Sbjct: 97 TN------------------QL--------TVLPSAVFDRLVHLKELFMCCNKL-TELPR 129
Query: 251 LIGETPNLQLLNIGGNHLQG---SILSSLGNLTLQTYLFNN 288
I +L L + N L+ L +LT YLF N
Sbjct: 130 GIERLTHLTHLALDQNQLKSIPHGAFDRLSSLT-HAYLFGN 169
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 28/165 (16%), Positives = 50/165 (30%), Gaps = 41/165 (24%)
Query: 487 KIREGGFNIVY--------NVAMK--VANLKQKEASRSFAAEFNALRNIRHRNLIKIITI 536
I +GGF +Y +V + + E + I+
Sbjct: 42 PIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIR 101
Query: 537 CSSIDFEG------FDFKAISNGQ----------------LRLCN--LSLTQRVNIAIDV 572
+ + G + S + +++ +
Sbjct: 102 TRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRI 161
Query: 573 AFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAK 614
+EY+ H VHGD+K SN+LL + D V ++ D GLA
Sbjct: 162 LDILEYI-HEH--EYVHGDIKASNLLLNYKNPDQV-YLVDYGLAY 202
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 11/120 (9%)
Query: 149 FSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSS 208
F +L L +N N + + + + + N E V L S
Sbjct: 53 FKKLPQLRKINFSNNKITDIEEGAFE---GASG---VNEILLTSNRLENVQHKMFKGLES 106
Query: 209 TIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMESSQLIGTIPPLIGET-PNLQLLNIGGN 266
+K + + SNRI+ + + L ++ L++ +Q+ T+ P +T +L LN+ N
Sbjct: 107 -LKTLMLRSNRITC-VGNDSFIGLSSVRLLSLYDNQI-TTVAPGAFDTLHSLSTLNLLAN 163
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 17/89 (19%)
Query: 568 IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
+ + + A+ YL + ++H D+KPSNILLD+ G + L F G +
Sbjct: 129 MTVAIVKALYYL--KEKHGVIHRDVKPSNILLDER-----GQIKLCDF------GISGRL 175
Query: 628 ASSSIGINGTVG---YVAPVIIAARNLEN 653
+ + G Y+AP I +
Sbjct: 176 -VDDKAKDRSAGCAAYMAPERIDPPDPTK 203
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 27/171 (15%), Positives = 50/171 (29%), Gaps = 46/171 (26%)
Query: 479 TNNFSPANKIREGGFNIVY--------NVAMK--VANLKQKEASRSFAAEFNALRNIR-- 526
+ ++ I G + V VA+K + + F R +R
Sbjct: 21 QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI 80
Query: 527 -------HRNLIKIITICSSIDFEGFD-------------FKAISNGQLRL----CNLSL 562
H N++ + I + + I + ++ + +
Sbjct: 81 RLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFM 140
Query: 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+ + L H +VH DL P NILL + + D LA
Sbjct: 141 YHILL-------GLHVL-HEAG--VVHRDLHPGNILLADNNDITICDFNLA 181
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 Length = 264 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 9/47 (19%), Positives = 15/47 (31%), Gaps = 4/47 (8%)
Query: 571 DVAFAIEYLRHHC----QPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
A L+ + HGD NI+++ + D G
Sbjct: 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRL 212
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* Length = 263 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 5e-04
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 571 DVAFAIEYLRHH---CQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
D ++L+ + HGDL SNI + V+ DLG +
Sbjct: 166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 5e-04
Identities = 41/193 (21%), Positives = 60/193 (31%), Gaps = 55/193 (28%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASRSFAA-------EFNALRNIRHR--NLI 531
GGF VY VA+K K + + E L+ + +I
Sbjct: 53 SGGFGSVYSGIRVSDNLPVAIKHVE-KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 111
Query: 532 KIITICSSIDF------------EGFDFKAISNGQL--RLCNLSLTQRVNIAIDVAFAIE 577
+++ D + FDF G L L Q V A+
Sbjct: 112 RLLDWFERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQ-------VLEAVR 163
Query: 578 YLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF-LYGYEPGTTAETASSSIGING 636
+ H+C ++H D+K NIL+D + G+L L F T G
Sbjct: 164 HC-HNC--GVLHRDIKDENILIDLN----RGELKLIDFGSGALLKDTVYTDFD------G 210
Query: 637 TVGYVAPVIIAAR 649
T Y P I
Sbjct: 211 TRVYSPPEWIRYH 223
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 61/392 (15%), Positives = 124/392 (31%), Gaps = 99/392 (25%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLI-----SLERLILSNNSFSCAIPANLSSG-----SNLI 69
+ ++L N ++ + S+ L LS NS L +N+
Sbjct: 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83
Query: 70 KLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNAS 129
L+ N L E+ +
Sbjct: 84 SLNLSGNFLSYKSSDELVKTLA----------------------------------AIPF 109
Query: 130 SLEMIEFSRNQFS-GGVSVDFSRLKN----LSWLNLGVNNLGSGTANELDFINLLTNCSK 184
++ +++ N FS S N ++ LNL N+LG +++EL L +
Sbjct: 110 TITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL-IQILAAIPAN 168
Query: 185 LERLYFNRNGF--EGV--LPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTME 240
+ L N + L +A++ +++ + + +N + L +
Sbjct: 169 VNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLK---SYAELAYI------ 219
Query: 241 SSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLG-----NLTLQT-YLFNNLQGNIP 294
++ LN+ N L G L +L LQT YL ++ N+
Sbjct: 220 ----------FSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMS 269
Query: 295 --------SSLANCKSLLGLSVSHNKLTSTLPQQIL-SVTTLSLYLELDNNLLNGSLPPE 345
++ N + ++ + + ++ + I + LS ++ +LLN L
Sbjct: 270 KEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPISNLIRELSGKADV-PSLLNQCLIFA 328
Query: 346 VGNLKNLLRLHIPEYPENLSFFEL--LNLSYN 375
+ N+ L+IP+ EL +
Sbjct: 329 QKHQTNIEDLNIPD--------ELRESIQTCK 352
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 5e-04
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 17/79 (21%)
Query: 568 IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
IA+ + A+E+L H + S++H D+KPSN+L++ G + + F G +
Sbjct: 114 IAVSIVKALEHL--HSKLSVIHRDVKPSNVLINAL-----GQVKMCDF------GISGY- 159
Query: 628 ASSSIGIN---GTVGYVAP 643
+ + G Y+AP
Sbjct: 160 LVDDVAKDIDAGCKPYMAP 178
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 5e-04
Identities = 27/195 (13%), Positives = 48/195 (24%), Gaps = 60/195 (30%)
Query: 478 ATNNFSPANKIREGGFNIVY-------NVAMKV--------ANLKQKEASRSFAAEFNAL 522
T KI EG F V+ VA+K+ N ++ E
Sbjct: 18 PTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIIS 77
Query: 523 RNI---------RHRNLIKIITIC------------------SSIDFEGFDFKAISNGQL 555
+ + R I + ++ S+ + QL
Sbjct: 78 KELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQL 137
Query: 556 RLC----------------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+ SL +I + ++ H DL N+LL
Sbjct: 138 FIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAV--AEASLRFEHRDLHWGNVLL 195
Query: 600 DQDVVTHVGDLGLAK 614
+ + + K
Sbjct: 196 KKTSLKKLHYTLNGK 210
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV-------G 639
++H D+KPSNILL+ + V D GL++ T S +
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 640 YVA 642
YVA
Sbjct: 190 YVA 192
|
| >4fev_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, PP1, protein kinase inhibitor; HET: KAN PP1; 1.89A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4ej7_A* 3r78_A* Length = 272 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 6e-04
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+ HGD N++ D+ + D+G
Sbjct: 192 DSVVTHGDFSLDNLIFDEGKLIGCIDVGRV 221
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 8e-04
Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 14/76 (18%)
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF-LYGYEPGTTAETASSSIG 633
AI++ H +VH D+K NIL+D G L F
Sbjct: 151 AIQHC-HSR--GVVHRDIKDENILID----LRRGCAKLIDFGSGALLHDEPYTDFD---- 199
Query: 634 INGTVGYVAPVIIAAR 649
GT Y P I+
Sbjct: 200 --GTRVYSPPEWISRH 213
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 9e-04
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 18/82 (21%)
Query: 568 IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
I + A+ +L I+H D+KPSNILLD+ G++ L F G + +
Sbjct: 130 ITLATVKALNHL--KENLKIIHRDIKPSNILLDRS-----GNIKLCDF------GISGQ- 175
Query: 628 ASSSIGINGTVG---YVAP-VI 645
SI G Y+AP I
Sbjct: 176 LVDSIAKTRDAGCRPYMAPERI 197
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 746 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.98 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.98 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.98 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.98 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.98 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.98 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.98 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.98 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.98 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.98 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.98 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.98 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.98 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.98 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.98 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.98 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.98 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.98 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.98 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.98 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.98 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.98 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.98 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.98 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.98 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.98 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.98 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.98 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.98 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.98 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.98 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.98 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.97 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.97 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.97 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.97 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.97 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.97 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.97 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.97 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.97 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.97 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.97 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.97 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.97 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.97 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.97 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.97 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.97 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.97 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.97 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.97 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.97 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.97 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.97 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.97 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.97 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.97 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.97 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.97 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.97 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.97 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.97 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.97 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.97 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.97 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.97 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.97 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.97 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.97 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.97 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.97 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.97 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.97 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.97 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.97 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.97 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.97 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.97 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.97 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.97 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.97 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.97 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.97 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.97 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.97 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.97 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.97 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.97 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.97 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.97 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.97 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.97 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.97 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.97 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.97 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.97 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.97 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.97 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.97 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.97 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.97 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.97 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.97 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.97 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.97 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.97 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.97 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.97 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.97 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.97 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.97 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.97 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.97 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.97 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.97 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.97 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.97 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.97 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.97 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.97 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.97 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.97 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.97 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.97 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.97 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.97 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.97 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.97 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.97 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.97 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.97 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.97 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.97 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.97 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.97 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.97 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.97 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.97 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.97 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.97 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.97 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.97 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.97 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.97 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.97 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.97 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.97 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.97 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.97 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.97 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.97 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.97 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.97 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.97 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.97 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.97 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.96 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.96 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.96 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.96 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.96 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.96 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.96 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.96 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.96 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.96 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.96 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.96 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.96 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.96 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.96 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.96 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.96 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.96 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.96 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.96 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.96 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.96 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.96 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.95 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.95 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.95 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.95 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.95 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.95 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.95 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.95 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.94 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.94 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.94 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.94 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.94 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.94 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.94 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.94 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.94 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.93 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.93 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.92 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.92 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.91 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.91 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.91 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.91 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.9 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.9 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.9 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.9 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.89 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.89 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.89 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.89 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.88 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.88 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.88 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.88 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.87 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.87 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.87 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.87 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.86 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.86 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.86 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.85 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.85 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.85 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.84 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.84 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.83 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.82 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.81 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.8 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.8 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.79 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.78 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.77 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.77 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.77 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.77 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.76 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.76 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.75 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.75 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.74 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.74 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.73 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.73 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.73 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.73 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.73 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.7 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.69 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.67 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.65 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.64 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.63 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.63 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.61 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.6 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.59 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.57 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.57 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.56 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.55 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.54 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.51 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.51 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.5 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.45 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.45 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.44 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.41 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.39 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.39 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.38 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.37 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.35 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.3 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.19 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.17 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.15 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.14 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 99.03 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.98 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.95 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.85 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.8 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.75 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 98.64 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 98.6 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.48 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.43 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.35 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.33 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.31 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.31 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.16 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.92 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 97.92 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.9 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.62 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.44 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.42 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.21 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.13 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.09 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.85 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.8 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 96.61 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 96.51 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.5 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.5 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 96.49 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.4 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 95.36 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 95.31 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 95.21 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 95.09 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 94.3 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 93.65 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 91.35 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 88.34 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 86.46 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-50 Score=472.86 Aligned_cols=387 Identities=28% Similarity=0.419 Sum_probs=302.0
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCcc-ccCCCCCCeeeCcCCCCCCccchhhcCCC-CCCEE
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPAN-LSSGSNLIKLSTDSNNLVRDILTEICSLF-KLERL 95 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L 95 (746)
++|++|+|++|.+++.+|..|+++++|++|+|++|++++.+|.. |.++++|++|++++|.+.+.+|..+.+++ +|+.|
T Consensus 294 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L 373 (768)
T 3rgz_A 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTL 373 (768)
T ss_dssp TTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEE
T ss_pred CcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEE
Confidence 55555555555555555555555555555555555555555544 55555555555555555555555555554 56666
Q ss_pred EccCCCC----cCcccC--CCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCC
Q 041467 96 RIDCGGR----IDSLGH--LKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNN 164 (746)
Q Consensus 96 ~l~~~~~----~~~~~~--l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 164 (746)
+++.|.. +..+.. +++|+.|++++|++. .+.++++|+.|+|++|++++.+|..|+.+++|++|+|++|.
T Consensus 374 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~ 453 (768)
T 3rgz_A 374 DLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453 (768)
T ss_dssp ECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred EccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCc
Confidence 5555432 223333 567777777777773 45677888888888888888888888888888888888888
Q ss_pred CCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccc
Q 041467 165 LGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQL 244 (746)
Q Consensus 165 l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l 244 (746)
+++ .+|..+..+++|++|++++|++++.+|..+..++ +|++|++++|++++.+|.+|+++++|++|+|++|++
T Consensus 454 l~~------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 526 (768)
T 3rgz_A 454 LEG------EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT-NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 526 (768)
T ss_dssp CCS------CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred ccC------cCCHHHcCCCCceEEEecCCcccCcCCHHHhcCC-CCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcc
Confidence 876 4667788888999999999999888888888887 799999999999988999999999999999999999
Q ss_pred eecCCcCCCCCCCCceeecccccccccccccccccChH------------------------------------------
Q 041467 245 IGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQ------------------------------------------ 282 (746)
Q Consensus 245 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l------------------------------------------ 282 (746)
.+.+|..++++++|++|+|++|+++|.+|..+.....+
T Consensus 527 ~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (768)
T 3rgz_A 527 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNR 606 (768)
T ss_dssp EEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGG
T ss_pred cCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhc
Confidence 98899999999999999999999988888765442211
Q ss_pred -------HhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCcee
Q 041467 283 -------TYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRL 355 (746)
Q Consensus 283 -------~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L 355 (746)
.+..|.+.|.+|..|+.+++|+.|||++|+++|.+|.+++.++.| +.|+|++|+++|.+|..++++++|+.|
T Consensus 607 l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L-~~L~Ls~N~l~g~ip~~l~~L~~L~~L 685 (768)
T 3rgz_A 607 LSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYL-FILNLGHNDISGSIPDEVGDLRGLNIL 685 (768)
T ss_dssp GGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTC-CEEECCSSCCCSCCCGGGGGCTTCCEE
T ss_pred cccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccC-CEEeCcCCccCCCCChHHhCCCCCCEE
Confidence 111366777888889999999999999999999999999999999 689999999999999999999999999
Q ss_pred ec---------CCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCCcCCCCCCCCCCccCCC
Q 041467 356 HI---------PEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYK 416 (746)
Q Consensus 356 ~l---------p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~~~~~~~~~~~~~ 416 (746)
++ |..+..+++|+.||+|+|+++|.+|..+.+.++....+.||+++||.. ++.|...
T Consensus 686 dLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~----l~~C~~~ 751 (768)
T 3rgz_A 686 DLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP----LPRCDPS 751 (768)
T ss_dssp ECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT----SCCCCSC
T ss_pred ECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC----CcCCCCC
Confidence 64 677889999999999999999999999899999999999999999973 3467643
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=443.42 Aligned_cols=387 Identities=26% Similarity=0.425 Sum_probs=230.1
Q ss_pred ccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCC-CCC
Q 041467 14 CILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSL-FKL 92 (746)
Q Consensus 14 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L 92 (746)
+..+++|++|+|++|.+++.+|..|+++++|++|+|++|++++.+|.. .+++|++|+|++|.+.+.+|..+..+ ++|
T Consensus 219 l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L 296 (768)
T 3rgz_A 219 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTL 296 (768)
T ss_dssp CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTC
T ss_pred cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcC
Confidence 444566666666666666666666666666666666666665544443 45555555555555555555555554 666
Q ss_pred CEEEccCCC----CcCcccCCCCCCEEeccCCCcc------cccCCCCCcEeeCccCcccccCCccccCCC-CCCEEEcc
Q 041467 93 ERLRIDCGG----RIDSLGHLKSLLLLSLAFNQFL------SLSNASSLEMIEFSRNQFSGGVSVDFSRLK-NLSWLNLG 161 (746)
Q Consensus 93 ~~L~l~~~~----~~~~~~~l~~L~~L~Ls~N~l~------~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls 161 (746)
++|+++.+. .+..++++++|+.|+|++|++. .+.++++|++|+|++|++++.+|..+..++ +|++|+|+
T Consensus 297 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls 376 (768)
T 3rgz_A 297 TGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLS 376 (768)
T ss_dssp SEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECC
T ss_pred CEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEcc
Confidence 666666542 2245666666666666666653 145566666666666666666666665554 56666666
Q ss_pred CCCCCCCCCCCc--------------------cccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCccc
Q 041467 162 VNNLGSGTANEL--------------------DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRIS 221 (746)
Q Consensus 162 ~N~l~~~~~~~~--------------------~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~ 221 (746)
+|.+++..+..+ .+|..+.++++|+.|+|++|++++.+|..+..++ +|+.|++++|+++
T Consensus 377 ~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~n~l~ 455 (768)
T 3rgz_A 377 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLNMLE 455 (768)
T ss_dssp SSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT-TCCEEECCSSCCC
T ss_pred CCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCC-CCCEEECCCCccc
Confidence 665543111100 2344555666666666666666666666666665 5666666666666
Q ss_pred ccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccCh---HHhhhccCCCCCCcccc
Q 041467 222 STIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTL---QTYLFNNLQGNIPSSLA 298 (746)
Q Consensus 222 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~---l~~l~n~l~~~~p~~~~ 298 (746)
+.+|..|+.+++|++|++++|++.+.+|..++++++|++|+|++|++++.+|..++.++. +++.+|++.|.+|..++
T Consensus 456 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 535 (768)
T 3rgz_A 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG 535 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGG
T ss_pred CcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHc
Confidence 666666666666666666666666666666666666666666666666666655544333 33335666666666666
Q ss_pred CCCCCCeeeecCCcCccccchhhhhc------------------------------------------------------
Q 041467 299 NCKSLLGLSVSHNKLTSTLPQQILSV------------------------------------------------------ 324 (746)
Q Consensus 299 ~l~~L~~L~Ls~N~l~~~~p~~~~~l------------------------------------------------------ 324 (746)
.+++|+.|++++|+++|.+|..++..
T Consensus 536 ~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 615 (768)
T 3rgz_A 536 DCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNI 615 (768)
T ss_dssp GCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCT
T ss_pred CCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcccccccccc
Confidence 66666666666666666666554331
Q ss_pred ----------------ccccceEEccCccccccCchhhhcccCCceee---------cCCCCCCCCCCCEEEccCCcCcc
Q 041467 325 ----------------TTLSLYLELDNNLLNGSLPPEVGNLKNLLRLH---------IPEYPENLSFFELLNLSYNYFGS 379 (746)
Q Consensus 325 ----------------~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~---------lp~~~~~l~~L~~L~ls~N~l~~ 379 (746)
..+ ++|||++|+++|.+|.++++++.|+.|+ +|..++.++.|+.||||+|+++|
T Consensus 616 ~~~~~~g~~~~~~~~l~~L-~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g 694 (768)
T 3rgz_A 616 TSRVYGGHTSPTFDNNGSM-MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDG 694 (768)
T ss_dssp TSCEEEEECCCSCSSSBCC-CEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEE
T ss_pred ccceecccCchhhhccccc-cEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccC
Confidence 223 3566666666666666666666666663 34555666666666666666666
Q ss_pred cCCCC-CccCCCCeeeEecCCCcCCCC
Q 041467 380 EVPTK-GVFNNKTRFSIIGNGKLCGGL 405 (746)
Q Consensus 380 ~~p~~-~~~~~~~~~~~~~n~~l~~~~ 405 (746)
.+|.. ..+..+..+++.+| .+.|.+
T Consensus 695 ~ip~~l~~l~~L~~L~ls~N-~l~g~i 720 (768)
T 3rgz_A 695 RIPQAMSALTMLTEIDLSNN-NLSGPI 720 (768)
T ss_dssp CCCGGGGGCCCCSEEECCSS-EEEEEC
T ss_pred cCChHHhCCCCCCEEECcCC-cccccC
Confidence 66642 23445555555544 344443
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=381.94 Aligned_cols=231 Identities=20% Similarity=0.244 Sum_probs=175.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
..++++..+.||+|+||+||+ ||||+++.. ..+..+.|.+|+++|++++|||||+++|+|.+ +..++||||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 346778889999999999998 899998643 23456789999999999999999999998865 568999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|++|+|. ...++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+.......
T Consensus 113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~-- 187 (307)
T 3omv_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-- 187 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCc--
Confidence 9999986 34699999999999999999999999 999999999999999999999999999987643221
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeeccc-----cc------cccchhhc-c--c---cCC
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE-----KK------QNKSILKS-A--G---IKG 686 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~-----~~------~~~~i~~~-~--~---~~~ 686 (746)
.......+||+.|||||++.+.....++.++|||||||++|... +. ....+... . + ...
T Consensus 188 ----~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~ 263 (307)
T 3omv_A 188 ----SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLY 263 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSC
T ss_pred ----ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCccccc
Confidence 12234578999999999998665444566799999999999111 11 11111111 1 1 112
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
..+.+.+..++..|+...|+ ||++.++...++
T Consensus 264 ~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 264 KNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp TTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 34556677777777777787 899887665444
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=377.97 Aligned_cols=178 Identities=22% Similarity=0.339 Sum_probs=158.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||+||+ ||||++.+.. ....+.+.+|+++|++++|||||++++++.+.+..|+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35799999999999999997 9999987543 34457799999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||||++|+|. ...+++.+++.++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+.....
T Consensus 111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999996 46799999999999999999999999 999999999999999999999999999998743322
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+.+||+.|||||++.+..|+.+ +||||+||++|
T Consensus 188 ------~~~~~~~~GTp~YmAPEvl~~~~y~~~---~DiWSlGvily 225 (311)
T 4aw0_A 188 ------QARANSFVGTAQYVSPELLTEKSACKS---SDLWALGCIIY 225 (311)
T ss_dssp ------CCCBCCCCSCGGGCCHHHHHHSCBCHH---HHHHHHHHHHH
T ss_pred ------cccccCcccCcccCCHHHHcCCCCCcH---HHHHHHHHHHH
Confidence 123345899999999999998887655 99999999999
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=384.58 Aligned_cols=176 Identities=20% Similarity=0.260 Sum_probs=158.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
...|+..+.||+|+||+||+ ||||++........+.+.+|+++|++++|||||+++++|.+.+..|+||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 35689999999999999997 999999776655666789999999999999999999999999999999999
Q ss_pred ccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 550 ISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 550 ~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
|++|+|. ...+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 153 ~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~----- 224 (346)
T 4fih_A 153 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV----- 224 (346)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-----
T ss_pred CCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC-----
Confidence 9999986 56799999999999999999999999 99999999999999999999999999998764322
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.+||+.|||||++.+..|+. ++||||+||++|
T Consensus 225 ---~~~~~~~GTp~YmAPEvl~~~~y~~---~~DiWSlGvily 261 (346)
T 4fih_A 225 ---PRRKSLVGTPYWMAPELISRLPYGP---EVDIWSLGIMVI 261 (346)
T ss_dssp ---CCBCCCCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred ---CcccccccCcCcCCHHHHCCCCCCc---HHHHHHHHHHHH
Confidence 2234578999999999998887755 599999999999
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-46 Score=384.76 Aligned_cols=230 Identities=22% Similarity=0.289 Sum_probs=184.3
Q ss_pred cCCCCCCeEeecCCeeEEE--------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
++|...+.||+|+||+||+ ||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 5678889999999999996 89999976656667889999999999999999999999999999999
Q ss_pred hhhhccCCccc------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEE
Q 041467 546 DFKAISNGQLR------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV 607 (746)
Q Consensus 546 v~e~~~~g~l~------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki 607 (746)
|||||++|+|. ...++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 99999999996 13589999999999999999999999 9999999999999999999999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--ccc------ccc--
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQ------NKS-- 677 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~------~~~-- 677 (746)
+|||+|+....... .......+||+.|||||++.+..|+.+ +|||||||++|... ... ..+
T Consensus 170 ~DFGla~~~~~~~~------~~~~~~~~gt~~ymAPE~~~~~~~~~k---~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~ 240 (299)
T 4asz_A 170 GDFGMSRDVYSTDY------YRVGGHTMLPIRWMPPESIMYRKFTTE---SDVWSLGVVLWEIFTYGKQPWYQLSNNEVI 240 (299)
T ss_dssp CCCSCHHHHTGGGC------EEETTTEEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred CCcccceecCCCCc------eeecCceecChhhcCHHHHcCCCCCch---hhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999987643211 112234679999999999998888665 99999999999221 111 011
Q ss_pred --hhh-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 678 --ILK-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 678 --i~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
+.. ..+..+..+.+.+..++..||...|+ ||++.++...++.+.
T Consensus 241 ~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 241 ECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 111 11223345666777888888888888 999998877766554
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=385.15 Aligned_cols=229 Identities=21% Similarity=0.253 Sum_probs=178.5
Q ss_pred cCCCCCCeEeecCCeeEEE--------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
++|...+.||+|+||+||+ ||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 4667788999999999996 89999976666667889999999999999999999999999999999
Q ss_pred hhhhccCCccc--------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcE
Q 041467 546 DFKAISNGQLR--------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605 (746)
Q Consensus 546 v~e~~~~g~l~--------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 605 (746)
|||||++|+|. ...++|.+++.|+.|||+||+|||+. +||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 99999999985 13589999999999999999999999 99999999999999999999
Q ss_pred EEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc--cc---------
Q 041467 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQ--------- 674 (746)
Q Consensus 606 ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~--------- 674 (746)
||+|||+|+.+..... .......+||+.|||||++.+..++.+ +|||||||++|.... ..
T Consensus 198 Ki~DFGla~~~~~~~~------~~~~~~~~gt~~ymAPE~~~~~~~~~~---sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~ 268 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDY------YRVGGRTMLPIRWMPPESILYRKFTTE---SDVWSFGVVLWEIFTYGKQPWYQLSNTE 268 (329)
T ss_dssp EECCCC----------------------CCCCGGGCCHHHHTTCCCCHH---HHHHHHHHHHHHHHTTSCCTTCSSCHHH
T ss_pred EEcccccceeccCCCc------ceecCcccccccccChhhhcCCCCCcc---ccccchHHHHHHHHcCCCCCCCCCCHHH
Confidence 9999999987643221 112234679999999999999888665 999999999992211 11
Q ss_pred -ccchhh-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 675 -NKSILK-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 675 -~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
...+.. ..+..+..+.+.+..++..||...|+ ||++.++...++.+
T Consensus 269 ~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l 317 (329)
T 4aoj_A 269 AIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317 (329)
T ss_dssp HHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 111111 11222345667788888888888888 99999887666554
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-45 Score=383.24 Aligned_cols=177 Identities=20% Similarity=0.303 Sum_probs=150.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||+||+ ||||++.... ....+.+.+|+++|++++|||||++++++.+.+..|+|
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 357899999999999999997 9999986542 34466799999999999999999999999999999999
Q ss_pred hhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 547 FKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 547 ~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||++|+|. ...+++.+++.|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~- 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS- 177 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH-
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC-
Confidence 9999999985 23468999999999999999999999 999999999999999999999999999987521
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+.+||+.|||||++.+..|+.+ +||||+||++|
T Consensus 178 -------~~~~~~~~~GT~~YmAPE~l~~~~y~~~---~DiwSlGvily 216 (350)
T 4b9d_A 178 -------TVELARACIGTPYYLSPEICENKPYNNK---SDIWALGCVLY 216 (350)
T ss_dssp -------HHHHHHHHHSCCTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred -------CcccccccCCCccccCHHHHCCCCCCcH---HHHHHHHHHHH
Confidence 1122345789999999999998887655 99999999999
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=375.95 Aligned_cols=227 Identities=20% Similarity=0.225 Sum_probs=180.3
Q ss_pred CCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 481 NFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
++...+.||+|+||+||+ ||||+++... ....++|.+|+.++++++|||||+++|+|.+.+..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 456678999999999996 8999986543 3345789999999999999999999999999999999
Q ss_pred hhhhccCCccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 546 DFKAISNGQLR---------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 546 v~e~~~~g~l~---------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
|||||++|+|. ...++|.++..|+.|||+||+|||++ +||||||||+||||++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 99999999985 12489999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc--cc------cc
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQ------NK 676 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~------~~ 676 (746)
+||+|||+|+.+..... .......+||+.|||||++.+..|+.+ +|||||||++|.... .. ..
T Consensus 184 ~Ki~DFGlar~~~~~~~------~~~~~~~~gt~~ymAPE~l~~~~~s~k---sDVwSfGvvl~El~t~g~~Pf~~~~~~ 254 (308)
T 4gt4_A 184 VKISDLGLFREVYAADY------YKLLGNSLLPIRWMAPEAIMYGKFSID---SDIWSYGVVLWEVFSYGLQPYCGYSNQ 254 (308)
T ss_dssp EEECCSCCBCGGGGGGC------BCSSSSSCBCGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTTCCTTTTCCHH
T ss_pred EEECCcccceeccCCCc------eeEecccccCCcccCHHHHhCCCCCcc---chhhhHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999987643221 122334689999999999998887665 999999999992211 11 01
Q ss_pred c----hhh-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 677 S----ILK-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 677 ~----i~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
. +.. ......+.+.+.+..++..||...|+ ||++.++...++.
T Consensus 255 ~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 255 DVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 1 111 11122345667788888888888888 9999887765543
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=398.99 Aligned_cols=375 Identities=18% Similarity=0.224 Sum_probs=322.9
Q ss_pred cCccccccccccEEecccCcCcccCchhhhCCccCcEEecccC-------------------------------------
Q 041467 10 SKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNN------------------------------------- 52 (746)
Q Consensus 10 ~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N------------------------------------- 52 (746)
....|....+++.|+|++|.++|.+|++|++|++|++|+|++|
T Consensus 73 ~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~ 152 (636)
T 4eco_A 73 PGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDY 152 (636)
T ss_dssp TTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCC
T ss_pred CCeEEcCCCCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhcc
Confidence 4444544468999999999999999999999999999999998
Q ss_pred -----------------------------------------cCCccCCccccCCCCCCeeeCcCCCCCCc----------
Q 041467 53 -----------------------------------------SFSCAIPANLSSGSNLIKLSTDSNNLVRD---------- 81 (746)
Q Consensus 53 -----------------------------------------~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---------- 81 (746)
++++ +|..|+++++|++|+|++|.+.+.
T Consensus 153 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~ 231 (636)
T 4eco_A 153 DPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENEN 231 (636)
T ss_dssp CGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTT
T ss_pred CchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccc
Confidence 4445 889999999999999999999886
Q ss_pred -------cchhhc--CCCCCCEEEccCCC----CcCcccCCCCCCEEeccCCC-ccc------ccCC------CCCcEee
Q 041467 82 -------ILTEIC--SLFKLERLRIDCGG----RIDSLGHLKSLLLLSLAFNQ-FLS------LSNA------SSLEMIE 135 (746)
Q Consensus 82 -------~~~~~~--~l~~L~~L~l~~~~----~~~~~~~l~~L~~L~Ls~N~-l~~------l~~l------~~L~~L~ 135 (746)
+|..++ ++++|++|+++.|. .+..++++++|+.|+|++|+ +.. +.++ ++|+.|+
T Consensus 232 ~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~ 311 (636)
T 4eco_A 232 SEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIY 311 (636)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEE
T ss_pred cchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEE
Confidence 999999 99999999999864 34678999999999999998 643 3344 8999999
Q ss_pred CccCcccccCCc--cccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccc-cce
Q 041467 136 FSRNQFSGGVSV--DFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSST-IKQ 212 (746)
Q Consensus 136 Ls~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~-L~~ 212 (746)
|++|+++ .+|. .|+.+++|++|+|++|.+++ .+| .+..+++|+.|++++|+++ .+|..+..+. + |+.
T Consensus 312 L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g------~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~-~~L~~ 381 (636)
T 4eco_A 312 IGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEG------KLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFT-EQVEN 381 (636)
T ss_dssp CCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEE------ECC-CCEEEEEESEEECCSSEEE-ECCTTSEEEC-TTCCE
T ss_pred CCCCcCC-ccCchhhhccCCCCCEEeCcCCcCcc------chh-hhCCCCCCCEEECCCCccc-cccHhhhhhc-ccCcE
Confidence 9999999 7787 89999999999999999986 456 6888999999999999998 8899999997 6 999
Q ss_pred EEcccCcccccCCccccCCC--CCCeeecccccceecCCcCCC-------CCCCCceeeccccccccccccc---ccccC
Q 041467 213 IAMGSNRISSTIPHGIRNLV--NLNWLTMESSQLIGTIPPLIG-------ETPNLQLLNIGGNHLQGSILSS---LGNLT 280 (746)
Q Consensus 213 L~l~~N~i~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~~~~---l~~l~ 280 (746)
|++++|+++ .+|..+..+. +|++|++++|++.+.+|..|. .+++|++|+|++|++++..+.. +.+|+
T Consensus 382 L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~ 460 (636)
T 4eco_A 382 LSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLS 460 (636)
T ss_dssp EECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCS
T ss_pred EEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCC
Confidence 999999999 7899888765 899999999999999999998 8889999999999999544433 45677
Q ss_pred hHHhhhccCCCCCCcc-ccCC-------CCCCeeeecCCcCccccchhhh--hcccccceEEccCccccccCchhhhccc
Q 041467 281 LQTYLFNNLQGNIPSS-LANC-------KSLLGLSVSHNKLTSTLPQQIL--SVTTLSLYLELDNNLLNGSLPPEVGNLK 350 (746)
Q Consensus 281 ~l~~l~n~l~~~~p~~-~~~l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~l~~~L~Ls~N~l~~~~p~~~~~l~ 350 (746)
.|++.+|++. .+|.. +... ++|+.|+|++|+++ .+|..++ .+++| +.|+|++|++++ +|..+++++
T Consensus 461 ~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L-~~L~Ls~N~l~~-ip~~~~~l~ 536 (636)
T 4eco_A 461 SINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYL-VGIDLSYNSFSK-FPTQPLNSS 536 (636)
T ss_dssp EEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTC-CEEECCSSCCSS-CCCGGGGCS
T ss_pred EEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCc-CEEECCCCCCCC-cChhhhcCC
Confidence 7777789998 55554 4333 39999999999999 7999987 89999 689999999997 999999999
Q ss_pred CCceeec---------------CCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCCcC
Q 041467 351 NLLRLHI---------------PEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLC 402 (746)
Q Consensus 351 ~L~~L~l---------------p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~ 402 (746)
+|+.|++ |..+..+++|+.|++++|++ +.+|.. ....+..+++.+|+..|
T Consensus 537 ~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 537 TLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNIS 601 (636)
T ss_dssp SCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCE
T ss_pred CCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCcc
Confidence 9999976 44567789999999999999 778864 34788888888887654
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=366.25 Aligned_cols=175 Identities=26% Similarity=0.346 Sum_probs=140.4
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||+||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 36899999999999999997 9999986432 33456799999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+ +|++. ...+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-- 165 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-- 165 (275)
T ss_dssp EECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC--
Confidence 9999 56664 56799999999999999999999999 9999999999999999999999999999875321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.+||+.|||||++.+..++ +.++||||+||++|
T Consensus 166 -------~~~~~~~GT~~Y~APE~~~~~~y~--~~~~DiwSlGvily 203 (275)
T 3hyh_A 166 -------NFLKTSCGSPNYAAPEVISGKLYA--GPEVDVWSCGVILY 203 (275)
T ss_dssp ----------------CTTSCHHHHSSSSCC--CTHHHHHHHHHHHH
T ss_pred -------CccCCeeECcccCChhhhcCCCCC--CChhhhHHHHHHHH
Confidence 123347899999999999988764 33699999999999
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-41 Score=388.45 Aligned_cols=378 Identities=20% Similarity=0.197 Sum_probs=258.0
Q ss_pred cccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEcc
Q 041467 19 FLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID 98 (746)
Q Consensus 19 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 98 (746)
.+++|||++|.|++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+.+..|..|+++++|++|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 45666666666665556666666666666666666665556666666666666666666665556666666666666666
Q ss_pred CCCCc----CcccCCCCCCEEeccCCCcccc-----cCCCCCcEeeCccCcccccCCccccCCCCCC--EEEccCCCCCC
Q 041467 99 CGGRI----DSLGHLKSLLLLSLAFNQFLSL-----SNASSLEMIEFSRNQFSGGVSVDFSRLKNLS--WLNLGVNNLGS 167 (746)
Q Consensus 99 ~~~~~----~~~~~l~~L~~L~Ls~N~l~~l-----~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~--~L~Ls~N~l~~ 167 (746)
.+... ..++++++|++|+|++|++..+ ..+++|+.|++++|++++..+..|+.+++|+ .|++++|.+++
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCE
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCc
Confidence 54322 3455666666666666666332 2355666666666666665566666666666 56666665554
Q ss_pred CCCCCcc---------------------------------------------------------------------cccc
Q 041467 168 GTANELD---------------------------------------------------------------------FINL 178 (746)
Q Consensus 168 ~~~~~~~---------------------------------------------------------------------~~~~ 178 (746)
..+..+. .+..
T Consensus 194 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~ 273 (606)
T 3t6q_A 194 IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNT 273 (606)
T ss_dssp ECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTT
T ss_pred cChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHH
Confidence 3322210 1223
Q ss_pred ccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCc-CCCCCCC
Q 041467 179 LTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP-LIGETPN 257 (746)
Q Consensus 179 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~ 257 (746)
|..+++|++|++++|+++ .+|..+..++ +|++|++++|++++..|..+.++++|++|++++|.+.+.+|. .+..+++
T Consensus 274 ~~~l~~L~~L~l~~n~l~-~lp~~l~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 351 (606)
T 3t6q_A 274 FHCFSGLQELDLTATHLS-ELPSGLVGLS-TLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLEN 351 (606)
T ss_dssp TTTCTTCSEEECTTSCCS-CCCSSCCSCT-TCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTT
T ss_pred hccccCCCEEeccCCccC-CCChhhcccc-cCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCc
Confidence 667788888888888887 6777777776 688888888888877777888888888888888888766655 4788888
Q ss_pred Cceeecccccccccc--cccc---cccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchh-hhhcccccceE
Q 041467 258 LQLLNIGGNHLQGSI--LSSL---GNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQ-ILSVTTLSLYL 331 (746)
Q Consensus 258 L~~L~Ls~N~l~~~~--~~~l---~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~l~~~L 331 (746)
|++|++++|.+++.. +..+ .+|+.+++.+|.+.+..|..|..+++|+.|++++|++++..|.. +..++.+ +.|
T Consensus 352 L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L 430 (606)
T 3t6q_A 352 LRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLL-KVL 430 (606)
T ss_dssp CCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTC-CEE
T ss_pred CCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccC-CEE
Confidence 888888888887654 4333 44455555577787777888888888888888888887665544 6777777 578
Q ss_pred EccCccccccCchhhhcccCCceeecC------------CCCCCCCCCCEEEccCCcCcccCCC-CCccCCCCeeeEecC
Q 041467 332 ELDNNLLNGSLPPEVGNLKNLLRLHIP------------EYPENLSFFELLNLSYNYFGSEVPT-KGVFNNKTRFSIIGN 398 (746)
Q Consensus 332 ~Ls~N~l~~~~p~~~~~l~~L~~L~lp------------~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~~n 398 (746)
++++|.+++..|..++.+++|+.|++. ..+..+++|+.|++++|++++.+|. ...+..+..+++.+|
T Consensus 431 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 510 (606)
T 3t6q_A 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHN 510 (606)
T ss_dssp ECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred ECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCC
Confidence 888888887778888888888888653 2345677888888888888877664 244566677777766
Q ss_pred C
Q 041467 399 G 399 (746)
Q Consensus 399 ~ 399 (746)
.
T Consensus 511 ~ 511 (606)
T 3t6q_A 511 R 511 (606)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=390.79 Aligned_cols=386 Identities=19% Similarity=0.159 Sum_probs=298.4
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 82 (746)
+|++...++..+..+++|++|+|++|.+++..|.+|+++++|++|+|++|++++..|..|+++++|++|++++|.+.+..
T Consensus 42 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~ 121 (606)
T 3t6q_A 42 FNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSID 121 (606)
T ss_dssp TCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGG
T ss_pred CCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCC
Confidence 45666666667778999999999999999888999999999999999999999888999999999999999999998877
Q ss_pred chhhcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCCccc-----ccCCCCCc---------------------
Q 041467 83 LTEICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLS-----LSNASSLE--------------------- 132 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L~--------------------- 132 (746)
+..+.++++|++|++++|... ..+..+++|+.|++++|++.. +..+++|+
T Consensus 122 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~ 201 (606)
T 3t6q_A 122 FIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS 201 (606)
T ss_dssp GSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT
T ss_pred cchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhh
Confidence 888999999999999886432 445558888888888888732 33444444
Q ss_pred --------------------------------------------------------EeeCccCcccccCCccccCCCCCC
Q 041467 133 --------------------------------------------------------MIEFSRNQFSGGVSVDFSRLKNLS 156 (746)
Q Consensus 133 --------------------------------------------------------~L~Ls~N~l~~~~~~~~~~l~~L~ 156 (746)
.|++++|++++..+..|+.+++|+
T Consensus 202 ~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 281 (606)
T 3t6q_A 202 AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQ 281 (606)
T ss_dssp CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCS
T ss_pred ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCC
Confidence 444444555555555578889999
Q ss_pred EEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCc-cccCCCCCC
Q 041467 157 WLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPH-GIRNLVNLN 235 (746)
Q Consensus 157 ~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~-~~~~l~~L~ 235 (746)
+|++++|.++. +|..+..+++|++|++++|.+++..|..+..++ +|+.|++++|.+.+.+|. .|.++++|+
T Consensus 282 ~L~l~~n~l~~-------lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 353 (606)
T 3t6q_A 282 ELDLTATHLSE-------LPSGLVGLSTLKKLVLSANKFENLCQISASNFP-SLTHLSIKGNTKRLELGTGCLENLENLR 353 (606)
T ss_dssp EEECTTSCCSC-------CCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCT-TCSEEECCSCSSCCBCCSSTTTTCTTCC
T ss_pred EEeccCCccCC-------CChhhcccccCCEEECccCCcCcCchhhhhccC-cCCEEECCCCCcccccchhhhhccCcCC
Confidence 99999999974 556678889999999999999877788888887 689999999888866665 488888888
Q ss_pred eeecccccceecC--CcCCCCCCCCceeecccccccccccccccc---cChHHhhhccCCCCCCcc-ccCCCCCCeeeec
Q 041467 236 WLTMESSQLIGTI--PPLIGETPNLQLLNIGGNHLQGSILSSLGN---LTLQTYLFNNLQGNIPSS-LANCKSLLGLSVS 309 (746)
Q Consensus 236 ~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~---l~~l~~l~n~l~~~~p~~-~~~l~~L~~L~Ls 309 (746)
+|++++|++.+.. |..++.+++|++|++++|.+.+..+..+.. |+.+++.+|.+.+..|.. |..+++|++|+++
T Consensus 354 ~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~ 433 (606)
T 3t6q_A 354 ELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLS 433 (606)
T ss_dssp EEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECT
T ss_pred EEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECC
Confidence 8888888887765 777888888888888888888776666544 444555577777766544 7888888888888
Q ss_pred CCcCccccchhhhhcccccceEEccCcccccc---CchhhhcccCCceeec---------CCCCCCCCCCCEEEccCCcC
Q 041467 310 HNKLTSTLPQQILSVTTLSLYLELDNNLLNGS---LPPEVGNLKNLLRLHI---------PEYPENLSFFELLNLSYNYF 377 (746)
Q Consensus 310 ~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~l---------p~~~~~l~~L~~L~ls~N~l 377 (746)
+|++++..|..+..+++| +.|++++|++++. .+..+..+++|+.|++ |..+..++.|+.|++++|++
T Consensus 434 ~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 512 (606)
T 3t6q_A 434 HSLLDISSEQLFDGLPAL-QHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRL 512 (606)
T ss_dssp TCCCBTTCTTTTTTCTTC-CEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCccCCcCHHHHhCCCCC-CEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCcc
Confidence 888887777777888888 5788888888762 3356778888888754 45667778888888888888
Q ss_pred cccCCCC-CccCCCCeeeEecC
Q 041467 378 GSEVPTK-GVFNNKTRFSIIGN 398 (746)
Q Consensus 378 ~~~~p~~-~~~~~~~~~~~~~n 398 (746)
++.+|.. .....+ .+++.+|
T Consensus 513 ~~~~~~~l~~l~~L-~L~L~~N 533 (606)
T 3t6q_A 513 TSSSIEALSHLKGI-YLNLASN 533 (606)
T ss_dssp CGGGGGGGTTCCSC-EEECCSS
T ss_pred CcCChhHhCccccc-EEECcCC
Confidence 8776632 223444 5555555
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=381.13 Aligned_cols=176 Identities=20% Similarity=0.260 Sum_probs=158.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
...|+..+.||+|+||.||+ ||||++........+.+.+|+++|++++|||||+++++|.+.+..|+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 35699999999999999997 999999766555566799999999999999999999999999999999999
Q ss_pred ccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 550 ISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 550 ~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
|++|+|. ...+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 230 ~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~----- 301 (423)
T 4fie_A 230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV----- 301 (423)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-----
T ss_pred CCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC-----
Confidence 9999986 56799999999999999999999999 99999999999999999999999999998764322
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.+||+.|||||++.+..|+. ++||||+||++|
T Consensus 302 ---~~~~~~~GTp~YmAPEvl~~~~y~~---~~DiWSlGvily 338 (423)
T 4fie_A 302 ---PRRKSLVGTPYWMAPELISRLPYGP---EVDIWSLGIMVI 338 (423)
T ss_dssp ---CCBCCCEECTTTCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred ---ccccccccCcCcCCHHHHCCCCCCc---HHHHHHHHHHHH
Confidence 2234578999999999999887755 499999999999
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=372.68 Aligned_cols=175 Identities=23% Similarity=0.277 Sum_probs=147.6
Q ss_pred cCCCCCCeEeecCCeeEEE------------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN------------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
++|+..+.||+|+||+||+ ||||++.... .....++.+|+++|++++|||||++++++.+.+..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5799999999999999995 8999986542 2234468899999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||||++|+|. ...+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+......
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 99999999996 46799999999999999999999999 99999999999999999999999999998653221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.+||+.|||||++.+..|+.+ +||||+||++|
T Consensus 181 --------~~~~~~~GT~~YmAPE~~~~~~y~~~---~DiwSlGvily 217 (304)
T 3ubd_A 181 --------KKAYSFCGTVEYMAPEVVNRRGHTQS---ADWWSFGVLMF 217 (304)
T ss_dssp --------CCCCSCCCCGGGCCHHHHHTSCCCTH---HHHHHHHHHHH
T ss_pred --------ccccccccCcccCCHHHhccCCCCCC---CcccchHHHHH
Confidence 22335789999999999998877654 99999999999
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=369.34 Aligned_cols=177 Identities=19% Similarity=0.228 Sum_probs=149.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..+.|+..+.||+|+||+||+ ||||+++... ...+|++++++++|||||+++++|.+.+..|+|||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 345688889999999999997 9999986432 13579999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC-cEEEccccccccccCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV-VTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~-~~ki~DfGla~~~~~~~~~ 622 (746)
||++|+|. ...+++.++..|+.||+.||+|||++ +||||||||+|||++.+| ++||+|||+|+.+......
T Consensus 131 y~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 131 LLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred ccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 99999996 45799999999999999999999999 999999999999999887 6999999999987543221
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ........+||+.|||||++.+..|+. ++||||+||++|
T Consensus 208 ~---~~~~~~~~~GT~~YmAPE~~~~~~y~~---~~DiwSlGvily 247 (336)
T 4g3f_A 208 K---SLLTGDYIPGTETHMAPEVVMGKPCDA---KVDIWSSCCMML 247 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred c---ceecCCccccCccccCHHHHCCCCCCc---HHHHHHHHHHHH
Confidence 1 111223468999999999999987765 499999999999
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-42 Score=395.40 Aligned_cols=337 Identities=21% Similarity=0.276 Sum_probs=293.6
Q ss_pred cCcccCchhhhCCccCcEEecccCcCCcc-----------------CCcccc--CCCCCCeeeCcCCCCCCccchhhcCC
Q 041467 29 GFNGEIPHQIGRLISLERLILSNNSFSCA-----------------IPANLS--SGSNLIKLSTDSNNLVRDILTEICSL 89 (746)
Q Consensus 29 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l 89 (746)
++++ +|++|+++++|++|+|++|.|++. +|..++ ++++|++|+|++|.+.+.+|..++++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 3445 899999999999999999999986 999999 99999999999999999999999999
Q ss_pred CCCCEEEccCCC-C-----cCcccCC------CCCCEEeccCCCcc------cccCCCCCcEeeCccCcccccCCccccC
Q 041467 90 FKLERLRIDCGG-R-----IDSLGHL------KSLLLLSLAFNQFL------SLSNASSLEMIEFSRNQFSGGVSVDFSR 151 (746)
Q Consensus 90 ~~L~~L~l~~~~-~-----~~~~~~l------~~L~~L~Ls~N~l~------~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 151 (746)
++|++|+++.|. . +..++++ ++|+.|+|++|++. .+.++++|+.|+|++|+++|.+| .|+.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~ 351 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGS 351 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccchh-hhCC
Confidence 999999999886 2 2345555 99999999999994 46678999999999999998899 9999
Q ss_pred CCCCCEEEccCCCCCCCCCCCccccccccCCCC-CCEEEcccccccccCChhhhhcc-cccceEEcccCcccccCCcccc
Q 041467 152 LKNLSWLNLGVNNLGSGTANELDFINLLTNCSK-LERLYFNRNGFEGVLPHSIANLS-STIKQIAMGSNRISSTIPHGIR 229 (746)
Q Consensus 152 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~-~~L~~L~l~~N~i~~~~p~~~~ 229 (746)
+++|++|+|++|.++. +|..+..+++ |++|++++|.++ .+|..+..+. .+|+.|++++|++++.+|..|.
T Consensus 352 l~~L~~L~L~~N~l~~-------lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 423 (636)
T 4eco_A 352 EIKLASLNLAYNQITE-------IPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFD 423 (636)
T ss_dssp EEEESEEECCSSEEEE-------CCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSC
T ss_pred CCCCCEEECCCCcccc-------ccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhc
Confidence 9999999999999973 5667888999 999999999998 7888776643 2699999999999999999998
Q ss_pred -------CCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccccccccc----------ccChHHhhhccCCCC
Q 041467 230 -------NLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLG----------NLTLQTYLFNNLQGN 292 (746)
Q Consensus 230 -------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~----------~l~~l~~l~n~l~~~ 292 (746)
.+.+|++|+|++|++.+..+..+..+++|++|+|++|+++...+..+. +|+.|++.+|+++ .
T Consensus 424 ~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 502 (636)
T 4eco_A 424 PLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-K 502 (636)
T ss_dssp TTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-B
T ss_pred ccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-c
Confidence 888999999999999954444566799999999999999944333333 6777778899999 7
Q ss_pred CCcccc--CCCCCCeeeecCCcCccccchhhhhcccccceEEc------cCccccccCchhhhcccCCceeec-------
Q 041467 293 IPSSLA--NCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLEL------DNNLLNGSLPPEVGNLKNLLRLHI------- 357 (746)
Q Consensus 293 ~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~L------s~N~l~~~~p~~~~~l~~L~~L~l------- 357 (746)
+|..+. .+++|+.|+|++|+|++ +|..++.+++| +.|+| ++|++.+.+|.+++++++|+.|++
T Consensus 503 lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L-~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 580 (636)
T 4eco_A 503 LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTL-KGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK 580 (636)
T ss_dssp CCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSC-CEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCB
T ss_pred cChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCC-CEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCCc
Confidence 888887 99999999999999997 99999999999 68999 568899999999999999999965
Q ss_pred -CCCCCCCCCCCEEEccCCcCccc
Q 041467 358 -PEYPENLSFFELLNLSYNYFGSE 380 (746)
Q Consensus 358 -p~~~~~l~~L~~L~ls~N~l~~~ 380 (746)
|..+. +.|+.||+++|++...
T Consensus 581 ip~~~~--~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 581 VNEKIT--PNISVLDIKDNPNISI 602 (636)
T ss_dssp CCSCCC--TTCCEEECCSCTTCEE
T ss_pred cCHhHh--CcCCEEECcCCCCccc
Confidence 44433 7899999999988753
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=358.14 Aligned_cols=171 Identities=22% Similarity=0.353 Sum_probs=144.6
Q ss_pred CCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEec----CCcccchh
Q 041467 483 SPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSS----IDFEGFDF 547 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----~~~~~lv~ 547 (746)
...+.||+|+||+||+ ||||++.... ....+.|.+|+++|++++|||||+++++|.+ ....|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4567899999999997 9999986442 3345679999999999999999999999875 34579999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-CCCcEEEccccccccccCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||++|+|. ...+++..+..++.||+.||+|||++ .++||||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~--- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA--- 184 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT---
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC---
Confidence 999999996 46799999999999999999999998 11399999999999998 479999999999986321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.+||+.|||||++.+ +| +.++|||||||++|
T Consensus 185 -------~~~~~~~GTp~YmAPE~~~~-~y---~~~~DiwSlGvily 220 (290)
T 3fpq_A 185 -------SFAKAVIGTPEFMAPEMYEE-KY---DESVDVYAFGMCML 220 (290)
T ss_dssp -------TSBEESCSSCCCCCGGGGGT-CC---CTHHHHHHHHHHHH
T ss_pred -------CccCCcccCccccCHHHcCC-CC---CcHHHHHHHHHHHH
Confidence 12335789999999999865 35 44699999999999
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-41 Score=402.28 Aligned_cols=394 Identities=18% Similarity=0.191 Sum_probs=222.0
Q ss_pred CcccccCccccccccccEEecccCcCcccC-chhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 5 NLLQYSKPLCILRTFLRYINLVNNGFNGEI-PHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 5 ~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
.+...++..+..+++|++|||++|.+.+.+ |.+|+++++|++|+|++|.|++..|..|+++++|++|+|++|.+.+.+|
T Consensus 35 ~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~ 114 (844)
T 3j0a_A 35 YIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVL 114 (844)
T ss_dssp CCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCS
T ss_pred cCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccc
Confidence 333333444444555555555555333333 4555555555555555555555555555555555555555555554444
Q ss_pred hh--hcCCCCCCEEEccCCCCc-----CcccCCCCCCEEeccCCCccc-----ccCC--CCCcEeeCccCcccccCCccc
Q 041467 84 TE--ICSLFKLERLRIDCGGRI-----DSLGHLKSLLLLSLAFNQFLS-----LSNA--SSLEMIEFSRNQFSGGVSVDF 149 (746)
Q Consensus 84 ~~--~~~l~~L~~L~l~~~~~~-----~~~~~l~~L~~L~Ls~N~l~~-----l~~l--~~L~~L~Ls~N~l~~~~~~~~ 149 (746)
.. +.++++|++|+|+.|... ..|+++++|+.|+|++|.+.. +..+ ++|+.|+|++|.+.+..|..+
T Consensus 115 ~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~ 194 (844)
T 3j0a_A 115 KDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDW 194 (844)
T ss_dssp TTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCC
T ss_pred cCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccch
Confidence 33 555555555555553321 235555555555555555521 1111 333333333333333333333
Q ss_pred cCCCC------CCEEEccCCCCCCCCCCCc--------------------------------------------------
Q 041467 150 SRLKN------LSWLNLGVNNLGSGTANEL-------------------------------------------------- 173 (746)
Q Consensus 150 ~~l~~------L~~L~Ls~N~l~~~~~~~~-------------------------------------------------- 173 (746)
+.+++ |+.|+|++|.+++..+..+
T Consensus 195 ~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls 274 (844)
T 3j0a_A 195 GKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLS 274 (844)
T ss_dssp CSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECT
T ss_pred hhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECC
Confidence 32222 4555555554322111000
Q ss_pred ------cccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceec
Q 041467 174 ------DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGT 247 (746)
Q Consensus 174 ------~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~ 247 (746)
..+..|..+++|+.|+|++|++++..|..|..+. +|+.|++++|++++..|..|.++++|++|++++|++.+.
T Consensus 275 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 353 (844)
T 3j0a_A 275 HGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLD-NLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAII 353 (844)
T ss_dssp TCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCS-SCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCC
T ss_pred CCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCC-CCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCcc
Confidence 1233456667777777777777766666676666 577777777777766677777777777777777777666
Q ss_pred CCcCCCCCCCCceeeccccccccccc------------------c-------------------------cccccChHHh
Q 041467 248 IPPLIGETPNLQLLNIGGNHLQGSIL------------------S-------------------------SLGNLTLQTY 284 (746)
Q Consensus 248 ~p~~~~~l~~L~~L~Ls~N~l~~~~~------------------~-------------------------~l~~l~~l~~ 284 (746)
.+..|..+++|+.|+|++|.+++... . .+.+|+.|++
T Consensus 354 ~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~L 433 (844)
T 3j0a_A 354 QDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILIL 433 (844)
T ss_dssp CSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEE
T ss_pred ChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeC
Confidence 66667777777777777777664211 0 1112222222
Q ss_pred hhccCCCCCCc-cccCCCCCCeeeecCCcCc-----cccchhhhhcccccceEEccCccccccCchhhhcccCCceeecC
Q 041467 285 LFNNLQGNIPS-SLANCKSLLGLSVSHNKLT-----STLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIP 358 (746)
Q Consensus 285 l~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp 358 (746)
.+|++++..+. .+..+++|+.|+|++|.++ +..|..+..+++| +.|+|++|++++..|..|..+++|+.|++.
T Consensus 434 s~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 512 (844)
T 3j0a_A 434 NQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHL-QVLYLNHNYLNSLPPGVFSHLTALRGLSLN 512 (844)
T ss_dssp ESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCE-ECCCCCHHHHTTCCTTSSSSCCSCSEEEEE
T ss_pred CCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccc-cEEECCCCcccccChhHccchhhhheeECC
Confidence 23333332222 2333455555555555554 2233445667777 578888888887777778888888888652
Q ss_pred C--------CCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCCcCC
Q 041467 359 E--------YPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCG 403 (746)
Q Consensus 359 ~--------~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~ 403 (746)
. .... ++|+.||+++|++++.+|.. +.++..+++.+|++.|.
T Consensus 513 ~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 513 SNRLTVLSHNDLP-ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICE 562 (844)
T ss_dssp SCCCSSCCCCCCC-SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCS
T ss_pred CCCCCccChhhhh-ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccc
Confidence 2 1111 67888888888888887753 56788999999999884
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-43 Score=365.10 Aligned_cols=236 Identities=18% Similarity=0.184 Sum_probs=174.0
Q ss_pred cCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC----cccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID----FEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~----~~~lv~e 548 (746)
.+|...+.||+|+||+||+ ||||++...... ...+++|+..+.+++|||||+++|+|.+.+ ..++|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 4577889999999999997 999998654322 223456777888999999999999998754 4689999
Q ss_pred hccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 549 AISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHH-----CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 549 ~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~-----~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||++|+|. ...++|.++.+++.|+|+||+|||++ +.++||||||||+|||+|.++++||+|||+|+.....
T Consensus 82 y~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 161 (303)
T 3hmm_A 82 YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 161 (303)
T ss_dssp CCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred CCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCC
Confidence 99999996 56799999999999999999999986 3568999999999999999999999999999876433
Q ss_pred CCCCCccccccccccccccccccccccccccc---ccCCCccceeeccceeecccccc-----------c----------
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNL---ENREKRHTVMSFPQRFALNEKKQ-----------N---------- 675 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~---~~~~~~~DiwSlG~i~~~~~~~~-----------~---------- 675 (746)
... ........+||++|||||++.+... ..++.++|||||||++|...... .
T Consensus 162 ~~~----~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 162 TDT----IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp TTE----ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred CCc----eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 221 1122334689999999999986521 12345699999999999321110 0
Q ss_pred -cch----hhc--cc-cC----CCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 676 -KSI----LKS--AG-IK----GKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 676 -~~i----~~~--~~-~~----~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
..+ ... .+ .| ..+..+.+..++..||...|+ ||++.++...++++
T Consensus 238 ~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l 295 (303)
T 3hmm_A 238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 000 000 01 11 112345677888889988898 99998877665544
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=382.98 Aligned_cols=392 Identities=18% Similarity=0.142 Sum_probs=232.7
Q ss_pred cccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchh
Q 041467 6 LLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTE 85 (746)
Q Consensus 6 ~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 85 (746)
+...++..+..+++|++|+|++|.+++..|.+|+++++|++|+|++|++++..|..|+++++|++|+|++|.+.+..+..
T Consensus 44 l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~ 123 (606)
T 3vq2_A 44 LKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFP 123 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSC
T ss_pred cCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccc
Confidence 33333334445555555555555555555555555555555555555555555555555555555555555555544455
Q ss_pred hcCCCCCCEEEccCCCC-----cCcccCCCCCCEEeccCCCcccc-----cCCCC----CcEeeCccCcccccCCccccC
Q 041467 86 ICSLFKLERLRIDCGGR-----IDSLGHLKSLLLLSLAFNQFLSL-----SNASS----LEMIEFSRNQFSGGVSVDFSR 151 (746)
Q Consensus 86 ~~~l~~L~~L~l~~~~~-----~~~~~~l~~L~~L~Ls~N~l~~l-----~~l~~----L~~L~Ls~N~l~~~~~~~~~~ 151 (746)
++++++|++|+++.|.. +..++++++|+.|+|++|++..+ ..+++ +..|++++|.+++..+..|..
T Consensus 124 ~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~ 203 (606)
T 3vq2_A 124 IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG 203 (606)
T ss_dssp CTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTT
T ss_pred cCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccC
Confidence 55555555555555332 23455555555555555555321 11111 223444444444333333322
Q ss_pred CCCCCEEEccCCCCCCC--------------------------------------------------CCC----------
Q 041467 152 LKNLSWLNLGVNNLGSG--------------------------------------------------TAN---------- 171 (746)
Q Consensus 152 l~~L~~L~Ls~N~l~~~--------------------------------------------------~~~---------- 171 (746)
. +|+.|++++|.+.+. ...
T Consensus 204 ~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~ 282 (606)
T 3vq2_A 204 I-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFH 282 (606)
T ss_dssp C-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCG
T ss_pred c-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccc
Confidence 2 344444444433200 000
Q ss_pred --------------CccccccccCCCCCCEEEcccccccccCCh--------------------hhhhcccccceEEccc
Q 041467 172 --------------ELDFINLLTNCSKLERLYFNRNGFEGVLPH--------------------SIANLSSTIKQIAMGS 217 (746)
Q Consensus 172 --------------~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~--------------------~~~~l~~~L~~L~l~~ 217 (746)
...++ .+..+++|+.|++++|.+ +.+|. .+..++ +|+.|++++
T Consensus 283 ~l~~L~~L~l~~~~~~~l~-~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~-~L~~L~ls~ 359 (606)
T 3vq2_A 283 CLANVSAMSLAGVSIKYLE-DVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALP-SLSYLDLSR 359 (606)
T ss_dssp GGTTCSEEEEESCCCCCCC-CCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCT-TCCEEECCS
T ss_pred cCCCCCEEEecCccchhhh-hccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCC-CCCEEECcC
Confidence 00011 244555666677766666 35552 223333 566666667
Q ss_pred Cccccc--CCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccccc-ccc---cccChHHhhhccCCC
Q 041467 218 NRISST--IPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSIL-SSL---GNLTLQTYLFNNLQG 291 (746)
Q Consensus 218 N~i~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~l---~~l~~l~~l~n~l~~ 291 (746)
|++++. +|..+..+++|++|++++|.+.+ +|..+..+++|+.|++++|++.+..+ ..+ .+|+.+++.+|.+.+
T Consensus 360 n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 438 (606)
T 3vq2_A 360 NALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKI 438 (606)
T ss_dssp SCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEE
T ss_pred CccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCc
Confidence 776654 36677777777777777777764 55777778888888888888777655 333 444555555777877
Q ss_pred CCCccccCCCCCCeeeecCCcCcc-ccchhhhhcccccceEEccCccccccCchhhhcccCCceeec---------CCCC
Q 041467 292 NIPSSLANCKSLLGLSVSHNKLTS-TLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI---------PEYP 361 (746)
Q Consensus 292 ~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l---------p~~~ 361 (746)
..|..|+.+++|++|++++|++++ .+|..+..+++| +.|++++|++++..|..++++++|+.|++ |..+
T Consensus 439 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 517 (606)
T 3vq2_A 439 DFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNL-TFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHY 517 (606)
T ss_dssp CCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC-CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGT
T ss_pred cchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCC-CEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHc
Confidence 778888888888888888888876 367777778887 57888888888777778888888888754 4456
Q ss_pred CCCCCCCEEEccCCcCcccCCCCCccC-CCCeeeEecCCCcCC
Q 041467 362 ENLSFFELLNLSYNYFGSEVPTKGVFN-NKTRFSIIGNGKLCG 403 (746)
Q Consensus 362 ~~l~~L~~L~ls~N~l~~~~p~~~~~~-~~~~~~~~~n~~l~~ 403 (746)
..+++|+.||+++|+++..++....+. ++..+++.+|+..|.
T Consensus 518 ~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 518 NQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp TTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred cCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccC
Confidence 677788888888888875333322333 467777888877664
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-43 Score=362.22 Aligned_cols=184 Identities=24% Similarity=0.392 Sum_probs=141.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-------
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID------- 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------- 541 (746)
.++|+..+.||+|+||+||+ ||||++.... ....+.+.+|+++|++++|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 35689999999999999997 9999986543 334567999999999999999999999987644
Q ss_pred -----cccchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEc
Q 041467 542 -----FEGFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608 (746)
Q Consensus 542 -----~~~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 608 (746)
..|+|||||++|+|. ....++..++.++.||+.||+|||++ +||||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 368999999999986 12345667899999999999999999 99999999999999999999999
Q ss_pred cccccccccCCCCCCC----cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 609 DLGLAKFLYGYEPGTT----AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 609 DfGla~~~~~~~~~~~----~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|||+|+.+........ .......++.+||+.|||||++.+..|+. ++||||+||++|
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~---~~DiwSlGvily 221 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSH---KVDIFSLGLILF 221 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCC---HHHHHHHHHHHH
Confidence 9999998754332111 01112234578999999999999887755 599999999999
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=379.84 Aligned_cols=386 Identities=19% Similarity=0.163 Sum_probs=221.1
Q ss_pred cccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchh
Q 041467 6 LLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTE 85 (746)
Q Consensus 6 ~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 85 (746)
+...++..+..+++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|+++++|++|+|++|.+.+..|..
T Consensus 37 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 116 (680)
T 1ziw_A 37 LRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNP 116 (680)
T ss_dssp CCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCT
T ss_pred CCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhH
Confidence 33333334444555666666666665555556666666666666666665433334566666666666666655544455
Q ss_pred hcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCCcccc-------cCCCCCcEeeCccCcccccCCccccCC--
Q 041467 86 ICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLSL-------SNASSLEMIEFSRNQFSGGVSVDFSRL-- 152 (746)
Q Consensus 86 ~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~l-------~~l~~L~~L~Ls~N~l~~~~~~~~~~l-- 152 (746)
|+++++|++|+++.+... ..++++++|+.|++++|++..+ ..+++|+.|++++|++++..|..|..+
T Consensus 117 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~ 196 (680)
T 1ziw_A 117 FVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGR 196 (680)
T ss_dssp TTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSE
T ss_pred ccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhh
Confidence 666666666666554321 3345555666666666655322 133455555555555555544444332
Q ss_pred -------------------------CCCCEEEccCCCCCCCCCCCccccccccCCC--CCCEEEcccccccccCChhhhh
Q 041467 153 -------------------------KNLSWLNLGVNNLGSGTANELDFINLLTNCS--KLERLYFNRNGFEGVLPHSIAN 205 (746)
Q Consensus 153 -------------------------~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~ 205 (746)
++|+.|++++|.+++. .+..|.+++ +|+.|++++|++++..|..|..
T Consensus 197 L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~------~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~ 270 (680)
T 1ziw_A 197 LFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTT------SNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAW 270 (680)
T ss_dssp ECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEE------CTTTTGGGGGSCCCEEECTTSCCCEECTTTTTT
T ss_pred hhhhhccccccChhhHHHHHHHhhhccccEEEccCCccccc------ChhHhhccCcCCCCEEECCCCCcCccCcccccC
Confidence 2233333333333321 122233332 2555555555555555555555
Q ss_pred cccccceEEcccCcccccCCcccc---------------------------------CCCCCCeeecccccceecCCcCC
Q 041467 206 LSSTIKQIAMGSNRISSTIPHGIR---------------------------------NLVNLNWLTMESSQLIGTIPPLI 252 (746)
Q Consensus 206 l~~~L~~L~l~~N~i~~~~p~~~~---------------------------------~l~~L~~L~L~~N~l~~~~p~~~ 252 (746)
++ +|+.|++++|++++..|..|. .+++|++|++++|++.+..|..|
T Consensus 271 l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 349 (680)
T 1ziw_A 271 LP-QLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMF 349 (680)
T ss_dssp CT-TCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTT
T ss_pred cc-cccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHh
Confidence 54 455555555555554444443 34444444444444444444445
Q ss_pred CCCCCCceeeccccccccccc--ccc-----cccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccc-hhhhhc
Q 041467 253 GETPNLQLLNIGGNHLQGSIL--SSL-----GNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLP-QQILSV 324 (746)
Q Consensus 253 ~~l~~L~~L~Ls~N~l~~~~~--~~l-----~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l 324 (746)
.++++|++|++++|.+..... ..+ ..++.+++.+|++.+..|..|..+++|+.|+|++|++++.+| ..+..+
T Consensus 350 ~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l 429 (680)
T 1ziw_A 350 TGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGL 429 (680)
T ss_dssp TTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTC
T ss_pred ccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCc
Confidence 555555555555554332110 111 234445555677777778888888888888888888887666 567777
Q ss_pred ccccceEEccCccccccCchhhhcccCCceeec-----------CCCCCCCCCCCEEEccCCcCcccCCC-CCccCCCCe
Q 041467 325 TTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI-----------PEYPENLSFFELLNLSYNYFGSEVPT-KGVFNNKTR 392 (746)
Q Consensus 325 ~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l-----------p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~ 392 (746)
..+ ++|++++|++++..+..|..+++|+.|++ |..+..+++|+.|++++|++++..|. ...+..+..
T Consensus 430 ~~L-~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~ 508 (680)
T 1ziw_A 430 ENI-FEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEI 508 (680)
T ss_dssp TTC-CEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccc-cEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCE
Confidence 777 57888888888877888888888888754 45566788888888888888876554 234566677
Q ss_pred eeEecCC
Q 041467 393 FSIIGNG 399 (746)
Q Consensus 393 ~~~~~n~ 399 (746)
+++.+|.
T Consensus 509 L~Ls~N~ 515 (680)
T 1ziw_A 509 LDLQHNN 515 (680)
T ss_dssp EECCSSC
T ss_pred EeCCCCC
Confidence 7776663
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-43 Score=371.15 Aligned_cols=238 Identities=20% Similarity=0.200 Sum_probs=185.3
Q ss_pred cHHHHhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCC-CceeeEE
Q 041467 471 SHAELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRH-RNLIKII 534 (746)
Q Consensus 471 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~H-pnIv~l~ 534 (746)
+..++....++|+..+.||+|+||+||+ ||||++.... ....+.|.+|+++|++++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 4455666678899999999999999996 8999886543 3345679999999999975 9999999
Q ss_pred EEEecC-CcccchhhhccCCccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC
Q 041467 535 TICSSI-DFEGFDFKAISNGQLR---------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDL 592 (746)
Q Consensus 535 ~~~~~~-~~~~lv~e~~~~g~l~---------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDl 592 (746)
|+|... +..++|||||++|+|. ...+++.++..++.|||+||+|||++ +||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 999765 5689999999999985 12379999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc-
Q 041467 593 KPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE- 671 (746)
Q Consensus 593 kp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~- 671 (746)
||+|||+++++.+||+|||+|+.+..... .......+||+.|||||++.+..|+.+ +|||||||++|...
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~------~~~~~~~~gt~~ymAPE~l~~~~y~~k---sDVwS~Gv~l~El~t 282 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQ---SDVWSFGVLLWEIFS 282 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTT------SEEETTEEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHTT
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCC------ceeeccccccccccCHHHHhcCCCCCc---ccEeehHHHHHHHHh
Confidence 99999999999999999999997643322 122334789999999999998887655 99999999998221
Q ss_pred -ccc-------cc---chhhc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 672 -KKQ-------NK---SILKS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 672 -~~~-------~~---~i~~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
... .. .++.. .+..++.+.+.+..++..||...|+ ||++.++...++.+
T Consensus 283 ~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 283 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp TSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 111 01 11111 1222244556677777778888888 99988877655544
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=390.10 Aligned_cols=373 Identities=16% Similarity=0.178 Sum_probs=313.4
Q ss_pred cCccccccccccEEecccCcCcccCchhhhCCccCcEEec-ccCcCCcc-------------------------------
Q 041467 10 SKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLIL-SNNSFSCA------------------------------- 57 (746)
Q Consensus 10 ~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~------------------------------- 57 (746)
+.-.|..-.+++.|+|++|.+.|.+|++|++|++|++||| ++|.++|.
T Consensus 315 ~GV~C~~~~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~ 394 (876)
T 4ecn_A 315 PGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDY 394 (876)
T ss_dssp TTEEECTTSCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCC
T ss_pred CceEecCCCCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhcc
Confidence 3334443467999999999999999999999999999999 77765444
Q ss_pred ---------------------------------------------CCccccCCCCCCeeeCcCCCCCC------------
Q 041467 58 ---------------------------------------------IPANLSSGSNLIKLSTDSNNLVR------------ 80 (746)
Q Consensus 58 ---------------------------------------------~p~~~~~l~~L~~L~L~~N~l~~------------ 80 (746)
+|..|+++++|+.|+|++|.+.+
T Consensus 395 ~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~ 474 (876)
T 4ecn_A 395 DQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANS 474 (876)
T ss_dssp CGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTS
T ss_pred CcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCccccccccccc
Confidence 88899999999999999999988
Q ss_pred -----ccchhhc--CCCCCCEEEccCCC----CcCcccCCCCCCEEeccCCC-ccc------c-------cCCCCCcEee
Q 041467 81 -----DILTEIC--SLFKLERLRIDCGG----RIDSLGHLKSLLLLSLAFNQ-FLS------L-------SNASSLEMIE 135 (746)
Q Consensus 81 -----~~~~~~~--~l~~L~~L~l~~~~----~~~~~~~l~~L~~L~Ls~N~-l~~------l-------~~l~~L~~L~ 135 (746)
.+|..++ ++++|+.|+|+.|. .+..++++++|+.|+|++|+ +.. + ..+++|+.|+
T Consensus 475 n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~ 554 (876)
T 4ecn_A 475 DYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554 (876)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEE
T ss_pred ccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEE
Confidence 3899988 99999999998864 34678999999999999998 642 2 3456999999
Q ss_pred CccCcccccCCc--cccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccc-cce
Q 041467 136 FSRNQFSGGVSV--DFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSST-IKQ 212 (746)
Q Consensus 136 Ls~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~-L~~ 212 (746)
|++|+++ .+|. .|+.+++|+.|+|++|.++. +| .|..+++|+.|+|++|+++ .+|..+..++ + |+.
T Consensus 555 Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~-------lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~-~~L~~ 623 (876)
T 4ecn_A 555 MGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRH-------LE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFT-DQVEG 623 (876)
T ss_dssp CCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCB-------CC-CCCTTSEESEEECCSSCCS-CCCTTSCEEC-TTCCE
T ss_pred eeCCcCC-ccCChhhhhcCCCCCEEECCCCCccc-------ch-hhcCCCcceEEECcCCccc-cchHHHhhcc-ccCCE
Confidence 9999999 7777 89999999999999999974 44 6889999999999999998 8999999987 6 999
Q ss_pred EEcccCcccccCCccccCCCC--CCeeecccccceecCCcCC---C--CCCCCceeecccccccccccc---cccccChH
Q 041467 213 IAMGSNRISSTIPHGIRNLVN--LNWLTMESSQLIGTIPPLI---G--ETPNLQLLNIGGNHLQGSILS---SLGNLTLQ 282 (746)
Q Consensus 213 L~l~~N~i~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~~~---~l~~l~~l 282 (746)
|++++|+++ .+|..+..+.. |+.|+|++|++.+.+|... . .+++|+.|+|++|+++..... .+.+|+.|
T Consensus 624 L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L 702 (876)
T 4ecn_A 624 LGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTI 702 (876)
T ss_dssp EECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEE
T ss_pred EECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEE
Confidence 999999999 78998888765 9999999999998776433 2 345899999999999944333 23567777
Q ss_pred HhhhccCCCCCCccccC--------CCCCCeeeecCCcCccccchhhh--hcccccceEEccCccccccCchhhhcccCC
Q 041467 283 TYLFNNLQGNIPSSLAN--------CKSLLGLSVSHNKLTSTLPQQIL--SVTTLSLYLELDNNLLNGSLPPEVGNLKNL 352 (746)
Q Consensus 283 ~~l~n~l~~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~--~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L 352 (746)
++.+|++. .+|..+.. |++|+.|+|++|+|+ .+|..++ .+++| +.|+|++|++++ +|..++++++|
T Consensus 703 ~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L-~~L~Ls~N~L~~-lp~~l~~L~~L 778 (876)
T 4ecn_A 703 ILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYL-SNMDVSYNCFSS-FPTQPLNSSQL 778 (876)
T ss_dssp ECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTC-CEEECCSSCCSS-CCCGGGGCTTC
T ss_pred ECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCc-CEEEeCCCCCCc-cchhhhcCCCC
Confidence 77789998 56665443 338999999999999 7999987 89999 689999999997 89999999999
Q ss_pred ceeec---------------CCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCC
Q 041467 353 LRLHI---------------PEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGK 400 (746)
Q Consensus 353 ~~L~l---------------p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~ 400 (746)
+.|++ |..+..+++|+.|+|++|++ +.+|.. ...++..+++.+|+.
T Consensus 779 ~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs~N~l 839 (876)
T 4ecn_A 779 KAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIADNPN 839 (876)
T ss_dssp CEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECCSCTT
T ss_pred CEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECCCCCC
Confidence 99966 44567789999999999999 778864 346777888887753
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=380.04 Aligned_cols=394 Identities=20% Similarity=0.193 Sum_probs=231.8
Q ss_pred CCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 4 n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
|.+...++..+..+++|++|+|++|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+.+..|
T Consensus 59 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 138 (680)
T 1ziw_A 59 NTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKL 138 (680)
T ss_dssp SCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCC
T ss_pred CccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCc
Confidence 44444444445556777777777777764444467777777777777777776556667777777777777777766666
Q ss_pred hhhcCCCCCCEEEccCCCCc----Ccc--cCCCCCCEEeccCCCcc----------------------------------
Q 041467 84 TEICSLFKLERLRIDCGGRI----DSL--GHLKSLLLLSLAFNQFL---------------------------------- 123 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~~~----~~~--~~l~~L~~L~Ls~N~l~---------------------------------- 123 (746)
..+.++++|++|+++.+... ..+ ..+++|+.|++++|++.
T Consensus 139 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~ 218 (680)
T 1ziw_A 139 GTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLE 218 (680)
T ss_dssp CSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHH
T ss_pred hhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHH
Confidence 66777777777777654321 111 12344444444444331
Q ss_pred -----------------c-----ccCC--CCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCc------
Q 041467 124 -----------------S-----LSNA--SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANEL------ 173 (746)
Q Consensus 124 -----------------~-----l~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~------ 173 (746)
. +.++ ++|+.|+|++|++++..|..|+.+++|++|+|++|.+++..+..+
T Consensus 219 l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 298 (680)
T 1ziw_A 219 LANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNV 298 (680)
T ss_dssp HTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTC
T ss_pred hhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCc
Confidence 1 1222 237777777777777666777777777777777776655332211
Q ss_pred -----------------cccc----cccCCCCCCEEEcccccccccCChhhhhcc-------------------------
Q 041467 174 -----------------DFIN----LLTNCSKLERLYFNRNGFEGVLPHSIANLS------------------------- 207 (746)
Q Consensus 174 -----------------~~~~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~------------------------- 207 (746)
.+|. .|..+++|++|++++|.+++..|..|..++
T Consensus 299 ~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~ 378 (680)
T 1ziw_A 299 RYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSL 378 (680)
T ss_dssp CEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGG
T ss_pred cEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhccc
Confidence 1111 455667777777777777766666555543
Q ss_pred --cccceEEcccCcccccCCccccCCCCCCeeecccccceecCC-cCCCCCCCCceeecccccccccccccccc---cCh
Q 041467 208 --STIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIP-PLIGETPNLQLLNIGGNHLQGSILSSLGN---LTL 281 (746)
Q Consensus 208 --~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~---l~~ 281 (746)
..|+.|++++|++++..|.+|..+++|++|+|++|.+.+.+| ..|.++++|++|++++|++.+..+..+.. |+.
T Consensus 379 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~ 458 (680)
T 1ziw_A 379 AHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQR 458 (680)
T ss_dssp TTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCE
T ss_pred ccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCccccc
Confidence 123444445555666666677777777777777777766555 46677777777777777766544443332 233
Q ss_pred HHhhhccCC--CCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCc--------hhhhcccC
Q 041467 282 QTYLFNNLQ--GNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLP--------PEVGNLKN 351 (746)
Q Consensus 282 l~~l~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p--------~~~~~l~~ 351 (746)
+.+.+|.+. +.+|..|..+++|+.|+|++|++++..|..+..+..| ++|++++|++++..+ ..+.++++
T Consensus 459 L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~ 537 (680)
T 1ziw_A 459 LMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKL-EILDLQHNNLARLWKHANPGGPIYFLKGLSH 537 (680)
T ss_dssp EECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCGGGGSTTSTTSCCCTTTTCTT
T ss_pred chhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccccc-CEEeCCCCCccccchhhccCCcchhhcCCCC
Confidence 333344443 4556666666667777777777665444556666666 456666666654211 12555666
Q ss_pred Cceeec--------CC-CCCCCCCCCEEEccCCcCcccCCCC-CccCCCCeeeEecC
Q 041467 352 LLRLHI--------PE-YPENLSFFELLNLSYNYFGSEVPTK-GVFNNKTRFSIIGN 398 (746)
Q Consensus 352 L~~L~l--------p~-~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n 398 (746)
|+.|++ |. .+..++.|+.||+++|++++.++.. ..+..+..+++.+|
T Consensus 538 L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N 594 (680)
T 1ziw_A 538 LHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 594 (680)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCC
Confidence 666643 21 3455666666666666666533321 22344455555444
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-40 Score=387.60 Aligned_cols=333 Identities=19% Similarity=0.235 Sum_probs=283.3
Q ss_pred CchhhhCCccCcEEecccCcCCc-----------------cCCcccc--CCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 34 IPHQIGRLISLERLILSNNSFSC-----------------AIPANLS--SGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 34 ~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
+|..|+++++|++|+|++|+|++ .+|..++ ++++|+.|+|++|++.+.+|..|+++++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 88999999999999999999998 3899988 9999999999999999999999999999999
Q ss_pred EEccCCC-C-----cCccc-------CCCCCCEEeccCCCcc------cccCCCCCcEeeCccCcccccCCccccCCCCC
Q 041467 95 LRIDCGG-R-----IDSLG-------HLKSLLLLSLAFNQFL------SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNL 155 (746)
Q Consensus 95 L~l~~~~-~-----~~~~~-------~l~~L~~L~Ls~N~l~------~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 155 (746)
|+++.|. . +..++ .+++|+.|+|++|++. .+.++++|+.|+|++|+++ .+| .|+.+++|
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L 597 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKL 597 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcc
Confidence 9999886 2 22344 4559999999999994 4667899999999999999 677 89999999
Q ss_pred CEEEccCCCCCCCCCCCccccccccCCCC-CCEEEcccccccccCChhhhhcc-cccceEEcccCcccccCCccc---c-
Q 041467 156 SWLNLGVNNLGSGTANELDFINLLTNCSK-LERLYFNRNGFEGVLPHSIANLS-STIKQIAMGSNRISSTIPHGI---R- 229 (746)
Q Consensus 156 ~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~-~~L~~L~l~~N~i~~~~p~~~---~- 229 (746)
+.|+|++|.++. +|..+..+++ |+.|+|++|.++ .+|..+..+. .+|+.|++++|++++.+|... .
T Consensus 598 ~~L~Ls~N~l~~-------lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~ 669 (876)
T 4ecn_A 598 TDLKLDYNQIEE-------IPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDD 669 (876)
T ss_dssp SEEECCSSCCSC-------CCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTT
T ss_pred eEEECcCCcccc-------chHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhcc
Confidence 999999999974 5566888898 999999999998 7888777664 139999999999998776432 2
Q ss_pred -CCCCCCeeecccccceecCCcCC-CCCCCCceeeccccccccccccccc----------ccChHHhhhccCCCCCCccc
Q 041467 230 -NLVNLNWLTMESSQLIGTIPPLI-GETPNLQLLNIGGNHLQGSILSSLG----------NLTLQTYLFNNLQGNIPSSL 297 (746)
Q Consensus 230 -~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~l~----------~l~~l~~l~n~l~~~~p~~~ 297 (746)
.+.+|+.|+|++|++. .+|..+ ..+++|+.|+|++|+++......+. +|+.|++.+|++. .+|..+
T Consensus 670 ~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l 747 (876)
T 4ecn_A 670 YKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDF 747 (876)
T ss_dssp CCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGG
T ss_pred ccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHh
Confidence 3458999999999998 566554 5899999999999999943333222 6777777789998 788888
Q ss_pred c--CCCCCCeeeecCCcCccccchhhhhcccccceEEccC------ccccccCchhhhcccCCceeec--------CCCC
Q 041467 298 A--NCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDN------NLLNGSLPPEVGNLKNLLRLHI--------PEYP 361 (746)
Q Consensus 298 ~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~l--------p~~~ 361 (746)
. .+++|+.|+|++|+|++ +|..++.+++| +.|+|++ |++.+.+|..++++++|+.|++ |..+
T Consensus 748 ~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L-~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L~~Ip~~l 825 (876)
T 4ecn_A 748 RATTLPYLSNMDVSYNCFSS-FPTQPLNSSQL-KAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIRKVDEKL 825 (876)
T ss_dssp STTTCTTCCEEECCSSCCSS-CCCGGGGCTTC-CEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCBCCSCC
T ss_pred hhccCCCcCEEEeCCCCCCc-cchhhhcCCCC-CEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCCCccCHhh
Confidence 7 99999999999999996 89999999999 6899976 8899999999999999999965 4443
Q ss_pred CCCCCCCEEEccCCcCcccCC
Q 041467 362 ENLSFFELLNLSYNYFGSEVP 382 (746)
Q Consensus 362 ~~l~~L~~L~ls~N~l~~~~p 382 (746)
. ++|+.|||++|++...-+
T Consensus 826 ~--~~L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 826 T--PQLYILDIADNPNISIDV 844 (876)
T ss_dssp C--SSSCEEECCSCTTCEEEC
T ss_pred c--CCCCEEECCCCCCCccCh
Confidence 3 689999999999976544
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=385.47 Aligned_cols=385 Identities=23% Similarity=0.186 Sum_probs=271.5
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccC-CccccCCCCCCeeeCcCCCCCCc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAI-PANLSSGSNLIKLSTDSNNLVRD 81 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~ 81 (746)
++++.++|. ..++|++|||++|.|++..|..|.++++|++|||++|.+.+.+ |..|.++++|++|+|++|.+.+.
T Consensus 13 ~~~L~~vP~----lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~ 88 (844)
T 3j0a_A 13 FCNLTQVPQ----VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFL 88 (844)
T ss_dssp CCCSSCCCS----SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEE
T ss_pred CCCCCCCCC----CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCccc
Confidence 456666665 3478999999999999889999999999999999999766566 88899999999999999999998
Q ss_pred cchhhcCCCCCCEEEccCCCCc----C--cccCCCCCCEEeccCCCcc------cccCCCCCcEeeCccCcccccCCccc
Q 041467 82 ILTEICSLFKLERLRIDCGGRI----D--SLGHLKSLLLLSLAFNQFL------SLSNASSLEMIEFSRNQFSGGVSVDF 149 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~~----~--~~~~l~~L~~L~Ls~N~l~------~l~~l~~L~~L~Ls~N~l~~~~~~~~ 149 (746)
.|..|.++++|++|+|+.|... . .++++++|+.|+|++|.+. .|.++++|++|+|++|.+++..+..|
T Consensus 89 ~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 89 HPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL 168 (844)
T ss_dssp CTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGG
T ss_pred CHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHc
Confidence 8999999999999999986543 2 3889999999999999984 36789999999999999999999999
Q ss_pred cCC--CCCCEEEccCCCCCCCCCCCccccccccCCC------CCCEEEcccccccccCChhhhhc---------------
Q 041467 150 SRL--KNLSWLNLGVNNLGSGTANELDFINLLTNCS------KLERLYFNRNGFEGVLPHSIANL--------------- 206 (746)
Q Consensus 150 ~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~------~L~~L~Ls~N~l~~~~p~~~~~l--------------- 206 (746)
..+ ++|+.|+|+.|.+.+..+ ..+..++ +|+.|++++|.+++..|..+...
T Consensus 169 ~~l~~~~L~~L~L~~n~l~~~~~------~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~ 242 (844)
T 3j0a_A 169 EPLQGKTLSFFSLAANSLYSRVS------VDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI 242 (844)
T ss_dssp HHHHHCSSCCCEECCSBSCCCCC------CCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSC
T ss_pred ccccCCccceEECCCCccccccc------cchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccc
Confidence 888 899999999999987332 2233332 36777777776665555444321
Q ss_pred ----------------------ccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecc
Q 041467 207 ----------------------SSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIG 264 (746)
Q Consensus 207 ----------------------~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 264 (746)
..+|+.|++++|.+.+..|..|..+++|+.|+|++|++.+..|..|..+++|++|+|+
T Consensus 243 ~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls 322 (844)
T 3j0a_A 243 MGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLS 322 (844)
T ss_dssp CBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEE
T ss_pred ccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECC
Confidence 1246666666666666666666666666666666666666666666666666666666
Q ss_pred cccccccccccccccC---hHHhhhccCCCCCCccccCCCCCCeeeecCCcCccc------------------cc-----
Q 041467 265 GNHLQGSILSSLGNLT---LQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTST------------------LP----- 318 (746)
Q Consensus 265 ~N~l~~~~~~~l~~l~---~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~------------------~p----- 318 (746)
+|.+++..+..+..+. .+++.+|++.+..+..|..+++|++|+|++|.+++. +|
T Consensus 323 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~ 402 (844)
T 3j0a_A 323 YNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLT 402 (844)
T ss_dssp SCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTT
T ss_pred CCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccc
Confidence 6666655555444333 333345666655555666666666666666665421 11
Q ss_pred -----------------hhhhhcccccceEEccCccccc------------------------------cCchhhhcccC
Q 041467 319 -----------------QQILSVTTLSLYLELDNNLLNG------------------------------SLPPEVGNLKN 351 (746)
Q Consensus 319 -----------------~~~~~l~~l~~~L~Ls~N~l~~------------------------------~~p~~~~~l~~ 351 (746)
..+..+++| +.|+|++|++++ ..|..|..+++
T Consensus 403 l~~L~ls~N~l~~l~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~ 481 (844)
T 3j0a_A 403 ANLIHLSENRLENLDILYFLLRVPHL-QILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSH 481 (844)
T ss_dssp CCEEECCSCCCCSSTTHHHHTTCTTC-CEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCC
T ss_pred cceeecccCccccCchhhhhhcCCcc-ceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCccc
Confidence 012234444 345555555543 22334555666
Q ss_pred Cceeec---------CCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCC
Q 041467 352 LLRLHI---------PEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNG 399 (746)
Q Consensus 352 L~~L~l---------p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 399 (746)
|+.|++ |..+..++.|+.|+|++|++++.+|... ..++..+++.+|.
T Consensus 482 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~-~~~L~~L~Ls~N~ 537 (844)
T 3j0a_A 482 LQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDL-PANLEILDISRNQ 537 (844)
T ss_dssp EECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCC-CSCCCEEEEEEEC
T ss_pred ccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhh-hccccEEECCCCc
Confidence 666643 3445677777777777777777555332 2566677777663
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-39 Score=369.06 Aligned_cols=376 Identities=14% Similarity=0.087 Sum_probs=297.8
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCC-c
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVR-D 81 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~ 81 (746)
+|++...++..+..+++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|++++|.+.+ .
T Consensus 65 ~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 144 (606)
T 3vq2_A 65 RCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCK 144 (606)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCC
T ss_pred CCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCccccee
Confidence 455666666677789999999999999998889999999999999999999998777899999999999999999976 6
Q ss_pred cchhhcCCCCCCEEEccCCCCc----CcccCCCCCC----EEeccCCCcccc----------------------------
Q 041467 82 ILTEICSLFKLERLRIDCGGRI----DSLGHLKSLL----LLSLAFNQFLSL---------------------------- 125 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~----~L~Ls~N~l~~l---------------------------- 125 (746)
+|..++++++|++|+++.+... ..++.+++|+ .|++++|.+..+
T Consensus 145 lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~ 224 (606)
T 3vq2_A 145 LPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTC 224 (606)
T ss_dssp CCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHH
T ss_pred chHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHH
Confidence 7999999999999999886432 2233333222 444444444211
Q ss_pred ---------------------------------------------------------cCCCCCcEeeCccCcccccCCcc
Q 041467 126 ---------------------------------------------------------SNASSLEMIEFSRNQFSGGVSVD 148 (746)
Q Consensus 126 ---------------------------------------------------------~~l~~L~~L~Ls~N~l~~~~~~~ 148 (746)
..+++|+.|++++|.++. +| .
T Consensus 225 ~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l~-~ 302 (606)
T 3vq2_A 225 LQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKY-LE-D 302 (606)
T ss_dssp HHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCC-CC-C
T ss_pred hccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchh-hh-h
Confidence 112344444444444432 22 4
Q ss_pred ccCCCCCCEEEccCCCCCCCCCCC-------------ccccccccCCCCCCEEEccccccccc--CChhhhhcccccceE
Q 041467 149 FSRLKNLSWLNLGVNNLGSGTANE-------------LDFINLLTNCSKLERLYFNRNGFEGV--LPHSIANLSSTIKQI 213 (746)
Q Consensus 149 ~~~l~~L~~L~Ls~N~l~~~~~~~-------------~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~~L~~L 213 (746)
+..+++|+.|++++|.+...+.-. ...+..+..+++|++|++++|.+++. +|..+..++ +|++|
T Consensus 303 l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~-~L~~L 381 (606)
T 3vq2_A 303 VPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTN-SLRHL 381 (606)
T ss_dssp CCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCS-CCCEE
T ss_pred ccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCC-cccEe
Confidence 555666666666666664332100 00112466789999999999999866 488899987 79999
Q ss_pred EcccCcccccCCccccCCCCCCeeecccccceecCC-cCCCCCCCCceeecccccccccccccccc---cChHHhhhccC
Q 041467 214 AMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIP-PLIGETPNLQLLNIGGNHLQGSILSSLGN---LTLQTYLFNNL 289 (746)
Q Consensus 214 ~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~---l~~l~~l~n~l 289 (746)
++++|.+++ +|..|.++++|+.|++++|++.+..| ..+..+++|++|++++|.+++..|..+.. |+.+++.+|.+
T Consensus 382 ~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 460 (606)
T 3vq2_A 382 DLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSF 460 (606)
T ss_dssp ECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEE
T ss_pred ECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcC
Confidence 999999986 77899999999999999999998888 68999999999999999999988776655 45555668999
Q ss_pred CC-CCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeec--------CCC
Q 041467 290 QG-NIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI--------PEY 360 (746)
Q Consensus 290 ~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l--------p~~ 360 (746)
.+ .+|..|+.+++|+.|+|++|++++..|..+..+++| +.|++++|++++..|..++++++|+.|++ |..
T Consensus 461 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~ 539 (606)
T 3vq2_A 461 KDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRL-QLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGI 539 (606)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC-CEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESC
T ss_pred CCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccC-CEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHh
Confidence 88 479999999999999999999998889999999999 68999999999988999999999999965 455
Q ss_pred CCCCC-CCCEEEccCCcCcccCCC
Q 041467 361 PENLS-FFELLNLSYNYFGSEVPT 383 (746)
Q Consensus 361 ~~~l~-~L~~L~ls~N~l~~~~p~ 383 (746)
+..++ +|+.|++++|.+....+.
T Consensus 540 ~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 540 LQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp GGGSCTTCCEEECCSCCCCCSSTT
T ss_pred HhhhcccCcEEEccCCCcccCCcc
Confidence 66776 599999999999987664
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-39 Score=365.94 Aligned_cols=380 Identities=18% Similarity=0.196 Sum_probs=272.9
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 82 (746)
+|.+.++|...+ ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+.+..
T Consensus 14 ~~~l~~ip~~~~---~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 90 (549)
T 2z81_A 14 SRSFTSIPSGLT---AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLS 90 (549)
T ss_dssp TSCCSSCCSCCC---TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCC
T ss_pred CCccccccccCC---CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccC
Confidence 456666666443 68999999999999888899999999999999999999888889999999999999999998888
Q ss_pred chhhcCCCCCCEEEccCCCC-----cCcccCCCCCCEEeccCCCc------ccccCCCCCcEeeCccCcccccCCccccC
Q 041467 83 LTEICSLFKLERLRIDCGGR-----IDSLGHLKSLLLLSLAFNQF------LSLSNASSLEMIEFSRNQFSGGVSVDFSR 151 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~~-----~~~~~~l~~L~~L~Ls~N~l------~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 151 (746)
|..|+++++|++|++++|.. +..++++++|+.|++++|++ ..+.++++|+.|++++|++++..|..++.
T Consensus 91 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 170 (549)
T 2z81_A 91 SSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170 (549)
T ss_dssp HHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred HHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc
Confidence 88899999999999988643 35688999999999999983 24678899999999999999888888776
Q ss_pred CCCCCEEEccCCCCCCCCCCCcccccc-ccCCCCCCEEEccccccccc---------------------------CChhh
Q 041467 152 LKNLSWLNLGVNNLGSGTANELDFINL-LTNCSKLERLYFNRNGFEGV---------------------------LPHSI 203 (746)
Q Consensus 152 l~~L~~L~Ls~N~l~~~~~~~~~~~~~-~~~l~~L~~L~Ls~N~l~~~---------------------------~p~~~ 203 (746)
+++|+.|+++.|.+.. ++.. +..+++|++|++++|++++. .+..+
T Consensus 171 l~~L~~L~l~~n~~~~-------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l 243 (549)
T 2z81_A 171 IRDIHHLTLHLSESAF-------LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNEL 243 (549)
T ss_dssp CSEEEEEEEECSBSTT-------HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHH
T ss_pred cccCceEecccCcccc-------cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHH
Confidence 5555555444444321 1111 12233333333333333221 11100
Q ss_pred --------------------------------------------------------------hhcccccceEEcccCccc
Q 041467 204 --------------------------------------------------------------ANLSSTIKQIAMGSNRIS 221 (746)
Q Consensus 204 --------------------------------------------------------------~~l~~~L~~L~l~~N~i~ 221 (746)
.....+|+.|++++|+++
T Consensus 244 ~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~ 323 (549)
T 2z81_A 244 LKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF 323 (549)
T ss_dssp HGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC
T ss_pred HHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc
Confidence 011125777777777776
Q ss_pred ccCCccc-cCCCCCCeeecccccceecCC---cCCCCCCCCceeecccccccccc-----cccccccChHHhhhccCCCC
Q 041467 222 STIPHGI-RNLVNLNWLTMESSQLIGTIP---PLIGETPNLQLLNIGGNHLQGSI-----LSSLGNLTLQTYLFNNLQGN 292 (746)
Q Consensus 222 ~~~p~~~-~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~-----~~~l~~l~~l~~l~n~l~~~ 292 (746)
.+|..+ .++++|++|++++|++.+.+| ..++.+++|++|+|++|++++.. ...+.+|+.+++.+|++. .
T Consensus 324 -~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 401 (549)
T 2z81_A 324 -LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-P 401 (549)
T ss_dssp -CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-C
T ss_pred -cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-c
Confidence 466655 568888888888888887653 34677888888888888887532 345566667777778877 5
Q ss_pred CCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeec--------CCCCCCC
Q 041467 293 IPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI--------PEYPENL 364 (746)
Q Consensus 293 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l--------p~~~~~l 364 (746)
+|..+..+++|++|++++|+++ .+|..+. ..+ +.|++++|++++.+ +.+++|+.|++ |. ...+
T Consensus 402 lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L-~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~~ip~-~~~l 472 (549)
T 2z81_A 402 MPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTL-EVLDVSNNNLDSFS----LFLPRLQELYISRNKLKTLPD-ASLF 472 (549)
T ss_dssp CCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTC-SEEECCSSCCSCCC----CCCTTCCEEECCSSCCSSCCC-GGGC
T ss_pred CChhhcccccccEEECCCCCcc-cccchhc--CCc-eEEECCCCChhhhc----ccCChhcEEECCCCccCcCCC-cccC
Confidence 7778888888888888888887 4565442 355 57888888887642 46777777754 33 2457
Q ss_pred CCCCEEEccCCcCcccCCC-CCccCCCCeeeEecCCCcCC
Q 041467 365 SFFELLNLSYNYFGSEVPT-KGVFNNKTRFSIIGNGKLCG 403 (746)
Q Consensus 365 ~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~l~~ 403 (746)
+.|+.||+++|++++.+|. ...+..+..+++.+|+..|.
T Consensus 473 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 473 PVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp TTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred ccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 7888888888888887664 34566777788888876553
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=360.21 Aligned_cols=180 Identities=21% Similarity=0.289 Sum_probs=149.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC------C
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI------D 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~------~ 541 (746)
.++|+..+.||+|+||+||+ ||||++.... ....+.+.+|+++|++++|||||++++++... +
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 35799999999999999997 9999986542 33456788999999999999999999997653 4
Q ss_pred cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 542 FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
..|+|||||. |+|. ...+++.++..+++||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 6799999996 5554 56799999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .......+.+||++|||||++.+..+ ++.++||||+||++|
T Consensus 209 ~~~~~----~~~~~~~~~~GT~~Y~APEv~~~~~~--~~~~~DiWSlG~il~ 254 (398)
T 4b99_A 209 CTSPA----EHQYFMTEYVATRWYRAPELMLSLHE--YTQAIDLWSVGCIFG 254 (398)
T ss_dssp -----------CCCCCSSCCCCTTCCHHHHTTCSC--CCTHHHHHHHHHHHH
T ss_pred ccCcc----ccccccccceeChHhcCHHHhcCCCC--CCChhheehhHHHHH
Confidence 43221 11223456899999999999988654 244699999999999
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=363.71 Aligned_cols=379 Identities=20% Similarity=0.187 Sum_probs=239.3
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
+++++|+|++|.+++..+.+|.++++|++|+|++|++++..|..|+++++|++|+|++|.+.+..|..|.++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46778888888887766777888888888888888887766677778888888888888777666677788888888888
Q ss_pred cCCCCc----CcccCCCCCCEEeccCCCccc------ccCCCCCcEeeCccCcccccCCccccCCCCC----CEEEccCC
Q 041467 98 DCGGRI----DSLGHLKSLLLLSLAFNQFLS------LSNASSLEMIEFSRNQFSGGVSVDFSRLKNL----SWLNLGVN 163 (746)
Q Consensus 98 ~~~~~~----~~~~~l~~L~~L~Ls~N~l~~------l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L----~~L~Ls~N 163 (746)
+.+... ..++++++|++|+|++|.+.. +.++++|+.|++++|++++..+..|+.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 765432 247777888888888887642 4567778888888888777777777777766 67777777
Q ss_pred CCCCCCCCCc----------------------------------------------------------------------
Q 041467 164 NLGSGTANEL---------------------------------------------------------------------- 173 (746)
Q Consensus 164 ~l~~~~~~~~---------------------------------------------------------------------- 173 (746)
.+++..+..+
T Consensus 188 ~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 267 (570)
T 2z63_A 188 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267 (570)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEET
T ss_pred CceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcc
Confidence 6655433211
Q ss_pred -----cccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCcc-c-------------------
Q 041467 174 -----DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHG-I------------------- 228 (746)
Q Consensus 174 -----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~-~------------------- 228 (746)
..+..+..+++|+.|++++|.++ .+|..+..+ .|+.|++++|.+. .+|.. +
T Consensus 268 ~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~--~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~~~~~~~ 343 (570)
T 2z63_A 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF--GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKGGNAFSE 343 (570)
T ss_dssp TEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC--CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBSCCBCCC
T ss_pred hhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC--CccEEeeccCccc-ccCcccccccCEEeCcCCcccccccc
Confidence 01234556788888888888887 577777665 5777777777776 44442 0
Q ss_pred cCCCCCCeeecccccceecC--CcCCCCCCCCceeecccccccccccc--cccccChHHhhhccCCCCCC-ccccCCCCC
Q 041467 229 RNLVNLNWLTMESSQLIGTI--PPLIGETPNLQLLNIGGNHLQGSILS--SLGNLTLQTYLFNNLQGNIP-SSLANCKSL 303 (746)
Q Consensus 229 ~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~--~l~~l~~l~~l~n~l~~~~p-~~~~~l~~L 303 (746)
..+++|++|++++|++.+.. |..+..+++|++|++++|.+++..+. .+.+|+.+++.+|.+.+..| ..+..+++|
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 423 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTC
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCC
Confidence 34445555555555554332 34445555555555555555543322 22233344444555555444 345666666
Q ss_pred CeeeecCCcCccccchhhhhcccccceEEccCcccc-ccCchhhhcccCCceeec---------CCCCCCCCCCCEEEcc
Q 041467 304 LGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLN-GSLPPEVGNLKNLLRLHI---------PEYPENLSFFELLNLS 373 (746)
Q Consensus 304 ~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l---------p~~~~~l~~L~~L~ls 373 (746)
++|++++|++++..|..+..+++| +.|++++|.++ +.+|..+..+++|+.|++ |..+..+++|+.|+++
T Consensus 424 ~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 502 (570)
T 2z63_A 424 IYLDISHTHTRVAFNGIFNGLSSL-EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMA 502 (570)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTC-CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEeCcCCcccccchhhhhcCCcC-cEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCC
Confidence 666666666665556556666666 45666666665 456666666666666643 3345555666666666
Q ss_pred CCcCcccCCCC-CccCCCCeeeEecCCCc
Q 041467 374 YNYFGSEVPTK-GVFNNKTRFSIIGNGKL 401 (746)
Q Consensus 374 ~N~l~~~~p~~-~~~~~~~~~~~~~n~~l 401 (746)
+|++++.+|.. ..+..+..+++.+|+..
T Consensus 503 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 531 (570)
T 2z63_A 503 SNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531 (570)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCcCCCCCHHHhhcccCCcEEEecCCccc
Confidence 66666654432 23445555555555543
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-38 Score=350.01 Aligned_cols=350 Identities=17% Similarity=0.169 Sum_probs=284.1
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccC-CccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAI-PANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+.+..|..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 78999999999999888999999999999999999997555 56799999999999999999888899999999999999
Q ss_pred ccCCCCc------CcccCCCCCCEEeccCCCccc------ccCCCCCcEeeCccCcccccCCccccCC--CCCCEEEccC
Q 041467 97 IDCGGRI------DSLGHLKSLLLLSLAFNQFLS------LSNASSLEMIEFSRNQFSGGVSVDFSRL--KNLSWLNLGV 162 (746)
Q Consensus 97 l~~~~~~------~~~~~l~~L~~L~Ls~N~l~~------l~~l~~L~~L~Ls~N~l~~~~~~~~~~l--~~L~~L~Ls~ 162 (746)
++++... ..++++++|++|+|++|++.. +.++++|++|++++|++++..+..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9987653 238899999999999999943 5678999999999999999999888876 7899999999
Q ss_pred CCCCCCCCCCcc--ccccccCCCCCCEEEcccccccccCChhhhhcc--cccceEEcccCccccc----------CCccc
Q 041467 163 NNLGSGTANELD--FINLLTNCSKLERLYFNRNGFEGVLPHSIANLS--STIKQIAMGSNRISST----------IPHGI 228 (746)
Q Consensus 163 N~l~~~~~~~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~~L~~L~l~~N~i~~~----------~p~~~ 228 (746)
|.+.......+. ....+..+++|+.|++++|++++..|..+.... .+|+.|++++|.+.+. .+..+
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 999875443211 112244678999999999999998888887651 2799999998866542 12222
Q ss_pred cC--CCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccc---cChHHhhhccCCCCCCccccCCCCC
Q 041467 229 RN--LVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGN---LTLQTYLFNNLQGNIPSSLANCKSL 303 (746)
Q Consensus 229 ~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~---l~~l~~l~n~l~~~~p~~~~~l~~L 303 (746)
.. .++|++|++++|++.+..|..|+.+++|++|+|++|++++..+..+.. |+.|++.+|.+.+..|..|+++++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 22 368999999999999999999999999999999999999776665544 4444555777777777778888888
Q ss_pred CeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCCC
Q 041467 304 LGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPT 383 (746)
Q Consensus 304 ~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p~ 383 (746)
++|+|++|++++..|..+..+++| ++|+|++|++++..+.. +..+++|+.|++++|++++.+|.
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~---------------~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNL-KELALDTNQLKSVPDGI---------------FDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTC-CEEECCSSCCSCCCTTT---------------TTTCTTCCEEECCSSCBCCCTTT
T ss_pred CEEECCCCcccccChhhccccccc-cEEECCCCccccCCHhH---------------hccCCcccEEEccCCCcccCCCc
Confidence 888888888887667777788887 57888888887433333 34567778999999999998884
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-38 Score=353.93 Aligned_cols=369 Identities=20% Similarity=0.204 Sum_probs=242.3
Q ss_pred CCCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCc
Q 041467 2 SSNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRD 81 (746)
Q Consensus 2 ~~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 81 (746)
++|++..+|.... ++|++|+|++|.+++..|..|.++++|++|+|++|+|++..|..|+++++|++|+|++|++. .
T Consensus 8 s~n~l~~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 83 (520)
T 2z7x_B 8 SKNGLIHVPKDLS---QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-K 83 (520)
T ss_dssp TTSCCSSCCCSCC---TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-E
T ss_pred CCCCccccccccc---ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-e
Confidence 3456666554333 78999999999999888899999999999999999999888999999999999999999996 5
Q ss_pred cchhhcCCCCCCEEEccCCCC-----cCcccCCCCCCEEeccCCCcc--cccCCCCC--cEeeCccCcc--cccCCcccc
Q 041467 82 ILTEICSLFKLERLRIDCGGR-----IDSLGHLKSLLLLSLAFNQFL--SLSNASSL--EMIEFSRNQF--SGGVSVDFS 150 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~-----~~~~~~l~~L~~L~Ls~N~l~--~l~~l~~L--~~L~Ls~N~l--~~~~~~~~~ 150 (746)
+|.. .+++|++|++++|.. +..|+++++|++|+|++|++. .+..+++| +.|++++|++ .+..|..|.
T Consensus 84 lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~ 161 (520)
T 2z7x_B 84 ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQ 161 (520)
T ss_dssp EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTT
T ss_pred cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeeccccccccccccccc
Confidence 7766 899999999998653 357899999999999999994 46677788 9999999999 666666665
Q ss_pred C--------------------------CCCCCEEEccCCC------------------------------CCCCCCCCcc
Q 041467 151 R--------------------------LKNLSWLNLGVNN------------------------------LGSGTANELD 174 (746)
Q Consensus 151 ~--------------------------l~~L~~L~Ls~N~------------------------------l~~~~~~~~~ 174 (746)
. +++|+.|++++|. +++.... .
T Consensus 162 ~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~--~ 239 (520)
T 2z7x_B 162 DFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFI--R 239 (520)
T ss_dssp TCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHH--H
T ss_pred ccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHH--H
Confidence 5 3334444444432 1100000 0
Q ss_pred ccccccCCCCCCEEEcccccccccCChhh-----hhcccccceEEcccCcccccCC-ccc--------------------
Q 041467 175 FINLLTNCSKLERLYFNRNGFEGVLPHSI-----ANLSSTIKQIAMGSNRISSTIP-HGI-------------------- 228 (746)
Q Consensus 175 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~~L~~L~l~~N~i~~~~p-~~~-------------------- 228 (746)
++..+ .+++|++|++++|+++|.+|..+ ..+. .|+.+++++|.+ .+| ..+
T Consensus 240 ~~~~~-~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~-~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~ 315 (520)
T 2z7x_B 240 ILQLV-WHTTVWYFSISNVKLQGQLDFRDFDYSGTSLK-ALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMV 315 (520)
T ss_dssp HHHHH-HTSSCSEEEEEEEEEESCCCCCCCCCCSCCCC-EEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCC
T ss_pred HHHHh-hhCcccEEEeecccccCccccchhhcccccCc-eeEeccccccce--ecchhhhhcccccCceeEEEcCCCccc
Confidence 00000 12356666667777666666655 4444 455555555555 233 222
Q ss_pred -----cCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccc--ccccc---ccccChHHhhhccCCCCCCc-cc
Q 041467 229 -----RNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG--SILSS---LGNLTLQTYLFNNLQGNIPS-SL 297 (746)
Q Consensus 229 -----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~---l~~l~~l~~l~n~l~~~~p~-~~ 297 (746)
..+++|++|++++|++.+.+|..++.+++|++|+|++|++++ .+|.. +.+|+.|++.+|.+.+.+|. .+
T Consensus 316 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~ 395 (520)
T 2z7x_B 316 HMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDC 395 (520)
T ss_dssp CCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSC
T ss_pred cccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchh
Confidence 456666666666666666666666666666666666666664 22322 33344444445666654443 35
Q ss_pred cCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcC
Q 041467 298 ANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYF 377 (746)
Q Consensus 298 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l 377 (746)
..+++|++|++++|++++.+|..+. ..+ +.|++++|+++ .+|.++. .++.|+.|++++|++
T Consensus 396 ~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L-~~L~Ls~N~l~-~ip~~~~---------------~l~~L~~L~L~~N~l 456 (520)
T 2z7x_B 396 SWTKSLLSLNMSSNILTDTIFRCLP--PRI-KVLDLHSNKIK-SIPKQVV---------------KLEALQELNVASNQL 456 (520)
T ss_dssp CCCTTCCEEECCSSCCCGGGGGSCC--TTC-CEEECCSSCCC-CCCGGGG---------------GCTTCCEEECCSSCC
T ss_pred ccCccCCEEECcCCCCCcchhhhhc--ccC-CEEECCCCccc-ccchhhh---------------cCCCCCEEECCCCcC
Confidence 5666666666666666655555443 344 45666666665 5555444 456667778888888
Q ss_pred cccCCC--CCccCCCCeeeEecCCCcC
Q 041467 378 GSEVPT--KGVFNNKTRFSIIGNGKLC 402 (746)
Q Consensus 378 ~~~~p~--~~~~~~~~~~~~~~n~~l~ 402 (746)
++ +|. ...+..+..+++.+|+..|
T Consensus 457 ~~-l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 457 KS-VPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp CC-CCTTTTTTCTTCCEEECCSSCBCC
T ss_pred Cc-cCHHHhccCCcccEEECcCCCCcc
Confidence 74 443 2345566677777776554
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=347.88 Aligned_cols=186 Identities=22% Similarity=0.246 Sum_probs=151.9
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE------------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCc
Q 041467 476 SKATNNFSPANKIREGGFNIVYN------------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDF 542 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~ 542 (746)
....++|++.+.||+|+||+||+ ||||++... ....++.+|+++++.+ +|||||+++++|.+.+.
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 34567899999999999999995 899987543 2345688999999998 69999999999999999
Q ss_pred ccchhhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC-CcEEEccccccccccCC
Q 041467 543 EGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 543 ~~lv~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~-~~~ki~DfGla~~~~~~ 619 (746)
.|+|||||++|+|. ...+++.+++.++.|++.||+|||++ +||||||||+|||++.+ +.+||+|||+|+.....
T Consensus 95 ~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~ 171 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT 171 (361)
T ss_dssp EEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTC
T ss_pred EEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc
Confidence 99999999999986 45799999999999999999999999 99999999999999876 89999999999865432
Q ss_pred CCCCC--------------------cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTT--------------------AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~--------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ........+.+||++|||||++.+... ++.++||||+||++|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--y~~~~DiWSlG~il~ 238 (361)
T 4f9c_A 172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPN--QTTAIDMWSAGVIFL 238 (361)
T ss_dssp SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSC--CCTHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCC--CCCccchhhhHHHHH
Confidence 21100 001122345789999999999987643 244699999999999
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=360.82 Aligned_cols=213 Identities=23% Similarity=0.241 Sum_probs=167.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhH---HHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASR---SFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~---~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
..++|+..+.||+|+||+||+ ||||++.+.. ..... ..++|+.+++.++|||||+++++|.+.+.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 357899999999999999996 9999986542 12222 23445677888999999999999999999
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
.|+|||||++|+|. ...+++.+++.|+.||+.||+|||++ +||||||||+||||+.+|++||+|||+|+.+.
T Consensus 267 lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999996 46799999999999999999999999 99999999999999999999999999998763
Q ss_pred CCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceeec-----cccc-----cc----cchhhcc
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFAL-----NEKK-----QN----KSILKSA 682 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~~-----~~~~-----~~----~~i~~~~ 682 (746)
.. ...+.+||+.|||||++.. ..|+. ++||||+||++|. ..+. .. ..+....
T Consensus 344 ~~----------~~~t~~GTp~YmAPEvl~~~~~y~~---~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~ 410 (689)
T 3v5w_A 344 KK----------KPHASVGTHGYMAPEVLQKGVAYDS---SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410 (689)
T ss_dssp SC----------CCCSCCSCGGGCCHHHHSTTCCCCT---HHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCC
T ss_pred CC----------CCCCccCCcCccCHHHHhCCCCCCc---HHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Confidence 32 1234789999999999975 44544 5999999999991 1111 00 1111111
Q ss_pred c----cCCCccHHHHHHhhCCCCCCCCC
Q 041467 683 G----IKGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 683 ~----~~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
. ..+.+..+.+..|+.+++..|+.
T Consensus 411 ~~~p~~~S~~a~dLI~~lL~~dP~~Rl~ 438 (689)
T 3v5w_A 411 VELPDSFSPELRSLLEGLLQRDVNRRLG 438 (689)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSCGGGCTT
T ss_pred CCCCccCCHHHHHHHHHHccCCHhHCCC
Confidence 1 12345567778888887776665
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-38 Score=356.98 Aligned_cols=367 Identities=19% Similarity=0.176 Sum_probs=261.8
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCC-c
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVR-D 81 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~ 81 (746)
+|++...++..+..+++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..|+++++|++|+|++|.+.+ .
T Consensus 35 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 114 (549)
T 2z81_A 35 FNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLG 114 (549)
T ss_dssp SSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSC
T ss_pred CCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccc
Confidence 455666666677789999999999999998888999999999999999999998777779999999999999999976 4
Q ss_pred cchhhcCCCCCCEEEccCCCCc-----CcccCCCCCCEEeccCCCccc-----ccCCCCCcEeeCccCcccccCCccccC
Q 041467 82 ILTEICSLFKLERLRIDCGGRI-----DSLGHLKSLLLLSLAFNQFLS-----LSNASSLEMIEFSRNQFSGGVSVDFSR 151 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~~-----~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 151 (746)
.|..+.++++|++|+++.+... ..+.++++|+.|++++|++.. +.++++|+.|++++|.+....+..+..
T Consensus 115 ~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~ 194 (549)
T 2z81_A 115 VTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADI 194 (549)
T ss_dssp SSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHS
T ss_pred hhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhh
Confidence 6778999999999999886532 468899999999999999843 455666666666666655333333345
Q ss_pred CCCCCEEEccCCCCCCCCCCCcc---------------------------------------------------------
Q 041467 152 LKNLSWLNLGVNNLGSGTANELD--------------------------------------------------------- 174 (746)
Q Consensus 152 l~~L~~L~Ls~N~l~~~~~~~~~--------------------------------------------------------- 174 (746)
+++|++|++++|.+++.......
T Consensus 195 l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~ 274 (549)
T 2z81_A 195 LSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSES 274 (549)
T ss_dssp TTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTT
T ss_pred cccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccch
Confidence 56666666666665542100000
Q ss_pred ---------------------------ccccccCCCCCCEEEcccccccccCChhhh-hcccccceEEcccCcccccCCc
Q 041467 175 ---------------------------FINLLTNCSKLERLYFNRNGFEGVLPHSIA-NLSSTIKQIAMGSNRISSTIPH 226 (746)
Q Consensus 175 ---------------------------~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~~L~~L~l~~N~i~~~~p~ 226 (746)
++..+..+++|+.|++++|.++ .+|..+. .++ +|+.|++++|++++.+|.
T Consensus 275 ~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~-~L~~L~Ls~N~l~~~~~~ 352 (549)
T 2z81_A 275 DVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLK-SLEFLDLSENLMVEEYLK 352 (549)
T ss_dssp TCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCT-TCCEEECCSSCCCHHHHH
T ss_pred hhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCc-cccEEEccCCcccccccc
Confidence 0000111245777777777775 5676664 565 688888888888876543
Q ss_pred ---cccCCCCCCeeecccccceecCC--cCCCCCCCCceeeccccccccccccccc---ccChHHhhhccCCCCCCcccc
Q 041467 227 ---GIRNLVNLNWLTMESSQLIGTIP--PLIGETPNLQLLNIGGNHLQGSILSSLG---NLTLQTYLFNNLQGNIPSSLA 298 (746)
Q Consensus 227 ---~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~~~~l~---~l~~l~~l~n~l~~~~p~~~~ 298 (746)
.++.+++|++|+|++|++++..+ ..+..+++|++|+|++|+++ .+|..+. +|+.+++.+|.+.+ +|..+.
T Consensus 353 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~ 430 (549)
T 2z81_A 353 NSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP 430 (549)
T ss_dssp HHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC
T ss_pred chhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchhc
Confidence 36777888888888888865432 45777888888888888887 4454443 44555555677663 343332
Q ss_pred CCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeec---------CCCCCCCCCCCE
Q 041467 299 NCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI---------PEYPENLSFFEL 369 (746)
Q Consensus 299 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l---------p~~~~~l~~L~~ 369 (746)
++|++|+|++|+|++. + ..++.| +.|+|++|+++ .+|. ...+++|+.|++ |..+..+++|+.
T Consensus 431 --~~L~~L~Ls~N~l~~~-~---~~l~~L-~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 501 (549)
T 2z81_A 431 --QTLEVLDVSNNNLDSF-S---LFLPRL-QELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQK 501 (549)
T ss_dssp --TTCSEEECCSSCCSCC-C---CCCTTC-CEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCE
T ss_pred --CCceEEECCCCChhhh-c---ccCChh-cEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCE
Confidence 5778888888887753 2 356666 56888888887 6665 456777777754 234567888999
Q ss_pred EEccCCcCcccCC
Q 041467 370 LNLSYNYFGSEVP 382 (746)
Q Consensus 370 L~ls~N~l~~~~p 382 (746)
|++++|++++..|
T Consensus 502 L~l~~N~~~~~~~ 514 (549)
T 2z81_A 502 IWLHTNPWDCSCP 514 (549)
T ss_dssp EECCSSCBCCCHH
T ss_pred EEecCCCccCCCc
Confidence 9999999998877
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=352.88 Aligned_cols=370 Identities=19% Similarity=0.167 Sum_probs=290.6
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 82 (746)
+|++...++..+..+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|++++|.+.+..
T Consensus 37 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 116 (570)
T 2z63_A 37 FNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE 116 (570)
T ss_dssp SCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCST
T ss_pred CCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCC
Confidence 45566666767788899999999999999888888999999999999999999877889999999999999999987766
Q ss_pred chhhcCCCCCCEEEccCCC-----CcCcccCCCCCCEEeccCCCccc-----ccCCCCC----cEeeCccCcccccCC--
Q 041467 83 LTEICSLFKLERLRIDCGG-----RIDSLGHLKSLLLLSLAFNQFLS-----LSNASSL----EMIEFSRNQFSGGVS-- 146 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~-----~~~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L----~~L~Ls~N~l~~~~~-- 146 (746)
+..++++++|++|+++++. .+..++++++|+.|++++|++.. +..+++| +.|++++|.+++..+
T Consensus 117 ~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~ 196 (570)
T 2z63_A 117 NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA 196 (570)
T ss_dssp TCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTT
T ss_pred CccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHH
Confidence 6578999999999998864 24668889999999999998843 3344444 566666665554433
Q ss_pred -------------------------------------------------------------------------------c
Q 041467 147 -------------------------------------------------------------------------------V 147 (746)
Q Consensus 147 -------------------------------------------------------------------------------~ 147 (746)
.
T Consensus 197 ~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~ 276 (570)
T 2z63_A 197 FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIID 276 (570)
T ss_dssp TTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTT
T ss_pred hccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchh
Confidence 3
Q ss_pred cccCCCCCCEEEccCCCCCCCCCCCccccccccCC--------------------CCCCEEEcccccccccCChhhhhcc
Q 041467 148 DFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNC--------------------SKLERLYFNRNGFEGVLPHSIANLS 207 (746)
Q Consensus 148 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l--------------------~~L~~L~Ls~N~l~~~~p~~~~~l~ 207 (746)
.|..+++|+.|++++|.++. +|..+..+ ++|+.|++++|.+.+..+. ..++
T Consensus 277 ~~~~l~~L~~L~l~~~~l~~-------l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~--~~~~ 347 (570)
T 2z63_A 277 LFNCLTNVSSFSLVSVTIER-------VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE--VDLP 347 (570)
T ss_dssp TTGGGTTCSEEEEESCEECS-------CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC--CBCT
T ss_pred hhcCcCcccEEEecCccchh-------hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccc--ccCC
Confidence 34446777777777777764 23333333 4444444444444433332 3444
Q ss_pred cccceEEcccCcccccC--CccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccccc----ccccccCh
Q 041467 208 STIKQIAMGSNRISSTI--PHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSIL----SSLGNLTL 281 (746)
Q Consensus 208 ~~L~~L~l~~N~i~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~----~~l~~l~~ 281 (746)
+|+.|++++|++++.. |..+.++++|++|++++|.+.+..+. +..+++|+.|++++|.+.+..+ ..+.+|+.
T Consensus 348 -~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 348 -SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp -TCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred -CCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 6889999999988654 67888999999999999999866555 8899999999999999987654 33455666
Q ss_pred HHhhhccCCCCCCccccCCCCCCeeeecCCcCc-cccchhhhhcccccceEEccCccccccCchhhhcccCCceeec---
Q 041467 282 QTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT-STLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI--- 357 (746)
Q Consensus 282 l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l--- 357 (746)
+++.+|.+.+..|..|.++++|++|++++|+++ +.+|..+..+++| +.|++++|++++..|.++..+++|+.|++
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 504 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL-TFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC-CEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCC-CEEECCCCccccCChhhhhcccCCCEEeCCCC
Confidence 667788898889999999999999999999997 5789889999999 68999999999888999999999999965
Q ss_pred ------CCCCCCCCCCCEEEccCCcCcccCCCC
Q 041467 358 ------PEYPENLSFFELLNLSYNYFGSEVPTK 384 (746)
Q Consensus 358 ------p~~~~~l~~L~~L~ls~N~l~~~~p~~ 384 (746)
|..+..+++|+.|++++|++++..|..
T Consensus 505 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 505 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred cCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 334678899999999999999998864
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=345.44 Aligned_cols=372 Identities=19% Similarity=0.197 Sum_probs=258.4
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 82 (746)
+|++..+|.... ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..|+.|.++++|++|+|++|.+. .+
T Consensus 40 ~~~L~~ip~~~~---~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~l 115 (562)
T 3a79_B 40 NRNLTHVPKDLP---PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NI 115 (562)
T ss_dssp TSCCCSCCTTSC---TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EE
T ss_pred CCCCccCCCCCC---CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-cc
Confidence 455665554332 67889999999998777788888999999999999998877888888999999999988885 56
Q ss_pred chhhcCCCCCCEEEccCCCCc-----CcccCCCCCCEEeccCCCcc--cccCCCCC--cEeeCccCcc--cccCCccccC
Q 041467 83 LTEICSLFKLERLRIDCGGRI-----DSLGHLKSLLLLSLAFNQFL--SLSNASSL--EMIEFSRNQF--SGGVSVDFSR 151 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~~~-----~~~~~l~~L~~L~Ls~N~l~--~l~~l~~L--~~L~Ls~N~l--~~~~~~~~~~ 151 (746)
|.. .+++|++|++++|... ..|+++++|+.|+|++|++. .+..+++| +.|+|++|++ ++..|..|..
T Consensus 116 p~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~ 193 (562)
T 3a79_B 116 SCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQI 193 (562)
T ss_dssp CSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEE
T ss_pred Ccc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccc
Confidence 665 7888999998886532 46888889999999998884 34555555 8889988888 6666666655
Q ss_pred CC--------------------------CCCEEEccCCCCC------------CCCC-----------C--C-ccccccc
Q 041467 152 LK--------------------------NLSWLNLGVNNLG------------SGTA-----------N--E-LDFINLL 179 (746)
Q Consensus 152 l~--------------------------~L~~L~Ls~N~l~------------~~~~-----------~--~-~~~~~~~ 179 (746)
+. +|+.|++++|... +.+. . . ...+..
T Consensus 194 l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~- 272 (562)
T 3a79_B 194 PNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQF- 272 (562)
T ss_dssp CCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHH-
T ss_pred cCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHh-
Confidence 33 4455555554210 0000 0 0 000011
Q ss_pred cCCCCCCEEEcccccccccCChhh-----hhcc-------------------------cccceEEcccCcccccCCcccc
Q 041467 180 TNCSKLERLYFNRNGFEGVLPHSI-----ANLS-------------------------STIKQIAMGSNRISSTIPHGIR 229 (746)
Q Consensus 180 ~~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~-------------------------~~L~~L~l~~N~i~~~~p~~~~ 229 (746)
...++|++|++++|.++|.+|..+ ..+. .+|+.|++++|.+.... .+.
T Consensus 273 ~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~ 350 (562)
T 3a79_B 273 FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPP 350 (562)
T ss_dssp HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCS
T ss_pred hhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--Ccc
Confidence 112377888888888877777655 2221 13777777777765321 126
Q ss_pred CCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccc--ccc---cccccChHHhhhccCCCCCCc-cccCCCCC
Q 041467 230 NLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGS--ILS---SLGNLTLQTYLFNNLQGNIPS-SLANCKSL 303 (746)
Q Consensus 230 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~~~---~l~~l~~l~~l~n~l~~~~p~-~~~~l~~L 303 (746)
.+++|++|++++|++.+.+|..++++++|++|+|++|++++. .|. .+.+|+.+++.+|++.+.+|. .+..+++|
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 788899999999999888888888899999999999988863 233 344556666668888874554 57788888
Q ss_pred CeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCCC
Q 041467 304 LGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPT 383 (746)
Q Consensus 304 ~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p~ 383 (746)
+.|++++|++++.+|..+. ..+ +.|+|++|+++ .+|..+. .++.|+.|++++|++++..+.
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L-~~L~L~~N~l~-~ip~~~~---------------~l~~L~~L~L~~N~l~~l~~~ 491 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKV-KVLDLHNNRIM-SIPKDVT---------------HLQALQELNVASNQLKSVPDG 491 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTC-SEEECCSSCCC-CCCTTTT---------------SSCCCSEEECCSSCCCCCCTT
T ss_pred CEEECCCCCCCcchhhhhc--CcC-CEEECCCCcCc-ccChhhc---------------CCCCCCEEECCCCCCCCCCHH
Confidence 8888888888877776553 456 57888888887 5665554 455667788888888753332
Q ss_pred -CCccCCCCeeeEecCCCcC
Q 041467 384 -KGVFNNKTRFSIIGNGKLC 402 (746)
Q Consensus 384 -~~~~~~~~~~~~~~n~~l~ 402 (746)
...+..+..+++.+|+..|
T Consensus 492 ~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 492 VFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp STTTCTTCCCEECCSCCBCC
T ss_pred HHhcCCCCCEEEecCCCcCC
Confidence 3445666677777777655
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-37 Score=345.55 Aligned_cols=348 Identities=18% Similarity=0.187 Sum_probs=267.0
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCC-c
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVR-D 81 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~ 81 (746)
+|.+...++..+..+++|++|+|++|++++..|..|+++++|++|||++|+|+ .+|.. .+++|++|+|++|.+.+ .
T Consensus 30 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~ 106 (520)
T 2z7x_B 30 QNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALP 106 (520)
T ss_dssp SSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCC
T ss_pred CCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCcccccc
Confidence 45555555556777899999999999999888999999999999999999999 57766 89999999999999987 5
Q ss_pred cchhhcCCCCCCEEEccCCCCc-CcccCCCCC--CEEeccCCCc-------ccccC------------------------
Q 041467 82 ILTEICSLFKLERLRIDCGGRI-DSLGHLKSL--LLLSLAFNQF-------LSLSN------------------------ 127 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~~-~~~~~l~~L--~~L~Ls~N~l-------~~l~~------------------------ 127 (746)
+|..++++++|++|+++++... ..+..+++| +.|++++|++ ..+..
T Consensus 107 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~ 186 (520)
T 2z7x_B 107 ICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSV 186 (520)
T ss_dssp CCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCC
T ss_pred chhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhh
Confidence 7899999999999999986654 456677777 8888888776 12222
Q ss_pred --CC---------------------------------------------------------CCcEeeCccCcccccCCcc
Q 041467 128 --AS---------------------------------------------------------SLEMIEFSRNQFSGGVSVD 148 (746)
Q Consensus 128 --l~---------------------------------------------------------~L~~L~Ls~N~l~~~~~~~ 148 (746)
++ +|+.|++++|+++|.+|..
T Consensus 187 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~ 266 (520)
T 2z7x_B 187 KTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFR 266 (520)
T ss_dssp TTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCC
T ss_pred hcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccc
Confidence 22 4555555555555555555
Q ss_pred c-----cCCCCCCEEEccCCCCCCCCCCCccccccccCC---CCCCEEEcccccccccCChhhhhcccccceEEcccCcc
Q 041467 149 F-----SRLKNLSWLNLGVNNLGSGTANELDFINLLTNC---SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRI 220 (746)
Q Consensus 149 ~-----~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i 220 (746)
+ +.+++|+.+++++|.+ ..+. ..+..+ .+|+.|++++|.+.+.. .+..++ +|++|++++|++
T Consensus 267 ~~~~~~~~l~~L~~l~l~~n~~-~~p~------~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~-~L~~L~Ls~n~l 336 (520)
T 2z7x_B 267 DFDYSGTSLKALSIHQVVSDVF-GFPQ------SYIYEIFSNMNIKNFTVSGTRMVHML--CPSKIS-PFLHLDFSNNLL 336 (520)
T ss_dssp CCCCCSCCCCEEEEEEEEECCC-CSCT------HHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCC-CCCEEECCSSCC
T ss_pred hhhcccccCceeEeccccccce-ecch------hhhhcccccCceeEEEcCCCcccccc--chhhCC-cccEEEeECCcc
Confidence 5 5555555555555555 2110 111111 45677777777665321 013555 799999999999
Q ss_pred cccCCccccCCCCCCeeeccccccee--cCCcCCCCCCCCceeeccccccccccccc-c---cccChHHhhhccCCCCCC
Q 041467 221 SSTIPHGIRNLVNLNWLTMESSQLIG--TIPPLIGETPNLQLLNIGGNHLQGSILSS-L---GNLTLQTYLFNNLQGNIP 294 (746)
Q Consensus 221 ~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~-l---~~l~~l~~l~n~l~~~~p 294 (746)
++.+|..|+++++|++|++++|++.+ .+|..++.+++|++|+|++|.+++.+|.. + .+|+.+++.+|.+++.+|
T Consensus 337 ~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 416 (520)
T 2z7x_B 337 TDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIF 416 (520)
T ss_dssp CTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGG
T ss_pred ChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchh
Confidence 99899999999999999999999986 56678999999999999999999855532 3 556667777899988888
Q ss_pred ccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccC
Q 041467 295 SSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSY 374 (746)
Q Consensus 295 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~ 374 (746)
..+. ++|+.|+|++|+|+ .+|..++.+++| +.|++++|+++ .+|.. .+..++.|+.|++++
T Consensus 417 ~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L-~~L~L~~N~l~-~l~~~--------------~~~~l~~L~~L~l~~ 477 (520)
T 2z7x_B 417 RCLP--PRIKVLDLHSNKIK-SIPKQVVKLEAL-QELNVASNQLK-SVPDG--------------IFDRLTSLQKIWLHT 477 (520)
T ss_dssp GSCC--TTCCEEECCSSCCC-CCCGGGGGCTTC-CEEECCSSCCC-CCCTT--------------TTTTCTTCCEEECCS
T ss_pred hhhc--ccCCEEECCCCccc-ccchhhhcCCCC-CEEECCCCcCC-ccCHH--------------HhccCCcccEEECcC
Confidence 7765 79999999999999 899999999999 68999999998 56654 133567789999999
Q ss_pred CcCcccCC
Q 041467 375 NYFGSEVP 382 (746)
Q Consensus 375 N~l~~~~p 382 (746)
|++++..+
T Consensus 478 N~~~c~c~ 485 (520)
T 2z7x_B 478 NPWDCSCP 485 (520)
T ss_dssp SCBCCCHH
T ss_pred CCCcccCC
Confidence 99988655
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-38 Score=355.45 Aligned_cols=175 Identities=19% Similarity=0.244 Sum_probs=155.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|++.+.||+|+||.||+ ||||++........+.+.+|+++|+.++|||||+++++|.+.+..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 46899999999999999997 899998765555567789999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC--CCcEEEccccccccccCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ--DVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~--~~~~ki~DfGla~~~~~~~~ 621 (746)
|++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++. .+.+||+|||+|+.+...
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 9999984 34689999999999999999999999 9999999999999985 489999999999986322
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|||||++.+..|+.+ +||||+||++|
T Consensus 311 -------~~~~~~~GT~~y~APEv~~~~~y~~~---~DiWSlGvily 347 (573)
T 3uto_A 311 -------QSVKVTTGTAEFAAPEVAEGKPVGYY---TDMWSVGVLSY 347 (573)
T ss_dssp -------SEEEEECSSGGGCCHHHHTTCCBCHH---HHHHHHHHHHH
T ss_pred -------CceeeeEECccccCHHHhCCCCCCcH---HHHHHHHHHHH
Confidence 22345789999999999999887655 99999999999
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-36 Score=334.65 Aligned_cols=334 Identities=18% Similarity=0.170 Sum_probs=277.8
Q ss_pred CCCcccccCccccccccccEEecccCcCcccC-chhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEI-PHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRD 81 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 81 (746)
+|++...++..+..+++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+.+.
T Consensus 39 ~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 118 (455)
T 3v47_A 39 LNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGA 118 (455)
T ss_dssp SSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTH
T ss_pred CCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCcc
Confidence 45566666667778999999999999997555 67899999999999999999988899999999999999999999887
Q ss_pred cchh--hcCCCCCCEEEccCCCCc----Cc-ccCCCCCCEEeccCCCcccc-----cCC--CCCcEeeCccCcccccCCc
Q 041467 82 ILTE--ICSLFKLERLRIDCGGRI----DS-LGHLKSLLLLSLAFNQFLSL-----SNA--SSLEMIEFSRNQFSGGVSV 147 (746)
Q Consensus 82 ~~~~--~~~l~~L~~L~l~~~~~~----~~-~~~l~~L~~L~Ls~N~l~~l-----~~l--~~L~~L~Ls~N~l~~~~~~ 147 (746)
.+.. +.++++|++|++++|... .. +.++++|++|+|++|++..+ ..+ .+|+.|++++|.+.+..+.
T Consensus 119 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~ 198 (455)
T 3v47_A 119 VLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEY 198 (455)
T ss_dssp HHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTT
T ss_pred ccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchh
Confidence 6665 999999999999986543 22 88999999999999999543 223 6899999999999976655
Q ss_pred cc--------cCCCCCCEEEccCCCCCCCCCCCccccccccC---CCCCCEEEccccccccc----------CChhhhhc
Q 041467 148 DF--------SRLKNLSWLNLGVNNLGSGTANELDFINLLTN---CSKLERLYFNRNGFEGV----------LPHSIANL 206 (746)
Q Consensus 148 ~~--------~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~---l~~L~~L~Ls~N~l~~~----------~p~~~~~l 206 (746)
.+ ..+++|++|+|++|.+++ ..+..+.. .++|+.|++++|.+.+. .+..+..+
T Consensus 199 ~~~~~~~~~~~~~~~L~~L~Ls~n~l~~------~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (455)
T 3v47_A 199 WLGWEKCGNPFKNTSITTLDLSGNGFKE------SMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGL 272 (455)
T ss_dssp CTTHHHHCCTTTTCEEEEEECTTSCCCH------HHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGG
T ss_pred hccccccccccccceeeeEecCCCcccc------cchhhhhccccccceeeEeeccccccccccchhhhccCcccccccc
Confidence 43 367899999999999976 44444433 37899999998865432 12222222
Q ss_pred c-cccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccc---cChH
Q 041467 207 S-STIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGN---LTLQ 282 (746)
Q Consensus 207 ~-~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~---l~~l 282 (746)
. ..|+.|++++|++++..|..|+++++|++|+|++|++.+..|..|.++++|++|+|++|.+++..+..+.. |+.|
T Consensus 273 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 352 (455)
T 3v47_A 273 EASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVL 352 (455)
T ss_dssp TTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEE
T ss_pred cccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEE
Confidence 1 36999999999999989999999999999999999999988999999999999999999998877766554 5555
Q ss_pred HhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCc
Q 041467 283 TYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLP 343 (746)
Q Consensus 283 ~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p 343 (746)
++.+|++.+..|..|..+++|++|+|++|+|++..+..+..+++| ++|++++|++++..|
T Consensus 353 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 353 DLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSL-QKIWLHTNPWDCSCP 412 (455)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC-CEEECCSSCBCCCTT
T ss_pred ECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcc-cEEEccCCCcccCCC
Confidence 666899998889999999999999999999996555566888999 689999999998877
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-35 Score=340.26 Aligned_cols=383 Identities=19% Similarity=0.182 Sum_probs=278.9
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
+.+++|||++|+|++..|.+|.++++|++|||++|+|+++.|++|.++++|++|+|++|++.+..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47899999999999777789999999999999999999877888999999999999999998777788999999999999
Q ss_pred cCCCCc----CcccCCCCCCEEeccCCCccc------ccCCCCCcEeeCccCcccccCCccccCCCCCC----EEEccCC
Q 041467 98 DCGGRI----DSLGHLKSLLLLSLAFNQFLS------LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLS----WLNLGVN 163 (746)
Q Consensus 98 ~~~~~~----~~~~~l~~L~~L~Ls~N~l~~------l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~Ls~N 163 (746)
+.|... ..|+++++|+.|+|++|++.. +.++++|+.|+|++|+|++..+..|..+.+++ .++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 986533 468999999999999999843 46789999999999999998888877655443 5667766
Q ss_pred CCCCCCCCCccc--------------------------------------------------------------------
Q 041467 164 NLGSGTANELDF-------------------------------------------------------------------- 175 (746)
Q Consensus 164 ~l~~~~~~~~~~-------------------------------------------------------------------- 175 (746)
.++...+..+..
T Consensus 212 ~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~ 291 (635)
T 4g8a_A 212 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 291 (635)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECC
T ss_pred cccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhh
Confidence 664332211000
Q ss_pred -----------------------------cccccCCCCCCEEEcccccccccCChhh-------------------hhcc
Q 041467 176 -----------------------------INLLTNCSKLERLYFNRNGFEGVLPHSI-------------------ANLS 207 (746)
Q Consensus 176 -----------------------------~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-------------------~~l~ 207 (746)
...+....+|+.|++++|.+.+..+..+ ..++
T Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~ 371 (635)
T 4g8a_A 292 DYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 371 (635)
T ss_dssp CSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCT
T ss_pred cccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccccc
Confidence 0001122345555555555443222111 1222
Q ss_pred cccceEEcccCccc--ccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccccc----ccccccCh
Q 041467 208 STIKQIAMGSNRIS--STIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSIL----SSLGNLTL 281 (746)
Q Consensus 208 ~~L~~L~l~~N~i~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~----~~l~~l~~ 281 (746)
+|+.|++++|.+. +..+..+..+.+|+.|+++.|.... .+..+..+++|+.++++.|......+ ..+.++..
T Consensus 372 -~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~ 449 (635)
T 4g8a_A 372 -SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 449 (635)
T ss_dssp -TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCE
T ss_pred -ccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccc
Confidence 4555555555553 2234444455555566655555543 34556677778888887776654432 23344455
Q ss_pred HHhhhccCCCCCCccccCCCCCCeeeecCCcCc-cccchhhhhcccccceEEccCccccccCchhhhcccCCceeecC--
Q 041467 282 QTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT-STLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIP-- 358 (746)
Q Consensus 282 l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp-- 358 (746)
++...|++.+..|..+..+++|+.|+|++|++. +.+|..+..+++| ++|+|++|++++..|..|+++++|+.|++.
T Consensus 450 l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L-~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N 528 (635)
T 4g8a_A 450 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL-TFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 528 (635)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC-CEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred ccccccccccccccccccchhhhhhhhhhcccccccCchhhhhcccc-CEEECCCCccCCcChHHHcCCCCCCEEECCCC
Confidence 555678888888888888999999999998754 4567778888888 689999999998888889999999988653
Q ss_pred -------CCCCCCCCCCEEEccCCcCcccCCCCC-cc-CCCCeeeEecCCCcCC
Q 041467 359 -------EYPENLSFFELLNLSYNYFGSEVPTKG-VF-NNKTRFSIIGNGKLCG 403 (746)
Q Consensus 359 -------~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~-~~~~~~~~~~n~~l~~ 403 (746)
..+..+++|+.|||++|+|++.+|... .+ .++..+++.+||+.|.
T Consensus 529 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 529 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred cCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 345678999999999999999888542 23 5688899999998884
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=330.99 Aligned_cols=75 Identities=20% Similarity=0.190 Sum_probs=38.1
Q ss_pred cEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEcc
Q 041467 21 RYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID 98 (746)
Q Consensus 21 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 98 (746)
+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|.+.+..|..|.++++|++|+|+
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 88 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 88 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECC
Confidence 45555555554 4444332 355555555555555445555555555555555555544444444444444444443
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=324.66 Aligned_cols=307 Identities=21% Similarity=0.191 Sum_probs=243.8
Q ss_pred CCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 4 n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
+++..+|... .+.|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+.+..+
T Consensus 21 ~~l~~ip~~~---~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 97 (477)
T 2id5_A 21 KRFVAVPEGI---PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPL 97 (477)
T ss_dssp CCCSSCCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCT
T ss_pred CCcCcCCCCC---CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCc
Confidence 4455555433 3579999999999998888999999999999999999998889999999999999999999977666
Q ss_pred hhhcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCC
Q 041467 84 TEICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKN 154 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 154 (746)
..|.++++|++|+++.|... ..|.++++|+.|+|++|++. .|.++++|+.|+|++|++++..+..|..+++
T Consensus 98 ~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 177 (477)
T 2id5_A 98 GVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHG 177 (477)
T ss_dssp TSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTT
T ss_pred ccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCC
Confidence 67888899999998876543 46778888888888888874 4567788888888888888777777888888
Q ss_pred CCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCC
Q 041467 155 LSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNL 234 (746)
Q Consensus 155 L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L 234 (746)
|+.|+|++|.+.+. .+..|..+++|+.|++++|.+.+.+|....... +|+.|++++|++++..+..|.++++|
T Consensus 178 L~~L~l~~n~i~~~------~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 178 LIVLRLRHLNINAI------RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp CCEEEEESCCCCEE------CTTCSCSCTTCCEEEEECCTTCCEECTTTTTTC-CCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred CcEEeCCCCcCcEe------ChhhcccCcccceeeCCCCccccccCcccccCc-cccEEECcCCcccccCHHHhcCcccc
Confidence 88888888888762 334577788888888888877777777666665 68888888888885444577888888
Q ss_pred CeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCc
Q 041467 235 NWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT 314 (746)
Q Consensus 235 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 314 (746)
+.|+|++|.+.+..+..|..+++|+.|+|++|++++ ..|..|.++++|+.|+|++|+|+
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---------------------~~~~~~~~l~~L~~L~L~~N~l~ 309 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAV---------------------VEPYAFRGLNYLRVLNVSGNQLT 309 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSE---------------------ECTTTBTTCTTCCEEECCSSCCS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccce---------------------ECHHHhcCcccCCEEECCCCcCc
Confidence 888888888887777778888888888888887763 34556777888888888888888
Q ss_pred cccchhhhhcccccceEEccCccccccC
Q 041467 315 STLPQQILSVTTLSLYLELDNNLLNGSL 342 (746)
Q Consensus 315 ~~~p~~~~~l~~l~~~L~Ls~N~l~~~~ 342 (746)
+..+..+..+.+| +.|+|++|++....
T Consensus 310 ~~~~~~~~~l~~L-~~L~l~~N~l~c~c 336 (477)
T 2id5_A 310 TLEESVFHSVGNL-ETLILDSNPLACDC 336 (477)
T ss_dssp CCCGGGBSCGGGC-CEEECCSSCEECSG
T ss_pred eeCHhHcCCCccc-CEEEccCCCccCcc
Confidence 6555556677777 57888888887543
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-35 Score=323.26 Aligned_cols=273 Identities=21% Similarity=0.227 Sum_probs=184.9
Q ss_pred ccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCC-------------CeeeCcCCCC
Q 041467 12 PLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNL-------------IKLSTDSNNL 78 (746)
Q Consensus 12 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------------~~L~L~~N~l 78 (746)
|.-...++|++|++++|.+ +.+|++|+++++|++|+|++|.++|.+|.+++++.+| ++|++++|.+
T Consensus 5 p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l 83 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGL 83 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCC
T ss_pred ccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcc
Confidence 4444568899999999999 7999999999999999999999999999999998875 9999999988
Q ss_pred CCccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcccccCC-CCCcEeeCccCcccccCCccccCCCCCCE
Q 041467 79 VRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNA-SSLEMIEFSRNQFSGGVSVDFSRLKNLSW 157 (746)
Q Consensus 79 ~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 157 (746)
.+ +|.. .++|+.|+++++.....-..+++|+.|++++|++..++.. ++|++|++++|++++ +| .|+.+++|++
T Consensus 84 ~~-lp~~---~~~L~~L~l~~n~l~~lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~ 157 (454)
T 1jl5_A 84 SS-LPEL---PPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKI 157 (454)
T ss_dssp SC-CCSC---CTTCSEEECCSSCCSSCCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCE
T ss_pred cc-CCCC---cCCCCEEEccCCcCCccccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCE
Confidence 65 4442 3689999998865443223357899999999999888766 589999999999987 56 5999999999
Q ss_pred EEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCee
Q 041467 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWL 237 (746)
Q Consensus 158 L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L 237 (746)
|++++|++++.+ .. ..+|++|++++|++++ +| .+..++ +|+.|++++|++++ +|... .+|++|
T Consensus 158 L~l~~N~l~~lp-------~~---~~~L~~L~L~~n~l~~-l~-~~~~l~-~L~~L~l~~N~l~~-l~~~~---~~L~~L 220 (454)
T 1jl5_A 158 IDVDNNSLKKLP-------DL---PPSLEFIAAGNNQLEE-LP-ELQNLP-FLTAIYADNNSLKK-LPDLP---LSLESI 220 (454)
T ss_dssp EECCSSCCSCCC-------CC---CTTCCEEECCSSCCSS-CC-CCTTCT-TCCEEECCSSCCSS-CCCCC---TTCCEE
T ss_pred EECCCCcCcccC-------CC---cccccEEECcCCcCCc-Cc-cccCCC-CCCEEECCCCcCCc-CCCCc---CcccEE
Confidence 999999988632 21 2478888888888875 56 477776 68888888888875 55433 477888
Q ss_pred ecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCcc
Q 041467 238 TMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTS 315 (746)
Q Consensus 238 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 315 (746)
++++|++. .+|. ++.+++|++|++++|++++ +|..+.+++.+++.+|.+.+ +|.. +++|+.|++++|++++
T Consensus 221 ~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 221 VAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG 291 (454)
T ss_dssp ECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE
T ss_pred ECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc
Confidence 88888777 5663 7778888888888888875 44455667777777777775 4443 3667777777777775
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-35 Score=333.44 Aligned_cols=352 Identities=17% Similarity=0.188 Sum_probs=260.1
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCC-c
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVR-D 81 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~ 81 (746)
+|++...++..+..+++|++|+|++|+|++..|++|.++++|++|||++|+|+ .+|.. .+++|++|+|++|.+.+ .
T Consensus 61 ~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~ 137 (562)
T 3a79_B 61 QNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLP 137 (562)
T ss_dssp SSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCC
T ss_pred CCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccC
Confidence 45666666667788999999999999999888999999999999999999999 57776 89999999999999977 4
Q ss_pred cchhhcCCCCCCEEEccCCCCc-CcccCCCCC--CEEeccCCCc--c-----ccc-------------------------
Q 041467 82 ILTEICSLFKLERLRIDCGGRI-DSLGHLKSL--LLLSLAFNQF--L-----SLS------------------------- 126 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~~-~~~~~l~~L--~~L~Ls~N~l--~-----~l~------------------------- 126 (746)
+|..|+++++|++|+++.+... ..+..+++| +.|+|++|++ . .+.
T Consensus 138 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~ 217 (562)
T 3a79_B 138 VCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSV 217 (562)
T ss_dssp CCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEE
T ss_pred chHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcc
Confidence 5689999999999999987654 456666666 8999988877 1 121
Q ss_pred -CCC-------------------------------------------------------CCcEeeCccCcccccCCccc-
Q 041467 127 -NAS-------------------------------------------------------SLEMIEFSRNQFSGGVSVDF- 149 (746)
Q Consensus 127 -~l~-------------------------------------------------------~L~~L~Ls~N~l~~~~~~~~- 149 (746)
+++ +|++|++++|+++|.+|..+
T Consensus 218 ~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~ 297 (562)
T 3a79_B 218 NALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEF 297 (562)
T ss_dssp SSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCC
T ss_pred cccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhh
Confidence 122 34444444444444444443
Q ss_pred ----cCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCC
Q 041467 150 ----SRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIP 225 (746)
Q Consensus 150 ----~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p 225 (746)
..++.|+.++++.|.+ ..+. .....+....+|+.|++++|.+..... ...++ +|++|++++|++++.+|
T Consensus 298 ~~~~~~L~~L~~~~~~~~~~-~~p~---~~~~~~~~~~~L~~L~l~~n~~~~~~~--~~~l~-~L~~L~l~~n~l~~~~~ 370 (562)
T 3a79_B 298 TYSETALKSLMIEHVKNQVF-LFSK---EALYSVFAEMNIKMLSISDTPFIHMVC--PPSPS-SFTFLNFTQNVFTDSVF 370 (562)
T ss_dssp CCCSCSCCEEEEEEEEECCC-SSCH---HHHHHHHHTCCCSEEEEESSCCCCCCC--CSSCC-CCCEEECCSSCCCTTTT
T ss_pred hcccccchheehhhccccee-ecCh---hhhhhhhccCcceEEEccCCCcccccC--ccCCC-CceEEECCCCccccchh
Confidence 3333333333333333 1000 000001112568899999998763221 13454 68999999999998888
Q ss_pred ccccCCCCCCeeeccccccee--cCCcCCCCCCCCceeecccccccccccc----cccccChHHhhhccCCCCCCccccC
Q 041467 226 HGIRNLVNLNWLTMESSQLIG--TIPPLIGETPNLQLLNIGGNHLQGSILS----SLGNLTLQTYLFNNLQGNIPSSLAN 299 (746)
Q Consensus 226 ~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~----~l~~l~~l~~l~n~l~~~~p~~~~~ 299 (746)
..|+++++|++|+|++|++.+ .+|..++.+++|++|++++|++++.+|. .+.+|+.+++.+|++++.+|..+.
T Consensus 371 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~- 449 (562)
T 3a79_B 371 QGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP- 449 (562)
T ss_dssp TTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC-
T ss_pred hhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc-
Confidence 889999999999999999886 3356788899999999999999874443 234566666668888877776655
Q ss_pred CCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcc
Q 041467 300 CKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGS 379 (746)
Q Consensus 300 l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~ 379 (746)
++|++|+|++|+|+ .+|..++.++.| +.|+|++|+++ .+|... +..++.|+.|++++|.+.+
T Consensus 450 -~~L~~L~L~~N~l~-~ip~~~~~l~~L-~~L~L~~N~l~-~l~~~~--------------~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 450 -PKVKVLDLHNNRIM-SIPKDVTHLQAL-QELNVASNQLK-SVPDGV--------------FDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp -TTCSEEECCSSCCC-CCCTTTTSSCCC-SEEECCSSCCC-CCCTTS--------------TTTCTTCCCEECCSCCBCC
T ss_pred -CcCCEEECCCCcCc-ccChhhcCCCCC-CEEECCCCCCC-CCCHHH--------------HhcCCCCCEEEecCCCcCC
Confidence 78999999999998 799988999999 68999999998 566551 3456677889999999998
Q ss_pred cCCC
Q 041467 380 EVPT 383 (746)
Q Consensus 380 ~~p~ 383 (746)
..|.
T Consensus 512 ~c~~ 515 (562)
T 3a79_B 512 TCPG 515 (562)
T ss_dssp CHHH
T ss_pred Ccch
Confidence 7774
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=317.16 Aligned_cols=331 Identities=18% Similarity=0.179 Sum_probs=237.2
Q ss_pred cccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 15 ILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
..+++|++|+|++|.+++ +| .|+.+++|++|+|++|+|++ +| ++.+++|++|++++|.+.+. + ++++++|++
T Consensus 39 ~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~ 110 (457)
T 3bz5_A 39 EQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTY 110 (457)
T ss_dssp HHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCE
T ss_pred hHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCCCcCCE
Confidence 447899999999999985 46 69999999999999999996 45 89999999999999999774 3 889999999
Q ss_pred EEccCCCCc-CcccCCCCCCEEeccCCCccc--ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCC
Q 041467 95 LRIDCGGRI-DSLGHLKSLLLLSLAFNQFLS--LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171 (746)
Q Consensus 95 L~l~~~~~~-~~~~~l~~L~~L~Ls~N~l~~--l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 171 (746)
|++++|... -.++++++|+.|++++|++.. +.++++|++|++++|+..+.+ .++.+++|++|++++|++++.
T Consensus 111 L~L~~N~l~~l~~~~l~~L~~L~l~~N~l~~l~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l--- 185 (457)
T 3bz5_A 111 LNCDTNKLTKLDVSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL--- 185 (457)
T ss_dssp EECCSSCCSCCCCTTCTTCCEEECTTSCCSCCCCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC---
T ss_pred EECCCCcCCeecCCCCCcCCEEECCCCccceeccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee---
Confidence 999886543 237889999999999999965 567889999999999655555 478899999999999999862
Q ss_pred CccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcC
Q 041467 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPL 251 (746)
Q Consensus 172 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 251 (746)
+ +..+++|+.|++++|++++. .+..++ +|+.|++++|++++ +| ++.+++|++|++++|++.+..+..
T Consensus 186 ----~--l~~l~~L~~L~l~~N~l~~~---~l~~l~-~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~ 252 (457)
T 3bz5_A 186 ----D--VSQNKLLNRLNCDTNNITKL---DLNQNI-QLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVST 252 (457)
T ss_dssp ----C--CTTCTTCCEEECCSSCCSCC---CCTTCT-TCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTT
T ss_pred ----c--cccCCCCCEEECcCCcCCee---ccccCC-CCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHH
Confidence 2 67788999999999999864 367776 79999999999997 66 888999999999999998765544
Q ss_pred CCCCC-------CCceeeccccccccccc-ccccccChHHhhhccCCCCCCc--------cccCCCCCCeeeecCCcCcc
Q 041467 252 IGETP-------NLQLLNIGGNHLQGSIL-SSLGNLTLQTYLFNNLQGNIPS--------SLANCKSLLGLSVSHNKLTS 315 (746)
Q Consensus 252 ~~~l~-------~L~~L~Ls~N~l~~~~~-~~l~~l~~l~~l~n~l~~~~p~--------~~~~l~~L~~L~Ls~N~l~~ 315 (746)
+.++. +|+.|++++|.+.+.+| ..+.+|+.+++.+|...+.+|. .++++++|+.|++++|+|++
T Consensus 253 l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~ 332 (457)
T 3bz5_A 253 LSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTE 332 (457)
T ss_dssp CTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSC
T ss_pred CCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccc
Confidence 44433 44555555555544443 2234455555555555554443 24445566666666666665
Q ss_pred ccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCC----CCCCCCCCEEEccCCcCcccCCC
Q 041467 316 TLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEY----PENLSFFELLNLSYNYFGSEVPT 383 (746)
Q Consensus 316 ~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~----~~~l~~L~~L~ls~N~l~~~~p~ 383 (746)
+| +..++.| +.|++++|++++ +| .|..|.+... ...+..++.+++++|+++|.+|.
T Consensus 333 -l~--l~~l~~L-~~L~l~~N~l~~-l~-------~L~~L~l~~n~l~g~~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 333 -LD--VSHNTKL-KSLSCVNAHIQD-FS-------SVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp -CC--CTTCTTC-SEEECCSSCCCB-CT-------TGGGSSGGGTSEEEEEEEEECCCBCCBTTBEEEECCT
T ss_pred -cc--cccCCcC-cEEECCCCCCCC-cc-------ccccccccCCcEEecceeeecCccccccCcEEEEcCh
Confidence 33 5666666 456666666664 21 1111111000 01233455666777777776664
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=319.10 Aligned_cols=178 Identities=20% Similarity=0.286 Sum_probs=156.1
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+++.+|+++++.++||||+++++++...+..++
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 3467899999999999999996 9999986542 3445678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+|+.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 167 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG- 167 (328)
T ss_dssp EECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred EEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence 99999999985 46799999999999999999999999 9999999999999999999999999999875321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||++|+|||++.+..++ ++++||||+||++|
T Consensus 168 --------~~~~~~~gt~~y~aPE~~~~~~~~--~~~~DiwslG~il~ 205 (328)
T 3fe3_A 168 --------GKLDAFCGAPPYAAPELFQGKKYD--GPEVDVWSLGVILY 205 (328)
T ss_dssp --------CGGGTTSSSGGGCCHHHHHTCCCC--SHHHHHHHHHHHHH
T ss_pred --------CccccccCCcceeCcccccCCCcC--CchhhhhhhHHHHH
Confidence 123347899999999999988764 23699999999998
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=315.07 Aligned_cols=336 Identities=22% Similarity=0.303 Sum_probs=252.8
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
+++|+.|++++|.+. .+|. +..+++|++|+|++|.+++. |. +.++++|++|++++|.+.+..+ +.++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 578899999999987 4664 88899999999999999864 44 8899999999999998876554 88999999999
Q ss_pred ccCCCCc--CcccCCCCCCEEeccCCCcc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCC
Q 041467 97 IDCGGRI--DSLGHLKSLLLLSLAFNQFL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171 (746)
Q Consensus 97 l~~~~~~--~~~~~l~~L~~L~Ls~N~l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 171 (746)
++++... ..+.++++|+.|++++|.+. .+..+++|+.|+++ |.+.+.. .+..+++|++|++++|.++..
T Consensus 119 L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--- 192 (466)
T 1o6v_A 119 LFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--- 192 (466)
T ss_dssp CCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC---
T ss_pred CCCCCCCCChHHcCCCCCCEEECCCCccCCChhhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC---
Confidence 9886543 44888999999999999884 45678899999986 5565443 388899999999999988752
Q ss_pred CccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcC
Q 041467 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPL 251 (746)
Q Consensus 172 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 251 (746)
..+..+++|++|++++|.+++..| ++.++ +|+.|++++|++++ + +.+..+++|++|++++|.+.+..|
T Consensus 193 -----~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~-~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~-- 260 (466)
T 1o6v_A 193 -----SVLAKLTNLESLIATNNQISDITP--LGILT-NLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP-- 260 (466)
T ss_dssp -----GGGGGCTTCSEEECCSSCCCCCGG--GGGCT-TCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred -----hhhccCCCCCEEEecCCccccccc--ccccC-CCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--
Confidence 237788899999999999886555 66666 79999999999885 3 468888999999999999886654
Q ss_pred CCCCCCCceeeccccccccccc-ccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccce
Q 041467 252 IGETPNLQLLNIGGNHLQGSIL-SSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLY 330 (746)
Q Consensus 252 ~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~ 330 (746)
+..+++|+.|++++|.+++..+ ..+.+|+.|++.+|++.+..| ++.+++|+.|++++|++++..| +..+++| +.
T Consensus 261 ~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L-~~ 335 (466)
T 1o6v_A 261 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKL-QR 335 (466)
T ss_dssp GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTC-CE
T ss_pred hhcCCCCCEEECCCCccCccccccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccC-CE
Confidence 7888999999999998886543 234445555556777776544 7778888888888888876544 6677777 57
Q ss_pred EEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCC
Q 041467 331 LELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNG 399 (746)
Q Consensus 331 L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 399 (746)
|++++|.+++. ..+. .++.|+.|++++|++++.+| ...+..+..+.+.+|+
T Consensus 336 L~l~~n~l~~~--~~l~---------------~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~ 386 (466)
T 1o6v_A 336 LFFYNNKVSDV--SSLA---------------NLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQA 386 (466)
T ss_dssp EECCSSCCCCC--GGGT---------------TCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEE
T ss_pred eECCCCccCCc--hhhc---------------cCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCc
Confidence 88888888753 2344 34555666666666666655 3344555555555543
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=327.44 Aligned_cols=376 Identities=21% Similarity=0.160 Sum_probs=287.5
Q ss_pred CCCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCc
Q 041467 2 SSNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRD 81 (746)
Q Consensus 2 ~~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 81 (746)
++|++..+++..+..+++|++|||++|+|+++.|.+|.++++|++|+|++|+|++..|..|.++++|++|+|++|++.+.
T Consensus 60 s~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l 139 (635)
T 4g8a_A 60 SFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASL 139 (635)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCS
T ss_pred eCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCC
Confidence 35667777777888899999999999999988888999999999999999999987778899999999999999999887
Q ss_pred cchhhcCCCCCCEEEccCCCC-----cCcccCCCCCCEEeccCCCcccc-----cCCC----CCcEeeCccCcccccCCc
Q 041467 82 ILTEICSLFKLERLRIDCGGR-----IDSLGHLKSLLLLSLAFNQFLSL-----SNAS----SLEMIEFSRNQFSGGVSV 147 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~-----~~~~~~l~~L~~L~Ls~N~l~~l-----~~l~----~L~~L~Ls~N~l~~~~~~ 147 (746)
.+..|+++++|++|+++.|.. +..++.+++|+.|+|++|++..+ ..+. .+..++++.|.++...+.
T Consensus 140 ~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~ 219 (635)
T 4g8a_A 140 ENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPG 219 (635)
T ss_dssp TTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTT
T ss_pred ChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcc
Confidence 777899999999999998653 35678899999999999998432 1111 122344444433321111
Q ss_pred --------------------------------------------------------------------------------
Q 041467 148 -------------------------------------------------------------------------------- 147 (746)
Q Consensus 148 -------------------------------------------------------------------------------- 147 (746)
T Consensus 220 ~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~ 299 (635)
T 4g8a_A 220 AFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGII 299 (635)
T ss_dssp TTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECT
T ss_pred cccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchh
Confidence
Q ss_pred -----------------------cccCCCCCCEEEccCCCCCCCCCCCcc-------------ccccccCCCCCCEEEcc
Q 041467 148 -----------------------DFSRLKNLSWLNLGVNNLGSGTANELD-------------FINLLTNCSKLERLYFN 191 (746)
Q Consensus 148 -----------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~-------------~~~~~~~l~~L~~L~Ls 191 (746)
.+....+|+.|++++|.+.......+. .+.....+++|+.|+++
T Consensus 300 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls 379 (635)
T 4g8a_A 300 DLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLS 379 (635)
T ss_dssp TTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECC
T ss_pred hhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhh
Confidence 122334566677777666543322110 11123467899999999
Q ss_pred ccccc--ccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCC-cCCCCCCCCceeecccccc
Q 041467 192 RNGFE--GVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIP-PLIGETPNLQLLNIGGNHL 268 (746)
Q Consensus 192 ~N~l~--~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l 268 (746)
+|.+. +..+..+..+. +|+.+++..|.+.. .+..+..+++|+.++++.|+.....+ ..|..+++++.++++.|.+
T Consensus 380 ~n~l~~~~~~~~~~~~~~-~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l 457 (635)
T 4g8a_A 380 RNGLSFKGCCSQSDFGTI-SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 457 (635)
T ss_dssp SSCCBEEEECCHHHHSCS-CCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCC
T ss_pred ccccccccccccchhhhh-hhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccccccccccc
Confidence 99885 34567777776 69999999998874 56678889999999998888776554 4578888999999999998
Q ss_pred cccccccccc---cChHHhhhcc-CCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCch
Q 041467 269 QGSILSSLGN---LTLQTYLFNN-LQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPP 344 (746)
Q Consensus 269 ~~~~~~~l~~---l~~l~~l~n~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~ 344 (746)
.+..+..+.. ++.+++.+|+ ..+.+|..|..+++|++|+|++|+|++..|..+..+++| +.|+|++|+|++..|.
T Consensus 458 ~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L-~~L~Ls~N~l~~l~~~ 536 (635)
T 4g8a_A 458 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL-QVLNMSHNNFFSLDTF 536 (635)
T ss_dssp EECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC-CEEECTTSCCCBCCCG
T ss_pred ccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCC-CEEECCCCcCCCCChh
Confidence 8777665544 4445555665 444578888999999999999999998788888888888 6899999999888888
Q ss_pred hhhcccCCceeec---------CCCCCCC-CCCCEEEccCCcCccc
Q 041467 345 EVGNLKNLLRLHI---------PEYPENL-SFFELLNLSYNYFGSE 380 (746)
Q Consensus 345 ~~~~l~~L~~L~l---------p~~~~~l-~~L~~L~ls~N~l~~~ 380 (746)
.|.++++|+.|++ |..+..+ ++|+.|+|++|.++..
T Consensus 537 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 537 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp GGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred HHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 8889999998865 4455566 6899999999999764
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-34 Score=328.59 Aligned_cols=335 Identities=17% Similarity=0.135 Sum_probs=266.2
Q ss_pred ccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEE
Q 041467 16 LRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERL 95 (746)
Q Consensus 16 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 95 (746)
.+++++.|++++|.+....+..|.++++|++|+|++|.|++..|..|+.+++|++|+|++|.+.+..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 35789999999999986666778999999999999999998888899999999999999999988888888999999999
Q ss_pred EccCCCCc----CcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCC
Q 041467 96 RIDCGGRI----DSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLG 166 (746)
Q Consensus 96 ~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 166 (746)
+|++|... ..|+++++|+.|+|++|.+. .|.++++|+.|+|++|.+++.. ++.+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99886533 33688889999999999884 3567888999999999888653 556788889999988886
Q ss_pred CCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccccccee
Q 041467 167 SGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246 (746)
Q Consensus 167 ~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~ 246 (746)
+ +...++|+.|++++|.++.. |..+ ..+|+.|++++|.+++ +.++..+++|+.|+|++|.+.+
T Consensus 206 ~-----------l~~~~~L~~L~ls~n~l~~~-~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~ 268 (597)
T 3oja_B 206 T-----------LAIPIAVEELDASHNSINVV-RGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEK 268 (597)
T ss_dssp E-----------EECCTTCSEEECCSSCCCEE-ECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCE
T ss_pred c-----------ccCCchhheeeccCCccccc-cccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCC
Confidence 5 33456788999999988743 3322 1368889999998886 4678888999999999999988
Q ss_pred cCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhccc
Q 041467 247 TIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTT 326 (746)
Q Consensus 247 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 326 (746)
..|..|+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..++.
T Consensus 269 ~~~~~~~~l~~L~~L~Ls~N~l~~----------------------l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~ 325 (597)
T 3oja_B 269 IMYHPFVKMQRLERLYISNNRLVA----------------------LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDR 325 (597)
T ss_dssp EESGGGTTCSSCCEEECTTSCCCE----------------------EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTT
T ss_pred CCHHHhcCccCCCEEECCCCCCCC----------------------CCcccccCCCCcEEECCCCCCC-ccCcccccCCC
Confidence 888888889999999999888873 3445567889999999999998 68999999999
Q ss_pred ccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCCcCCCCC
Q 041467 327 LSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLD 406 (746)
Q Consensus 327 l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~~~ 406 (746)
| .+|+|++|.+++ +| +..++.|+.|++++|.+++..+. ..+.......+.++...|+...
T Consensus 326 L-~~L~L~~N~l~~-~~-----------------~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~~ 385 (597)
T 3oja_B 326 L-ENLYLDHNSIVT-LK-----------------LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDY 385 (597)
T ss_dssp C-SEEECCSSCCCC-CC-----------------CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTTC
T ss_pred C-CEEECCCCCCCC-cC-----------------hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcch
Confidence 9 689999999974 22 23567889999999999876432 2233444444567777887644
Q ss_pred CCCCCcc
Q 041467 407 ELHLPSC 413 (746)
Q Consensus 407 ~~~~~~~ 413 (746)
......|
T Consensus 386 ~~~~~~c 392 (597)
T 3oja_B 386 QLEHGLC 392 (597)
T ss_dssp EEETTEE
T ss_pred hccCCcc
Confidence 3333333
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=310.38 Aligned_cols=325 Identities=18% Similarity=0.143 Sum_probs=257.5
Q ss_pred ccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEE
Q 041467 16 LRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERL 95 (746)
Q Consensus 16 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 95 (746)
.++++++|++++|.++...+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|.+.+..|..+.++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 36889999999999985555568999999999999999998777899999999999999999988888889999999999
Q ss_pred EccCCCCc----CcccCCCCCCEEeccCCCccc-----ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCC
Q 041467 96 RIDCGGRI----DSLGHLKSLLLLSLAFNQFLS-----LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLG 166 (746)
Q Consensus 96 ~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 166 (746)
+++++... ..|.++++|++|+|++|++.. +.++++|+.|++++|++++. .+..+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 99886543 236788899999999998843 56788899999999988864 3566788899999988886
Q ss_pred CCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccccccee
Q 041467 167 SGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246 (746)
Q Consensus 167 ~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~ 246 (746)
+ +...++|+.|++++|.++.. |... . .+|+.|++++|++++. ..+.++++|++|+|++|.+.+
T Consensus 200 ~-----------~~~~~~L~~L~l~~n~l~~~-~~~~--~-~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~ 262 (390)
T 3o6n_A 200 T-----------LAIPIAVEELDASHNSINVV-RGPV--N-VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEK 262 (390)
T ss_dssp E-----------EECCSSCSEEECCSSCCCEE-ECCC--C-SSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCE
T ss_pred c-----------cCCCCcceEEECCCCeeeec-cccc--c-ccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCC
Confidence 5 33446789999999988744 4332 2 3688999999998863 578888999999999999988
Q ss_pred cCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhccc
Q 041467 247 TIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTT 326 (746)
Q Consensus 247 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 326 (746)
..|..|..+++|+.|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..++.
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~----------------------~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~ 319 (390)
T 3o6n_A 263 IMYHPFVKMQRLERLYISNNRLVA----------------------LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDR 319 (390)
T ss_dssp EESGGGTTCSSCCEEECCSSCCCE----------------------EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTT
T ss_pred cChhHccccccCCEEECCCCcCcc----------------------cCcccCCCCCCCEEECCCCcce-ecCccccccCc
Confidence 888888889999999999988873 3444567889999999999998 68888999999
Q ss_pred ccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCCcCC
Q 041467 327 LSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCG 403 (746)
Q Consensus 327 l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~ 403 (746)
| +.|++++|++++ +| +..++.|+.|++++|+++..... ..+.......+.++...|+
T Consensus 320 L-~~L~L~~N~i~~-~~-----------------~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~ 376 (390)
T 3o6n_A 320 L-ENLYLDHNSIVT-LK-----------------LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCK 376 (390)
T ss_dssp C-SEEECCSSCCCC-CC-----------------CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCC
T ss_pred C-CEEECCCCccce-eC-----------------chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceec
Confidence 9 689999999973 32 23567789999999999874321 1233333333445555554
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=313.37 Aligned_cols=321 Identities=26% Similarity=0.340 Sum_probs=272.0
Q ss_pred ccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCC
Q 041467 14 CILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLE 93 (746)
Q Consensus 14 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 93 (746)
+..+++|++|+|++|.+++. |. +.++++|++|+|++|.+++..| ++++++|++|++++|.+.+..+ +.++++|+
T Consensus 64 ~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 137 (466)
T 1o6v_A 64 VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLN 137 (466)
T ss_dssp GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCS
T ss_pred hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCC
Confidence 55689999999999999854 44 9999999999999999996544 9999999999999999976543 89999999
Q ss_pred EEEccCCCC--cCcccCCCCCCEEeccCCCc---ccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCC
Q 041467 94 RLRIDCGGR--IDSLGHLKSLLLLSLAFNQF---LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSG 168 (746)
Q Consensus 94 ~L~l~~~~~--~~~~~~l~~L~~L~Ls~N~l---~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 168 (746)
+|+++.+.. +..++++++|+.|+++ |.+ ..+.++++|+.|++++|++++. ..+..+++|++|++++|.+++.
T Consensus 138 ~L~l~~n~l~~~~~~~~l~~L~~L~l~-~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 214 (466)
T 1o6v_A 138 RLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDI 214 (466)
T ss_dssp EEEEEEEEECCCGGGTTCTTCSEEEEE-ESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred EEECCCCccCCChhhccCCcccEeecC-CcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccc
Confidence 999988543 3568899999999997 444 3577899999999999999864 3588999999999999999862
Q ss_pred CCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecC
Q 041467 169 TANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI 248 (746)
Q Consensus 169 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 248 (746)
.+ ++.+++|+.|++++|++++ + ..+..++ +|+.|++++|++++..| +..+++|++|++++|++.+..
T Consensus 215 ------~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~-~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~ 281 (466)
T 1o6v_A 215 ------TP--LGILTNLDELSLNGNQLKD-I-GTLASLT-NLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS 281 (466)
T ss_dssp ------GG--GGGCTTCCEEECCSSCCCC-C-GGGGGCT-TCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG
T ss_pred ------cc--ccccCCCCEEECCCCCccc-c-hhhhcCC-CCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccc
Confidence 12 6778999999999999985 3 3677787 79999999999997554 899999999999999998754
Q ss_pred CcCCCCCCCCceeeccccccccccc-ccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccc
Q 041467 249 PPLIGETPNLQLLNIGGNHLQGSIL-SSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTL 327 (746)
Q Consensus 249 p~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l 327 (746)
| +..+++|+.|++++|++++..+ ..+.+|+.+++.+|++.+..| +..+++|+.|++++|++++. ..+..+++|
T Consensus 282 ~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L 355 (466)
T 1o6v_A 282 P--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNI 355 (466)
T ss_dssp G--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred c--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCC
Confidence 4 8899999999999999997654 445667777777999998766 78999999999999999964 468899999
Q ss_pred cceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCccc
Q 041467 328 SLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSE 380 (746)
Q Consensus 328 ~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~ 380 (746)
+.|++++|++++..| +. .++.|+.|++++|.+++.
T Consensus 356 -~~L~l~~n~l~~~~~--~~---------------~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 356 -NWLSAGHNQISDLTP--LA---------------NLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp -CEEECCSSCCCBCGG--GT---------------TCTTCCEEECCCEEEECC
T ss_pred -CEEeCCCCccCccch--hh---------------cCCCCCEEeccCCcccCC
Confidence 689999999997665 33 456778999999999884
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-35 Score=311.39 Aligned_cols=214 Identities=21% Similarity=0.193 Sum_probs=171.4
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 46789999999999999996 8999986542 33456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+......
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG- 159 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC-
Confidence 9999999985 45789999999999999999999999 99999999999999999999999999998642211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhcc----ccCC
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSA----GIKG 686 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~----~~~~ 686 (746)
......+||+.|+|||++.+..++.+ +||||+||++|...... ...+.... ...+
T Consensus 160 -------~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s 229 (337)
T 1o6l_A 160 -------ATMKTFCGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLS 229 (337)
T ss_dssp -------CCBCCCEECGGGCCGGGGSSSCBCTT---HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSC
T ss_pred -------CcccccccChhhCChhhhcCCCCCch---hhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Confidence 12334789999999999988877554 99999999998211110 11111111 1123
Q ss_pred CccHHHHHHhhCCCCCCCCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+....+..|+..++..||.
T Consensus 230 ~~~~~li~~lL~~dP~~R~g 249 (337)
T 1o6l_A 230 PEAKSLLAGLLKKDPKQRLG 249 (337)
T ss_dssp HHHHHHHHHHTCSSTTTSTT
T ss_pred HHHHHHHHHHhhcCHHHhcC
Confidence 45566777888877777763
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=316.46 Aligned_cols=178 Identities=22% Similarity=0.311 Sum_probs=154.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++|||||+++++|.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 46799999999999999996 8999886443 33456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+.+|+|. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.+|.+||+|||+|+.+...
T Consensus 94 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-- 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-- 168 (384)
T ss_dssp ECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT--
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC--
Confidence 9999999986 45789999999999999999999999 9999999999999999999999999999876321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+.....++.++||||+||++|
T Consensus 169 -------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~ 208 (384)
T 4fr4_A 169 -------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAY 208 (384)
T ss_dssp -------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHH
T ss_pred -------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHH
Confidence 2234578999999999998644333455699999999999
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=307.36 Aligned_cols=177 Identities=20% Similarity=0.293 Sum_probs=157.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..++|+..+.||+|+||.||+ ||||++........+.+.+|+.++++++|||||++++++...+..++|||
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 456899999999999999997 89999876665566779999999999999999999999999999999999
Q ss_pred hccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 549 AISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 549 ~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
|+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+|+.......
T Consensus 98 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--- 171 (297)
T 3fxz_A 98 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--- 171 (297)
T ss_dssp CCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC---
T ss_pred CCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc---
Confidence 99999986 45689999999999999999999999 999999999999999999999999999987643221
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+||+.|+|||++.+..++. ++||||+||++|
T Consensus 172 -----~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 207 (297)
T 3fxz_A 172 -----KRSTMVGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAI 207 (297)
T ss_dssp -----CBCCCCSCGGGCCHHHHHCSCBCT---HHHHHHHHHHHH
T ss_pred -----ccCCccCCcCccChhhhcCCCCCc---HHHHHHHHHHHH
Confidence 123467999999999998887755 499999999998
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=312.02 Aligned_cols=184 Identities=24% Similarity=0.373 Sum_probs=154.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|+..+.||+|+||.||+ ||+|++........+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 46788899999999999997 899988655556677899999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999986 45789999999999999999999999 99999999999999999999999999998764332211
Q ss_pred C------cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 T------AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~------~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ..........+||+.|+|||++.+..++. ++|||||||++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~~l~ 213 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDE---KVDVFSFGIVLC 213 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCc---HHHHHHHHHHHH
Confidence 0 00111122468999999999998877755 499999999998
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=316.39 Aligned_cols=215 Identities=19% Similarity=0.176 Sum_probs=166.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|+++++.+ +|||||++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 357899999999999999996 899998754 233456788999999998 6999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+||||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 101 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 999999999986 46799999999999999999999999 9999999999999999999999999999853221
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-----------ccccchhhccc----c
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-----------KQNKSILKSAG----I 684 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-----------~~~~~i~~~~~----~ 684 (746)
.......+||+.|||||++.+..++. ++||||+||++|.... +....+..... .
T Consensus 178 --------~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~ 246 (353)
T 3txo_A 178 --------GVTTATFCGTPDYIAPEILQEMLYGP---AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTW 246 (353)
T ss_dssp ----------------CCGGGCCHHHHHHHHCTT---HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT
T ss_pred --------CccccccCCCcCeEChhhcCCCCcCC---ccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence 12234478999999999998877755 4999999999992111 11112222211 1
Q ss_pred CCCccHHHHHHhhCCCCCCCCC
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+......+..|+..++..||.
T Consensus 247 ~~~~~~~li~~lL~~dP~~R~~ 268 (353)
T 3txo_A 247 LHEDATGILKSFMTKNPTMRLG 268 (353)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTT
T ss_pred CCHHHHHHHHHHhhhCHHHccC
Confidence 2244556677777776665554
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-35 Score=310.06 Aligned_cols=220 Identities=20% Similarity=0.234 Sum_probs=169.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|...+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++|||||++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999996 9999986442 23346799999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+ +|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 88 ~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~-- 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-- 161 (336)
T ss_dssp ECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS--
T ss_pred EECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCC--
Confidence 9999 56664 46799999999999999999999999 9999999999999999999999999999865321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhccccCCCccH
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSAGIKGKKTV 690 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~~~~~~~~~ 690 (746)
......+||+.|+|||++.+..+. ++++||||+||++|...... ...+............
T Consensus 162 -------~~~~~~~gt~~y~aPE~~~~~~~~--~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s 232 (336)
T 3h4j_B 162 -------NFLKTSCGSPNYAAPEVINGKLYA--GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLS 232 (336)
T ss_dssp -------BTTCCCTTSTTTSCGGGSCCSGGG--CHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSC
T ss_pred -------cccccccCCcCcCCHHHHcCCCCC--CCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCC
Confidence 122346799999999999887663 33699999999998211110 1111111111122334
Q ss_pred HHHHHhhCCCCCCCCC-CCCccch
Q 041467 691 SFFLSLLSPSCSVFPL-TPSSNSF 713 (746)
Q Consensus 691 ~~~~~~~~~~~~~~p~-~p~~~~~ 713 (746)
+.+..++..+....|. ||+..++
T Consensus 233 ~~~~~li~~~L~~dP~~Rpt~~ei 256 (336)
T 3h4j_B 233 PGAQSLIRRMIVADPMQRITIQEI 256 (336)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred HHHHHHHHHHcCCChhHCcCHHHH
Confidence 4555566666666666 7776643
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=311.42 Aligned_cols=234 Identities=22% Similarity=0.275 Sum_probs=170.1
Q ss_pred HHHhhhhcCCCCCCeEeecCCeeEEE-------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 473 AELSKATNNFSPANKIREGGFNIVYN-------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 473 ~~~~~~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.++....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++...+..
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence 34444567899999999999999997 8999986442 33456789999999999999999999999999999
Q ss_pred cchhhhccCCccc----c----cCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 544 GFDFKAISNGQLR----L----CNLSLTQRVNIAIDVAFAIEYLRHHCQPS--IVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 544 ~lv~e~~~~g~l~----~----~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
++||||+++|+|. . ..+++.++..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 186 (309)
T 3p86_A 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186 (309)
T ss_dssp EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence 9999999999986 1 2389999999999999999999999 7 999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-------ccchhh------
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-------NKSILK------ 680 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-------~~~i~~------ 680 (746)
+...... .......||+.|+|||++.+..++.+ +||||+||++|...... ...+..
T Consensus 187 ~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~ 255 (309)
T 3p86_A 187 RLKASTF--------LSSKSAAGTPEWMAPEVLRDEPSNEK---SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255 (309)
T ss_dssp -----------------------CCTTSCHHHHTTCCCCTT---HHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSC
T ss_pred ccccccc--------cccccCCCCccccChhhhcCCCCCch---hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC
Confidence 7643211 12234679999999999998877554 99999999998211110 000000
Q ss_pred ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 681 SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
..........+.+..++..|+...|. ||+..++...++.+
T Consensus 256 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~ 296 (309)
T 3p86_A 256 KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296 (309)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 01111233445555666666666666 88888776665543
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=305.87 Aligned_cols=211 Identities=22% Similarity=0.244 Sum_probs=171.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|+.+++.++|||||++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 46789999999999999996 8999986543 23456788999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+++|+|. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+|+....
T Consensus 85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~--- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD--- 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS---
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC---
Confidence 9999999986 45789999999999999999999999 999999999999999999999999999987532
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccc-----------cccchhhcc----ccCC
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKK-----------QNKSILKSA----GIKG 686 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~-----------~~~~i~~~~----~~~~ 686 (746)
.....+||+.|+|||++.+..++.+ +||||+||++|..... ....+.... ...+
T Consensus 159 --------~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~ 227 (318)
T 1fot_A 159 --------VTYTLCGTPDYIAPEVVSTKPYNKS---IDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFN 227 (318)
T ss_dssp --------CBCCCCSCTTTCCHHHHTTCCBCTT---HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSC
T ss_pred --------ccccccCCccccCHhHhcCCCCCcc---cchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCC
Confidence 1224689999999999988877554 9999999999921111 111122211 1223
Q ss_pred CccHHHHHHhhCCCCCCCCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+..+.+..|+..++.+||.
T Consensus 228 ~~~~~li~~lL~~dp~~R~~ 247 (318)
T 1fot_A 228 EDVKDLLSRLITRDLSQRLG 247 (318)
T ss_dssp HHHHHHHHHHTCSCTTTCTT
T ss_pred HHHHHHHHHHhccCHHHcCC
Confidence 45667888888888887774
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-35 Score=308.76 Aligned_cols=194 Identities=30% Similarity=0.499 Sum_probs=166.1
Q ss_pred ccCCcccHHHHhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhh-hhhHHHHHHHHHhhcCCCCceeeEEE
Q 041467 465 QQFPMISHAELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQK-EASRSFAAEFNALRNIRHRNLIKIIT 535 (746)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~~ 535 (746)
.+...++..++....++|+..+.||+|+||.||+ ||||++..... .....+.+|++++++++||||+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 3455678899999999999999999999999997 89999865432 23346899999999999999999999
Q ss_pred EEecCCcccchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEE
Q 041467 536 ICSSIDFEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTH 606 (746)
Q Consensus 536 ~~~~~~~~~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~k 606 (746)
++...+..++||||+++|++. ...+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 999999999999999999985 22489999999999999999999999888999999999999999999999
Q ss_pred EccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 607 VGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 607 i~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+|||+++....... .......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 175 l~Dfg~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ 226 (326)
T 3uim_A 175 VGDFGLAKLMDYKDT-------HVTTAVRGTIGHIAPEYLSTGKSSEK---TDVFGYGVMLL 226 (326)
T ss_dssp ECCCSSCEECCSSSS-------CEECCCCSCGGGCCHHHHHHSEECHH---HHHHHHHHHHH
T ss_pred eccCccccccCcccc-------cccccccCCcCccCHHHhccCCCCcc---ccchhHHHHHH
Confidence 999999987643221 12234569999999999988777554 99999999998
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-35 Score=310.25 Aligned_cols=216 Identities=20% Similarity=0.213 Sum_probs=170.4
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFE 543 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~ 543 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|.++++.+ +|||||++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 3467899999999999999996 8999987543 33456688999999887 899999999999999999
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
|+||||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+|+....
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 9999999999986 45799999999999999999999999 999999999999999999999999999986422
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhccc----
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSAG---- 683 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~~---- 683 (746)
.. ......+||+.|+|||++.+..++. ++||||+||++|...... ...+....+
T Consensus 171 ~~--------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~ 239 (345)
T 1xjd_A 171 GD--------AKTNTFCGTPDYIAPEILLGQKYNH---SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR 239 (345)
T ss_dssp TT--------CCBCCCCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT
T ss_pred CC--------CcccCCCCCcccCChhhhcCCCCCC---hhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCc
Confidence 11 1233578999999999999877654 599999999998211110 111111111
Q ss_pred cCCCccHHHHHHhhCCCCCCCCC
Q 041467 684 IKGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
..+.+....+..|+..++..||.
T Consensus 240 ~~s~~~~~li~~lL~~dp~~R~~ 262 (345)
T 1xjd_A 240 WLEKEAKDLLVKLFVREPEKRLG 262 (345)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSBT
T ss_pred ccCHHHHHHHHHHhcCCHhHcCC
Confidence 12244556777777777776665
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-33 Score=308.53 Aligned_cols=292 Identities=21% Similarity=0.207 Sum_probs=235.2
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccC
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 99 (746)
++..-.......+..+..++++++|++|+|++|.+++ +| .|+.+++|++|+|++|.+.+. | ++.+++|++|++++
T Consensus 20 l~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~ 94 (457)
T 3bz5_A 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDS 94 (457)
T ss_dssp HHHHHHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCS
T ss_pred HHHHHHHhcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcC
Confidence 3333444555666777789999999999999999996 46 799999999999999999774 4 89999999999998
Q ss_pred CCCc-CcccCCCCCCEEeccCCCccc--ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccc
Q 041467 100 GGRI-DSLGHLKSLLLLSLAFNQFLS--LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176 (746)
Q Consensus 100 ~~~~-~~~~~l~~L~~L~Ls~N~l~~--l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 176 (746)
|... -.++++++|++|++++|++.. +.++++|+.|++++|++++. .++.+++|++|++++|...+ .+
T Consensus 95 N~l~~~~~~~l~~L~~L~L~~N~l~~l~~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~------~~- 164 (457)
T 3bz5_A 95 NKLTNLDVTPLTKLTYLNCDTNKLTKLDVSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKIT------KL- 164 (457)
T ss_dssp SCCSCCCCTTCTTCCEEECCSSCCSCCCCTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCC------CC-
T ss_pred CCCceeecCCCCcCCEEECCCCcCCeecCCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccc------cc-
Confidence 6543 248899999999999999965 56889999999999999975 38899999999999996543 12
Q ss_pred ccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCC
Q 041467 177 NLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETP 256 (746)
Q Consensus 177 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 256 (746)
.+..+++|+.|++++|++++ +| +..++ .|+.|++++|++++. .++.+++|++|++++|++++ +| ++.++
T Consensus 165 -~~~~l~~L~~L~ls~n~l~~-l~--l~~l~-~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~ 233 (457)
T 3bz5_A 165 -DVTPQTQLTTLDCSFNKITE-LD--VSQNK-LLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLT 233 (457)
T ss_dssp -CCTTCTTCCEEECCSSCCCC-CC--CTTCT-TCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCT
T ss_pred -ccccCCcCCEEECCCCccce-ec--cccCC-CCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccC
Confidence 36789999999999999996 55 77776 799999999999974 48999999999999999997 56 88999
Q ss_pred CCceeecccccccccccccccccChHH----------hhhccCCCCCCccccCCCCCCeeeecCCcCccccchh------
Q 041467 257 NLQLLNIGGNHLQGSILSSLGNLTLQT----------YLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQ------ 320 (746)
Q Consensus 257 ~L~~L~Ls~N~l~~~~~~~l~~l~~l~----------~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~------ 320 (746)
+|+.|++++|++++..+..+.+|+.+. +.+|.+.+.+| ++.+++|+.|++++|.+.+.+|..
T Consensus 234 ~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~ 311 (457)
T 3bz5_A 234 QLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITE 311 (457)
T ss_dssp TCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSC
T ss_pred CCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceE
Confidence 999999999999998777777665443 33455555555 466777888888888776666643
Q ss_pred --hhhcccccceEEccCccccc
Q 041467 321 --ILSVTTLSLYLELDNNLLNG 340 (746)
Q Consensus 321 --~~~l~~l~~~L~Ls~N~l~~ 340 (746)
+..++.+ +.|++++|++++
T Consensus 312 L~l~~~~~L-~~L~L~~N~l~~ 332 (457)
T 3bz5_A 312 LDLSQNPKL-VYLYLNNTELTE 332 (457)
T ss_dssp CCCTTCTTC-CEEECTTCCCSC
T ss_pred echhhcccC-CEEECCCCcccc
Confidence 2333455 467777777765
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-33 Score=309.82 Aligned_cols=333 Identities=25% Similarity=0.283 Sum_probs=255.9
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccC-------------cEEecccCcCCccCCccccCCCCCC
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISL-------------ERLILSNNSFSCAIPANLSSGSNLI 69 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l~~~~p~~~~~l~~L~ 69 (746)
+|++..+ ++.+..+++|++|+|++|.+.|.+|.+++++.+| ++|++++|.+++ +|.. .++|+
T Consensus 20 ~n~l~~i-P~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~L~ 94 (454)
T 1jl5_A 20 SSNLTEM-PVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPHLE 94 (454)
T ss_dssp ---------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTTCS
T ss_pred cCchhhC-ChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCCCC
Confidence 4555333 3445678999999999999999999999999875 999999999996 5653 37899
Q ss_pred eeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCC-CCCCEEeccCCCccc---ccCCCCCcEeeCccCcccccC
Q 041467 70 KLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHL-KSLLLLSLAFNQFLS---LSNASSLEMIEFSRNQFSGGV 145 (746)
Q Consensus 70 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l-~~L~~L~Ls~N~l~~---l~~l~~L~~L~Ls~N~l~~~~ 145 (746)
+|++++|.+.+ +|.. +++|+.|++++|... .+..+ ++|++|++++|++.. +.++++|++|++++|++++ +
T Consensus 95 ~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~~~~L~~L~L~~n~l~~lp~~~~l~~L~~L~l~~N~l~~-l 168 (454)
T 1jl5_A 95 SLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKK-L 168 (454)
T ss_dssp EEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSC-C
T ss_pred EEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccCCCCCCCEEECcCCCCCCCcccCCCCCCCEEECCCCcCcc-c
Confidence 99999999977 6653 478999999887543 33334 699999999999854 5678899999999999996 4
Q ss_pred CccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCC
Q 041467 146 SVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIP 225 (746)
Q Consensus 146 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p 225 (746)
|.. .++|++|++++|.+++ +| .++++++|+.|++++|++++ +|... .+|+.|++++|+++ .+|
T Consensus 169 p~~---~~~L~~L~L~~n~l~~-------l~-~~~~l~~L~~L~l~~N~l~~-l~~~~----~~L~~L~l~~n~l~-~lp 231 (454)
T 1jl5_A 169 PDL---PPSLEFIAAGNNQLEE-------LP-ELQNLPFLTAIYADNNSLKK-LPDLP----LSLESIVAGNNILE-ELP 231 (454)
T ss_dssp CCC---CTTCCEEECCSSCCSS-------CC-CCTTCTTCCEEECCSSCCSS-CCCCC----TTCCEEECCSSCCS-SCC
T ss_pred CCC---cccccEEECcCCcCCc-------Cc-cccCCCCCCEEECCCCcCCc-CCCCc----CcccEEECcCCcCC-ccc
Confidence 543 3599999999999986 23 37899999999999999985 55432 37999999999998 677
Q ss_pred ccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCe
Q 041467 226 HGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLG 305 (746)
Q Consensus 226 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~ 305 (746)
. |+.+++|++|++++|++.+ +|.. +++|+.|++++|++++ +|..+.+++.+++.+|.+++. |.. .++|+.
T Consensus 232 ~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~~~~L~~L~ls~N~l~~l-~~~---~~~L~~ 301 (454)
T 1jl5_A 232 E-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPELPQSLTFLDVSENIFSGL-SEL---PPNLYY 301 (454)
T ss_dssp C-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSEE-SCC---CTTCCE
T ss_pred c-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcccCcCCEEECcCCccCcc-cCc---CCcCCE
Confidence 4 8999999999999999985 5553 4789999999999996 566678888888888988862 211 268999
Q ss_pred eeecCCcCccccchhhhhc-ccccceEEccCccccccCchhhhcccCCceeecCC-----CCCCCCCCCEEEccCCcCcc
Q 041467 306 LSVSHNKLTSTLPQQILSV-TTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPE-----YPENLSFFELLNLSYNYFGS 379 (746)
Q Consensus 306 L~Ls~N~l~~~~p~~~~~l-~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~-----~~~~l~~L~~L~ls~N~l~~ 379 (746)
|++++|++++ +|. + ..+ +.|++++|++++ +|.. +++|+.|++.. .+..++.|+.|++++|++++
T Consensus 302 L~l~~N~l~~-i~~----~~~~L-~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~lp~~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 302 LNASSNEIRS-LCD----LPPSL-EELNVSNNKLIE-LPAL---PPRLERLIASFNHLAEVPELPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp EECCSSCCSE-ECC----CCTTC-CEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSS
T ss_pred EECcCCcCCc-ccC----CcCcC-CEEECCCCcccc-cccc---CCcCCEEECCCCccccccchhhhccEEECCCCCCCc
Confidence 9999999985 442 3 355 689999999985 7765 46777775421 12246789999999999999
Q ss_pred --cCCC
Q 041467 380 --EVPT 383 (746)
Q Consensus 380 --~~p~ 383 (746)
.+|.
T Consensus 372 l~~ip~ 377 (454)
T 1jl5_A 372 FPDIPE 377 (454)
T ss_dssp CCCCCT
T ss_pred CCCChH
Confidence 6664
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=304.75 Aligned_cols=187 Identities=21% Similarity=0.291 Sum_probs=160.6
Q ss_pred CcccHHHHhhhhcC----------CCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCC
Q 041467 468 PMISHAELSKATNN----------FSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHR 528 (746)
Q Consensus 468 ~~~~~~~~~~~~~~----------~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~Hp 528 (746)
+.++.+++..+++. |...+.||+|+||.||+ ||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45677777666643 66678999999999996 999998766555567799999999999999
Q ss_pred ceeeEEEEEecCCcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 529 NLIKIITICSSIDFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 529 nIv~l~~~~~~~~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
|||++++++...+..++||||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~ 179 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGR 179 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCC
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCc
Confidence 9999999999999999999999999986 45789999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+||+|||+++....... ......||+.|+|||++.+..++. ++||||+||++|
T Consensus 180 ~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~slG~il~ 232 (321)
T 2c30_A 180 VKLSDFGFCAQISKDVP--------KRKSLVGTPYWMAPEVISRSLYAT---EVDIWSLGIMVI 232 (321)
T ss_dssp EEECCCTTCEECCSSSC--------CBCCCCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred EEEeeeeeeeecccCcc--------ccccccCCccccCHhhhcCCCCCc---hhhHHHHHHHHH
Confidence 99999999987643221 123467999999999998877655 499999999998
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-35 Score=323.17 Aligned_cols=176 Identities=19% Similarity=0.236 Sum_probs=146.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID----- 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~----- 541 (746)
..++|+..+.||+|+||.||+ ||||++... .....+++.+|+++++.++|||||++++++....
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 457899999999999999996 899998643 2344567899999999999999999999997654
Q ss_pred -cccchhhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 542 -FEGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 542 -~~~lv~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
..|+||||+.++.+. ...+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 140 ~~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 140 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp CEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred CeEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 459999999877544 45689999999999999999999999 999999999999999999999999999987532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......+||++|+|||++.+..++. ++||||+||++|
T Consensus 217 ~---------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlG~il~ 254 (464)
T 3ttj_A 217 S---------FMMTPYVVTRYYRAPEVILGMGYKE---NVDIWSVGCIMG 254 (464)
T ss_dssp C---------CCC----CCCTTCCHHHHTTCCCCT---THHHHHHHHHHH
T ss_pred C---------cccCCCcccccccCHHHHcCCCCCH---HHHHHHHHHHHH
Confidence 1 1234478999999999999887755 499999999998
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=314.32 Aligned_cols=177 Identities=20% Similarity=0.246 Sum_probs=152.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|..+++++ +|||||+++++|.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 346799999999999999996 8999987542 23345688999999887 8999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 130 lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 999999999985 46799999999999999999999999 9999999999999999999999999999853211
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......+||+.|||||++.+..++. ++||||+||++|
T Consensus 207 --------~~~~~~~~gt~~Y~aPE~l~~~~~~~---~~DiwslGvlly 244 (396)
T 4dc2_A 207 --------GDTTSTFCGTPNYIAPEILRGEDYGF---SVDWWALGVLMF 244 (396)
T ss_dssp --------TCCBCCCCBCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred --------CCccccccCCcccCCchhhcCCCCCh---HHHHHHHHHHHH
Confidence 12234578999999999999887755 599999999998
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-35 Score=316.42 Aligned_cols=187 Identities=21% Similarity=0.203 Sum_probs=157.1
Q ss_pred HHHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEec
Q 041467 472 HAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSS 539 (746)
Q Consensus 472 ~~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~ 539 (746)
..+.....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++|||||+++++|.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 345555678999999999999999997 8999986532 2334568899999999999999999999999
Q ss_pred CCcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 540 IDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
.+..|+||||+++|+|. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|||+|
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhh
Confidence 99999999999999986 24799999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccc----cccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN----LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~~~~~DiwSlG~i~~ 668 (746)
+....... ......+||+.|||||++.... ...++.++||||+||++|
T Consensus 210 ~~~~~~~~-------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvily 261 (412)
T 2vd5_A 210 LKLRADGT-------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAY 261 (412)
T ss_dssp EECCTTSC-------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHH
T ss_pred eeccCCCc-------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHH
Confidence 87643211 1223468999999999998421 112345699999999999
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=307.01 Aligned_cols=187 Identities=30% Similarity=0.480 Sum_probs=160.5
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID 541 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~ 541 (746)
++..++...+++|+..+.||+|+||.||+ ||||++........+.+.+|++++++++|||||++++++...+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 33455667889999999999999999997 8999887655556678999999999999999999999999999
Q ss_pred cccchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccc
Q 041467 542 FEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGl 612 (746)
..++||||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 999999999999986 12489999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++........ .......||+.|+|||++.+..++. ++|||||||++|
T Consensus 186 ~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~il~ 232 (321)
T 2qkw_B 186 SKKGTELDQT------HLSTVVKGTLGYIDPEYFIKGRLTE---KSDVYSFGVVLF 232 (321)
T ss_dssp CEECSSSSCC------CCBCCCEEETTTCCHHHHHHCBCCT---HHHHHHHHHHHH
T ss_pred cccccccccc------ccccccCCCccccCHHHhcCCCCCc---ccchHhHHHHHH
Confidence 9865332211 1123467999999999998877654 599999999998
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=308.61 Aligned_cols=215 Identities=20% Similarity=0.197 Sum_probs=170.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|.++++.+ +||||+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 356899999999999999996 8999987542 33456788999999988 7999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.+|.+||+|||+|+.....
T Consensus 98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 999999999986 35799999999999999999999999 9999999999999999999999999999864221
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhccc----c
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSAG----I 684 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~~----~ 684 (746)
. ......+||+.|+|||++.+..++. ++||||+||++|...... ...+..... .
T Consensus 175 ~--------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~ 243 (353)
T 2i0e_A 175 G--------VTTKTFCGTPDYIAPEIIAYQPYGK---SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS 243 (353)
T ss_dssp T--------CCBCCCCSCGGGCCHHHHTTCCBST---HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT
T ss_pred C--------cccccccCCccccChhhhcCCCcCC---cccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCC
Confidence 1 1233478999999999998877754 599999999998211110 111222111 1
Q ss_pred CCCccHHHHHHhhCCCCCCCCC
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+.+....+..|+..++..||.
T Consensus 244 ~s~~~~~li~~lL~~dP~~R~~ 265 (353)
T 2i0e_A 244 MSKEAVAICKGLMTKHPGKRLG 265 (353)
T ss_dssp SCHHHHHHHHHHTCSCTTSCTT
T ss_pred CCHHHHHHHHHHhhcCHHHcCC
Confidence 2245556777777777766664
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-35 Score=309.26 Aligned_cols=232 Identities=20% Similarity=0.214 Sum_probs=176.5
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
.++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 35788899999999999995 899998654 23445679999999999999999999999999999999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999986 34789999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc--ccc----------cchhhc-cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQN----------KSILKS-AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~~----------~~i~~~-~~~~~ 686 (746)
... ........||+.|+|||++.+..++.+ +|||||||++|.... ... ..+... .....
T Consensus 205 ~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 276 (325)
T 3kul_A 205 PDA-----AYTTTGGKIPIRWTAPEAIAFRTFSSA---SDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAP 276 (325)
T ss_dssp --C-----CEECC---CCGGGSCHHHHHHCEECHH---HHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCC
T ss_pred ccc-----eeeccCCCCcccccCHhHhcCCCCCcH---HHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCC
Confidence 221 112233456889999999988777655 999999999983221 110 011111 11122
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
....+.+..++..|+...|. ||++.++...++.+.
T Consensus 277 ~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 277 MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 33445555666666666666 888888777666543
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=316.30 Aligned_cols=187 Identities=20% Similarity=0.187 Sum_probs=156.5
Q ss_pred HHHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEec
Q 041467 472 HAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSS 539 (746)
Q Consensus 472 ~~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~ 539 (746)
..++....++|+..+.||+|+||+||+ ||||++.... ....+.+.+|+.+++.++|||||+++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 344556678999999999999999997 8999986532 2223458899999999999999999999999
Q ss_pred CCcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 540 IDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
.+..++|||||++|+|. ...+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 99999999999999986 35789999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
+....... ......+||+.|||||++.... ...++.++||||+||++|
T Consensus 223 ~~~~~~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~ 272 (437)
T 4aw2_A 223 LKLMEDGT-------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMY 272 (437)
T ss_dssp EECCTTSC-------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHH
T ss_pred hhcccCCC-------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHH
Confidence 87543221 1223468999999999997311 112345699999999998
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-32 Score=288.85 Aligned_cols=300 Identities=23% Similarity=0.337 Sum_probs=236.6
Q ss_pred cccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 15 ILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
..+++|++|++++|.+. .+|. +..+++|++|+|++|++++ +|. |.++++|++|++++|.+.. + +.+..+++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSE
T ss_pred hhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCE
Confidence 35688999999999997 4554 8899999999999999985 454 9999999999999998865 3 46888999999
Q ss_pred EEccCCCCc--CcccCCCCCCEEeccCCCc----ccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCC
Q 041467 95 LRIDCGGRI--DSLGHLKSLLLLSLAFNQF----LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSG 168 (746)
Q Consensus 95 L~l~~~~~~--~~~~~l~~L~~L~Ls~N~l----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 168 (746)
|+++++... ..+..+++|+.|++++|.. ..+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+
T Consensus 115 L~l~~n~i~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~- 191 (347)
T 4fmz_A 115 LYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED- 191 (347)
T ss_dssp EECTTSCCCCCGGGTTCTTCCEEECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-
T ss_pred EECcCCcccCchhhccCCceeEEECCCCCCcccccchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-
Confidence 999876543 3477888899999988854 346778888899998888876544 7788889999998888875
Q ss_pred CCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecC
Q 041467 169 TANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI 248 (746)
Q Consensus 169 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 248 (746)
++. +..+++|+.|++++|.+++..+ +..++ +|+.|++++|++++..+ +..+++|++|++++|.+.+.
T Consensus 192 ------~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~-~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~- 258 (347)
T 4fmz_A 192 ------ISP-LASLTSLHYFTAYVNQITDITP--VANMT-RLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI- 258 (347)
T ss_dssp ------CGG-GGGCTTCCEEECCSSCCCCCGG--GGGCT-TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-
T ss_pred ------ccc-ccCCCccceeecccCCCCCCch--hhcCC-cCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-
Confidence 222 6778888888988888875433 66666 68888888888886433 88888888888888888753
Q ss_pred CcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhccccc
Q 041467 249 PPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLS 328 (746)
Q Consensus 249 p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~ 328 (746)
+.+..+++|++|++++|.+++ + +.+..+++|+.|++++|++++..|..+..++++
T Consensus 259 -~~~~~l~~L~~L~l~~n~l~~----------------------~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L- 313 (347)
T 4fmz_A 259 -NAVKDLTKLKMLNVGSNQISD----------------------I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL- 313 (347)
T ss_dssp -GGGTTCTTCCEEECCSSCCCC----------------------C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC-
T ss_pred -hhHhcCCCcCEEEccCCccCC----------------------C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccC-
Confidence 467888888888888888763 1 246778899999999999998888888999998
Q ss_pred ceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCc
Q 041467 329 LYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFG 378 (746)
Q Consensus 329 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~ 378 (746)
+.|++++|++++..| +. .++.|+.|++++|.|+
T Consensus 314 ~~L~L~~n~l~~~~~--~~---------------~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 314 TTLFLSQNHITDIRP--LA---------------SLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSSCCCCGG--GG---------------GCTTCSEESSSCC---
T ss_pred CEEEccCCccccccC--hh---------------hhhccceeehhhhccc
Confidence 689999999986444 33 4556788888888875
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=308.02 Aligned_cols=211 Identities=19% Similarity=0.207 Sum_probs=170.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++|||||++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 46899999999999999996 8999986543 23456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+.....
T Consensus 120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence 9999999986 45789999999999999999999999 9999999999999999999999999999875321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhcc----ccCC
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSA----GIKG 686 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~----~~~~ 686 (746)
....+||+.|+|||++.+..++. ++||||+||++|...... ...+.... ...+
T Consensus 195 ---------~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~ 262 (350)
T 1rdq_E 195 ---------TWTLCGTPEALAPEIILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFS 262 (350)
T ss_dssp ---------BCCCEECGGGCCHHHHTTCCBCT---HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCC
T ss_pred ---------cccccCCccccCHHHhcCCCCCC---cCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Confidence 22468999999999999877654 599999999998211110 11121111 1122
Q ss_pred CccHHHHHHhhCCCCCCCCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~ 706 (746)
......+..|+..++..||.
T Consensus 263 ~~~~~li~~lL~~dp~~R~~ 282 (350)
T 1rdq_E 263 SDLKDLLRNLLQVDLTKRFG 282 (350)
T ss_dssp HHHHHHHHHHSCSCTTTCTT
T ss_pred HHHHHHHHHHhhcCHHhccC
Confidence 45566777777777776664
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=311.66 Aligned_cols=230 Identities=19% Similarity=0.252 Sum_probs=175.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE----------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEec
Q 041467 478 ATNNFSPANKIREGGFNIVYN----------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSS 539 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~----------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~ 539 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +|||||+++++|..
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 346788999999999999994 8999886542 34456799999999999 89999999999999
Q ss_pred CCcccchhhhccCCccc-----c----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCee
Q 041467 540 IDFEGFDFKAISNGQLR-----L----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~-----~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NIL 598 (746)
.+..++||||+++|+|. . ..+++.++..++.||+.||+|||++ +|+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 99999999999999985 1 2478999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc---
Q 041467 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ--- 674 (746)
Q Consensus 599 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~--- 674 (746)
++.++.+||+|||+|+........ .......||+.|+|||++.+..++.+ +|||||||++|.... ..
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~---~DvwslG~il~ellt~g~~p~ 306 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQ---SDVWSFGVLMWEIFTLGGSPY 306 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTT------CTTTTTTSCGGGCCHHHHHTCCCCHH---HHHHHHHHHHHHHHTTSCCSS
T ss_pred ECCCCCEEEccccCCcccCcccce------ecccCCCcccceECHhHhcCCCCCcH---HHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999876432211 11223567899999999988877655 999999999983221 10
Q ss_pred ----ccchhh---c--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 675 ----NKSILK---S--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 675 ----~~~i~~---~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
...++. . .......+.+.+..++..|+...|. ||+..++...+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~ 361 (370)
T 2psq_A 307 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361 (370)
T ss_dssp TTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111111 1 1111223344555566666666666 7888876655544
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=301.08 Aligned_cols=179 Identities=25% Similarity=0.349 Sum_probs=147.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--------------------------hhhHHHHHHHHHhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQK--------------------------EASRSFAAEFNALR 523 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 523 (746)
.++|+..+.||+|+||.||+ ||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46899999999999999997 89998854321 12346889999999
Q ss_pred cCCCCceeeEEEEEec--CCcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCe
Q 041467 524 NIRHRNLIKIITICSS--IDFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597 (746)
Q Consensus 524 ~l~HpnIv~l~~~~~~--~~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NI 597 (746)
+++||||+++++++.+ .+..++||||+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNL 168 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHE
Confidence 9999999999999987 45789999999999886 45689999999999999999999999 999999999999
Q ss_pred eeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 598 LLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 598 Ll~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+++.++.+||+|||+++...... .......||+.|+|||++.+......+.++||||+||++|
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~ 231 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSD--------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY 231 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSS--------CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHH
T ss_pred EECCCCCEEEecCCCcccccccc--------ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHH
Confidence 99999999999999998764321 1123467999999999998765322244699999999998
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=294.22 Aligned_cols=249 Identities=22% Similarity=0.295 Sum_probs=160.1
Q ss_pred ccccEEecccCcCcc--cCchhhhCCccCcEEeccc-CcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 18 TFLRYINLVNNGFNG--EIPHQIGRLISLERLILSN-NSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
.+++.|+|++|.+++ .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+.+.+|..+.
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~------- 122 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS------- 122 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGG-------
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHh-------
Confidence 467788888888877 7777788888888888874 777777777777777777777777777655555433
Q ss_pred EEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 95 LRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 95 L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
++++|++|+|++|++++.+|..|..+++|++|+|++|.+++ .
T Consensus 123 --------------------------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~------~ 164 (313)
T 1ogq_A 123 --------------------------------QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG------A 164 (313)
T ss_dssp --------------------------------GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEE------E
T ss_pred --------------------------------CCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccC------c
Confidence 33445555566666666666667777777777777776654 3
Q ss_pred ccccccCCC-CCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCC
Q 041467 175 FINLLTNCS-KLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIG 253 (746)
Q Consensus 175 ~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 253 (746)
+|..+..++ +|+.|++++|++++.+|..+..+. |+.|++++|++++..|..|..+++|+.|+|++|++.+.+|. +.
T Consensus 165 ~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~--L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~ 241 (313)
T 1ogq_A 165 IPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN--LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VG 241 (313)
T ss_dssp CCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC--CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CC
T ss_pred CCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc--ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-cc
Confidence 455566665 666666666666666666666553 66666666666666666666666666666666666554444 55
Q ss_pred CCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEc
Q 041467 254 ETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLEL 333 (746)
Q Consensus 254 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~L 333 (746)
.+++|++|+|++|++++ .+|..|..+++|+.|+|++|+++|.+|.. ..++.+ ..+++
T Consensus 242 ~l~~L~~L~Ls~N~l~~---------------------~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L-~~l~l 298 (313)
T 1ogq_A 242 LSKNLNGLDLRNNRIYG---------------------TLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRF-DVSAY 298 (313)
T ss_dssp CCTTCCEEECCSSCCEE---------------------CCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGS-CGGGT
T ss_pred ccCCCCEEECcCCcccC---------------------cCChHHhcCcCCCEEECcCCcccccCCCC-cccccc-ChHHh
Confidence 55666666666655543 33444555556666666666666555554 555555 34566
Q ss_pred cCcc
Q 041467 334 DNNL 337 (746)
Q Consensus 334 s~N~ 337 (746)
++|+
T Consensus 299 ~~N~ 302 (313)
T 1ogq_A 299 ANNK 302 (313)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 6665
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=306.11 Aligned_cols=176 Identities=20% Similarity=0.245 Sum_probs=153.4
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~l 545 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +|||||++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 46789999999999999996 8999987542 33456788999999988 89999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|+......
T Consensus 88 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 99999999986 45799999999999999999999999 99999999999999999999999999998642211
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 165 --------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 201 (345)
T 3a8x_A 165 --------DTTSTFCGTPNYIAPEILRGEDYGF---SVDWWALGVLMF 201 (345)
T ss_dssp --------CCBCCCCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred --------CcccccCCCccccCccccCCCCCCh---HHhHHHHHHHHH
Confidence 1233478999999999999877654 599999999999
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=301.18 Aligned_cols=177 Identities=24% Similarity=0.347 Sum_probs=149.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||+|++... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 45799999999999999996 899987532 234456799999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 9999999986 45689999999999999999999999 999999999999999999999999999987633211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 167 -------~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 203 (294)
T 4eqm_A 167 -------TQTNHVLGTVQYFSPEQAKGEATDEC---TDIYSIGIVLY 203 (294)
T ss_dssp ---------------CCSSCCHHHHHTCCCCTT---HHHHHHHHHHH
T ss_pred -------cccCccccCccccCHhHhcCCCCCch---HhHHHHHHHHH
Confidence 11233679999999999988877554 99999999998
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=304.26 Aligned_cols=174 Identities=21% Similarity=0.238 Sum_probs=151.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|+..+.||+|+||.||+ ||+|++.... .....+.+|+++++.++|||||++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 46899999999999999997 8999886432 3345688999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC--CCcEEEccccccccccCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ--DVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~--~~~~ki~DfGla~~~~~~~~ 621 (746)
+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~-- 157 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-- 157 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC--
Confidence 9999985 23689999999999999999999999 9999999999999986 789999999999876321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+..++. ++||||+||++|
T Consensus 158 -------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 194 (321)
T 1tki_A 158 -------DNFRLLFTAPEYYAPEVHQHDVVST---ATDMWSLGTLVY 194 (321)
T ss_dssp -------CEEEEEESCGGGSCHHHHTTCEECH---HHHHHHHHHHHH
T ss_pred -------CccccccCChhhcCcHHhcCCCCCc---hhhHHHHHHHHH
Confidence 1223467999999999998876655 499999999998
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=314.71 Aligned_cols=186 Identities=16% Similarity=0.201 Sum_probs=157.6
Q ss_pred HHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC
Q 041467 473 AELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSI 540 (746)
Q Consensus 473 ~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~ 540 (746)
.++....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++|||||+++++|.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 34555678999999999999999996 8999986532 22344588999999999999999999999999
Q ss_pred CcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 541 DFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
+..|+||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.+|.+||+|||+|+..
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~ 218 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred CEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence 9999999999999986 45789999999999999999999999 9999999999999999999999999999875
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccc-cCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLE-NREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~~~~~DiwSlG~i~~ 668 (746)
.... .....+.+||+.|||||++.+.... .++.++||||+||++|
T Consensus 219 ~~~~-------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvily 264 (410)
T 3v8s_A 219 NKEG-------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 264 (410)
T ss_dssp CTTS-------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHH
T ss_pred ccCC-------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHH
Confidence 3221 1123357899999999999876521 1345699999999999
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=305.40 Aligned_cols=179 Identities=21% Similarity=0.306 Sum_probs=151.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+.+++.++|||||++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 46899999999999999997 8999986443 2234568899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-- 160 (323)
T 3tki_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-- 160 (323)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE--
T ss_pred cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCc--
Confidence 99999886 34689999999999999999999999 999999999999999999999999999986532211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......+||+.|+|||++.+..+. +.++||||+||++|
T Consensus 161 ----~~~~~~~~gt~~y~aPE~~~~~~~~--~~~~DiwslG~il~ 199 (323)
T 3tki_A 161 ----ERLLNKMCGTLPYVAPELLKRREFH--AEPVDVWSCGIVLT 199 (323)
T ss_dssp ----ECCBCSCCSCGGGSCHHHHHCSSBC--HHHHHHHHHHHHHH
T ss_pred ----ccccCCCccCcCccCcHHhccCCCC--CCcccHHHHHHHHH
Confidence 1222347899999999999877652 23599999999998
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-32 Score=296.73 Aligned_cols=294 Identities=18% Similarity=0.171 Sum_probs=251.9
Q ss_pred CCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 4 n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
|.+..+|+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.+....+
T Consensus 55 ~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~ 134 (390)
T 3o6n_A 55 STMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPR 134 (390)
T ss_dssp CEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCH
Confidence 34455555556678999999999999998888899999999999999999998888889999999999999999976555
Q ss_pred hhhcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCCccc--ccCCCCCcEeeCccCcccccCCccccCCCCCCE
Q 041467 84 TEICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLS--LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSW 157 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~--l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 157 (746)
..+.++++|++|+++++... ..+.++++|+.|++++|++.. +..+++|+.|++++|.+++. ...++|+.
T Consensus 135 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~ 209 (390)
T 3o6n_A 135 GIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTL-----AIPIAVEE 209 (390)
T ss_dssp TTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEE-----ECCSSCSE
T ss_pred HHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeeccccccccc-----CCCCcceE
Confidence 55799999999999986543 458899999999999999965 46789999999999999853 44578999
Q ss_pred EEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCee
Q 041467 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWL 237 (746)
Q Consensus 158 L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L 237 (746)
|++++|.++.. +. ...++|+.|++++|.+++. ..+..++ +|+.|++++|.+++..|..|.++++|++|
T Consensus 210 L~l~~n~l~~~-------~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 277 (390)
T 3o6n_A 210 LDASHNSINVV-------RG--PVNVELTILKLQHNNLTDT--AWLLNYP-GLVEVDLSYNELEKIMYHPFVKMQRLERL 277 (390)
T ss_dssp EECCSSCCCEE-------EC--CCCSSCCEEECCSSCCCCC--GGGGGCT-TCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred EECCCCeeeec-------cc--cccccccEEECCCCCCccc--HHHcCCC-CccEEECCCCcCCCcChhHccccccCCEE
Confidence 99999999763 22 2347999999999999853 5788887 79999999999999889999999999999
Q ss_pred ecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCcccc
Q 041467 238 TMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTL 317 (746)
Q Consensus 238 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 317 (746)
+|++|++.+ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|++++ +
T Consensus 278 ~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~----------------------~~~~~~~~l~~L~~L~L~~N~i~~-~ 333 (390)
T 3o6n_A 278 YISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL----------------------HVERNQPQFDRLENLYLDHNSIVT-L 333 (390)
T ss_dssp ECCSSCCCE-EECSSSCCTTCCEEECCSSCCC----------------------CCGGGHHHHTTCSEEECCSSCCCC-C
T ss_pred ECCCCcCcc-cCcccCCCCCCCEEECCCCcce----------------------ecCccccccCcCCEEECCCCccce-e
Confidence 999999986 5677789999999999999987 445567778899999999999984 5
Q ss_pred chhhhhcccccceEEccCcccccc
Q 041467 318 PQQILSVTTLSLYLELDNNLLNGS 341 (746)
Q Consensus 318 p~~~~~l~~l~~~L~Ls~N~l~~~ 341 (746)
| +..++.+ +.|++++|++++.
T Consensus 334 ~--~~~~~~L-~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 334 K--LSTHHTL-KNLTLSHNDWDCN 354 (390)
T ss_dssp C--CCTTCCC-SEEECCSSCEEHH
T ss_pred C--chhhccC-CEEEcCCCCccch
Confidence 5 6677888 6899999999864
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-34 Score=313.35 Aligned_cols=178 Identities=20% Similarity=0.312 Sum_probs=152.3
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
...++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 3456799999999999999997 8999886432 3345678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC---CCCcEEEcccccccccc
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~---~~~~~ki~DfGla~~~~ 617 (746)
||||+.+|++. ...+++.++..++.||+.|++|||+. +|+||||||+|||++ +++.+||+|||+|+...
T Consensus 88 v~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp EECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999985 46789999999999999999999999 999999999999998 56889999999998753
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 165 ~~~--------~~~~~~~gt~~Y~APE~l~~~~~~~---~~DIwSlGvily 204 (444)
T 3soa_A 165 GEQ--------QAWFGFAGTPGYLSPEVLRKDPYGK---PVDLWACGVILY 204 (444)
T ss_dssp TTC--------CBCCCSCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred CCC--------ceeecccCCcccCCHHHhcCCCCCC---ccccHHHHHHHH
Confidence 321 1223478999999999998877755 599999999998
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=311.49 Aligned_cols=230 Identities=20% Similarity=0.245 Sum_probs=165.7
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..+|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++|||||++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 35799999999999999996 899998654 23445679999999999999999999999999999999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999986 23689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--cccc----------cchhhc-cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQN----------KSILKS-AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~~----------~~i~~~-~~~~~ 686 (746)
... ........+|..|+|||++.+..++.+ +|||||||++|... .... ..+... .....
T Consensus 201 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~ 272 (373)
T 2qol_A 201 PEA-----AYTTRGGKIPIRWTSPEAIAYRKFTSA---SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCC
T ss_pred Ccc-----ceeccCCCcCCCccChhhhccCCcCch---hcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 211 111222346788999999988877655 99999999998321 1110 011111 11122
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
....+.+..++..|+...|. ||++.++...+++
T Consensus 273 ~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~ 306 (373)
T 2qol_A 273 MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306 (373)
T ss_dssp TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHH
Confidence 23344555555556666666 8888876665544
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-34 Score=306.31 Aligned_cols=176 Identities=22% Similarity=0.354 Sum_probs=152.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 456799999999999999997 8999986542 33456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC---CcEEEccccccccccC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD---VVTHVGDLGLAKFLYG 618 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~---~~~ki~DfGla~~~~~ 618 (746)
|||+++|++. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.+ +.+||+|||+++....
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp ECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 9999999985 45689999999999999999999999 99999999999999764 4699999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 184 ~---------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 221 (362)
T 2bdw_A 184 S---------EAWHGFAGTPGYLSPEVLKKDPYSK---PVDIWACGVILY 221 (362)
T ss_dssp C---------CSCCCSCSCTTTCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred C---------cccccCCCCccccCHHHHccCCCCc---hhhHHHHHHHHH
Confidence 2 1123468999999999998877654 599999999999
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=302.16 Aligned_cols=225 Identities=16% Similarity=0.224 Sum_probs=173.9
Q ss_pred hcCCCCCCeEeecCCeeEEE----------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 479 TNNFSPANKIREGGFNIVYN----------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~----------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
.++|+..+.||+|+||.||+ ||+|++........+.+.+|++++++++|||||++++++.+.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 45788999999999999996 78998876666667789999999999999999999999999999
Q ss_pred ccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc--------EEEc
Q 041467 543 EGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV--------THVG 608 (746)
Q Consensus 543 ~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~--------~ki~ 608 (746)
.++||||+++|+|. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999986 23489999999999999999999999 9999999999999988877 9999
Q ss_pred cccccccccCCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceeeccccc-c----------cc
Q 041467 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFALNEKK-Q----------NK 676 (746)
Q Consensus 609 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~~~~~~-~----------~~ 676 (746)
|||+++.... .....||+.|+|||++.+ ..++. ++||||+||++|..... . ..
T Consensus 164 Dfg~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~---~~DiwslG~il~el~~g~~~~~~~~~~~~~~ 228 (289)
T 4fvq_A 164 DPGISITVLP------------KDILQERIPWVPPECIENPKNLNL---ATDKWSFGTTLWEICSGGDKPLSALDSQRKL 228 (289)
T ss_dssp CCCSCTTTSC------------HHHHHHTTTTSCHHHHHCGGGCCH---HHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred cCcccccccC------------ccccCCcCcccCHHHhCCCCCCCc---hhHHHHHHHHHHHHHcCCCCCccccchHHHH
Confidence 9999875421 122568999999999987 44444 59999999999822210 0 00
Q ss_pred chhhcc----ccCCCccHHHHHHhhCCCCCCCCCCCCccchhhhcccCCCCC
Q 041467 677 SILKSA----GIKGKKTVSFFLSLLSPSCSVFPLTPSSNSFTLLGLRLPSRS 724 (746)
Q Consensus 677 ~i~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~ 724 (746)
...... ...+.+....+..|++.++. +||+..++...++.+.++.
T Consensus 229 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~---~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 229 QFYEDRHQLPAPKAAELANLINNCMDYEPD---HRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp HHHHTTCCCCCCSSCTTHHHHHHHSCSSGG---GSCCHHHHHHHHHTCC---
T ss_pred HHhhccCCCCCCCCHHHHHHHHHHcCCChh---HCcCHHHHHHHHHHhcCCC
Confidence 111111 11224455666666655443 2788888887777766543
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-34 Score=304.76 Aligned_cols=176 Identities=18% Similarity=0.254 Sum_probs=151.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhh-----hhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE-----ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~-----~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
.+.|+..+.||+|+||.||+ ||||++...... ..+.+.+|+++++.++|||||++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45789999999999999997 899998654321 3567999999999999999999999999999999
Q ss_pred chhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc---EEEccccc
Q 041467 545 FDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV---THVGDLGL 612 (746)
Q Consensus 545 lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~---~ki~DfGl 612 (746)
+||||+++|+|. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999984 22489999999999999999999999 9999999999999976554 99999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++...... ......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 180 a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 224 (351)
T 3c0i_A 180 AIQLGESG--------LVAGGRVGTPHFMAPEVVKREPYGK---PVDVWGCGVILF 224 (351)
T ss_dssp CEECCTTS--------CBCCCCCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred eeEecCCC--------eeecCCcCCcCccCHHHHcCCCCCc---hHhhHHHHHHHH
Confidence 98764321 1123467999999999998877654 599999999998
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=313.41 Aligned_cols=296 Identities=18% Similarity=0.174 Sum_probs=255.1
Q ss_pred CCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 4 n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
|.+..+|+..+..+++|++|+|++|.+++..|..|+.+++|++|+|++|.|++..|..|+++++|++|+|++|.+.+..+
T Consensus 61 ~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~ 140 (597)
T 3oja_B 61 STMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPR 140 (597)
T ss_dssp CEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCH
Confidence 33445555556678999999999999998888899999999999999999999888889999999999999999986666
Q ss_pred hhhcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCCccc--ccCCCCCcEeeCccCcccccCCccccCCCCCCE
Q 041467 84 TEICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLS--LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSW 157 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~--l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 157 (746)
..|+++++|++|++++|... ..|+++++|+.|+|++|.+.. +..+++|+.|++++|.+++ +...++|+.
T Consensus 141 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~ 215 (597)
T 3oja_B 141 GIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLST-----LAIPIAVEE 215 (597)
T ss_dssp TTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSE-----EECCTTCSE
T ss_pred HHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcccc-----ccCCchhhe
Confidence 66899999999999986543 468999999999999999965 4678999999999999985 345678999
Q ss_pred EEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCee
Q 041467 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWL 237 (746)
Q Consensus 158 L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L 237 (746)
|++++|.++.. +..+ .++|+.|+|++|.+++ +..+..++ +|+.|++++|.+++..|..|+++++|+.|
T Consensus 216 L~ls~n~l~~~-------~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 283 (597)
T 3oja_B 216 LDASHNSINVV-------RGPV--NVELTILKLQHNNLTD--TAWLLNYP-GLVEVDLSYNELEKIMYHPFVKMQRLERL 283 (597)
T ss_dssp EECCSSCCCEE-------ECSC--CSCCCEEECCSSCCCC--CGGGGGCT-TCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred eeccCCccccc-------cccc--CCCCCEEECCCCCCCC--ChhhccCC-CCCEEECCCCccCCCCHHHhcCccCCCEE
Confidence 99999999753 2222 3689999999999986 46788887 79999999999999999999999999999
Q ss_pred ecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCcccc
Q 041467 238 TMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTL 317 (746)
Q Consensus 238 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 317 (746)
+|++|++.+ +|..+..+++|+.|+|++|.++ .+|..++.+++|+.|+|++|+|++ +
T Consensus 284 ~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~----------------------~i~~~~~~l~~L~~L~L~~N~l~~-~ 339 (597)
T 3oja_B 284 YISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL----------------------HVERNQPQFDRLENLYLDHNSIVT-L 339 (597)
T ss_dssp ECTTSCCCE-EECSSSCCTTCCEEECCSSCCC----------------------CCGGGHHHHTTCSEEECCSSCCCC-C
T ss_pred ECCCCCCCC-CCcccccCCCCcEEECCCCCCC----------------------ccCcccccCCCCCEEECCCCCCCC-c
Confidence 999999986 5777888999999999999987 456677888999999999999985 4
Q ss_pred chhhhhcccccceEEccCccccccCc
Q 041467 318 PQQILSVTTLSLYLELDNNLLNGSLP 343 (746)
Q Consensus 318 p~~~~~l~~l~~~L~Ls~N~l~~~~p 343 (746)
| +..++.| ..|++++|++++..+
T Consensus 340 ~--~~~~~~L-~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 340 K--LSTHHTL-KNLTLSHNDWDCNSL 362 (597)
T ss_dssp C--CCTTCCC-SEEECCSSCEEHHHH
T ss_pred C--hhhcCCC-CEEEeeCCCCCChhH
Confidence 4 5667788 689999999987533
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=299.42 Aligned_cols=176 Identities=19% Similarity=0.274 Sum_probs=150.6
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5788999999999999997 8999986443 3334678899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+.++.+. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+|+......
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 155 (292)
T 3o0g_A 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--- 155 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC---
T ss_pred cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc---
Confidence 99865543 45789999999999999999999999 99999999999999999999999999998763221
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+... ++.++||||+||++|
T Consensus 156 -----~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 193 (292)
T 3o0g_A 156 -----RCYSAEVVTLWYRPPDVLFGAKL--YSTSIDMWSAGCIFA 193 (292)
T ss_dssp -----SCCCSCCSCGGGCCHHHHTTCSC--CCTHHHHHHHHHHHH
T ss_pred -----ccccCCccccCCcChHHHcCCCC--cCchHHHHHHHHHHH
Confidence 12234678999999999987652 234699999999998
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=316.45 Aligned_cols=176 Identities=23% Similarity=0.322 Sum_probs=153.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|...+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++|||||++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 46799999999999999996 9999986543 23456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+++|+|. ...+++.++..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 ~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~-- 169 (476)
T 2y94_A 95 MEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-- 169 (476)
T ss_dssp EECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT--
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc--
Confidence 9999999985 45689999999999999999999999 9999999999999999999999999999876321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+..+. +.++||||+||++|
T Consensus 170 -------~~~~~~~gt~~y~aPE~~~~~~~~--~~~~DiwSlGvil~ 207 (476)
T 2y94_A 170 -------EFLRTSCGSPNYAAPEVISGRLYA--GPEVDIWSSGVILY 207 (476)
T ss_dssp -------CCBCCCCSCSTTCCHHHHTTCCBC--SHHHHHHHHHHHHH
T ss_pred -------ccccccCCCcCeEChhhccCCCCC--CCcceehhhHHHHH
Confidence 122346799999999999887653 33699999999998
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-34 Score=305.41 Aligned_cols=176 Identities=24% Similarity=0.274 Sum_probs=153.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhh------hhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE------ASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~------~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
..+.|+..+.||+|+||.||+ ||||++...... ..+.+.+|+.++++++|||||++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 456799999999999999997 899998654321 24679999999999999999999999999999
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC----cEEEcccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV----VTHVGDLGLA 613 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~----~~ki~DfGla 613 (746)
.++||||+++|+|. ...+++.++..++.||+.|++|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 99999999999986 45689999999999999999999999 999999999999998776 7999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.+.... .....+||+.|+|||++.+..++. ++||||+||++|
T Consensus 167 ~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslGvil~ 209 (361)
T 2yab_A 167 HEIEDGV---------EFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVITY 209 (361)
T ss_dssp EECCTTC---------CCCCCCSCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred eEcCCCC---------ccccCCCCccEECchHHcCCCCCc---cccHHHHHHHHH
Confidence 8763321 123467999999999998877654 599999999998
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=309.20 Aligned_cols=215 Identities=24% Similarity=0.230 Sum_probs=162.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHH-hhcCCCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNA-LRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~-l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|..+ ++.++|||||++++++.+.+..|
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 346799999999999999997 8999986543 2334556778776 67899999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+||||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+|++||+|||+|+.....
T Consensus 116 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999985 45689999999999999999999999 9999999999999999999999999999864322
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccc-----------cccchhhc----ccc
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKK-----------QNKSILKS----AGI 684 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~-----------~~~~i~~~----~~~ 684 (746)
. ......+||+.|+|||++.+..++. ++||||+||++|..... ....+... .+.
T Consensus 193 ~--------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~ 261 (373)
T 2r5t_A 193 N--------STTSTFCGTPEYLAPEVLHKQPYDR---TVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN 261 (373)
T ss_dssp C--------CCCCSBSCCCCCCCHHHHTTCCCCT---HHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSS
T ss_pred C--------CccccccCCccccCHHHhCCCCCCc---hhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCC
Confidence 1 1233478999999999998877654 59999999999921111 11112221 112
Q ss_pred CCCccHHHHHHhhCCCCCCCCC
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+......+..|+..++.+||.
T Consensus 262 ~~~~~~~li~~lL~~dp~~R~~ 283 (373)
T 2r5t_A 262 ITNSARHLLEGLLQKDRTKRLG 283 (373)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTT
T ss_pred CCHHHHHHHHHHcccCHHhCCC
Confidence 2344566777777777776665
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=304.50 Aligned_cols=214 Identities=20% Similarity=0.218 Sum_probs=161.1
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhhh----hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLKQ----KEASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
.++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++|||||++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999995 8999886432 2334568899999999999999999999999999
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
.++||||+++|+|. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 99999999999885 45689999999999999999999999 99999999999999999999999999997642
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccc-----------cccchhhc----c
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKK-----------QNKSILKS----A 682 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~-----------~~~~i~~~----~ 682 (746)
... ......+||+.|+|||++.+..++. ++||||+||++|..... ....+... .
T Consensus 173 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p 241 (327)
T 3a62_A 173 HDG--------TVTHTFCGTIEYMAPEILMRSGHNR---AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP 241 (327)
T ss_dssp --------------CTTSSCCTTSCHHHHTTSCCCT---HHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC
T ss_pred cCC--------ccccccCCCcCccCHhhCcCCCCCC---cccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 211 1223467999999999998876654 59999999999821111 11112211 1
Q ss_pred ccCCCccHHHHHHhhCCCCCCCCC
Q 041467 683 GIKGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
+..+....+.+..|+..++..||.
T Consensus 242 ~~~~~~~~~li~~~L~~dp~~R~~ 265 (327)
T 3a62_A 242 PYLTQEARDLLKKLLKRNAASRLG 265 (327)
T ss_dssp TTSCHHHHHHHHHHSCSCGGGSTT
T ss_pred CCCCHHHHHHHHHHHhcCHhhccC
Confidence 122345567778888887777775
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-34 Score=308.41 Aligned_cols=175 Identities=19% Similarity=0.223 Sum_probs=152.5
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|+..+.||+|+||.||+ ||+|++..........+.+|++++++++|||||++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 46799999999999999997 899988655444556789999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC--CCCcEEEccccccccccCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD--QDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~--~~~~~ki~DfGla~~~~~~~~ 621 (746)
+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+||+++ .++.+||+|||+|+......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999985 23689999999999999999999999 999999999999997 45789999999998763221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+||+.|+|||++.+..++.+ +||||+||++|
T Consensus 206 --------~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwSlG~il~ 241 (387)
T 1kob_A 206 --------IVKVTTATAEFAAPEIVDREPVGFY---TDMWAIGVLGY 241 (387)
T ss_dssp --------CEEEECSSGGGCCHHHHTTCCBCHH---HHHHHHHHHHH
T ss_pred --------ceeeeccCCCccCchhccCCCCCCc---ccEeeHhHHHH
Confidence 1223579999999999988777655 99999999998
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=318.81 Aligned_cols=215 Identities=21% Similarity=0.193 Sum_probs=160.9
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|+++++.++|||||+++++|...+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 346799999999999999996 9999987542 3334568899999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRH-HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|+|. ...+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 226 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp EECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999985 4578999999999999999999998 7 9999999999999999999999999999864221
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhcc----cc
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSA----GI 684 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~----~~ 684 (746)
. ......+||+.|+|||++.+..++. ++||||+||++|...... ...+.... ..
T Consensus 303 ~--------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~ 371 (446)
T 4ejn_A 303 G--------ATMKTFCGTPEYLAPEVLEDNDYGR---AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT 371 (446)
T ss_dssp ------------CCSSSCGGGCCHHHHHTSCCCT---HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT
T ss_pred C--------cccccccCCccccCHhhcCCCCCCC---ccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCcc
Confidence 1 2233478999999999998887755 499999999998221110 11111111 11
Q ss_pred CCCccHHHHHHhhCCCCCCCCC
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+.+....+..|+..++..||.
T Consensus 372 ~~~~~~~li~~~L~~dP~~R~~ 393 (446)
T 4ejn_A 372 LGPEAKSLLSGLLKKDPKQRLG 393 (446)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTT
T ss_pred CCHHHHHHHHHHcccCHHHhCC
Confidence 2244566777777777776663
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=298.33 Aligned_cols=179 Identities=22% Similarity=0.297 Sum_probs=148.6
Q ss_pred hhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 477 KATNNFSPANKIREGGFNIVYN--------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 4567899999999999999997 8999986443 22346788999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||++++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+......
T Consensus 98 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 173 (311)
T 3niz_A 98 FEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPV- 173 (311)
T ss_dssp EECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-
T ss_pred EcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCc-
Confidence 9999854332 34589999999999999999999999 99999999999999999999999999998763221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+... ++.++||||+||++|
T Consensus 174 -------~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 211 (311)
T 3niz_A 174 -------RSYTHEVVTLWYRAPDVLMGSKK--YSTSVDIWSIGCIFA 211 (311)
T ss_dssp -------C---CCCCCCTTCCHHHHTTCCS--CCTHHHHHHHHHHHH
T ss_pred -------ccccCCcccCCcCCHHHhcCCCC--CCchHHhHHHHHHHH
Confidence 12233578999999999976432 234699999999998
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=317.09 Aligned_cols=185 Identities=23% Similarity=0.285 Sum_probs=138.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC-----C
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSI-----D 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~-----~ 541 (746)
..++|+..+.||+|+||.||+ ||||++... .....+++.+|++++++++|||||++++++... .
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 346899999999999999996 899988543 234456799999999999999999999999543 4
Q ss_pred cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 542 FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
..|+||||+. |++. ...+++.++..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+..
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred eEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 6899999875 5554 45689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCC-------------------cccccccccccccccccccccccc-cccccCCCccceeeccceeec
Q 041467 617 YGYEPGTT-------------------AETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFAL 669 (746)
Q Consensus 617 ~~~~~~~~-------------------~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~~ 669 (746)
........ .......+..+||++|||||++.. ..++ .++||||+||++|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~---~~~DiwSlG~il~e 276 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYT---EAIDVWSIGCIFAE 276 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCC---THHHHHHHHHHHHH
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCC---cHhHHHHHHHHHHH
Confidence 43221100 000123456789999999998754 4444 45999999999983
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=305.35 Aligned_cols=185 Identities=22% Similarity=0.262 Sum_probs=152.2
Q ss_pred hhhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc----ccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF----EGF 545 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~----~~l 545 (746)
-..++|+..+.||+|+||.||+ ||||++..... ....+.+|+.++++++|||||++++++..... .++
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 21 FQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp ETTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cchhhchhhheecccCceEEEEEEECCCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 3457899999999999999997 99999865432 33456779999999999999999999988554 589
Q ss_pred hhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhc-------CCCCeEEcCCCCCCeeeCCCCcEEEccccccc
Q 041467 546 DFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHH-------CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614 (746)
Q Consensus 546 v~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~-------~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~ 614 (746)
||||+++|+|. ...+++.++..++.|++.|++|||+. +.++|+||||||+||+++.++.+||+|||+|+
T Consensus 100 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence 99999999986 45699999999999999999999986 23489999999999999999999999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccc--cCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLE--NREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~--~~~~~~DiwSlG~i~~ 668 (746)
........ .......||+.|+|||++.+.... .++.++|||||||++|
T Consensus 180 ~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~ 229 (322)
T 3soc_A 180 KFEAGKSA------GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLW 229 (322)
T ss_dssp EECTTSCC------CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccCc------cccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHH
Confidence 76433221 122346799999999999873221 1234599999999999
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-34 Score=307.37 Aligned_cols=171 Identities=21% Similarity=0.229 Sum_probs=143.9
Q ss_pred CCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCC
Q 041467 483 SPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG 553 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g 553 (746)
...+.||+|+||.||+ ||||++........+.+.+|++++++++|||||++++++.+.+..++||||+++|
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 3467899999999997 8999987655556678999999999999999999999999999999999999999
Q ss_pred ccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee--CCCCcEEEccccccccccCCCCCCCc
Q 041467 554 QLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL--DQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 554 ~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl--~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++......
T Consensus 172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~----- 243 (373)
T 2x4f_A 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE----- 243 (373)
T ss_dssp EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-----
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-----
Confidence 885 34689999999999999999999999 99999999999999 677899999999998763321
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+||+.|+|||++.+..++. ++|||||||++|
T Consensus 244 ----~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 279 (373)
T 2x4f_A 244 ----KLKVNFGTPEFLAPEVVNYDFVSF---PTDMWSVGVIAY 279 (373)
T ss_dssp ----BCCCCCSSCTTCCHHHHTTCBCCH---HHHHHHHHHHHH
T ss_pred ----ccccccCCCcEeChhhccCCCCCc---HHhHHHHHHHHH
Confidence 122357999999999998776655 499999999998
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=301.35 Aligned_cols=179 Identities=22% Similarity=0.309 Sum_probs=148.6
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~ 543 (746)
.++|+..+.||+|+||.||+ ||||++........+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46788999999999999985 899998766566667899999999999999999999998664 458
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 8999999999986 33589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ........||..|+|||++.+..++.+ +||||+||++|
T Consensus 166 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 208 (295)
T 3ugc_A 166 QDKEF-----FKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLY 208 (295)
T ss_dssp ---------------CTTCGGGGCCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred CCcce-----eeeccCCCCccceeCcHHhcCCCCChH---HHHHHHHHHHH
Confidence 33211 111223557888999999988877654 99999999998
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=312.09 Aligned_cols=230 Identities=18% Similarity=0.207 Sum_probs=174.1
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||+++++|...+..++|
T Consensus 111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 3456788899999999999997 9999886432 23345688999999999999999999999999999999
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+......
T Consensus 191 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 9999999985 34689999999999999999999999 99999999999999999999999999998643211
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc--cc---------ccchhhc--cccCCC
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQ---------NKSILKS--AGIKGK 687 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~---------~~~i~~~--~~~~~~ 687 (746)
. ........++..|+|||++.+..++.+ +|||||||++|.... .. ....... ......
T Consensus 268 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~---~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 338 (377)
T 3cbl_A 268 Y------AASGGLRQVPVKWTAPEALNYGRYSSE---SDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPE 338 (377)
T ss_dssp E------ECCSSCCEEEGGGSCHHHHHHCEEEHH---HHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCT
T ss_pred e------eecCCCCCCCcCcCCHhHhccCCCCch---hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence 0 011112346788999999988777655 999999999982211 10 0011111 111122
Q ss_pred ccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 688 KTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.+.+.+..++..|+...|. ||++.++...++
T Consensus 339 ~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 339 LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 3445566666666666676 888877665444
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=310.06 Aligned_cols=185 Identities=21% Similarity=0.303 Sum_probs=141.2
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCC--c
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIR-HRNLIKIITICSSID--F 542 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~--~ 542 (746)
...++|+..+.||+|+||.||+ ||||++... .....+++.+|+.+++++. |||||++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3457899999999999999997 899988533 2344567889999999997 999999999997654 6
Q ss_pred ccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 543 EGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 543 ~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
.|+|||||. |++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 161 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred EEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence 799999997 4554 45789999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCC-------------ccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 619 YEPGTT-------------AETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~-------------~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ..........+||++|+|||++.+. .+ +.++||||+||++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~~DiwSlG~il~ 222 (388)
T 3oz6_A 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKY---TKGIDMWSLGCILG 222 (388)
T ss_dssp CCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCC---CTHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCC---CChhhHHHHHHHHH
Confidence 211100 0111223457899999999999874 34 44699999999998
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=291.36 Aligned_cols=231 Identities=19% Similarity=0.252 Sum_probs=177.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
..++|+..+.||+|+||.||+ ||||++.... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 356788999999999999996 8999986443 2345689999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-- 159 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-- 159 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE--
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhh--
Confidence 9999886 34589999999999999999999999 999999999999999999999999999987533211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-cc----------chhhc-cccCCCccH
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-NK----------SILKS-AGIKGKKTV 690 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~~----------~i~~~-~~~~~~~~~ 690 (746)
.......||+.|+|||++.+..++.+ +||||+||++|.... .. .. .+... .........
T Consensus 160 -----~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (268)
T 3sxs_A 160 -----VSSVGTKFPVKWSAPEVFHYFKYSSK---SDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLAS 231 (268)
T ss_dssp -----EECCSCCCCGGGCCHHHHHHSEEETT---HHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSC
T ss_pred -----hcccCCCcCcccCCHHHHhccCCchh---hhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcCh
Confidence 12234567888999999988777655 999999999983221 11 00 01111 111122234
Q ss_pred HHHHHhhCCCCCCCCC-CCCccchhhhcccCCC
Q 041467 691 SFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPS 722 (746)
Q Consensus 691 ~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~ 722 (746)
+.+..++..|+...|. ||+..++...++.+-.
T Consensus 232 ~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 232 DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp HHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 4555666666666666 8888877766665543
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=306.04 Aligned_cols=177 Identities=22% Similarity=0.332 Sum_probs=151.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--------hhhHHHHHHHHHhhcCCCCceeeEEEEEecC
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQK--------EASRSFAAEFNALRNIRHRNLIKIITICSSI 540 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--------~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~ 540 (746)
..++|+..+.||+|+||.||+ ||||++..... ...+.+.+|++++++++|||||++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 456899999999999999997 89998865421 1234578899999999999999999999999
Q ss_pred CcccchhhhccCC-ccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccc
Q 041467 541 DFEGFDFKAISNG-QLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614 (746)
Q Consensus 541 ~~~~lv~e~~~~g-~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~ 614 (746)
+..++||||+..| ++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 9999999999777 664 44689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... .....+||+.|+|||++.+..+. +.++||||+||++|
T Consensus 179 ~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~--~~~~DiwslG~il~ 221 (335)
T 3dls_A 179 YLERGK---------LFYTFCGTIEYCAPEVLMGNPYR--GPELEMWSLGVTLY 221 (335)
T ss_dssp ECCTTC---------CBCEECSCGGGCCHHHHTTCCBC--SHHHHHHHHHHHHH
T ss_pred ECCCCC---------ceeccCCCccccChhhhcCCCCC--CCcccchhHHHHHH
Confidence 763321 12346799999999999887662 33599999999998
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=299.90 Aligned_cols=175 Identities=22% Similarity=0.263 Sum_probs=152.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh------hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQK------EASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~------~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.+.|+..+.||+|+||.||+ ||||++..... ...+.+.+|++++++++|||||++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 45688999999999999997 89998864422 1356799999999999999999999999999999
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC----cEEEccccccc
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV----VTHVGDLGLAK 614 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~----~~ki~DfGla~ 614 (746)
++||||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999986 45689999999999999999999999 999999999999998877 89999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ......||+.|+|||++.+..++. ++||||+||++|
T Consensus 167 ~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 208 (326)
T 2y0a_A 167 KIDFGN---------EFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVITY 208 (326)
T ss_dssp ECCTTS---------CCCCCCSCTTTCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred ECCCCC---------ccccccCCcCcCCceeecCCCCCc---HHHHHHHHHHHH
Confidence 763221 123367999999999998777654 599999999998
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-34 Score=302.37 Aligned_cols=185 Identities=25% Similarity=0.395 Sum_probs=148.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC------
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID------ 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------ 541 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||+++++|.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 456789999999999999996 8999986433 334567999999999999999999999986543
Q ss_pred ---------------------------------------------------cccchhhhccCCccc--------ccCCCH
Q 041467 542 ---------------------------------------------------FEGFDFKAISNGQLR--------LCNLSL 562 (746)
Q Consensus 542 ---------------------------------------------------~~~lv~e~~~~g~l~--------~~~l~~ 562 (746)
..++||||+++|++. ....++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 278999999999986 234566
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc----ccccccccccccc
Q 041467 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA----ETASSSIGINGTV 638 (746)
Q Consensus 563 ~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~----~~~~~~~~~~gt~ 638 (746)
..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........... .........+||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 77999999999999999999 9999999999999999999999999999887543221100 0011233467999
Q ss_pred cccccccccccccccCCCccceeeccceee
Q 041467 639 GYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 639 ~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.|+|||++.+..++. ++||||+||++|
T Consensus 241 ~y~aPE~~~~~~~~~---~~Di~slG~il~ 267 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSH---KVDIFSLGLILF 267 (332)
T ss_dssp GGSCHHHHHCCCCCT---HHHHHHHHHHHH
T ss_pred CccChHHhcCCCCcc---hhhHHHHHHHHH
Confidence 999999998877655 599999999998
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=294.91 Aligned_cols=190 Identities=31% Similarity=0.471 Sum_probs=161.1
Q ss_pred cCCcccHHHHhhhhcCCCCC------CeEeecCCeeEEE-------EEeehhhhh----hhhhhHHHHHHHHHhhcCCCC
Q 041467 466 QFPMISHAELSKATNNFSPA------NKIREGGFNIVYN-------VAMKVANLK----QKEASRSFAAEFNALRNIRHR 528 (746)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~------~~ig~g~~g~v~~-------vavK~~~~~----~~~~~~~~~~E~~~l~~l~Hp 528 (746)
....++..++..++.+|... +.||+|+||.||+ ||||++... .....+.+.+|++++++++||
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 34567888999999888776 9999999999997 899987542 233456799999999999999
Q ss_pred ceeeEEEEEecCCcccchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC
Q 041467 529 NLIKIITICSSIDFEGFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD 600 (746)
Q Consensus 529 nIv~l~~~~~~~~~~~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~ 600 (746)
||+++++++.+.+..++||||+++|++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEc
Confidence 9999999999999999999999999885 23589999999999999999999999 999999999999999
Q ss_pred CCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 601 QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 601 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.++.+||+|||+++....... ........||+.|+|||++.+. + +.++||||+||++|
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~g~~~y~aPE~~~~~-~---~~~~Dv~slG~il~ 225 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQ------TVMTSRIVGTTAYMAPEALRGE-I---TPKSDIYSFGVVLL 225 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSS------CEECSSCCSCGGGCCHHHHTTE-E---CTHHHHHHHHHHHH
T ss_pred CCCcEEEeecccccccccccc------cccccccCCCcCcCChHHhcCC-C---CccchhHHHHHHHH
Confidence 999999999999987543221 1112336799999999998754 4 44699999999998
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=315.37 Aligned_cols=176 Identities=22% Similarity=0.318 Sum_probs=153.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 46788999999999999996 8999986543 23456789999999999999999999999999999999
Q ss_pred hhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 547 FKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 547 ~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
|||+++|+|. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999985 23589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .....+||+.|||||++.+..++. ++||||+||++|
T Consensus 341 ~~~~--------~~~~~~GT~~Y~APE~l~~~~~~~---~~DiwSlGvily 380 (543)
T 3c4z_A 341 AGQT--------KTKGYAGTPGFMAPELLLGEEYDF---SVDYFALGVTLY 380 (543)
T ss_dssp TTCC--------CBCCCCSCTTTSCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred CCCc--------ccccccCCccccChhhhcCCCCCh---HHhcCcchHHHH
Confidence 3211 123468999999999999877754 599999999999
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-34 Score=312.74 Aligned_cols=184 Identities=23% Similarity=0.283 Sum_probs=146.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC-----C
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSI-----D 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~-----~ 541 (746)
..++|+..+.||+|+||.||+ ||||++... .....+++.+|++++++++|||||++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 357899999999999999997 899998643 234456799999999999999999999999876 4
Q ss_pred cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 542 FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
..|+||||+. |+|. ...+++.++..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 6899999986 4664 34689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCC--------------ccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 617 YGYEPGTT--------------AETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~--------------~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
........ ..........+||++|+|||++... .+ +.++||||+||++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~---~~~~DiwSlG~il~ 243 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENY---TKSIDIWSTGCIFA 243 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCC---CTHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCC---CcccccchHHHHHH
Confidence 43321100 0001223568899999999997544 34 44699999999998
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.5e-34 Score=308.94 Aligned_cols=229 Identities=17% Similarity=0.198 Sum_probs=173.3
Q ss_pred hcCCCCCCeEeecCCeeEEE--------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.++|+..+.||+|+||.||+ ||||++... .......+.+|+.++++++|||||++++++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 45788899999999999995 899988543 234455789999999999999999999999999999
Q ss_pred cchhhhccCCccc------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC---cEEEc
Q 041467 544 GFDFKAISNGQLR------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV---VTHVG 608 (746)
Q Consensus 544 ~lv~e~~~~g~l~------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~---~~ki~ 608 (746)
++||||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 9999999999985 13589999999999999999999999 999999999999999554 59999
Q ss_pred cccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccc---
Q 041467 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKS--- 677 (746)
Q Consensus 609 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~--- 677 (746)
|||+|+.+...... .......||+.|+|||++.+..++.+ +|||||||++|.... .. ...
T Consensus 227 DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~---~DvwslG~il~ellt~g~~pf~~~~~~~~~~ 297 (367)
T 3l9p_A 227 DFGMARDIYRAGYY------RKGGCAMLPVKWMPPEAFMEGIFTSK---TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 297 (367)
T ss_dssp CCHHHHHHHHHSSC------TTCCGGGSCGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred CCcccccccccccc------ccCCCcCCcccEECHHHhcCCCCCcH---HHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999865332211 11223568999999999988877655 999999999983221 10 001
Q ss_pred -hhh-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 678 -ILK-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 678 -i~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
+.. ....+.....+.+..++..|+...|. ||+..++...++.
T Consensus 298 ~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 298 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 111 11122234445555666666666666 8888866655443
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-33 Score=316.47 Aligned_cols=176 Identities=24% Similarity=0.322 Sum_probs=153.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++|||||++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 346789999999999999997 8999986542 2345668899999999999999999999999999999
Q ss_pred hhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 546 DFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 546 v~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
||||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+..
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 99999999985 22489999999999999999999999 999999999999999999999999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 339 ~---------~~~~~~~GT~~Y~APEvl~~~~~~~---~~DiwSLGvily 376 (576)
T 2acx_A 339 G---------QTIKGRVGTVGYMAPEVVKNERYTF---SPDWWALGCLLY 376 (576)
T ss_dssp T---------CCEECCCSCGGGCCHHHHTTCEESS---HHHHHHHHHHHH
T ss_pred C---------ccccccCCCccccCHHHHcCCCCCc---cchHHHHHHHHH
Confidence 2 1123468999999999998877654 599999999999
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=6.9e-34 Score=304.04 Aligned_cols=238 Identities=21% Similarity=0.271 Sum_probs=181.4
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEec
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSS 539 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~ 539 (746)
+....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 344567899999999999999996 7899886542 3345679999999999999999999999999
Q ss_pred CCcccchhhhccCCccc----c-------------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEc
Q 041467 540 IDFEGFDFKAISNGQLR----L-------------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHG 590 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~----~-------------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHr 590 (746)
.+..++||||+++|+|. . ..+++.++..++.||+.||+|||++ +|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 99999999999999885 1 4689999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecc
Q 041467 591 DLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALN 670 (746)
Q Consensus 591 Dlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~ 670 (746)
||||+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.+ +|||||||++|..
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~el 269 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADY------YKADGNDAIPIRWMPPESIFYNRYTTE---SDVWAYGVVLWEI 269 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGC------BC----CCBCGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHH
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCcc------ccccCCCcccceecChhhhccCCcCcc---cccHHHHHHHHHH
Confidence 9999999999999999999999987633211 111223568999999999988776554 9999999999832
Q ss_pred cc-cc-c------cch----hh-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCCCC
Q 041467 671 EK-KQ-N------KSI----LK-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPSRS 724 (746)
Q Consensus 671 ~~-~~-~------~~i----~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~~~ 724 (746)
.. .. . ..+ .. ..........+.+..++..|+...|. ||+..++...++++....
T Consensus 270 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 270 FSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp HTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred HhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 21 11 0 011 11 11112233445556666666666676 888888887777766544
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.98 E-value=6.2e-34 Score=306.11 Aligned_cols=176 Identities=20% Similarity=0.260 Sum_probs=144.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..++|+..+.||+|+||.||+ ||||++.... ...+.+.+|+.+++.++|||||++++++.+.+..++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 456899999999999999996 8999986432 234568899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc--EEEccccccccccCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV--THVGDLGLAKFLYGYEP 621 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~--~ki~DfGla~~~~~~~~ 621 (746)
|+++|+|. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+|+.....
T Consensus 97 ~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-- 171 (361)
T 3uc3_A 97 YASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-- 171 (361)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--
Confidence 99999986 45799999999999999999999999 9999999999999987665 999999999753211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+..++.+ ++||||+||++|
T Consensus 172 -------~~~~~~~gt~~y~aPE~~~~~~~~~~--~~DiwslG~il~ 209 (361)
T 3uc3_A 172 -------SQPKSTVGTPAYIAPEVLLRQEYDGK--IADVWSCGVTLY 209 (361)
T ss_dssp ----------------CTTSCHHHHHCSSCCHH--HHHHHHHHHHHH
T ss_pred -------CCCCCCcCCCCcCChhhhcCCCCCCC--eeeeehhHHHHH
Confidence 11234679999999999988776433 589999999998
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=6e-34 Score=293.53 Aligned_cols=176 Identities=21% Similarity=0.357 Sum_probs=151.9
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.++|+..+.||+|+||.||+ ||||++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 46788999999999999997 8999986442 23457999999999999999999999999999999999999
Q ss_pred cCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 551 SNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 551 ~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~----- 159 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD----- 159 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH-----
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc-----
Confidence 999886 34589999999999999999999999 9999999999999999999999999999865321
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.........||+.|+|||++.+..++.+ +||||+||++|
T Consensus 160 --~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 198 (269)
T 4hcu_A 160 --QYTSSTGTKFPVKWASPEVFSFSRYSSK---SDVWSFGVLMW 198 (269)
T ss_dssp --HHHSTTSTTCCGGGCCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred --ccccccCcccccccCCHHHhcCCCCCch---hhhHHHHHHHH
Confidence 1122334567889999999988777655 99999999998
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=2.1e-33 Score=291.19 Aligned_cols=175 Identities=20% Similarity=0.315 Sum_probs=150.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 457899999999999999996 8999885432 2335678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~- 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 162 (279)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc-
Confidence 99999999885 45789999999999999999999999 9999999999999999999999999998654221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 163 ---------~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 198 (279)
T 3fdn_A 163 ---------RRTDLCGTLDYLPPEMIEGRMHDEK---VDLWSLGVLCY 198 (279)
T ss_dssp --------------CCCCTTCCHHHHTTCCCCTT---HHHHHHHHHHH
T ss_pred ---------cccccCCCCCccCHhHhccCCCCcc---chhHhHHHHHH
Confidence 1223678999999999988776554 99999999998
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.98 E-value=9.2e-34 Score=314.54 Aligned_cols=234 Identities=17% Similarity=0.245 Sum_probs=180.9
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
+....++|+..+.||+|+||.||+ ||||+++... ...+.|.+|+++|++++|||||++++++. .+..++|
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 344567888999999999999997 9999986543 34678999999999999999999999986 5678999
Q ss_pred hhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 547 FKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 547 ~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
|||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 9999999986 23688999999999999999999999 9999999999999999999999999999876321
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c------cc----hhhc-cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N------KS----ILKS-AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~------~~----i~~~-~~~~~ 686 (746)
. ........+|..|+|||++....++.+ +|||||||++|.... .. . .. +... .....
T Consensus 338 ~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~---~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~ 407 (454)
T 1qcf_A 338 E-------YTAREGAKFPIKWTAPEAINFGSFTIK---SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRP 407 (454)
T ss_dssp H-------HHTTCSSSSCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCC
T ss_pred c-------eeccCCCcccccccCHHHhccCCCCcH---HHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 1 111223456889999999987777554 999999999982221 11 0 01 1111 11122
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPSR 723 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~~ 723 (746)
..+.+.+..++..|+...|. ||++.++...++.+...
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 34456667777777777777 99999888777766543
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-33 Score=301.61 Aligned_cols=174 Identities=23% Similarity=0.287 Sum_probs=148.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
...|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++|||||++++++...+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 34588899999999999996 899998643 233456789999999999999999999999999999999
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||+.+ ++. ...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 133 ~e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-- 206 (348)
T 1u5q_A 133 MEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-- 206 (348)
T ss_dssp EECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--
T ss_pred EecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC--
Confidence 999974 442 45789999999999999999999999 999999999999999999999999999976522
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+||+.|+|||++.+.....++.++|||||||++|
T Consensus 207 ----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ 244 (348)
T 1u5q_A 207 ----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 244 (348)
T ss_dssp ----------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHH
T ss_pred ----------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHH
Confidence 12367999999999996432233455699999999998
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=8e-34 Score=301.37 Aligned_cols=227 Identities=19% Similarity=0.207 Sum_probs=167.8
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
.++|+..+.||+|+||.||+ ||+|.+.... ....+.+.+|++++++++|||||+++++|.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 35788999999999999996 4788775432 344578999999999999999999999998754 77
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+++||+.+|++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 899999999985 35689999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc----------ccchhhc--cccC
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ----------NKSILKS--AGIK 685 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~----------~~~i~~~--~~~~ 685 (746)
.... .......||..|+|||++.+..++.+ +|||||||++|.... .. ...+... ....
T Consensus 170 ~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T 3poz_A 170 EEKE------YHAEGGKVPIKWMALESILHRIYTHQ---SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240 (327)
T ss_dssp TCC-------------CCCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC
T ss_pred Cccc------ccccCCCccccccChHHhccCCCCch---hhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCC
Confidence 3221 12233567889999999998877655 999999999983221 11 0111111 1112
Q ss_pred CCccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 686 GKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.......+..++..|+...|. ||++.++...+.
T Consensus 241 ~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 241 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 223444555566666666666 888886654443
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=9.8e-34 Score=298.53 Aligned_cols=179 Identities=18% Similarity=0.280 Sum_probs=145.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc---
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE--- 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~--- 543 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46799999999999999996 8999986542 33456789999999999999999999998876654
Q ss_pred -cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 -GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 -~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|+|. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 9999999999986 45689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ........||+.|+|||++.+..++.+ +||||+||++|
T Consensus 168 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 210 (311)
T 3ork_A 168 DSGNS-----VTQTAAVIGTAQYLSPEQARGDSVDAR---SDVYSLGCVLY 210 (311)
T ss_dssp -------------------CCTTCCHHHHHTCCCCHH---HHHHHHHHHHH
T ss_pred ccccc-----cccccccCcCcccCCHHHhcCCCCCch---HhHHHHHHHHH
Confidence 32211 112234679999999999988877554 99999999998
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=8.2e-34 Score=297.54 Aligned_cols=181 Identities=22% Similarity=0.269 Sum_probs=146.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhc--CCCCceeeEEEEEecC----Cccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRN--IRHRNLIKIITICSSI----DFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~~~~~~~----~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++... ..+.+.+|.+++.. ++||||+++++++... ...+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 346899999999999999997 999998643 33445666666665 8999999999987653 3578
Q ss_pred chhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEcCCCCCCeeeCCCCcEEEccccc
Q 041467 545 FDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLR--------HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612 (746)
Q Consensus 545 lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH--------~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGl 612 (746)
+||||+++|+|. ...+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||+
T Consensus 83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 999999999986 467899999999999999999999 66 999999999999999999999999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccc---cCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLE---NREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~---~~~~~~DiwSlG~i~~ 668 (746)
|+........ .........||+.|+|||++.+.... .+++++|||||||++|
T Consensus 160 a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~ 214 (301)
T 3q4u_A 160 AVMHSQSTNQ----LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214 (301)
T ss_dssp CEEEETTTTE----EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred eeeccccccc----ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHH
Confidence 9876433221 11112335799999999999876322 1234699999999998
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7.1e-34 Score=305.97 Aligned_cols=187 Identities=22% Similarity=0.284 Sum_probs=156.2
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeE
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKI 533 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l 533 (746)
+...++....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 44556667788999999999999999996 7999986542 33456799999999999 79999999
Q ss_pred EEEEecCCc-ccchhhhccCCccc-----cc-------------------------------------------------
Q 041467 534 ITICSSIDF-EGFDFKAISNGQLR-----LC------------------------------------------------- 558 (746)
Q Consensus 534 ~~~~~~~~~-~~lv~e~~~~g~l~-----~~------------------------------------------------- 558 (746)
+++|.+.+. .++||||+++|+|. ..
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999988654 88999999998885 11
Q ss_pred -----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 559 -----------------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 559 -----------------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
.+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 189999999999999999999999 999999999999999999999999999987643221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
........||+.|+|||++.+..++.+ +|||||||++|
T Consensus 249 ------~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~ 286 (359)
T 3vhe_A 249 ------YVRKGDARLPLKWMAPETIFDRVYTIQ---SDVWSFGVLLW 286 (359)
T ss_dssp ------CEEC--CEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred ------chhccccCCCceeEChhhhcCCCCCch---hhhhhHHHHHH
Confidence 122334678999999999988777654 99999999998
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-32 Score=289.64 Aligned_cols=251 Identities=25% Similarity=0.406 Sum_probs=174.3
Q ss_pred CCcEeeCccCcccc--cCCccccCCCCCCEEEccC-CCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhc
Q 041467 130 SLEMIEFSRNQFSG--GVSVDFSRLKNLSWLNLGV-NNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANL 206 (746)
Q Consensus 130 ~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 206 (746)
+++.|+|++|.+++ .+|..|+.+++|++|+|++ |.+.+ .+|..|.++++|++|+|++|++++.+|..+..+
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~------~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l 124 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVG------PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI 124 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEES------CCCGGGGGCTTCSEEEEEEECCEEECCGGGGGC
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccc------cCChhHhcCCCCCEEECcCCeeCCcCCHHHhCC
Confidence 45555566666655 5555666666666666663 55554 344455556666666666666655566656555
Q ss_pred ccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCC-CCceeeccccccccccccccccc--ChHH
Q 041467 207 SSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETP-NLQLLNIGGNHLQGSILSSLGNL--TLQT 283 (746)
Q Consensus 207 ~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~l~~l--~~l~ 283 (746)
. +|++|++++|++++.+|..|+++++|++|+|++|++.+.+|..++.++ +|++|+|++|++++.+|..+..+ +.++
T Consensus 125 ~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~ 203 (313)
T 1ogq_A 125 K-TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVD 203 (313)
T ss_dssp T-TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEE
T ss_pred C-CCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEE
Confidence 5 466666666666655666666666666666666666655666666555 56666666666665555554443 2333
Q ss_pred hhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCC
Q 041467 284 YLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPEN 363 (746)
Q Consensus 284 ~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~ 363 (746)
+.+|.+.+.+|..|..+++|+.|+|++|++++.+|. +..+++| ++|++++|++++.+|.++..
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L-~~L~Ls~N~l~~~~p~~l~~--------------- 266 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNL-NGLDLRNNRIYGTLPQGLTQ--------------- 266 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTC-CEEECCSSCCEECCCGGGGG---------------
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCC-CEEECcCCcccCcCChHHhc---------------
Confidence 335566667788889999999999999999976665 7788888 68999999999989988765
Q ss_pred CCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCCcCCC
Q 041467 364 LSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGG 404 (746)
Q Consensus 364 l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~ 404 (746)
++.|+.|++++|+++|.+|....+..+..+++.+|+++||.
T Consensus 267 l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 267 LKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred CcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCC
Confidence 45668899999999999998877888899999999999996
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.98 E-value=2.6e-33 Score=291.90 Aligned_cols=175 Identities=21% Similarity=0.332 Sum_probs=145.5
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5788999999999999997 8999886432 23346788999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+.+ ++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--- 154 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc---
Confidence 975 443 35689999999999999999999999 99999999999999999999999999998753211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+... ++.++||||+||++|
T Consensus 155 -----~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 192 (288)
T 1ob3_A 155 -----RKYTHEIVTLWYRAPDVLMGSKK--YSTTIDIWSVGCIFA 192 (288)
T ss_dssp ------------CCCTTCCHHHHTTCCS--CCTHHHHHHHHHHHH
T ss_pred -----cccccccccccccCchheeCCCC--CCcHHHHHHHHHHHH
Confidence 11233578999999999976432 244699999999998
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-33 Score=290.00 Aligned_cols=175 Identities=21% Similarity=0.216 Sum_probs=153.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..++|+..+.||+|+||.||+ ||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 346789999999999999996 79999876655567789999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee---CCCCcEEEccccccccccCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DfGla~~~~~~~ 620 (746)
|+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||++.......
T Consensus 87 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 87 LCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred ccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99999885 45689999999999999999999999 99999999999999 788999999999998753221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+. + +.++||||+||++|
T Consensus 164 ---------~~~~~~~t~~y~aPE~~~~~-~---~~~~Di~slG~~l~ 198 (277)
T 3f3z_A 164 ---------MMRTKVGTPYYVSPQVLEGL-Y---GPECDEWSAGVMMY 198 (277)
T ss_dssp ---------CBCCCCSCTTTCCHHHHTTC-B---CTTHHHHHHHHHHH
T ss_pred ---------chhccCCCCCccChHHhccc-C---CchhhehhHHHHHH
Confidence 12336799999999998754 4 44599999999998
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-33 Score=296.65 Aligned_cols=172 Identities=19% Similarity=0.235 Sum_probs=141.3
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||+||+ ||||++... .......+.+|+..+.++ +|||||+++++|.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 5799999999999999997 899987543 223334455666665555 8999999999999999999999
Q ss_pred hhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 548 KAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 548 e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||+ +|++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 55554 34699999999999999999999999 99999999999999999999999999998753221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+ .+ +.++|||||||++|
T Consensus 212 --------~~~~~~gt~~y~aPE~~~~-~~---~~~~DiwslG~il~ 246 (311)
T 3p1a_A 212 --------AGEVQEGDPRYMAPELLQG-SY---GTAADVFSLGLTIL 246 (311)
T ss_dssp -----------CCCCCGGGCCGGGGGT-CC---STHHHHHHHHHHHH
T ss_pred --------CCcccCCCccccCHhHhcC-CC---CchhhHHHHHHHHH
Confidence 1223569999999999876 34 44699999999988
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=7.9e-34 Score=306.29 Aligned_cols=178 Identities=16% Similarity=0.195 Sum_probs=151.6
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhhhhhhHHHHHHHHHhhcCC---CCceeeEEEEEe
Q 041467 476 SKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASRSFAAEFNALRNIR---HRNLIKIITICS 538 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~~~~~ 538 (746)
....++|...+.||+|+||.||+ ||||++... ....+.+|+++++.++ ||||+++++++.
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 34457799999999999999996 689988643 3446777888877776 999999999999
Q ss_pred cCCcccchhhhccCCccc----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-------
Q 041467 539 SIDFEGFDFKAISNGQLR----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ------- 601 (746)
Q Consensus 539 ~~~~~~lv~e~~~~g~l~----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~------- 601 (746)
..+..++||||+++|+|. ...+++.++..++.||+.||+|||+. +||||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccc
Confidence 999999999999999985 24689999999999999999999999 9999999999999998
Q ss_pred ----CCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 602 ----DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 602 ----~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++.+||+|||+|+.+..... .......+||++|||||++.+..++. ++|||||||++|
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 276 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPK------GTIFTAKCETSGFQCVEMLSNKPWNY---QIDYFGVAATVY 276 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCT------TEEECCSSCTTSCCCHHHHTTCCBST---HHHHHHHHHHHH
T ss_pred cccccCCEEEeeCchhhhhhccCC------CceeeeecCCCCCCChHHhcCCCCCc---cccHHHHHHHHH
Confidence 89999999999976542221 12234578999999999999887654 599999999999
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-33 Score=305.14 Aligned_cols=231 Identities=22% Similarity=0.258 Sum_probs=177.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE----------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEec
Q 041467 478 ATNNFSPANKIREGGFNIVYN----------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSS 539 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~----------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~ 539 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +|||||+++++|..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 346788999999999999994 7999886542 34456799999999999 89999999999999
Q ss_pred CCcccchhhhccCCccc-----c----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCee
Q 041467 540 IDFEGFDFKAISNGQLR-----L----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~-----~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NIL 598 (746)
.+..++||||+++|+|. . ..+++.++..++.|++.||+|||+. +|+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 99999999999999985 1 2489999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc---
Q 041467 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ--- 674 (746)
Q Consensus 599 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~--- 674 (746)
++.++.+||+|||+|+........ .......||+.|+|||++.+..++.+ +|||||||++|.... ..
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~---~DiwslG~il~ellt~g~~p~ 294 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYY------KKTTNGRLPVKWMAPEALFDRIYTHQ---SDVWSFGVLLWEIFTLGGSPY 294 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTT------CCCTTCCCGGGGSCHHHHHSCCCCHH---HHHHHHHHHHHHHHTTSCCSS
T ss_pred EcCCCcEEEcccCccccccccccc------ccccCCCCCcceeCHHHhcCCCCCch---hHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999876432211 12233567899999999988777655 999999999982211 10
Q ss_pred ----ccch---hhc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 675 ----NKSI---LKS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 675 ----~~~i---~~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
...+ ... .........+.+..++..|+...|+ ||++.++...++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 295 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp TTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0011 111 1111233445555666666666666 88888777666553
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-33 Score=301.85 Aligned_cols=220 Identities=21% Similarity=0.234 Sum_probs=156.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..++|+..+.||+|+||.||+ ||||++.... ..+.+.+|++++++++|||||+++++|...+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 456799999999999999997 8999986432 34568899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEccccccccccCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DfGla~~~~~~~ 620 (746)
|+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204 (349)
T ss_dssp CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc-
Confidence 99999985 45689999999999999999999999 9999999999999975 899999999999875321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc------------ccchhhccc-cC--
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ------------NKSILKSAG-IK-- 685 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~------------~~~i~~~~~-~~-- 685 (746)
......+||+.|+|||++.+..++. ++|||||||++|...... ...+..... .+
T Consensus 205 --------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~ 273 (349)
T 2w4o_A 205 --------VLMKTVCGTPGYCAPEILRGCAYGP---EVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISP 273 (349)
T ss_dssp ----------------CGGGSCHHHHTTCCCCT---HHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTT
T ss_pred --------cccccccCCCCccCHHHhcCCCCCc---ccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCc
Confidence 1123467999999999998877654 599999999998211110 011111111 00
Q ss_pred -CCccHHHHHHhhCCCCCCCCC-CCCccchh
Q 041467 686 -GKKTVSFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 686 -~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
.......+..++..|....|+ ||+..++.
T Consensus 274 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 304 (349)
T 2w4o_A 274 WWDEVSLNAKDLVRKLIVLDPKKRLTTFQAL 304 (349)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred hhhhCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 123344556666666666666 77777544
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=8.3e-34 Score=292.57 Aligned_cols=225 Identities=16% Similarity=0.210 Sum_probs=172.0
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~~lv~ 547 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 46788999999999999997 8999986542 34456799999999999999999999999887 6789999
Q ss_pred hhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 548 KAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS--IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 548 e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
||+++|+|. ...+++.++..++.|++.|++|||+. + |+||||||+||+++.++.+||+|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~- 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ- 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeec-
Confidence 999999986 12489999999999999999999998 7 9999999999999999999999998875421
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhc--cccC
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKS--AGIK 685 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~--~~~~ 685 (746)
.....||+.|+|||++.+..++.++.++||||+||++|...... ...+... .+..
T Consensus 165 ------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 232 (271)
T 3kmu_A 165 ------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI 232 (271)
T ss_dssp ------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCC
T ss_pred ------------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCC
Confidence 11256899999999999877666555799999999998221111 0011111 1111
Q ss_pred CCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 686 GKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
.....+.+..++..|+...|. ||+..++...++.
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~ 267 (271)
T 3kmu_A 233 PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267 (271)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 223344455555555556666 7777766655444
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-33 Score=294.03 Aligned_cols=182 Identities=24% Similarity=0.379 Sum_probs=139.8
Q ss_pred hhhcCCCCCCeEeecCCeeEEE------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 477 KATNNFSPANKIREGGFNIVYN------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++ .....++|||
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred cCccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 3456899999999999999997 8999886442 34457799999999999999999999965 4566889999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+.+|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 175 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG- 175 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccc-
Confidence 99999885 34689999999999999999999999 999999999999999999999999999986532211
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
........||+.|+|||++.......++.++||||+||++|
T Consensus 176 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ 216 (289)
T 3og7_A 176 -----SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHH
T ss_pred -----cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHH
Confidence 11223467999999999997433333455699999999998
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-33 Score=299.42 Aligned_cols=231 Identities=20% Similarity=0.249 Sum_probs=162.2
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE------------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC
Q 041467 476 SKATNNFSPANKIREGGFNIVYN------------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID 541 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~ 541 (746)
....++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++||||+++++++....
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 34567899999999999999995 799988654 2344678999999999999999999999998876
Q ss_pred cc------cchhhhccCCccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 542 FE------GFDFKAISNGQLR-----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 542 ~~------~lv~e~~~~g~l~-----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
.. ++||||+.+|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCC
Confidence 55 8999999999985 11589999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------cc
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NK 676 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~ 676 (746)
+||+|||+|+........ .......||+.|+|||++.+..++.+ +||||+||++|.... .. ..
T Consensus 176 ~kl~Dfg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ell~~g~~p~~~~~~~ 246 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYY------RQGCASKLPVKWLALESLADNLYTVH---SDVWAFGVTMWEIMTRGQTPYAGIENA 246 (323)
T ss_dssp EEECCCCC-----------------------CCGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred EEEeeccccccccccccc------cccccccCcccccCchhhcCCCCCCc---cchhhHHHHHHHHHhCCCCCccccChH
Confidence 999999999876432211 11223557889999999988877655 999999999983211 11 01
Q ss_pred chh----h-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 677 SIL----K-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 677 ~i~----~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.+. . ..........+.+..++..|....|+ ||+..+....++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 247 EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp GHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111 1 11112233445566666666666666 888775554444
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-33 Score=291.00 Aligned_cols=177 Identities=25% Similarity=0.345 Sum_probs=141.3
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhhh----hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQK----EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~----~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.++|+..+.||+|+||.||+ ||||++..... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 46788999999999999997 89999865432 23467899999999999999999999999999999999
Q ss_pred hhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC--------CCcEEEcccccccc
Q 041467 548 KAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ--------DVVTHVGDLGLAKF 615 (746)
Q Consensus 548 e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~--------~~~~ki~DfGla~~ 615 (746)
||+++|++. ...+++.++..++.|++.|++|||++...+|+||||||+||+++. ++.+||+|||+++.
T Consensus 86 e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~ 165 (271)
T 3dtc_A 86 EFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165 (271)
T ss_dssp ECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred EcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccc
Confidence 999999886 567899999999999999999999992223999999999999986 77899999999986
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .....||+.|+|||++.+..++.+ +||||+||++|
T Consensus 166 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 205 (271)
T 3dtc_A 166 WHRTT----------KMSAAGAYAWMAPEVIRASMFSKG---SDVWSYGVLLW 205 (271)
T ss_dssp --------------------CCGGGSCHHHHHHCCCSHH---HHHHHHHHHHH
T ss_pred ccccc----------ccCCCCccceeCHHHhccCCCCch---hhHHHHHHHHH
Confidence 53211 123578999999999988776554 99999999998
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.9e-33 Score=295.70 Aligned_cols=177 Identities=20% Similarity=0.323 Sum_probs=135.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++...+..++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 356899999999999999997 8999886443 233467889999999999999999999999999999999
Q ss_pred hhccCCccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 548 KAISNGQLR-----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 548 e~~~~g~l~-----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
||+. |++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9998 4553 13589999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .......||+.|+|||++.+... ++.++||||+||++|
T Consensus 159 ~~~~--------~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 200 (317)
T 2pmi_A 159 GIPV--------NTFSSEVVTLWYRAPDVLMGSRT--YSTSIDIWSCGCILA 200 (317)
T ss_dssp TSCC--------CCCCCCCSCCTTCCHHHHTTCCC--CCTHHHHHHHHHHHH
T ss_pred CCCc--------ccCCCCcccccccCchHhhCCCC--CCcHHHHHHHHHHHH
Confidence 3221 11223578999999999976432 244699999999998
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.7e-33 Score=302.30 Aligned_cols=184 Identities=14% Similarity=0.145 Sum_probs=154.3
Q ss_pred hhcCCCCCCeEeec--CCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREG--GFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g--~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+| +||.||+ ||||++.... ....+.+.+|+++++.++|||||++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 45789999999999 9999997 8999987543 344567889999999999999999999999999999
Q ss_pred chhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 545 FDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 545 lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
+||||+++|++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 999999999986 25689999999999999999999999 99999999999999999999999999987653
Q ss_pred CCCCCCCcccccccccccccccccccccccc--cccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAA--RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~~~~DiwSlG~i~~ 668 (746)
....... .........+||+.|+|||++.+ ..++ .++||||+||++|
T Consensus 180 ~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~~~DiwslG~il~ 228 (389)
T 3gni_B 180 SHGQRQR-VVHDFPKYSVKVLPWLSPEVLQQNLQGYD---AKSDIYSVGITAC 228 (389)
T ss_dssp ETTEECS-CBCCCCTTCTTTGGGSCHHHHSTTSSCBC---THHHHHHHHHHHH
T ss_pred ccccccc-ccccccccccccccccCHHHHhccCCCCC---cHhHHHHHHHHHH
Confidence 3221110 11112233579999999999987 3444 4599999999998
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.8e-33 Score=295.16 Aligned_cols=175 Identities=23% Similarity=0.321 Sum_probs=148.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC--cccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID--FEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~--~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++...+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 46789999999999999997 8999987543 334567889999999999999999999998765 67899
Q ss_pred hhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee----CCCCcEEEccccccc
Q 041467 547 FKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL----DQDVVTHVGDLGLAK 614 (746)
Q Consensus 547 ~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl----~~~~~~ki~DfGla~ 614 (746)
|||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+|+
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 9999999985 12389999999999999999999999 99999999999999 788899999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccc--------cccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA--------RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ......||+.|+|||++.. ..+ +.++||||+||++|
T Consensus 165 ~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~---~~~~DiwslG~il~ 214 (319)
T 4euu_A 165 ELEDDE---------QFVSLYGTEEYLHPDMYERAVLRKDHQKKY---GATVDLWSIGVTFY 214 (319)
T ss_dssp ECCTTC---------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCB---CTTHHHHHHHHHHH
T ss_pred ecCCCC---------ceeecccCCCccCHHHhhhccccccccCCC---CcHHHHHHHHHHHH
Confidence 763321 1234679999999999873 334 44699999999998
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.8e-33 Score=315.21 Aligned_cols=231 Identities=18% Similarity=0.252 Sum_probs=180.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
...+|+..+.||+|+||.||+ ||||++.... ...+.|.+|+++|++++|||||+++++|...+..++|||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 456788899999999999997 8999986432 235679999999999999999999999999999999999
Q ss_pred hccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 549 AISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 549 ~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|+++|+|. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 373 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 373 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence 99999985 24589999999999999999999999 999999999999999999999999999987633211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchh---hc--cccCCCc
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSIL---KS--AGIKGKK 688 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~---~~--~~~~~~~ 688 (746)
.......++..|+|||++.+..++.+ +|||||||++|.... .. ...+. .. .......
T Consensus 374 -------~~~~~~~~~~~y~aPE~~~~~~~~~~---sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 443 (495)
T 1opk_A 374 -------TAHAGAKFPIKWTAPESLAYNKFSIK---SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 443 (495)
T ss_dssp -------ECCTTCCCCGGGCCHHHHHHCEECHH---HHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTT
T ss_pred -------eecCCCcCCcceeCHhHHhcCCCCcH---HhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence 11223556789999999988777655 999999999982221 10 01111 11 1111234
Q ss_pred cHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCC
Q 041467 689 TVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPS 722 (746)
Q Consensus 689 ~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~ 722 (746)
+.+.+..++..|+...|. ||++.++...++.+..
T Consensus 444 ~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 444 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 445666666777777777 8999988877776543
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=3.3e-33 Score=301.20 Aligned_cols=173 Identities=20% Similarity=0.257 Sum_probs=142.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID----- 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~----- 541 (746)
..++|+..+.||+|+||.||+ ||||++... .....+++.+|+++++.++|||||++++++...+
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 356799999999999999997 999988543 2334567899999999999999999999998764
Q ss_pred -cccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 542 -FEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 542 -~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
..|+||||+ ++++. ...+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 358999999 67765 45789999999999999999999999 9999999999999999999999999999875
Q ss_pred cCCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. .....+||++|+|||++.+ ..++ .++||||+||++|
T Consensus 179 ~~-----------~~~~~~~t~~y~aPE~~~~~~~~~---~~~DiwslG~il~ 217 (367)
T 1cm8_A 179 DS-----------EMTGYVVTRWYRAPEVILNWMRYT---QTVDIWSVGCIMA 217 (367)
T ss_dssp CS-----------SCCSSCSCGGGCCTHHHHTTTCCC---TTHHHHHHHHHHH
T ss_pred cc-----------ccCcCcCCCCcCCHHHHhCCCCCC---hhhhHHHHHHHHH
Confidence 32 1234678999999999987 4444 4599999999998
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=6e-33 Score=295.64 Aligned_cols=177 Identities=19% Similarity=0.286 Sum_probs=153.9
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|...+.||+|+||.||+ ||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 356789999999999999997 8999876442 3345678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||+.++++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 119 v~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 119 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp EECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999886 45789999999999999999999999 99999999999999999999999999998763221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......||+.|+|||++.+..++. ++|||||||++|
T Consensus 196 ~--------~~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~il~ 232 (335)
T 2owb_A 196 E--------RKKVLCGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMY 232 (335)
T ss_dssp C--------CBCCCCSCCSSCCHHHHHTSCBCT---HHHHHHHHHHHH
T ss_pred c--------cccccCCCccccCHHHhccCCCCc---hhhHHHHHHHHH
Confidence 1 123367999999999998877654 499999999998
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-33 Score=296.99 Aligned_cols=180 Identities=23% Similarity=0.303 Sum_probs=153.3
Q ss_pred hhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC
Q 041467 477 KATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID 541 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~ 541 (746)
...++|...+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 3457889999999999999996 7899886432 344567999999999999999999999999999
Q ss_pred cccchhhhccCCccc-----c------------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC
Q 041467 542 FEGFDFKAISNGQLR-----L------------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDL 592 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~------------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDl 592 (746)
..++||||+++|+|. . ..+++.++..++.|++.||+|||+. +|+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccccc
Confidence 999999999999885 1 1378999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 593 KPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 593 kp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
||+||+++.++.+||+|||+++........ .......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 243 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSY------VKRSQGRIPVKWMAIESLFDHIYTTQ---SDVWSFGVLLW 243 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCE------ECSSCCCSCGGGCCHHHHHHCEECHH---HHHHHHHHHHH
T ss_pred chheEEEcCCCCEEEccccccccccccccc------eeccCCCCcccccChhhhcCCCcCch---hhHHHHHHHHH
Confidence 999999999999999999999876432211 11223567889999999988777655 99999999998
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-33 Score=293.24 Aligned_cols=178 Identities=21% Similarity=0.300 Sum_probs=140.4
Q ss_pred hhhcCCCCCCeEeecCCeeEEE------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 477 KATNNFSPANKIREGGFNIVYN------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
...++|+..+.||+|+||.||+ ||||+..... ....+.+.+|+.++++++||||+++++++. .+..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 3456889999999999999996 7888876432 334567999999999999999999999984 4678
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccC
Confidence 8999999999886 23689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 168 ~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 208 (281)
T 1mp8_A 168 DSTY-------YKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGVCMW 208 (281)
T ss_dssp ------------------CCGGGCCHHHHHHCCCSHH---HHHHHHHHHHH
T ss_pred cccc-------cccccCCCcccccChhhcccCCCCCc---cCchHHHHHHH
Confidence 3211 11223457889999999987776554 99999999988
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-33 Score=287.93 Aligned_cols=177 Identities=22% Similarity=0.344 Sum_probs=134.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 456799999999999999997 8999986443 2234679999999999999999999999999999999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999885 25689999999999999999999999 9999999999999999999999999999875322
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. .......||+.|+|||++.+..++. ++||||+||++|
T Consensus 166 ~--------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 203 (278)
T 3cok_A 166 H--------EKHYTLCGTPNYISPEIATRSAHGL---ESDVWSLGCMFY 203 (278)
T ss_dssp -------------------------------------CTHHHHHHHHHH
T ss_pred C--------CcceeccCCCCcCCcchhcCCCCCc---hhhHHHHHHHHH
Confidence 1 1122367899999999998876655 499999999998
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-31 Score=280.21 Aligned_cols=279 Identities=22% Similarity=0.339 Sum_probs=237.5
Q ss_pred ccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCC
Q 041467 14 CILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLE 93 (746)
Q Consensus 14 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 93 (746)
+..+++|++|+|++|.+++ +|. +..+++|++|+|++|.++. +| .|.++++|++|++++|.+.+. +. +..+++|+
T Consensus 62 ~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~ 135 (347)
T 4fmz_A 62 IEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISDI-SP-LANLTKMY 135 (347)
T ss_dssp GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCC
T ss_pred hhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccCc-hh-hccCCcee
Confidence 5668999999999999984 554 9999999999999999985 44 699999999999999999654 33 89999999
Q ss_pred EEEccCCCCc---CcccCCCCCCEEeccCCCccc---ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCC
Q 041467 94 RLRIDCGGRI---DSLGHLKSLLLLSLAFNQFLS---LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167 (746)
Q Consensus 94 ~L~l~~~~~~---~~~~~l~~L~~L~Ls~N~l~~---l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (746)
.|+++++... ..+..+++|+.|++++|.+.. +..+++|+.|++++|++++..+ +..+++|+.|++++|.++.
T Consensus 136 ~L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 213 (347)
T 4fmz_A 136 SLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITD 213 (347)
T ss_dssp EEECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred EEECCCCCCcccccchhhCCCCcEEEecCCCcCCchhhccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCC
Confidence 9999986433 568899999999999999954 6789999999999999986544 8899999999999999976
Q ss_pred CCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceec
Q 041467 168 GTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGT 247 (746)
Q Consensus 168 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~ 247 (746)
. +. +..+++|+.|++++|.+++. |. +..++ +|+.|++++|.+++. +.+..+++|++|++++|++.+.
T Consensus 214 ~-------~~-~~~~~~L~~L~l~~n~l~~~-~~-~~~l~-~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~ 280 (347)
T 4fmz_A 214 I-------TP-VANMTRLNSLKIGNNKITDL-SP-LANLS-QLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI 280 (347)
T ss_dssp C-------GG-GGGCTTCCEEECCSSCCCCC-GG-GTTCT-TCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC
T ss_pred C-------ch-hhcCCcCCEEEccCCccCCC-cc-hhcCC-CCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC
Confidence 2 22 77899999999999999854 43 77777 799999999999863 5789999999999999999864
Q ss_pred CCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccc
Q 041467 248 IPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTL 327 (746)
Q Consensus 248 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l 327 (746)
+.+..+++|+.|++++|.+++. .|..|+.+++|+.|++++|++++..| +..++++
T Consensus 281 --~~~~~l~~L~~L~L~~n~l~~~---------------------~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 335 (347)
T 4fmz_A 281 --SVLNNLSQLNSLFLNNNQLGNE---------------------DMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKM 335 (347)
T ss_dssp --GGGGGCTTCSEEECCSSCCCGG---------------------GHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTC
T ss_pred --hhhcCCCCCCEEECcCCcCCCc---------------------ChhHhhccccCCEEEccCCccccccC--hhhhhcc
Confidence 4688999999999999998743 34567788999999999999996555 8888898
Q ss_pred cceEEccCcccc
Q 041467 328 SLYLELDNNLLN 339 (746)
Q Consensus 328 ~~~L~Ls~N~l~ 339 (746)
+.|++++|.|+
T Consensus 336 -~~L~l~~N~i~ 346 (347)
T 4fmz_A 336 -DSADFANQVIK 346 (347)
T ss_dssp -SEESSSCC---
T ss_pred -ceeehhhhccc
Confidence 68999999986
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=282.31 Aligned_cols=280 Identities=20% Similarity=0.236 Sum_probs=209.5
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
.+++.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+.+..|..|.++++
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~------ 103 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRK------ 103 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTT------
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCC------
Confidence 46899999999997 7787664 68999999999999777888999999999999999987766666555554
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCccccc--CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLSLS--NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDF 175 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 175 (746)
|++|+|++|++..++ -.++|++|++++|++++..+..|..+++|++|++++|.++... ..
T Consensus 104 --------------L~~L~L~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~----~~ 165 (332)
T 2ft3_A 104 --------------LQKLYISKNHLVEIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSG----FE 165 (332)
T ss_dssp --------------CCEEECCSSCCCSCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGG----SC
T ss_pred --------------CCEEECCCCcCCccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCC----CC
Confidence 445555555554332 1267888888888888777777888888888888888885311 12
Q ss_pred cccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCC
Q 041467 176 INLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGET 255 (746)
Q Consensus 176 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 255 (746)
+..+..+ +|+.|++++|++++ +|..+. .+|+.|++++|++++..|..|.++++|+.|+|++|++.+..|..+..+
T Consensus 166 ~~~~~~l-~L~~L~l~~n~l~~-l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 240 (332)
T 2ft3_A 166 PGAFDGL-KLNYLRISEAKLTG-IPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFL 240 (332)
T ss_dssp TTSSCSC-CCSCCBCCSSBCSS-CCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGC
T ss_pred cccccCC-ccCEEECcCCCCCc-cCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCC
Confidence 3456666 88888888888874 565543 368888888888887777888888888888888888887777788888
Q ss_pred CCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhc------ccccc
Q 041467 256 PNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSV------TTLSL 329 (746)
Q Consensus 256 ~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~l~~ 329 (746)
++|+.|+|++|+++ .+|..+..+++|+.|++++|+|++..+..+... ..+ .
T Consensus 241 ~~L~~L~L~~N~l~----------------------~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l-~ 297 (332)
T 2ft3_A 241 PTLRELHLDNNKLS----------------------RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYY-N 297 (332)
T ss_dssp TTCCEEECCSSCCC----------------------BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCB-S
T ss_pred CCCCEEECCCCcCe----------------------ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccc-c
Confidence 88888888888876 456667788888888888888885444444433 334 5
Q ss_pred eEEccCcccc--ccCchhhhcccCC
Q 041467 330 YLELDNNLLN--GSLPPEVGNLKNL 352 (746)
Q Consensus 330 ~L~Ls~N~l~--~~~p~~~~~l~~L 352 (746)
.|++++|++. +..|..|..+++|
T Consensus 298 ~L~l~~N~~~~~~~~~~~~~~l~~L 322 (332)
T 2ft3_A 298 GISLFNNPVPYWEVQPATFRCVTDR 322 (332)
T ss_dssp EEECCSSSSCGGGSCGGGGTTBCCS
T ss_pred ceEeecCcccccccCcccccccchh
Confidence 7888888876 4455555544443
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-33 Score=311.05 Aligned_cols=224 Identities=20% Similarity=0.212 Sum_probs=172.7
Q ss_pred hhhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-cccchhh
Q 041467 477 KATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID-FEGFDFK 548 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~-~~~lv~e 548 (746)
...++|+..+.||+|+||.||+ ||||+++... ..+.|.+|+++|++++|||||++++++.... ..++|||
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 3456788999999999999997 9999986432 4567999999999999999999999987765 7899999
Q ss_pred hccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 549 AISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 549 ~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|+++|+|. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence 99999986 22379999999999999999999999 9999999999999999999999999999854211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchh----hc-cccCCCc
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSIL----KS-AGIKGKK 688 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~----~~-~~~~~~~ 688 (746)
.....++..|+|||++.+..++.+ +|||||||++|.... .. ...+. .. .......
T Consensus 343 ---------~~~~~~~~~y~aPE~~~~~~~~~~---sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~ 410 (450)
T 1k9a_A 343 ---------QDTGKLPVKWTAPEALREKKFSTK---SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG 410 (450)
T ss_dssp -------------CCCTTTSCHHHHHSSCCCHH---HHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTT
T ss_pred ---------ccCCCCCcceeCHHHhcCCCCCcH---HHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCc
Confidence 112357889999999988877655 999999999983221 10 01111 10 1112234
Q ss_pred cHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 689 TVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 689 ~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
+.+.+..++..|+...|. ||+..++...++.
T Consensus 411 ~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~ 442 (450)
T 1k9a_A 411 CPPAVYDVMKNCWHLDAATRPTFLQLREQLEH 442 (450)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 456666677777777777 8888876654443
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-33 Score=322.03 Aligned_cols=215 Identities=20% Similarity=0.200 Sum_probs=170.9
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|.++++.+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 356899999999999999996 899998754 234456788999999988 6999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+||||+++|+|. ...+++.++..|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+.....
T Consensus 419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 999999999986 46799999999999999999999999 9999999999999999999999999999864221
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-----------ccccchhhccc----c
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-----------KQNKSILKSAG----I 684 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-----------~~~~~i~~~~~----~ 684 (746)
. ......+||+.|||||++.+..++. ++|||||||++|.... +....|..... .
T Consensus 496 ~--------~~~~~~~GT~~Y~APE~l~~~~~~~---~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~ 564 (674)
T 3pfq_A 496 G--------VTTKTFCGTPDYIAPEIIAYQPYGK---SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS 564 (674)
T ss_dssp T--------CCBCCCCSCSSSCCHHHHTCCCBST---HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTT
T ss_pred C--------cccccccCCCcccCHhhhcCCCCCc---cceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCcc
Confidence 1 1234578999999999998887755 5999999999992111 11112222211 1
Q ss_pred CCCccHHHHHHhhCCCCCCCCC
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+.+..+.+..|+..++.+||.
T Consensus 565 ~s~~~~~li~~lL~~dP~~R~~ 586 (674)
T 3pfq_A 565 MSKEAVAICKGLMTKHPGKRLG 586 (674)
T ss_dssp SCHHHHHHHHHHSCSSSTTCTT
T ss_pred CCHHHHHHHHHHccCCHHHCCC
Confidence 2245566777777777766654
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-33 Score=304.85 Aligned_cols=231 Identities=19% Similarity=0.235 Sum_probs=163.8
Q ss_pred cCCCCCCeEeecCCeeEEE------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEec-CCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSS-IDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~~l 545 (746)
..|+..+.||+|+||.||+ ||||++... .....+.+.+|+.++++++|||||+++++|.. .+..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 3466778999999999995 788887543 23456789999999999999999999999765 457889
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|+|. ...+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+|+.+...
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999986 34578999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------cc----chhh-ccccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NK----SILK-SAGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~----~i~~-~~~~~~ 686 (746)
... .........||+.|+|||++.+..++.+ +|||||||++|.... .. .. .+.. ......
T Consensus 246 ~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p 318 (373)
T 3c1x_A 246 EFD----SVHNKTGAKLPVKWMALESLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 318 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCC
T ss_pred ccc----cccccCCCCCcccccChHHhcCCCCCcH---HHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 211 1112234567889999999988877655 999999999982211 10 00 0111 111112
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
..+.+.+..++..|+...|. ||+..++...++.+
T Consensus 319 ~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 319 EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 33445566666666666676 88888777665553
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-33 Score=288.99 Aligned_cols=177 Identities=19% Similarity=0.286 Sum_probs=153.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|...+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 346789999999999999997 8999876442 3345678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||++++++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 93 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 93 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999886 35789999999999999999999999 99999999999999999999999999998753221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......||+.|+|||++.+..++. ++||||+||++|
T Consensus 170 ~--------~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~~l~ 206 (294)
T 2rku_A 170 E--------RKKVLCGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMY 206 (294)
T ss_dssp C--------CBCCCCSCCSSCCHHHHTTSCBCT---HHHHHHHHHHHH
T ss_pred c--------ccccccCCCCcCCcchhccCCCCc---hhhHHHHHHHHH
Confidence 1 122367899999999998776654 599999999998
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-32 Score=285.41 Aligned_cols=176 Identities=22% Similarity=0.351 Sum_probs=152.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 357899999999999999997 8999986543 33456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc---EEEccccccccccC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV---THVGDLGLAKFLYG 618 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~---~ki~DfGla~~~~~ 618 (746)
|||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||++.....
T Consensus 84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999885 45689999999999999999999999 9999999999999976554 99999999976532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. .......||+.|+|||++.+..++. ++||||+||++|
T Consensus 161 ~---------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~~l~ 198 (284)
T 3kk8_A 161 S---------EAWHGFAGTPGYLSPEVLKKDPYSK---PVDIWACGVILY 198 (284)
T ss_dssp S---------CBCCCSCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred C---------ccccCCCCCcCCcCchhhcCCCCCc---ccchHHHHHHHH
Confidence 2 1123467999999999998877654 499999999998
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-33 Score=291.14 Aligned_cols=175 Identities=25% Similarity=0.386 Sum_probs=144.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-----hhhhHHHHHHHHHhhcCC---CCceeeEEEEEecC
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-----KEASRSFAAEFNALRNIR---HRNLIKIITICSSI 540 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---HpnIv~l~~~~~~~ 540 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++ |||||+++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999997 8999986432 112346778888777775 99999999999875
Q ss_pred C-----cccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEc
Q 041467 541 D-----FEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608 (746)
Q Consensus 541 ~-----~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 608 (746)
. ..++||||+. |++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 5 4789999997 4654 22389999999999999999999999 99999999999999999999999
Q ss_pred cccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 609 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|||+|+..... .......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 163 Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~il~ 210 (308)
T 3g33_A 163 DFGLARIYSYQ---------MALTPVVVTLWYRAPEVLLQSTYATP---VDMWSVGCIFA 210 (308)
T ss_dssp SCSCTTTSTTC---------CCSGGGGCCCSSCCHHHHHTSCCCST---HHHHHHHHHHH
T ss_pred eCccccccCCC---------cccCCccccccccCchHHcCCCCCch---HHHHHHHHHHH
Confidence 99999865321 12234679999999999988877554 99999999998
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-33 Score=290.98 Aligned_cols=227 Identities=18% Similarity=0.248 Sum_probs=170.0
Q ss_pred hhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 477 KATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
...++|+..+.||+|+||.||+ ||||++..... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 3456888999999999999996 89999864422 34668999999999999999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--- 173 (283)
T 3gen_A 100 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--- 173 (283)
T ss_dssp CCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH---
T ss_pred ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc---
Confidence 99999885 35689999999999999999999999 9999999999999999999999999999865321
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-----------ccchhhc-cccCCCcc
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-----------NKSILKS-AGIKGKKT 689 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-----------~~~i~~~-~~~~~~~~ 689 (746)
.........||+.|+|||++.+..++.+ +||||+||++|.... .. ...+... ........
T Consensus 174 ----~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (283)
T 3gen_A 174 ----EYTSSVGSKFPVRWSPPEVLMYSKFSSK---SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA 246 (283)
T ss_dssp ----HHHSTTSTTSCGGGCCHHHHHHCCCSHH---HHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTC
T ss_pred ----ccccccCCccCcccCCHHHhccCCCCch---hhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcC
Confidence 1122234567889999999998776554 999999999983221 11 0011111 11112223
Q ss_pred HHHHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 690 VSFFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 690 ~~~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
.+.+..++..|+...|. ||+..++...+
T Consensus 247 ~~~l~~li~~~l~~~p~~Rps~~~ll~~L 275 (283)
T 3gen_A 247 SEKVYTIMYSCWHEKADERPTFKILLSNI 275 (283)
T ss_dssp CHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence 34455555555555665 77777655443
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-33 Score=310.26 Aligned_cols=233 Identities=21% Similarity=0.271 Sum_probs=174.3
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
+....++|+..+.||+|+||.||+ ||||++.... ...+.|.+|+++|++++|||||++++++.+ +..++|
T Consensus 179 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv 256 (452)
T 1fmk_A 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256 (452)
T ss_dssp SBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred cccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence 334556788999999999999997 8999987543 234679999999999999999999999876 678999
Q ss_pred hhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 547 FKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 547 ~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
|||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 257 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred ehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 9999999986 24589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchhh----c-cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSILK----S-AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~~----~-~~~~~ 686 (746)
.. .......||..|+|||++.+..++.+ +|||||||++|.... .. ..++.. . .....
T Consensus 334 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~---sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~ 403 (452)
T 1fmk_A 334 EY-------TARQGAKFPIKWTAPEAALYGRFTIK---SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 403 (452)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC
T ss_pred ce-------ecccCCcccccccCHhHHhcCCCCcc---ccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 11 11223457889999999988777554 999999999983221 10 001111 1 11112
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPS 722 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~ 722 (746)
..+.+.+..++..|+...|. ||++.++...++.+..
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 34455566667777777777 8899887776666543
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-33 Score=305.71 Aligned_cols=178 Identities=20% Similarity=0.301 Sum_probs=139.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--------hhhHHHHHHHHHhhcCCCCceeeEEEEEecC
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQK--------EASRSFAAEFNALRNIRHRNLIKIITICSSI 540 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--------~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~ 540 (746)
..++|...+.||+|+||.||+ ||||++..... .....+.+|++++++++|||||++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 457899999999999999997 89999865421 122358899999999999999999999865
Q ss_pred CcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC---CcEEEccccc
Q 041467 541 DFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD---VVTHVGDLGL 612 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~---~~~ki~DfGl 612 (746)
+..++||||+++|+|. ...+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeeccc
Confidence 4578999999999985 45689999999999999999999999 99999999999999654 4599999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+..... ......+||+.|+|||++.+.....++.++||||+||++|
T Consensus 289 a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ 335 (419)
T 3i6u_A 289 SKILGET---------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335 (419)
T ss_dssp TTSCC--------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHH
T ss_pred ceecCCC---------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHH
Confidence 9876321 1223467999999999997533333455699999999998
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.8e-33 Score=297.58 Aligned_cols=182 Identities=28% Similarity=0.322 Sum_probs=154.8
Q ss_pred CcccHHHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-----CCceeeE
Q 041467 468 PMISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-----HRNLIKI 533 (746)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-----HpnIv~l 533 (746)
..++..+-....++|+..+.||+|+||.||+ ||||++... ....+.+.+|++++++++ |||||++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 3455555566678999999999999999996 899998632 234456788999999986 9999999
Q ss_pred EEEEecCCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-----
Q 041467 534 ITICSSIDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ----- 601 (746)
Q Consensus 534 ~~~~~~~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~----- 601 (746)
++++...+..++||||+ +|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 177 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEK 177 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCE
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccc
Confidence 99999999999999999 78875 23489999999999999999999999 9999999999999975
Q ss_pred --------------------CCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCcccee
Q 041467 602 --------------------DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVM 661 (746)
Q Consensus 602 --------------------~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~Diw 661 (746)
++.+||+|||+|+..... .....||+.|+|||++.+..++.+ +|||
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~---~Diw 243 (360)
T 3llt_A 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----------HGSIINTRQYRAPEVILNLGWDVS---SDMW 243 (360)
T ss_dssp EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----------CCSCCSCGGGCCHHHHTTCCCCTT---HHHH
T ss_pred cccchhcccccccccccccCCCCEEEEeccCceecCCC-----------CcCccCcccccCcHHHcCCCCCCc---cchH
Confidence 789999999999864221 123678999999999998877654 9999
Q ss_pred eccceee
Q 041467 662 SFPQRFA 668 (746)
Q Consensus 662 SlG~i~~ 668 (746)
|+||++|
T Consensus 244 slG~il~ 250 (360)
T 3llt_A 244 SFGCVLA 250 (360)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999998
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-33 Score=293.31 Aligned_cols=176 Identities=24% Similarity=0.276 Sum_probs=152.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhh------hhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE------ASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~------~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
..++|+..+.||+|+||.||+ ||||++...... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 356789999999999999997 899988654221 35679999999999999999999999999999
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC----cEEEcccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV----VTHVGDLGLA 613 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~----~~ki~DfGla 613 (746)
.++||||+++|+|. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 99999999999986 45689999999999999999999999 999999999999999887 7999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+...... ......||+.|+|||++.+..++. ++||||+||++|
T Consensus 167 ~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~il~ 209 (321)
T 2a2a_A 167 HEIEDGV---------EFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVITY 209 (321)
T ss_dssp EECCTTC---------CCCCCCSCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred eecCccc---------cccccCCCCCccCcccccCCCCCC---ccccHHHHHHHH
Confidence 8764321 123367999999999998877654 599999999998
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-33 Score=302.73 Aligned_cols=183 Identities=18% Similarity=0.200 Sum_probs=147.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhhhh-----------hhHHHHHHHHHhhcCCCCceee
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKE-----------ASRSFAAEFNALRNIRHRNLIK 532 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~HpnIv~ 532 (746)
..++|+..+.||+|+||.||+ ||||++...... ....+.+|+..++.++|||||+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 456899999999999999997 689987543211 1123556777888999999999
Q ss_pred EEEEEecC----CcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC--
Q 041467 533 IITICSSI----DFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-- 600 (746)
Q Consensus 533 l~~~~~~~----~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-- 600 (746)
+++++... ...++||||+ +|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence 99998875 4589999999 88886 25799999999999999999999999 999999999999998
Q ss_pred CCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 601 QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 601 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.++.+||+|||+|+.+........ .........+||+.|||||++.+..++.+ +|||||||++|
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 252 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKA-YAADPKRCHDGTIEFTSIDAHNGVAPSRR---GDLEILGYCMI 252 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCC-SSCCSSCCCCCCTTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred CCCeEEEEECCcceecccCCcccc-cccCcccccCCCCCccCHHHhCCCCCCch---hhHHHHHHHHH
Confidence 889999999999987643322111 11112234679999999999998877554 99999999998
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-33 Score=296.30 Aligned_cols=185 Identities=19% Similarity=0.301 Sum_probs=149.8
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-----hhhhHHHHHHHHHhhcCCCCceeeEEEEEec
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-----KEASRSFAAEFNALRNIRHRNLIKIITICSS 539 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-----~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~ 539 (746)
++....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 4456678899999999999999996 8999886542 3345679999999999999999999999999
Q ss_pred CCcccchhhhccCCccccc---------------------------------------------CCCHHHHHHHHHHHHH
Q 041467 540 IDFEGFDFKAISNGQLRLC---------------------------------------------NLSLTQRVNIAIDVAF 574 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~~~---------------------------------------------~l~~~~~~~i~~~i~~ 574 (746)
.+..++||||+++|+|... .+++..+..++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 9999999999999988510 1256778899999999
Q ss_pred HHHHHHhcCCCCeEEcCCCCCCeeeCCCC--cEEEccccccccccCCCCCCCcccccccccccccccccccccccc--cc
Q 041467 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDV--VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA--RN 650 (746)
Q Consensus 575 ~l~yLH~~~~~~ivHrDlkp~NILl~~~~--~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~ 650 (746)
||+|||+. +|+||||||+||+++.++ .+||+|||+|+.+...... .........||+.|+|||++.+ ..
T Consensus 180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~ 252 (345)
T 3hko_A 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG----EYYGMTTKAGTPYFVAPEVLNTTNES 252 (345)
T ss_dssp HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC------------CCCGGGCCHHHHTCSSSC
T ss_pred HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCcc----ccccccccCCCccccCchhhccCCCC
Confidence 99999999 999999999999998766 8999999999876432221 1112334679999999999975 33
Q ss_pred cccCCCccceeeccceee
Q 041467 651 LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 651 ~~~~~~~~DiwSlG~i~~ 668 (746)
+ +.++|||||||++|
T Consensus 253 ~---~~~~DiwslG~il~ 267 (345)
T 3hko_A 253 Y---GPKCDAWSAGVLLH 267 (345)
T ss_dssp C---CTHHHHHHHHHHHH
T ss_pred C---CcHHHHHHHHHHHH
Confidence 4 44699999999998
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-33 Score=294.99 Aligned_cols=241 Identities=17% Similarity=0.233 Sum_probs=181.2
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEE
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKII 534 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~ 534 (746)
+..+++....++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 33455566678899999999999999995 8899886432 33455789999999999999999999
Q ss_pred EEEecCCcccchhhhccCCcccc---------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee
Q 041467 535 TICSSIDFEGFDFKAISNGQLRL---------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599 (746)
Q Consensus 535 ~~~~~~~~~~lv~e~~~~g~l~~---------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl 599 (746)
+++.+.+..++||||+++|+|.. ..+++.++..++.|++.||+|||+. +|+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEE
Confidence 99999999999999999999861 3568999999999999999999999 99999999999999
Q ss_pred CCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c--
Q 041467 600 DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N-- 675 (746)
Q Consensus 600 ~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~-- 675 (746)
+.++.+||+|||+++....... ........||+.|+|||++.+..++.+ +||||+||++|.... .. .
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~el~~~g~~p~~ 242 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDY------YRKGGKGLLPVRWMSPESLKDGVFTTY---SDVWSFGVVLWEIATLAEQPYQ 242 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGC------EEGGGSSEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHHTSCCTTT
T ss_pred cCCCeEEECcCccccccccccc------cccccCCCCCCCccChhhhccCCCCch---hhHHHHHHHHHHHHhcCCCccc
Confidence 9999999999999986533211 111223567899999999988777554 999999999983221 10 0
Q ss_pred ----cc----hhh-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCC
Q 041467 676 ----KS----ILK-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPS 722 (746)
Q Consensus 676 ----~~----i~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~ 722 (746)
.. +.. ..........+.+..++..|+...|. ||+..++...++....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 243 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp TSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred cCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 00 111 01111223334455555555555566 8888877766666543
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-33 Score=301.01 Aligned_cols=180 Identities=19% Similarity=0.283 Sum_probs=151.4
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||||++.... ..+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 36789999999999999997 8999876432 234588999999999 89999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc-----EEEcccccccccc
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV-----THVGDLGLAKFLY 617 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~ki~DfGla~~~~ 617 (746)
|+ +|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+|+...
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 88875 35799999999999999999999999 9999999999999998887 9999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....... .........+||+.|+|||++.+..++.+ +|||||||++|
T Consensus 162 ~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ 208 (330)
T 2izr_A 162 DPETKKH-IPYREHKSLTGTARYMSINTHLGKEQSRR---DDLEALGHMFM 208 (330)
T ss_dssp CTTTCCB-CCCCCCCCCCSCTTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred cCCCCcc-ccccccCCcCCCccccChHHHcCCCCCch---hHHHHHHHHHH
Confidence 4322110 01112345789999999999998877554 99999999998
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-32 Score=289.37 Aligned_cols=167 Identities=20% Similarity=0.277 Sum_probs=128.5
Q ss_pred CCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchhhhccCCc
Q 041467 485 ANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKAISNGQ 554 (746)
Q Consensus 485 ~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~e~~~~g~ 554 (746)
.+.||+|+||.||+ ||||++... ....+.+|+++++.+. |||||++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 47899999999997 899998633 3456789999999997 9999999999999999999999999999
Q ss_pred cc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC---cEEEccccccccccCCCCCCCcc
Q 041467 555 LR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV---VTHVGDLGLAKFLYGYEPGTTAE 626 (746)
Q Consensus 555 l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~---~~ki~DfGla~~~~~~~~~~~~~ 626 (746)
+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++......
T Consensus 93 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~------ 163 (325)
T 3kn6_A 93 LFERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN------ 163 (325)
T ss_dssp HHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC------
Confidence 85 45789999999999999999999999 999999999999997665 89999999998653221
Q ss_pred cccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 627 TASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 627 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+..++.+ +||||+||++|
T Consensus 164 --~~~~~~~~t~~y~aPE~~~~~~~~~~---~DiwslG~il~ 200 (325)
T 3kn6_A 164 --QPLKTPCFTLHYAAPELLNQNGYDES---CDLWSLGVILY 200 (325)
T ss_dssp ----------------------CCCCHH---HHHHHHHHHHH
T ss_pred --CcccccCCCcCccCHHHhcCCCCCCc---cchHHHHHHHH
Confidence 12234678999999999988877654 99999999998
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-32 Score=286.48 Aligned_cols=174 Identities=18% Similarity=0.301 Sum_probs=152.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 46789999999999999997 8999886442 22346789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-- 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-- 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS--
T ss_pred EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc--
Confidence 9999999885 45689999999999999999999999 9999999999999999999999999998764321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 168 --------~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 203 (284)
T 2vgo_A 168 --------RRRTMCGTLDYLPPEMIEGKTHDEK---VDLWCAGVLCY 203 (284)
T ss_dssp --------CBCCCCSCGGGCCHHHHTTCCBCTT---HHHHHHHHHHH
T ss_pred --------ccccccCCCCcCCHHHhccCCCCcc---cchhhHHHHHH
Confidence 1123678999999999988776554 99999999998
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-33 Score=298.18 Aligned_cols=178 Identities=24% Similarity=0.326 Sum_probs=143.3
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh-----hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQK-----EASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~-----~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
...++|+..+.||+|+||.||+ ||||++..... ...+.+.+|++++++++|||||++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 3457899999999999999997 89999865322 123468899999999999999999999999999
Q ss_pred ccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 543 EGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 543 ~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
.++||||+.+ ++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999986 443 34589999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... ......+||+.|+|||++.+... ++.++||||+||++|
T Consensus 163 ~~~~--------~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 204 (346)
T 1ua2_A 163 GSPN--------RAYTHQVVTRWYRAPELLFGARM--YGVGVDMWAVGCILA 204 (346)
T ss_dssp TSCC--------CCCCCSCCCCTTCCHHHHTTCSC--CCHHHHHHHHHHHHH
T ss_pred cCCc--------ccCCcccccccccCchHhhCCCC--CCchhhhHhHHHHHH
Confidence 3221 12234678999999999976542 233599999999998
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-33 Score=299.74 Aligned_cols=176 Identities=19% Similarity=0.232 Sum_probs=141.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID----- 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~----- 541 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|+.+++.++|||||++++++...+
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 356899999999999999996 899998643 2344567889999999999999999999998765
Q ss_pred -cccchhhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 542 -FEGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 542 -~~~lv~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
..++||||+.++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+....
T Consensus 103 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 103 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp CEEEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred cceEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 579999999754332 45689999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 180 ~---------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 217 (371)
T 2xrw_A 180 S---------FMMTPYVVTRYYRAPEVILGMGYKE---NVDIWSVGCIMG 217 (371)
T ss_dssp -------------------CTTCCHHHHTTCCCCT---THHHHHHHHHHH
T ss_pred c---------cccCCceecCCccCHHHhcCCCCCc---hHhHHHHHHHHH
Confidence 1 1223467999999999999877655 499999999998
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-33 Score=297.63 Aligned_cols=235 Identities=18% Similarity=0.190 Sum_probs=175.1
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEec
Q 041467 476 SKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSS 539 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~ 539 (746)
....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||+++++++..
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 34557899999999999999995 8999886442 33456799999999999 89999999999999
Q ss_pred CCcccchhhhccCCccc-----c-----------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcC
Q 041467 540 IDFEGFDFKAISNGQLR-----L-----------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGD 591 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~-----~-----------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrD 591 (746)
.+..++||||+++|+|. . ..+++.++..++.|++.||+|||+. +|+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence 99999999999999985 1 1278999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc
Q 041467 592 LKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE 671 (746)
Q Consensus 592 lkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~ 671 (746)
|||+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.+ +|||||||++|...
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~el~ 268 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSN------YVVRGNARLPVKWMAPESLFEGIYTIK---SDVWSYGILLWEIF 268 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTT------SEEETTEEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCcc------ceeccCccCccCccCHHHhccCCCChh---HhHHHHHHHHHHHH
Confidence 999999999999999999999987643321 112234567889999999988776554 99999999998322
Q ss_pred c-cc--------cc---chhhc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCC
Q 041467 672 K-KQ--------NK---SILKS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPS 722 (746)
Q Consensus 672 ~-~~--------~~---~i~~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~ 722 (746)
. .. .. .+... .........+.+..++..|+...|. ||+..++...+..+..
T Consensus 269 t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 269 SLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp TTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred cCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 1 11 00 01111 1111122344555555555666666 8888877766655443
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=273.89 Aligned_cols=268 Identities=19% Similarity=0.271 Sum_probs=173.8
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
.++++++++++.++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|.+.+..|..+.++++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 47999999999997 6777664 68999999999999877778999999999999999998777777666666666655
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCccccc--CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLSLS--NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDF 175 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 175 (746)
++ |++..++ -.++|+.|++++|++++..+..|..+++|++|++++|.++... ..
T Consensus 108 s~--------------------n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~----~~ 163 (330)
T 1xku_A 108 SK--------------------NQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG----IE 163 (330)
T ss_dssp CS--------------------SCCSBCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG----BC
T ss_pred CC--------------------CcCCccChhhcccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccC----cC
Confidence 54 4443322 1245666666666666655556666666666666666664211 12
Q ss_pred cccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCC
Q 041467 176 INLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGET 255 (746)
Q Consensus 176 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 255 (746)
+..+.++++|++|++++|.++ .+|..+. .+|+.|++++|++++..|..|..+++|++|+|++|++.+..+..+..+
T Consensus 164 ~~~~~~l~~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 239 (330)
T 1xku_A 164 NGAFQGMKKLSYIRIADTNIT-TIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 239 (330)
T ss_dssp TTGGGGCTTCCEEECCSSCCC-SCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred hhhccCCCCcCEEECCCCccc-cCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCC
Confidence 344556666666666666665 3444332 256666666666666556666666666666666666666655566666
Q ss_pred CCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhc------ccccc
Q 041467 256 PNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSV------TTLSL 329 (746)
Q Consensus 256 ~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~l~~ 329 (746)
++|++|+|++|+++ .+|..+..+++|++|++++|+|++..+..+... ..+ .
T Consensus 240 ~~L~~L~L~~N~l~----------------------~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l-~ 296 (330)
T 1xku_A 240 PHLRELHLNNNKLV----------------------KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASY-S 296 (330)
T ss_dssp TTCCEEECCSSCCS----------------------SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCC-S
T ss_pred CCCCEEECCCCcCc----------------------cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccc-c
Confidence 66666666666655 344455566666666666666664333333221 333 3
Q ss_pred eEEccCcccc
Q 041467 330 YLELDNNLLN 339 (746)
Q Consensus 330 ~L~Ls~N~l~ 339 (746)
.|++++|++.
T Consensus 297 ~l~l~~N~~~ 306 (330)
T 1xku_A 297 GVSLFSNPVQ 306 (330)
T ss_dssp EEECCSSSSC
T ss_pred ceEeecCccc
Confidence 5666666664
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-32 Score=284.89 Aligned_cols=179 Identities=21% Similarity=0.306 Sum_probs=153.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 46789999999999999996 8999986543 3345678999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-- 160 (276)
T 2yex_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-- 160 (276)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE--
T ss_pred ecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc--
Confidence 99998886 34689999999999999999999999 999999999999999999999999999986532211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
........||+.|+|||++.+..+. +.++||||+||++|
T Consensus 161 ----~~~~~~~~~~~~y~aPE~~~~~~~~--~~~~Di~slG~il~ 199 (276)
T 2yex_A 161 ----ERLLNKMCGTLPYVAPELLKRREFH--AEPVDVWSCGIVLT 199 (276)
T ss_dssp ----ECCBCCCCSCGGGCCGGGGTCSSBC--HHHHHHHHHHHHHH
T ss_pred ----hhcccCCccccCccChHHHhcCCCC--CCcchHHHHHHHHH
Confidence 1122346799999999999876652 23599999999998
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-33 Score=297.79 Aligned_cols=190 Identities=22% Similarity=0.297 Sum_probs=143.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec-----CCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS-----IDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-----~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++...... .....+|+..++.++||||+++++++.. ....++
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~-~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQ-NFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred ChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccchh-hHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 457899999999999999997 999998644322 1122345555667999999999986543 224689
Q ss_pred hhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 546 DFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHC------QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 546 v~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~------~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
||||+++|+|. ....++..+..++.||+.||+|||+.+ .++|+||||||+|||++.++.+||+|||+|+.
T Consensus 90 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~ 169 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169 (336)
T ss_dssp EECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceee
Confidence 99999999986 456799999999999999999999873 33899999999999999999999999999987
Q ss_pred ccCCCCCCCccccccccccccccccccccccccccc----ccCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL----ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~----~~~~~~~DiwSlG~i~~ 668 (746)
+..................+||+.|+|||++.+... ..++.++|||||||++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ 226 (336)
T 3g2f_A 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYW 226 (336)
T ss_dssp CSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHH
Confidence 654332211111222335679999999999987311 11234599999999998
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-33 Score=289.13 Aligned_cols=223 Identities=22% Similarity=0.298 Sum_probs=164.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh-------hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQK-------EASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~-------~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
.++|+..+.||+|+||.||+ ||||++..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46788999999999999996 89998854321 12267999999999999999999999987654
Q ss_pred ccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCeeeCCCCc-----EEEcc
Q 041467 543 EGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS--IVHGDLKPSNILLDQDVV-----THVGD 609 (746)
Q Consensus 543 ~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivHrDlkp~NILl~~~~~-----~ki~D 609 (746)
++||||+++|++. ...+++..+..++.|++.|++|||+. + |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 6999999999884 44689999999999999999999999 7 999999999999987776 99999
Q ss_pred ccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-------------cc
Q 041467 610 LGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-------------NK 676 (746)
Q Consensus 610 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-------------~~ 676 (746)
||+++.... ......||+.|+|||++.+... .++.++||||+||++|...... ..
T Consensus 173 fg~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~ 240 (287)
T 4f0f_A 173 FGLSQQSVH-----------SVSGLLGNFQWMAPETIGAEEE-SYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240 (287)
T ss_dssp CTTCBCCSS-----------CEECCCCCCTTSCGGGSSCSSC-EECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHH
T ss_pred CCccccccc-----------cccccCCCccccCchhhccCCC-CcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHH
Confidence 999975321 1233679999999999843321 1234599999999998221110 00
Q ss_pred chhh--ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 677 SILK--SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 677 ~i~~--~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.+.. ..+.......+.+..++..|+...|. ||+..++...++
T Consensus 241 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp HHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 0011 11112233344455555555555666 777776654443
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-33 Score=293.11 Aligned_cols=222 Identities=19% Similarity=0.272 Sum_probs=159.9
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
.++|+..+.||+|+||.||+ ||||++... ...+.+.+|++++++++|||||++++++.+ ..++||||++
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred HhHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 35688899999999999997 899998632 345679999999999999999999998874 5789999999
Q ss_pred CCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc-EEEccccccccccCCCCC
Q 041467 552 NGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV-THVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 552 ~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~-~ki~DfGla~~~~~~~~~ 622 (746)
+|+|. ...+++.++..++.|+++|++|||+.+..+|+||||||+||+++.++. +||+|||+++.....
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 99985 124688999999999999999999943239999999999999988876 799999999765221
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc---------ccchh----h-ccccCCCc
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ---------NKSIL----K-SAGIKGKK 688 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~---------~~~i~----~-~~~~~~~~ 688 (746)
.....||+.|+|||++.+..++. ++|||||||++|...... ...+. . ..+.....
T Consensus 160 --------~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (307)
T 2eva_A 160 --------MTNNKGSAAWMAPEVFEGSNYSE---KCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKN 228 (307)
T ss_dssp -------------CCTTSSCHHHHTCCCCCT---HHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTT
T ss_pred --------cccCCCCCceEChhhhCCCCCCc---HHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccc
Confidence 12356899999999998877654 599999999998221111 00000 0 01111123
Q ss_pred cHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 689 TVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 689 ~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
..+.+..++..|+...|. ||++.++...+.
T Consensus 229 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 229 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 334455555555555666 788876665444
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-33 Score=291.66 Aligned_cols=232 Identities=19% Similarity=0.236 Sum_probs=169.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEec-CCcc
Q 041467 478 ATNNFSPANKIREGGFNIVYN------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSS-IDFE 543 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~ 543 (746)
....|+..+.||+|+||.||+ ||+|++... .....+.+.+|++++++++||||+++++++.. .+..
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 345688899999999999995 688887643 23445679999999999999999999998654 5578
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|+|. ...+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+|+...
T Consensus 103 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp EEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred EEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccc
Confidence 8999999999986 34589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-----------ccchhhc-ccc
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-----------NKSILKS-AGI 684 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-----------~~~i~~~-~~~ 684 (746)
..... .........||+.|+|||++.+..++.+ +||||+||++|.... .. ...+... ...
T Consensus 180 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
T 3f66_A 180 DKEYY----SVHNKTGAKLPVKWMALESLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 252 (298)
T ss_dssp CGGGC----BC-----CCBCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCC
T ss_pred ccchh----ccccccCCCCCccccChHHhcCCCCChH---HHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCC
Confidence 32211 1122334678899999999988877655 999999999982211 10 0001111 111
Q ss_pred CCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
......+.+..++..|+...|. ||+..++...++.
T Consensus 253 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 288 (298)
T 3f66_A 253 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 288 (298)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1122334444455555555555 7787766655544
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-33 Score=293.81 Aligned_cols=244 Identities=20% Similarity=0.194 Sum_probs=175.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec----CCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS----IDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 346799999999999999997 89998865555566789999999999999999999999873 34788
Q ss_pred chhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 545 FDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 545 lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
+||||+.+|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 999999999985 35689999999999999999999999 999999999999999999999999999876
Q ss_pred ccCCCCCCC-cccccccccccccccccccccccccccccCCCccceeeccceeecccccc------------ccchhh-c
Q 041467 616 LYGYEPGTT-AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ------------NKSILK-S 681 (746)
Q Consensus 616 ~~~~~~~~~-~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~------------~~~i~~-~ 681 (746)
......... ...........||+.|+|||++.+.....++.++|||||||++|...... ...... .
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 263 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc
Confidence 422111000 00001122356899999999998765433455799999999998221111 000000 0
Q ss_pred ccc-CCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCCCC
Q 041467 682 AGI-KGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPSRS 724 (746)
Q Consensus 682 ~~~-~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~~~ 724 (746)
... ......+.+..++..|+...|. ||+..++...++.+..+.
T Consensus 264 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 264 LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 011 1122334444555555555566 888888777766655443
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-33 Score=294.68 Aligned_cols=230 Identities=22% Similarity=0.248 Sum_probs=168.8
Q ss_pred cCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
.+|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 4677789999999999996 7899886432 3345578999999999999999999999999999999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999886 35689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc--ccc----------cchhhc-cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQN----------KSILKS-AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~~----------~~i~~~-~~~~~ 686 (746)
... ........||+.|+|||++.+..++.+ +||||+||++|.... ... ..+... .....
T Consensus 201 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~ 272 (333)
T 1mqb_A 201 PEA-----TYTTSGGKIPIRWTAPEAISYRKFTSA---SDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP 272 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC
T ss_pred ccc-----ccccCCCCccccccCchhcccCCCCch---hhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCc
Confidence 211 111223456889999999988777654 999999999983211 110 011111 11112
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
....+.+..++..|+...|. ||+..++...++++
T Consensus 273 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 273 MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 23445566666666666666 88888776655543
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-33 Score=298.09 Aligned_cols=182 Identities=19% Similarity=0.282 Sum_probs=149.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC------
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI------ 540 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~------ 540 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|+++++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 356899999999999999997 8999875443 22345788999999999999999999999874
Q ss_pred --CcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 541 --DFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 541 --~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
+..++||||+.++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 95 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 95 CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp --CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3578999999853332 35689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.+...... .........||+.|+|||++.+... ++.++||||+||++|
T Consensus 172 ~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 220 (351)
T 3mi9_A 172 RAFSLAKNS----QPNRYTNRVVTLWYRPPELLLGERD--YGPPIDLWGAGCIMA 220 (351)
T ss_dssp EECCCCSSS----SCCCCCSSCSCGGGCCHHHHTTCCS--CCTHHHHHHHHHHHH
T ss_pred ccccccccc----cccccCCcccccCccCchhhcCCCC--CCcHhHHHHHHHHHH
Confidence 876433221 1122345679999999999976432 234699999999998
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-33 Score=303.41 Aligned_cols=172 Identities=16% Similarity=0.194 Sum_probs=140.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHH---HHhhcCCCCceeeEE-------E
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEF---NALRNIRHRNLIKII-------T 535 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~---~~l~~l~HpnIv~l~-------~ 535 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|+ +++++++|||||+++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 356788899999999999997 999998633 234557799999 566666899999998 6
Q ss_pred EEecCC-----------------cccchhhhccCCccc-----ccCCC-------HHHHHHHHHHHHHHHHHHHhcCCCC
Q 041467 536 ICSSID-----------------FEGFDFKAISNGQLR-----LCNLS-------LTQRVNIAIDVAFAIEYLRHHCQPS 586 (746)
Q Consensus 536 ~~~~~~-----------------~~~lv~e~~~~g~l~-----~~~l~-------~~~~~~i~~~i~~~l~yLH~~~~~~ 586 (746)
++.+.+ ..++||||+ +|+|. ...++ +..+..++.||+.||+|||++ +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 665543 278999999 67875 12233 488889999999999999999 9
Q ss_pred eEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccccccccccccccccccccccccc-----------ccccCC
Q 041467 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR-----------NLENRE 655 (746)
Q Consensus 587 ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----------~~~~~~ 655 (746)
|+||||||+|||++.++.+||+|||+|+... ......+| +.|+|||++.+. .++.
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~-----------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~-- 292 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG-----------ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTF-- 292 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETT-----------CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCH--
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecC-----------CcccCCCC-cCccChhhhcccccccccccccccCCh--
Confidence 9999999999999999999999999998531 12234678 999999999877 5544
Q ss_pred Cccceeeccceee
Q 041467 656 KRHTVMSFPQRFA 668 (746)
Q Consensus 656 ~~~DiwSlG~i~~ 668 (746)
++|||||||++|
T Consensus 293 -~~DvwSlG~il~ 304 (377)
T 3byv_A 293 -SFDAWALGLVIY 304 (377)
T ss_dssp -HHHHHHHHHHHH
T ss_pred -hhhHHHHHHHHH
Confidence 599999999998
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-32 Score=300.21 Aligned_cols=170 Identities=19% Similarity=0.242 Sum_probs=136.7
Q ss_pred hcCCCCC-CeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHh-hcCCCCceeeEEEEEec----CCcc
Q 041467 479 TNNFSPA-NKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNAL-RNIRHRNLIKIITICSS----IDFE 543 (746)
Q Consensus 479 ~~~~~~~-~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l-~~l~HpnIv~l~~~~~~----~~~~ 543 (746)
.++|... +.||+|+||.||+ ||||++.. ...+.+|++++ +..+|||||++++++.. ....
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3456665 6899999999996 89999852 23577888887 45589999999999875 5578
Q ss_pred cchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEcccccc
Q 041467 544 GFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGDLGLA 613 (746)
Q Consensus 544 ~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DfGla 613 (746)
++||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+|
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccc
Confidence 9999999999985 23589999999999999999999999 9999999999999987 789999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+..... ......+||+.|+|||++.+..++. ++|||||||++|
T Consensus 212 ~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 254 (400)
T 1nxk_A 212 KETTSH---------NSLTTPCYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMY 254 (400)
T ss_dssp EECC--------------------CTTCCGGGSCCCCSSS---HHHHHHHHHHHH
T ss_pred cccCCC---------CccccCCCCCCccCHhhcCCCCCCC---cccHHHHHHHHH
Confidence 865321 1223478999999999998877654 599999999998
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=8.7e-33 Score=297.59 Aligned_cols=173 Identities=20% Similarity=0.293 Sum_probs=134.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC------
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSI------ 540 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~------ 540 (746)
..++|+..+.||+|+||.||+ ||||++... .....+++.+|+++++.++||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 457899999999999999997 899998643 233456788999999999999999999998764
Q ss_pred CcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 541 DFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
...++|+|++ +++|. ...+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred CeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 4578999998 56665 45689999999999999999999999 9999999999999999999999999999864
Q ss_pred cCCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. .....+||++|+|||++.+ ..++ .++||||+||++|
T Consensus 183 ~~-----------~~~~~~~t~~y~aPE~~~~~~~~~---~~~DiwslG~il~ 221 (367)
T 2fst_X 183 AD-----------EMTGYVATRWYRAPEIMLNWMHYN---QTVDIWSVGCIMA 221 (367)
T ss_dssp -------------------CCCTTCCHHHHTTCCSCC---TTHHHHHHHHHHH
T ss_pred cc-----------cCCCcCcCcCccChHHHcCCcCCC---chhhHHHHHHHHH
Confidence 22 1234689999999999987 4444 4599999999998
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.9e-33 Score=293.07 Aligned_cols=177 Identities=19% Similarity=0.273 Sum_probs=145.9
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
.++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|+.++++++|||||++++++. .+..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 35788899999999999996 5666654322 233456789999999999999999999986 46688
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+||||+.+|++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+....
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999985 34789999999999999999999999 999999999999999999999999999988643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .......||..|+|||++.+..++.+ +||||+||++|
T Consensus 168 ~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 208 (325)
T 3kex_A 168 DDKQ------LLYSEAKTPIKWMALESIHFGKYTHQ---SDVWSYGVTVW 208 (325)
T ss_dssp CTTC------CC-----CCTTTSCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred cccc------ccccCCCCcccccChHHhccCCCChh---hHhHHhHHHHH
Confidence 3221 12234668889999999988877654 99999999998
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-32 Score=289.32 Aligned_cols=178 Identities=22% Similarity=0.330 Sum_probs=149.7
Q ss_pred cCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccc
Q 041467 480 NNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFE 543 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~ 543 (746)
..|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4588899999999999985 8999986443 33456799999999999999999999999886 567
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccccc
Confidence 8999999999986 34689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .........||..|+|||++.+..++.+ +||||+||++|
T Consensus 178 ~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 220 (302)
T 4e5w_A 178 TDKE-----YYTVKDDRDSPVFWYAPECLMQSKFYIA---SDVWSFGVTLH 220 (302)
T ss_dssp TTCC-----EEECCCCTTCCGGGCCHHHHHHCEEEHH---HHHHHHHHHHH
T ss_pred CCCc-----ceeccCCCCCCccccCCeeecCCCCCcc---hhHHHHHHHHH
Confidence 3321 1122334668899999999988877655 99999999998
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-33 Score=294.31 Aligned_cols=179 Identities=20% Similarity=0.263 Sum_probs=153.2
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec--CCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS--IDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~~ 543 (746)
.++|+..+.||+|+||.||+ ||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 35788999999999999985 89999876655666789999999999999999999999874 4468
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 8999999999986 34689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .........||..|+|||++.+..++.+ +||||+||++|
T Consensus 179 ~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 221 (327)
T 3lxl_A 179 LDKD-----YYVVREPGQSPIFWYAPESLSDNIFSRQ---SDVWSFGVVLY 221 (327)
T ss_dssp TTCS-----EEECSSCCCSCGGGSCHHHHHHCEEEHH---HHHHHHHHHHH
T ss_pred cCCc-----cceeeccCCccccccCHHHhccCCCChH---HhHHHHHHHHH
Confidence 3221 1112233568899999999988877655 99999999998
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-33 Score=293.81 Aligned_cols=231 Identities=19% Similarity=0.203 Sum_probs=174.3
Q ss_pred hhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecC
Q 041467 477 KATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSSI 540 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~ 540 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 3456899999999999999995 7899886443 23456799999999999 899999999999999
Q ss_pred CcccchhhhccCCccc-----cc------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCe
Q 041467 541 DFEGFDFKAISNGQLR-----LC------------------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~-----~~------------------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NI 597 (746)
+..++||||+++|+|. .. .+++.++..++.|++.||+|||+. +|+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence 9999999999999885 11 389999999999999999999999 999999999999
Q ss_pred eeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc--
Q 041467 598 LLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-- 674 (746)
Q Consensus 598 Ll~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-- 674 (746)
+++.++.+||+|||+++........ .......||+.|+|||++.+..++.+ +||||+||++|.... ..
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ellt~g~~p 247 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNY------VVKGNARLPVKWMAPESIFNCVYTFE---SDVWSYGIFLWELFSLGSSP 247 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTS------EECSSSEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTTCCS
T ss_pred EEcCCCCEEEccccccccccccccc------eeccCCCCcceeeChHHhcCCCCChH---HHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999876433211 11223567889999999988776554 999999999983221 11
Q ss_pred ---------ccchhhc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 675 ---------NKSILKS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 675 ---------~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
....... .........+.+..++..|+...|. ||+..++...+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 248 YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (313)
T ss_dssp STTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 0011111 1111123334455555555555565 7787776655544
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-33 Score=303.25 Aligned_cols=172 Identities=22% Similarity=0.295 Sum_probs=142.6
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC------ccc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID------FEG 544 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------~~~ 544 (746)
..+|+..+.||+|+||.||+ ||+|++.... +...+|+++++.++|||||+++++|...+ ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 35689999999999999996 7888774322 12347999999999999999999996644 378
Q ss_pred chhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-CCCcEEEcccccccc
Q 041467 545 FDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGDLGLAKF 615 (746)
Q Consensus 545 lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ki~DfGla~~ 615 (746)
+||||++++.+. ...+++..+..++.||++||+|||+. +|+||||||+|||++ .++.+||+|||+|+.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 999999876543 45789999999999999999999999 999999999999998 799999999999987
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .....+||+.|+|||++.+... ++.++||||+||++|
T Consensus 192 ~~~~~---------~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwSlG~il~ 233 (394)
T 4e7w_A 192 LIAGE---------PNVSYICSRYYRAPELIFGATN--YTTNIDIWSTGCVMA 233 (394)
T ss_dssp CCTTC---------CCCSSCSCGGGCCHHHHTTCSS--CCTHHHHHHHHHHHH
T ss_pred ccCCC---------CCcccccCcCccCHHHHcCCCC--CCcHHHHHHHHHHHH
Confidence 63322 1234678999999999976532 244699999999999
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-32 Score=285.90 Aligned_cols=174 Identities=19% Similarity=0.305 Sum_probs=147.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++... .......+.+|+..+..+ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 456799999999999999997 899988643 233456788999999999 89999999999999999999
Q ss_pred hhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC--------------
Q 041467 546 DFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-------------- 602 (746)
Q Consensus 546 v~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~-------------- 602 (746)
||||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 99999999986 15689999999999999999999999 99999999999999844
Q ss_pred -----CcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 603 -----VVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 603 -----~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..+||+|||.+...... ....||+.|+|||++.+... .+.++||||+||++|
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~--~~~~~Di~slG~il~ 222 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSP------------QVEEGDSRFLANEVLQENYT--HLPKADIFALALTVV 222 (289)
T ss_dssp ----CCCEEECCCTTCEETTCS------------CCCCCCGGGCCHHHHTTCCT--THHHHHHHHHHHHHH
T ss_pred ccCCceEEEEcccccccccCCc------------cccCCCccccChhHhcCCCC--CCchhhHHHHHHHHH
Confidence 47999999999875321 12458999999999986532 123599999999998
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-32 Score=288.70 Aligned_cols=229 Identities=18% Similarity=0.196 Sum_probs=169.7
Q ss_pred CCCCCCeEeecCCeeEEE------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc-cch
Q 041467 481 NFSPANKIREGGFNIVYN------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE-GFD 546 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~-~lv 546 (746)
.|...+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+.+.. +++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 455678999999999995 7899876432 34457799999999999999999999999876654 899
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||+.+|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999986 35688999999999999999999999 99999999999999999999999999998653321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccc----hhhc-cccCCC
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKS----ILKS-AGIKGK 687 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~----i~~~-~~~~~~ 687 (746)
. ..........||+.|+|||++.+..++.+ +||||+||++|.... .. ... +... ......
T Consensus 179 ~----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
T 3pls_A 179 Y----YSVQQHRHARLPVKWTALESLQTYRFTTK---SDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPE 251 (298)
T ss_dssp G----GCSCCSSCTTCGGGGSCHHHHTTCCCCHH---HHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCT
T ss_pred c----cccccCcCCCCCccccChhhhccCCCChh---hchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCc
Confidence 1 01122234678999999999988877655 999999999982211 10 001 1111 111122
Q ss_pred ccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 688 KTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
...+.+..++..|+...|. ||+..++...++.
T Consensus 252 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 252 YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284 (298)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cchHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 2334455555555555565 7787766655544
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-32 Score=305.99 Aligned_cols=175 Identities=25% Similarity=0.334 Sum_probs=150.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++|||||++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 456799999999999999997 8999986543 23456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC---CCCcEEEccccccccccC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~---~~~~~ki~DfGla~~~~~ 618 (746)
|||+.+|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+|+....
T Consensus 100 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999985 46789999999999999999999999 999999999999995 467899999999986532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......+||+.|+|||++.+. ++ .++||||+||++|
T Consensus 177 ~---------~~~~~~~gt~~y~aPE~~~~~-~~---~~~DiwslG~il~ 213 (486)
T 3mwu_A 177 N---------TKMKDRIGTAYYIAPEVLRGT-YD---EKCDVWSAGVILY 213 (486)
T ss_dssp C-------------CCTTGGGGCCGGGGGSC-CC---HHHHHHHHHHHHH
T ss_pred C---------CccCCCcCCCCCCCHHHhCCC-CC---chhhHHHHHHHHH
Confidence 2 122346799999999998764 44 4599999999998
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-33 Score=294.15 Aligned_cols=180 Identities=18% Similarity=0.243 Sum_probs=147.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..++|+..+.||+|+||.||+ ||+|++........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 456789999999999999997 89999876655667789999999999999999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 170 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--- 170 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH---
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc---
Confidence 99999885 35689999999999999999999999 9999999999999999999999999998643211
Q ss_pred CCccccccccccccccccccccccccc--ccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAAR--NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~~~~~DiwSlG~i~~ 668 (746)
........||+.|+|||++... ....++.++|||||||++|
T Consensus 171 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~ 213 (302)
T 2j7t_A 171 -----LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLI 213 (302)
T ss_dssp -----HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHH
T ss_pred -----ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHH
Confidence 1112236789999999998521 1112345699999999998
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-32 Score=302.25 Aligned_cols=172 Identities=24% Similarity=0.274 Sum_probs=146.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC------CCCceeeEEEEEecCCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI------RHRNLIKIITICSSIDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l------~HpnIv~l~~~~~~~~~ 542 (746)
...+|+..+.||+|+||.||+ ||||++... ....+.+.+|+++++.+ +||||+++++++...+.
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 345799999999999999997 899998643 23345677888888777 57799999999999999
Q ss_pred ccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc--EEEcccccc
Q 041467 543 EGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV--THVGDLGLA 613 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~--~ki~DfGla 613 (746)
.++||||+.+ ++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+|
T Consensus 174 ~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 174 ICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 9999999974 553 23489999999999999999999999 9999999999999999887 999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.... .....+||+.|+|||++.+..++. ++|||||||++|
T Consensus 250 ~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlG~il~ 290 (429)
T 3kvw_A 250 CYEHQ-----------RVYTYIQSRFYRAPEVILGARYGM---PIDMWSLGCILA 290 (429)
T ss_dssp EETTC-----------CCCSSCSCGGGCCHHHHHTBCCCT---HHHHHHHHHHHH
T ss_pred eecCC-----------cccccCCCCCccChHHHhCCCCCc---hHHHHhHHHHHH
Confidence 76421 123467999999999999887755 499999999998
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-33 Score=294.73 Aligned_cols=173 Identities=21% Similarity=0.311 Sum_probs=147.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
..++|+..+.||+|+||.||+ ||||++..... ...+|++++.++ +|||||++++++.+.+..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 456799999999999999997 89999864432 346788888888 7999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-C---CcEEEccccccccccC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-D---VVTHVGDLGLAKFLYG 618 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-~---~~~ki~DfGla~~~~~ 618 (746)
||+++|++. ...+++.++..++.||+.|++|||+. +|+||||||+||++.+ + +.+||+|||+++....
T Consensus 96 E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 96 ELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 999999885 45689999999999999999999999 9999999999999843 2 3599999999987643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. ......+||+.|+|||++.+..++.+ +||||+||++|
T Consensus 173 ~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~il~ 211 (342)
T 2qr7_A 173 EN--------GLLMTPCYTANFVAPEVLERQGYDAA---CDIWSLGVLLY 211 (342)
T ss_dssp TT--------CCBCCSSCCSSCCCHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred CC--------CceeccCCCccccCHHHhcCCCCCCc---cCeeeHhHHHH
Confidence 21 12234679999999999988777655 99999999998
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-33 Score=294.57 Aligned_cols=229 Identities=18% Similarity=0.214 Sum_probs=164.5
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
.++|+..+.||+|+||.||+ ||+|.+... .....+.+.+|++++++++|||||+++++|.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 46789999999999999997 466665432 2334577999999999999999999999998754 77
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+++|++.+|++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 899999999885 35689999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc----------ccchhhc--cccC
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ----------NKSILKS--AGIK 685 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~----------~~~i~~~--~~~~ 685 (746)
.... .......||+.|+|||++.+..++.+ +||||+||++|.... .. ....... ....
T Consensus 170 ~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T 3lzb_A 170 EEKE------YHAEGGKVPIKWMALESILHRIYTHQ---SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240 (327)
T ss_dssp ----------------CCCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC
T ss_pred cccc------ccccCCCccccccCHHHHcCCCCChH---HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 2211 12223557889999999998877655 999999999983221 11 0011111 1111
Q ss_pred CCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 686 GKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
.......+..++..|+...|. ||+..++...+.++
T Consensus 241 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 276 (327)
T 3lzb_A 241 PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 223344455555555556666 88888766555543
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-32 Score=292.88 Aligned_cols=179 Identities=22% Similarity=0.312 Sum_probs=141.1
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 34567899999999999999997 8999986442 223456789999999999999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee-----CCCCcEEEccccccc
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL-----DQDVVTHVGDLGLAK 614 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl-----~~~~~~ki~DfGla~ 614 (746)
+||||+.+ ++. ...+++.++..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||+|+
T Consensus 110 lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 99999974 554 45689999999999999999999999 99999999999999 455669999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... .......||+.|+|||++.+... ++.++||||+||++|
T Consensus 186 ~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 229 (329)
T 3gbz_A 186 AFGIPI--------RQFTHEIITLWYRPPEILLGSRH--YSTSVDIWSIACIWA 229 (329)
T ss_dssp HHC-------------------CCTTCCHHHHTTCCC--CCTHHHHHHHHHHHH
T ss_pred ccCCcc--------cccCCCcCCccccCHHHhcCCCC--CCcHHHHHHHHHHHH
Confidence 763221 12234678999999999987542 234699999999998
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-33 Score=313.11 Aligned_cols=235 Identities=20% Similarity=0.270 Sum_probs=180.0
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
++....++|+..+.||+|+||.||+ ||||++.... ...+.|.+|+++|++++|||||++++++.+ +..++
T Consensus 261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp CSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence 3444566788899999999999997 9999986543 234679999999999999999999999876 67899
Q ss_pred hhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 546 DFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 546 v~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
||||+.+|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 99999999986 24589999999999999999999999 999999999999999999999999999987532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchhh----c-cccC
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSILK----S-AGIK 685 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~~----~-~~~~ 685 (746)
.. ........++..|+|||++.+..++.+ +|||||||++|.... .. ..++.. . ....
T Consensus 416 ~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~---sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~ 485 (535)
T 2h8h_A 416 NE-------YTARQGAKFPIKWTAPEAALYGRFTIK---SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 485 (535)
T ss_dssp HH-------HHTTCSTTSCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCC
T ss_pred Cc-------eecccCCcCcccccCHHHhccCCCCch---hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 11 111223457889999999988777554 999999999983222 10 001111 0 1111
Q ss_pred CCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCCC
Q 041467 686 GKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPSR 723 (746)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~~ 723 (746)
...+.+.+..++..|+...|+ ||++.++...++.+...
T Consensus 486 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 486 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 234445566667777777777 89999888777765543
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-33 Score=304.46 Aligned_cols=171 Identities=24% Similarity=0.328 Sum_probs=140.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC------cc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID------FE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------~~ 543 (746)
..+|+..+.||+|+||.||+ ||||++.... +...+|++++++++|||||+++++|...+ +.
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 34688899999999999997 8999885322 22457999999999999999999986522 36
Q ss_pred cchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC-CcEEEccccccc
Q 041467 544 GFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-VVTHVGDLGLAK 614 (746)
Q Consensus 544 ~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~-~~~ki~DfGla~ 614 (746)
++||||++++... ...+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+|+
T Consensus 129 ~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 7899999865332 35689999999999999999999999 99999999999999954 678999999998
Q ss_pred cccCCCCCCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
.+.... .....+||++|+|||++.+. .+ +.++||||+||++|
T Consensus 206 ~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~---~~~~DiwSlG~il~ 248 (420)
T 1j1b_A 206 QLVRGE---------PNVSYICSRYYRAPELIFGATDY---TSSIDVWSAGCVLA 248 (420)
T ss_dssp ECCTTC---------CCCSCCSCTTSCCHHHHTTCSSC---CTHHHHHHHHHHHH
T ss_pred hcccCC---------CceeeeeCCCcCCHHHHcCCCCC---CchhhhHHHHHHHH
Confidence 763221 12346799999999999765 44 44699999999998
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-32 Score=283.26 Aligned_cols=176 Identities=23% Similarity=0.329 Sum_probs=145.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 46789999999999999996 8999986543 23456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||++++++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE- 165 (276)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc-
Confidence 9999999985 45689999999999999999999999 99999999999999999999999999998753221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+..+. +.++||||+||++|
T Consensus 166 --------~~~~~~~~~~y~aPE~~~~~~~~--~~~~Di~slG~~l~ 202 (276)
T 2h6d_A 166 --------FLRTSCGSPNYAAPEVISGRLYA--GPEVDIWSCGVILY 202 (276)
T ss_dssp -------------------CCTGGGTTSCCC--HHHHHHHHHHHHHH
T ss_pred --------ceecccCCccccCHHHHcCCCCC--CccchHHHHHHHHH
Confidence 12235789999999999877552 23599999999998
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.3e-33 Score=292.75 Aligned_cols=175 Identities=20% Similarity=0.293 Sum_probs=140.4
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhh-hhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKE-ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
++|+..+.||+|+||.||+ ||||++...... ....+.+|++++++++|||||++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 5788999999999999997 899988644322 222456899999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+.+ ++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--- 154 (324)
T 3mtl_A 82 LDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--- 154 (324)
T ss_dssp CSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc---
Confidence 974 543 34589999999999999999999999 99999999999999999999999999998653211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+... ++.++||||+||++|
T Consensus 155 -----~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 192 (324)
T 3mtl_A 155 -----KTYDNEVVTLWYRPPDILLGSTD--YSTQIDMWGVGCIFY 192 (324)
T ss_dssp -------------CGGGCCHHHHTTCCC--CCTHHHHHHHHHHHH
T ss_pred -----cccccccCcccccChhhhcCCCC--CCcHHHHHHHHHHHH
Confidence 12233578999999999976432 244699999999998
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-32 Score=290.09 Aligned_cols=183 Identities=21% Similarity=0.284 Sum_probs=145.1
Q ss_pred hcCCCCC-CeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchh
Q 041467 479 TNNFSPA-NKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~-~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.+.|+.. +.||+|+||.||+ ||||++........+.+.+|+++++++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3567764 7899999999997 899998755445567899999999985 7999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc---EEEccccccccccCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV---THVGDLGLAKFLYGY 619 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~---~ki~DfGla~~~~~~ 619 (746)
||+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.....
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred EcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 999999986 45789999999999999999999999 9999999999999987765 999999999865422
Q ss_pred CCCCCcccccccccccccccccccccccc-----cccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAA-----RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .........+||+.|+|||++.+ ..+ +.++||||+||++|
T Consensus 168 ~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~---~~~~DiwslG~il~ 217 (316)
T 2ac3_A 168 GDCSP-ISTPELLTPCGSAEYMAPEVVEAFSEEASIY---DKRCDLWSLGVILY 217 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHH---TTTHHHHHHHHHHH
T ss_pred Ccccc-ccccccccccCCcCccChHHhhcccccccCC---CcccccHhHHHHHH
Confidence 21100 01112234679999999999975 334 44599999999998
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-32 Score=298.22 Aligned_cols=173 Identities=20% Similarity=0.296 Sum_probs=141.3
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC-------
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI------- 540 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~------- 540 (746)
...++|+..+.||+|+||.||+ ||||++.... +...+|+++++.++|||||+++++|...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 4567899999999999999997 8999885332 2245799999999999999999998543
Q ss_pred -------------------------------CcccchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHH
Q 041467 541 -------------------------------DFEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLR 580 (746)
Q Consensus 541 -------------------------------~~~~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH 580 (746)
...++||||+++ ++. ...+++..+..++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 237899999985 432 357899999999999999999999
Q ss_pred hcCCCCeEEcCCCCCCeeeC-CCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccc
Q 041467 581 HHCQPSIVHGDLKPSNILLD-QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHT 659 (746)
Q Consensus 581 ~~~~~~ivHrDlkp~NILl~-~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~D 659 (746)
+. +|+||||||+||+++ .++.+||+|||+|+...... ......||+.|+|||++.+... ++.++|
T Consensus 159 ~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~--~~~~~D 224 (383)
T 3eb0_A 159 SL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---------PSVAYICSRFYRAPELMLGATE--YTPSID 224 (383)
T ss_dssp TT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---------CCCCCCCCSSCCCHHHHTTCSS--CCTHHH
T ss_pred HC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---------CCcCcccCCCccCHHHhcCCCC--CCcchh
Confidence 99 999999999999997 68999999999998763322 2234678999999999987542 234599
Q ss_pred eeeccceee
Q 041467 660 VMSFPQRFA 668 (746)
Q Consensus 660 iwSlG~i~~ 668 (746)
|||+||++|
T Consensus 225 iwslG~il~ 233 (383)
T 3eb0_A 225 LWSIGCVFG 233 (383)
T ss_dssp HHHHHHHHH
T ss_pred hhhHHHHHH
Confidence 999999998
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-32 Score=293.49 Aligned_cols=179 Identities=22% Similarity=0.285 Sum_probs=144.1
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhh--hhhhHHHHHHHHHhhcCCC--CceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQ--KEASRSFAAEFNALRNIRH--RNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~--~~~~~~~~~E~~~l~~l~H--pnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++| |||+++++++...+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45789999999999999997 8999886432 3445679999999999986 9999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|| +.+|++. ...+++.++..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+|+.......
T Consensus 88 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp EC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred Ee-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 99 5677775 45789999999999999999999999 999999999999997 67899999999987643221
Q ss_pred CCCcccccccccccccccccccccccccc--------cccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARN--------LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--------~~~~~~~~DiwSlG~i~~ 668 (746)
.......+||+.|+|||++.+.. ...++.++|||||||++|
T Consensus 163 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ 211 (343)
T 3dbq_A 163 ------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 211 (343)
T ss_dssp -------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHH
T ss_pred ------cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHH
Confidence 11223467999999999997521 112344699999999998
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-32 Score=285.96 Aligned_cols=177 Identities=21% Similarity=0.305 Sum_probs=145.6
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 36789999999999999997 8999875432 233567889999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||++++++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 156 (311)
T 4agu_A 82 EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS-- 156 (311)
T ss_dssp ECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc--
Confidence 999998875 45689999999999999999999999 99999999999999999999999999998763221
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+... ++.++||||+||++|
T Consensus 157 ------~~~~~~~~~~~y~aPE~~~~~~~--~~~~~Di~slG~il~ 194 (311)
T 4agu_A 157 ------DYYDDEVATRWYRSPELLVGDTQ--YGPPVDVWAIGCVFA 194 (311)
T ss_dssp ---------------GGGCCHHHHHTCSC--CCTHHHHHHHHHHHH
T ss_pred ------cccCCCcCCccccChHHHhcCCC--CCcchhhHHHHHHHH
Confidence 11234678999999999976432 244699999999998
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-32 Score=291.35 Aligned_cols=231 Identities=19% Similarity=0.261 Sum_probs=175.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE----------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEec
Q 041467 478 ATNNFSPANKIREGGFNIVYN----------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSS 539 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~----------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~ 539 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 457899999999999999995 7899886442 34456789999999999 89999999999999
Q ss_pred CCcccchhhhccCCccc-----c----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCee
Q 041467 540 IDFEGFDFKAISNGQLR-----L----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~-----~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NIL 598 (746)
.+..++||||+++|+|. . ..+++.++..++.||+.||+|||+. +|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 99999999999999885 1 1388999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc---
Q 041467 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ--- 674 (746)
Q Consensus 599 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~--- 674 (746)
++.++.+||+|||+++....... ........||+.|+|||++.+..++.+ +||||+||++|.... ..
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ellt~g~~p~ 260 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDY------YKKTTNGRLPVKWMAPEALFDRVYTHQ---SDVWSFGVLMWEIFTLGGSPY 260 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSS------EECCSCCCCCGGGCCHHHHHHCEECHH---HHHHHHHHHHHHHHTTSCCSS
T ss_pred EcCCCCEEEcccccccccccccc------ccccCCCCcccceeChHHhcCCCcChH---HHHHHHHHHHHHHHhCCCCCc
Confidence 99999999999999987643221 111223567889999999988776554 999999999983221 10
Q ss_pred ----ccchhh---c--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 675 ----NKSILK---S--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 675 ----~~~i~~---~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
...+.. . .........+.+..++..|+...|. ||+..++...++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp TTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 001110 0 1111223344555555556666666 88888776655543
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-32 Score=307.25 Aligned_cols=175 Identities=24% Similarity=0.341 Sum_probs=151.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 346799999999999999996 9999986442 3345679999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee---CCCCcEEEcccccccccc
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DfGla~~~~ 617 (746)
||||+.+|++. ...+++.++..++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||+|+...
T Consensus 104 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp EECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 99999999985 46789999999999999999999999 99999999999999 467899999999998763
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. ......+||+.|+|||++.+ .+ +.++||||+||++|
T Consensus 181 ~~---------~~~~~~~gt~~y~aPE~~~~-~~---~~~~DiwslG~il~ 218 (484)
T 3nyv_A 181 AS---------KKMKDKIGTAYYIAPEVLHG-TY---DEKCDVWSTGVILY 218 (484)
T ss_dssp CC---------CSHHHHTTGGGTCCHHHHHT-CC---CTHHHHHHHHHHHH
T ss_pred cc---------cccccCCCCccccCceeecC-CC---CCcceeHHHHHHHH
Confidence 22 12234679999999999876 34 44699999999998
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-32 Score=289.20 Aligned_cols=176 Identities=24% Similarity=0.323 Sum_probs=148.8
Q ss_pred CCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccccc
Q 041467 482 FSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFEGF 545 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~~l 545 (746)
|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 38899999999999953 8999987543 34456799999999999999999999999874 46789
Q ss_pred hhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 546 DFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 546 v~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 189 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189 (318)
T ss_dssp EECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS
T ss_pred EEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccccccc
Confidence 99999999986 45689999999999999999999999 999999999999999999999999999987643221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.........||..|+|||++.+..++.+ +||||+||++|
T Consensus 190 -----~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 228 (318)
T 3lxp_A 190 -----YYRVREDGDSPVFWYAPECLKEYKFYYA---SDVWSFGVTLY 228 (318)
T ss_dssp -----EEEC---CCCCGGGCCHHHHHHCEEEHH---HHHHHHHHHHH
T ss_pred -----ccccccCCCCCceeeChHHhcCCCCCcH---HHHHHHHHHHH
Confidence 1112233568899999999998877655 99999999998
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-32 Score=305.22 Aligned_cols=175 Identities=22% Similarity=0.339 Sum_probs=146.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|+++++.++|||||+++++|.+....++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 345789999999999999996 8999986543 33456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEccccccccccC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DfGla~~~~~ 618 (746)
||||++|++. ...+++.++..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+|+....
T Consensus 115 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 115 MECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999985 45789999999999999999999999 9999999999999975 45699999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......+||+.|+|||++.+ .+ +.++||||+||++|
T Consensus 192 ~---------~~~~~~~gt~~y~aPE~l~~-~~---~~~~DiwslG~il~ 228 (494)
T 3lij_A 192 Q---------KKMKERLGTAYYIAPEVLRK-KY---DEKCDVWSIGVILF 228 (494)
T ss_dssp T---------BCBCCCCSCTTTCCHHHHTT-CB---CTHHHHHHHHHHHH
T ss_pred C---------ccccccCCCcCeeCHHHHcc-cC---CCchhHHHHHHHHH
Confidence 2 12234679999999999864 34 44699999999998
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-32 Score=294.10 Aligned_cols=236 Identities=15% Similarity=0.156 Sum_probs=167.0
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhhhh-----------hhhHHHHHHHHHhhcCCCCceeeEEE
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLKQK-----------EASRSFAAEFNALRNIRHRNLIKIIT 535 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~HpnIv~l~~ 535 (746)
.++|+..+.||+|+||.||+ ||||+...... ...+.+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 36799999999999999997 78887753321 11234778999999999999999999
Q ss_pred EEec----CCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC--c
Q 041467 536 ICSS----IDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV--V 604 (746)
Q Consensus 536 ~~~~----~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~--~ 604 (746)
++.. ....++||||+ +|+|. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++ .
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCc
Confidence 9988 67899999999 88886 33789999999999999999999999 999999999999998777 9
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc---------c
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ---------N 675 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~---------~ 675 (746)
+||+|||+|+.+........ ..........||+.|+|||++.+..++.+ +|||||||++|...... .
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQ-YQENPRKGHNGTIEFTSLDAHKGVALSRR---SDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp EEECCCTTCEESSGGGCCCC-CCCCGGGCSCSCTTTCCHHHHHTCCCCHH---HHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred EEEEeCCCceeccccccccc-chhccccccCCCccccCHHHhcCCCCCch---hhHHHHHHHHHHHHhCCCCcccccccc
Confidence 99999999987643322110 11122245689999999999998876554 99999999998211110 0
Q ss_pred cch-------hhccc------cCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCC
Q 041467 676 KSI-------LKSAG------IKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPS 722 (746)
Q Consensus 676 ~~i-------~~~~~------~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~ 722 (746)
..+ ....+ .+.....+.+..++..|+...|. ||+..++...++.+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 268 VAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 000 00000 00113333455555555555666 8899988877776543
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-33 Score=298.09 Aligned_cols=179 Identities=22% Similarity=0.258 Sum_probs=150.5
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhhh----hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCC
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLKQ----KEASRSFAAEFNALRNI-RHRNLIKIITICSSID 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~ 541 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46799999999999999995 8999886432 22345678899999999 6999999999999999
Q ss_pred cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 542 FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
..++||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 999999999999986 45789999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .......+||+.|+|||++.+... .++.++|||||||++|
T Consensus 210 ~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~DvwslG~il~ 253 (355)
T 1vzo_A 210 VADE-------TERAYDFCGTIEYMAPDIVRGGDS-GHDKAVDWWSLGVLMY 253 (355)
T ss_dssp CGGG-------GGGGCGGGSCCTTCCHHHHTTCC----CTHHHHHHHHHHHH
T ss_pred ccCC-------CCcccCcccCcCccChhhhcCCCC-CCCchhhHHHHHHHHH
Confidence 3211 122334689999999999986432 1244699999999998
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-32 Score=283.39 Aligned_cols=176 Identities=20% Similarity=0.340 Sum_probs=151.4
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.++|+..+.||+|+||.||+ ||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 46788899999999999996 89999865432 3467899999999999999999999999999999999999
Q ss_pred cCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 551 SNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 551 ~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~----- 157 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD----- 157 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH-----
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc-----
Confidence 999886 24589999999999999999999999 9999999999999999999999999999865321
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.........||..|+|||++.+..++. ++||||+||++|
T Consensus 158 --~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 196 (267)
T 3t9t_A 158 --QYTSSTGTKFPVKWASPEVFSFSRYSS---KSDVWSFGVLMW 196 (267)
T ss_dssp --HHHSTTSTTCCGGGCCHHHHHHCCCCH---HHHHHHHHHHHH
T ss_pred --cccccccccccccccChhhhcCCCccc---hhchhhhHHHHH
Confidence 111223356788999999998777655 499999999998
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-33 Score=292.08 Aligned_cols=230 Identities=20% Similarity=0.260 Sum_probs=165.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 446799999999999999997 899988643 23445678999999999999999999999999999999
Q ss_pred hhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 546 DFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 546 v~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
||||+.+|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 99999999885 34589999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc------------ccchhhc---
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ------------NKSILKS--- 681 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~------------~~~i~~~--- 681 (746)
.... .......||+.|+|||++.+..++.+ +|||||||++|...... .......
T Consensus 187 ~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 255 (310)
T 2wqm_A 187 SSKT--------TAAHSLVGTPYYMSPERIHENGYNFK---SDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY 255 (310)
T ss_dssp --------------------CCSSCCHHHHTTCCCCHH---HHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCS
T ss_pred cCCC--------ccccccCCCeeEeChHHhCCCCCCch---hhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccC
Confidence 3221 11223578999999999988776554 99999999998211110 0000111
Q ss_pred cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 682 AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
.+.+.....+.+..++..|+...|. ||+..++...+.++-
T Consensus 256 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 256 PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 1111123344555555556666666 888887776666543
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-32 Score=290.48 Aligned_cols=233 Identities=20% Similarity=0.301 Sum_probs=164.4
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE------------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN------------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI 540 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~ 540 (746)
+....++|...+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 334567889999999999999994 8999886542 34456799999999999999999999999876
Q ss_pred Cc-----ccchhhhccCCccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 541 DF-----EGFDFKAISNGQLR-----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 541 ~~-----~~lv~e~~~~g~l~-----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
+. .++||||+++|++. ...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCc
Confidence 53 48999999999885 24589999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------cc
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NK 676 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~ 676 (746)
+||+|||+++........ .......|++.|+|||++.+..++.+ +|||||||++|.... .. ..
T Consensus 186 ~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~el~~~g~~p~~~~~~~ 256 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYY------RQGRIAKMPVKWIAIESLADRVYTSK---SDVWAFGVTMWEIATRGMTPYPGVQNH 256 (313)
T ss_dssp EEECSCSCC----------------------CCGGGSCHHHHHSSCCCHH---HHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred EEEeecCcceeccccccc------CcccccCCCccccCchhhcCCCccch---hhhHHHHHHHHHHHhcCCCCCccCCHH
Confidence 999999999876432211 11223557889999999988777554 999999999982221 10 01
Q ss_pred chh----hc-cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 677 SIL----KS-AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 677 ~i~----~~-~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
.+. .. .........+.+..++..|+...|. ||+..++...+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 257 EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111 10 1111233345555666666666666 7887766654443
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-32 Score=287.60 Aligned_cols=180 Identities=16% Similarity=0.244 Sum_probs=151.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||||++.... ..+.+.+|+++++++ +||||+++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 45799999999999999997 8999875332 334588999999999 79999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc-----EEEcccccccccc
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV-----THVGDLGLAKFLY 617 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~ki~DfGla~~~~ 617 (746)
|+ +|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||+|+...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 88886 34689999999999999999999999 9999999999999987776 9999999998775
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....... ..........||+.|+|||++.+..++.+ +|||||||++|
T Consensus 163 ~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ 209 (298)
T 1csn_A 163 DPVTKQH-IPYREKKNLSGTARYMSINTHLGREQSRR---DDLEALGHVFM 209 (298)
T ss_dssp CTTTCCB-CCCCCCCCCCSCTTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred ccccccc-ccccCccCCCCCcccCCchhhcCCCCChH---HHHHHHHHHHH
Confidence 4332111 01112345789999999999988777554 99999999998
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-32 Score=282.79 Aligned_cols=175 Identities=25% Similarity=0.298 Sum_probs=148.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh------hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQK------EASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~------~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.++|+..+.||+|+||.||+ ||||++..... ...+.+.+|++++++++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 35688999999999999997 89998764321 1356799999999999999999999999999999
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC----cEEEccccccc
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV----VTHVGDLGLAK 614 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~----~~ki~DfGla~ 614 (746)
++||||++++++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++ .+||+|||+++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999986 45789999999999999999999999 999999999999998877 89999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ......||+.|+|||++.+..++. ++||||+||++|
T Consensus 161 ~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 202 (283)
T 3bhy_A 161 KIEAGN---------EFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVITY 202 (283)
T ss_dssp ECC-----------------CCCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred eccCCC---------cccccCCCcCccCcceecCCCCCc---chhhhhHHHHHH
Confidence 753221 122356899999999998776654 599999999998
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-33 Score=289.07 Aligned_cols=178 Identities=21% Similarity=0.356 Sum_probs=153.6
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
...++|+..+.||+|+||.||+ ||||++... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 3567889999999999999997 899988643 234567899999999999999999999999999999999
Q ss_pred hhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 548 KAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 548 e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 999999885 34589999999999999999999999 99999999999999999999999999998764321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. .......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 166 ~-------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 203 (288)
T 3kfa_A 166 Y-------TAHAGAKFPIKWTAPESLAYNKFSIK---SDVWAFGVLLW 203 (288)
T ss_dssp S-------EEETTEEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred c-------ccccCCccccCcCChhhhccCCCCch---hhHHHHHHHHH
Confidence 1 22233567889999999988777554 99999999988
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-32 Score=285.01 Aligned_cols=177 Identities=21% Similarity=0.318 Sum_probs=148.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 456889999999999999996 799988654 23445779999999999999999999999865 4568
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+||||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999986 34589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... .......||+.|+|||++.+..++.+ +|||||||++|
T Consensus 166 ~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 205 (281)
T 3cc6_A 166 EDY-------YKASVTRLPIKWMSPESINFRRFTTA---SDVWMFAVCMW 205 (281)
T ss_dssp --------------CCCCCGGGCCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred ccc-------cccccCCCCcceeCchhhccCCCCch---hccHHHHHHHH
Confidence 221 11223557889999999987776554 99999999998
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-32 Score=290.18 Aligned_cols=186 Identities=22% Similarity=0.231 Sum_probs=146.1
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhc--CCCCceeeEEEEEecC----Cc
Q 041467 476 SKATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRN--IRHRNLIKIITICSSI----DF 542 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~~~~~~~----~~ 542 (746)
....++|+..+.||+|+||.||+ ||||++.... ...+.+|.+++.. ++||||+++++++... ..
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred cccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 34557899999999999999997 9999985332 2334455555544 5899999999999887 67
Q ss_pred ccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 543 EGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHC-----QPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 543 ~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~-----~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
.++||||+++|+|. ...+++.++..++.|++.|++|||+.+ .++|+||||||+||+++.++.+||+|||+|
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence 89999999999986 457899999999999999999999762 348999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccC---CCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENR---EKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~---~~~~DiwSlG~i~~ 668 (746)
+........ .........||+.|+|||++.+...... +.++|||||||++|
T Consensus 190 ~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~ 243 (337)
T 3mdy_A 190 VKFISDTNE----VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILW 243 (337)
T ss_dssp EECC-------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHH
T ss_pred eeecccccc----ccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHH
Confidence 876433221 1111234679999999999987655332 12489999999998
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-32 Score=283.40 Aligned_cols=178 Identities=19% Similarity=0.212 Sum_probs=143.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 457899999999999999997 8999986543 2334678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||+++++|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999886 35689999999999999999999999 99999999999999999999999999997653321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. .......||+.|+|||++.+..++. ++|||||||++|
T Consensus 189 ~-------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 226 (309)
T 2h34_A 189 L-------TQLGNTVGTLYYMAPERFSESHATY---RADIYALTCVLY 226 (309)
T ss_dssp ---------------CCGGGCCGGGTCC----C---CCHHHHHHHHHH
T ss_pred c-------ccccccCCCcCccCHHHHcCCCCCc---hHhHHHHHHHHH
Confidence 1 1122467899999999998876655 499999999998
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-32 Score=296.39 Aligned_cols=178 Identities=21% Similarity=0.282 Sum_probs=144.8
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhh--hhhhHHHHHHHHHhhcCC--CCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQ--KEASRSFAAEFNALRNIR--HRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~--~~~~~~~~~E~~~l~~l~--HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.+|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++ |||||++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4699999999999999997 8999886442 345577999999999997 599999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
| +.+|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+|+.+.....
T Consensus 136 E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~- 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT- 209 (390)
T ss_dssp E-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred e-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc-
Confidence 9 5677775 45789999999999999999999999 999999999999996 58999999999987643221
Q ss_pred CCccccccccccccccccccccccccccc--------ccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNL--------ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~--------~~~~~~~DiwSlG~i~~ 668 (746)
.......+||+.|||||++.+... ..++.++|||||||++|
T Consensus 210 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ 258 (390)
T 2zmd_A 210 -----SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 258 (390)
T ss_dssp ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHH
T ss_pred -----cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHH
Confidence 111234679999999999976311 12355699999999999
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-32 Score=283.73 Aligned_cols=181 Identities=19% Similarity=0.278 Sum_probs=147.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh----hhhhHHHHHHHHHhhcCCCCceeeEEEEEec--CCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ----KEASRSFAAEFNALRNIRHRNLIKIITICSS--IDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~ 542 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 347899999999999999997 8999986543 2345679999999999999999999999854 457
Q ss_pred ccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 543 EGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 543 ~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
.++||||+.+|... ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 83 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 83 MYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 89999999877322 45689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... .......||+.|+|||++.+.... .+.++||||+||++|
T Consensus 160 ~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~-~~~~~Di~slG~il~ 204 (305)
T 2wtk_C 160 HPFAAD------DTCRTSQGSPAFQPPEIANGLDTF-SGFKVDIWSAGVTLY 204 (305)
T ss_dssp CTTCSS------CEECCCCSCGGGCCHHHHTCCSCE-ESHHHHHHHHHHHHH
T ss_pred Cccccc------cccccCCCCCCCcChhhccCcccC-CcchhhHHHHHHHHH
Confidence 432211 122346799999999999764321 134699999999998
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-32 Score=293.76 Aligned_cols=183 Identities=19% Similarity=0.261 Sum_probs=154.3
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEE
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITIC 537 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~ 537 (746)
++....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 3444567899999999999999996 7888876442 33456799999999999 899999999999
Q ss_pred ecCCcccchhhhccCCccc-------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCee
Q 041467 538 SSIDFEGFDFKAISNGQLR-------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598 (746)
Q Consensus 538 ~~~~~~~lv~e~~~~g~l~-------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NIL 598 (746)
...+..++||||+++|+|. ...+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence 9999999999999999885 12478999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 599 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++.++.+||+|||+++........ .......||+.|+|||++.+..++.+ +|||||||++|
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 257 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNY------IVKGNARLPVKWMAPESIFDCVYTVQ---SDVWSYGILLW 257 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTS------EECSSCEECGGGSCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred ECCCCeEEECccccccccccccce------eecCCCCCCccccCHHHhccCCCChH---HHHHHHHHHHH
Confidence 999999999999999876432211 11223567889999999988776554 99999999998
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-32 Score=285.50 Aligned_cols=177 Identities=20% Similarity=0.272 Sum_probs=154.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
..+.|+..+.||+|+||.||+ ||||++.... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 345688999999999999997 8999986543 334577999999999999999999999999999999999
Q ss_pred hhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 548 KAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 548 e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 100 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 174 (303)
T 3a7i_A 100 EYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-- 174 (303)
T ss_dssp ECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC--
T ss_pred EeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccc--
Confidence 999998886 45789999999999999999999999 999999999999999999999999999987643211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+..++. ++|||||||++|
T Consensus 175 ------~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 210 (303)
T 3a7i_A 175 ------KRNTFVGTPFWMAPEVIKQSAYDS---KADIWSLGITAI 210 (303)
T ss_dssp ------CBCCCCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred ------ccCccCCCcCccCHHHHhcCCCCc---hhhhHHHHHHHH
Confidence 123467899999999998877655 499999999998
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-32 Score=287.60 Aligned_cols=172 Identities=19% Similarity=0.296 Sum_probs=147.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEec--CCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSS--IDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~--~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.. ...+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 46799999999999999997 89999863 33467899999999997 9999999999988 5578999
Q ss_pred hhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC-cEEEccccccccccCCCCCC
Q 041467 547 FKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV-VTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 547 ~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~-~~ki~DfGla~~~~~~~~~~ 623 (746)
|||+.++++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+|+......
T Consensus 112 ~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--- 185 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--- 185 (330)
T ss_dssp EECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC---
T ss_pred EeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC---
Confidence 9999999886 45689999999999999999999999 999999999999999766 89999999998753221
Q ss_pred Cccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
......||..|+|||++.+. .+ +.++||||+||++|
T Consensus 186 ------~~~~~~~~~~y~aPE~~~~~~~~---~~~~DiwslG~il~ 222 (330)
T 3nsz_A 186 ------EYNVRVASRYFKGPELLVDYQMY---DYSLDMWSLGCMLA 222 (330)
T ss_dssp ------CCCSCCSCGGGCCHHHHTTCCCC---CTHHHHHHHHHHHH
T ss_pred ------ccccccccccccChhhhcCCCcC---CchhhHHHHHHHHH
Confidence 12235789999999999773 34 34699999999998
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-32 Score=280.87 Aligned_cols=174 Identities=24% Similarity=0.318 Sum_probs=145.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|...+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 46788999999999999996 8999886543 2345779999999999999999999999999999999999
Q ss_pred hccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee---CCCCcEEEccccccccc
Q 041467 549 AISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 549 ~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DfGla~~~ 616 (746)
|+++|++. ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999885 25689999999999999999999999 99999999999999 45688999999999865
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... ......||+.|+|||++.+ .++ .++||||+||++|
T Consensus 178 ~~~~---------~~~~~~~t~~y~aPE~~~~-~~~---~~~Di~slG~il~ 216 (285)
T 3is5_A 178 KSDE---------HSTNAAGTALYMAPEVFKR-DVT---FKCDIWSAGVVMY 216 (285)
T ss_dssp ------------------CTTGGGCCHHHHTT-CCC---HHHHHHHHHHHHH
T ss_pred CCcc---------cCcCcccccCcCChHHhcc-CCC---cccCeehHHHHHH
Confidence 3221 1234678999999999864 343 4599999999998
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-32 Score=299.38 Aligned_cols=175 Identities=22% Similarity=0.315 Sum_probs=148.5
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC--cccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID--FEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~--~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 46789999999999999997 8999987543 334567889999999999999999999998765 67899
Q ss_pred hhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee----CCCCcEEEccccccc
Q 041467 547 FKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL----DQDVVTHVGDLGLAK 614 (746)
Q Consensus 547 ~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl----~~~~~~ki~DfGla~ 614 (746)
|||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+|+
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 9999999885 12289999999999999999999999 99999999999999 778889999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccc--------cccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA--------RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .......||+.|+|||++.+ ..++ .++|||||||++|
T Consensus 165 ~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~---~~~DiwSlG~il~ 214 (396)
T 4eut_A 165 ELEDD---------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYG---ATVDLWSIGVTFY 214 (396)
T ss_dssp ECCCG---------GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHH---HHHHHHHHHHHHH
T ss_pred EccCC---------CccccccCCccccCHHHhhccccccccccCCC---cHHHHHHHHHHHH
Confidence 75321 12234679999999999875 3343 3599999999998
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-32 Score=284.89 Aligned_cols=175 Identities=25% Similarity=0.338 Sum_probs=149.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..++|...+.||+|+||.||+ ||||++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 346788999999999999996 89999875544445678999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee---CCCCcEEEccccccccccCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DfGla~~~~~~~ 620 (746)
|+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 87 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~-- 161 (304)
T 2jam_A 87 LVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN-- 161 (304)
T ss_dssp CCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC--
T ss_pred cCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC--
Confidence 99999885 45689999999999999999999999 99999999999999 7889999999999875321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+..++. ++||||+||++|
T Consensus 162 --------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 198 (304)
T 2jam_A 162 --------GIMSTACGTPGYVAPEVLAQKPYSK---AVDCWSIGVITY 198 (304)
T ss_dssp --------BTTHHHHSCCCBCCTTTBSSCSCCH---HHHHHHHHHHHH
T ss_pred --------CccccccCCCCccChHHhccCCCCc---hhhHHHHHHHHH
Confidence 1122357899999999998877655 499999999998
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.7e-32 Score=303.30 Aligned_cols=175 Identities=24% Similarity=0.332 Sum_probs=148.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh-------------hhhHHHHHHHHHhhcCCCCceeeEEE
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQK-------------EASRSFAAEFNALRNIRHRNLIKIIT 535 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~HpnIv~l~~ 535 (746)
..++|+..+.||+|+||.||+ ||||++..... ...+.+.+|++++++++|||||++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 457899999999999999996 89999864321 23467899999999999999999999
Q ss_pred EEecCCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC---cEEE
Q 041467 536 ICSSIDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV---VTHV 607 (746)
Q Consensus 536 ~~~~~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~---~~ki 607 (746)
++.+....++|||||++|++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEE
Confidence 999999999999999999985 46799999999999999999999999 999999999999998765 6999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+|||+|+..... ......+||+.|+|||++.+ .+ +.++||||+||++|
T Consensus 191 ~Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~-~~---~~~~DiwslG~il~ 238 (504)
T 3q5i_A 191 VDFGLSSFFSKD---------YKLRDRLGTAYYIAPEVLKK-KY---NEKCDVWSCGVIMY 238 (504)
T ss_dssp CCCTTCEECCTT---------SCBCCCCSCTTTCCHHHHTT-CB---CTHHHHHHHHHHHH
T ss_pred EECCCCEEcCCC---------CccccccCCcCCCCHHHhcc-CC---CchHHHHHHHHHHH
Confidence 999999876322 12234679999999999874 34 44699999999998
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=289.25 Aligned_cols=182 Identities=26% Similarity=0.361 Sum_probs=153.7
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--------hhhhHHHHHHHHHhhcC-CCCceeeEEEE
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--------KEASRSFAAEFNALRNI-RHRNLIKIITI 536 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~HpnIv~l~~~ 536 (746)
.....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 344557899999999999999997 8999875432 22345688999999999 79999999999
Q ss_pred EecCCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 537 CSSIDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 537 ~~~~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
+...+..++||||+++|++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG 245 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFG 245 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecC
Confidence 99999999999999999986 45789999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccc---cccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN---LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~~~~~DiwSlG~i~~ 668 (746)
++..+.... .....+||+.|+|||++.+.. ...++.++|||||||++|
T Consensus 246 ~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ 296 (365)
T 2y7j_A 246 FSCHLEPGE---------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296 (365)
T ss_dssp TCEECCTTC---------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHH
T ss_pred cccccCCCc---------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHH
Confidence 998764321 123467999999999987542 112355699999999998
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-32 Score=285.86 Aligned_cols=234 Identities=18% Similarity=0.201 Sum_probs=169.8
Q ss_pred HHhhhhcCCCCCC-eEeecCCeeEEE-----------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEec
Q 041467 474 ELSKATNNFSPAN-KIREGGFNIVYN-----------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSS 539 (746)
Q Consensus 474 ~~~~~~~~~~~~~-~ig~g~~g~v~~-----------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~ 539 (746)
++....++|...+ .||+|+||.||+ ||||++.... ....+.+.+|+++++.++||||+++++++ .
T Consensus 10 ~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~ 88 (291)
T 1xbb_A 10 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E 88 (291)
T ss_dssp -CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred eeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence 3334456788877 999999999996 8899886543 23356799999999999999999999999 5
Q ss_pred CCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccc
Q 041467 540 IDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~ 614 (746)
.+..++||||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 56788999999999886 45689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c------cch---hhc--
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N------KSI---LKS-- 681 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~------~~i---~~~-- 681 (746)
........ ........||+.|+|||++.+..++.+ +|||||||++|.... .. . ..+ ...
T Consensus 166 ~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~ 237 (291)
T 1xbb_A 166 ALRADENY-----YKAQTHGKWPVKWYAPECINYYKFSSK---SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 237 (291)
T ss_dssp ECCTTCSE-----EEC----CCCGGGCCHHHHHHCEEEHH---HHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC
T ss_pred eeccCCCc-----ccccccCCCCceeeChHHhccCCCChh---hhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence 76432211 111223456789999999988777655 999999999983221 11 0 000 000
Q ss_pred cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 682 AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
.........+.+..++..|+...|. ||+..++...++.
T Consensus 238 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 276 (291)
T 1xbb_A 238 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 276 (291)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 0111123334455555555555565 7777766554443
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-32 Score=289.92 Aligned_cols=187 Identities=22% Similarity=0.286 Sum_probs=155.3
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeE
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKI 533 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l 533 (746)
+....+....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34455556678999999999999999995 7899886543 33456789999999999 69999999
Q ss_pred EEEEecCC-cccchhhhccCCccc-----cc----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcC
Q 041467 534 ITICSSID-FEGFDFKAISNGQLR-----LC----------------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGD 591 (746)
Q Consensus 534 ~~~~~~~~-~~~lv~e~~~~g~l~-----~~----------------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrD 591 (746)
++++...+ ..++||||+++|+|. .. .+++.++..++.|++.|++|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99988755 589999999999885 11 178999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 592 LKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 592 lkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|||+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.+ +||||+||++|
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~ 241 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQ---SDVWSFGVLLW 241 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTT------SEEETTEEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred CccceEEECCCCCEEECCCccccccccCcc------ceeccCCCcceeecCchhhccccccch---hHHHHHHHHHH
Confidence 999999999999999999999987643221 112234668899999999988777654 99999999998
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=269.55 Aligned_cols=224 Identities=20% Similarity=0.262 Sum_probs=165.7
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
+.|++|+|++|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+. .+|..+.
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~---------- 120 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP---------- 120 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC----------
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc----------
Confidence 67999999999999877779999999999999999999888999999999999999999985 4554332
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCccc-----ccCCCCCcEeeCccCcccc--cCCccccCCCCCCEEEccCCCCCCCCC
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLS-----LSNASSLEMIEFSRNQFSG--GVSVDFSRLKNLSWLNLGVNNLGSGTA 170 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 170 (746)
++|+.|++++|++.. +.++++|+.|++++|+++. ..+..|..+++|++|++++|.++..+
T Consensus 121 ------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~- 187 (330)
T 1xku_A 121 ------------KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIP- 187 (330)
T ss_dssp ------------TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCC-
T ss_pred ------------ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCC-
Confidence 345555666666532 4566777777777777643 55666777777777777777776532
Q ss_pred CCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCc
Q 041467 171 NELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP 250 (746)
Q Consensus 171 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 250 (746)
..+. ++|++|++++|++++..|..+..++ +|+.|++++|++++..+..|..+++|++|+|++|++. .+|.
T Consensus 188 ------~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 257 (330)
T 1xku_A 188 ------QGLP--PSLTELHLDGNKITKVDAASLKGLN-NLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG 257 (330)
T ss_dssp ------SSCC--TTCSEEECTTSCCCEECTGGGTTCT-TCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCT
T ss_pred ------cccc--ccCCEEECCCCcCCccCHHHhcCCC-CCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCCh
Confidence 2221 5777777777777766677777776 5777777777777666667777777777777777776 6666
Q ss_pred CCCCCCCCceeeccccccccccccc
Q 041467 251 LIGETPNLQLLNIGGNHLQGSILSS 275 (746)
Q Consensus 251 ~~~~l~~L~~L~Ls~N~l~~~~~~~ 275 (746)
.+..+++|++|++++|++++..+..
T Consensus 258 ~l~~l~~L~~L~l~~N~i~~~~~~~ 282 (330)
T 1xku_A 258 GLADHKYIQVVYLHNNNISAIGSND 282 (330)
T ss_dssp TTTTCSSCCEEECCSSCCCCCCTTS
T ss_pred hhccCCCcCEEECCCCcCCccChhh
Confidence 7777777777777777777544433
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-32 Score=291.63 Aligned_cols=175 Identities=19% Similarity=0.295 Sum_probs=151.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||+|++... .....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 45799999999999999997 899988654 23345679999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+++|+|. ...+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 185 (360)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc----
Confidence 99999986 357899999999999999999999842 7999999999999999999999999999765321
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 186 ------~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ 221 (360)
T 3eqc_A 186 ------MANSFVGTRSYMSPERLQGTHYSVQ---SDIWSMGLSLV 221 (360)
T ss_dssp ------C----CCCCTTCCHHHHTTCCCSHH---HHHHHHHHHHH
T ss_pred ------cccCCCCCCCeECHHHHcCCCCCch---hhHHHHHHHHH
Confidence 1223679999999999988877554 99999999998
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-32 Score=291.39 Aligned_cols=183 Identities=22% Similarity=0.232 Sum_probs=150.4
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC---
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID--- 541 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~--- 541 (746)
+....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 22 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 101 (364)
T 3qyz_A 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101 (364)
T ss_dssp BCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTT
T ss_pred eccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccc
Confidence 334557899999999999999997 8999986432 334567899999999999999999999997653
Q ss_pred --cccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 542 --FEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 542 --~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
..++||||+.+ ++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 102 ~~~~~iv~e~~~~-~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 177 (364)
T 3qyz_A 102 MKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 177 (364)
T ss_dssp CCCEEEEEECCSE-EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred cceEEEEEcccCc-CHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence 57899999974 554 45799999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....... .......+||+.|+|||++.+... ++.++||||+||++|
T Consensus 178 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 223 (364)
T 3qyz_A 178 ADPDHDH-----TGFLTEYVATRWYRAPEIMLNSKG--YTKSIDIWSVGCILA 223 (364)
T ss_dssp CCGGGCB-----CCTTCCCCSCGGGCCHHHHHTBCS--CSTHHHHHHHHHHHH
T ss_pred cCCCCCc-----cccccccccccCCCCCHHhcCCCC--CCcchhHHHHHHHHH
Confidence 6432111 111234689999999999865542 234699999999998
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-32 Score=289.34 Aligned_cols=177 Identities=22% Similarity=0.313 Sum_probs=147.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 456899999999999999996 8999875432 23355688999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+.++.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 178 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 178 (331)
T ss_dssp EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence 9999988775 45689999999999999999999999 99999999999999999999999999998653321
Q ss_pred CCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+. .+ +.++||||+||++|
T Consensus 179 -------~~~~~~~~t~~y~aPE~~~~~~~~---~~~~Di~slG~il~ 216 (331)
T 4aaa_A 179 -------EVYDDEVATRWYRAPELLVGDVKY---GKAVDVWAIGCLVT 216 (331)
T ss_dssp ------------CCCCCTTCCHHHHTTCTTC---CTHHHHHHHHHHHH
T ss_pred -------cccCCCcCCccccCcccccCCCCc---chHHHHHHHHHHHH
Confidence 112235789999999999875 34 34699999999998
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-32 Score=312.40 Aligned_cols=221 Identities=17% Similarity=0.220 Sum_probs=166.7
Q ss_pred eEeecCCeeEEE-----------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCc
Q 041467 487 KIREGGFNIVYN-----------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQ 554 (746)
Q Consensus 487 ~ig~g~~g~v~~-----------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~ 554 (746)
.||+|+||.||+ ||||+++... ....+.+.+|+++|++++|||||+++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 799999999995 8999987542 3356789999999999999999999999976 56899999999999
Q ss_pred cc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccc
Q 041467 555 LR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628 (746)
Q Consensus 555 l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~ 628 (746)
|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+...... .
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~-----~ 493 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY-----Y 493 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce-----e
Confidence 85 34589999999999999999999999 9999999999999999999999999999876432211 1
Q ss_pred cccccccccccccccccccccccccCCCccceeeccceeecccc--cc------ccchhh---c--cccCCCccHHHHHH
Q 041467 629 SSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQ------NKSILK---S--AGIKGKKTVSFFLS 695 (746)
Q Consensus 629 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~------~~~i~~---~--~~~~~~~~~~~~~~ 695 (746)
.......+|+.|+|||++.+..++.+ +|||||||++|.... .. ..++.. . .......+.+.+..
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~---sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~ 570 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSR---SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYA 570 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred eeccCCCCccceeCHhhhcCCCCCcH---HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHH
Confidence 11122346789999999988777655 999999999983221 11 011111 1 11122345567777
Q ss_pred hhCCCCCCCCC-CCCccchhhhccc
Q 041467 696 LLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 696 ~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
++..|+...|. ||++.++...++.
T Consensus 571 li~~cl~~dP~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 571 LMSDCWIYKWEDRPDFLTVEQRMRA 595 (613)
T ss_dssp HHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHHcCCChhHCcCHHHHHHHHHH
Confidence 78888888887 9998876655443
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-32 Score=284.10 Aligned_cols=176 Identities=19% Similarity=0.292 Sum_probs=147.5
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEec--CCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSS--IDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~~~l 545 (746)
.++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+ ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 56899999999999999997 8999886432 3345679999999999999999999998854 557899
Q ss_pred hhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 546 DFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS-----IVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 546 v~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~-----ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
||||+++|+|. ...+++.++..++.|++.|++|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999886 23489999999999999999999999 7 9999999999999999999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+++...... .......||+.|+|||++.+..++. ++||||+||++|
T Consensus 162 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 207 (279)
T 2w5a_A 162 LARILNHDT--------SFAKTFVGTPYYMSPEQMNRMSYNE---KSDIWSLGCLLY 207 (279)
T ss_dssp HHHHC---C--------HHHHHHHSCCTTCCHHHHHCC-CCH---HHHHHHHHHHHH
T ss_pred hheeecccc--------ccccccCCCccccChHHhccCCCCc---hhhHHHHHHHHH
Confidence 998753211 1122357899999999998877655 499999999998
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-32 Score=287.03 Aligned_cols=178 Identities=21% Similarity=0.304 Sum_probs=144.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--------hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--------KEASRSFAAEFNALRNIRHRNLIKIITICSSI 540 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--------~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~ 540 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 346799999999999999996 8999886432 12234588999999999999999999998765
Q ss_pred CcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc---EEEccccc
Q 041467 541 DFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV---THVGDLGL 612 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~---~ki~DfGl 612 (746)
. .++||||+++|++. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred c-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 5 79999999999885 45789999999999999999999999 9999999999999986654 99999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++..... .......||+.|+|||++.+.....++.++|||||||++|
T Consensus 164 ~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ 210 (322)
T 2ycf_A 164 SKILGET---------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210 (322)
T ss_dssp CEECCCC---------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHH
T ss_pred ceecccc---------cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHH
Confidence 9875321 1122467999999999986432233455699999999998
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-32 Score=282.46 Aligned_cols=223 Identities=19% Similarity=0.264 Sum_probs=165.2
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
+.|.....||+|+||.||+ ||||++........+.+.+|+.+++.++|||||++++++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 3455667999999999997 8999987655555678999999999999999999999999999999999999
Q ss_pred cCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-CCcEEEccccccccccCCCC
Q 041467 551 SNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-DVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 551 ~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DfGla~~~~~~~~ 621 (746)
++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999885 12457889999999999999999999 9999999999999987 89999999999987633211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc---------ccch-----hhccccCCC
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ---------NKSI-----LKSAGIKGK 687 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~---------~~~i-----~~~~~~~~~ 687 (746)
......||+.|+|||++.+... .++.++|||||||++|...... ...+ ....+....
T Consensus 179 --------~~~~~~~~~~y~aPE~~~~~~~-~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 249 (295)
T 2clq_A 179 --------CTETFTGTLQYMAPEIIDKGPR-GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE 249 (295)
T ss_dssp ----------CCCCCCGGGCCHHHHHHGGG-GCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCT
T ss_pred --------cccccCCCccccChhhhcCCCC-CCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccc
Confidence 1223678999999999976531 1234599999999998211110 0000 111112223
Q ss_pred ccHHHHHHhhCCCCCCCCC-CCCccchh
Q 041467 688 KTVSFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
...+.+..++..|+...|+ ||+..++.
T Consensus 250 ~~~~~~~~li~~~l~~dp~~Rps~~~ll 277 (295)
T 2clq_A 250 SMSAEAKAFILKCFEPDPDKRACANDLL 277 (295)
T ss_dssp TSCHHHHHHHHHTTCSSTTTSCCHHHHH
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 3445555566666666666 77776543
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-32 Score=288.68 Aligned_cols=179 Identities=22% Similarity=0.312 Sum_probs=151.4
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC--cc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID--FE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~--~~ 543 (746)
.++|+..+.||+|+||.||+ ||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 45688999999999999985 7999987655556678999999999999999999999987754 68
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 8999999999986 24589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ........||..|+|||++.+..++.+ +||||+||++|
T Consensus 197 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 239 (326)
T 2w1i_A 197 QDKEY-----YKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLY 239 (326)
T ss_dssp SSCSE-----EECSSCCSCCGGGCCHHHHHHCEEEHH---HHHHHHHHHHH
T ss_pred ccccc-----cccccCCCCceeEECchhhcCCCCCch---hhHHHHHHHHH
Confidence 32211 111223457888999999988777655 99999999998
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-32 Score=282.58 Aligned_cols=229 Identities=18% Similarity=0.216 Sum_probs=171.0
Q ss_pred hcCCCCCC-eEeecCCeeEEE-----------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPAN-KIREGGFNIVYN-----------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~-~ig~g~~g~v~~-----------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
.++|...+ .||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 34566665 999999999996 8999886532 34566799999999999999999999999 4567899
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 99999999885 34589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c------cc----hhh-ccccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N------KS----ILK-SAGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~------~~----i~~-~~~~~~ 686 (746)
... ........||+.|+|||++.+..++.+ +||||+||++|.... .. . .. +.. ..+...
T Consensus 164 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~ 235 (287)
T 1u59_A 164 DSY-----YTARSAGKWPLKWYAPECINFRKFSSR---SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 235 (287)
T ss_dssp SCE-----ECCCCSSCCCGGGCCHHHHHHCEECHH---HHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCC
T ss_pred cce-----eeccccccccccccCHHHhccCCCCch---hhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCC
Confidence 211 111223457899999999987776554 999999999983221 11 0 00 100 011112
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
....+.+..++..|+...|. ||+..++...+..
T Consensus 236 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 269 (287)
T 1u59_A 236 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 269 (287)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 33445555666666666666 7887766654443
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-32 Score=285.23 Aligned_cols=171 Identities=20% Similarity=0.335 Sum_probs=146.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec----------
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS---------- 539 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~---------- 539 (746)
..+|+..+.||+|+||.||+ ||||++.... +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 45788999999999999997 8999886432 347789999999999999999998865
Q ss_pred ------CCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEE
Q 041467 540 ------IDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTH 606 (746)
Q Consensus 540 ------~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~k 606 (746)
....++||||+++|+|. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEE
Confidence 33578999999999986 24689999999999999999999999 999999999999999999999
Q ss_pred EccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 607 VGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 607 i~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+|||+++...... ......||+.|+|||++.+..++. ++||||+||++|
T Consensus 163 l~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 212 (284)
T 2a19_B 163 IGDFGLVTSLKNDG---------KRTRSKGTLRYMSPEQISSQDYGK---EVDLYALGLILA 212 (284)
T ss_dssp ECCCTTCEESSCCS---------CCCCCCSCCTTSCHHHHHCSCCCT---HHHHHHHHHHHH
T ss_pred ECcchhheeccccc---------cccccCCcccccChhhhccCCCcc---hhhhHHHHHHHH
Confidence 99999998764321 122356899999999998877654 599999999998
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=278.53 Aligned_cols=172 Identities=21% Similarity=0.333 Sum_probs=145.3
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEec----CCccc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSS----IDFEG 544 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----~~~~~ 544 (746)
..|...+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 3477788999999999997 8899876442 3445679999999999999999999999876 34588
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCeeeC-CCCcEEEccccccccc
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS--IVHGDLKPSNILLD-QDVVTHVGDLGLAKFL 616 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivHrDlkp~NILl~-~~~~~ki~DfGla~~~ 616 (746)
+||||+++|+|. ...+++..+..++.|++.|++|||+. + |+||||||+||+++ .++.+||+|||++...
T Consensus 106 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999986 36789999999999999999999999 7 99999999999997 7899999999999754
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ......||+.|+|||++.+. + +.++||||+||++|
T Consensus 183 ~~~----------~~~~~~~t~~y~aPE~~~~~-~---~~~~Di~slG~~l~ 220 (290)
T 1t4h_A 183 RAS----------FAKAVIGTPEFMAPEMYEEK-Y---DESVDVYAFGMCML 220 (290)
T ss_dssp CTT----------SBEESCSSCCCCCGGGGGTC-C---CTHHHHHHHHHHHH
T ss_pred ccc----------ccccccCCcCcCCHHHHhcc-C---CCcchHHHHHHHHH
Confidence 221 12236799999999988643 4 44699999999998
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-32 Score=282.58 Aligned_cols=230 Identities=17% Similarity=0.290 Sum_probs=171.1
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
+....++|+..+.||+|+||.||+ ||||++.... ...+.+.+|++++++++||||+++++++.. +..++|
T Consensus 8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v 85 (279)
T 1qpc_A 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85 (279)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred cccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEE
Confidence 334457889999999999999996 8999886432 235679999999999999999999999864 568899
Q ss_pred hhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 547 FKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 547 ~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
|||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 9999999986 12689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchh----hc-cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSIL----KS-AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~----~~-~~~~~ 686 (746)
.. .......||..|+|||++.+..++.+ +||||+||++|.... .. ...+. .. .....
T Consensus 163 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 232 (279)
T 1qpc_A 163 EY-------TAREGAKFPIKWTAPEAINYGTFTIK---SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 232 (279)
T ss_dssp CE-------ECCTTCCCCTTTSCHHHHHHCEECHH---HHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC
T ss_pred cc-------ccccCCCCccCccChhhhccCCCCch---hhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCc
Confidence 11 11223557889999999987776554 999999999983221 11 00111 00 11111
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
....+.+..++..|....|. ||+..++...++.
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 266 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 23334444555555555555 7787766654443
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-32 Score=291.27 Aligned_cols=173 Identities=19% Similarity=0.284 Sum_probs=144.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc---
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE--- 543 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~--- 543 (746)
..++|...+.||+|+||.||+ ||||++... .....+.+.+|+++++.++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 346889999999999999997 899998643 233456789999999999999999999999887654
Q ss_pred ---cchhhhccCCccc---ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 ---GFDFKAISNGQLR---LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ---~lv~e~~~~g~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+. |++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+...
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred eeEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 89999997 4554 45689999999999999999999999 99999999999999999999999999998642
Q ss_pred CCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
. .....+||+.|+|||++.+ ..++ .++||||+||++|
T Consensus 196 ~-----------~~~~~~~t~~y~aPE~~~~~~~~~---~~~DiwslG~il~ 233 (371)
T 4exu_A 196 A-----------EMTGYVVTRWYRAPEVILSWMHYN---QTVDIWSVGCIMA 233 (371)
T ss_dssp ---------------CTTCCCTTSCHHHHSCCSCCC---TTHHHHHHHHHHH
T ss_pred c-----------CcCCcccCccccCHHHhcCCCCCC---cHHhHHHHHHHHH
Confidence 2 1234678999999999987 4444 4599999999998
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-32 Score=289.49 Aligned_cols=227 Identities=22% Similarity=0.261 Sum_probs=166.6
Q ss_pred hcCCCCCCeEeecCCeeEEE-----------EEeehhhhh-hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-----------VAMKVANLK-QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-----------vavK~~~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~l 545 (746)
.++|+..+.||+|+||.||+ ||||++... .....+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 36788899999999999996 488887532 233456789999999999 89999999999999999999
Q ss_pred hhhhccCCccc-----c----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 546 DFKAISNGQLR-----L----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 546 v~e~~~~g~l~-----~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
||||+++|+|. . ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 99999999985 1 2589999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c------c
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N------K 676 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~------~ 676 (746)
+||+|||+++..... .......+|+.|+|||++.+..++.+ +||||+||++|.... .. . .
T Consensus 181 ~kL~Dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ellt~g~~pf~~~~~~ 248 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY---------VKKTMGRLPVRWMAIESLNYSVYTTN---SDVWSYGVLLWEIVSLGGTPYCGMTCA 248 (327)
T ss_dssp EEECCTTCEESSCEE---------CCC----CCTTTCCHHHHHHCEECHH---HHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred EEEcccCcCcccccc---------ccccCCCCCccccChhhhccccCCch---hcchHHHHHHHHHHcCCCCCCCCCcHH
Confidence 999999999753211 11223457889999999987776554 999999999983221 11 0 0
Q ss_pred chhhc-----cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 677 SILKS-----AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 677 ~i~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
.+... .........+.+..++..|+...|. ||+..++...+.++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 298 (327)
T 1fvr_A 249 ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298 (327)
T ss_dssp HHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11110 1111123334444555555555555 78887666555443
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-32 Score=290.48 Aligned_cols=182 Identities=19% Similarity=0.194 Sum_probs=143.6
Q ss_pred HHHHhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhh-----------hhhhHHHHHHHHHhhcCCCCceee
Q 041467 472 HAELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQ-----------KEASRSFAAEFNALRNIRHRNLIK 532 (746)
Q Consensus 472 ~~~~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~-----------~~~~~~~~~E~~~l~~l~HpnIv~ 532 (746)
.+++....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 456777889999999999999999997 8999875321 222467999999999999999999
Q ss_pred EEEEEecCC-----cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC
Q 041467 533 IITICSSID-----FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD 602 (746)
Q Consensus 533 l~~~~~~~~-----~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~ 602 (746)
+++++...+ ..++||||+.++.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 170 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADN 170 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTT
T ss_pred eeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCC
Confidence 999985533 568999999843332 33689999999999999999999999 99999999999999999
Q ss_pred CcEEEccccccccccCCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 603 VVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 603 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.+||+|||+++..... .......||+.|+|||++.+ ..+ +.++||||+||++|
T Consensus 171 ~~~kl~Dfg~~~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~---~~~~DiwslG~il~ 225 (362)
T 3pg1_A 171 NDITICDFNLAREDTAD---------ANKTHYVTHRWYRAPELVMQFKGF---TKLVDMWSAGCVMA 225 (362)
T ss_dssp CCEEECCTTC------------------------CGGGCCHHHHTTCTTC---CTHHHHHHHHHHHH
T ss_pred CCEEEEecCcccccccc---------cccceecccceecCcHHhcCCCCC---CcHhHHHhHHHHHH
Confidence 99999999999754221 12234678999999999987 444 44699999999998
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-32 Score=312.79 Aligned_cols=221 Identities=19% Similarity=0.213 Sum_probs=163.8
Q ss_pred CeEeecCCeeEEE-----------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN-----------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~-----------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||||+++... ....+.+.+|++++++++|||||+++++|.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999995 8999987543 2345789999999999999999999999965 557899999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+......
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~----- 525 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----- 525 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc-----
Confidence 9986 45689999999999999999999999 9999999999999999999999999999876433221
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c------cch---hhc--cccCCCccHHHHH
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N------KSI---LKS--AGIKGKKTVSFFL 694 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~------~~i---~~~--~~~~~~~~~~~~~ 694 (746)
........||+.|+|||++.+..++.+ +|||||||++|.... .. . ..+ +.. .......+.+.+.
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~---sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~ 602 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSK---SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY 602 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred cccccCCCCceeeeChhhhcCCCCCcH---HHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHH
Confidence 111223457889999999988777655 999999999983221 11 0 011 111 1111233445566
Q ss_pred HhhCCCCCCCCC-CCCccchhhhcc
Q 041467 695 SLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 695 ~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.++..|+...|+ ||++.++...++
T Consensus 603 ~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 603 DLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 666666666676 888876654443
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-32 Score=286.47 Aligned_cols=181 Identities=18% Similarity=0.228 Sum_probs=150.0
Q ss_pred HHHhhhhcCCCCC-CeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCC-CCceeeEEEEEec
Q 041467 473 AELSKATNNFSPA-NKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIR-HRNLIKIITICSS 539 (746)
Q Consensus 473 ~~~~~~~~~~~~~-~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~ 539 (746)
.......+.|... +.||+|+||.||+ ||||++.... ......+.+|+.++++++ ||||+++++++..
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~ 100 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN 100 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence 3344455667776 8999999999997 8999886543 233567899999999995 6999999999999
Q ss_pred CCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEcc
Q 041467 540 IDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGD 609 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~D 609 (746)
.+..++||||+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 101 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 101 TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEee
Confidence 99999999999999885 25689999999999999999999999 9999999999999987 78999999
Q ss_pred ccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 610 LGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 610 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
||+++...... ......||+.|+|||++.+..++. ++||||+||++|
T Consensus 178 fg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 224 (327)
T 3lm5_A 178 FGMSRKIGHAC---------ELREIMGTPEYLAPEILNYDPITT---ATDMWNIGIIAY 224 (327)
T ss_dssp GGGCEEC------------------CCCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred CccccccCCcc---------ccccccCCcCccCCeeecCCCCCc---hhhHHHHHHHHH
Confidence 99998763221 122367999999999998877655 499999999998
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-32 Score=284.19 Aligned_cols=181 Identities=21% Similarity=0.281 Sum_probs=144.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEE-ecCCcccchh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC-SSIDFEGFDF 547 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~~~~~lv~ 547 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+|+++++.++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999997 8999865332 223588999999999988877766665 5566789999
Q ss_pred hhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee---CCCCcEEEccccccccccC
Q 041467 548 KAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 548 e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DfGla~~~~~ 618 (746)
||+ +|++. ...+++.++..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||+|+....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 88875 45689999999999999999999999 99999999999999 7889999999999987654
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ..........||+.|+|||++.+..++.+ +||||+||++|
T Consensus 161 ~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ 206 (296)
T 4hgt_A 161 ARTHQH-IPYRENKNLTGTARYASINTHLGIEQSRR---DDLESLGYVLM 206 (296)
T ss_dssp TTTCCB-CCCCCSCCCCSCGGGCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred cccCcc-CCCCcccccCCCccccchHHhcCCCCCch---hHHHHHHHHHH
Confidence 332111 01112334689999999999998877554 99999999998
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-32 Score=283.93 Aligned_cols=231 Identities=21% Similarity=0.247 Sum_probs=163.9
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 45788999999999999996 689988654 2344677999999999999999999999998755 8
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 8999999999886 35689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-ccc-----------cchhhc--cc
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQN-----------KSILKS--AG 683 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~~-----------~~i~~~--~~ 683 (746)
..... ........||..|+|||++.+..++.+ +||||+||++|.... ... ..+... ..
T Consensus 173 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~ 244 (291)
T 1u46_A 173 QNDDH-----YVMQEHRKVPFAWCAPESLKTRTFSHA---SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 244 (291)
T ss_dssp C-CCE-----EEC-----CCGGGCCHHHHHHCEEEHH---HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCC
T ss_pred ccccc-----hhhhccCCCCceeeCchhhcCCCCCch---hhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCC
Confidence 32211 111223567889999999988777654 999999999983222 110 011111 01
Q ss_pred cCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 684 IKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
.......+.+..++..|+...|. ||+..++...+....
T Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 245 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 11123334444555555555555 788887766555443
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=286.53 Aligned_cols=184 Identities=22% Similarity=0.269 Sum_probs=146.9
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC-----Cc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSI-----DF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~-----~~ 542 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++||||+++++++... ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 457899999999999999997 8999986432 33456788999999999999999999998764 56
Q ss_pred ccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 543 EGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 543 ~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
.++||||+. |++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+....
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 789999997 4554 45789999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCC--cccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 619 YEPGTT--AETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~--~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ..........+||+.|+|||++.+ ..++ .++||||+||++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~~Di~slG~il~ 214 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYS---RAMDVWSCGCILA 214 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCC---HHHHHHHHHHHHH
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCcc---chhhHHHHHHHHH
Confidence 322110 011112334689999999999865 4444 3599999999998
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=269.86 Aligned_cols=274 Identities=19% Similarity=0.220 Sum_probs=151.6
Q ss_pred CCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 4 n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
|.+..+|... .+.|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+. .+|
T Consensus 43 ~~l~~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~ 118 (332)
T 2ft3_A 43 LGLKAVPKEI---SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIP 118 (332)
T ss_dssp SCCSSCCSCC---CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCC
T ss_pred CCccccCCCC---CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccC
Confidence 4445454433 368999999999999888889999999999999999999888999999999999999999986 455
Q ss_pred hhhcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEE
Q 041467 84 TEICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLN 159 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 159 (746)
..+. ++|++|+++++... ..|.++++|+.|++++|.+.. .+..+..|..+ +|++|+
T Consensus 119 ~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~-----------------~~~~~~~~~~l-~L~~L~ 178 (332)
T 2ft3_A 119 PNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN-----------------SGFEPGAFDGL-KLNYLR 178 (332)
T ss_dssp SSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG-----------------GGSCTTSSCSC-CCSCCB
T ss_pred cccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc-----------------CCCCcccccCC-ccCEEE
Confidence 5443 56666666554322 224445555555555554421 12334444444 455555
Q ss_pred ccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeec
Q 041467 160 LGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTM 239 (746)
Q Consensus 160 Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L 239 (746)
+++|.+++.+ ..+. ++|++|++++|.+++..|..+..++ +|+.|++++|++++..|.+|..+++|++|+|
T Consensus 179 l~~n~l~~l~-------~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 248 (332)
T 2ft3_A 179 ISEAKLTGIP-------KDLP--ETLNELHLDHNKIQAIELEDLLRYS-KLYRLGLGHNQIRMIENGSLSFLPTLRELHL 248 (332)
T ss_dssp CCSSBCSSCC-------SSSC--SSCSCCBCCSSCCCCCCTTSSTTCT-TCSCCBCCSSCCCCCCTTGGGGCTTCCEEEC
T ss_pred CcCCCCCccC-------cccc--CCCCEEECCCCcCCccCHHHhcCCC-CCCEEECCCCcCCcCChhHhhCCCCCCEEEC
Confidence 5555444321 1111 3444555555555444444444444 3555555555554444444445555555555
Q ss_pred ccccceecCCcCCCCCCCCceeeccccccccccccccccc---------ChHHhhhccCC--CCCCccccCCCCCCeeee
Q 041467 240 ESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNL---------TLQTYLFNNLQ--GNIPSSLANCKSLLGLSV 308 (746)
Q Consensus 240 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l---------~~l~~l~n~l~--~~~p~~~~~l~~L~~L~L 308 (746)
++|++. .+|..+..+++|++|++++|++++..+..+... +.+.+.+|.+. +..|..|..+++|+.+++
T Consensus 249 ~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l 327 (332)
T 2ft3_A 249 DNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQF 327 (332)
T ss_dssp CSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC
T ss_pred CCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhc
Confidence 555444 344444445555555555555443332222111 11111111111 234455666666666666
Q ss_pred cCCc
Q 041467 309 SHNK 312 (746)
Q Consensus 309 s~N~ 312 (746)
++|+
T Consensus 328 ~~n~ 331 (332)
T 2ft3_A 328 GNYK 331 (332)
T ss_dssp ----
T ss_pred cccc
Confidence 6654
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-32 Score=281.65 Aligned_cols=172 Identities=24% Similarity=0.316 Sum_probs=141.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC-Ccccchhhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI-DFEGFDFKA 549 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~-~~~~lv~e~ 549 (746)
..++|+..+.||+|+||.||+ ||||++... ...+.+.+|++++++++||||+++++++... +..++||||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred ChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 457899999999999999997 899998643 2456799999999999999999999997654 478999999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
+++|+|. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--- 170 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 170 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc---
Confidence 9999886 12378999999999999999999999 9999999999999999999999999999764321
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+++.|+|||++.+..++.+ +||||+||++|
T Consensus 171 --------~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 205 (278)
T 1byg_A 171 --------QDTGKLPVKWTAPEALREKKFSTK---SDVWSFGILLW 205 (278)
T ss_dssp -------------CCTTTSCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred --------ccCCCccccccCHHHhCCCCCCch---hcHHHHHHHHH
Confidence 112457889999999988776554 99999999998
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-32 Score=288.18 Aligned_cols=182 Identities=22% Similarity=0.266 Sum_probs=150.4
Q ss_pred hhhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhc--CCCCceeeEEEEEecCC----cc
Q 041467 477 KATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRN--IRHRNLIKIITICSSID----FE 543 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~~~~~~~~----~~ 543 (746)
...++|+..+.||+|+||.||+ ||||++... ..+.+.+|+++++. ++||||+++++++.... ..
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~ 115 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 115 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred cccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence 3456899999999999999997 899998633 34567889988887 78999999999998876 78
Q ss_pred cchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 544 GFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLR--------HHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 544 ~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH--------~~~~~~ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
++||||+++|+|. ...+++.++..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||
T Consensus 116 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 192 (342)
T 1b6c_B 116 WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLG 192 (342)
T ss_dssp EEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEEECC
Confidence 9999999999986 457899999999999999999999 66 99999999999999999999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccc---cCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLE---NREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~---~~~~~~DiwSlG~i~~ 668 (746)
+++........ .........||+.|+|||++.+.... .++.++|||||||++|
T Consensus 193 ~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ 248 (342)
T 1b6c_B 193 LAVRHDSATDT----IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 248 (342)
T ss_dssp TCEEEETTTTE----EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred Cceeccccccc----cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHH
Confidence 99876433211 01122346799999999999875322 1124699999999998
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-32 Score=287.69 Aligned_cols=229 Identities=18% Similarity=0.214 Sum_probs=168.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
..++|+..+.||+|+||.||+ ||||++... .......+.+|+.++++++||||+++++++...+.
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 346899999999999999995 899988533 23445678999999999999999999999999999
Q ss_pred ccchhhhccCCccc-----c-------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEE
Q 041467 543 EGFDFKAISNGQLR-----L-------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHV 607 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~-------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki 607 (746)
.++||||+++|+|. . ..+++.++..++.|++.||+|||+. +|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999885 1 3489999999999999999999999 9999999999999984 456999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchh
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSIL 679 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~ 679 (746)
+|||+++........ .......||+.|+|||++.+..++.+ +|||||||++|.... .. ...+.
T Consensus 185 ~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ellt~g~~p~~~~~~~~~~ 255 (327)
T 2yfx_A 185 GDFGMARDIYRASYY------RKGGCAMLPVKWMPPEAFMEGIFTSK---TDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255 (327)
T ss_dssp CCCHHHHHHHC------------CCGGGSCGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred Ccccccccccccccc------ccCCCcCCCcceeCHhHhcCCCCCch---hhHHHHHHHHHHHHcCCCCCCCCcCHHHHH
Confidence 999999865432211 11223568999999999988776554 999999999983221 10 00111
Q ss_pred ----h-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 680 ----K-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 680 ----~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
. ..........+.+..++..|+...|. ||+..++...++
T Consensus 256 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 256 EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 0 01112223344455555555555666 788876665444
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-32 Score=282.76 Aligned_cols=184 Identities=21% Similarity=0.277 Sum_probs=143.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec---------
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS--------- 539 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--------- 539 (746)
..++|+..+.||+|+||.||+ ||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 356789999999999999997 899988543 3345678999999999999999999998865
Q ss_pred ----CCcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcc
Q 041467 540 ----IDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGD 609 (746)
Q Consensus 540 ----~~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 609 (746)
.+..++||||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 34678999999999986 33578899999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCCCC------ccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 610 LGLAKFLYGYEPGTT------AETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 610 fGla~~~~~~~~~~~------~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
||+++.......... ...........||+.|+|||++.+. .+ +.++||||+||++|
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~~Di~slG~il~ 222 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY---NEKIDMYSLGIIFF 222 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCC---CTHHHHHHHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCC---cchhhHHHHHHHHH
Confidence 999987643211000 0001223346799999999999865 34 34699999999998
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-32 Score=297.30 Aligned_cols=177 Identities=22% Similarity=0.265 Sum_probs=131.4
Q ss_pred hcCCCC-CCeEeecCCeeEEE-----------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec--CCccc
Q 041467 479 TNNFSP-ANKIREGGFNIVYN-----------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS--IDFEG 544 (746)
Q Consensus 479 ~~~~~~-~~~ig~g~~g~v~~-----------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~~~ 544 (746)
.+.|+. .+.||+|+||.||+ ||||++... ...+.+.+|++++++++|||||++++++.. ....+
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 344655 56899999999997 899988633 234568899999999999999999999954 56789
Q ss_pred chhhhccCCccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee----CCCCcEEE
Q 041467 545 FDFKAISNGQLR-------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL----DQDVVTHV 607 (746)
Q Consensus 545 lv~e~~~~g~l~-------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl----~~~~~~ki 607 (746)
+||||+.++.+. ...+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+||
T Consensus 97 lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 97 LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999999754332 12489999999999999999999999 99999999999999 67899999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccccc-cccCCCccceeeccceee
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN-LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~~~~DiwSlG~i~~ 668 (746)
+|||+|+....... ........+||++|+|||++.+.. ++ .++||||+||++|
T Consensus 174 ~Dfg~a~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~~DiwSlG~il~ 227 (405)
T 3rgf_A 174 ADMGFARLFNSPLK-----PLADLDPVVVTFWYRAPELLLGARHYT---KAIDIWAIGCIFA 227 (405)
T ss_dssp CCTTCCC---------------------CCCTTCCHHHHTTCCSCC---HHHHHHHHHHHHH
T ss_pred EECCCceecCCCCc-----ccccCCCceecCcccCchhhcCCCccc---chhhhHHHHHHHH
Confidence 99999987643211 112233478999999999998754 44 4599999999998
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-32 Score=291.81 Aligned_cols=242 Identities=20% Similarity=0.255 Sum_probs=170.9
Q ss_pred HHHhhhhcCCCCCCeEeecCCeeEEE------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 473 AELSKATNNFSPANKIREGGFNIVYN------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 473 ~~~~~~~~~~~~~~~ig~g~~g~v~~------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
.++....++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 105 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence 34444567899999999999999997 8999886442 223456889999999999999999999999999999
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+||||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++ ++.+||+|||+++....
T Consensus 106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 999999999886 23589999999999999999999999 999999999999998 68999999999876532
Q ss_pred CCCCCCccccccccccccccccccccccccccc------ccCCCccceeeccceeecccccc-------ccc----hhh-
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNL------ENREKRHTVMSFPQRFALNEKKQ-------NKS----ILK- 680 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~------~~~~~~~DiwSlG~i~~~~~~~~-------~~~----i~~- 680 (746)
.... ..........||+.|+|||++.+... ..++.++|||||||++|...... ... +..
T Consensus 182 ~~~~---~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 258 (319)
T 2y4i_B 182 LQAG---RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG 258 (319)
T ss_dssp ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTT
T ss_pred cccc---ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccC
Confidence 2211 11122234569999999999975321 12355699999999998221110 000 000
Q ss_pred ccc-----cCCCccHHHHHHhhCCCCCCCCCCCCccchhhhcccCCCCC
Q 041467 681 SAG-----IKGKKTVSFFLSLLSPSCSVFPLTPSSNSFTLLGLRLPSRS 724 (746)
Q Consensus 681 ~~~-----~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~ 724 (746)
..+ ..+......+..|++.++. +||+..++...++.+..+.
T Consensus 259 ~~~~~~~~~~~~~l~~li~~~l~~~p~---~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 259 MKPNLSQIGMGKEISDILLFCWAFEQE---ERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCCCCCSSCCTTHHHHHHHHHCSSTT---TSCCHHHHHHHHTTC----
T ss_pred CCCCCCcCCCCHHHHHHHHHHhcCChh---hCcCHHHHHHHHHHHHHhh
Confidence 001 1123444555555554443 2788888888777776554
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=285.12 Aligned_cols=188 Identities=21% Similarity=0.234 Sum_probs=134.2
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEec-------
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSS------- 539 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~------- 539 (746)
....+|+..+.||+|+||.||+ ||||++........+.+.+|+.+++++. |||||++++++..
T Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 3445789999999999999997 8999886555555677999999999996 9999999999843
Q ss_pred -CCcccchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCeeeCCCCcEEEc
Q 041467 540 -IDFEGFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS--IVHGDLKPSNILLDQDVVTHVG 608 (746)
Q Consensus 540 -~~~~~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivHrDlkp~NILl~~~~~~ki~ 608 (746)
....+++|||+. |++. ...+++.++..++.||+.||+|||+. + |+||||||+||+++.++.+||+
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEe
Confidence 334789999996 5553 34689999999999999999999998 7 9999999999999999999999
Q ss_pred cccccccccCCCCCCCc----ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 609 DLGLAKFLYGYEPGTTA----ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 609 DfGla~~~~~~~~~~~~----~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|||+++........... ..........||+.|+|||++.......++.++|||||||++|
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~ 244 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHH
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHH
Confidence 99999876433221000 0001122467999999999994322222345699999999998
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=280.74 Aligned_cols=175 Identities=19% Similarity=0.235 Sum_probs=147.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..++|+..+.||+|+||.||+ ||||++... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 456789999999999999997 899988643 235678999999999999999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-- 179 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-- 179 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--
Confidence 99998886 45789999999999999999999999 99999999999999999999999999998763321
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 180 ------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 216 (314)
T 3com_A 180 ------AKRNTVIGTPFWMAPEVIQEIGYNCV---ADIWSLGITAI 216 (314)
T ss_dssp ------SCBCCCCSCGGGCCHHHHSSSCBCTT---HHHHHHHHHHH
T ss_pred ------cccCccCCCCCccChhhcCCCCCCcc---ccHHHHHHHHH
Confidence 11234678999999999988776554 99999999998
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-32 Score=281.92 Aligned_cols=183 Identities=23% Similarity=0.302 Sum_probs=135.7
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3457899999999999999996 8999986543 33456788999999999999999999999999999999
Q ss_pred hhhccCCccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 547 FKAISNGQLR-------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 547 ~e~~~~g~l~-------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
|||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 9999999875 13489999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
+........ ..........||+.|+|||++.+ ..++ .++||||+||++|
T Consensus 169 ~~~~~~~~~---~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~~Di~slG~il~ 218 (303)
T 2vwi_A 169 AFLATGGDI---TRNKVRKTFVGTPCWMAPEVMEQVRGYD---FKADIWSFGITAI 218 (303)
T ss_dssp HHCC------------------CCCTTCCHHHHHHHHCCC---THHHHHHHHHHHH
T ss_pred heeccCCCc---cchhhhcccCCCccccCHHHhccccCCC---chhhHHHHHHHHH
Confidence 876432211 01112234679999999999876 3343 4599999999998
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.7e-32 Score=281.76 Aligned_cols=181 Identities=21% Similarity=0.281 Sum_probs=147.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEE-ecCCcccchh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC-SSIDFEGFDF 547 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~~~~~lv~ 547 (746)
..++|+..+.||+|+||.||+ ||||++.... ..+.+.+|+++++.++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 356899999999999999997 8999875432 234689999999999998877666655 4566789999
Q ss_pred hhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee---CCCCcEEEccccccccccC
Q 041467 548 KAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 548 e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DfGla~~~~~ 618 (746)
||+ +|+|. ...+++.++..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 999 88875 45689999999999999999999999 99999999999999 4789999999999987654
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ..........||+.|+|||++.+..++.+ +|||||||++|
T Consensus 161 ~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ 206 (296)
T 3uzp_A 161 ARTHQH-IPYRENKNLTGTARYASINTHLGIEQSRR---DDLESLGYVLM 206 (296)
T ss_dssp TTTCCB-CCCCCSCCCCSCTTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred cccccc-cccccccccccccccCChhhhcCCCCCcc---hhhHHHHHHHH
Confidence 332111 01112344689999999999998877554 99999999998
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=285.72 Aligned_cols=175 Identities=19% Similarity=0.326 Sum_probs=151.7
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhh-----------------hHHHHHHHHHhhcCCCCceeeEE
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEA-----------------SRSFAAEFNALRNIRHRNLIKII 534 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~HpnIv~l~ 534 (746)
.++|+..+.||+|+||.||+ ||||++....... .+.+.+|++++++++||||++++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 46899999999999999997 8999987553221 17899999999999999999999
Q ss_pred EEEecCCcccchhhhccCCccc-------------ccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCCeeeC
Q 041467 535 TICSSIDFEGFDFKAISNGQLR-------------LCNLSLTQRVNIAIDVAFAIEYLRH-HCQPSIVHGDLKPSNILLD 600 (746)
Q Consensus 535 ~~~~~~~~~~lv~e~~~~g~l~-------------~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivHrDlkp~NILl~ 600 (746)
+++.+.+..++||||+++|+|. ...+++..+..++.|++.|++|||+ . +|+||||||+||+++
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMD 186 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEEC
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEc
Confidence 9999999999999999998874 2457899999999999999999999 8 999999999999999
Q ss_pred CCCcEEEccccccccccCCCCCCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 601 QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 601 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
.++.+||+|||+++..... ......||+.|+|||++.+. .++. .++||||+||++|
T Consensus 187 ~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~--~~~Di~slG~il~ 243 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK----------KIKGSRGTYEFMPPEFFSNESSYNG--AKVDIWSLGICLY 243 (348)
T ss_dssp TTSCEEECCCTTCEECBTT----------EECSSCSCGGGCCGGGGSSCCCEEH--HHHHHHHHHHHHH
T ss_pred CCCcEEEeccccccccccc----------cccCCCCCcCccCchhhcCCCCCCc--chhhHHHHHHHHH
Confidence 9999999999999875321 22346789999999999877 4543 1599999999998
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=293.18 Aligned_cols=173 Identities=21% Similarity=0.291 Sum_probs=145.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC--------CCceeeEEEEEe---
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR--------HRNLIKIITICS--- 538 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~--------HpnIv~l~~~~~--- 538 (746)
.++|+..+.||+|+||.||+ ||||++... ....+.+.+|+++++.++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46799999999999999997 899998643 334567889999999996 888999999998
Q ss_pred -cCCcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC--------
Q 041467 539 -SIDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV-------- 603 (746)
Q Consensus 539 -~~~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~-------- 603 (746)
.....++||||+.++.+. ...+++.++..++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 115 VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhh
Confidence 455789999999554443 246899999999999999999999964 899999999999999775
Q ss_pred -----------------------------------------cEEEccccccccccCCCCCCCcccccccccccccccccc
Q 041467 604 -----------------------------------------VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642 (746)
Q Consensus 604 -----------------------------------------~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 642 (746)
.+||+|||+|+..... ....+||+.|+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----------~~~~~gt~~y~a 261 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----------FTEDIQTRQYRS 261 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----------SCSCCSCGGGCC
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----------CccCCCCCcccC
Confidence 8999999999875321 223578999999
Q ss_pred cccccccccccCCCccceeeccceee
Q 041467 643 PVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 643 PE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
||++.+..++. ++|||||||++|
T Consensus 262 PE~~~~~~~~~---~~DiwslG~il~ 284 (397)
T 1wak_A 262 LEVLIGSGYNT---PADIWSTACMAF 284 (397)
T ss_dssp HHHHHTSCCCT---HHHHHHHHHHHH
T ss_pred ChhhcCCCCCc---HHHHHHHHHHHH
Confidence 99999887655 599999999998
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=285.03 Aligned_cols=172 Identities=19% Similarity=0.279 Sum_probs=143.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc-----
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDF----- 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~----- 542 (746)
.++|...+.||+|+||.||+ ||||++.... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 46789999999999999997 8999986432 3345678999999999999999999999987654
Q ss_pred -ccchhhhccCCccc---ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 543 -EGFDFKAISNGQLR---LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 543 -~~lv~e~~~~g~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
.++||||+. |++. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred eEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 489999997 5654 44689999999999999999999999 999999999999999999999999999976421
Q ss_pred CCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+ ..++ .++||||+||++|
T Consensus 179 -----------~~~~~~~t~~y~aPE~~~~~~~~~---~~~Di~slG~il~ 215 (353)
T 3coi_A 179 -----------EMTGYVVTRWYRAPEVILSWMHYN---QTVDIWSVGCIMA 215 (353)
T ss_dssp ----------------CCSBCCSCHHHHSCCSCCC---TTHHHHHHHHHHH
T ss_pred -----------CccccccCcCcCCHHHHhCcCCCC---chhhHHHHHHHHH
Confidence 1223678999999999987 3443 4599999999998
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=276.33 Aligned_cols=179 Identities=27% Similarity=0.323 Sum_probs=151.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---------hhhhHHHHHHHHHhhcCC-CCceeeEEEEEe
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---------KEASRSFAAEFNALRNIR-HRNLIKIITICS 538 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~ 538 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 457899999999999999997 8999885432 233457889999999996 999999999999
Q ss_pred cCCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 539 SIDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 539 ~~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
..+..++||||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred cCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccch
Confidence 999999999999999986 45789999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccc---cccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN---LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~~~~~DiwSlG~i~~ 668 (746)
+...... ......||+.|+|||++.+.. ...++.++||||+||++|
T Consensus 172 ~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~ 220 (298)
T 1phk_A 172 CQLDPGE---------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220 (298)
T ss_dssp EECCTTC---------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHH
T ss_pred hhcCCCc---------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHH
Confidence 8763221 123367899999999986321 122355699999999998
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=282.89 Aligned_cols=178 Identities=20% Similarity=0.306 Sum_probs=141.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec----------
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS---------- 539 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~---------- 539 (746)
.++|+..+.||+|+||.||+ ||||++........+.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 46789999999999999997 89998876655667789999999999999999999998743
Q ss_pred ----CCcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-CCCcEEEccc
Q 041467 540 ----IDFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGDL 610 (746)
Q Consensus 540 ----~~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ki~Df 610 (746)
....++||||+. |++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++ +++.+||+||
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccC
Confidence 356789999997 5664 45689999999999999999999999 999999999999997 5779999999
Q ss_pred cccccccCCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 611 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+++........ ........||..|+|||++.+ ..++ .++|||||||++|
T Consensus 166 g~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~---~~~Di~slG~il~ 216 (320)
T 2i6l_A 166 GLARIMDPHYSH-----KGHLSEGLVTKWYRSPRLLLSPNNYT---KAIDMWAAGCIFA 216 (320)
T ss_dssp TTCBCC-------------CCCGGGSCCTTCCHHHHHCTTCCC---HHHHHHHHHHHHH
T ss_pred ccccccCCCccc-----ccccccccccccccCcHHhcCcccCC---chhhhHhHHHHHH
Confidence 999876432211 112233568999999999876 4444 3599999999998
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=288.89 Aligned_cols=181 Identities=19% Similarity=0.194 Sum_probs=138.4
Q ss_pred HHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc-
Q 041467 473 AELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF- 542 (746)
Q Consensus 473 ~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~- 542 (746)
.+.....++|+..+.||+|+||.||+ ||||++... ......+.+|++.++.++|||||+++++|...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 44556778999999999999999996 899987533 2234457788889999999999999999976443
Q ss_pred ------ccchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeEEcCCCCCCeeeCC-CCcE
Q 041467 543 ------EGFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLR--HHCQPSIVHGDLKPSNILLDQ-DVVT 605 (746)
Q Consensus 543 ------~~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH--~~~~~~ivHrDlkp~NILl~~-~~~~ 605 (746)
.++||||+.++... ...+++..+..++.|++.|++||| +. +|+||||||+||+++. ++.+
T Consensus 95 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp CTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEE
T ss_pred cccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcE
Confidence 78999999876432 456889999999999999999999 77 9999999999999996 8999
Q ss_pred EEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 606 ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
||+|||+|+...... ......||+.|+|||++.+... ++.++||||+||++|
T Consensus 172 kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~--~~~~~Di~slG~il~ 223 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSE---------PNVAYICSRYYRAPELIFGNQH--YTTAVDIWSVGCIFA 223 (360)
T ss_dssp EECCCTTCBCCCTTS---------CCCSTTSCGGGCCHHHHTTCSS--CCTHHHHHHHHHHHH
T ss_pred EEeeCCCceecCCCC---------CcccccCCcceeCHHHHcCCCC--CCcHHHHHHHHHHHH
Confidence 999999998764322 1234678999999999976542 234699999999998
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=288.26 Aligned_cols=172 Identities=13% Similarity=0.103 Sum_probs=127.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC--CCCceeeEE-------EEE
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI--RHRNLIKII-------TIC 537 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l--~HpnIv~l~-------~~~ 537 (746)
...|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.+ +|||||+++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 44588999999999999997 8999987532 23455678885544444 699988865 444
Q ss_pred ecCC-----------------cccchhhhccCCccc------ccCCCHHHH------HHHHHHHHHHHHHHHhcCCCCeE
Q 041467 538 SSID-----------------FEGFDFKAISNGQLR------LCNLSLTQR------VNIAIDVAFAIEYLRHHCQPSIV 588 (746)
Q Consensus 538 ~~~~-----------------~~~lv~e~~~~g~l~------~~~l~~~~~------~~i~~~i~~~l~yLH~~~~~~iv 588 (746)
...+ ..++||||++ |+|. ...+++..+ ..++.||+.||+|||++ +|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCc
Confidence 3322 2699999998 8875 234566666 78889999999999999 999
Q ss_pred EcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccc--cccccCCCccceeeccce
Q 041467 589 HGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA--RNLENREKRHTVMSFPQR 666 (746)
Q Consensus 589 HrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~~~~DiwSlG~i 666 (746)
||||||+|||++.++.+||+|||+|+.... ......||+.|+|||++.+ ..++. ++|||||||+
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----------~~~~~~~t~~y~aPE~~~~~~~~~~~---~~DiwSlG~i 282 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----------RGPASSVPVTYAPREFLNASTATFTH---ALNAWQLGLS 282 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC-----------EEEGGGSCGGGCCHHHHTCSEEECCH---HHHHHHHHHH
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC-----------CccCccCCcCCcChhhccCCCCCcCc---cccHHHHHHH
Confidence 999999999999999999999999986521 1113567799999999986 55544 5999999999
Q ss_pred ee
Q 041467 667 FA 668 (746)
Q Consensus 667 ~~ 668 (746)
+|
T Consensus 283 l~ 284 (371)
T 3q60_A 283 IY 284 (371)
T ss_dssp HH
T ss_pred HH
Confidence 98
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=308.93 Aligned_cols=231 Identities=19% Similarity=0.211 Sum_probs=169.2
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSI 540 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~ 540 (746)
+.....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+.++++++|||||++++++. .
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 3334456788899999999999996 7888876432 334567999999999999999999999985 4
Q ss_pred CcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccc
Q 041467 541 DFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~ 614 (746)
+..++||||+++|+|. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCe
Confidence 6689999999999986 23689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c----------cchhhc-
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N----------KSILKS- 681 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~----------~~i~~~- 681 (746)
....... .......||+.|||||++.+..++.+ +|||||||++|.... .. . ..+...
T Consensus 540 ~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~---~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~ 609 (656)
T 2j0j_A 540 YMEDSTY-------YKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 609 (656)
T ss_dssp SCCC-----------------CCGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTC
T ss_pred ecCCCcc-------eeccCCCCCcceeCHHHhcCCCCCch---hhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC
Confidence 7633211 11223457889999999988776554 999999999983211 10 0 011110
Q ss_pred cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 682 AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.......+.+.+..++..|+...|. ||+..++...+.
T Consensus 610 ~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 610 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1111223344555555556666666 777776654433
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-31 Score=275.93 Aligned_cols=176 Identities=18% Similarity=0.220 Sum_probs=135.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|...++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 356899999999999999997 8999886542 22233455666678999999999999999999999999
Q ss_pred hhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 547 FKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 547 ~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
|||+++ ++. ...+++..+..++.|++.|++|||+++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 999975 442 357899999999999999999999853 89999999999999999999999999998753
Q ss_pred CCCCCCCccccccccccccccccccccccc----ccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIA----ARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ......||+.|+|||++. +..+ +.++||||+||++|
T Consensus 162 ~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~---~~~~Di~slG~il~ 204 (290)
T 3fme_A 162 DDV---------AKDIDAGCKPYMAPERINPELNQKGY---SVKSDIWSLGITMI 204 (290)
T ss_dssp -----------------CCCCCCSCHHHHSCCTTC--C---CHHHHHHHHHHHHH
T ss_pred ccc---------cccccCCCccccChhhcChhhcCcCC---CcHHHHHHHHHHHH
Confidence 321 122346899999999973 3334 44599999999998
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.5e-32 Score=283.83 Aligned_cols=224 Identities=19% Similarity=0.192 Sum_probs=158.9
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh------hhhHHHHHHHHHhhcC----CCCceeeEEEE
Q 041467 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQK------EASRSFAAEFNALRNI----RHRNLIKIITI 536 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~------~~~~~~~~E~~~l~~l----~HpnIv~l~~~ 536 (746)
....++|+..+.||+|+||.||+ ||||++..... .....+.+|+++++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 44567899999999999999997 89999864422 1223466899999998 89999999999
Q ss_pred EecCCcccchhhh-ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-CCCcEEEcc
Q 041467 537 CSSIDFEGFDFKA-ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGD 609 (746)
Q Consensus 537 ~~~~~~~~lv~e~-~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ki~D 609 (746)
+...+..++|||+ +.++++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~d 183 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLID 183 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEE
Confidence 9999999999999 6788875 45689999999999999999999999 999999999999999 889999999
Q ss_pred ccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-----ccccchhhcccc
Q 041467 610 LGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-----KQNKSILKSAGI 684 (746)
Q Consensus 610 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-----~~~~~i~~~~~~ 684 (746)
||+++..... ......||..|+|||++.+..+.. .++||||+||++|.... .....+......
T Consensus 184 fg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~--~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 251 (312)
T 2iwi_A 184 FGSGALLHDE----------PYTDFDGTRVYSPPEWISRHQYHA--LPATVWSLGILLYDMVCGDIPFERDQEILEAELH 251 (312)
T ss_dssp CSSCEECCSS----------CBCCCCSCTTTSCHHHHHHSCBCH--HHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTCCC
T ss_pred cchhhhcccC----------cccccCCcccccCceeeecCCCCC--ccchHHHHHHHHHHHHHCCCCCCChHHHhhhccC
Confidence 9999876322 122366899999999998766533 25999999999982211 111122222111
Q ss_pred CCCccHHHHHHhhCCCCCCCCC-CCCccchh
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
......+.+..++..|+...|. ||+..++.
T Consensus 252 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l 282 (312)
T 2iwi_A 252 FPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282 (312)
T ss_dssp CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CcccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 1123333444444444445555 77776554
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=283.02 Aligned_cols=188 Identities=20% Similarity=0.256 Sum_probs=147.6
Q ss_pred cccHHHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEe
Q 041467 469 MISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICS 538 (746)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~ 538 (746)
.++..++....++|+..+.||+|+||.||+ ||||++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 344555666788999999999999999997 8999886432 3346789999999999 7999999999998
Q ss_pred c------CCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcE
Q 041467 539 S------IDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605 (746)
Q Consensus 539 ~------~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 605 (746)
. .+..++||||+++|+|. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCE
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCE
Confidence 7 45789999999999885 24689999999999999999999999 99999999999999999999
Q ss_pred EEccccccccccCCCCCCCcccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 606 ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
||+|||++....... .......||+.|+|||++.... ...++.++|||||||++|
T Consensus 169 kl~Dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~ 225 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAI 225 (326)
T ss_dssp EECCCTTTC---------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHH
T ss_pred EEeeCcCceecCcCc--------cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHH
Confidence 999999998653211 1122357899999999997321 112345699999999998
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=8.2e-32 Score=284.96 Aligned_cols=224 Identities=17% Similarity=0.183 Sum_probs=167.1
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhh------hhHHHHHHHHHhhcCC--CCceeeEEEEEe
Q 041467 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE------ASRSFAAEFNALRNIR--HRNLIKIITICS 538 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~------~~~~~~~E~~~l~~l~--HpnIv~l~~~~~ 538 (746)
....++|+..+.||+|+||.||+ ||||++...... ..+.+.+|+.++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 34567899999999999999997 899998654321 2345778999999996 599999999999
Q ss_pred cCCcccchhhhccC-Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-CCCcEEEcccc
Q 041467 539 SIDFEGFDFKAISN-GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGDLG 611 (746)
Q Consensus 539 ~~~~~~lv~e~~~~-g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ki~DfG 611 (746)
..+..++|||++.. +++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+||+|||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 99999999999975 6664 45789999999999999999999999 999999999999999 78999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-----ccccchhhccccCC
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-----KQNKSILKSAGIKG 686 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-----~~~~~i~~~~~~~~ 686 (746)
+++..... ......||+.|+|||++.+..+. +.++|||||||++|.... .....+........
T Consensus 196 ~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~--~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 263 (320)
T 3a99_A 196 SGALLKDT----------VYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 263 (320)
T ss_dssp TCEECCSS----------CBCCCCSCGGGSCHHHHHHSCBC--HHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCS
T ss_pred cccccccc----------cccCCCCCccCCChHHhccCCCC--CccchHHhHHHHHHHHHHCCCCCCChhhhhccccccc
Confidence 99876321 12236799999999999877653 235999999999982211 11112222111122
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchh
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
....+.+..++..|+...|. ||+..++.
T Consensus 264 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll 292 (320)
T 3a99_A 264 QRVSSECQHLIRWCLALRPSDRPTFEEIQ 292 (320)
T ss_dssp SCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 23334444444444555555 77766544
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-31 Score=299.37 Aligned_cols=340 Identities=19% Similarity=0.194 Sum_probs=243.2
Q ss_pred ccccEEecccCcCcccCchh-hhCCccCcEEecccCcCCc----cCCccccCCCCCCeeeCcCCCCCCccchhh-cCCC-
Q 041467 18 TFLRYINLVNNGFNGEIPHQ-IGRLISLERLILSNNSFSC----AIPANLSSGSNLIKLSTDSNNLVRDILTEI-CSLF- 90 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~- 90 (746)
++|++|||++|+++...... +..+++|++|+|++|.++. .++..+..+++|++|+|++|.+....+..+ ..+.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 56888999888887543333 7788889999999988874 356677888889999998888765444433 3355
Q ss_pred ---CCCEEEccCCCCc--------CcccCCCCCCEEeccCCCccc----------ccCCCCCcEeeCccCcccccC----
Q 041467 91 ---KLERLRIDCGGRI--------DSLGHLKSLLLLSLAFNQFLS----------LSNASSLEMIEFSRNQFSGGV---- 145 (746)
Q Consensus 91 ---~L~~L~l~~~~~~--------~~~~~l~~L~~L~Ls~N~l~~----------l~~l~~L~~L~Ls~N~l~~~~---- 145 (746)
+|++|+++++... ..+..+++|+.|+|++|.+.. ....++|++|+|++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 6888888876533 346788889999999888842 123567899999999888643
Q ss_pred CccccCCCCCCEEEccCCCCCCCCCCCcccccccc-----CCCCCCEEEccccccccc----CChhhhhcccccceEEcc
Q 041467 146 SVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLT-----NCSKLERLYFNRNGFEGV----LPHSIANLSSTIKQIAMG 216 (746)
Q Consensus 146 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~~L~~L~l~ 216 (746)
+..+..+++|++|+|++|.++. ..+..+. ..++|++|++++|.+++. ++..+..++ +|+.|+++
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~------~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~-~L~~L~Ls 235 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINE------AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKA-SLRELALG 235 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHH------HHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCT-TCCEEECC
T ss_pred HHHHhhCCCCCEEECcCCCcch------HHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCC-CccEEecc
Confidence 5556677889999999888754 1122222 356888999999988753 466677776 68899999
Q ss_pred cCcccccC-----CccccCCCCCCeeecccccceec----CCcCCCCCCCCceeecccccccccccccc--------ccc
Q 041467 217 SNRISSTI-----PHGIRNLVNLNWLTMESSQLIGT----IPPLIGETPNLQLLNIGGNHLQGSILSSL--------GNL 279 (746)
Q Consensus 217 ~N~i~~~~-----p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l--------~~l 279 (746)
+|++++.. +..+..+++|++|++++|++++. ++..+..+++|++|+|++|.+.+..+..+ .+|
T Consensus 236 ~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L 315 (461)
T 1z7x_W 236 SNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQL 315 (461)
T ss_dssp SSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCC
T ss_pred CCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccc
Confidence 98887532 33344678899999998888754 56667778889999999998875433222 356
Q ss_pred ChHHhhhccCCCC----CCccccCCCCCCeeeecCCcCccccchhhhh-----cccccceEEccCccccc----cCchhh
Q 041467 280 TLQTYLFNNLQGN----IPSSLANCKSLLGLSVSHNKLTSTLPQQILS-----VTTLSLYLELDNNLLNG----SLPPEV 346 (746)
Q Consensus 280 ~~l~~l~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~l~~~L~Ls~N~l~~----~~p~~~ 346 (746)
+.|++.+|.+++. +|..+..+++|++|++++|++++..+..+.. .+.+ +.|++++|.+++ .+|..+
T Consensus 316 ~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L-~~L~L~~n~i~~~~~~~l~~~l 394 (461)
T 1z7x_W 316 ESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVL-RVLWLADCDVSDSSCSSLAATL 394 (461)
T ss_dssp CEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCC-CEEECTTSCCCHHHHHHHHHHH
T ss_pred eeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCce-EEEECCCCCCChhhHHHHHHHH
Confidence 6666667777654 4666777888888888888887655555553 4566 578888888875 566666
Q ss_pred hcccCCceeecCCCCCCCCCCCEEEccCCcCccc
Q 041467 347 GNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSE 380 (746)
Q Consensus 347 ~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~ 380 (746)
.. ++.|+.||+++|++++.
T Consensus 395 ~~---------------~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 395 LA---------------NHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HH---------------CCCCCEEECCSSSCCHH
T ss_pred Hh---------------CCCccEEECCCCCCCHH
Confidence 54 34567788888888654
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-31 Score=294.85 Aligned_cols=179 Identities=23% Similarity=0.274 Sum_probs=137.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
...+|...+.||+|+||.||. ||||++.... ...+.+|+++++++ +|||||++++++.+....++|||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 345688899999999999653 9999885432 22367899999999 79999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-----CCcEEEcccccccccc
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-----DVVTHVGDLGLAKFLY 617 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-----~~~~ki~DfGla~~~~ 617 (746)
|+. |++. .....+.++..++.||+.||+|||+. +|+||||||+||+++. ..++||+|||+|+...
T Consensus 99 ~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 996 4654 22355667789999999999999999 9999999999999942 3468899999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .......+||++|+|||++.+.....++.++||||+||++|
T Consensus 175 ~~~~~-----~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ 220 (432)
T 3p23_A 175 VGRHS-----FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFY 220 (432)
T ss_dssp ----------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHH
T ss_pred CCCcc-----eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHH
Confidence 32211 12233477999999999998644344455799999999998
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-31 Score=280.45 Aligned_cols=177 Identities=22% Similarity=0.370 Sum_probs=146.4
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE----------EEeehhhhhh--hhhhHHHHHHHHHhhcC---CCCceeeEEEEEe--
Q 041467 476 SKATNNFSPANKIREGGFNIVYN----------VAMKVANLKQ--KEASRSFAAEFNALRNI---RHRNLIKIITICS-- 538 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~----------vavK~~~~~~--~~~~~~~~~E~~~l~~l---~HpnIv~l~~~~~-- 538 (746)
....++|+..+.||+|+||.||+ ||||++.... ......+.+|+++++.+ +||||+++++++.
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp CCGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred cCchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 34567899999999999999996 8999886432 12233567788877766 8999999999987
Q ss_pred ---cCCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEc
Q 041467 539 ---SIDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608 (746)
Q Consensus 539 ---~~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 608 (746)
.....++||||+. |++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 87 RTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp ECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred ccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 4557899999998 5664 23489999999999999999999999 99999999999999999999999
Q ss_pred cccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 609 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|||+++.... ........||+.|+|||++.+..++. ++||||+||++|
T Consensus 163 Dfg~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 210 (326)
T 1blx_A 163 DFGLARIYSF---------QMALTSVVVTLWYRAPEVLLQSSYAT---PVDLWSVGCIFA 210 (326)
T ss_dssp SCCSCCCCCG---------GGGGCCCCCCCTTCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred cCcccccccC---------CCCccccccccceeCHHHHhcCCCCc---chhHHHHHHHHH
Confidence 9999976521 11223467899999999998877654 599999999998
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-31 Score=293.19 Aligned_cols=180 Identities=22% Similarity=0.272 Sum_probs=148.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCC-CceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRH-RNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~H-pnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||||++..... ...+.+|+++++.++| ++|+.+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999997 89998754322 2358899999999987 566666677777788899999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee---CCCCcEEEccccccccccCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DfGla~~~~~~ 619 (746)
|+ +|+|. ...+++.++..++.||+.||+|||+. +||||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 88875 45799999999999999999999999 99999999999999 58899999999999876543
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ..........||+.|+|||++.+..++.+ +|||||||++|
T Consensus 160 ~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~---sDvwSlGvil~ 204 (483)
T 3sv0_A 160 STHQH-IPYRENKNLTGTARYASVNTHLGIEQSRR---DDLESLGYVLM 204 (483)
T ss_dssp TTCCB-CCCCCCCCCCSCTTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred ccccc-cccccccccCCCccccCHHHhcCCCCChH---HHHHHHHHHHH
Confidence 32111 01112235789999999999998877655 99999999998
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=9e-32 Score=288.66 Aligned_cols=177 Identities=14% Similarity=0.161 Sum_probs=146.5
Q ss_pred hcCCCCCCeEeecCCeeEEE-----------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceee---------
Q 041467 479 TNNFSPANKIREGGFNIVYN-----------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIK--------- 532 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-----------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~--------- 532 (746)
.++|+..+.||+|+||.||+ ||||++... +.+.+|++++++++|||||+
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 36899999999999999996 577776432 45889999999999999998
Q ss_pred ------EEEEEec-CCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCee
Q 041467 533 ------IITICSS-IDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598 (746)
Q Consensus 533 ------l~~~~~~-~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NIL 598 (746)
+++++.. ....++||||+ +|+|. ...+++.++..++.||+.||+|||+. +|+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 6677766 66889999999 88886 25799999999999999999999999 9999999999999
Q ss_pred eCCCC--cEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 599 LDQDV--VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 599 l~~~~--~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++.++ .+||+|||+|+.+........ ..........||+.|+|||++.+..++.+ +|||||||++|
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ 259 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVA-YVEGSRSPHEGDLEFISMDLHKGCGPSRR---SDLQSLGYCML 259 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCC-CCTTSSCTTCSCTTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred EcCCCCceEEEecCcceeeccCCCcccc-ccccccccccCCccccCHHHHccCCCCch---hhHHHHHHHHH
Confidence 99988 999999999987643322111 01112234689999999999988776554 99999999998
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-30 Score=271.57 Aligned_cols=176 Identities=24% Similarity=0.327 Sum_probs=150.0
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 3456899999999999999997 8999986543 2345679999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEcccccccccc
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGDLGLAKFLY 617 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DfGla~~~~ 617 (746)
||||++++++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999885 45789999999999999999999999 9999999999999975 4479999999998753
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ......||+.|+|||++.+. + +.++||||+||++|
T Consensus 176 ~~~---------~~~~~~~~~~y~aPE~~~~~-~---~~~~Di~slG~~l~ 213 (287)
T 2wei_A 176 QNT---------KMKDRIGTAYYIAPEVLRGT-Y---DEKCDVWSAGVILY 213 (287)
T ss_dssp CCS---------SCSCHHHHHTTCCHHHHTTC-C---CTHHHHHHHHHHHH
T ss_pred CCC---------ccccccCcccccChHHhcCC-C---CCchhhHhHHHHHH
Confidence 221 12235689999999998764 4 44699999999998
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-31 Score=280.04 Aligned_cols=171 Identities=20% Similarity=0.273 Sum_probs=146.2
Q ss_pred hcCCCCCCeEeecCCeeEEE----------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCc------eeeEEEEEecCCc
Q 041467 479 TNNFSPANKIREGGFNIVYN----------VAMKVANLKQKEASRSFAAEFNALRNIRHRN------LIKIITICSSIDF 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~----------vavK~~~~~~~~~~~~~~~E~~~l~~l~Hpn------Iv~l~~~~~~~~~ 542 (746)
.++|+..+.||+|+||.||+ ||||++... ....+.+.+|+++++.++|++ |+++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 45899999999999999996 899988643 234567889999999998765 9999999999999
Q ss_pred ccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC--------------
Q 041467 543 EGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-------------- 601 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-------------- 601 (746)
.++||||+ ++++. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 66664 23588999999999999999999999 9999999999999987
Q ss_pred -----CCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 602 -----DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 602 -----~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++.+||+|||+++..... .....||+.|+|||++.+..++. ++||||+||++|
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~il~ 225 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH-----------HSTLVSTRHYRAPEVILALGWSQ---PCDVWSIGCILI 225 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC-----------CCSSCSCGGGCCHHHHTTSCCCT---HHHHHHHHHHHH
T ss_pred cccccCCCceEeeCcccccCccc-----------cccccCCccccChHHhhCCCCCc---chhhHHHHHHHH
Confidence 678999999999864221 12367899999999998877655 499999999998
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-31 Score=278.33 Aligned_cols=180 Identities=18% Similarity=0.211 Sum_probs=127.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHH-HhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFN-ALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~-~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+. +++.++||||+++++++...+..++|
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 347889999999999999997 9999986432 233445666665 78889999999999999999999999
Q ss_pred hhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 547 FKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 547 ~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
|||+.++... ...+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 100 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 100 MELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp ECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred EeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 9999864211 356899999999999999999999953 79999999999999999999999999998753
Q ss_pred CCCCCCCcccccccccccccccccccccccccc-cccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARN-LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~~~~DiwSlG~i~~ 668 (746)
... ......||+.|+|||++.... ...++.++|||||||++|
T Consensus 178 ~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~ 220 (327)
T 3aln_A 178 DSI---------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLY 220 (327)
T ss_dssp -------------------------------------CCSHHHHHHHHHHHH
T ss_pred ccc---------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHH
Confidence 221 122347999999999994321 112344699999999998
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-31 Score=291.61 Aligned_cols=177 Identities=20% Similarity=0.211 Sum_probs=132.5
Q ss_pred CCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhhhcc
Q 041467 481 NFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
.|...+.||+|+||+||. ||||++... ..+.+.+|+++++++ +|||||++++++.+.+..++||||+.
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 345568899999999974 999988643 234578999999886 89999999999999999999999995
Q ss_pred CCccc----cc--------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC-------------CcEE
Q 041467 552 NGQLR----LC--------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-------------VVTH 606 (746)
Q Consensus 552 ~g~l~----~~--------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~-------------~~~k 606 (746)
|+|. .. ..++..+..++.||+.||+|||+. +|+||||||+|||++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 6764 11 113345678999999999999999 99999999999999654 5899
Q ss_pred EccccccccccCCCCCCCcccccccccccccccccccccccccc----cccCCCccceeeccceee
Q 041467 607 VGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN----LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 607 i~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~~~~~DiwSlG~i~~ 668 (746)
|+|||+|+.+...... ........+||+.|+|||++.+.. ...++.++||||+||++|
T Consensus 169 L~DFG~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ 230 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSS----FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230 (434)
T ss_dssp ECCCTTCEECCC------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHH
T ss_pred EcccccceecCCCCcc----ceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHH
Confidence 9999999876433211 111223467999999999997621 122355799999999998
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-30 Score=281.58 Aligned_cols=176 Identities=22% Similarity=0.226 Sum_probs=145.9
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CC-----ceeeEEEEEecC
Q 041467 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HR-----NLIKIITICSSI 540 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-Hp-----nIv~l~~~~~~~ 540 (746)
....++|+..+.||+|+||.||+ ||||++... ....+.+.+|+++++.++ |+ +|+++++++...
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 34567899999999999999997 899998643 233456788999888885 44 499999999999
Q ss_pred CcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC--CCCcEEEcccc
Q 041467 541 DFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD--QDVVTHVGDLG 611 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~--~~~~~ki~DfG 611 (746)
+..++||||+.+ ++. ...+++..+..++.|++.|++|||++ ..+|+||||||+|||++ .++.+||+|||
T Consensus 129 ~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 129 NHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp TEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred CceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 999999999964 554 24589999999999999999999952 22899999999999994 57889999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+|+..... ....+||+.|+|||++.+..++. ++|||||||++|
T Consensus 207 ~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~---~~DiwSlG~il~ 249 (382)
T 2vx3_A 207 SSCQLGQR-----------IYQYIQSRFYRSPEVLLGMPYDL---AIDMWSLGCILV 249 (382)
T ss_dssp TCEETTCC-----------CCSSCSCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred Cceecccc-----------cccccCCccccChHHHcCCCCCc---HHHHHHHHHHHH
Confidence 99875321 22367999999999999887654 599999999998
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-31 Score=284.87 Aligned_cols=169 Identities=15% Similarity=0.130 Sum_probs=140.4
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhh--------hhhhHHHHHHHHHhhcCC---------CCceeeEE
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQ--------KEASRSFAAEFNALRNIR---------HRNLIKII 534 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------HpnIv~l~ 534 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++ |||||++.
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 46789999999999999997 8999987542 122367889999998886 77777777
Q ss_pred EEEe-----------------c-------------CCcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHH
Q 041467 535 TICS-----------------S-------------IDFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLR 580 (746)
Q Consensus 535 ~~~~-----------------~-------------~~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH 580 (746)
+++. + .+..++||||+++|++. ...+++.++..++.||+.||+|||
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH 178 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAE 178 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 7643 2 56889999999999653 456899999999999999999999
Q ss_pred -hcCCCCeEEcCCCCCCeeeCCCC--------------------cEEEccccccccccCCCCCCCccccccccccccccc
Q 041467 581 -HHCQPSIVHGDLKPSNILLDQDV--------------------VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639 (746)
Q Consensus 581 -~~~~~~ivHrDlkp~NILl~~~~--------------------~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~ 639 (746)
+. +|+||||||+|||++.++ .+||+|||+|+.... ...+||+.
T Consensus 179 ~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------------~~~~gt~~ 242 (336)
T 2vuw_A 179 ASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------------GIVVFCDV 242 (336)
T ss_dssp HHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------------TEEECCCC
T ss_pred HhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------------CcEEEeec
Confidence 88 999999999999999887 899999999987532 12579999
Q ss_pred ccccccccccccccCCCccceeecccee
Q 041467 640 YVAPVIIAARNLENREKRHTVMSFPQRF 667 (746)
Q Consensus 640 Y~aPE~~~~~~~~~~~~~~DiwSlG~i~ 667 (746)
|||||++.+.. +. ++||||+|++.
T Consensus 243 y~aPE~~~g~~-~~---~~Diwsl~~~~ 266 (336)
T 2vuw_A 243 SMDEDLFTGDG-DY---QFDIYRLMKKE 266 (336)
T ss_dssp TTCSGGGCCCS-SH---HHHHHHHHHHH
T ss_pred ccChhhhcCCC-cc---ceehhhhhCCC
Confidence 99999998765 33 59999998763
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-30 Score=302.49 Aligned_cols=170 Identities=22% Similarity=0.334 Sum_probs=147.0
Q ss_pred hcCCCCCCeEeecCCeeEEE----------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc-----
Q 041467 479 TNNFSPANKIREGGFNIVYN----------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF----- 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~----------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~----- 542 (746)
.++|++.+.||+|+||.||+ ||||++... .....+.+.+|++++++++|||||+++++|...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 36899999999999999997 899987543 23445678999999999999999999999988665
Q ss_pred ccchhhhccCCccc---ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 543 EGFDFKAISNGQLR---LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 543 ~~lv~e~~~~g~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
.|+||||+++++|. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.+ .+||+|||+++.....
T Consensus 159 ~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~ 234 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF 234 (681)
T ss_dssp EEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred eEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence 69999999999987 44789999999999999999999999 99999999999999875 9999999999875321
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....||+.|||||++.+.. +.++|||||||++|
T Consensus 235 ------------~~~~gt~~y~aPE~~~~~~----~~~sDi~slG~~l~ 267 (681)
T 2pzi_A 235 ------------GYLYGTPGFQAPEIVRTGP----TVATDIYTVGRTLA 267 (681)
T ss_dssp ------------SCCCCCTTTSCTTHHHHCS----CHHHHHHHHHHHHH
T ss_pred ------------CccCCCccccCHHHHcCCC----CCceehhhhHHHHH
Confidence 2367999999999987653 34699999999998
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-30 Score=278.22 Aligned_cols=172 Identities=21% Similarity=0.304 Sum_probs=146.4
Q ss_pred hcCCCCCCeEeecCCeeEEE----------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCc------eeeEEEEEecCCc
Q 041467 479 TNNFSPANKIREGGFNIVYN----------VAMKVANLKQKEASRSFAAEFNALRNIRHRN------LIKIITICSSIDF 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~----------vavK~~~~~~~~~~~~~~~E~~~l~~l~Hpn------Iv~l~~~~~~~~~ 542 (746)
.++|+..+.||+|+||.||+ ||||++... ....+.+.+|++++++++|++ |+.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 46899999999999999996 899998643 234567889999999998776 9999999999999
Q ss_pred ccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee-----------------
Q 041467 543 EGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL----------------- 599 (746)
Q Consensus 543 ~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl----------------- 599 (746)
.++||||+.++.+. ...+++.++..++.||+.||+|||+. +|+||||||+||++
T Consensus 97 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~ 173 (355)
T 2eu9_A 97 MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEE 173 (355)
T ss_dssp EEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred EEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccccc
Confidence 99999999554443 24689999999999999999999999 99999999999999
Q ss_pred --CCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 600 --DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 600 --~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.++.+||+|||+++..... .....||+.|+|||++.+..++. ++||||+||++|
T Consensus 174 ~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~il~ 230 (355)
T 2eu9_A 174 KSVKNTSIRVADFGSATFDHEH-----------HTTIVATRHYRPPEVILELGWAQ---PCDVWSIGCILF 230 (355)
T ss_dssp EEESCCCEEECCCTTCEETTSC-----------CCSSCSCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred cccCCCcEEEeecCcccccccc-----------ccCCcCCCcccCCeeeecCCCCC---ccchHHHHHHHH
Confidence 56789999999999864221 12367999999999998877655 499999999998
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-30 Score=275.55 Aligned_cols=188 Identities=21% Similarity=0.266 Sum_probs=146.7
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhh--hhhhhHHHHHHHHHhhcCC--CCceeeEEEEE
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLK--QKEASRSFAAEFNALRNIR--HRNLIKIITIC 537 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~--~~~~~~~~~~E~~~l~~l~--HpnIv~l~~~~ 537 (746)
+.+..+....++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 33444455667899999999999999997 899998643 2344567999999999997 49999999999
Q ss_pred ecCCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccc
Q 041467 538 SSIDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612 (746)
Q Consensus 538 ~~~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGl 612 (746)
...+..++||| +.+|++. ...+++.++..++.|++.||+|||+. +|+||||||+||++++ +.+||+|||+
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~ 172 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGI 172 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSS
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccc
Confidence 99999999999 5677775 45789999999999999999999999 9999999999999964 8999999999
Q ss_pred cccccCCCCCCCccccccccccccccccccccccccccc--------ccCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL--------ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~--------~~~~~~~DiwSlG~i~~ 668 (746)
++........ .......||+.|+|||++.+... ..++.++|||||||++|
T Consensus 173 ~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~ 230 (313)
T 3cek_A 173 ANQMQPDTTS------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 230 (313)
T ss_dssp SCC--------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHH
T ss_pred cccccCcccc------ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHH
Confidence 9876432211 11224579999999999976211 12345699999999998
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-30 Score=292.10 Aligned_cols=176 Identities=24% Similarity=0.384 Sum_probs=147.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEec------CC
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSS------ID 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~------~~ 541 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++|||||++++++.. .+
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 347899999999999999996 999998643 23445679999999999999999999999766 56
Q ss_pred cccchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc---EEEccc
Q 041467 542 FEGFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV---THVGDL 610 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~---~ki~Df 610 (746)
..++||||+++|+|. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 789999999999986 12589999999999999999999999 9999999999999986664 999999
Q ss_pred cccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 611 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+++...... ......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 169 G~a~~~~~~~---------~~~~~~gt~~Y~APE~l~~~~~s~k---sDIwSLGviLy 214 (676)
T 3qa8_A 169 GYAKELDQGE---------LCTEFVGTLQYLAPELLEQKKYTVT---VDYWSFGTLAF 214 (676)
T ss_dssp CCCCBTTSCC---------CCCCCCSCCTTCSSCSSCCSCCSTT---HHHHHHHHHHH
T ss_pred cccccccccc---------ccccccCCcccCChHHhccCCCCch---hHHHHHHHHHH
Confidence 9998763321 1234679999999999988777554 99999999998
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-30 Score=278.90 Aligned_cols=172 Identities=19% Similarity=0.303 Sum_probs=144.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-----------CCceeeEEEEEe
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-----------HRNLIKIITICS 538 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------HpnIv~l~~~~~ 538 (746)
.++|+..+.||+|+||.||+ ||||++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 46799999999999999997 899998643 233456889999999887 899999999998
Q ss_pred cCC----cccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC------C
Q 041467 539 SID----FEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD------Q 601 (746)
Q Consensus 539 ~~~----~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~------~ 601 (746)
..+ ..++|||++ +|++. ...+++..+..++.||+.||+|||+++ +|+||||||+||+++ .
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 754 688999999 77764 245899999999999999999999954 899999999999994 4
Q ss_pred CCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 602 DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 602 ~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.+.+||+|||+|+..... .....||+.|+|||++.+..++. ++|||||||++|
T Consensus 174 ~~~~kl~Dfg~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~---~~Di~slG~il~ 226 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH-----------YTNSIQTREYRSPEVLLGAPWGC---GADIWSTACLIF 226 (373)
T ss_dssp EEEEEECCCTTCEETTBC-----------CCSCCSCGGGCCHHHHHTCCCCT---HHHHHHHHHHHH
T ss_pred cceEEEcccccccccCCC-----------CCCCCCCccccCcHHHhCCCCCc---hHhHHHHHHHHH
Confidence 458999999999875321 12357899999999999887654 599999999998
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-30 Score=269.76 Aligned_cols=179 Identities=18% Similarity=0.237 Sum_probs=130.6
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.++..+++.++||||+++++++...+..++
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 3456788999999999999997 8999986442 2223345556667888999999999999999999999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRH-HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
||||+ ++.+. ...+++..+..++.|++.|++|||+ . +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 v~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp EECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 99999 33332 3578999999999999999999998 5 899999999999999999999999999976532
Q ss_pred CCCCCCcccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
.. ......||+.|+|||++.... ...++.++||||+||++|
T Consensus 178 ~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~ 220 (318)
T 2dyl_A 178 DK---------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLV 220 (318)
T ss_dssp ------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHH
T ss_pred Cc---------cccccCCCccccChhhcccccccccCCccccchhhHHHHHH
Confidence 21 122357899999999996321 112345699999999998
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-30 Score=275.19 Aligned_cols=171 Identities=19% Similarity=0.234 Sum_probs=123.1
Q ss_pred hhcCCCCC-CeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec----CCcc
Q 041467 478 ATNNFSPA-NKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS----IDFE 543 (746)
Q Consensus 478 ~~~~~~~~-~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----~~~~ 543 (746)
..++|... +.||+|+||.||+ ||||++.... +...+....++.++||||+++++++.. ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 45678885 4699999999997 8999985321 112222334667799999999999876 3458
Q ss_pred cchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEcccccc
Q 041467 544 GFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGDLGLA 613 (746)
Q Consensus 544 ~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DfGla 613 (746)
++||||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 9999999999985 23689999999999999999999999 9999999999999975 456999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+..... ......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 179 ~~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~ 220 (336)
T 3fhr_A 179 KETTQN----------ALQTPCYTPYYVAPEVLGPEKYDKS---CDMWSLGVIMY 220 (336)
T ss_dssp EEC--------------------------------CHHHHH---HHHHHHHHHHH
T ss_pred eecccc----------ccccCCCCcCccChhhhCCCCCCch---hhHHHHHHHHH
Confidence 865321 1223678999999999987777655 99999999998
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-28 Score=255.17 Aligned_cols=242 Identities=20% Similarity=0.227 Sum_probs=202.4
Q ss_pred cEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCC--ccchhhcCCCCCCEEEcc
Q 041467 21 RYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVR--DILTEICSLFKLERLRID 98 (746)
Q Consensus 21 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~l~ 98 (746)
+.++.+++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.+.. ..+..+..+++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 57888888887 6666553 578888888888885444457888888888888888753 236677778888888888
Q ss_pred CCCCc---CcccCCCCCCEEeccCCCcc------cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCC
Q 041467 99 CGGRI---DSLGHLKSLLLLSLAFNQFL------SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGT 169 (746)
Q Consensus 99 ~~~~~---~~~~~l~~L~~L~Ls~N~l~------~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 169 (746)
++... ..+.++++|+.|++++|++. .+..+++|++|++++|++++..+..|..+++|++|+|++|.+++.
T Consensus 87 ~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~- 165 (306)
T 2z66_A 87 FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN- 165 (306)
T ss_dssp SCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG-
T ss_pred CCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc-
Confidence 76533 45778899999999999884 356788999999999999999999999999999999999998641
Q ss_pred CCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCC
Q 041467 170 ANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIP 249 (746)
Q Consensus 170 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 249 (746)
..|..+..+++|++|++++|++++..|..+..++ +|+.|++++|++++..+..|..+++|++|+|++|++.+..|
T Consensus 166 ----~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 240 (306)
T 2z66_A 166 ----FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS-SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKK 240 (306)
T ss_dssp ----EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT-TCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSS
T ss_pred ----cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCC-CCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCH
Confidence 2566788999999999999999988888898887 79999999999998777789999999999999999999999
Q ss_pred cCCCCCC-CCceeeccccccccc
Q 041467 250 PLIGETP-NLQLLNIGGNHLQGS 271 (746)
Q Consensus 250 ~~~~~l~-~L~~L~Ls~N~l~~~ 271 (746)
..+..++ +|++|+|++|.+++.
T Consensus 241 ~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 241 QELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp SSCCCCCTTCCEEECTTCCEECS
T ss_pred HHHHhhhccCCEEEccCCCeecc
Confidence 9999985 999999999999853
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=266.09 Aligned_cols=268 Identities=18% Similarity=0.135 Sum_probs=204.2
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
..++.++++.+.+...++..+..+++|++|+|++|++++..|..|.++++|++|+|++|.+.+..+
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-------------- 75 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-------------- 75 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--------------
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--------------
Confidence 457888999999876666677788899999999999998777899999999999999998854332
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFIN 177 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 177 (746)
+..+++|++|+|++|++..+...++|+.|++++|++++..+.. +++|++|++++|.+++ ..+.
T Consensus 76 --------~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~------~~~~ 138 (317)
T 3o53_A 76 --------LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITM------LRDL 138 (317)
T ss_dssp --------ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCS------GGGB
T ss_pred --------hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCC------ccch
Confidence 4556777777888888877777788888888888888765543 5778888888888876 3344
Q ss_pred cccCCCCCCEEEcccccccccCChhhh-hcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCC
Q 041467 178 LLTNCSKLERLYFNRNGFEGVLPHSIA-NLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETP 256 (746)
Q Consensus 178 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 256 (746)
.+..+++|++|+|++|.+++..|..+. .+. +|++|++++|+|++. | ....+++|++|+|++|++.+. |..+..++
T Consensus 139 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~-~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~ 214 (317)
T 3o53_A 139 DEGCRSRVQYLDLKLNEIDTVNFAELAASSD-TLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAA 214 (317)
T ss_dssp CTGGGSSEEEEECTTSCCCEEEGGGGGGGTT-TCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGT
T ss_pred hhhccCCCCEEECCCCCCCcccHHHHhhccC-cCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcc-hhhhcccC
Confidence 567778888888888888877666664 454 688888888888764 3 233478888888888888754 44577888
Q ss_pred CCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCc-cccchhhhhcccccceEEcc-
Q 041467 257 NLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT-STLPQQILSVTTLSLYLELD- 334 (746)
Q Consensus 257 ~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~l~~~L~Ls- 334 (746)
+|+.|+|++|+++ .+|..+..+++|+.|++++|.++ +.+|..+..++.+ +.|+++
T Consensus 215 ~L~~L~L~~N~l~----------------------~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L-~~l~l~~ 271 (317)
T 3o53_A 215 GVTWISLRNNKLV----------------------LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV-QTVAKQT 271 (317)
T ss_dssp TCSEEECTTSCCC----------------------EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHH-HHHHHHH
T ss_pred cccEEECcCCccc----------------------chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccc-eEEECCC
Confidence 8888888888776 34556677788888888888887 6777777777777 567777
Q ss_pred CccccccCc
Q 041467 335 NNLLNGSLP 343 (746)
Q Consensus 335 ~N~l~~~~p 343 (746)
.+.+.|..|
T Consensus 272 ~~~l~~~~~ 280 (317)
T 3o53_A 272 VKKLTGQNE 280 (317)
T ss_dssp HHHHHSSSS
T ss_pred chhccCCch
Confidence 444555444
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-29 Score=266.40 Aligned_cols=284 Identities=22% Similarity=0.264 Sum_probs=157.2
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
++.....++++|.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+.+..|..|.++
T Consensus 30 C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l------- 99 (353)
T 2z80_A 30 CDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL------- 99 (353)
T ss_dssp ECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC-------
T ss_pred CCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCC-------
Confidence 455667999999998 7887765 489999999999997666689999999999999998876555444333
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccc
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 176 (746)
++|++|+|++|++++..+..|+.+++|++|+|++|.++..+. .
T Consensus 100 --------------------------------~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~-----~ 142 (353)
T 2z80_A 100 --------------------------------GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGE-----T 142 (353)
T ss_dssp --------------------------------TTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCS-----S
T ss_pred --------------------------------CCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCc-----h
Confidence 333344444444443333335555555555555555543111 0
Q ss_pred ccccCCCCCCEEEcccc-cccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCC
Q 041467 177 NLLTNCSKLERLYFNRN-GFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGET 255 (746)
Q Consensus 177 ~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 255 (746)
..+..+++|++|++++| .+.+..|..+..++ +|+.|++++|++++..|..|.++++|++|++++|++....+..+..+
T Consensus 143 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~ 221 (353)
T 2z80_A 143 SLFSHLTKLQILRVGNMDTFTKIQRKDFAGLT-FLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVT 221 (353)
T ss_dssp CSCTTCTTCCEEEEEESSSCCEECTTTTTTCC-EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHT
T ss_pred hhhccCCCCcEEECCCCccccccCHHHccCCC-CCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhc
Confidence 13445555555555555 24433344455554 45555555555555555555555555555555555542222223345
Q ss_pred CCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCcc----ccchhhhhcccccceE
Q 041467 256 PNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTS----TLPQQILSVTTLSLYL 331 (746)
Q Consensus 256 ~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~l~~~L 331 (746)
++|+.|++++|.+++..+..+.. ......++.++|++|.+++ .+|..+..+++| +.|
T Consensus 222 ~~L~~L~L~~n~l~~~~~~~l~~------------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L-~~L 282 (353)
T 2z80_A 222 SSVECLELRDTDLDTFHFSELST------------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGL-LEL 282 (353)
T ss_dssp TTEEEEEEESCBCTTCCCC------------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTC-CEE
T ss_pred ccccEEECCCCcccccccccccc------------------ccccchhhccccccccccCcchhhhHHHHhcccCC-CEE
Confidence 55556666655555433222111 1122334445555555443 345555555555 356
Q ss_pred EccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCC
Q 041467 332 ELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVP 382 (746)
Q Consensus 332 ~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p 382 (746)
++++|+++ .+|..+ +..+++|+.|++++|++++..|
T Consensus 283 ~Ls~N~l~-~i~~~~--------------~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 283 EFSRNQLK-SVPDGI--------------FDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp ECCSSCCC-CCCTTT--------------TTTCTTCCEEECCSSCBCCCHH
T ss_pred ECCCCCCC-ccCHHH--------------HhcCCCCCEEEeeCCCccCcCC
Confidence 66666655 344332 1233445556666666665554
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-28 Score=258.87 Aligned_cols=235 Identities=17% Similarity=0.219 Sum_probs=196.0
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
.+.+++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..|+++++|++|+|++|.+. .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 378999999999998 88999999999999999999999 89999999999999999999997 7788888888888888
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccc
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 176 (746)
+++|.....+.. .+....+. ..+.++++|+.|+|++|+|+ .+|..|+.+++|++|+|++|.+++ +|
T Consensus 157 L~~n~~~~~~p~--~~~~~~~~----~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-------l~ 222 (328)
T 4fcg_A 157 IRACPELTELPE--PLASTDAS----GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-------LG 222 (328)
T ss_dssp EEEETTCCCCCS--CSEEEC-C----CCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-------CC
T ss_pred CCCCCCccccCh--hHhhccch----hhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-------Cc
Confidence 876543322211 01111111 23556888899999999988 677788899999999999999875 44
Q ss_pred ccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCC
Q 041467 177 NLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETP 256 (746)
Q Consensus 177 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 256 (746)
..+..+++|++|+|++|.+.+.+|..+..++ +|+.|++++|++.+.+|..|+++++|++|+|++|++.+.+|..+++++
T Consensus 223 ~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~-~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~ 301 (328)
T 4fcg_A 223 PAIHHLPKLEELDLRGCTALRNYPPIFGGRA-PLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLP 301 (328)
T ss_dssp GGGGGCTTCCEEECTTCTTCCBCCCCTTCCC-CCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSC
T ss_pred hhhccCCCCCEEECcCCcchhhhHHHhcCCC-CCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhcc
Confidence 5678889999999999988888898888887 799999999988888998899999999999999999999999999999
Q ss_pred CCceeeccccccc
Q 041467 257 NLQLLNIGGNHLQ 269 (746)
Q Consensus 257 ~L~~L~Ls~N~l~ 269 (746)
+|+.+++..|.+.
T Consensus 302 ~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 302 ANCIILVPPHLQA 314 (328)
T ss_dssp TTCEEECCGGGSC
T ss_pred CceEEeCCHHHHH
Confidence 9999998887765
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=264.04 Aligned_cols=273 Identities=18% Similarity=0.198 Sum_probs=206.0
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 82 (746)
+|++.++|.... ++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+.+..
T Consensus 40 ~~~l~~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 116 (353)
T 2z80_A 40 SGSLNSIPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLS 116 (353)
T ss_dssp STTCSSCCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCC
T ss_pred CCCccccccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCC
Confidence 455555555332 47889999999998766668899999999999999998877888999999999999999886543
Q ss_pred chhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCC-ccccCCCCCCEEEcc
Q 041467 83 LTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVS-VDFSRLKNLSWLNLG 161 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls 161 (746)
+..+ .++++|++|+|++|++++..+ ..|..+++|++|+++
T Consensus 117 ~~~~---------------------------------------~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~ 157 (353)
T 2z80_A 117 SSWF---------------------------------------KPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVG 157 (353)
T ss_dssp HHHH---------------------------------------TTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEE
T ss_pred HhHh---------------------------------------CCCccCCEEECCCCCCcccCchhhhccCCCCcEEECC
Confidence 3323 344566667777777775554 578889999999999
Q ss_pred CCC-CCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecc
Q 041467 162 VNN-LGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTME 240 (746)
Q Consensus 162 ~N~-l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~ 240 (746)
+|. ++. ..+..|.++++|++|++++|++++..|..+..+. +|++|++++|+++...+..+..+++|++|+++
T Consensus 158 ~n~~~~~------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~-~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~ 230 (353)
T 2z80_A 158 NMDTFTK------IQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQ-NVSHLILHMKQHILLLEIFVDVTSSVECLELR 230 (353)
T ss_dssp ESSSCCE------ECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCS-EEEEEEEECSCSTTHHHHHHHHTTTEEEEEEE
T ss_pred CCccccc------cCHHHccCCCCCCEEECCCCCcCccCHHHHhccc-cCCeecCCCCccccchhhhhhhcccccEEECC
Confidence 884 554 2345678889999999999999888888888887 79999999999875333345568899999999
Q ss_pred cccceecCCcCCC---CCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCcccc
Q 041467 241 SSQLIGTIPPLIG---ETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTL 317 (746)
Q Consensus 241 ~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 317 (746)
+|++.+..+..+. ..+.++.++|++|.+.+. .+. .+|..+..+++|+.|++++|+++ .+
T Consensus 231 ~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~----------------~l~-~l~~~l~~l~~L~~L~Ls~N~l~-~i 292 (353)
T 2z80_A 231 DTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE----------------SLF-QVMKLLNQISGLLELEFSRNQLK-SV 292 (353)
T ss_dssp SCBCTTCCCC------CCCCCCEEEEESCBCCHH----------------HHH-HHHHHHHTCTTCCEEECCSSCCC-CC
T ss_pred CCccccccccccccccccchhhccccccccccCc----------------chh-hhHHHHhcccCCCEEECCCCCCC-cc
Confidence 9998876554433 456788888888877632 111 35677888889999999999998 67
Q ss_pred chhh-hhcccccceEEccCccccccCc
Q 041467 318 PQQI-LSVTTLSLYLELDNNLLNGSLP 343 (746)
Q Consensus 318 p~~~-~~l~~l~~~L~Ls~N~l~~~~p 343 (746)
|..+ ..+++| ++|++++|++++..|
T Consensus 293 ~~~~~~~l~~L-~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 293 PDGIFDRLTSL-QKIWLHTNPWDCSCP 318 (353)
T ss_dssp CTTTTTTCTTC-CEEECCSSCBCCCHH
T ss_pred CHHHHhcCCCC-CEEEeeCCCccCcCC
Confidence 7775 678888 689999999886554
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.95 E-value=6.9e-31 Score=292.63 Aligned_cols=352 Identities=17% Similarity=0.124 Sum_probs=266.7
Q ss_pred ccccccccEEecccCcCcc----cCchhhhCCccCcEEecccCcCCccCCccc-cCCC----CCCeeeCcCCCCCC----
Q 041467 14 CILRTFLRYINLVNNGFNG----EIPHQIGRLISLERLILSNNSFSCAIPANL-SSGS----NLIKLSTDSNNLVR---- 80 (746)
Q Consensus 14 ~~~~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~----~L~~L~L~~N~l~~---- 80 (746)
+..+++|++|+|++|.++. .++..+..+++|++|+|++|.++...+..+ ..++ +|++|+|++|.+..
T Consensus 24 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~ 103 (461)
T 1z7x_W 24 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 103 (461)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH
T ss_pred HhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHH
Confidence 4557899999999999974 467888999999999999999986544443 3455 79999999999874
Q ss_pred ccchhhcCCCCCCEEEccCCCCc----Cc-----ccCCCCCCEEeccCCCccc---------ccCCCCCcEeeCccCccc
Q 041467 81 DILTEICSLFKLERLRIDCGGRI----DS-----LGHLKSLLLLSLAFNQFLS---------LSNASSLEMIEFSRNQFS 142 (746)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~~~~~----~~-----~~~l~~L~~L~Ls~N~l~~---------l~~l~~L~~L~Ls~N~l~ 142 (746)
.++..+..+++|++|+++++... .. ....++|+.|+|++|++.. +..+++|+.|+|++|.++
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcc
Confidence 56889999999999999987643 11 2346789999999999853 346799999999999998
Q ss_pred ccCCcccc-----CCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhh-----hcccccce
Q 041467 143 GGVSVDFS-----RLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIA-----NLSSTIKQ 212 (746)
Q Consensus 143 ~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~~L~~ 212 (746)
...+..+. .+++|++|+|++|.++.... ..++..+..+++|++|++++|.+++.....+. .++ +|+.
T Consensus 184 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~--~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~-~L~~ 260 (461)
T 1z7x_W 184 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNC--RDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSS-RLRT 260 (461)
T ss_dssp HHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHH--HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTC-CCCE
T ss_pred hHHHHHHHHHHhcCCCCceEEEccCCCCcHHHH--HHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCC-CceE
Confidence 65555443 36799999999999875211 12566778899999999999998754322222 344 7999
Q ss_pred EEcccCccccc----CCccccCCCCCCeeecccccceecCCcCCC-----CCCCCceeeccccccccc----cccc---c
Q 041467 213 IAMGSNRISST----IPHGIRNLVNLNWLTMESSQLIGTIPPLIG-----ETPNLQLLNIGGNHLQGS----ILSS---L 276 (746)
Q Consensus 213 L~l~~N~i~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~~~~---l 276 (746)
|++++|+++.. ++..+.++++|++|++++|.+.+..+..+. ..++|++|+|++|.+++. ++.. .
T Consensus 261 L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 340 (461)
T 1z7x_W 261 LWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQN 340 (461)
T ss_dssp EECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHC
T ss_pred EECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhC
Confidence 99999999864 677888899999999999998754433332 337999999999999865 3333 3
Q ss_pred cccChHHhhhccCCCCCCccccC-----CCCCCeeeecCCcCcc----ccchhhhhcccccceEEccCccccccCchhhh
Q 041467 277 GNLTLQTYLFNNLQGNIPSSLAN-----CKSLLGLSVSHNKLTS----TLPQQILSVTTLSLYLELDNNLLNGSLPPEVG 347 (746)
Q Consensus 277 ~~l~~l~~l~n~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~ 347 (746)
.+|+.+++.+|.+.+..+..+.. .++|++|+|++|++++ .+|..+..+++| ++|++++|++++.-...+.
T Consensus 341 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L-~~L~l~~N~i~~~~~~~l~ 419 (461)
T 1z7x_W 341 RFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSL-RELDLSNNCLGDAGILQLV 419 (461)
T ss_dssp SSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCC-CEEECCSSSCCHHHHHHHH
T ss_pred CCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCc-cEEECCCCCCCHHHHHHHH
Confidence 56677777788887665555543 6799999999999986 789999999999 6899999999854222222
Q ss_pred cccCCceeecCCCCCCCCCCCEEEccCCcCcc
Q 041467 348 NLKNLLRLHIPEYPENLSFFELLNLSYNYFGS 379 (746)
Q Consensus 348 ~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~ 379 (746)
. .+|. ....|+.|++.++.+..
T Consensus 420 ~-------~l~~---~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 420 E-------SVRQ---PGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp H-------HHTS---TTCCCCEEECTTCCCCH
T ss_pred H-------Hhcc---CCcchhheeecccccCH
Confidence 1 1121 23456777777666654
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=251.31 Aligned_cols=197 Identities=21% Similarity=0.277 Sum_probs=114.0
Q ss_pred CcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCc------CcccCCCCCCEEec
Q 041467 44 LERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRI------DSLGHLKSLLLLSL 117 (746)
Q Consensus 44 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~------~~~~~l~~L~~L~L 117 (746)
-+.++.+++.++ .+|..+. ++|++|+|++|.+....+..+.++++|++|+++++... ..+.
T Consensus 9 ~~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~---------- 75 (306)
T 2z66_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDF---------- 75 (306)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHH----------
T ss_pred CCEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccc----------
Confidence 367999999998 5787664 68999999999986544344555655555555544321 1222
Q ss_pred cCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccc
Q 041467 118 AFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG 197 (746)
Q Consensus 118 s~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 197 (746)
.+++|++|+|++|.+++ +|..|..+++|++|++++|.+++... ...+..+++|++|++++|.+++
T Consensus 76 ---------~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~-----~~~~~~l~~L~~L~l~~n~l~~ 140 (306)
T 2z66_A 76 ---------GTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSE-----FSVFLSLRNLIYLDISHTHTRV 140 (306)
T ss_dssp ---------SCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTT-----TTTTTTCTTCCEEECTTSCCEE
T ss_pred ---------cccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCccccccc-----chhhhhccCCCEEECCCCcCCc
Confidence 34555555555555552 33345555555555555555543211 1234555555555555555555
Q ss_pred cCChhhhhcccccceEEcccCcccc-cCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 198 VLPHSIANLSSTIKQIAMGSNRISS-TIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 198 ~~p~~~~~l~~~L~~L~l~~N~i~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
..|..+..++ +|++|++++|.+++ .+|..|..+++|++|++++|++.+..|..|..+++|+.|+|++|+++
T Consensus 141 ~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (306)
T 2z66_A 141 AFNGIFNGLS-SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 212 (306)
T ss_dssp CSTTTTTTCT-TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred cchhhcccCc-CCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccC
Confidence 5555555554 45555555555554 35555555556666666666555555555555556666666655554
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=262.47 Aligned_cols=240 Identities=21% Similarity=0.198 Sum_probs=208.5
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
...+.++.+++.++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|.+.+..+..|.++++|++|+|
T Consensus 54 ~~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 54 NQFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 34678888888887 6776654 58889999999998877888888999999999999888777788888889999988
Q ss_pred cCCCCc----CcccCCCCCCEEeccCCCccc-----ccCCCCCcEeeCcc-CcccccCCccccCCCCCCEEEccCCCCCC
Q 041467 98 DCGGRI----DSLGHLKSLLLLSLAFNQFLS-----LSNASSLEMIEFSR-NQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167 (746)
Q Consensus 98 ~~~~~~----~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (746)
++|... ..|.++++|+.|+|++|++.. |.++++|+.|+|++ |.+....+..|.++++|++|+|++|.+++
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 876533 457889999999999999954 56789999999998 66766666789999999999999999986
Q ss_pred CCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceec
Q 041467 168 GTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGT 247 (746)
Q Consensus 168 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~ 247 (746)
. | .+..+++|+.|+|++|.+++..|..|..+. +|+.|++++|++++..|..|.++++|+.|+|++|++++.
T Consensus 211 ~-------~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 281 (452)
T 3zyi_A 211 M-------P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLS-SLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281 (452)
T ss_dssp C-------C-CCTTCTTCCEEECTTSCCSEECGGGGTTCT-TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred c-------c-cccccccccEEECcCCcCcccCcccccCcc-CCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCcc
Confidence 3 2 377899999999999999998899999998 799999999999999999999999999999999999988
Q ss_pred CCcCCCCCCCCceeeccccccc
Q 041467 248 IPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 248 ~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
.+..|..+++|+.|+|++|.+.
T Consensus 282 ~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 282 PHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CTTSSTTCTTCCEEECCSSCEE
T ss_pred ChHHhccccCCCEEEccCCCcC
Confidence 8888999999999999999886
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-27 Score=260.85 Aligned_cols=245 Identities=20% Similarity=0.201 Sum_probs=212.4
Q ss_pred cccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCC
Q 041467 13 LCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKL 92 (746)
Q Consensus 13 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 92 (746)
.|......+.++.+++.++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.+.+..+..|.++++|
T Consensus 38 ~C~C~~~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L 114 (440)
T 3zyj_A 38 VCSCSNQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANL 114 (440)
T ss_dssp SSEECTTSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSC
T ss_pred CCEeCCCCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccC
Confidence 3443345678899999987 7787665 688999999999998778889999999999999999988777889999999
Q ss_pred CEEEccCCCCc----CcccCCCCCCEEeccCCCccc-----ccCCCCCcEeeCcc-CcccccCCccccCCCCCCEEEccC
Q 041467 93 ERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLS-----LSNASSLEMIEFSR-NQFSGGVSVDFSRLKNLSWLNLGV 162 (746)
Q Consensus 93 ~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~ 162 (746)
++|+|++|... ..|.++++|+.|+|++|++.. |.++++|+.|+|++ |.+....+..|.++++|++|+|++
T Consensus 115 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~ 194 (440)
T 3zyj_A 115 NTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAM 194 (440)
T ss_dssp CEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTT
T ss_pred CEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCC
Confidence 99999886543 458889999999999999954 56789999999998 566666667899999999999999
Q ss_pred CCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccc
Q 041467 163 NNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS 242 (746)
Q Consensus 163 N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N 242 (746)
|.++.. | .+..+++|+.|+|++|++++..|..|..+. +|+.|++++|+|++..+..|.++++|++|+|++|
T Consensus 195 n~l~~~-------~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 265 (440)
T 3zyj_A 195 CNLREI-------P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLM-HLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHN 265 (440)
T ss_dssp SCCSSC-------C-CCTTCSSCCEEECTTSCCCEECTTTTTTCT-TCCEEECTTCCCCEECTTSSTTCTTCCEEECTTS
T ss_pred CcCccc-------c-ccCCCcccCEEECCCCccCccChhhhccCc-cCCEEECCCCceeEEChhhhcCCCCCCEEECCCC
Confidence 999853 3 377899999999999999988899999997 7999999999999988999999999999999999
Q ss_pred cceecCCcCCCCCCCCceeeccccccc
Q 041467 243 QLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 243 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
++++..+..|..+++|+.|+|++|.+.
T Consensus 266 ~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 266 NLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCCccChhHhccccCCCEEEcCCCCcc
Confidence 999888888999999999999999886
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=253.93 Aligned_cols=232 Identities=19% Similarity=0.251 Sum_probs=164.5
Q ss_pred CccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCC
Q 041467 41 LISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFN 120 (746)
Q Consensus 41 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N 120 (746)
..+++.|+|++|.++ .+|..++++++|++|+|++|.+. .+|..+++
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~-------------------------------- 125 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQ-------------------------------- 125 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGG--------------------------------
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhc--------------------------------
Confidence 478999999999998 68888888999999999999886 56654433
Q ss_pred CcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCc---cccccccCCCCCCEEEcccccccc
Q 041467 121 QFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANEL---DFINLLTNCSKLERLYFNRNGFEG 197 (746)
Q Consensus 121 ~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~~~~~~~l~~L~~L~Ls~N~l~~ 197 (746)
+++|++|+|++|+++ .+|..|+.+++|++|+|++|++.+..+..+ ..+..+.++++|++|+|++|+++
T Consensus 126 -------l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~- 196 (328)
T 4fcg_A 126 -------FAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR- 196 (328)
T ss_dssp -------GTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-
T ss_pred -------cCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-
Confidence 334444555555555 445566666667777776655544222111 01122445778888888888887
Q ss_pred cCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccccccccc
Q 041467 198 VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLG 277 (746)
Q Consensus 198 ~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 277 (746)
.+|..+..++ +|+.|++++|++++ +|..|+.+++|++|+|++|++.+.+|..++.+++|++|+|++|.+.+
T Consensus 197 ~lp~~l~~l~-~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~------- 267 (328)
T 4fcg_A 197 SLPASIANLQ-NLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL------- 267 (328)
T ss_dssp CCCGGGGGCT-TCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCC-------
T ss_pred cchHhhcCCC-CCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchh-------
Confidence 6777777776 68888888888875 66677888888888888888888888888888888888888776553
Q ss_pred ccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCcccc
Q 041467 278 NLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLN 339 (746)
Q Consensus 278 ~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~ 339 (746)
.+|..++++++|+.|+|++|++.+.+|..+..++++ ..+++..|.+.
T Consensus 268 --------------~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L-~~l~l~~~~~~ 314 (328)
T 4fcg_A 268 --------------TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN-CIILVPPHLQA 314 (328)
T ss_dssp --------------BCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTT-CEEECCGGGSC
T ss_pred --------------hcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCc-eEEeCCHHHHH
Confidence 455566677777888888877777778777777777 46777666554
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.7e-29 Score=281.79 Aligned_cols=152 Identities=11% Similarity=0.028 Sum_probs=113.9
Q ss_pred EEeehhhhh----------hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhhhccCCccc-----ccCCCH
Q 041467 499 VAMKVANLK----------QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAISNGQLR-----LCNLSL 562 (746)
Q Consensus 499 vavK~~~~~----------~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~-----~~~l~~ 562 (746)
||||++... .....++|.+|+++|+++ .||||+++++++++.+..|+||||++||+|. ...++.
T Consensus 262 ~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~ 341 (569)
T 4azs_A 262 YVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDR 341 (569)
T ss_dssp EEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCH
T ss_pred eEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCH
Confidence 788877532 233456799999999999 6999999999999999999999999999996 345554
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccc
Q 041467 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642 (746)
Q Consensus 563 ~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 642 (746)
. +|+.||+.||+|+|++ +||||||||+|||++++|++||+|||+|+...... ....+.+||++|||
T Consensus 342 ~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~--------~~~~t~vGTp~YmA 407 (569)
T 4azs_A 342 E---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC--------SWPTNLVQSFFVFV 407 (569)
T ss_dssp H---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-----------CCSHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCC--------ccccCceechhhcc
Confidence 3 5899999999999999 99999999999999999999999999998764321 22345789999999
Q ss_pred cccccccccccCCCccceeeccceee
Q 041467 643 PVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 643 PE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
||++.+.. . .++|+||+|++++
T Consensus 408 PE~l~g~~-~---~~~d~~s~g~~~~ 429 (569)
T 4azs_A 408 NELFAENK-S---WNGFWRSAPVHPF 429 (569)
T ss_dssp HHHC---------------------C
T ss_pred HHHhCCCC-C---Ccccccccccchh
Confidence 99998753 2 2499999999887
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.1e-27 Score=265.42 Aligned_cols=268 Identities=24% Similarity=0.257 Sum_probs=173.5
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
..+++|++++|.|+ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|++.+ +|. .+++|++|++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 45899999999998 7888776 79999999999999 5676 57899999999999854 554 5667777777
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCccccc-CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLSLS-NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 176 (746)
++|.....-..+++|+.|++++|++..++ .+++|+.|+|++|++++. |. .+++|+.|++++|.++.. |
T Consensus 109 s~N~l~~l~~~l~~L~~L~L~~N~l~~lp~~l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~l-------~ 177 (622)
T 3g06_A 109 FSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTSL-------P 177 (622)
T ss_dssp CSCCCCCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSCC-------C
T ss_pred cCCcCCCCCCCCCCcCEEECCCCCCCcCCCCCCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCCC-------c
Confidence 66543322224556666666666665543 235666666666666543 22 235566666666666542 2
Q ss_pred ccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCC
Q 041467 177 NLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETP 256 (746)
Q Consensus 177 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 256 (746)
..+++|+.|++++|.+++ +|.. + .+|+.|++++|.++. +|.. +++|+.|+|++|++++ +| ..++
T Consensus 178 ---~~~~~L~~L~Ls~N~l~~-l~~~---~-~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~ 241 (622)
T 3g06_A 178 ---MLPSGLQELSVSDNQLAS-LPTL---P-SELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLPS 241 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCCC---C-TTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCCT
T ss_pred ---ccCCCCcEEECCCCCCCC-CCCc---c-chhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCCC
Confidence 234556666666666653 3332 1 246666666666653 4432 3556666666666653 33 2345
Q ss_pred CCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCc
Q 041467 257 NLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNN 336 (746)
Q Consensus 257 ~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N 336 (746)
+|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+..+++| +.|+|++|
T Consensus 242 ~L~~L~Ls~N~L~----------------------~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L-~~L~L~~N 294 (622)
T 3g06_A 242 ELKELMVSGNRLT----------------------SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSE-TTVNLEGN 294 (622)
T ss_dssp TCCEEECCSSCCS----------------------CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTT-CEEECCSC
T ss_pred cCcEEECCCCCCC----------------------cCCc---ccccCcEEeCCCCCCC-cCCHHHhhcccc-CEEEecCC
Confidence 5666666666555 2333 4567778888888887 677777777777 57888888
Q ss_pred cccccCchhhhccc
Q 041467 337 LLNGSLPPEVGNLK 350 (746)
Q Consensus 337 ~l~~~~p~~~~~l~ 350 (746)
++++..|..+..++
T Consensus 295 ~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 295 PLSERTLQALREIT 308 (622)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCCcCHHHHHhcc
Confidence 88877777766554
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-27 Score=246.96 Aligned_cols=227 Identities=21% Similarity=0.244 Sum_probs=183.6
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccC
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 99 (746)
-+.++.+++.++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|.+.+..|..+.++++|++|+++.
T Consensus 13 ~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 13 KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 478999999997 677655 46899999999999987778899999999999999988766666665555555554444
Q ss_pred CCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccc
Q 041467 100 GGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLL 179 (746)
Q Consensus 100 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 179 (746)
+..+..+. -..+..+++|++|++++|++++..+..|..+++|++|+|++|.++..+ +..|
T Consensus 90 n~~l~~~~--------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------~~~~ 149 (285)
T 1ozn_A 90 NAQLRSVD--------------PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALP------DDTF 149 (285)
T ss_dssp CTTCCCCC--------------TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC------TTTT
T ss_pred CCCccccC--------------HHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccC------HhHh
Confidence 32111000 023556788889999999999888888999999999999999998632 3457
Q ss_pred cCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCc
Q 041467 180 TNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQ 259 (746)
Q Consensus 180 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 259 (746)
..+++|++|+|++|++++..+..+..+. +|+.|++++|++++..|..|.++++|+.|++++|++.+..+..+..+++|+
T Consensus 150 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 228 (285)
T 1ozn_A 150 RDLGNLTHLFLHGNRISSVPERAFRGLH-SLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ 228 (285)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCC
T ss_pred ccCCCccEEECCCCcccccCHHHhcCcc-ccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccC
Confidence 8889999999999999876666788887 799999999999988899999999999999999999987777799999999
Q ss_pred eeecccccccc
Q 041467 260 LLNIGGNHLQG 270 (746)
Q Consensus 260 ~L~Ls~N~l~~ 270 (746)
.|+|++|.+..
T Consensus 229 ~L~l~~N~~~c 239 (285)
T 1ozn_A 229 YLRLNDNPWVC 239 (285)
T ss_dssp EEECCSSCEEC
T ss_pred EEeccCCCccC
Confidence 99999999875
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.7e-29 Score=261.00 Aligned_cols=223 Identities=16% Similarity=0.155 Sum_probs=106.4
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcC-CccCCcccc-------CCCCCCeeeCcCCCCCCccchhhcC
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSF-SCAIPANLS-------SGSNLIKLSTDSNNLVRDILTEICS 88 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~ 88 (746)
.++|++|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|.+.+.+|..+.
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~- 116 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL- 116 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS-
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH-
Confidence 35566677777776 566655543 66677777776 334555544 566677777776666655554320
Q ss_pred CCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcccc----cCC-----CCCcEeeCccCcccccCCccccCCCCCCEEE
Q 041467 89 LFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSL----SNA-----SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLN 159 (746)
Q Consensus 89 l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l----~~l-----~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 159 (746)
+..+++|+.|+|++|++..+ ..+ ++|++|+|++|++++..+..|+.+++|++|+
T Consensus 117 -----------------~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 179 (312)
T 1wwl_A 117 -----------------EATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLD 179 (312)
T ss_dssp -----------------SCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEE
T ss_pred -----------------HhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEE
Confidence 13334444444444444221 112 5555555555555555555555555555555
Q ss_pred ccCCCCCCCCCCCccccccc--cCCCCCCEEEcccccccc--cCChh-hhhcccccceEEcccCcccccCC-ccccCCCC
Q 041467 160 LGVNNLGSGTANELDFINLL--TNCSKLERLYFNRNGFEG--VLPHS-IANLSSTIKQIAMGSNRISSTIP-HGIRNLVN 233 (746)
Q Consensus 160 Ls~N~l~~~~~~~~~~~~~~--~~l~~L~~L~Ls~N~l~~--~~p~~-~~~l~~~L~~L~l~~N~i~~~~p-~~~~~l~~ 233 (746)
|++|++.+. ...+..+ ..+++|++|+|++|++++ .++.. +..++ +|+.|++++|++++..| ..+..+++
T Consensus 180 Ls~N~l~~~----~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~l~~ 254 (312)
T 1wwl_A 180 LSDNPELGE----RGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARV-QLQGLDLSHNSLRDAAGAPSCDWPSQ 254 (312)
T ss_dssp CCSCTTCHH----HHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTC-CCSEEECTTSCCCSSCCCSCCCCCTT
T ss_pred CCCCCcCcc----hHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCC-CCCEEECCCCcCCcccchhhhhhcCC
Confidence 555554320 0012222 445555555555555541 11111 12222 34444444444444332 22333444
Q ss_pred CCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 234 LNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 234 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
|++|+|++|+++ .+|..+. ++|++|+|++|+|+
T Consensus 255 L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~ 287 (312)
T 1wwl_A 255 LNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLD 287 (312)
T ss_dssp CCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCC
T ss_pred CCEEECCCCccC-hhhhhcc--CCceEEECCCCCCC
Confidence 444444444443 3333333 34444444444433
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=266.66 Aligned_cols=238 Identities=21% Similarity=0.165 Sum_probs=149.6
Q ss_pred cCchhhhCCc----cCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccC
Q 041467 33 EIPHQIGRLI----SLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGH 108 (746)
Q Consensus 33 ~~p~~~~~l~----~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 108 (746)
.+|..+..+. +|++|+|++|.|++..|..|+.+++|++|+|++|.+.+..| ++.
T Consensus 21 ~l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~----------------------l~~ 78 (487)
T 3oja_A 21 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD----------------------LES 78 (487)
T ss_dssp THHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE----------------------CTT
T ss_pred hhHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc----------------------ccc
Confidence 3455555554 78899999999888777888888889999998888754332 344
Q ss_pred CCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEE
Q 041467 109 LKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188 (746)
Q Consensus 109 l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L 188 (746)
+++|+.|+|++|.+..+...++|+.|+|++|.|++..+. .+++|+.|+|++|.+++ ..|..++.+++|+.|
T Consensus 79 l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~------~~~~~~~~l~~L~~L 149 (487)
T 3oja_A 79 LSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITM------LRDLDEGCRSRVQYL 149 (487)
T ss_dssp CTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCS------GGGBCGGGGSSEEEE
T ss_pred CCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCC------CCchhhcCCCCCCEE
Confidence 566666667777776666667777777777777765443 34567777777777665 334455566666666
Q ss_pred EcccccccccCChhhh-hcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccc
Q 041467 189 YFNRNGFEGVLPHSIA-NLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNH 267 (746)
Q Consensus 189 ~Ls~N~l~~~~p~~~~-~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 267 (746)
+|++|.+++..|..+. .++ +|+.|+|++|.|++. | .+..+++|+.|+|++|++++..| .+..+++|+.|+|++|.
T Consensus 150 ~Ls~N~l~~~~~~~l~~~l~-~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~ 225 (487)
T 3oja_A 150 DLKLNEIDTVNFAELAASSD-TLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNK 225 (487)
T ss_dssp ECTTSCCCEEEGGGGGGGTT-TCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSC
T ss_pred ECCCCCCCCcChHHHhhhCC-cccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCc
Confidence 6666666665665554 344 566666666666653 2 12345666666666666654333 35566666666666665
Q ss_pred ccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCc-cccchhhhhcccc
Q 041467 268 LQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT-STLPQQILSVTTL 327 (746)
Q Consensus 268 l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~l 327 (746)
++ .+|..+..+++|+.|++++|.+. +.+|..+..+..+
T Consensus 226 l~----------------------~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L 264 (487)
T 3oja_A 226 LV----------------------LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV 264 (487)
T ss_dssp CC----------------------EECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHH
T ss_pred Cc----------------------ccchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCC
Confidence 55 23334455556666666666665 4455555555544
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-28 Score=270.00 Aligned_cols=175 Identities=17% Similarity=0.176 Sum_probs=125.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCC-Cceee------------
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRH-RNLIK------------ 532 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~H-pnIv~------------ 532 (746)
....|...+.||+|+||.||+ ||||++.... ....+.+.+|+.+++.++| +|+..
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 344577788999999999997 9999886332 2336779999999999987 32111
Q ss_pred ---------EEEEEecC-----CcccchhhhccCCccc------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 041467 533 ---------IITICSSI-----DFEGFDFKAISNGQLR------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586 (746)
Q Consensus 533 ---------l~~~~~~~-----~~~~lv~e~~~~g~l~------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ 586 (746)
+..++... ...+++|+++ .|++. ...+++..+..++.|+++||+|||++ +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 11111111 1223444433 44443 23467889999999999999999999 9
Q ss_pred eEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccccccccccccccccccccccccc-------ccccCCCccc
Q 041467 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR-------NLENREKRHT 659 (746)
Q Consensus 587 ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-------~~~~~~~~~D 659 (746)
|+||||||+|||++.++.+||+|||+|+.... .....+| +.|||||++.+. ....++.++|
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~-----------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~D 299 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----------SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFD 299 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTE-----------EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCC-----------ccccCCC-CceeCchhhhccccccccccCcCCCchhh
Confidence 99999999999999999999999999986421 1334678 999999999422 1112244699
Q ss_pred eeeccceee
Q 041467 660 VMSFPQRFA 668 (746)
Q Consensus 660 iwSlG~i~~ 668 (746)
||||||++|
T Consensus 300 vwSlGvil~ 308 (413)
T 3dzo_A 300 TWTLGLAIY 308 (413)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999998
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-27 Score=252.33 Aligned_cols=240 Identities=19% Similarity=0.215 Sum_probs=191.4
Q ss_pred cccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchh
Q 041467 6 LLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTE 85 (746)
Q Consensus 6 ~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 85 (746)
+...+...+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..| |..+++|++|+|++|.+.+.
T Consensus 22 l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l---- 95 (317)
T 3o53_A 22 LKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL---- 95 (317)
T ss_dssp HHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE----
T ss_pred hhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc----
Confidence 333344444556789999999999998888999999999999999999987554 99999999999999987432
Q ss_pred hcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcccc--cCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCC
Q 041467 86 ICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSL--SNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVN 163 (746)
Q Consensus 86 ~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l--~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 163 (746)
...++|+.|++++|++..+ ..+++|+.|++++|++++..+..|+.+++|++|+|++|
T Consensus 96 ---------------------~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 154 (317)
T 3o53_A 96 ---------------------LVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLN 154 (317)
T ss_dssp ---------------------EECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTS
T ss_pred ---------------------cCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCC
Confidence 1235677777888887543 35788999999999999888888999999999999999
Q ss_pred CCCCCCCCCccccccc-cCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccc
Q 041467 164 NLGSGTANELDFINLL-TNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS 242 (746)
Q Consensus 164 ~l~~~~~~~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N 242 (746)
.+++ ..+..+ ..+++|++|+|++|.+++. |.. ..++ +|+.|++++|++++ +|..|..+++|++|+|++|
T Consensus 155 ~l~~------~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~-~~l~-~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N 224 (317)
T 3o53_A 155 EIDT------VNFAELAASSDTLEHLNLQYNFIYDV-KGQ-VVFA-KLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNN 224 (317)
T ss_dssp CCCE------EEGGGGGGGTTTCCEEECTTSCCCEE-ECC-CCCT-TCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTS
T ss_pred CCCc------ccHHHHhhccCcCCEEECCCCcCccc-ccc-cccc-cCCEEECCCCcCCc-chhhhcccCcccEEECcCC
Confidence 9986 233334 4788999999999999855 332 2355 79999999999996 5666899999999999999
Q ss_pred cceecCCcCCCCCCCCceeeccccccc-ccccccccccChHH
Q 041467 243 QLIGTIPPLIGETPNLQLLNIGGNHLQ-GSILSSLGNLTLQT 283 (746)
Q Consensus 243 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~l~~l~~l~ 283 (746)
++. .+|..+..+++|+.|+|++|.+. +.++..+..+..+.
T Consensus 225 ~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~ 265 (317)
T 3o53_A 225 KLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQ 265 (317)
T ss_dssp CCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHH
T ss_pred ccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccce
Confidence 998 46888999999999999999998 55555554444333
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.3e-26 Score=257.96 Aligned_cols=261 Identities=24% Similarity=0.228 Sum_probs=215.9
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 82 (746)
+|++.++|.... ++|++|+|++|.|+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|++|.+.+ +
T Consensus 49 ~n~L~~lp~~l~---~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l 116 (622)
T 3g06_A 49 ESGLTTLPDCLP---AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-L 116 (622)
T ss_dssp SSCCSCCCSCCC---TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-C
T ss_pred CCCcCccChhhC---CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-C
Confidence 455665554333 78999999999998 5776 57999999999999984 676 67999999999999965 4
Q ss_pred chhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCccccc-CCCCCcEeeCccCcccccCCccccCCCCCCEEEcc
Q 041467 83 LTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLS-NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLG 161 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 161 (746)
|. .+++|+.|++++|.....-..+++|+.|+|++|++..++ .+++|+.|++++|+|++. | ..+++|+.|+|+
T Consensus 117 ~~---~l~~L~~L~L~~N~l~~lp~~l~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l-~---~~~~~L~~L~Ls 189 (622)
T 3g06_A 117 PA---LPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSL-P---MLPSGLQELSVS 189 (622)
T ss_dssp CC---CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCC-C---CCCTTCCEEECC
T ss_pred CC---CCCCcCEEECCCCCCCcCCCCCCCCCEEECcCCcCCCcCCccCCCCEEECCCCCCCCC-c---ccCCCCcEEECC
Confidence 44 678999999998765543445699999999999998775 467999999999999964 4 457999999999
Q ss_pred CCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccc
Q 041467 162 VNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMES 241 (746)
Q Consensus 162 ~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~ 241 (746)
+|.+++.+ . .+++|+.|++++|.++ .+|.. + ++|+.|++++|+|++ +| ..+++|+.|+|++
T Consensus 190 ~N~l~~l~-------~---~~~~L~~L~L~~N~l~-~l~~~---~-~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~ 250 (622)
T 3g06_A 190 DNQLASLP-------T---LPSELYKLWAYNNRLT-SLPAL---P-SGLKELIVSGNRLTS-LP---VLPSELKELMVSG 250 (622)
T ss_dssp SSCCSCCC-------C---CCTTCCEEECCSSCCS-SCCCC---C-TTCCEEECCSSCCSC-CC---CCCTTCCEEECCS
T ss_pred CCCCCCCC-------C---ccchhhEEECcCCccc-ccCCC---C-CCCCEEEccCCccCc-CC---CCCCcCcEEECCC
Confidence 99998632 2 2478999999999998 56643 2 379999999999996 66 4568999999999
Q ss_pred ccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhh
Q 041467 242 SQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQI 321 (746)
Q Consensus 242 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 321 (746)
|+++ .+|. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|++|.+++..|..+
T Consensus 251 N~L~-~lp~---~~~~L~~L~Ls~N~L~----------------------~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l 304 (622)
T 3g06_A 251 NRLT-SLPM---LPSGLLSLSVYRNQLT----------------------RLPESLIHLSSETTVNLEGNPLSERTLQAL 304 (622)
T ss_dssp SCCS-CCCC---CCTTCCEEECCSSCCC----------------------SCCGGGGGSCTTCEEECCSCCCCHHHHHHH
T ss_pred CCCC-cCCc---ccccCcEEeCCCCCCC----------------------cCCHHHhhccccCEEEecCCCCCCcCHHHH
Confidence 9998 4665 5789999999999887 567788899999999999999999999888
Q ss_pred hhcccc
Q 041467 322 LSVTTL 327 (746)
Q Consensus 322 ~~l~~l 327 (746)
..+...
T Consensus 305 ~~L~~~ 310 (622)
T 3g06_A 305 REITSA 310 (622)
T ss_dssp HHHHHS
T ss_pred Hhcccc
Confidence 777643
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-26 Score=253.47 Aligned_cols=219 Identities=18% Similarity=0.141 Sum_probs=199.5
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|.+.+..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 67999999999999888999999999999999999999888899999999999999999998777778999999999999
Q ss_pred cCCCCc----CcccCCCCCCEEeccCC-Ccc-----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCC
Q 041467 98 DCGGRI----DSLGHLKSLLLLSLAFN-QFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167 (746)
Q Consensus 98 ~~~~~~----~~~~~l~~L~~L~Ls~N-~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (746)
++|... ..|.++++|+.|+|++| .+. .|.++++|+.|+|++|++++. | .+..+++|++|+|++|.+++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 987644 46889999999999994 443 467899999999999999965 3 58899999999999999987
Q ss_pred CCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccce
Q 041467 168 GTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLI 245 (746)
Q Consensus 168 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~ 245 (746)
..+..|.++++|+.|+|++|++++..|..|..++ +|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 233 ------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 233 ------IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLA-SLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp ------ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCT-TCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred ------cCcccccCccCCCEEEeCCCcCceECHHHhcCCC-CCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 4567899999999999999999998899999987 7999999999999877888999999999999999876
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.5e-26 Score=250.64 Aligned_cols=229 Identities=19% Similarity=0.168 Sum_probs=202.8
Q ss_pred CcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccch
Q 041467 5 NLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILT 84 (746)
Q Consensus 5 ~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 84 (746)
++..+|... .+.+++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++....+.
T Consensus 54 ~l~~iP~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 130 (440)
T 3zyj_A 54 NLREVPDGI---STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNG 130 (440)
T ss_dssp CCSSCCSCC---CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTT
T ss_pred CcCcCCCCC---CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHh
Confidence 444555433 26799999999999988889999999999999999999988889999999999999999999877777
Q ss_pred hhcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCC-cc-----cccCCCCCcEeeCccCcccccCCccccCCCC
Q 041467 85 EICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQ-FL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKN 154 (746)
Q Consensus 85 ~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~-l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 154 (746)
.|..+++|++|++++|... ..|.++++|+.|+|++|+ +. .|.++++|+.|+|++|+++.. | .+..+++
T Consensus 131 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~ 208 (440)
T 3zyj_A 131 AFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P-NLTPLIK 208 (440)
T ss_dssp TSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-C-CCTTCSS
T ss_pred HhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-c-ccCCCcc
Confidence 8999999999999987643 468899999999999954 42 467899999999999999954 4 4889999
Q ss_pred CCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCC
Q 041467 155 LSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNL 234 (746)
Q Consensus 155 L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L 234 (746)
|++|+|++|.+++ ..+..|.++++|+.|+|++|++++..|..|..++ +|+.|+|++|+|++..+..|..+++|
T Consensus 209 L~~L~Ls~N~l~~------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 209 LDELDLSGNHLSA------IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ-SLVEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp CCEEECTTSCCCE------ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT-TCCEEECTTSCCCCCCTTTTSSCTTC
T ss_pred cCEEECCCCccCc------cChhhhccCccCCEEECCCCceeEEChhhhcCCC-CCCEEECCCCCCCccChhHhccccCC
Confidence 9999999999987 3456789999999999999999998899999987 79999999999998888889999999
Q ss_pred Ceeecccccce
Q 041467 235 NWLTMESSQLI 245 (746)
Q Consensus 235 ~~L~L~~N~l~ 245 (746)
+.|+|++|.+.
T Consensus 282 ~~L~L~~Np~~ 292 (440)
T 3zyj_A 282 ERIHLHHNPWN 292 (440)
T ss_dssp CEEECCSSCEE
T ss_pred CEEEcCCCCcc
Confidence 99999999986
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-27 Score=249.03 Aligned_cols=226 Identities=19% Similarity=0.246 Sum_probs=184.7
Q ss_pred ccEEecccCcC-cccCchhhh-------CCccCcEEecccCcCCccCCccc--cCCCCCCeeeCcCCCCCCccchhhcCC
Q 041467 20 LRYINLVNNGF-NGEIPHQIG-------RLISLERLILSNNSFSCAIPANL--SSGSNLIKLSTDSNNLVRDILTEICSL 89 (746)
Q Consensus 20 L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l 89 (746)
|++|+|++|.+ ...+|..+. ++++|++|+|++|++++.+|..+ ..+++|++|+|++|.+.+. |..+..+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 89999999999 457888776 89999999999999999999987 8999999999999999776 6665543
Q ss_pred CCCCEEEccCCCCcCcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCccccc--CCccc--cCCCCCCEEEc
Q 041467 90 FKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGG--VSVDF--SRLKNLSWLNL 160 (746)
Q Consensus 90 ~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~--~~~~~--~~l~~L~~L~L 160 (746)
.. ..+++|++|+|++|++. .+.++++|+.|+|++|++.+. .+..+ ..+++|++|+|
T Consensus 144 ~~---------------~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L 208 (312)
T 1wwl_A 144 QQ---------------WLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLAL 208 (312)
T ss_dssp HT---------------TCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEEC
T ss_pred HH---------------hhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEEC
Confidence 10 01256777777777773 456789999999999998765 23344 89999999999
Q ss_pred cCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCC-hhhhhcccccceEEcccCcccccCCccccCCCCCCeeec
Q 041467 161 GVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLP-HSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTM 239 (746)
Q Consensus 161 s~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L 239 (746)
++|.+++.+. .....+.++++|++|+|++|++++..| ..+..+. +|+.|++++|+|+ .+|..+. ++|++|+|
T Consensus 209 ~~N~l~~~~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~-~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~L 281 (312)
T 1wwl_A 209 RNAGMETPSG---VCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS-QLNSLNLSFTGLK-QVPKGLP--AKLSVLDL 281 (312)
T ss_dssp TTSCCCCHHH---HHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT-TCCEEECTTSCCS-SCCSSCC--SEEEEEEC
T ss_pred CCCcCcchHH---HHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC-CCCEEECCCCccC-hhhhhcc--CCceEEEC
Confidence 9999974210 112345688999999999999998775 3444555 7999999999999 6888777 89999999
Q ss_pred ccccceecCCcCCCCCCCCceeecccccccc
Q 041467 240 ESSQLIGTIPPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 240 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
++|++++. |. +..+++|++|+|++|.+++
T Consensus 282 s~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 282 SYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 99999876 66 9999999999999999985
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=238.61 Aligned_cols=234 Identities=18% Similarity=0.148 Sum_probs=182.0
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCC-CCCccchhhcCCCCCCEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN-LVRDILTEICSLFKLERL 95 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L 95 (746)
.++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|++++|. +....|..+..+++
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~---- 106 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGR---- 106 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTT----
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcC----
Confidence 4689999999999998777899999999999999999998889999999999999999997 65444555555544
Q ss_pred EccCCCCcCcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCC
Q 041467 96 RIDCGGRIDSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTA 170 (746)
Q Consensus 96 ~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 170 (746)
|+.|++++|++. .+.++++|++|++++|++++..+..|+.+++|++|+|++|.+++.
T Consensus 107 ----------------L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-- 168 (285)
T 1ozn_A 107 ----------------LHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV-- 168 (285)
T ss_dssp ----------------CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE--
T ss_pred ----------------CCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccccc--
Confidence 555555555552 245678888888888888877777788899999999999988752
Q ss_pred CCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCc
Q 041467 171 NELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP 250 (746)
Q Consensus 171 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 250 (746)
.+..+..+++|+.|++++|.+++..|..+..++ +|+.|++++|++++..+..|..+++|++|++++|.+....+.
T Consensus 169 ----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 169 ----PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG-RLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp ----CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred ----CHHHhcCccccCEEECCCCcccccCHhHccCcc-cccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc
Confidence 223577888999999999999888888888887 799999999999876667788999999999999988753322
Q ss_pred CCCCCCCCceeecccccccccccccccc
Q 041467 251 LIGETPNLQLLNIGGNHLQGSILSSLGN 278 (746)
Q Consensus 251 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~ 278 (746)
. .-...++.+..+.|.+....|..+..
T Consensus 244 ~-~~~~~l~~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 244 R-PLWAWLQKFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp H-HHHHHHHHCCSEECCCBEEESGGGTT
T ss_pred H-HHHHHHHhcccccCccccCCchHhCC
Confidence 1 11123455556666666666655544
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-27 Score=245.36 Aligned_cols=148 Identities=9% Similarity=0.009 Sum_probs=128.5
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 6799999999999999997 8999987542 334577999999999999999999999999999999999
Q ss_pred hhccCCccc---ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 548 KAISNGQLR---LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 548 e~~~~g~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
||+++++|. .......++..++.|++.||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------------
T ss_pred EecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------------
Confidence 999999886 33456678899999999999999999 99999999999999999999998432
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|++| + +.++|||||||++|
T Consensus 175 ---------------~~~~-------~---~~~~Di~slG~il~ 193 (286)
T 3uqc_A 175 ---------------TMPD-------A---NPQDDIRGIGASLY 193 (286)
T ss_dssp ---------------CCTT-------C---CHHHHHHHHHHHHH
T ss_pred ---------------ccCC-------C---CchhHHHHHHHHHH
Confidence 3433 2 34599999999998
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=258.96 Aligned_cols=215 Identities=19% Similarity=0.239 Sum_probs=185.0
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
.++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| |+.+++|++|+|++|.+.+..
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-------------- 96 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-------------- 96 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE--------------
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC--------------
Confidence 4589999999999998888999999999999999999997665 999999999999999874321
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcccc--cCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFLSL--SNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l--~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
..++|+.|+|++|.+..+ ..+++|+.|+|++|+|++..|..|+.+++|++|+|++|.+++ .
T Consensus 97 -----------~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~------~ 159 (487)
T 3oja_A 97 -----------VGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT------V 159 (487)
T ss_dssp -----------ECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCE------E
T ss_pred -----------CCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCC------c
Confidence 125677788888888543 357899999999999999999999999999999999999987 3
Q ss_pred cccccc-CCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCC
Q 041467 175 FINLLT-NCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIG 253 (746)
Q Consensus 175 ~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 253 (746)
.|..+. .+++|+.|+|++|.+++..+ +..++ +|+.|+|++|+|++ +|..|..+++|+.|+|++|.+.+ +|..++
T Consensus 160 ~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~-~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~ 234 (487)
T 3oja_A 160 NFAELAASSDTLEHLNLQYNFIYDVKG--QVVFA-KLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALR 234 (487)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCT-TCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCC
T ss_pred ChHHHhhhCCcccEEecCCCccccccc--cccCC-CCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhc
Confidence 455554 78999999999999987633 23455 79999999999997 55569999999999999999986 788899
Q ss_pred CCCCCceeeccccccc
Q 041467 254 ETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 254 ~l~~L~~L~Ls~N~l~ 269 (746)
.+++|+.|++++|.+.
T Consensus 235 ~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 235 FSQNLEHFDLRGNGFH 250 (487)
T ss_dssp CCTTCCEEECTTCCBC
T ss_pred cCCCCCEEEcCCCCCc
Confidence 9999999999999987
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-27 Score=247.14 Aligned_cols=150 Identities=18% Similarity=0.252 Sum_probs=126.5
Q ss_pred hhcCCCCC-CeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHh-hcCCCCceeeEEEEEec----CCc
Q 041467 478 ATNNFSPA-NKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNAL-RNIRHRNLIKIITICSS----IDF 542 (746)
Q Consensus 478 ~~~~~~~~-~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l-~~l~HpnIv~l~~~~~~----~~~ 542 (746)
..++|... +.||+|+||.||+ ||||++.. ...+.+|++++ +..+||||+++++++.. ...
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 34567666 7899999999996 89999852 34577899887 66689999999999877 667
Q ss_pred ccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEccccc
Q 041467 543 EGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGDLGL 612 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DfGl 612 (746)
.++||||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 89999999999985 23589999999999999999999999 9999999999999997 78999999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+... +..+ +.++||||+||++|
T Consensus 167 a~~~~------------------------------~~~~---~~~~DiwslG~il~ 189 (299)
T 3m2w_A 167 AKETT------------------------------GEKY---DKSCDMWSLGVIMY 189 (299)
T ss_dssp CEECT------------------------------TCGG---GGHHHHHHHHHHHH
T ss_pred ccccc------------------------------cccC---CchhhHHHHHHHHH
Confidence 87531 0123 33599999999998
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=225.17 Aligned_cols=220 Identities=20% Similarity=0.182 Sum_probs=162.2
Q ss_pred EEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCC
Q 041467 22 YINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGG 101 (746)
Q Consensus 22 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~ 101 (746)
..+.++..+. .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+.+..+..+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~--------------- 72 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAY--------------- 72 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTT---------------
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHc---------------
Confidence 4555555554 4555443 356677777777665555566666777777776666644333333
Q ss_pred CcCcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccc
Q 041467 102 RIDSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176 (746)
Q Consensus 102 ~~~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 176 (746)
.++++|+.|+|++|++. .+.++++|++|++++|++++..+..|+.+++|++|+|++|.+++. .+|
T Consensus 73 -----~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-----~l~ 142 (276)
T 2z62_A 73 -----QSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF-----KLP 142 (276)
T ss_dssp -----TTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC-----CCC
T ss_pred -----cCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee-----cCc
Confidence 33344444444444442 345677888888888888887777899999999999999998762 256
Q ss_pred ccccCCCCCCEEEcccccccccCChhhhhcccccc----eEEcccCcccccCCccccCCCCCCeeecccccceecCCcCC
Q 041467 177 NLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIK----QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLI 252 (746)
Q Consensus 177 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~----~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 252 (746)
..+.++++|+.|++++|++++..+..+..+. .|+ .|++++|++++..+..+. ..+|++|+|++|++++..+..|
T Consensus 143 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~ 220 (276)
T 2z62_A 143 EYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH-QMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIF 220 (276)
T ss_dssp GGGGGCTTCCEEECCSSCCCEECGGGGHHHH-TCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTT
T ss_pred hhhccCCCCCEEECCCCCCCcCCHHHhhhhh-hccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHh
Confidence 7788999999999999999988778888876 577 899999999976555554 4589999999999998777778
Q ss_pred CCCCCCceeeccccccccc
Q 041467 253 GETPNLQLLNIGGNHLQGS 271 (746)
Q Consensus 253 ~~l~~L~~L~Ls~N~l~~~ 271 (746)
..+++|+.|+|++|.+.+.
T Consensus 221 ~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 221 DRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp TTCCSCCEEECCSSCBCCC
T ss_pred cccccccEEEccCCccccc
Confidence 9999999999999999854
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=221.81 Aligned_cols=218 Identities=18% Similarity=0.206 Sum_probs=171.3
Q ss_pred CCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 4 n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
+..+.|....|.....++++++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+....+
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 4567777777876677899999999998 6787664 689999999999997777789999999999999998854332
Q ss_pred hhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCC
Q 041467 84 TEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVN 163 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 163 (746)
.. |.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 79 ~~---------------------------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 119 (270)
T 2o6q_A 79 GI---------------------------------------FKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRN 119 (270)
T ss_dssp TT---------------------------------------TSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSS
T ss_pred hh---------------------------------------hcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCC
Confidence 22 223455566666666777666667778888888888888
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccccc
Q 041467 164 NLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQ 243 (746)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~ 243 (746)
.++..+ +..|..+++|++|+|++|.+++..+..|..++ +|+.|++++|++++..+..|.++++|++|+|++|+
T Consensus 120 ~l~~~~------~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (270)
T 2o6q_A 120 QLKSLP------PRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT-SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQ 192 (270)
T ss_dssp CCCCCC------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCeeC------HHHhCcCcCCCEEECCCCcCCccCHhHccCCc-ccceeEecCCcCcEeChhHhccCCCcCEEECCCCc
Confidence 887632 34467788888888888888765555577776 68888888888887767778889999999999999
Q ss_pred ceecCCcCCCCCCCCceeecccccccc
Q 041467 244 LIGTIPPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 244 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
+.+..+..|..+++|+.|+|++|.+..
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 193 LKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCcCCHHHhccccCCCEEEecCCCeeC
Confidence 987777778889999999999998864
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-24 Score=221.08 Aligned_cols=221 Identities=20% Similarity=0.163 Sum_probs=147.7
Q ss_pred cEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcc-
Q 041467 45 ERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL- 123 (746)
Q Consensus 45 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~- 123 (746)
...+.++..++ .+|..+. ++|++|++++|.+.+..+..+ .++++|++|+|++|++.
T Consensus 10 ~~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~--------------------~~l~~L~~L~l~~n~l~~ 66 (276)
T 2z62_A 10 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSF--------------------FSFPELQVLDLSRCEIQT 66 (276)
T ss_dssp TEEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTT--------------------TTCTTCSEEECTTCCCCE
T ss_pred ceEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHh--------------------ccccCCcEEECCCCcCCc
Confidence 35677777777 5787765 589999999999866544444 44455555556666552
Q ss_pred ----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEccccccccc-
Q 041467 124 ----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGV- 198 (746)
Q Consensus 124 ----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~- 198 (746)
.|.++++|++|+|++|++++..+..|.++++|++|++++|.+++.. +..+..+++|++|++++|.+++.
T Consensus 67 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------~~~~~~l~~L~~L~l~~n~l~~~~ 140 (276)
T 2z62_A 67 IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE------NFPIGHLKTLKELNVAHNLIQSFK 140 (276)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCST------TCCCTTCTTCCEEECCSSCCCCCC
T ss_pred cCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccC------chhcccCCCCCEEECcCCccceec
Confidence 3556778888888888887777777778888888888888776532 22366777788888887777653
Q ss_pred CChhhhhcccccceEEcccCcccccCCccccCCCCCC----eeecccccceecCCcCCCCCCCCceeecccccccccccc
Q 041467 199 LPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLN----WLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILS 274 (746)
Q Consensus 199 ~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 274 (746)
+|..+..++ +|+.|++++|++++..+..|..+.+|+ .|++++|.+.+..+..+. ..+|+.|+|++|++++
T Consensus 141 l~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~---- 214 (276)
T 2z62_A 141 LPEYFSNLT-NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKS---- 214 (276)
T ss_dssp CCGGGGGCT-TCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSC----
T ss_pred CchhhccCC-CCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceee----
Confidence 577777776 677777777777766666666655555 667777777655444443 3367777777666652
Q ss_pred cccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCcccc
Q 041467 275 SLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTL 317 (746)
Q Consensus 275 ~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 317 (746)
..+..|..+++|+.|+|++|.+++..
T Consensus 215 -----------------~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 215 -----------------VPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp -----------------CCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred -----------------cCHhHhcccccccEEEccCCcccccC
Confidence 22233456666777777777766543
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-24 Score=222.24 Aligned_cols=201 Identities=18% Similarity=0.190 Sum_probs=145.1
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
..+..+++..+.+.... .+..+++|+.|++++|.++. + ..+..+++|++|++++|.+.+.
T Consensus 19 ~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~---------------- 78 (272)
T 3rfs_A 19 AETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI---------------- 78 (272)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC----------------
T ss_pred HHHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc----------------
Confidence 34555666666665332 34566777777777777763 3 2466677777777777765331
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFIN 177 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 177 (746)
..+.++++|++|+|++|++++..+..|..+++|++|+|++|.+++. .+.
T Consensus 79 -------------------------~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~------~~~ 127 (272)
T 3rfs_A 79 -------------------------SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSL------PDG 127 (272)
T ss_dssp -------------------------GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCC------CTT
T ss_pred -------------------------hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCcc------CHH
Confidence 1234556677777777777777777778888888888888888763 234
Q ss_pred cccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCC
Q 041467 178 LLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257 (746)
Q Consensus 178 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 257 (746)
.|..+++|++|++++|++++..|..+..++ +|+.|++++|++++..+..|+.+++|++|++++|++.+..|..+..+++
T Consensus 128 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 206 (272)
T 3rfs_A 128 VFDKLTNLTYLNLAHNQLQSLPKGVFDKLT-NLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 206 (272)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred HhccCCCCCEEECCCCccCccCHHHhccCc-cCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcC
Confidence 467788888888888888866666667776 6888888888888777777888888888888888888877777888888
Q ss_pred Cceeecccccccc
Q 041467 258 LQLLNIGGNHLQG 270 (746)
Q Consensus 258 L~~L~Ls~N~l~~ 270 (746)
|+.|+|++|.+.+
T Consensus 207 L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 207 LQYIWLHDNPWDC 219 (272)
T ss_dssp CCEEECCSSCBCC
T ss_pred CCEEEccCCCccc
Confidence 8888888887764
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=216.32 Aligned_cols=210 Identities=20% Similarity=0.217 Sum_probs=165.0
Q ss_pred cccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 15 ILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
..+++|+.|++++|.++ .++ .+..+++|++|+|++|.+++ + ..+..+++|++|+|++|.+.+..+..+
T Consensus 38 ~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~-------- 105 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVF-------- 105 (272)
T ss_dssp HHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTT--------
T ss_pred ccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHh--------
Confidence 34788999999999997 444 58999999999999999986 3 489999999999999998865544333
Q ss_pred EEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 95 LRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 95 L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
.++++|++|+|++|++++..+..|+.+++|++|+|++|.+++.+
T Consensus 106 -------------------------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~----- 149 (272)
T 3rfs_A 106 -------------------------------DKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLP----- 149 (272)
T ss_dssp -------------------------------TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC-----
T ss_pred -------------------------------cCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccC-----
Confidence 34455666667777777777777888888888888888887632
Q ss_pred ccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCC
Q 041467 175 FINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE 254 (746)
Q Consensus 175 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 254 (746)
+..+..+++|+.|++++|++++..|..+..++ +|+.|++++|++++..|..|+.+++|++|++++|.+.+ .
T Consensus 150 -~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~ 220 (272)
T 3rfs_A 150 -KGVFDKLTNLTELDLSYNQLQSLPEGVFDKLT-QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------T 220 (272)
T ss_dssp -TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------C
T ss_pred -HHHhccCccCCEEECCCCCcCccCHHHhcCCc-cCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------c
Confidence 34467788888888888888876666677776 68888888888888777778888999999999887764 3
Q ss_pred CCCCceeecccccccccccccccccCh
Q 041467 255 TPNLQLLNIGGNHLQGSILSSLGNLTL 281 (746)
Q Consensus 255 l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 281 (746)
+++|+.|+++.|.++|.+|.+++.+..
T Consensus 221 ~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 221 CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 557888888888888888877766543
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.4e-26 Score=259.40 Aligned_cols=380 Identities=16% Similarity=0.101 Sum_probs=249.3
Q ss_pred cccccccccEEecccCcC---cccCchhhh------------CCccCcEEecccCcCCccCCccccCC--CCCCeeeCcC
Q 041467 13 LCILRTFLRYINLVNNGF---NGEIPHQIG------------RLISLERLILSNNSFSCAIPANLSSG--SNLIKLSTDS 75 (746)
Q Consensus 13 ~~~~~~~L~~L~Ls~N~l---~~~~p~~~~------------~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~~ 75 (746)
.+..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..++.. .+|++|+|++
T Consensus 68 ~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~ 147 (592)
T 3ogk_B 68 LSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDK 147 (592)
T ss_dssp HHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEES
T ss_pred HHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcC
Confidence 344578899999987532 123333332 78899999999998887666666663 4599999988
Q ss_pred CCCCC--ccchhhcCCCCCCEEEccCCCCc--------CcccCCCCCCEEeccCCCcc-----c----ccCCCCCcEeeC
Q 041467 76 NNLVR--DILTEICSLFKLERLRIDCGGRI--------DSLGHLKSLLLLSLAFNQFL-----S----LSNASSLEMIEF 136 (746)
Q Consensus 76 N~l~~--~~~~~~~~l~~L~~L~l~~~~~~--------~~~~~l~~L~~L~Ls~N~l~-----~----l~~l~~L~~L~L 136 (746)
|.-.. .++.....+++|++|+|+.+... ..+.++++|+.|++++|.+. . +.++++|+.|++
T Consensus 148 ~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L 227 (592)
T 3ogk_B 148 CSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKV 227 (592)
T ss_dssp CEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEEC
T ss_pred CCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEec
Confidence 86211 12333457889999999876532 23457889999999999885 1 246789999999
Q ss_pred ccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcc
Q 041467 137 SRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMG 216 (746)
Q Consensus 137 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~ 216 (746)
++|.+.+ ++..+..+++|+.|+++.+...... ...+..+..+++|+.|+++++.. +.+|..+..++ +|++|+++
T Consensus 228 ~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~---~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~-~L~~L~Ls 301 (592)
T 3ogk_B 228 GDFEILE-LVGFFKAAANLEEFCGGSLNEDIGM---PEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAA-QIRKLDLL 301 (592)
T ss_dssp SSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTC---TTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGG-GCCEEEET
T ss_pred cCccHHH-HHHHHhhhhHHHhhcccccccccch---HHHHHHhhccccccccCccccch-hHHHHHHhhcC-CCcEEecC
Confidence 9999886 5677888999999999863322100 12334566778888888877643 35666666665 68888888
Q ss_pred cCcccccCC-ccccCCCCCCeeecccccceecCCcCCCCCCCCceeecc-----------cccccccc----cccccccC
Q 041467 217 SNRISSTIP-HGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIG-----------GNHLQGSI----LSSLGNLT 280 (746)
Q Consensus 217 ~N~i~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls-----------~N~l~~~~----~~~l~~l~ 280 (746)
+|.+++... ..+..+++|+.|+++++-..+.++..+..+++|++|+|+ .|.+++.. ...+.+|+
T Consensus 302 ~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 381 (592)
T 3ogk_B 302 YALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELE 381 (592)
T ss_dssp TCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCS
T ss_pred CCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCe
Confidence 888764333 335778888888887333233344444567778888888 35665432 22345666
Q ss_pred hHHhhhccCCCCCCccccC-CCCCCeeeec----CCcCccc-----cchhhhhcccccceEEccCc--cccccCchhhhc
Q 041467 281 LQTYLFNNLQGNIPSSLAN-CKSLLGLSVS----HNKLTST-----LPQQILSVTTLSLYLELDNN--LLNGSLPPEVGN 348 (746)
Q Consensus 281 ~l~~l~n~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~l~~~L~Ls~N--~l~~~~p~~~~~ 348 (746)
.|.+..|++++..+..++. +++|+.|+++ .|++++. ++..+..+++| +.|+++++ .+++..+..++.
T Consensus 382 ~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L-~~L~L~~~~~~l~~~~~~~~~~ 460 (592)
T 3ogk_B 382 YMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKL-RRFAFYLRQGGLTDLGLSYIGQ 460 (592)
T ss_dssp EEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTC-CEEEEECCGGGCCHHHHHHHHH
T ss_pred EEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCC-CEEEEecCCCCccHHHHHHHHH
Confidence 6666566676665556655 7778888885 6677642 44445667777 56777643 356555555543
Q ss_pred -ccCCceeecCC----------CCCCCCCCCEEEccCCcCcccC-CC-CCccCCCCeeeEecCC
Q 041467 349 -LKNLLRLHIPE----------YPENLSFFELLNLSYNYFGSEV-PT-KGVFNNKTRFSIIGNG 399 (746)
Q Consensus 349 -l~~L~~L~lp~----------~~~~l~~L~~L~ls~N~l~~~~-p~-~~~~~~~~~~~~~~n~ 399 (746)
+++|+.|++.. ....+++|+.|++++|.+++.. +. ...+.++..+++.+|.
T Consensus 461 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 461 YSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp SCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred hCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 67777776533 2245678888888888876542 21 1235667777777775
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-25 Score=237.15 Aligned_cols=269 Identities=14% Similarity=0.177 Sum_probs=181.6
Q ss_pred EEecccCcCcccCchhhhCCccCcEEecccCcCCccCC----ccccCCC-CCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 22 YINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIP----ANLSSGS-NLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 22 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
+++|++|.+++.+|..+...++|++|||++|.|++..+ ..|..++ +|++|+|++|.+.+..+..+..+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~------- 74 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQI------- 74 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHH-------
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHH-------
Confidence 57888999988888887777779999999999886655 6777888 89999999998876666555432
Q ss_pred ccCCCCcCcccCC-CCCCEEeccCCCccc---------ccCC-CCCcEeeCccCcccccCCcccc----C-CCCCCEEEc
Q 041467 97 IDCGGRIDSLGHL-KSLLLLSLAFNQFLS---------LSNA-SSLEMIEFSRNQFSGGVSVDFS----R-LKNLSWLNL 160 (746)
Q Consensus 97 l~~~~~~~~~~~l-~~L~~L~Ls~N~l~~---------l~~l-~~L~~L~Ls~N~l~~~~~~~~~----~-l~~L~~L~L 160 (746)
+... ++|++|+|++|++.. +..+ ++|+.|+|++|+|++..+..+. . .++|++|+|
T Consensus 75 ---------l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~L 145 (362)
T 3goz_A 75 ---------LAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNL 145 (362)
T ss_dssp ---------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEEC
T ss_pred ---------HhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEc
Confidence 1222 566666666666632 3344 6788888888888766554433 3 258888888
Q ss_pred cCCCCCCCCCCCccccccccCCC-CCCEEEcccccccccCChhhhhc----ccccceEEcccCccccc----CCccccC-
Q 041467 161 GVNNLGSGTANELDFINLLTNCS-KLERLYFNRNGFEGVLPHSIANL----SSTIKQIAMGSNRISST----IPHGIRN- 230 (746)
Q Consensus 161 s~N~l~~~~~~~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l----~~~L~~L~l~~N~i~~~----~p~~~~~- 230 (746)
++|.++..... .++..+..++ +|++|+|++|++++..+..+... +.+|+.|++++|.|++. ++..+..
T Consensus 146 s~N~l~~~~~~--~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~ 223 (362)
T 3goz_A 146 RGNDLGIKSSD--ELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSI 223 (362)
T ss_dssp TTSCGGGSCHH--HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHS
T ss_pred cCCcCCHHHHH--HHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcC
Confidence 88887642211 2344455555 78888888888876666555543 12688888888888752 4445554
Q ss_pred CCCCCeeecccccceecCC----cCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCee
Q 041467 231 LVNLNWLTMESSQLIGTIP----PLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGL 306 (746)
Q Consensus 231 l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L 306 (746)
.++|++|+|++|.+.+..+ ..+..+++|+.|+|++|.+.+..+..+. .++..+..+++|+.|
T Consensus 224 ~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~--------------~l~~~~~~l~~L~~L 289 (362)
T 3goz_A 224 PNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCK--------------ALGAAFPNIQKIILV 289 (362)
T ss_dssp CTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHH--------------HHHTTSTTCCEEEEE
T ss_pred CCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHH--------------HHHHHhccCCceEEE
Confidence 3478888888888765433 3456778888888888886643332221 233455677778888
Q ss_pred eecCCcCccccchhhh
Q 041467 307 SVSHNKLTSTLPQQIL 322 (746)
Q Consensus 307 ~Ls~N~l~~~~p~~~~ 322 (746)
|+++|++.+..|..+.
T Consensus 290 dL~~N~l~~~~~~~~~ 305 (362)
T 3goz_A 290 DKNGKEIHPSHSIPIS 305 (362)
T ss_dssp CTTSCBCCGGGCHHHH
T ss_pred ecCCCcCCCcchHHHH
Confidence 8888888766554443
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.9e-23 Score=214.61 Aligned_cols=202 Identities=20% Similarity=0.226 Sum_probs=154.9
Q ss_pred cccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 15 ILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
..+++++.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|.+.+. +.
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~---------- 72 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV---------- 72 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC----------
T ss_pred cccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC----------
Confidence 45778888888888887 5666554 5788888888888877777888888888888888876432 11
Q ss_pred EEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 95 LRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 95 L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
...+++|++|+|++|+|+ .+|..+..+++|++|+|++|++++.+
T Consensus 73 ------------------------------~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~----- 116 (290)
T 1p9a_G 73 ------------------------------DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLP----- 116 (290)
T ss_dssp ------------------------------CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCC-----
T ss_pred ------------------------------CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccC-----
Confidence 123455666666666666 45666777888888888888887632
Q ss_pred ccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCC
Q 041467 175 FINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE 254 (746)
Q Consensus 175 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 254 (746)
+..|.++++|++|+|++|++++..+..|..++ +|+.|++++|+|++..+..|..+++|+.|+|++|++. .+|..+..
T Consensus 117 -~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~ 193 (290)
T 1p9a_G 117 -LGALRGLGELQELYLKGNELKTLPPGLLTPTP-KLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFG 193 (290)
T ss_dssp -SSTTTTCTTCCEEECTTSCCCCCCTTTTTTCT-TCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTT
T ss_pred -HHHHcCCCCCCEEECCCCCCCccChhhccccc-CCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcc
Confidence 34577788888888888888866666667776 6889999999998766667888999999999999997 67888888
Q ss_pred CCCCceeeccccccc
Q 041467 255 TPNLQLLNIGGNHLQ 269 (746)
Q Consensus 255 l~~L~~L~Ls~N~l~ 269 (746)
+++|+.|+|++|.+.
T Consensus 194 ~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 194 SHLLPFAFLHGNPWL 208 (290)
T ss_dssp TCCCSEEECCSCCBC
T ss_pred cccCCeEEeCCCCcc
Confidence 889999999999886
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.2e-23 Score=213.70 Aligned_cols=180 Identities=18% Similarity=0.203 Sum_probs=88.6
Q ss_pred hhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEec
Q 041467 38 IGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSL 117 (746)
Q Consensus 38 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~L 117 (746)
++++++|+++++++|.++ .+|..+. ++|+.|+|++|.+.+..+..|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~------------------------------- 51 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATL------------------------------- 51 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGG-------------------------------
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHh-------------------------------
Confidence 455666777777777766 3554443 456666666665543333322
Q ss_pred cCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccc
Q 041467 118 AFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG 197 (746)
Q Consensus 118 s~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 197 (746)
.++++|+.|+|++|+|++..+. +.+++|++|+|++|.++. +|..+..+++|++|+|++|++++
T Consensus 52 --------~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~~-------l~~~~~~l~~L~~L~l~~N~l~~ 114 (290)
T 1p9a_G 52 --------MPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQS-------LPLLGQTLPALTVLDVSFNRLTS 114 (290)
T ss_dssp --------TTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCSS-------CCCCTTTCTTCCEEECCSSCCCC
T ss_pred --------hcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCCc-------CchhhccCCCCCEEECCCCcCcc
Confidence 2233334444444444433221 455566666666665543 23334455555555555555554
Q ss_pred cCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 198 VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 198 ~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
..|..|..+. +|+.|++++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+++
T Consensus 115 l~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 115 LPLGALRGLG-ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp CCSSTTTTCT-TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cCHHHHcCCC-CCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 4444444444 3555555555554443444444444444444444444333333444444444444444443
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5e-25 Score=248.13 Aligned_cols=171 Identities=16% Similarity=0.096 Sum_probs=123.9
Q ss_pred CCCCeEeecCCeeEEE-------EEeehhhhh--------hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 483 SPANKIREGGFNIVYN-------VAMKVANLK--------QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~-------vavK~~~~~--------~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
...+.||+|+||.||+ +|+|+...+ .....+++.+|++++++++|||||++..++...+..++||
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 4567999999999995 788764321 1223456899999999999999996666666777889999
Q ss_pred hhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 548 KAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 548 e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
||+++|+|....-. +..++.|+++|++|||++ +|+||||||+|||++. .+||+|||+|+.......... ..
T Consensus 419 E~~~ggsL~~~l~~---~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~-~~ 489 (540)
T 3en9_A 419 SYINGKLAKDVIED---NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV-DL 489 (540)
T ss_dssp ECCCSEEHHHHSTT---CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH-HH
T ss_pred ECCCCCCHHHHHHH---HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc-ch
Confidence 99999998622111 778999999999999999 9999999999999998 999999999987632110000 00
Q ss_pred ccccccccccccccccccccc--cccccCCCccceeeccc
Q 041467 628 ASSSIGINGTVGYVAPVIIAA--RNLENREKRHTVMSFPQ 665 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~~~~DiwSlG~ 665 (746)
.......+||+.|||||++.. ..|+.. +|+||.+.
T Consensus 490 ~~~~~~~~GT~~y~APEv~~~~~~~Y~~~---~d~ws~vl 526 (540)
T 3en9_A 490 IVFKKAVLSTHHEKFDEIWERFLEGYKSV---YDRWEIIL 526 (540)
T ss_dssp HHHHHHHHHHCGGGHHHHHHHHHHHHHHH---CTTHHHHH
T ss_pred hhhhhhhcCCCCcCCHHHHHHHHHHHHHH---HhHHHHHH
Confidence 001235789999999999987 455544 89998765
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-24 Score=234.00 Aligned_cols=256 Identities=17% Similarity=0.166 Sum_probs=189.2
Q ss_pred CCCcccccCccccc-cccccEEecccCcCcccCc----hhhhCCc-cCcEEecccCcCCccCCccccCC-----CCCCee
Q 041467 3 SNNLLQYSKPLCIL-RTFLRYINLVNNGFNGEIP----HQIGRLI-SLERLILSNNSFSCAIPANLSSG-----SNLIKL 71 (746)
Q Consensus 3 ~n~~~~~~~~~~~~-~~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L 71 (746)
+.+-.+.+.|.+.. .++|++|||++|.+++..+ +.|..++ +|++|+|++|.|++..+..|..+ ++|++|
T Consensus 6 s~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L 85 (362)
T 3goz_A 6 TLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSL 85 (362)
T ss_dssp CCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEE
T ss_pred ccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEE
Confidence 34445555565554 4559999999999987766 7888998 99999999999998778888775 999999
Q ss_pred eCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCC-CCCCEEeccCCCcccc---------cC-CCCCcEeeCccCc
Q 041467 72 STDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHL-KSLLLLSLAFNQFLSL---------SN-ASSLEMIEFSRNQ 140 (746)
Q Consensus 72 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l-~~L~~L~Ls~N~l~~l---------~~-l~~L~~L~Ls~N~ 140 (746)
+|++|.+.+..+..+.. .+..+ ++|+.|+|++|++... .. .++|++|+|++|+
T Consensus 86 ~Ls~n~l~~~~~~~l~~----------------~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 149 (362)
T 3goz_A 86 NLSGNFLSYKSSDELVK----------------TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGND 149 (362)
T ss_dssp ECCSSCGGGSCHHHHHH----------------HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSC
T ss_pred ECcCCcCChHHHHHHHH----------------HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCc
Confidence 99999997766665432 23344 6777777788877432 23 3688999999998
Q ss_pred ccccCC----ccccCCC-CCCEEEccCCCCCCCCCCCccccccccCC-CCCCEEEccccccccc----CChhhhhccccc
Q 041467 141 FSGGVS----VDFSRLK-NLSWLNLGVNNLGSGTANELDFINLLTNC-SKLERLYFNRNGFEGV----LPHSIANLSSTI 210 (746)
Q Consensus 141 l~~~~~----~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l-~~L~~L~Ls~N~l~~~----~p~~~~~l~~~L 210 (746)
|+.... ..+..++ +|++|+|++|.++..... .+...+..+ ++|++|+|++|.+++. ++..+.....+|
T Consensus 150 l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~--~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L 227 (362)
T 3goz_A 150 LGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCA--ELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHV 227 (362)
T ss_dssp GGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH--HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTC
T ss_pred CCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHH--HHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCc
Confidence 885433 3345555 899999999988763221 223345556 5899999999998853 555666654479
Q ss_pred ceEEcccCcccccCC----ccccCCCCCCeeeccccccee-------cCCcCCCCCCCCceeecccccccccccccc
Q 041467 211 KQIAMGSNRISSTIP----HGIRNLVNLNWLTMESSQLIG-------TIPPLIGETPNLQLLNIGGNHLQGSILSSL 276 (746)
Q Consensus 211 ~~L~l~~N~i~~~~p----~~~~~l~~L~~L~L~~N~l~~-------~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l 276 (746)
+.|++++|.|++..+ ..+..+++|+.|+|++|.+.+ .++..+..+++|+.||+++|.+.+..+..+
T Consensus 228 ~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 228 VSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp CEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred eEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 999999999986443 346778999999999998432 244578889999999999999987644433
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-22 Score=206.73 Aligned_cols=202 Identities=18% Similarity=0.258 Sum_probs=146.1
Q ss_pred CCCEEeccCCCcccccC--CCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEE
Q 041467 111 SLLLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188 (746)
Q Consensus 111 ~L~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L 188 (746)
+.+.+++++|++..++. .++|+.|+|++|++++..+..|..+++|++|+|++|.++..+ +..|.++++|++|
T Consensus 17 ~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~------~~~~~~l~~L~~L 90 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP------AGIFKELKNLETL 90 (270)
T ss_dssp TTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC------TTTTSSCTTCCEE
T ss_pred CCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC------hhhhcCCCCCCEE
Confidence 46677788887766543 346888888888888777777888888888888888887532 2345677888888
Q ss_pred EcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccc
Q 041467 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL 268 (746)
Q Consensus 189 ~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 268 (746)
+|++|++++..+..|..+. +|++|++++|++++..|..|.++++|++|+|++|++.+..+..|..+++|+.|+|++|++
T Consensus 91 ~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 169 (270)
T 2o6q_A 91 WVTDNKLQALPIGVFDQLV-NLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQL 169 (270)
T ss_dssp ECCSSCCCCCCTTTTTTCS-SCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCcCCHhHccccc-CCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcC
Confidence 8888888765556666666 688888888888876667777888888888888888766666677788888888887776
Q ss_pred cccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCcccccc
Q 041467 269 QGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGS 341 (746)
Q Consensus 269 ~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~ 341 (746)
++ ..+..|..+++|+.|+|++|++++..+..+..+..+ +.|++++|++...
T Consensus 170 ~~---------------------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 170 KR---------------------VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKL-KMLQLQENPWDCT 220 (270)
T ss_dssp SC---------------------CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC-CEEECCSSCBCCS
T ss_pred cE---------------------eChhHhccCCCcCEEECCCCcCCcCCHHHhccccCC-CEEEecCCCeeCC
Confidence 63 223446677778888888888875444446666777 5677777777643
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-24 Score=250.65 Aligned_cols=339 Identities=14% Similarity=0.077 Sum_probs=224.0
Q ss_pred cccEEecccCc-Cc-ccCchhhhCCccCcEEecccCcCCcc----CCccccCCCCCCeeeCcCCCCC----CccchhhcC
Q 041467 19 FLRYINLVNNG-FN-GEIPHQIGRLISLERLILSNNSFSCA----IPANLSSGSNLIKLSTDSNNLV----RDILTEICS 88 (746)
Q Consensus 19 ~L~~L~Ls~N~-l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~ 88 (746)
+|++|+|++|. ++ ..++....++++|++|+|++|.+++. ++..+.++++|++|++++|.+. +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 38888888876 22 12334445788888888888887655 3445566788888888888876 344555667
Q ss_pred CCCCCEEEccCCCC---cCcccCCCCCCEEeccCCCc--------ccccCCCCCcEeeCccCcccccCCccccCCCCCCE
Q 041467 89 LFKLERLRIDCGGR---IDSLGHLKSLLLLSLAFNQF--------LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSW 157 (746)
Q Consensus 89 l~~L~~L~l~~~~~---~~~~~~l~~L~~L~Ls~N~l--------~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 157 (746)
+++|+.|+++.+.. +..+.++++|+.|+++.+.. ..+..+++|+.|+++++.. +.+|..+..+++|++
T Consensus 219 ~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~ 297 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRK 297 (592)
T ss_dssp CTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCE
T ss_pred CCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcE
Confidence 88888888877432 24567778888888874322 3456777888888887643 355667777888888
Q ss_pred EEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccc-cCChhhhhcccccceEEcc-----------cCccccc-C
Q 041467 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG-VLPHSIANLSSTIKQIAMG-----------SNRISST-I 224 (746)
Q Consensus 158 L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~~L~~L~l~-----------~N~i~~~-~ 224 (746)
|+|++|.++.. .+...+..+++|+.|+++ |.+.. .++..+..++ +|+.|+++ .|.+++. +
T Consensus 298 L~Ls~~~l~~~-----~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~-~L~~L~L~~g~~~~~~~~~~~~~~~~~~ 370 (592)
T 3ogk_B 298 LDLLYALLETE-----DHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCK-QLKRLRIERGADEQGMEDEEGLVSQRGL 370 (592)
T ss_dssp EEETTCCCCHH-----HHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCT-TCCEEEEECCCCSSTTSSTTCCCCHHHH
T ss_pred EecCCCcCCHH-----HHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCC-CCCEEEeecCccccccccccCccCHHHH
Confidence 88888876541 223446778888888888 44432 3333334454 68888888 3566543 2
Q ss_pred CccccCCCCCCeeecccccceecCCcCCCC-CCCCceeecc----ccccccc-----c---cccccccChHHhhh--ccC
Q 041467 225 PHGIRNLVNLNWLTMESSQLIGTIPPLIGE-TPNLQLLNIG----GNHLQGS-----I---LSSLGNLTLQTYLF--NNL 289 (746)
Q Consensus 225 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~---~~~l~~l~~l~~l~--n~l 289 (746)
+..+..+++|++|+++.|++++..+..++. +++|+.|+++ .|.+++. + ...+.+|+.|++.+ +.+
T Consensus 371 ~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l 450 (592)
T 3ogk_B 371 IALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGL 450 (592)
T ss_dssp HHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGC
T ss_pred HHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCc
Confidence 223455788888888888887666555554 7788888886 6677653 1 22344555555532 235
Q ss_pred CCCCCcccc-CCCCCCeeeecCCcCcc-ccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCC
Q 041467 290 QGNIPSSLA-NCKSLLGLSVSHNKLTS-TLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFF 367 (746)
Q Consensus 290 ~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L 367 (746)
++..+..++ .+++|++|++++|++++ .++..+..+++| +.|++++|.+++.....+. ..+++|
T Consensus 451 ~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L-~~L~l~~n~l~~~~~~~~~--------------~~l~~L 515 (592)
T 3ogk_B 451 TDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNL-QKLEMRGCCFSERAIAAAV--------------TKLPSL 515 (592)
T ss_dssp CHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTC-CEEEEESCCCBHHHHHHHH--------------HHCSSC
T ss_pred cHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCccc-CeeeccCCCCcHHHHHHHH--------------HhcCcc
Confidence 544444444 37889999999999986 355556777888 6899999998754333321 134566
Q ss_pred CEEEccCCcCccc
Q 041467 368 ELLNLSYNYFGSE 380 (746)
Q Consensus 368 ~~L~ls~N~l~~~ 380 (746)
+.|++++|+++..
T Consensus 516 ~~L~ls~n~it~~ 528 (592)
T 3ogk_B 516 RYLWVQGYRASMT 528 (592)
T ss_dssp CEEEEESCBCCTT
T ss_pred CeeECcCCcCCHH
Confidence 8888888887764
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.7e-25 Score=238.83 Aligned_cols=272 Identities=19% Similarity=0.233 Sum_probs=170.0
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCC----ccccCCCCCCeeeCcCCCC---CCccchhhcCCC
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIP----ANLSSGSNLIKLSTDSNNL---VRDILTEICSLF 90 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l---~~~~~~~~~~l~ 90 (746)
..|++.+++...+. .++..+..+++|++|+|++|.|++..+ ..|..+++|++|+|++|.+ .+.+|..+..+.
T Consensus 9 ~~L~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~ 87 (386)
T 2ca6_A 9 KSLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLL 87 (386)
T ss_dssp CCCEESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHH
T ss_pred cccccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHH
Confidence 34555555555554 688889999999999999999987644 4477899999999988643 344454432110
Q ss_pred CCCEEEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccc----cCCccccCCCCCCEEEccCCCCC
Q 041467 91 KLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSG----GVSVDFSRLKNLSWLNLGVNNLG 166 (746)
Q Consensus 91 ~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~ 166 (746)
. .+..+++|++|+|++|++++ .++..+..+++|++|+|++|.++
T Consensus 88 -------------~-------------------~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 88 -------------Q-------------------ALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp -------------H-------------------HHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred -------------H-------------------HHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 1 22334445555555555554 24445556666666666666654
Q ss_pred CCCCCCccccccccCC---------CCCCEEEccccccc-ccCC---hhhhhcccccceEEcccCccc--c---cCCccc
Q 041467 167 SGTANELDFINLLTNC---------SKLERLYFNRNGFE-GVLP---HSIANLSSTIKQIAMGSNRIS--S---TIPHGI 228 (746)
Q Consensus 167 ~~~~~~~~~~~~~~~l---------~~L~~L~Ls~N~l~-~~~p---~~~~~l~~~L~~L~l~~N~i~--~---~~p~~~ 228 (746)
..... .++..+..+ ++|++|+|++|+++ +.+| ..+..++ +|+.|++++|+|+ | ..|..+
T Consensus 136 ~~~~~--~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~-~L~~L~L~~n~l~~~g~~~l~~~~l 212 (386)
T 2ca6_A 136 PQAGA--KIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHR-LLHTVKMVQNGIRPEGIEHLLLEGL 212 (386)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCT-TCCEEECCSSCCCHHHHHHHHHTTG
T ss_pred HHHHH--HHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCC-CcCEEECcCCCCCHhHHHHHHHHHh
Confidence 21000 122223333 66777777777665 3333 3444554 5777777777766 2 344467
Q ss_pred cCCCCCCeeecccccce----ecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccc--cCCCC
Q 041467 229 RNLVNLNWLTMESSQLI----GTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSL--ANCKS 302 (746)
Q Consensus 229 ~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~--~~l~~ 302 (746)
..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++.... .+|..+ +.+++
T Consensus 213 ~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~-----------------~l~~~l~~~~~~~ 275 (386)
T 2ca6_A 213 AYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA-----------------AVVDAFSKLENIG 275 (386)
T ss_dssp GGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH-----------------HHHHHHHTCSSCC
T ss_pred hcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH-----------------HHHHHHhhccCCC
Confidence 77778888888888875 56677777788888888888877643111 123344 34777
Q ss_pred CCeeeecCCcCcc----ccchhh-hhcccccceEEccCccccccCc
Q 041467 303 LLGLSVSHNKLTS----TLPQQI-LSVTTLSLYLELDNNLLNGSLP 343 (746)
Q Consensus 303 L~~L~Ls~N~l~~----~~p~~~-~~l~~l~~~L~Ls~N~l~~~~p 343 (746)
|+.|+|++|++++ .+|..+ .++++| ++|++++|++++..|
T Consensus 276 L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L-~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 276 LQTLRLQYNEIELDAVRTLKTVIDEKMPDL-LFLELNGNRFSEEDD 320 (386)
T ss_dssp CCEEECCSSCCBHHHHHHHHHHHHHHCTTC-CEEECTTSBSCTTSH
T ss_pred eEEEECcCCcCCHHHHHHHHHHHHhcCCCc-eEEEccCCcCCcchh
Confidence 8888888888876 477777 446777 578888888876554
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.9e-23 Score=215.80 Aligned_cols=158 Identities=15% Similarity=0.162 Sum_probs=113.4
Q ss_pred CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCCh----h
Q 041467 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPH----S 202 (746)
Q Consensus 127 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~----~ 202 (746)
.+++|++|+|++|++++..+..|+.+++|++|+|++|++.+... +..+..+..+++|++|+|++|+++ .+|. .
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l 219 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERG--LMAALCPHKFPAIQNLALRNTGME-TPTGVCAAL 219 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHH--HHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchh--hhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHH
Confidence 56788888888888888888888889999999999998754100 001123467888889999998886 3333 2
Q ss_pred hhhcccccceEEcccCcccccCCccccCC---CCCCeeecccccceecCCcCCCCCCCCceeeccccccccccccccccc
Q 041467 203 IANLSSTIKQIAMGSNRISSTIPHGIRNL---VNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNL 279 (746)
Q Consensus 203 ~~~l~~~L~~L~l~~N~i~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 279 (746)
+..+. +|++|++++|+|++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|+|++|++++
T Consensus 220 ~~~l~-~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~--------- 286 (310)
T 4glp_A 220 AAAGV-QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNR--------- 286 (310)
T ss_dssp HHHTC-CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCS---------
T ss_pred HhcCC-CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCC---------
Confidence 34555 68888888888887777777666 58888888888887 5666654 678888888887763
Q ss_pred ChHHhhhccCCCCCCccccCCCCCCeeeecCCcCc
Q 041467 280 TLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT 314 (746)
Q Consensus 280 ~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 314 (746)
+|. +..+++|+.|+|++|+|+
T Consensus 287 -------------~~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 287 -------------APQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp -------------CCC-TTSCCCCSCEECSSTTTS
T ss_pred -------------Cch-hhhCCCccEEECcCCCCC
Confidence 122 345677788888888776
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=217.40 Aligned_cols=243 Identities=16% Similarity=0.111 Sum_probs=171.1
Q ss_pred cEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCC
Q 041467 21 RYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCG 100 (746)
Q Consensus 21 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~ 100 (746)
+.++.++++++ .+|..+ .+++++|+|++|+|+.+.+..|.++++|++|+|++|++.+.+|..
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~--------------- 73 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD--------------- 73 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT---------------
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh---------------
Confidence 57899999998 788776 368999999999999655567999999999999999987766542
Q ss_pred CCcCcccCCCCCCEEeccCCCcccccCCCCCc-EeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccc
Q 041467 101 GRIDSLGHLKSLLLLSLAFNQFLSLSNASSLE-MIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLL 179 (746)
Q Consensus 101 ~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 179 (746)
+|. ++++|. .+.++.|+|+++.|..|..+++|++|++++|.++..+. ..+
T Consensus 74 ----~f~-------------------~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~------~~~ 124 (350)
T 4ay9_X 74 ----VFS-------------------NLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD------VHK 124 (350)
T ss_dssp ----SBC-------------------SCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCC------CTT
T ss_pred ----Hhh-------------------cchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCc------hhh
Confidence 122 233322 34556677777777778888888888888888876332 223
Q ss_pred cCCCCCCEEEccc-ccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccc-ccceecCCcCCCCCCC
Q 041467 180 TNCSKLERLYFNR-NGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMES-SQLIGTIPPLIGETPN 257 (746)
Q Consensus 180 ~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~ 257 (746)
....++..|++++ |++....+..|..+...++.|++++|+|+. +|.......+|++|++++ |.+....+..|..+++
T Consensus 125 ~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~ 203 (350)
T 4ay9_X 125 IHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASG 203 (350)
T ss_dssp CCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEEC
T ss_pred cccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcc
Confidence 4455677777765 456644455566665567888888888885 444444556788888875 4444333456788888
Q ss_pred CceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCc
Q 041467 258 LQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNK 312 (746)
Q Consensus 258 L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 312 (746)
|++|||++|+|+...+..+.+|+.|+.++++-...+| .+.++++|+.++++++.
T Consensus 204 L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 204 PVILDISRTRIHSLPSYGLENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CSEEECTTSCCCCCCSSSCTTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHH
T ss_pred cchhhcCCCCcCccChhhhccchHhhhccCCCcCcCC-CchhCcChhhCcCCCCc
Confidence 8888888888886666667777776666544444566 37778888888887543
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-23 Score=216.47 Aligned_cols=228 Identities=16% Similarity=0.173 Sum_probs=165.5
Q ss_pred ccccEEecccCcCccc-Cch--hhhCCccCcEEecccCcCCccCCccc--cCCCCCCeeeCcCCCCCCccchhhcCCCCC
Q 041467 18 TFLRYINLVNNGFNGE-IPH--QIGRLISLERLILSNNSFSCAIPANL--SSGSNLIKLSTDSNNLVRDILTEICSLFKL 92 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~-~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 92 (746)
..++.|.++++.++.. +.. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+.+..+..-.
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~----- 138 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAE----- 138 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHH-----
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHH-----
Confidence 4578899998888632 111 22345779999999999999999988 8999999999999999765441100
Q ss_pred CEEEccCCCCcCcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCccccc---C-CccccCCCCCCEEEccCC
Q 041467 93 ERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGG---V-SVDFSRLKNLSWLNLGVN 163 (746)
Q Consensus 93 ~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~---~-~~~~~~l~~L~~L~Ls~N 163 (746)
..+..+++|++|+|++|++. .+.++++|++|+|++|++.+. . +..++.+++|++|+|++|
T Consensus 139 -----------~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N 207 (310)
T 4glp_A 139 -----------LQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNT 207 (310)
T ss_dssp -----------HHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSS
T ss_pred -----------HHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCC
Confidence 01234556666666666663 345677888888888887642 1 233467888888888888
Q ss_pred CCCCCCCCCccccc-cccCCCCCCEEEcccccccccCChhhhhcc--cccceEEcccCcccccCCccccCCCCCCeeecc
Q 041467 164 NLGSGTANELDFIN-LLTNCSKLERLYFNRNGFEGVLPHSIANLS--STIKQIAMGSNRISSTIPHGIRNLVNLNWLTME 240 (746)
Q Consensus 164 ~l~~~~~~~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~ 240 (746)
+++..+ ..+. .+..+++|++|+|++|++++..|..++.+. ++|++|++++|+|+ .+|..+. ++|++|+|+
T Consensus 208 ~l~~l~----~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls 280 (310)
T 4glp_A 208 GMETPT----GVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLS 280 (310)
T ss_dssp CCCCHH----HHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECC
T ss_pred CCCchH----HHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECC
Confidence 886411 1111 356778889999999988877777776662 37999999999998 5777664 789999999
Q ss_pred cccceecCCcCCCCCCCCceeecccccccc
Q 041467 241 SSQLIGTIPPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 241 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
+|++++. |. +..+++|+.|+|++|+++.
T Consensus 281 ~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 281 SNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp SCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 9999864 43 6788999999999998873
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=204.07 Aligned_cols=194 Identities=14% Similarity=0.150 Sum_probs=101.1
Q ss_pred EecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCC-CCCccchhhcCCCCCCEEEccCCC
Q 041467 23 INLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN-LVRDILTEICSLFKLERLRIDCGG 101 (746)
Q Consensus 23 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~~~ 101 (746)
+++..+.++ .+|. +. .+|++|+|++|++++..+..|.++++|++|++++|+ +.+..+..|.
T Consensus 16 ~~v~c~~l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~-------------- 77 (239)
T 2xwt_C 16 FRVTCKDIQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFY-------------- 77 (239)
T ss_dssp TEEEECSCS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEE--------------
T ss_pred ceeEccCcc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcC--------------
Confidence 344444465 5666 43 378888888888887666678888888888888886 5333222332
Q ss_pred CcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCcc-CcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccccccc
Q 041467 102 RIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSR-NQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLT 180 (746)
Q Consensus 102 ~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 180 (746)
+ +++|++|++++ |++++..+..|.++++|++|++++|.+++ +|. +.
T Consensus 78 ------~-------------------l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-------lp~-~~ 124 (239)
T 2xwt_C 78 ------N-------------------LSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-------FPD-LT 124 (239)
T ss_dssp ------S-------------------CTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-------CCC-CT
T ss_pred ------C-------------------CcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-------ccc-cc
Confidence 2 33333444443 44444444444445555555555554443 122 33
Q ss_pred CCCCCC---EEEcccc-cccccCChhhhhcccccc-eEEcccCcccccCCccccCCCCCCeeeccccc-ceecCCcCCCC
Q 041467 181 NCSKLE---RLYFNRN-GFEGVLPHSIANLSSTIK-QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQ-LIGTIPPLIGE 254 (746)
Q Consensus 181 ~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~~L~-~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~ 254 (746)
.+++|+ +|++++| ++++..+..|..+. +|+ .|++++|+++...+..|.. ++|+.|++++|+ +.+..+..|..
T Consensus 125 ~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~-~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~ 202 (239)
T 2xwt_C 125 KVYSTDIFFILEITDNPYMTSIPVNAFQGLC-NETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGG 202 (239)
T ss_dssp TCCBCCSEEEEEEESCTTCCEECTTTTTTTB-SSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTT
T ss_pred cccccccccEEECCCCcchhhcCcccccchh-cceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhc
Confidence 444444 5555555 45443333444444 455 5555555554222222222 455555555552 54444444555
Q ss_pred C-CCCceeeccccccc
Q 041467 255 T-PNLQLLNIGGNHLQ 269 (746)
Q Consensus 255 l-~~L~~L~Ls~N~l~ 269 (746)
+ ++|+.|++++|+++
T Consensus 203 l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 203 VYSGPSLLDVSQTSVT 218 (239)
T ss_dssp CSBCCSEEECTTCCCC
T ss_pred cccCCcEEECCCCccc
Confidence 5 55555555555554
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-22 Score=201.52 Aligned_cols=197 Identities=12% Similarity=0.138 Sum_probs=147.5
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCc-CCccCCccccCCCCCCeeeCcC-CCCCCccchhhcCCCCCCEE
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNS-FSCAIPANLSSGSNLIKLSTDS-NNLVRDILTEICSLFKLERL 95 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L 95 (746)
+.|++|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|++++ |.+.+..+..|.
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~-------- 102 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALK-------- 102 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEE--------
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhC--------
Confidence 479999999999997777799999999999999997 8876667899999999999998 888544333333
Q ss_pred EccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCC---EEEccCC-CCCCCCCC
Q 041467 96 RIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLS---WLNLGVN-NLGSGTAN 171 (746)
Q Consensus 96 ~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~~~ 171 (746)
++++|+.|++++|++++ +|. |..+++|+ +|++++| .++..
T Consensus 103 -------------------------------~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i--- 146 (239)
T 2xwt_C 103 -------------------------------ELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSI--- 146 (239)
T ss_dssp -------------------------------CCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEE---
T ss_pred -------------------------------CCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhc---
Confidence 34455555666666665 343 66677776 7777777 77652
Q ss_pred CccccccccCCCCCC-EEEcccccccccCChhhhhcccccceEEcccCc-ccccCCccccCC-CCCCeeecccccceecC
Q 041467 172 ELDFINLLTNCSKLE-RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNR-ISSTIPHGIRNL-VNLNWLTMESSQLIGTI 248 (746)
Q Consensus 172 ~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~-i~~~~p~~~~~l-~~L~~L~L~~N~l~~~~ 248 (746)
.+..|.++++|+ .|++++|+++ .+|...+... +|+.|++++|+ +++..+..|.++ ++|+.|++++|++++ +
T Consensus 147 ---~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~-~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l 220 (239)
T 2xwt_C 147 ---PVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGT-KLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-L 220 (239)
T ss_dssp ---CTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTC-EEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-C
T ss_pred ---CcccccchhcceeEEEcCCCCCc-ccCHhhcCCC-CCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-C
Confidence 223466777888 8888888887 4554444444 68888888884 887667778888 888999998888874 4
Q ss_pred CcCCCCCCCCceeecccc
Q 041467 249 PPLIGETPNLQLLNIGGN 266 (746)
Q Consensus 249 p~~~~~l~~L~~L~Ls~N 266 (746)
|.. .+++|+.|+++++
T Consensus 221 ~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 221 PSK--GLEHLKELIARNT 236 (239)
T ss_dssp CCT--TCTTCSEEECTTC
T ss_pred Chh--HhccCceeeccCc
Confidence 443 5778888888776
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7.8e-23 Score=217.51 Aligned_cols=218 Identities=16% Similarity=0.182 Sum_probs=158.7
Q ss_pred cccEEecccCcCcccCchhhhCC--ccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCc-cchhhcCCCCCCEE
Q 041467 19 FLRYINLVNNGFNGEIPHQIGRL--ISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRD-ILTEICSLFKLERL 95 (746)
Q Consensus 19 ~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L 95 (746)
.++.||+++|.+. |..+..+ ++++.|++++|.+.+..|. +..+++|++|+|++|.+.+. ++..+..+++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L--- 120 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKL--- 120 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCC---
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCC---
Confidence 4788999998886 5677777 8899999999999876554 66789999999999987654 56555555544
Q ss_pred EccCCCCcCcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccC-ccccc-CCccccCCCCCCEEEccCC-CCCC
Q 041467 96 RIDCGGRIDSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRN-QFSGG-VSVDFSRLKNLSWLNLGVN-NLGS 167 (746)
Q Consensus 96 ~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N-~l~~~-~~~~~~~l~~L~~L~Ls~N-~l~~ 167 (746)
+.|+|++|++. .+..+++|++|+|++| .+++. ++..+..+++|++|+|++| .++.
T Consensus 121 -----------------~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~ 183 (336)
T 2ast_B 121 -----------------QNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE 183 (336)
T ss_dssp -----------------SEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH
T ss_pred -----------------CEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh
Confidence 44455555542 3556777777778777 56652 5556777888888888888 7764
Q ss_pred CCCCCccccccccCCC-CCCEEEcccc--ccc-ccCChhhhhcccccceEEcccCc-ccccCCccccCCCCCCeeecccc
Q 041467 168 GTANELDFINLLTNCS-KLERLYFNRN--GFE-GVLPHSIANLSSTIKQIAMGSNR-ISSTIPHGIRNLVNLNWLTMESS 242 (746)
Q Consensus 168 ~~~~~~~~~~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~~L~~L~l~~N~-i~~~~p~~~~~l~~L~~L~L~~N 242 (746)
. .++..+..++ +|++|++++| .++ +.+|..+..++ +|+.|++++|. +++..+..+..+++|++|++++|
T Consensus 184 ~-----~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~-~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 184 K-----HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCP-NLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp H-----HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCT-TCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred H-----HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCC-CCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 1 1456677788 8888888888 454 45666677776 68888888888 67667778888888888888888
Q ss_pred c-ceecCCcCCCCCCCCceeecccc
Q 041467 243 Q-LIGTIPPLIGETPNLQLLNIGGN 266 (746)
Q Consensus 243 ~-l~~~~p~~~~~l~~L~~L~Ls~N 266 (746)
. +.......++++++|+.|++++|
T Consensus 258 ~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 258 YDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp TTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCHHHHHHHhcCCCCCEEeccCc
Confidence 5 22211125778888999998888
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=205.28 Aligned_cols=207 Identities=20% Similarity=0.284 Sum_probs=135.6
Q ss_pred cEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCC
Q 041467 21 RYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCG 100 (746)
Q Consensus 21 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~ 100 (746)
..+.+..+.+....+ +..+++|++|++++|.++. +| .+..+++|++|+|++|.+.+..+ +..+++|++|
T Consensus 22 ~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L----- 90 (308)
T 1h6u_A 22 IKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITEL----- 90 (308)
T ss_dssp HHHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEE-----
T ss_pred HHHHhCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEE-----
Confidence 344555555543322 3456667777777776663 44 46666777777777666643222 4333333333
Q ss_pred CCcCcccCCCCCCEEeccCCCc---ccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccc
Q 041467 101 GRIDSLGHLKSLLLLSLAFNQF---LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFIN 177 (746)
Q Consensus 101 ~~~~~~~~l~~L~~L~Ls~N~l---~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 177 (746)
+|++|++ ..+..+++|+.|+|++|++++.. .+..+++|++|+|++|.+++. +.
T Consensus 91 ---------------~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~-------~~ 146 (308)
T 1h6u_A 91 ---------------ELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNI-------SP 146 (308)
T ss_dssp ---------------ECCSCCCSCCGGGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCC-------GG
T ss_pred ---------------EccCCcCCCchhhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcC-------cc
Confidence 3333333 23445667777777777777543 277788888888888887652 22
Q ss_pred cccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCC
Q 041467 178 LLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257 (746)
Q Consensus 178 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 257 (746)
+..+++|+.|++++|++++ ++. +..++ +|+.|++++|++++..+ +..+++|++|+|++|++.+..| +..+++
T Consensus 147 -l~~l~~L~~L~l~~n~l~~-~~~-l~~l~-~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~ 218 (308)
T 1h6u_A 147 -LAGLTNLQYLSIGNAQVSD-LTP-LANLS-KLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSN 218 (308)
T ss_dssp -GGGCTTCCEEECCSSCCCC-CGG-GTTCT-TCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTT
T ss_pred -ccCCCCccEEEccCCcCCC-Chh-hcCCC-CCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCC
Confidence 6677888888888888874 333 66666 68888888888875433 7788888888888888876543 788888
Q ss_pred Cceeecccccccc
Q 041467 258 LQLLNIGGNHLQG 270 (746)
Q Consensus 258 L~~L~Ls~N~l~~ 270 (746)
|+.|+|++|.+++
T Consensus 219 L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 219 LFIVTLTNQTITN 231 (308)
T ss_dssp CCEEEEEEEEEEC
T ss_pred CCEEEccCCeeec
Confidence 8899998888874
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4.3e-23 Score=223.97 Aligned_cols=237 Identities=18% Similarity=0.242 Sum_probs=174.9
Q ss_pred cccccccEEecccCcCcccCc----hhhhCCccCcEEecccCc---CCccCCccc-------cCCCCCCeeeCcCCCCCC
Q 041467 15 ILRTFLRYINLVNNGFNGEIP----HQIGRLISLERLILSNNS---FSCAIPANL-------SSGSNLIKLSTDSNNLVR 80 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~---l~~~~p~~~-------~~l~~L~~L~L~~N~l~~ 80 (746)
..+++|++|+|++|.++...+ ..+..+++|++|+|++|. +++.+|..+ ..+++|++|+|++|.+..
T Consensus 29 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 108 (386)
T 2ca6_A 29 LEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGP 108 (386)
T ss_dssp HHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCT
T ss_pred hcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCH
Confidence 346889999999999987644 447789999999999964 455566655 688999999999999876
Q ss_pred ----ccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcc-----cc----cCC---------CCCcEeeCcc
Q 041467 81 ----DILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL-----SL----SNA---------SSLEMIEFSR 138 (746)
Q Consensus 81 ----~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-----~l----~~l---------~~L~~L~Ls~ 138 (746)
.+|..+.. +++|+.|+|++|.+. .+ ..+ ++|+.|+|++
T Consensus 109 ~~~~~l~~~l~~--------------------~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~ 168 (386)
T 2ca6_A 109 TAQEPLIDFLSK--------------------HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGR 168 (386)
T ss_dssp TTHHHHHHHHHH--------------------CTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCS
T ss_pred HHHHHHHHHHHh--------------------CCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCC
Confidence 35555544 445555555666652 12 222 7888888888
Q ss_pred Cccc-ccCC---ccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEccccccc----ccCChhhhhccccc
Q 041467 139 NQFS-GGVS---VDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFE----GVLPHSIANLSSTI 210 (746)
Q Consensus 139 N~l~-~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~~L 210 (746)
|+++ +..+ ..+..+++|++|+|++|.++...... ..+..+..+++|+.|+|++|.++ +.+|..+..++ +|
T Consensus 169 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~-l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~-~L 246 (386)
T 2ca6_A 169 NRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEH-LLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP-NL 246 (386)
T ss_dssp SCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHH-HHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT-TC
T ss_pred CCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHH-HHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCC-Cc
Confidence 8886 3344 35667888888888888886200000 12226778888999999999885 56777787777 69
Q ss_pred ceEEcccCccccc----CCcccc--CCCCCCeeeccccccee----cCCcCC-CCCCCCceeeccccccccccc
Q 041467 211 KQIAMGSNRISST----IPHGIR--NLVNLNWLTMESSQLIG----TIPPLI-GETPNLQLLNIGGNHLQGSIL 273 (746)
Q Consensus 211 ~~L~l~~N~i~~~----~p~~~~--~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~~ 273 (746)
+.|+|++|+|++. +|..+. .+++|+.|+|++|.+.+ .+|..+ .++++|++|+|++|.+++..+
T Consensus 247 ~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 247 RELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 9999999998865 566663 48999999999999987 477766 668999999999999986553
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-21 Score=196.21 Aligned_cols=178 Identities=18% Similarity=0.249 Sum_probs=130.2
Q ss_pred CCCEEeccCCCcccccC--CCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEE
Q 041467 111 SLLLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188 (746)
Q Consensus 111 ~L~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L 188 (746)
+.+.++++++.+..++. .++|+.|+|++|++++..+..|.++++|++|+|++|.+++. .+..|..+++|++|
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~------~~~~~~~l~~L~~L 88 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTL------SAGVFDDLTELGTL 88 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCC------CTTTTTTCTTCCEE
T ss_pred CCeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCcc------CHhHhccCCcCCEE
Confidence 45667777777766542 35788888888888877777788888888888888888762 33456777888888
Q ss_pred EcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccc
Q 041467 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL 268 (746)
Q Consensus 189 ~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 268 (746)
+|++|++++..+..|..+. +|++|++++|+|++..+..|..+++|++|+|++|++.+..+..|+.+++|++|+|++|++
T Consensus 89 ~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 167 (251)
T 3m19_A 89 GLANNQLASLPLGVFDHLT-QLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167 (251)
T ss_dssp ECTTSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCcccccChhHhcccC-CCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcC
Confidence 8888888766666666776 688888888888766666677788888888888887766666777778888888887777
Q ss_pred cccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccc
Q 041467 269 QGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTST 316 (746)
Q Consensus 269 ~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 316 (746)
++ ..+..|..+++|+.|+|++|.+++.
T Consensus 168 ~~---------------------~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 168 QS---------------------VPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SC---------------------CCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred Cc---------------------cCHHHHhCCCCCCEEEeeCCceeCC
Confidence 63 2334566777788888888887754
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-21 Score=195.77 Aligned_cols=181 Identities=20% Similarity=0.253 Sum_probs=108.9
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
...++++++++.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+.+..+..+
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~----------- 79 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVF----------- 79 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTT-----------
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHh-----------
Confidence 45667777777776 5665554 467777777777776666667777777777776666644333222
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFIN 177 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 177 (746)
.++++|++|+|++|+|++..+..|..+++|++|+|++|.|
T Consensus 80 ----------------------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l------------ 119 (251)
T 3m19_A 80 ----------------------------DDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQL------------ 119 (251)
T ss_dssp ----------------------------TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCC------------
T ss_pred ----------------------------ccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcC------------
Confidence 2233344444444445444444444555555555555544
Q ss_pred cccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCC
Q 041467 178 LLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257 (746)
Q Consensus 178 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 257 (746)
++..+..|..+. +|+.|++++|+|++..+..|+.+++|++|+|++|++.+..+..|..+++
T Consensus 120 ------------------~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 180 (251)
T 3m19_A 120 ------------------KSLPSGVFDRLT-KLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGK 180 (251)
T ss_dssp ------------------CCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred ------------------CCcChhHhccCC-cccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCC
Confidence 433333344444 4666666666666545556667777777777777777666667777777
Q ss_pred Cceeeccccccccc
Q 041467 258 LQLLNIGGNHLQGS 271 (746)
Q Consensus 258 L~~L~Ls~N~l~~~ 271 (746)
|+.|+|++|.+.+.
T Consensus 181 L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 181 LQTITLFGNQFDCS 194 (251)
T ss_dssp CCEEECCSCCBCTT
T ss_pred CCEEEeeCCceeCC
Confidence 77777777777643
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-22 Score=214.33 Aligned_cols=252 Identities=19% Similarity=0.217 Sum_probs=180.9
Q ss_pred cCcEEecccCcCCccCCccccCC--CCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCC
Q 041467 43 SLERLILSNNSFSCAIPANLSSG--SNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFN 120 (746)
Q Consensus 43 ~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N 120 (746)
.++.||+++|.+. |..+..+ ++++.|++++|.+.+..+. +..+++|+.|+|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~---------------------~~~~~~L~~L~L~~~ 103 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE---------------------HFSPFRVQHMDLSNS 103 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS---------------------CCCCBCCCEEECTTC
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh---------------------hccCCCCCEEEccCC
Confidence 4778888888776 4566666 7888888888877554332 335667777777777
Q ss_pred Ccc------cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCC-CCCCCCCCCccccccccCCCCCCEEEcccc
Q 041467 121 QFL------SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVN-NLGSGTANELDFINLLTNCSKLERLYFNRN 193 (746)
Q Consensus 121 ~l~------~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N 193 (746)
.+. .+..+++|++|+|++|++++..+..++.+++|++|+|++| .+++ ..++..+.++++|++|++++|
T Consensus 104 ~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~-----~~l~~~~~~~~~L~~L~l~~~ 178 (336)
T 2ast_B 104 VIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSE-----FALQTLLSSCSRLDELNLSWC 178 (336)
T ss_dssp EECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCH-----HHHHHHHHHCTTCCEEECCCC
T ss_pred CcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCH-----HHHHHHHhcCCCCCEEcCCCC
Confidence 763 2467889999999999888878888888899999999988 5653 024556778888999999998
Q ss_pred -ccccc-CChhhhhcccccceEEcccC--ccc-ccCCccccCCCCCCeeeccccc-ceecCCcCCCCCCCCceeeccccc
Q 041467 194 -GFEGV-LPHSIANLSSTIKQIAMGSN--RIS-STIPHGIRNLVNLNWLTMESSQ-LIGTIPPLIGETPNLQLLNIGGNH 267 (746)
Q Consensus 194 -~l~~~-~p~~~~~l~~~L~~L~l~~N--~i~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~ 267 (746)
.+++. ++..+..++.+|+.|++++| .++ +.+|..+.++++|++|++++|. +++..+..+..+++|++|++++|.
T Consensus 179 ~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 179 FDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp TTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 88754 56667776535889999888 454 4567777888888999998888 666677788888888888888885
Q ss_pred ccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhccc-ccceEEccCccccccCchhh
Q 041467 268 LQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTT-LSLYLELDNNLLNGSLPPEV 346 (746)
Q Consensus 268 l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-l~~~L~Ls~N~l~~~~p~~~ 346 (746)
+..+..+ ..++.+++|+.|++++| ++. ..+..+.. + ..|++++|++++..|..+
T Consensus 259 --~~~~~~~------------------~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l-~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 259 --DIIPETL------------------LELGEIPTLKTLQVFGI-VPD---GTLQLLKEAL-PHLQINCSHFTTIARPTI 313 (336)
T ss_dssp --TCCGGGG------------------GGGGGCTTCCEEECTTS-SCT---TCHHHHHHHS-TTSEESCCCSCCTTCSSC
T ss_pred --CCCHHHH------------------HHHhcCCCCCEEeccCc-cCH---HHHHHHHhhC-cceEEecccCccccCCcc
Confidence 1111111 24567888899999888 432 12333322 4 457788888888888776
Q ss_pred hc
Q 041467 347 GN 348 (746)
Q Consensus 347 ~~ 348 (746)
++
T Consensus 314 ~~ 315 (336)
T 2ast_B 314 GN 315 (336)
T ss_dssp SS
T ss_pred cc
Confidence 54
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-22 Score=207.01 Aligned_cols=144 Identities=18% Similarity=0.176 Sum_probs=115.4
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhh------------------hhhHHHHHHHHHhhcCCC
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQK------------------EASRSFAAEFNALRNIRH 527 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~H 527 (746)
.+......|+..+.||+|+||.||+ ||||++..... .....+.+|++++++++|
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~ 163 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG 163 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence 3344445677789999999999996 89999854321 134568999999999995
Q ss_pred CceeeEEEEEecCCcccchhhhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEE
Q 041467 528 RNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV 607 (746)
Q Consensus 528 pnIv~l~~~~~~~~~~~lv~e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki 607 (746)
+ ++.+++. .+..++||||+++|+|.. +...+...++.|++.|++|||+. +|+||||||+|||++ ++.+||
T Consensus 164 ~---~v~~~~~-~~~~~lvmE~~~g~~L~~--l~~~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl 233 (282)
T 1zar_A 164 L---AVPKVYA-WEGNAVLMELIDAKELYR--VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWI 233 (282)
T ss_dssp S---SSCCEEE-EETTEEEEECCCCEEGGG--CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEE
T ss_pred C---CcCeEEe-ccceEEEEEecCCCcHHH--cchhhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEE
Confidence 4 4444433 356799999999999976 44456678999999999999999 999999999999999 999999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccc
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA 648 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 648 (746)
+|||+|+. +..|+|||++..
T Consensus 234 ~DFG~a~~---------------------~~~~~a~e~l~r 253 (282)
T 1zar_A 234 IDFPQSVE---------------------VGEEGWREILER 253 (282)
T ss_dssp CCCTTCEE---------------------TTSTTHHHHHHH
T ss_pred EECCCCeE---------------------CCCCCHHHHHHH
Confidence 99999974 346899999864
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.4e-24 Score=244.21 Aligned_cols=379 Identities=14% Similarity=0.096 Sum_probs=197.8
Q ss_pred cccccccEEecccCcCcc---cCc------------hhhhCCccCcEEecccCcCCccCCcccc-CCCCCCeeeCcCCCC
Q 041467 15 ILRTFLRYINLVNNGFNG---EIP------------HQIGRLISLERLILSNNSFSCAIPANLS-SGSNLIKLSTDSNNL 78 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~---~~p------------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l 78 (746)
..+++|+.|+|+++.... ..| ..+..+++|++|+|++|.+++..+..+. .+++|++|+|++|..
T Consensus 63 ~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~ 142 (594)
T 2p1m_B 63 RRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEG 142 (594)
T ss_dssp HHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEE
T ss_pred hhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCC
Confidence 346778888888875321 222 2234677888888888888776666665 578888888888733
Q ss_pred CCc--cchhhcCCCCCCEEEccCCCCc--------CcccCCCCCCEEeccCCC--c--cc----ccCCCCCcEeeCccC-
Q 041467 79 VRD--ILTEICSLFKLERLRIDCGGRI--------DSLGHLKSLLLLSLAFNQ--F--LS----LSNASSLEMIEFSRN- 139 (746)
Q Consensus 79 ~~~--~~~~~~~l~~L~~L~l~~~~~~--------~~~~~l~~L~~L~Ls~N~--l--~~----l~~l~~L~~L~Ls~N- 139 (746)
.+. ++..+.++++|++|+++.+... .....+++|+.|++++|. + .. +.++++|+.|++++|
T Consensus 143 ~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~ 222 (594)
T 2p1m_B 143 FSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAV 222 (594)
T ss_dssp EEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTS
T ss_pred CCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCC
Confidence 222 4444557888888888765411 222366788888888886 3 11 234688888888887
Q ss_pred cccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEE-EcccccccccCChhhhhcccccceEEcccC
Q 041467 140 QFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL-YFNRNGFEGVLPHSIANLSSTIKQIAMGSN 218 (746)
Q Consensus 140 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L-~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N 218 (746)
.+++ ++..+..+++|+.|+++.+...-.......++..+.++++|+.| .+.+... +.+|..+..++ +|+.|++++|
T Consensus 223 ~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~-~L~~L~L~~~ 299 (594)
T 2p1m_B 223 PLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCS-RLTTLNLSYA 299 (594)
T ss_dssp CHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHT-TCCEEECTTC
T ss_pred cHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccch-hhHHHHHHhhC-CCCEEEccCC
Confidence 4443 66677778888888866543200000000122344555556655 3333222 23343333443 4666666665
Q ss_pred cccccCC-ccccCCCCCCeeecccccce-ecCCcCCCCCCCCceeecc---------ccccccccc----ccccccChHH
Q 041467 219 RISSTIP-HGIRNLVNLNWLTMESSQLI-GTIPPLIGETPNLQLLNIG---------GNHLQGSIL----SSLGNLTLQT 283 (746)
Q Consensus 219 ~i~~~~p-~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls---------~N~l~~~~~----~~l~~l~~l~ 283 (746)
.+++... ..+.++++|+.|++++| +. ..++.....+++|+.|+++ .|.+++... ..+.+|+.+.
T Consensus 300 ~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~ 378 (594)
T 2p1m_B 300 TVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVL 378 (594)
T ss_dssp CCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEE
T ss_pred CCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHH
Confidence 5443211 12345555666666555 22 1112222235555555552 233332111 1233444443
Q ss_pred hhhccCCCCCCcccc-CCCCCCeeeec--C----CcCcc-----ccchhhhhcccccceEEccCccccccCchhhhc-cc
Q 041467 284 YLFNNLQGNIPSSLA-NCKSLLGLSVS--H----NKLTS-----TLPQQILSVTTLSLYLELDNNLLNGSLPPEVGN-LK 350 (746)
Q Consensus 284 ~l~n~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~-----~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~-l~ 350 (746)
...|++++..+..+. .+++|+.|+++ + |.+++ .++..+..+++| +.|++++ .+++..+..++. ++
T Consensus 379 ~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L-~~L~L~~-~l~~~~~~~l~~~~~ 456 (594)
T 2p1m_B 379 YFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDL-RRLSLSG-LLTDKVFEYIGTYAK 456 (594)
T ss_dssp EEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTC-CEEECCS-SCCHHHHHHHHHHCT
T ss_pred HhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCc-cEEeecC-cccHHHHHHHHHhch
Confidence 223444433333333 35555555555 3 34431 111223344455 3555544 444443444433 55
Q ss_pred CCceeecCCCC----------CCCCCCCEEEccCCcCcccCCC--CCccCCCCeeeEecCC
Q 041467 351 NLLRLHIPEYP----------ENLSFFELLNLSYNYFGSEVPT--KGVFNNKTRFSIIGNG 399 (746)
Q Consensus 351 ~L~~L~lp~~~----------~~l~~L~~L~ls~N~l~~~~p~--~~~~~~~~~~~~~~n~ 399 (746)
+|+.|++.... ..+++|+.|++++|.+++..+. ...+.++..+++.+|+
T Consensus 457 ~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 457 KMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp TCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred hccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 55555442211 2356778888888887543321 1234566677776664
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.4e-21 Score=201.13 Aligned_cols=194 Identities=19% Similarity=0.322 Sum_probs=138.2
Q ss_pred cCCCCCCEEeccCCCccc---ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCC
Q 041467 107 GHLKSLLLLSLAFNQFLS---LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCS 183 (746)
Q Consensus 107 ~~l~~L~~L~Ls~N~l~~---l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~ 183 (746)
.++++|+.|++++|.+.. +..+++|+.|+|++|++++..+ +..+++|++|+|++|.+++. ..+..++
T Consensus 38 ~~l~~L~~L~l~~~~i~~l~~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--------~~~~~l~ 107 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--------SAIAGLQ 107 (308)
T ss_dssp HHHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--------GGGTTCT
T ss_pred HHcCCcCEEEeeCCCccCchhhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--------hhhcCCC
Confidence 345566666777666643 4557788888888888876544 77888888888888887652 2467788
Q ss_pred CCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeec
Q 041467 184 KLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNI 263 (746)
Q Consensus 184 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 263 (746)
+|+.|++++|++++ +|. +..++ +|+.|++++|++++..+ ++.+++|++|++++|++.+..+ +..+++|+.|++
T Consensus 108 ~L~~L~l~~n~l~~-~~~-l~~l~-~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l 180 (308)
T 1h6u_A 108 SIKTLDLTSTQITD-VTP-LAGLS-NLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKA 180 (308)
T ss_dssp TCCEEECTTSCCCC-CGG-GTTCT-TCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCC-chh-hcCCC-CCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEEC
Confidence 88888888888875 343 66766 68888888888875433 7788888888888888875433 778888888888
Q ss_pred ccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCc
Q 041467 264 GGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLP 343 (746)
Q Consensus 264 s~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p 343 (746)
++|++++. +. +..+++|+.|+|++|++++ ++ .+..+++| +.|++++|++++ .|
T Consensus 181 ~~n~l~~~----------------------~~-l~~l~~L~~L~L~~N~l~~-~~-~l~~l~~L-~~L~l~~N~i~~-~~ 233 (308)
T 1h6u_A 181 DDNKISDI----------------------SP-LASLPNLIEVHLKNNQISD-VS-PLANTSNL-FIVTLTNQTITN-QP 233 (308)
T ss_dssp CSSCCCCC----------------------GG-GGGCTTCCEEECTTSCCCB-CG-GGTTCTTC-CEEEEEEEEEEC-CC
T ss_pred CCCccCcC----------------------hh-hcCCCCCCEEEccCCccCc-cc-cccCCCCC-CEEEccCCeeec-CC
Confidence 88877632 11 5667788888888888875 33 26777777 578888888863 44
Q ss_pred h
Q 041467 344 P 344 (746)
Q Consensus 344 ~ 344 (746)
.
T Consensus 234 ~ 234 (308)
T 1h6u_A 234 V 234 (308)
T ss_dssp E
T ss_pred e
Confidence 3
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-23 Score=239.47 Aligned_cols=349 Identities=18% Similarity=0.132 Sum_probs=148.8
Q ss_pred cccccEEecccCcCcccCchhhh-CCccCcEEecccC-cCCcc-CCccccCCCCCCeeeCcCCCCCCccchhh----cCC
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIG-RLISLERLILSNN-SFSCA-IPANLSSGSNLIKLSTDSNNLVRDILTEI----CSL 89 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~----~~l 89 (746)
+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+.+..+..+ ..+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 34555555555555544444443 4555555555555 33321 23333345555555555555433322222 234
Q ss_pred CCCCEEEccCCC-Cc--C----cccCCCCCCEEeccCC-Ccc----cccCCCCCcEeeCc-------cCcccccCCcccc
Q 041467 90 FKLERLRIDCGG-RI--D----SLGHLKSLLLLSLAFN-QFL----SLSNASSLEMIEFS-------RNQFSGGVSVDFS 150 (746)
Q Consensus 90 ~~L~~L~l~~~~-~~--~----~~~~l~~L~~L~Ls~N-~l~----~l~~l~~L~~L~Ls-------~N~l~~~~~~~~~ 150 (746)
++|+.|+++.+. .+ . .+.++++|+.|+|++| .+. .+..+++|+.|+++ .|.+.+. +..+.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l-~~~l~ 262 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGL-SVALS 262 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHH-HHHHH
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHH-HHHHh
Confidence 455555555443 11 0 1123455555555555 221 12344555555532 2223322 22445
Q ss_pred CCCCCCEE-EccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChh-hhhcccccceEEcccCcccc-cCCcc
Q 041467 151 RLKNLSWL-NLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHS-IANLSSTIKQIAMGSNRISS-TIPHG 227 (746)
Q Consensus 151 ~l~~L~~L-~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~~L~~L~l~~N~i~~-~~p~~ 227 (746)
++++|+.| .+...... .++..+..+++|+.|+|++|.+++..... +..++ +|+.|++++| ++. .++..
T Consensus 263 ~~~~L~~Ls~~~~~~~~-------~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~-~L~~L~l~~~-~~~~~l~~l 333 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVPA-------YLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCP-KLQRLWVLDY-IEDAGLEVL 333 (594)
T ss_dssp TCTTCCEEECCBTCCGG-------GGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCT-TCCEEEEEGG-GHHHHHHHH
T ss_pred cCCCcccccCCcccchh-------hHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCC-CcCEEeCcCc-cCHHHHHHH
Confidence 55555555 22211110 22333334455555555555544322111 22333 4555555555 221 11112
Q ss_pred ccCCCCCCeeeccc---------ccceecCCcCC-CCCCCCceeecccccccccccc----cccccChHHhh--h----c
Q 041467 228 IRNLVNLNWLTMES---------SQLIGTIPPLI-GETPNLQLLNIGGNHLQGSILS----SLGNLTLQTYL--F----N 287 (746)
Q Consensus 228 ~~~l~~L~~L~L~~---------N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~----~l~~l~~l~~l--~----n 287 (746)
...+++|++|+++. +.+++.....+ ..+++|+.|+++.|.+++..+. .+.+|+.+++. + +
T Consensus 334 ~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~ 413 (594)
T 2p1m_B 334 ASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPD 413 (594)
T ss_dssp HHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCC
T ss_pred HHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcc
Confidence 22355555555522 22221111111 1245555555555555543222 12334444333 1 2
Q ss_pred cCCCC-----CCccccCCCCCCeeeecCCcCccccchhhhh-cccccceEEccCccccccCchhh-hcccCCceeecCCC
Q 041467 288 NLQGN-----IPSSLANCKSLLGLSVSHNKLTSTLPQQILS-VTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLHIPEY 360 (746)
Q Consensus 288 ~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~l~~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~lp~~ 360 (746)
++++. ++..+..+++|+.|+|++ .+++..+..+.. +++| +.|+|++|.+++..+..+ ..+++|+.|++...
T Consensus 414 ~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L-~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n 491 (594)
T 2p1m_B 414 YLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKM-EMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDC 491 (594)
T ss_dssp TTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTC-CEEEEESCCSSHHHHHHHHHHCTTCCEEEEESC
T ss_pred cccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhc-cEeeccCCCCcHHHHHHHHhcCCCcCEEECcCC
Confidence 23211 111234455555555554 444443444443 4444 455555555544333333 44555555544221
Q ss_pred ----------CCCCCCCCEEEccCCcC
Q 041467 361 ----------PENLSFFELLNLSYNYF 377 (746)
Q Consensus 361 ----------~~~l~~L~~L~ls~N~l 377 (746)
...+++|+.|++++|++
T Consensus 492 ~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 492 PFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp SCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred CCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 12344555555555555
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.2e-21 Score=213.31 Aligned_cols=94 Identities=20% Similarity=0.311 Sum_probs=43.7
Q ss_pred CCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhccc
Q 041467 129 SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSS 208 (746)
Q Consensus 129 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 208 (746)
++|+.|+|++|+|++ +|. |.. +|++|+|++|.|++ +|. .+++|+.|+|++|.|++ +|. .++
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-------lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~- 160 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-------LPE---LPALLEYINADNNQLTM-LPE---LPT- 160 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-------CCC---CCTTCCEEECCSSCCSC-CCC---CCT-
T ss_pred CCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-------CCC---cCccccEEeCCCCccCc-CCC---cCC-
Confidence 444555555555554 333 333 55555555555543 111 24455555555555543 333 122
Q ss_pred ccceEEcccCcccccCCccccCCCCCCeeecccccce
Q 041467 209 TIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLI 245 (746)
Q Consensus 209 ~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~ 245 (746)
+|+.|++++|+|++ +|. |. ++|+.|+|++|+++
T Consensus 161 ~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 161 SLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp TCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS
T ss_pred CcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC
Confidence 45555555555543 343 33 44555555555444
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.3e-20 Score=181.27 Aligned_cols=179 Identities=17% Similarity=0.182 Sum_probs=144.4
Q ss_pred CEEeccCCCccccc--CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEc
Q 041467 113 LLLSLAFNQFLSLS--NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYF 190 (746)
Q Consensus 113 ~~L~Ls~N~l~~l~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~L 190 (746)
+.++++.+.+..++ -.++|++|++++|++++..+..|..+++|++|+|++|+++..+ +..|..+++|++|+|
T Consensus 10 ~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------~~~~~~l~~L~~L~L 83 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLP------NGVFNKLTSLTYLNL 83 (208)
T ss_dssp TEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC------TTTTTTCTTCCEEEC
T ss_pred CEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccC------hhhcCCCCCcCEEEC
Confidence 45667777775554 2568999999999999888888999999999999999998632 345788999999999
Q ss_pred ccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccc
Q 041467 191 NRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 191 s~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
++|++++..+..+..+. +|++|++++|+|++..+..|.++++|++|+|++|++.+..+..|..+++|+.|++++|.+.+
T Consensus 84 s~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 84 STNQLQSLPNGVFDKLT-QLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCcCCccCHhHhcCcc-CCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 99999976666678887 79999999999998777778999999999999999998777778999999999999998875
Q ss_pred cccccccccChHHhhhccCCCCCCccccCCCC
Q 041467 271 SILSSLGNLTLQTYLFNNLQGNIPSSLANCKS 302 (746)
Q Consensus 271 ~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~ 302 (746)
.. ..++.+....|+++|.+|.+++.++.
T Consensus 163 ~~----~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 TC----PGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CT----TTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CC----CCHHHHHHHHHhCCceeeccCccccC
Confidence 33 24555555566666666666665543
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.3e-20 Score=181.90 Aligned_cols=179 Identities=19% Similarity=0.192 Sum_probs=94.3
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccC
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 99 (746)
-+.++.+++.++ .+|..+ .++|++|+|++|++++..+..|.++++|++|++++|++.+..+..+
T Consensus 9 ~~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~------------- 72 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVF------------- 72 (208)
T ss_dssp TTEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT-------------
T ss_pred CCEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhc-------------
Confidence 357788888886 566544 3578888888888886666667778888888888777653322222
Q ss_pred CCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccc
Q 041467 100 GGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLL 179 (746)
Q Consensus 100 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 179 (746)
.++++|++|+|++|++++..+..|..+++|++|+|++|.+++.+ +..|
T Consensus 73 --------------------------~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~------~~~~ 120 (208)
T 2o6s_A 73 --------------------------NKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLP------DGVF 120 (208)
T ss_dssp --------------------------TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC------TTTT
T ss_pred --------------------------CCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccC------HhHh
Confidence 22334444444455555444444555555555555555554321 1223
Q ss_pred cCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCC
Q 041467 180 TNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE 254 (746)
Q Consensus 180 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 254 (746)
..+++|+.|+|++|++++..+..+..+. +|+.|++++|.+.+ .+++|++|+++.|+++|.+|..++.
T Consensus 121 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 121 DKLTQLKDLRLYQNQLKSVPDGVFDRLT-SLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCT-TCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred ccCCcCCEEECCCCccceeCHHHhccCC-CccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcc
Confidence 4444555555555544433333333333 34444444443332 2223444444444444444444443
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.82 E-value=7e-20 Score=206.12 Aligned_cols=194 Identities=20% Similarity=0.295 Sum_probs=147.9
Q ss_pred CCCEEeccCCCcccccC--CCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEE
Q 041467 111 SLLLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188 (746)
Q Consensus 111 ~L~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L 188 (746)
+|+.|+|++|++..++. .++|+.|+|++|+|+ .+| ..+++|++|+|++|.|+++ |. +.+ +|+.|
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~i-------p~-l~~--~L~~L 125 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLPPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTL-------PE-LPA--SLKHL 125 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCCTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCC-------CC-CCT--TCCEE
T ss_pred CccEEEeCCCCCCccCHhHcCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCc-------ch-hhc--CCCEE
Confidence 67788888888765542 468999999999998 455 4578999999999998862 33 333 89999
Q ss_pred EcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccc
Q 041467 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL 268 (746)
Q Consensus 189 ~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 268 (746)
+|++|+|++ +|. .++ +|+.|++++|+|++ +|. .+++|++|+|++|++++ +|. |. ++|+.|+|++|+|
T Consensus 126 ~Ls~N~l~~-lp~---~l~-~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L 192 (571)
T 3cvr_A 126 DVDNNQLTM-LPE---LPA-LLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLL 192 (571)
T ss_dssp ECCSSCCSC-CCC---CCT-TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCC
T ss_pred ECCCCcCCC-CCC---cCc-cccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCC
Confidence 999999986 666 344 79999999999986 665 57889999999999886 666 65 8899999999988
Q ss_pred cccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhc
Q 041467 269 QGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGN 348 (746)
Q Consensus 269 ~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~ 348 (746)
+ .+|. +.. . -+.....|+.|+|++|+|+ .+|..++.++++ ..|+|++|++++.+|..++.
T Consensus 193 ~-~lp~-~~~--~--------------L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L-~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 193 E-SLPA-VPV--R--------------NHHSEETEIFFRCRENRIT-HIPENILSLDPT-CTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp S-SCCC-CC------------------------CCEEEECCSSCCC-CCCGGGGGSCTT-EEEECCSSSCCHHHHHHHHH
T ss_pred C-chhh-HHH--h--------------hhcccccceEEecCCCcce-ecCHHHhcCCCC-CEEEeeCCcCCCcCHHHHHH
Confidence 8 3332 211 0 0122234599999999998 689999999998 68999999999999999887
Q ss_pred ccC
Q 041467 349 LKN 351 (746)
Q Consensus 349 l~~ 351 (746)
+..
T Consensus 253 l~~ 255 (571)
T 3cvr_A 253 QTA 255 (571)
T ss_dssp HHH
T ss_pred hhc
Confidence 654
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.81 E-value=8.2e-20 Score=195.19 Aligned_cols=200 Identities=13% Similarity=0.101 Sum_probs=140.7
Q ss_pred CEEeccCCCcccccC-C-CCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCE-EE
Q 041467 113 LLLSLAFNQFLSLSN-A-SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLER-LY 189 (746)
Q Consensus 113 ~~L~Ls~N~l~~l~~-l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~-L~ 189 (746)
++++.++|++++++. + +++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.. -+..|.++++|.. +.
T Consensus 12 ~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i-----~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 12 RVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI-----EADVFSNLPKLHEIRI 86 (350)
T ss_dssp TEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEE-----CTTSBCSCTTCCEEEE
T ss_pred CEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCcc-----ChhHhhcchhhhhhhc
Confidence 467778888877653 3 57899999999999877788999999999999999875411 1245778888765 66
Q ss_pred cccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccc-ccceecCCcCCCCCC-CCceeeccccc
Q 041467 190 FNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMES-SQLIGTIPPLIGETP-NLQLLNIGGNH 267 (746)
Q Consensus 190 Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~ 267 (746)
++.|++++..|..|..++ +|++|++++|+|++..+..+....++..|++.+ |++....+..|..+. .++.|+|++|+
T Consensus 87 ~~~N~l~~l~~~~f~~l~-~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLP-NLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EEETTCCEECTTSBCCCT-TCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC
T ss_pred ccCCcccccCchhhhhcc-ccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccc
Confidence 677888877788888887 799999999999876666777777888888865 566655566777765 68889999999
Q ss_pred ccccccccccc--cChHHhhh-ccCCCCCCccccCCCCCCeeeecCCcCccccch
Q 041467 268 LQGSILSSLGN--LTLQTYLF-NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQ 319 (746)
Q Consensus 268 l~~~~~~~l~~--l~~l~~l~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 319 (746)
|+...+..+.. +..+.+.. |.+....++.|.++++|++|||++|+|+ .+|.
T Consensus 166 i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~ 219 (350)
T 4ay9_X 166 IQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPS 219 (350)
T ss_dssp CCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCS
T ss_pred ccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccCh
Confidence 88544433322 23333333 3333333345666666666666666666 3443
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=206.60 Aligned_cols=188 Identities=23% Similarity=0.313 Sum_probs=106.6
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
+..+..++|+.+.+....+ +..|.+|+.|+|++|.|.. +| .|..+++|+.|+|++|.+.+..+ +..+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l------- 86 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNL------- 86 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGC-------
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccC-------
Confidence 3456777888888875444 5678889999999999874 44 58888899999998888755433 3333
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCc
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANEL 173 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 173 (746)
++|+.|+|++|++. .+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.|++.
T Consensus 87 -------------~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l----- 146 (605)
T 1m9s_A 87 -------------KNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI----- 146 (605)
T ss_dssp -------------TTCCEEECCSSCCCCCTTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-----
T ss_pred -------------CCCCEEECcCCCCCCChhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc-----
Confidence 33333333444332 233445555555555555532 2355555555555555555431
Q ss_pred cccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccce
Q 041467 174 DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLI 245 (746)
Q Consensus 174 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~ 245 (746)
..+..+++|+.|+|++|.+++..| +..++ +|+.|+|++|+|++ + ..+..+++|+.|+|++|.+.
T Consensus 147 ---~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~-~L~~L~Ls~N~i~~-l-~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 147 ---TVLSRLTKLDTLSLEDNQISDIVP--LAGLT-KLQNLYLSKNHISD-L-RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp ---GGGGSCTTCSEEECCSSCCCCCGG--GTTCT-TCCEEECCSSCCCB-C-GGGTTCTTCSEEECCSEEEE
T ss_pred ---hhhcccCCCCEEECcCCcCCCchh--hccCC-CCCEEECcCCCCCC-C-hHHccCCCCCEEEccCCcCc
Confidence 234455555555555555554333 44443 45555555555543 2 23444455555555555444
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.2e-22 Score=226.38 Aligned_cols=203 Identities=17% Similarity=0.180 Sum_probs=114.0
Q ss_pred CCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCC-------------CCCccchhhcCCCCCCEEE-ccCCCCcCc
Q 041467 40 RLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN-------------LVRDILTEICSLFKLERLR-IDCGGRIDS 105 (746)
Q Consensus 40 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-l~~~~~~~~ 105 (746)
.+++|+.|+|++|+|+ .+|..++++++|+.|++++|. ..+..|..++.+++|+.|+ ++.+
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n----- 420 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAA----- 420 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHH-----
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhc-----
Confidence 3445555555555554 455555555555555554432 3344555555555555554 2221
Q ss_pred ccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCC
Q 041467 106 LGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKL 185 (746)
Q Consensus 106 ~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L 185 (746)
.+.+|..+.++.|.+..+.. ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|.|+. +|..++++++|
T Consensus 421 --~~~~L~~l~l~~n~i~~l~~-~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~-------lp~~~~~l~~L 488 (567)
T 1dce_A 421 --YLDDLRSKFLLENSVLKMEY-ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRA-------LPPALAALRCL 488 (567)
T ss_dssp --HHHHHHHHHHHHHHHHHHHH-TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCC-------CCGGGGGCTTC
T ss_pred --ccchhhhhhhhcccccccCc-cCceEEEecCCCCCC-CcC-ccccccCcEeecCcccccc-------cchhhhcCCCC
Confidence 12234444445555544332 246667777777765 343 6666777777777776653 44556666667
Q ss_pred CEEEcccccccccCChhhhhcccccceEEcccCcccccC-CccccCCCCCCeeecccccceecCCcC---CCCCCCCcee
Q 041467 186 ERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTI-PHGIRNLVNLNWLTMESSQLIGTIPPL---IGETPNLQLL 261 (746)
Q Consensus 186 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~L~~L 261 (746)
+.|+|++|+|++ +| .++.++ +|+.|+|++|+|++.. |..|+.+++|+.|+|++|.+++.+|.. +..+++|+.|
T Consensus 489 ~~L~Ls~N~l~~-lp-~l~~l~-~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L 565 (567)
T 1dce_A 489 EVLQASDNALEN-VD-GVANLP-RLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 565 (567)
T ss_dssp CEEECCSSCCCC-CG-GGTTCS-SCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred CEEECCCCCCCC-Cc-ccCCCC-CCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCcc
Confidence 777777776664 45 566665 5666666666666654 666666666666666666666544321 1225666666
Q ss_pred ec
Q 041467 262 NI 263 (746)
Q Consensus 262 ~L 263 (746)
++
T Consensus 566 ~l 567 (567)
T 1dce_A 566 LT 567 (567)
T ss_dssp EC
T ss_pred CC
Confidence 43
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.79 E-value=5.2e-19 Score=183.62 Aligned_cols=168 Identities=23% Similarity=0.382 Sum_probs=104.4
Q ss_pred cCCCCCCEEeccCCCccc---ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCC
Q 041467 107 GHLKSLLLLSLAFNQFLS---LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCS 183 (746)
Q Consensus 107 ~~l~~L~~L~Ls~N~l~~---l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~ 183 (746)
..+++|+.|++++|.+.. +..+++|+.|+|++|++++..+ +..+++|++|+|++|.++. + ..+..++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-------~-~~l~~l~ 112 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-------L-SSLKDLK 112 (291)
T ss_dssp HHHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-------G-GGGTTCT
T ss_pred hhcCcccEEEccCCCcccChhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-------C-hhhccCC
Confidence 345556666666666533 3456677777777777765444 6677777777777777654 2 2366667
Q ss_pred CCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeec
Q 041467 184 KLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNI 263 (746)
Q Consensus 184 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 263 (746)
+|++|++++|++++ + ..+..++ +|+.|++++|++++. ..+..+++|++|++++|++.+..| +..+++|+.|+|
T Consensus 113 ~L~~L~L~~n~i~~-~-~~l~~l~-~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L 185 (291)
T 1h6t_A 113 KLKSLSLEHNGISD-I-NGLVHLP-QLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 185 (291)
T ss_dssp TCCEEECTTSCCCC-C-GGGGGCT-TCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCC-C-hhhcCCC-CCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEEC
Confidence 77777777777664 2 3455555 577777777776653 456666667777777666665433 666666666666
Q ss_pred ccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCc
Q 041467 264 GGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT 314 (746)
Q Consensus 264 s~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 314 (746)
++|.+++ +| .+..+++|+.|++++|+++
T Consensus 186 ~~N~i~~----------------------l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 186 SKNHISD----------------------LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CSSCCCB----------------------CG-GGTTCTTCSEEEEEEEEEE
T ss_pred CCCcCCC----------------------Ch-hhccCCCCCEEECcCCccc
Confidence 6666652 12 2455666666666666665
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-18 Score=179.98 Aligned_cols=167 Identities=26% Similarity=0.333 Sum_probs=103.3
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
+++|++|++++|.+. .+| .+..+++|++|+|++|++++..| +.++++|+.|+|++|.+.+ +
T Consensus 45 l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-------------- 105 (291)
T 1h6t_A 45 LNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-------------- 105 (291)
T ss_dssp HHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G--------------
T ss_pred cCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C--------------
Confidence 344555555555554 222 24555555555555555553222 5555555555555555432 1
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCc
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANEL 173 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 173 (746)
..+..+++|+.|+|++|++. .+..+++|+.|++++|++++. ..+..+++|++|+|++|.+++
T Consensus 106 -------~~l~~l~~L~~L~L~~n~i~~~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~------ 170 (291)
T 1h6t_A 106 -------SSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD------ 170 (291)
T ss_dssp -------GGGTTCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC------
T ss_pred -------hhhccCCCCCEEECCCCcCCCChhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc------
Confidence 23556666666666666663 345677777888888877764 467777888888888887765
Q ss_pred cccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccc
Q 041467 174 DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISS 222 (746)
Q Consensus 174 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~ 222 (746)
.+. +..+++|+.|++++|.+++ +| .+..++ +|+.|++++|+++.
T Consensus 171 -~~~-l~~l~~L~~L~L~~N~i~~-l~-~l~~l~-~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 171 -IVP-LAGLTKLQNLYLSKNHISD-LR-ALAGLK-NLDVLELFSQECLN 214 (291)
T ss_dssp -CGG-GTTCTTCCEEECCSSCCCB-CG-GGTTCT-TCSEEEEEEEEEEC
T ss_pred -chh-hcCCCccCEEECCCCcCCC-Ch-hhccCC-CCCEEECcCCcccC
Confidence 222 6777788888888887774 44 366666 68888888887764
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-21 Score=220.50 Aligned_cols=186 Identities=18% Similarity=0.220 Sum_probs=155.2
Q ss_pred cCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCC-----------------CcCcccCCCCCCEEe-ccCCCccc
Q 041467 63 SSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGG-----------------RIDSLGHLKSLLLLS-LAFNQFLS 124 (746)
Q Consensus 63 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~-----------------~~~~~~~l~~L~~L~-Ls~N~l~~ 124 (746)
..+++|+.|+|++|.+ +.+|..++++++|+.|+++++. .+..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L-~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKS-TVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHH-HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhH-HhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 6789999999999998 5789999999999999986542 113456667777776 565544
Q ss_pred ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhh
Q 041467 125 LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIA 204 (746)
Q Consensus 125 l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 204 (746)
.+|..+.+++|.|+...+ ..|+.|+|++|.|++ +|. ++.+++|+.|+|++|+|+ .+|..++
T Consensus 423 ----~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-------lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 423 ----DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-------LCH-LEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp ----HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-------CCC-GGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred ----chhhhhhhhcccccccCc------cCceEEEecCCCCCC-------CcC-ccccccCcEeecCccccc-ccchhhh
Confidence 345566777888775433 259999999999986 444 788999999999999998 8899999
Q ss_pred hcccccceEEcccCcccccCCccccCCCCCCeeecccccceecC-CcCCCCCCCCceeeccccccccccc
Q 041467 205 NLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI-PPLIGETPNLQLLNIGGNHLQGSIL 273 (746)
Q Consensus 205 ~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~ 273 (746)
.++ +|+.|+|++|+|++ +| .|+++++|+.|+|++|++++.. |..++.+++|+.|+|++|.+++.++
T Consensus 484 ~l~-~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 484 ALR-CLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp GCT-TCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred cCC-CCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 998 79999999999997 67 8999999999999999999887 9999999999999999999986543
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.2e-18 Score=171.08 Aligned_cols=152 Identities=16% Similarity=0.219 Sum_probs=135.7
Q ss_pred CEEeccCCCcccccC--CCCCcEeeCccCcccccCC-ccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEE
Q 041467 113 LLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVS-VDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLY 189 (746)
Q Consensus 113 ~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~ 189 (746)
+.+++++|.+..++. ...++.|+|++|+|++..+ ..|..+++|++|+|++|.|++. .+..|.++++|++|+
T Consensus 14 ~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i------~~~~~~~l~~L~~L~ 87 (220)
T 2v70_A 14 TTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI------EEGAFEGASGVNEIL 87 (220)
T ss_dssp TEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEE------CTTTTTTCTTCCEEE
T ss_pred CEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEE------CHHHhCCCCCCCEEE
Confidence 578899999877653 3578999999999998855 5689999999999999999873 344688999999999
Q ss_pred cccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 190 FNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 190 Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
|++|++++..|..|..+. +|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+.
T Consensus 88 Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 88 LTSNRLENVQHKMFKGLE-SLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCSSCCCCCCGGGGTTCS-SCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CCCCccCccCHhHhcCCc-CCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 999999988888888887 7999999999999988999999999999999999999988999999999999999999998
Q ss_pred cc
Q 041467 270 GS 271 (746)
Q Consensus 270 ~~ 271 (746)
+.
T Consensus 167 c~ 168 (220)
T 2v70_A 167 CN 168 (220)
T ss_dssp CS
T ss_pred CC
Confidence 54
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2.9e-18 Score=195.07 Aligned_cols=169 Identities=25% Similarity=0.286 Sum_probs=125.6
Q ss_pred cccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 15 ILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
..+++|+.|+|++|.+. .+| .|..+++|+.|+|++|+|++..| +..+++|+.|+|++|.+.+ +| .+.
T Consensus 40 ~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~------- 106 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLK------- 106 (605)
T ss_dssp HHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TST-------
T ss_pred hcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhc-------
Confidence 44789999999999997 455 59999999999999999997544 9999999999999999854 22 344
Q ss_pred EEccCCCCcCcccCCCCCCEEeccCCCcc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCC
Q 041467 95 LRIDCGGRIDSLGHLKSLLLLSLAFNQFL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171 (746)
Q Consensus 95 L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 171 (746)
.+++|+.|+|++|++. .+..+++|+.|+|++|+|++. ..|..+++|+.|+|++|.|++.
T Consensus 107 -------------~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~--- 168 (605)
T 1m9s_A 107 -------------DLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI--- 168 (605)
T ss_dssp -------------TCTTCCEEECTTSCCCCCGGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCC---
T ss_pred -------------cCCCCCEEEecCCCCCCCccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCc---
Confidence 4455555555555553 345667777777777777754 4677777888888888877652
Q ss_pred CccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccc
Q 041467 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISS 222 (746)
Q Consensus 172 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~ 222 (746)
.| +..+++|+.|+|++|.|++ +| .+..++ +|+.|+|++|.+++
T Consensus 169 ---~~--l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~-~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 169 ---VP--LAGLTKLQNLYLSKNHISD-LR-ALAGLK-NLDVLELFSQECLN 211 (605)
T ss_dssp ---GG--GTTCTTCCEEECCSSCCCB-CG-GGTTCT-TCSEEECCSEEEEC
T ss_pred ---hh--hccCCCCCEEECcCCCCCC-Ch-HHccCC-CCCEEEccCCcCcC
Confidence 22 6777788888888887774 33 466666 68888888887775
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.7e-18 Score=184.12 Aligned_cols=181 Identities=17% Similarity=0.203 Sum_probs=122.4
Q ss_pred cEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccccccc-CCCCCCEEEcccccccccCChhhhhccccc
Q 041467 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLT-NCSKLERLYFNRNGFEGVLPHSIANLSSTI 210 (746)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L 210 (746)
+.+++++|+++. +|..+. +.++.|+|++|+|++.. +..+. ++++|+.|+|++|+|++..|..|..+. +|
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~------~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~-~L 90 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLR------AEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVP-NL 90 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEEC------TTSSSSCCTTCCEEECCSSCCCEECTTTTTTCT-TC
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccC------hhhhhhcccccCEEECCCCcCCccChhhccCCC-CC
Confidence 456666666664 343332 34677777777776522 23344 677777777777777766666677776 68
Q ss_pred ceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCC
Q 041467 211 KQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQ 290 (746)
Q Consensus 211 ~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~ 290 (746)
++|+|++|+|++..+..|.++++|++|+|++|++.+..|..|.++++|+.|+|++|+|++..+..+.
T Consensus 91 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~------------- 157 (361)
T 2xot_A 91 RYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIK------------- 157 (361)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC-------------
T ss_pred CEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhc-------------
Confidence 8888888888776666788888888888888888877788888888888888888887732211110
Q ss_pred CCCCccccCCCCCCeeeecCCcCccccchhhhhcccc-cceEEccCccccc
Q 041467 291 GNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTL-SLYLELDNNLLNG 340 (746)
Q Consensus 291 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~~~L~Ls~N~l~~ 340 (746)
.+..+++|+.|+|++|+|++..+..+..+..+ +..|+|++|++..
T Consensus 158 -----~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 158 -----DGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp ---------CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred -----CcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 01467788888888888885444566666653 2468888888864
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3.5e-18 Score=169.57 Aligned_cols=151 Identities=15% Similarity=0.184 Sum_probs=134.6
Q ss_pred CEEeccCCCcccccC--CCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEc
Q 041467 113 LLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYF 190 (746)
Q Consensus 113 ~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~L 190 (746)
+.+++++|.+..++. .++|+.|+|++|+|++..+..|..+++|++|+|++|.+++ ..|..|.++++|++|+|
T Consensus 14 ~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~------~~~~~~~~l~~L~~L~L 87 (220)
T 2v9t_B 14 NIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISE------LAPDAFQGLRSLNSLVL 87 (220)
T ss_dssp TEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCE------ECTTTTTTCSSCCEEEC
T ss_pred CEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCC------cCHHHhhCCcCCCEEEC
Confidence 567888888876653 3589999999999999888899999999999999999987 34677899999999999
Q ss_pred ccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccc
Q 041467 191 NRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 191 s~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
++|+|++..+..|..+. +|+.|+|++|+|++..|..|.++++|++|+|++|++.+..+..|..+++|+.|+|++|.+..
T Consensus 88 s~N~l~~l~~~~f~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 88 YGNKITELPKSLFEGLF-SLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCcCCccCHhHccCCC-CCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 99999966555677787 79999999999999889999999999999999999998888889999999999999999874
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.8e-18 Score=184.01 Aligned_cols=175 Identities=22% Similarity=0.237 Sum_probs=146.4
Q ss_pred CEEeccCCCcccccC--CCCCcEeeCccCcccccCCcccc-CCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEE
Q 041467 113 LLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVSVDFS-RLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLY 189 (746)
Q Consensus 113 ~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~ 189 (746)
+.+++++|++..++. ...++.|+|++|+|++..+..|. ++++|++|+|++|+|++. .+..|.++++|++|+
T Consensus 21 ~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i------~~~~~~~l~~L~~L~ 94 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFI------SSEAFVPVPNLRYLD 94 (361)
T ss_dssp TEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEE------CTTTTTTCTTCCEEE
T ss_pred CEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCcc------ChhhccCCCCCCEEE
Confidence 578899998877753 35689999999999999888888 999999999999999873 345688999999999
Q ss_pred cccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCC---CCCCCCceeecccc
Q 041467 190 FNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLI---GETPNLQLLNIGGN 266 (746)
Q Consensus 190 Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~Ls~N 266 (746)
|++|+|++..+..|..+. +|+.|+|++|+|++..|..|.++++|+.|+|++|++.+..+..| ..+++|+.|+|++|
T Consensus 95 Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N 173 (361)
T 2xot_A 95 LSSNHLHTLDEFLFSDLQ-ALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSN 173 (361)
T ss_dssp CCSSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSS
T ss_pred CCCCcCCcCCHHHhCCCc-CCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCC
Confidence 999999987777888887 79999999999999889999999999999999999986555555 67999999999999
Q ss_pred cccccccccccccChHHhhhccCCCCCCccccCCCC--CCeeeecCCcCcc
Q 041467 267 HLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKS--LLGLSVSHNKLTS 315 (746)
Q Consensus 267 ~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~ 315 (746)
+|++..+..+ ..++. |+.|+|++|.+.-
T Consensus 174 ~l~~l~~~~~---------------------~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 174 KLKKLPLTDL---------------------QKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCCCCCHHHH---------------------HHSCHHHHTTEECCSSCEEC
T ss_pred CCCccCHHHh---------------------hhccHhhcceEEecCCCccC
Confidence 9985443333 33333 4789999999873
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.5e-18 Score=167.69 Aligned_cols=152 Identities=20% Similarity=0.217 Sum_probs=80.5
Q ss_pred cEEecccCcCcccCchhhhCCccCcEEecccCcCCccCC-ccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccC
Q 041467 21 RYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIP-ANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99 (746)
Q Consensus 21 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 99 (746)
+.+++++|.++ .+|..+. ..+++|+|++|+|++..| ..|.++++|+.|+|++|.+.+..+..
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~-------------- 76 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGA-------------- 76 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTT--------------
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHH--------------
Confidence 47777777776 4665543 345677777777765433 33556666666666666553322221
Q ss_pred CCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccc
Q 041467 100 GGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLL 179 (746)
Q Consensus 100 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 179 (746)
|.++++|++|+|++|+|++..+..|..+++|++|+|++|.|++ ..+..|
T Consensus 77 -------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~------~~~~~~ 125 (220)
T 2v70_A 77 -------------------------FEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITC------VGNDSF 125 (220)
T ss_dssp -------------------------TTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCC------BCTTSS
T ss_pred -------------------------hCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCe------ECHhHc
Confidence 2233445555555566655555555555555555555555554 123334
Q ss_pred cCCCCCCEEEcccccccccCChhhhhcccccceEEcccCccc
Q 041467 180 TNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRIS 221 (746)
Q Consensus 180 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~ 221 (746)
.++++|+.|+|++|++++..|..|..+. +|+.|++++|.++
T Consensus 126 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 166 (220)
T 2v70_A 126 IGLSSVRLLSLYDNQITTVAPGAFDTLH-SLSTLNLLANPFN 166 (220)
T ss_dssp TTCTTCSEEECTTSCCCCBCTTTTTTCT-TCCEEECCSCCEE
T ss_pred CCCccCCEEECCCCcCCEECHHHhcCCC-CCCEEEecCcCCc
Confidence 4455555555555555544444444443 3444444444444
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.8e-19 Score=179.39 Aligned_cols=82 Identities=16% Similarity=0.317 Sum_probs=40.3
Q ss_pred CCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceee
Q 041467 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLN 262 (746)
Q Consensus 183 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 262 (746)
++|+.|+|++|++++ +| .+..++ +|+.|++++|+|++. | .++.+++|++|+|++|++.+. ..+..+++|+.|+
T Consensus 106 ~~L~~L~L~~N~l~~-~~-~l~~l~-~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~ 178 (263)
T 1xeu_A 106 ACLSRLFLDNNELRD-TD-SLIHLK-NLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWID 178 (263)
T ss_dssp SSCCEEECCSSCCSB-SG-GGTTCT-TCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEE
T ss_pred CcccEEEccCCccCC-Ch-hhcCcc-cccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEe
Confidence 344444444444442 12 244443 345555555554432 2 345555555555555555543 4455566666666
Q ss_pred ccccccccc
Q 041467 263 IGGNHLQGS 271 (746)
Q Consensus 263 Ls~N~l~~~ 271 (746)
+++|.+++.
T Consensus 179 l~~N~~~~~ 187 (263)
T 1xeu_A 179 LTGQKCVNE 187 (263)
T ss_dssp EEEEEEECC
T ss_pred CCCCcccCC
Confidence 666665543
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-17 Score=165.76 Aligned_cols=152 Identities=14% Similarity=0.254 Sum_probs=103.6
Q ss_pred cEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccc
Q 041467 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIK 211 (746)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~ 211 (746)
+.+++++|.++. +|..+. ++|+.|+|++|.|+.. .+..|..+++|+.|+|++|++++..|..|..+. +|+
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i------~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~-~L~ 83 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVI------PPGAFSPYKKLRRIDLSNNQISELAPDAFQGLR-SLN 83 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEE------CTTSSTTCTTCCEEECCSSCCCEECTTTTTTCS-SCC
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCc------CHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCc-CCC
Confidence 567777777774 344333 5777777777777652 223566777777777777777766677777776 577
Q ss_pred eEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCC
Q 041467 212 QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQG 291 (746)
Q Consensus 212 ~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~ 291 (746)
+|+|++|+|+...+..|.++++|++|+|++|++.+..|..|..+++|++|+|++|+|++
T Consensus 84 ~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--------------------- 142 (220)
T 2v9t_B 84 SLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT--------------------- 142 (220)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC---------------------
T ss_pred EEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCE---------------------
Confidence 77777777775555556777777777777777777667777777777777777776663
Q ss_pred CCCccccCCCCCCeeeecCCcCc
Q 041467 292 NIPSSLANCKSLLGLSVSHNKLT 314 (746)
Q Consensus 292 ~~p~~~~~l~~L~~L~Ls~N~l~ 314 (746)
..+..|..+++|+.|+|++|.+.
T Consensus 143 ~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 143 IAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCTTTTTTCTTCCEEECCSSCEE
T ss_pred ECHHHHhCCCCCCEEEeCCCCcC
Confidence 22334556667777777777765
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.8e-17 Score=165.62 Aligned_cols=152 Identities=20% Similarity=0.268 Sum_probs=135.0
Q ss_pred CCEEeccCCCcccccC--CCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEE
Q 041467 112 LLLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLY 189 (746)
Q Consensus 112 L~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~ 189 (746)
-+.++++++++..++. .++|+.|+|++|+|++..|..|..+++|++|+|++|.|+..+ +..|..+++|+.|+
T Consensus 21 ~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~------~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALP------VGVFDSLTQLTVLD 94 (229)
T ss_dssp TTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC------TTTTTTCTTCCEEE
T ss_pred CCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcC------hhhcccCCCcCEEE
Confidence 5678888888877653 579999999999999999999999999999999999997633 34578899999999
Q ss_pred cccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 190 FNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 190 Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
|++|+|++..+..|..+. +|+.|++++|+|+ .+|..+..+++|+.|+|++|++.+..+..|..+++|+.|+|++|.+.
T Consensus 95 Ls~N~l~~l~~~~~~~l~-~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLV-HLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CCSSCCCCCCTTTTTTCT-TCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CCCCcCCccChhHhCcch-hhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 999999977777778887 7999999999999 68999999999999999999999877788999999999999999998
Q ss_pred cc
Q 041467 270 GS 271 (746)
Q Consensus 270 ~~ 271 (746)
..
T Consensus 173 c~ 174 (229)
T 3e6j_A 173 CE 174 (229)
T ss_dssp TT
T ss_pred CC
Confidence 54
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.9e-18 Score=200.01 Aligned_cols=161 Identities=20% Similarity=0.244 Sum_probs=117.2
Q ss_pred EeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccce
Q 041467 133 MIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQ 212 (746)
Q Consensus 133 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~ 212 (746)
.++++.|++. ..+..|..+++|+.|+|++|.+.. +|..+.++++|++|+|++|.|+ .+|..|+.+. +|+.
T Consensus 205 ~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~-------l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~-~L~~ 274 (727)
T 4b8c_D 205 EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIFN-------ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS-NLRV 274 (727)
T ss_dssp ------------------CCCCCCEEECTTSCCSC-------CCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT-TCCE
T ss_pred Ccccccccee-cChhhhccCCCCcEEECCCCCCCC-------CChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC-CCCE
Confidence 3344455555 568889999999999999999975 4555668999999999999998 8999999998 7999
Q ss_pred EEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccCh----HHhhhcc
Q 041467 213 IAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTL----QTYLFNN 288 (746)
Q Consensus 213 L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~----l~~l~n~ 288 (746)
|+|++|+|+ .+|..|++|++|++|+|++|.+. .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +.+.+|.
T Consensus 275 L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~ 352 (727)
T 4b8c_D 275 LDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNR 352 (727)
T ss_dssp EECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCc
Confidence 999999999 68999999999999999999997 78888999999999999999999988887765432 2334666
Q ss_pred CCCCCCccccCCCCCCeeeecCC
Q 041467 289 LQGNIPSSLANCKSLLGLSVSHN 311 (746)
Q Consensus 289 l~~~~p~~~~~l~~L~~L~Ls~N 311 (746)
+++.+|.. |..|++++|
T Consensus 353 l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 353 PEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp CCCCCCCC---------------
T ss_pred ccCcCccc------cceeEeecc
Confidence 66666653 334455555
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.3e-18 Score=173.88 Aligned_cols=166 Identities=20% Similarity=0.231 Sum_probs=103.8
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
+..+..+++++|.++ .++ .+..+++|++|++++|.|+ .+| .+..+++|+.|+|++|.+.+..+ +.++++|+.|+
T Consensus 18 l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 566888899999997 444 6888999999999999998 466 68889999999999998865433 66666665555
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcccc---cCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCc
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFLSL---SNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANEL 173 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 173 (746)
+++| ++..+ .. ++|+.|+|++|+|++. ..+..+++|++|+|++|++++.
T Consensus 92 L~~N--------------------~l~~l~~~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~----- 143 (263)
T 1xeu_A 92 VNRN--------------------RLKNLNGIPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI----- 143 (263)
T ss_dssp CCSS--------------------CCSCCTTCCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-----
T ss_pred CCCC--------------------ccCCcCcccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-----
Confidence 5554 33222 12 4555555555555542 2355555555555555555431
Q ss_pred cccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccc
Q 041467 174 DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISS 222 (746)
Q Consensus 174 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~ 222 (746)
+ .+..+++|+.|++++|++++. ..+..++ +|+.|++++|.+++
T Consensus 144 --~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~-~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 144 --V-MLGFLSKLEVLDLHGNEITNT--GGLTRLK-KVNWIDLTGQKCVN 186 (263)
T ss_dssp --G-GGGGCTTCCEEECTTSCCCBC--TTSTTCC-CCCEEEEEEEEEEC
T ss_pred --h-HHccCCCCCEEECCCCcCcch--HHhccCC-CCCEEeCCCCcccC
Confidence 1 344555555555555555543 3444444 45555555555553
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.73 E-value=7.1e-18 Score=164.40 Aligned_cols=130 Identities=18% Similarity=0.225 Sum_probs=66.6
Q ss_pred CCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcc
Q 041467 128 ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLS 207 (746)
Q Consensus 128 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 207 (746)
+++|+.|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|.+++..|..+..++
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--------~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 112 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--------YNPISGLSNLERLRIMGKDVTSDKIPNLSGLT 112 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--------CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCT
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--------chhhhcCCCCCEEEeECCccCcccChhhcCCC
Confidence 344555555555555 223 35555555666665554432 12345555555555555555544455555554
Q ss_pred cccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 208 STIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 208 ~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
+|++|++++|++++..|..|+.+++|++|++++|++.+.+| .+..+++|+.|++++|+++
T Consensus 113 -~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 113 -SLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp -TCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCC
T ss_pred -CCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCc
Confidence 45555555555554445555555555555555555222333 3455555555555555544
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.1e-17 Score=163.89 Aligned_cols=126 Identities=19% Similarity=0.269 Sum_probs=50.5
Q ss_pred cEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccc
Q 041467 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIK 211 (746)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~ 211 (746)
+.+++++++++. +|..+. ++|++|+|++|.+++. .+..|.++++|+.|+|++|+|++..+..|..++ +|+
T Consensus 22 ~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~------~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~-~L~ 91 (229)
T 3e6j_A 22 TTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKL------EPGVFDSLINLKELYLGSNQLGALPVGVFDSLT-QLT 91 (229)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCC------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCC
T ss_pred CEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCcc------CHHHhhCccCCcEEECCCCCCCCcChhhcccCC-CcC
Confidence 345555555442 222221 4444444444444431 122334444444444444444322222333333 344
Q ss_pred eEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccc
Q 041467 212 QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL 268 (746)
Q Consensus 212 ~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 268 (746)
.|+|++|+|++..+..|..+++|++|+|++|++. .+|..+..+++|++|+|++|+|
T Consensus 92 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l 147 (229)
T 3e6j_A 92 VLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQL 147 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCC
T ss_pred EEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcC
Confidence 4444444444333333344444444444444443 3333334444444444444433
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-18 Score=201.29 Aligned_cols=216 Identities=16% Similarity=0.144 Sum_probs=109.7
Q ss_pred cccccEEecccCcCcccCchhhhCCccCc-----EEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCC
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLE-----RLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFK 91 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 91 (746)
.+.++.|+|.+|.+.. .|..+.....|. .++++.|.+. ..|..|..+++|+.|+|++|.+. .+|..+.+
T Consensus 172 ~~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~--- 245 (727)
T 4b8c_D 172 TPLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFK--- 245 (727)
T ss_dssp ----------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG---
T ss_pred CCccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcC---
Confidence 3568899999999974 454443333322 2334445554 56888999999999999999985 56655444
Q ss_pred CCEEEccCCCCcCcccCCCCCCEEeccCCCcc----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCC
Q 041467 92 LERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167 (746)
Q Consensus 92 L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (746)
+++|+.|+|++|.|. .|.++++|++|+|++|+|+ .+|..|+.|++|++|+|++|.|+.
T Consensus 246 -----------------l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~ 307 (727)
T 4b8c_D 246 -----------------YDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTT 307 (727)
T ss_dssp -----------------CCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCC
T ss_pred -----------------CCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCc
Confidence 445555556666653 3567888999999999998 668889999999999999999974
Q ss_pred CCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccc-----
Q 041467 168 GTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS----- 242 (746)
Q Consensus 168 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N----- 242 (746)
+|..|+.+++|+.|+|++|.|++.+|..+..+...+..++|++|.+++.+|.. |..|+++.|
T Consensus 308 -------lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~ 374 (727)
T 4b8c_D 308 -------LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQR 374 (727)
T ss_dssp -------CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--------------------
T ss_pred -------cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeeccccccc
Confidence 56668899999999999999999999888776534456789999999888864 456666666
Q ss_pred ---cceecCCcCCCCCCCCceeeccccccc
Q 041467 243 ---QLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 243 ---~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
.+.+..+..+.++..+....+++|.+.
T Consensus 375 ~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 375 EYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ---------------------------CCC
T ss_pred ccCCccccccchhhcccccceeeeeccccc
Confidence 333333334445555555556666544
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.70 E-value=4.1e-17 Score=158.99 Aligned_cols=151 Identities=20% Similarity=0.246 Sum_probs=120.2
Q ss_pred cCCCCCCEEeccCCCccc---ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCC
Q 041467 107 GHLKSLLLLSLAFNQFLS---LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCS 183 (746)
Q Consensus 107 ~~l~~L~~L~Ls~N~l~~---l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~ 183 (746)
..+++|+.|++++|.+.. +..+++|++|++++|.++. +..+..+++|++|++++|.+++ ..+..+..++
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~------~~~~~l~~l~ 112 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLTGIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTS------DKIPNLSGLT 112 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCTTGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBG------GGSCCCTTCT
T ss_pred hhcCCccEEeccCCCccChHHHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCc------ccChhhcCCC
Confidence 456677777777777744 4567889999999997763 3478889999999999999875 3456688899
Q ss_pred CCCEEEcccccccccCChhhhhcccccceEEcccCc-ccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceee
Q 041467 184 KLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNR-ISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLN 262 (746)
Q Consensus 184 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~-i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 262 (746)
+|++|++++|++++..|..+..++ +|+.|++++|+ ++ .+| .+..+++|++|++++|++.+ ++ .+..+++|+.|+
T Consensus 113 ~L~~L~Ls~n~i~~~~~~~l~~l~-~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~ 187 (197)
T 4ezg_A 113 SLTLLDISHSAHDDSILTKINTLP-KVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLY 187 (197)
T ss_dssp TCCEEECCSSBCBGGGHHHHTTCS-SCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEE
T ss_pred CCCEEEecCCccCcHhHHHHhhCC-CCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEE
Confidence 999999999999887888888887 79999999998 65 455 68899999999999999975 44 688899999999
Q ss_pred cccccccc
Q 041467 263 IGGNHLQG 270 (746)
Q Consensus 263 Ls~N~l~~ 270 (746)
+++|++.+
T Consensus 188 l~~N~i~~ 195 (197)
T 4ezg_A 188 AFSQTIGG 195 (197)
T ss_dssp ECBC----
T ss_pred eeCcccCC
Confidence 99998863
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-17 Score=169.84 Aligned_cols=127 Identities=20% Similarity=0.143 Sum_probs=97.7
Q ss_pred CCCCCCeEeecCCeeEEE-----------EEeehhhhhhh------------------------hhhHHHHHHHHHhhcC
Q 041467 481 NFSPANKIREGGFNIVYN-----------VAMKVANLKQK------------------------EASRSFAAEFNALRNI 525 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~-----------vavK~~~~~~~------------------------~~~~~~~~E~~~l~~l 525 (746)
-|+..+.||+|+||.||+ ||||+++.... .....+.+|+++++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356788999999999994 79997542210 1123688999999999
Q ss_pred CCCce--eeEEEEEecCCcccchhhhccC-C----cccc--cCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEEcCCCCC
Q 041467 526 RHRNL--IKIITICSSIDFEGFDFKAISN-G----QLRL--CNLSLTQRVNIAIDVAFAIEYLR-HHCQPSIVHGDLKPS 595 (746)
Q Consensus 526 ~HpnI--v~l~~~~~~~~~~~lv~e~~~~-g----~l~~--~~l~~~~~~~i~~~i~~~l~yLH-~~~~~~ivHrDlkp~ 595 (746)
+|++| +..+++ ...++||||+.+ | .+.. ...++.++..++.|++.|++||| +. +|+||||||+
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlkp~ 200 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEA---ELVHADLSEY 200 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCSTT
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHH
Confidence 98864 444442 367899999942 4 3331 12335678899999999999999 88 9999999999
Q ss_pred CeeeCCCCcEEEccccccccc
Q 041467 596 NILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 596 NILl~~~~~~ki~DfGla~~~ 616 (746)
|||+++ .++|+|||+|...
T Consensus 201 NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 201 NIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SEEESS--SEEECCCTTCEET
T ss_pred HEEEcC--cEEEEECcccccC
Confidence 999998 9999999999764
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.67 E-value=3e-16 Score=152.12 Aligned_cols=133 Identities=20% Similarity=0.221 Sum_probs=101.2
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCc-cccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEcc
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPA-NLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID 98 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 98 (746)
-+++++++|+++ .+|..+.. +|++|+|++|+|++..+. .|+.+++|++|+|++|.+.+..|..|.
T Consensus 10 ~~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~----------- 75 (192)
T 1w8a_A 10 GTTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFE----------- 75 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTT-----------
T ss_pred CCEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcC-----------
Confidence 378999999996 78876654 899999999999866554 488999999999999988776665443
Q ss_pred CCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccccc
Q 041467 99 CGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINL 178 (746)
Q Consensus 99 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 178 (746)
++++|++|+|++|+|++..+..|.++++|++|+|++|+|++ ..|..
T Consensus 76 ----------------------------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~------~~~~~ 121 (192)
T 1w8a_A 76 ----------------------------GASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISC------VMPGS 121 (192)
T ss_dssp ----------------------------TCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCE------ECTTS
T ss_pred ----------------------------CcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCe------eCHHH
Confidence 34455666667777777777777788888888888888876 34556
Q ss_pred ccCCCCCCEEEcccccccccCC
Q 041467 179 LTNCSKLERLYFNRNGFEGVLP 200 (746)
Q Consensus 179 ~~~l~~L~~L~Ls~N~l~~~~p 200 (746)
|..+++|++|+|++|.+.+..+
T Consensus 122 ~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 122 FEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp STTCTTCCEEECTTCCBCCSGG
T ss_pred hhcCCCCCEEEeCCCCccCcCc
Confidence 7777888888888888876554
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.65 E-value=7.9e-16 Score=149.10 Aligned_cols=132 Identities=20% Similarity=0.318 Sum_probs=112.5
Q ss_pred cEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccc
Q 041467 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIK 211 (746)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~ 211 (746)
+.+++++|+++ .+|..+. .+|++|+|++|.+++.+.. ..|..+++|++|+|++|+|++..|..|..+. +|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~-----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~ 81 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSD-----GLFGRLPHLVKLELKRNQLTGIEPNAFEGAS-HIQ 81 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCS-----CSGGGCTTCCEEECCSSCCCCBCTTTTTTCT-TCC
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCc-----cccccCCCCCEEECCCCCCCCcCHhHcCCcc-cCC
Confidence 67888888886 4455443 3899999999998763221 2378889999999999999988899999987 799
Q ss_pred eEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccc
Q 041467 212 QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSI 272 (746)
Q Consensus 212 ~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 272 (746)
+|+|++|+|++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+.+..
T Consensus 82 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 82 ELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp EEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred EEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 9999999999988888999999999999999999999999999999999999999998654
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.2e-16 Score=164.82 Aligned_cols=236 Identities=10% Similarity=0.049 Sum_probs=118.5
Q ss_pred cccccEEecccCcCc--------------------ccCchhhhC--------CccCcEEecccCcCCccCCccccCCCCC
Q 041467 17 RTFLRYINLVNNGFN--------------------GEIPHQIGR--------LISLERLILSNNSFSCAIPANLSSGSNL 68 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~--------------------~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 68 (746)
+++|++|||++|++. .+.+.+|.+ +++|+.|+|.+ .++.+-+..|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 678999999999997 122234555 66666666665 5554444556666666
Q ss_pred CeeeCcCCCCCCccchhhcCCCCCCEEEccCCCC--------cCcccCCCCCC-EEeccCCCc-c-----cccCCCCCcE
Q 041467 69 IKLSTDSNNLVRDILTEICSLFKLERLRIDCGGR--------IDSLGHLKSLL-LLSLAFNQF-L-----SLSNASSLEM 133 (746)
Q Consensus 69 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~--------~~~~~~l~~L~-~L~Ls~N~l-~-----~l~~l~~L~~ 133 (746)
+.|++++|.+....+..|.++.++..+.+..... ..+|.++.+|+ .+.+....- . ......+++.
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 6666666655544444555554444444332100 01233333333 222221111 0 0001233333
Q ss_pred eeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccc-e
Q 041467 134 IEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIK-Q 212 (746)
Q Consensus 134 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~-~ 212 (746)
+.+.++-...........+++|+.|+|++|.++.++ ...|.+|++|+.|+|.+| ++..-+..|.++. +|+ .
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~------~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~-~L~~~ 278 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIP------DFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCG-RLAGT 278 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEEC------TTTTTTCTTCCEEECCTT-CCEECTTTTTTCT-TCCEE
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceec------HhhhhCCCCCCEEECCcc-cceehHHHhhCCh-hccEE
Confidence 433333111000000112556666666666555422 223555666666666655 5444444455554 466 6
Q ss_pred EEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceee
Q 041467 213 IAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLN 262 (746)
Q Consensus 213 L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 262 (746)
+++.+ +++.+-+.+|.++.+|+.|+++.|++....+..|.++++|+.++
T Consensus 279 l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 279 LELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 66655 55544455666666666666666666655555666666666654
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.63 E-value=7.4e-16 Score=162.96 Aligned_cols=278 Identities=13% Similarity=0.086 Sum_probs=153.1
Q ss_pred cccccEEecccCcCcccCchhhhC-CccCcEEecccCcCC--ccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCC
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGR-LISLERLILSNNSFS--CAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLE 93 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 93 (746)
+.+|+.|.++++ +....-..+.. +++|++|||++|+|. ...+.. ++.++.+.+..|.+ |.
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I----~~--------- 86 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFV----PA--------- 86 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEE----CT---------
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcccc---cccccccccccccc----CH---------
Confidence 345777777764 22222223333 667777777777776 222212 22234444444422 11
Q ss_pred EEEccCCCCcCcccC--------CCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEc
Q 041467 94 RLRIDCGGRIDSLGH--------LKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNL 160 (746)
Q Consensus 94 ~L~l~~~~~~~~~~~--------l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 160 (746)
.+|.+ +++|+.|+|+. ++. .|.++++|+.|++++|.++.+.+..|.++.++..+.+
T Consensus 87 ----------~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~ 155 (329)
T 3sb4_A 87 ----------YAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPL 155 (329)
T ss_dssp ----------TTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECT
T ss_pred ----------HHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecC
Confidence 23444 56666666665 442 4567778888888888877777778887777776666
Q ss_pred cCCCC----CCCCCCCccccccccCCCCCC-EEEcccccccccCChhhhhc---ccccceEEcccCcccccCCccccCCC
Q 041467 161 GVNNL----GSGTANELDFINLLTNCSKLE-RLYFNRNGFEGVLPHSIANL---SSTIKQIAMGSNRISSTIPHGIRNLV 232 (746)
Q Consensus 161 s~N~l----~~~~~~~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l---~~~L~~L~l~~N~i~~~~p~~~~~l~ 232 (746)
..+.. ... ....|.++..|+ .+.+... +.+|..+... ..+++.+.+.++-...........++
T Consensus 156 ~~~~~~~~~~~i------~~~~f~~~~~L~~~i~~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~ 226 (329)
T 3sb4_A 156 GSSDAYRFKNRW------EHFAFIEGEPLETTIQVGAM---GKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMP 226 (329)
T ss_dssp TCTHHHHTSTTT------TTSCEEESCCCEEEEEECTT---CCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCT
T ss_pred cchhhhhccccc------cccccccccccceeEEecCC---CcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcC
Confidence 55321 110 112344555666 4444332 2233333211 12455555554422211111112367
Q ss_pred CCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCC-eeeecCC
Q 041467 233 NLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLL-GLSVSHN 311 (746)
Q Consensus 233 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~-~L~Ls~N 311 (746)
+|+.|+|++|+++...+..|.++++|+.|+|++| ++. ..+.+|.+|.+|+ .+++.+
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~---------------------I~~~aF~~~~~L~~~l~l~~- 283 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKT---------------------IGQRVFSNCGRLAGTLELPA- 283 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCE---------------------ECTTTTTTCTTCCEEEEECT-
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cce---------------------ehHHHhhCChhccEEEEEcc-
Confidence 7777777777777666667777777777777766 431 2234566777777 777766
Q ss_pred cCccccchhhhhcccccceEEccCccccccCchhhhcccCCcee
Q 041467 312 KLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRL 355 (746)
Q Consensus 312 ~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L 355 (746)
+++..-+..|..+.+| +.+++++|.++..-+..|.++++|+.+
T Consensus 284 ~l~~I~~~aF~~c~~L-~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 284 SVTAIEFGAFMGCDNL-RYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp TCCEECTTTTTTCTTE-EEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred cceEEchhhhhCCccC-CEEEeCCCccCccchhhhcCCcchhhh
Confidence 5654444566666776 467777777765555566666666554
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.63 E-value=8.9e-16 Score=145.33 Aligned_cols=135 Identities=17% Similarity=0.182 Sum_probs=117.9
Q ss_pred CCCCCcEeeCccCccc-ccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhh
Q 041467 127 NASSLEMIEFSRNQFS-GGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIAN 205 (746)
Q Consensus 127 ~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 205 (746)
..++|+.|++++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 93 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--------SNLPKLPKLKKLELSENRIFGGLDMLAEK 93 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--------SSCCCCSSCCEEEEESCCCCSCCCHHHHH
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--------hhhccCCCCCEEECcCCcCchHHHHHHhh
Confidence 3478999999999998 67788889999999999999999862 45788999999999999999878888888
Q ss_pred cccccceEEcccCcccccC-CccccCCCCCCeeecccccceecCC---cCCCCCCCCceeecccccccc
Q 041467 206 LSSTIKQIAMGSNRISSTI-PHGIRNLVNLNWLTMESSQLIGTIP---PLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 206 l~~~L~~L~l~~N~i~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
++ +|+.|++++|+|++.. +..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+..
T Consensus 94 l~-~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 94 LP-NLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CT-TCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred CC-CCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 87 7999999999999642 2789999999999999999986555 478999999999999999873
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.61 E-value=7.9e-16 Score=142.52 Aligned_cols=129 Identities=17% Similarity=0.194 Sum_probs=112.7
Q ss_pred CCCCcEeeCccCccc-ccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhc
Q 041467 128 ASSLEMIEFSRNQFS-GGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANL 206 (746)
Q Consensus 128 l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 206 (746)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--------~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l 87 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--------ANLPKLNKLKKLELSDNRVSGGLEVLAEKC 87 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--------TTCCCCTTCCEEECCSSCCCSCTHHHHHHC
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--------hhhhcCCCCCEEECCCCcccchHHHHhhhC
Confidence 468899999999998 77888899999999999999999863 457889999999999999998788888888
Q ss_pred ccccceEEcccCccccc-CCccccCCCCCCeeecccccceecCC---cCCCCCCCCceeeccc
Q 041467 207 SSTIKQIAMGSNRISST-IPHGIRNLVNLNWLTMESSQLIGTIP---PLIGETPNLQLLNIGG 265 (746)
Q Consensus 207 ~~~L~~L~l~~N~i~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~ 265 (746)
+ +|+.|++++|++++. .+..++.+++|++|++++|.+++..+ ..+..+++|+.|++++
T Consensus 88 ~-~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 88 P-NLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp T-TCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred C-CCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 7 799999999999873 34789999999999999999987655 4788999999999874
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.5e-15 Score=143.84 Aligned_cols=137 Identities=18% Similarity=0.250 Sum_probs=84.0
Q ss_pred CCCCEEEccccccc-ccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCcee
Q 041467 183 SKLERLYFNRNGFE-GVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLL 261 (746)
Q Consensus 183 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 261 (746)
++|+.|++++|.++ +.+|..+..++ +|+.|++++|.+++. ..|..+++|++|+|++|++.+.+|..+..+++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~-~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFV-NLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGG-GCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCC-CCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 55666666666665 45566556665 566667766666653 556666777777777777666566666666777777
Q ss_pred ecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccc---hhhhhcccccceEEccCccc
Q 041467 262 NIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLP---QQILSVTTLSLYLELDNNLL 338 (746)
Q Consensus 262 ~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~l~~~L~Ls~N~l 338 (746)
+|++|.+++.. .+..+..+++|+.|++++|++++..+ ..+..++++ ++|++++|.+
T Consensus 101 ~Ls~N~l~~~~--------------------~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L-~~L~l~~n~~ 159 (168)
T 2ell_A 101 NLSGNKLKDIS--------------------TLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQL-TYLDGYDRED 159 (168)
T ss_dssp ECBSSSCCSSG--------------------GGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSC-CEETTEETTS
T ss_pred eccCCccCcch--------------------hHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccC-cEecCCCCCh
Confidence 77776665211 11345566667777777777764322 255666666 4666666666
Q ss_pred cccCch
Q 041467 339 NGSLPP 344 (746)
Q Consensus 339 ~~~~p~ 344 (746)
. .+|.
T Consensus 160 ~-~~~~ 164 (168)
T 2ell_A 160 Q-EAPD 164 (168)
T ss_dssp C-BCCS
T ss_pred h-hccc
Confidence 5 3443
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=5.6e-15 Score=143.12 Aligned_cols=128 Identities=17% Similarity=0.251 Sum_probs=107.4
Q ss_pred cEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccc
Q 041467 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIK 211 (746)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~ 211 (746)
+.+++++|+++. +|..+. ++|++|+|++|.|+. +|..|.++++|+.|+|++|.|++..|..|..+. +|+
T Consensus 13 ~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~~-------ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~-~L~ 81 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFTL-------VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMT-QLL 81 (193)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCCEEECCSSCCCS-------CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCT-TCC
T ss_pred CEEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCch-------hHHHhhcccCCCEEECCCCcCCEeCHhHccCCC-CCC
Confidence 567788888874 444332 588899999998874 456788889999999999999877777888887 799
Q ss_pred eEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccc
Q 041467 212 QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 212 ~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
.|+|++|+|++..|..|.++++|++|+|++|++.+..+..|..+++|+.|+|++|.+..
T Consensus 82 ~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 82 TLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp EEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred EEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99999999998888889999999999999999997777789999999999999999874
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.57 E-value=3.6e-15 Score=138.04 Aligned_cols=70 Identities=21% Similarity=0.162 Sum_probs=58.8
Q ss_pred cccccEEecccCcCc-ccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcC
Q 041467 17 RTFLRYINLVNNGFN-GEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICS 88 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 88 (746)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++++++|++|+|++|.+.+.+|..+..
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~ 86 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEK 86 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHH
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhh
Confidence 467999999999997 78888889999999999999999865 77888999999999999887766665443
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.2e-14 Score=140.76 Aligned_cols=129 Identities=22% Similarity=0.262 Sum_probs=99.5
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccC
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 99 (746)
-+++++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|.+.+..+..|
T Consensus 12 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f------------- 74 (193)
T 2wfh_A 12 DTVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSF------------- 74 (193)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTT-------------
T ss_pred CCEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHc-------------
Confidence 368999999997 6777654 58999999999998 688899999999999999998866544433
Q ss_pred CCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccc
Q 041467 100 GGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLL 179 (746)
Q Consensus 100 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 179 (746)
.++++|+.|+|++|+|++..+..|.++++|++|+|++|.|+..+ +..|
T Consensus 75 --------------------------~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~------~~~~ 122 (193)
T 2wfh_A 75 --------------------------SNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVP------EGAF 122 (193)
T ss_dssp --------------------------TTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCC------TTTT
T ss_pred --------------------------cCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeC------hhhh
Confidence 34456666677777777777778888888888888888887632 2346
Q ss_pred cCCCCCCEEEcccccccc
Q 041467 180 TNCSKLERLYFNRNGFEG 197 (746)
Q Consensus 180 ~~l~~L~~L~Ls~N~l~~ 197 (746)
..+++|+.|+|++|.+..
T Consensus 123 ~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 123 NDLSALSHLAIGANPLYC 140 (193)
T ss_dssp TTCTTCCEEECCSSCEEC
T ss_pred hcCccccEEEeCCCCeec
Confidence 677888888888887764
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.6e-14 Score=137.93 Aligned_cols=133 Identities=16% Similarity=0.175 Sum_probs=102.2
Q ss_pred CcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhccccc
Q 041467 131 LEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTI 210 (746)
Q Consensus 131 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L 210 (746)
.+.+++++|+++.. |..+ .++|+.|++++|.+++.+ +..|..+++|++|++++|++++..+..+..+. +|
T Consensus 9 ~~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L 78 (177)
T 2o6r_A 9 GTEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLP------HGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLT-KL 78 (177)
T ss_dssp TTEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCC------TTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT-TC
T ss_pred CCEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeC------HHHhcCcccccEEECCCCcceEeChhHccCCC-cc
Confidence 45677777777643 3322 367888888888887532 23467778888888888888866566667776 68
Q ss_pred ceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccccc
Q 041467 211 KQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSIL 273 (746)
Q Consensus 211 ~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 273 (746)
++|++++|+|++..+..|..+++|++|++++|++.+..+..+..+++|++|+|++|.+.+..+
T Consensus 79 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 79 TILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999999999987777778899999999999999987766677889999999999999986543
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.55 E-value=2e-13 Score=147.67 Aligned_cols=253 Identities=9% Similarity=0.084 Sum_probs=174.9
Q ss_pred CcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccch
Q 041467 5 NLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILT 84 (746)
Q Consensus 5 ~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 84 (746)
++.++....|.. .+|+.++|..| ++.+-..+|.+. +|+.++|.+ .++.+-+..|.++.+|+.+++++|++......
T Consensus 123 ~i~~I~~~aF~~-~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~ 198 (401)
T 4fdw_A 123 SVKSIPKDAFRN-SQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPAS 198 (401)
T ss_dssp TCCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTT
T ss_pred ccCEehHhhccc-CCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechh
Confidence 344444445554 46888888776 665666778774 688888885 66656667888888899999888887554444
Q ss_pred hhcCCCCCCEEEccCCCC---cCcccCCCCCCEEeccCCCc----ccccCCCCCcEeeCccCcccccCCccccCCCCCCE
Q 041467 85 EICSLFKLERLRIDCGGR---IDSLGHLKSLLLLSLAFNQF----LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSW 157 (746)
Q Consensus 85 ~~~~l~~L~~L~l~~~~~---~~~~~~l~~L~~L~Ls~N~l----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 157 (746)
.|. ..+|+.+.+..+-. ..+|.++++|+.+++..|-- ..|.+ .+|+.+.+ .|.++.+...+|.++++|+.
T Consensus 199 aF~-~~~L~~l~lp~~l~~I~~~aF~~~~~L~~l~l~~~l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~ 275 (401)
T 4fdw_A 199 TFV-YAGIEEVLLPVTLKEIGSQAFLKTSQLKTIEIPENVSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAE 275 (401)
T ss_dssp TTT-TCCCSEEECCTTCCEECTTTTTTCTTCCCEECCTTCCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCE
T ss_pred hEe-ecccCEEEeCCchheehhhHhhCCCCCCEEecCCCccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCE
Confidence 555 57888888864311 15677888888888876521 23445 67888888 45577677788888888888
Q ss_pred EEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCee
Q 041467 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWL 237 (746)
Q Consensus 158 L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L 237 (746)
+++.+|.+...... ......|.+|++|+.++|.+ .++..-...|.++. +|+.+.+..| ++.+-+.+|.++ +|+.+
T Consensus 276 l~l~~~~~~~~~~~-~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~-~L~~l~lp~~-l~~I~~~aF~~~-~L~~l 350 (401)
T 4fdw_A 276 VTTYGSTFNDDPEA-MIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNR-KVTQLTIPAN-VTQINFSAFNNT-GIKEV 350 (401)
T ss_dssp EEEESSCCCCCTTC-EECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCC-SCCEEEECTT-CCEECTTSSSSS-CCCEE
T ss_pred EEeCCccccCCccc-EECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCC-CccEEEECcc-ccEEcHHhCCCC-CCCEE
Confidence 88888776521111 01235677888888888874 46645556666665 6888888554 665666778888 88888
Q ss_pred ecccccceecCCcCCCCCC-CCceeeccccccc
Q 041467 238 TMESSQLIGTIPPLIGETP-NLQLLNIGGNHLQ 269 (746)
Q Consensus 238 ~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 269 (746)
++++|.+....+..|.+++ +++.|++..+.+.
T Consensus 351 ~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 351 KVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp EECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 8888887766667777774 6778877777654
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.2e-14 Score=135.77 Aligned_cols=131 Identities=19% Similarity=0.229 Sum_probs=111.3
Q ss_pred CCEEeccCCCccccc--CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEE
Q 041467 112 LLLLSLAFNQFLSLS--NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLY 189 (746)
Q Consensus 112 L~~L~Ls~N~l~~l~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~ 189 (746)
.+.+++++|++..++ -.++|+.|++++|++++..+..|..+++|++|+|++|.+++.+ +..|..+++|++|+
T Consensus 9 ~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------~~~~~~l~~L~~L~ 82 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLP------DGVFDKLTKLTILY 82 (177)
T ss_dssp TTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC------TTTTTTCTTCCEEE
T ss_pred CCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeC------hhHccCCCccCEEE
Confidence 467888888886654 3478999999999999888888999999999999999998633 34578899999999
Q ss_pred cccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCC
Q 041467 190 FNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIP 249 (746)
Q Consensus 190 Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 249 (746)
|++|++++..+..+..+. +|+.|++++|++++..+..|..+++|++|+|++|.+.+..|
T Consensus 83 l~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 83 LHENKLQSLPNGVFDKLT-QLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCCCCCTTTTTTCT-TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCCccccCHHHhhCCc-ccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999999977777778887 79999999999997666678999999999999999876543
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.9e-14 Score=137.32 Aligned_cols=134 Identities=12% Similarity=0.182 Sum_probs=107.2
Q ss_pred cccCCCCCcEeeCccCcccccCCccccCC-CCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChh
Q 041467 124 SLSNASSLEMIEFSRNQFSGGVSVDFSRL-KNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHS 202 (746)
Q Consensus 124 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 202 (746)
.+.++++|+.|++++|+++.. +. +..+ ++|++|+|++|.+++ + ..+..+++|++|++++|.+++..|..
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~-------~-~~l~~l~~L~~L~Ls~N~l~~~~~~~ 83 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRK-------L-DGFPLLRRLKTLLVNNNRICRIGEGL 83 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCE-------E-CCCCCCSSCCEEECCSSCCCEECSCH
T ss_pred hcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCc-------c-cccccCCCCCEEECCCCcccccCcch
Confidence 345677888888888888854 44 4444 489999999999875 2 45788899999999999998665555
Q ss_pred hhhcccccceEEcccCcccccCCc--cccCCCCCCeeecccccceecCCcC----CCCCCCCceeecccccccc
Q 041467 203 IANLSSTIKQIAMGSNRISSTIPH--GIRNLVNLNWLTMESSQLIGTIPPL----IGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 203 ~~~l~~~L~~L~l~~N~i~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~ 270 (746)
+..++ +|++|++++|+|+ .+|. .+..+++|+.|++++|.+. .+|.. +..+++|+.||+++|.+..
T Consensus 84 ~~~l~-~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 84 DQALP-DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp HHHCT-TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred hhcCC-CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 67887 7999999999996 4666 7889999999999999997 45664 8899999999999998763
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.6e-15 Score=160.13 Aligned_cols=128 Identities=16% Similarity=0.201 Sum_probs=92.6
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhhh--------------h--------hhHHHHHHHHHhhcCCCCc
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQK--------------E--------ASRSFAAEFNALRNIRHRN 529 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~--------------~--------~~~~~~~E~~~l~~l~Hpn 529 (746)
.-|++...||+|++|.||+ ||||+++.... . ......+|.+.|.++.++.
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3488999999999999997 99998643210 0 0112346777777776554
Q ss_pred ee--eEEEEEecCCcccchhhhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC----
Q 041467 530 LI--KIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV---- 603 (746)
Q Consensus 530 Iv--~l~~~~~~~~~~~lv~e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~---- 603 (746)
+. ..+++ ...++||||+.++.+... ........++.|++.|+.|||+. +||||||||.|||+++++
T Consensus 175 v~vp~p~~~----~~~~LVME~i~G~~L~~l-~~~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~d 246 (397)
T 4gyi_A 175 FPVPEPIAQ----SRHTIVMSLVDALPMRQV-SSVPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAED 246 (397)
T ss_dssp CSCCCEEEE----ETTEEEEECCSCEEGGGC-CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSSC
T ss_pred CCCCeeeec----cCceEEEEecCCccHhhh-cccHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCccc
Confidence 42 22222 234799999988877522 23345567899999999999999 999999999999998776
Q ss_pred ------cEEEcccccccc
Q 041467 604 ------VTHVGDLGLAKF 615 (746)
Q Consensus 604 ------~~ki~DfGla~~ 615 (746)
.+.|+||+=+..
T Consensus 247 ~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 247 PSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp TTSEEEEEEECCCTTCEE
T ss_pred ccccccceEEEEeCCccc
Confidence 388999986643
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.50 E-value=2.4e-14 Score=136.56 Aligned_cols=133 Identities=22% Similarity=0.241 Sum_probs=75.1
Q ss_pred ccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCC
Q 041467 179 LTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNL 258 (746)
Q Consensus 179 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 258 (746)
+.++++|+.|++++|+++ .+|. +..+.++|+.|++++|+|++. ..|+.+++|++|+|++|++.+..|..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 334455555555555555 2332 333332466666666666643 456666666666666666665444444666666
Q ss_pred ceeecccccccccccccccccChHHhhhccCCCCCCc--cccCCCCCCeeeecCCcCccccchh----hhhcccccceEE
Q 041467 259 QLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPS--SLANCKSLLGLSVSHNKLTSTLPQQ----ILSVTTLSLYLE 332 (746)
Q Consensus 259 ~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~l~~~L~ 332 (746)
++|+|++|+++ .+|. .+..+++|+.|++++|.++ .+|.. +..++.+ ++||
T Consensus 91 ~~L~L~~N~i~----------------------~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L-~~Ld 146 (176)
T 1a9n_A 91 TELILTNNSLV----------------------ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQV-RVLD 146 (176)
T ss_dssp CEEECCSCCCC----------------------CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTC-SEET
T ss_pred CEEECCCCcCC----------------------cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcc-ceeC
Confidence 66666666664 1222 4556666666666666665 45553 5566666 4566
Q ss_pred ccCcccc
Q 041467 333 LDNNLLN 339 (746)
Q Consensus 333 Ls~N~l~ 339 (746)
+++|.+.
T Consensus 147 ~~~n~~~ 153 (176)
T 1a9n_A 147 FQKVKLK 153 (176)
T ss_dssp TEECCHH
T ss_pred CCcCCHH
Confidence 6666554
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.45 E-value=2.6e-12 Score=138.78 Aligned_cols=190 Identities=14% Similarity=0.114 Sum_probs=87.3
Q ss_pred CCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCC---CcCcccCCCCCCEEe
Q 041467 40 RLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGG---RIDSLGHLKSLLLLS 116 (746)
Q Consensus 40 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~---~~~~~~~l~~L~~L~ 116 (746)
.+..++.+.+.+ .++.+-+..|.+. +|+.+.+..| +...-...|.+ .+|+.+.+..+- ...+|.++++|
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~~l~~I~~~aF~~c~~L---- 182 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPSTLEQLKEDIFYYCYNL---- 182 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCTTCCEECSSTTTTCTTC----
T ss_pred ecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCCCccEehHHHhhCcccC----
Confidence 345666777654 3454445566664 6777777654 43333334444 245555543210 00234444444
Q ss_pred ccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEccccccc
Q 041467 117 LAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFE 196 (746)
Q Consensus 117 Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 196 (746)
+.++|++|+++.+....|. ..+|+.+.|..+ ++.+ -..+|.+|++|+.+++..| ++
T Consensus 183 ---------------~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I------~~~aF~~~~~L~~l~l~~~-l~ 238 (401)
T 4fdw_A 183 ---------------KKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEI------GSQAFLKTSQLKTIEIPEN-VS 238 (401)
T ss_dssp ---------------CEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEE------CTTTTTTCTTCCCEECCTT-CC
T ss_pred ---------------CeeecCCCcceEechhhEe-ecccCEEEeCCc-hhee------hhhHhhCCCCCCEEecCCC-cc
Confidence 4444444444444444443 344555555422 3221 1123444555555555443 33
Q ss_pred ccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccce-----ecCCcCCCCCCCCceeecc
Q 041467 197 GVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLI-----GTIPPLIGETPNLQLLNIG 264 (746)
Q Consensus 197 ~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls 264 (746)
..-...|.+ + .|+.+.+ .|.++.+-+.+|.++.+|+.+++.+|.+. ...+..|.++++|+.++|.
T Consensus 239 ~I~~~aF~~-~-~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 239 TIGQEAFRE-S-GITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp EECTTTTTT-C-CCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC
T ss_pred Ccccccccc-C-CccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC
Confidence 222333333 2 3555555 23344333445555555555555544433 2334455555555555554
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.45 E-value=9.9e-16 Score=149.27 Aligned_cols=135 Identities=24% Similarity=0.303 Sum_probs=82.8
Q ss_pred ccCCCCCcEeeCccCcccccCCc------cccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEccccccccc
Q 041467 125 LSNASSLEMIEFSRNQFSGGVSV------DFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGV 198 (746)
Q Consensus 125 l~~l~~L~~L~Ls~N~l~~~~~~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 198 (746)
+.....++.++++.|.+++..|. .|..+++|++|+|++|.+++ +| .+..+++|+.|++++|.++ .
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-------l~-~~~~l~~L~~L~l~~n~l~-~ 84 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-------IS-SLSGMENLRILSLGRNLIK-K 84 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-------CC-CHHHHTTCCEEEEEEEEEC-S
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-------cc-ccccCCCCCEEECCCCCcc-c
Confidence 34456677777777777776665 66666777777777776654 22 4555666777777777666 4
Q ss_pred CChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCC-cCCCCCCCCceeeccccccccc
Q 041467 199 LPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIP-PLIGETPNLQLLNIGGNHLQGS 271 (746)
Q Consensus 199 ~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ 271 (746)
+|..+..++ +|+.|++++|++++ +| .+..+++|++|++++|++.+..+ ..+..+++|++|++++|.+++.
T Consensus 85 l~~~~~~~~-~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 85 IENLDAVAD-TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp CSSHHHHHH-HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred ccchhhcCC-cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 565555554 56666666666664 33 45566666666666666653221 2455566666666666665543
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.5e-15 Score=147.88 Aligned_cols=114 Identities=17% Similarity=0.173 Sum_probs=56.2
Q ss_pred cCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCcccc
Q 041467 150 SRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIR 229 (746)
Q Consensus 150 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~ 229 (746)
.....++.++++.|.+.+..+.-..+|..+..+++|++|+|++|.+++ +| .+..+. +|+.|++++|+++ .+|..+.
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~-~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGME-NLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHT-TCCEEEEEEEEEC-SCSSHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCC-CCCEEECCCCCcc-cccchhh
Confidence 344555555565555554322222233345555555555555555553 44 455554 4555555555555 3444444
Q ss_pred CCCCCCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 230 NLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 230 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
.+++|++|++++|++.+ +| .+..+++|++|++++|+++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC
Confidence 44555555555555543 22 3444455555555555444
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.41 E-value=7e-12 Score=135.83 Aligned_cols=130 Identities=13% Similarity=0.144 Sum_probs=67.2
Q ss_pred ccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCe
Q 041467 226 HGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLG 305 (746)
Q Consensus 226 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~ 305 (746)
..|.++..|+.+.+..+.. ......|..+..++.+....+.+.........+|+.+.+. +++...-..+|.+|.+|+.
T Consensus 247 ~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~-~~i~~I~~~aF~~c~~L~~ 324 (394)
T 4fs7_A 247 SVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLL-DSVKFIGEEAFESCTSLVS 324 (394)
T ss_dssp STTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEEC-TTCCEECTTTTTTCTTCCE
T ss_pred ccccccccceeEEcCCCcc-eeeccccccccccceeccCceeeccccccccccccccccc-cccceechhhhcCCCCCCE
Confidence 3444445555555443322 2333444444555554444443332222222222222221 2233333456777888888
Q ss_pred eeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCC
Q 041467 306 LSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEY 360 (746)
Q Consensus 306 L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~ 360 (746)
+++..+ ++..-...|.++.+| +.+++..| ++..-...|.++.+|+.+.+|..
T Consensus 325 i~lp~~-v~~I~~~aF~~c~~L-~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 325 IDLPYL-VEEIGKRSFRGCTSL-SNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp ECCCTT-CCEECTTTTTTCTTC-CEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred EEeCCc-ccEEhHHhccCCCCC-CEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 888644 553334556667777 56777666 55444566777777777777654
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.39 E-value=1e-12 Score=124.26 Aligned_cols=107 Identities=19% Similarity=0.195 Sum_probs=72.4
Q ss_pred cccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEcc
Q 041467 19 FLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID 98 (746)
Q Consensus 19 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 98 (746)
..+.|++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++.+..+..|
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f------------ 74 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVF------------ 74 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT------------
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhc------------
Confidence 3568888888887 5776553 778888888888887777778888888888888777754333222
Q ss_pred CCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCC
Q 041467 99 CGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167 (746)
Q Consensus 99 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (746)
.++++|++|+|++|+|++..+..|..+++|++|+|++|.+..
T Consensus 75 ---------------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 75 ---------------------------DKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp ---------------------------TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred ---------------------------cCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 234455555666666666555566666666666666666654
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.39 E-value=5.8e-12 Score=136.45 Aligned_cols=60 Identities=15% Similarity=0.203 Sum_probs=26.3
Q ss_pred cccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecC
Q 041467 296 SLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIP 358 (746)
Q Consensus 296 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp 358 (746)
.|..+.+|+.+.+..+ ++..-...|.++.+| +.+++.++ ++..-...|.++++|+.+.+|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L-~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp 351 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSL-VSIDLPYL-VEEIGKRSFRGCTSLSNINFP 351 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTC-CEECCCTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cccccccccccccccc-cceechhhhcCCCCC-CEEEeCCc-ccEEhHHhccCCCCCCEEEEC
Confidence 3445555555555433 332222333444444 34555432 332223445555555555444
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=123.57 Aligned_cols=107 Identities=14% Similarity=0.159 Sum_probs=80.9
Q ss_pred CCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCC
Q 041467 155 LSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNL 234 (746)
Q Consensus 155 L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L 234 (746)
.+.+++++|.++.++ ..+ .++|+.|+|++|+|++..|..|..+. +|++|+|++|+|++..+..|.++++|
T Consensus 11 ~~~l~~s~n~l~~ip-------~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~-~L~~L~Ls~N~l~~l~~~~f~~l~~L 80 (170)
T 3g39_A 11 GTTVDCSGKSLASVP-------TGI--PTTTQVLYLYDNQITKLEPGVFDRLT-QLTRLDLDNNQLTVLPAGVFDKLTQL 80 (170)
T ss_dssp TTEEECTTSCCSSCC-------SCC--CTTCSEEECCSSCCCCCCTTTTTTCT-TCSEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCEEEeCCCCcCccC-------ccC--CCCCcEEEcCCCcCCccChhhhcCcc-cCCEEECCCCCcCccChhhccCCCCC
Confidence 356666666665422 222 25677777777777776677777776 68888888888887666678888899
Q ss_pred CeeecccccceecCCcCCCCCCCCceeeccccccccc
Q 041467 235 NWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGS 271 (746)
Q Consensus 235 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 271 (746)
++|+|++|++.+..+..|..+++|++|+|++|.+...
T Consensus 81 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 81 TQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 9999999998877777788899999999999988743
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.8e-12 Score=123.09 Aligned_cols=106 Identities=23% Similarity=0.242 Sum_probs=72.2
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccC
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 99 (746)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++.+..+..
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~-------------- 76 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGV-------------- 76 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT--------------
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhH--------------
Confidence 468888888886 6777664 78888888888888777778888888888888888775432221
Q ss_pred CCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCC
Q 041467 100 GGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167 (746)
Q Consensus 100 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (746)
|.++++|+.|+|++|+|++..+..|..+++|++|+|++|.+..
T Consensus 77 -------------------------~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 77 -------------------------FDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp -------------------------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred -------------------------hCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCccc
Confidence 1234455555566666665555556666666666666666654
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.35 E-value=2.3e-12 Score=122.31 Aligned_cols=105 Identities=17% Similarity=0.209 Sum_probs=80.4
Q ss_pred CEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCC
Q 041467 156 SWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLN 235 (746)
Q Consensus 156 ~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~ 235 (746)
+.+++++|.++.+ |..+. ++|+.|+|++|+|++..|..|..+. +|+.|+|++|+|++..+..|.++++|+
T Consensus 15 ~~l~~~~n~l~~i-------P~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~i~~~~~~~l~~L~ 84 (174)
T 2r9u_A 15 TLVNCQNIRLASV-------PAGIP--TDKQRLWLNNNQITKLEPGVFDHLV-NLQQLYFNSNKLTAIPTGVFDKLTQLT 84 (174)
T ss_dssp SEEECCSSCCSSC-------CSCCC--TTCSEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred cEEEeCCCCCCcc-------CCCcC--CCCcEEEeCCCCccccCHHHhcCCc-CCCEEECCCCCCCccChhHhCCcchhh
Confidence 5667777766542 22222 6777788888888777777777776 688888888888876566678889999
Q ss_pred eeecccccceecCCcCCCCCCCCceeecccccccc
Q 041467 236 WLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 236 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
+|+|++|++.+..+..|..+++|++|+|++|.+..
T Consensus 85 ~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 85 QLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred EEECCCCccceeCHHHhccccCCCEEEeCCCCccc
Confidence 99999999987666678899999999999998874
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.1e-13 Score=148.09 Aligned_cols=61 Identities=20% Similarity=0.116 Sum_probs=27.7
Q ss_pred ccccEEecccCcCcccCchhhhCC-----ccCcEEecccCcCCccCCccc-cCCCCCCeeeCcCCCC
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRL-----ISLERLILSNNSFSCAIPANL-SSGSNLIKLSTDSNNL 78 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l 78 (746)
+.|++|+|++|.|+......+..+ ++|++|+|++|.|+..-...+ ..+++|+.|+|++|.+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l 138 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSL 138 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCC
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCC
Confidence 345555555555543333333222 455555555555543222222 1234455555555544
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=9.6e-13 Score=140.83 Aligned_cols=146 Identities=13% Similarity=0.134 Sum_probs=79.6
Q ss_pred CCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccc-----cCCCCCCeeeccccccee----cCCcCCC
Q 041467 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-----RNLVNLNWLTMESSQLIG----TIPPLIG 253 (746)
Q Consensus 183 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~ 253 (746)
++|+.|+|++|.++......+.....+|+.|+|++|+|+......+ ...++|++|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 4566666666665433222222211246666666666653322222 234567777777777653 2333345
Q ss_pred CCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccc----cchhhhhcccccc
Q 041467 254 ETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTST----LPQQILSVTTLSL 329 (746)
Q Consensus 254 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~l~~ 329 (746)
.+++|++|+|++|.|+..... .++..+..+++|++|+|++|.|+.. ++..+...+.| +
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~-----------------~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L-~ 242 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLE-----------------LLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSL-E 242 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHH-----------------HHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSC-C
T ss_pred cCCCcCEEeCCCCCCCcHHHH-----------------HHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCC-C
Confidence 667777777777777632111 1233445566788888888887642 33334445666 5
Q ss_pred eEEccCccccccCchhh
Q 041467 330 YLELDNNLLNGSLPPEV 346 (746)
Q Consensus 330 ~L~Ls~N~l~~~~p~~~ 346 (746)
.|+|++|.|+..-...+
T Consensus 243 ~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 243 LLHLYFNELSSEGRQVL 259 (372)
T ss_dssp EEECTTSSCCHHHHHHH
T ss_pred EEeccCCCCCHHHHHHH
Confidence 67777777764433333
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.17 E-value=6e-11 Score=126.07 Aligned_cols=105 Identities=16% Similarity=0.106 Sum_probs=68.9
Q ss_pred cEEecccC-cCcccCchhhhCCccCcEEeccc-CcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEcc
Q 041467 21 RYINLVNN-GFNGEIPHQIGRLISLERLILSN-NSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID 98 (746)
Q Consensus 21 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 98 (746)
..++++++ +|+ .+|. |..+++|++|+|++ |+|++..|..|+++++|+.|+|++|++.+..|..|.
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~----------- 77 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFH----------- 77 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGG-----------
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhc-----------
Confidence 35688887 787 5777 88888888888885 888876667787787787777777777655444332
Q ss_pred CCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCC
Q 041467 99 CGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167 (746)
Q Consensus 99 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (746)
++++|+.|+|++|+|++.++..|..++ |+.|+|++|.+..
T Consensus 78 ----------------------------~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 78 ----------------------------FTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp ----------------------------SCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ----------------------------CCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 334445555555666655555555444 6666666666543
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2.9e-11 Score=123.15 Aligned_cols=140 Identities=15% Similarity=0.099 Sum_probs=108.8
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchh
Q 041467 476 SKATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~ 547 (746)
......|+.....+.|+.+.||+ +++|+...........+.+|+++++.+. |..+.++++++...+..|+||
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 34456787777888888899997 7888876432233346899999999985 677889999998888899999
Q ss_pred hhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 041467 548 KAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHC-------------------------------------------- 583 (746)
Q Consensus 548 e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~-------------------------------------------- 583 (746)
|++++.++.....+..+...++.+++++++.||+..
T Consensus 90 e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (263)
T 3tm0_A 90 SEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRE 169 (263)
T ss_dssp ECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHH
T ss_pred EecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHH
Confidence 999988876432233455688999999999999810
Q ss_pred ------------CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 584 ------------QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 584 ------------~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.+.++|+|++|.||++++++.+.|+||+.+..
T Consensus 170 l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 170 LYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13599999999999998765667999998754
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.14 E-value=7.3e-11 Score=125.42 Aligned_cols=89 Identities=17% Similarity=0.252 Sum_probs=53.6
Q ss_pred ccCCCCCCEEEccc-ccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCC
Q 041467 179 LTNCSKLERLYFNR-NGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257 (746)
Q Consensus 179 ~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 257 (746)
+..+++|+.|+|++ |.|++..|..|..+. +|+.|+|++|+|++..|..|.+|++|++|+|++|+|.+..+..|..++
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~- 104 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLG-ELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS- 104 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCC-CCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhcccc-CCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-
Confidence 44445555555553 555544445555554 466666666666665566666666666666666666655444555454
Q ss_pred Cceeeccccccc
Q 041467 258 LQLLNIGGNHLQ 269 (746)
Q Consensus 258 L~~L~Ls~N~l~ 269 (746)
|+.|+|++|.+.
T Consensus 105 L~~l~l~~N~~~ 116 (347)
T 2ifg_A 105 LQELVLSGNPLH 116 (347)
T ss_dssp CCEEECCSSCCC
T ss_pred ceEEEeeCCCcc
Confidence 777777777766
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=99.03 E-value=4.9e-08 Score=105.39 Aligned_cols=143 Identities=13% Similarity=0.050 Sum_probs=81.6
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCc---CCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNS---FSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
..|+.+.+..+ ++.+-..+|.++++|+.+.++.|. ++.+-...|.++.+|+.+.+..+ +...-...|..+.+|+.
T Consensus 64 ~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~ 141 (394)
T 4gt6_A 64 YVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDT 141 (394)
T ss_dssp SCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCE
T ss_pred CcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccc
Confidence 34777777654 555666778888888888887664 54334456777777777776543 33333445666677777
Q ss_pred EEccCCCC---cCcccCCCCCCEEeccCCCc----ccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCC
Q 041467 95 LRIDCGGR---IDSLGHLKSLLLLSLAFNQF----LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNN 164 (746)
Q Consensus 95 L~l~~~~~---~~~~~~l~~L~~L~Ls~N~l----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 164 (746)
+.+..+-. ...|.++.+|+.+.+..+-- ..|. ..+|+.+.+..+- +......|.++.+|.......+.
T Consensus 142 i~lp~~~~~I~~~~F~~c~~L~~i~~~~~~~~I~~~aF~-~~~l~~i~ip~~~-~~i~~~af~~c~~l~~~~~~~~~ 216 (394)
T 4gt6_A 142 VTIPEGVTSVADGMFSYCYSLHTVTLPDSVTAIEERAFT-GTALTQIHIPAKV-TRIGTNAFSECFALSTITSDSES 216 (394)
T ss_dssp EECCTTCCEECTTTTTTCTTCCEEECCTTCCEECTTTTT-TCCCSEEEECTTC-CEECTTTTTTCTTCCEEEECCSS
T ss_pred ccccceeeeecccceecccccccccccceeeEecccccc-ccceeEEEECCcc-cccccchhhhccccceecccccc
Confidence 76643211 13455666666666654421 1222 2455666554432 22444556666666665554443
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.98 E-value=5.8e-08 Score=104.84 Aligned_cols=219 Identities=11% Similarity=0.079 Sum_probs=123.5
Q ss_pred cCchhhhCCc-cCcEEecccCcCCccCCccccCCCCCCeeeCcCCC---CCCccchhhcCCCCCCEEEccCCC-C--cCc
Q 041467 33 EIPHQIGRLI-SLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN---LVRDILTEICSLFKLERLRIDCGG-R--IDS 105 (746)
Q Consensus 33 ~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~~~~~~~l~~L~~L~l~~~~-~--~~~ 105 (746)
+-..+|.++. .|+.+.+..+ ++.+-..+|.++.+|+.+.+..|. +...-...|..+.+|+.+.+..+- . ..+
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~~~~I~~~a 132 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDSVTEIDSEA 132 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTTCSEECTTT
T ss_pred cCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCccceehhhh
Confidence 3345677774 5999999754 665667789999999999987764 333334567777777777664321 1 145
Q ss_pred ccCCCCCCEEeccCCCc----ccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccC
Q 041467 106 LGHLKSLLLLSLAFNQF----LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTN 181 (746)
Q Consensus 106 ~~~l~~L~~L~Ls~N~l----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~ 181 (746)
|.++.+|+.+.+..+.- ..|.++.+|+.+.+..+ ++.+...+|.. .+|+.+.+..+-.. .....|.+
T Consensus 133 F~~c~~L~~i~lp~~~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-------i~~~af~~ 203 (394)
T 4gt6_A 133 FHHCEELDTVTIPEGVTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-------IGTNAFSE 203 (394)
T ss_dssp TTTCTTCCEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-------ECTTTTTT
T ss_pred hhhhcccccccccceeeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-------cccchhhh
Confidence 67777888887765433 24566777777777654 44455556654 56777777554321 12234666
Q ss_pred CCCCCEEEcccccccccCChhhhhcc-------------cccceEEcccCcccccCCccccCCCCCCeeecccccceecC
Q 041467 182 CSKLERLYFNRNGFEGVLPHSIANLS-------------STIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI 248 (746)
Q Consensus 182 l~~L~~L~Ls~N~l~~~~p~~~~~l~-------------~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 248 (746)
+.+++......+... .+...+..-. ..+..+.+. +.++.+-..+|.++.+|+.+.+.++.. ..-
T Consensus 204 c~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~ 280 (394)
T 4gt6_A 204 CFALSTITSDSESYP-AIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVV-SIG 280 (394)
T ss_dssp CTTCCEEEECCSSSC-BSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCC-EEC
T ss_pred ccccceecccccccc-cccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccc-eec
Confidence 777777666554432 1111111100 011122221 122223334566666666666644332 244
Q ss_pred CcCCCCCCCCceeecc
Q 041467 249 PPLIGETPNLQLLNIG 264 (746)
Q Consensus 249 p~~~~~l~~L~~L~Ls 264 (746)
...|.++++|+.+.+.
T Consensus 281 ~~aF~~c~~L~~i~l~ 296 (394)
T 4gt6_A 281 TGAFMNCPALQDIEFS 296 (394)
T ss_dssp TTTTTTCTTCCEEECC
T ss_pred CcccccccccccccCC
Confidence 4556666666666654
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.95 E-value=3.1e-10 Score=115.11 Aligned_cols=131 Identities=13% Similarity=0.065 Sum_probs=95.3
Q ss_pred hhcCCCCCCeEe-ecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCc--eeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIR-EGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRN--LIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig-~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~Hpn--Iv~l~~~~~~~~~~~lv 546 (746)
....|.. ..++ .|..+.||+ +++|+.... ....+.+|+++++.+.+.+ +.++++++...+..++|
T Consensus 18 ~~~~~~~-~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 18 RLFGYDW-AQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TTTTCEE-EECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred hcCCCce-EecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 3344443 3344 455689997 677775422 2345789999999997544 55688888887788999
Q ss_pred hhhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 041467 547 FKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHC------------------------------------------- 583 (746)
Q Consensus 547 ~e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~------------------------------------------- 583 (746)
|||+++..+. .+......++.++++.++.||+..
T Consensus 94 ~e~i~G~~l~---~~~~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 94 LGEVPGQDLL---SSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp EECCSSEETT---TSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred EEecCCcccC---cCcCCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 9999988774 222234478889999999999752
Q ss_pred ------------CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 584 ------------QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 584 ------------~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.+.++|+|++|.||++++++.++|+|||.|..
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998776677999999864
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.85 E-value=5.3e-09 Score=111.52 Aligned_cols=132 Identities=17% Similarity=0.258 Sum_probs=100.9
Q ss_pred CCCeEeecCCeeEEE-------EEeehhh--hhh-hhhhHHHHHHHHHhhcCC--CCceeeEEEEEecC---Ccccchhh
Q 041467 484 PANKIREGGFNIVYN-------VAMKVAN--LKQ-KEASRSFAAEFNALRNIR--HRNLIKIITICSSI---DFEGFDFK 548 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~-------vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--HpnIv~l~~~~~~~---~~~~lv~e 548 (746)
..+.++.|.++.||+ +++|+.. ... ......+.+|+++++.+. +..++++++++.+. +..++|||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred eEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 456788999999997 6777764 322 122346889999999997 45688899988776 45789999
Q ss_pred hccCCccc---ccCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 041467 549 AISNGQLR---LCNLSLTQRVNIAIDVAFAIEYLRHHC------------------------------------------ 583 (746)
Q Consensus 549 ~~~~g~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~------------------------------------------ 583 (746)
|+++..+. ...++..++..++.+++++|+.||+..
T Consensus 122 ~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (359)
T 3dxp_A 122 FVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLM 201 (359)
T ss_dssp CCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHH
T ss_pred ecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHH
Confidence 99988774 335678899999999999999999831
Q ss_pred -------------CCCeEEcCCCCCCeeeCCCCc--EEEcccccccc
Q 041467 584 -------------QPSIVHGDLKPSNILLDQDVV--THVGDLGLAKF 615 (746)
Q Consensus 584 -------------~~~ivHrDlkp~NILl~~~~~--~ki~DfGla~~ 615 (746)
.+.++|+|++|.||+++.++. +.|.||+.+..
T Consensus 202 ~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 202 DWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999987653 68999999864
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.80 E-value=2.6e-09 Score=113.26 Aligned_cols=84 Identities=19% Similarity=0.292 Sum_probs=47.3
Q ss_pred CCCCCCEEEccCCCCCCCCCCCccccccc---cCCCCCCEEEccccccccc----CChhhhhcccccceEEcccCccccc
Q 041467 151 RLKNLSWLNLGVNNLGSGTANELDFINLL---TNCSKLERLYFNRNGFEGV----LPHSIANLSSTIKQIAMGSNRISST 223 (746)
Q Consensus 151 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~---~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~~L~~L~l~~N~i~~~ 223 (746)
.+++|++|+|++|.+.. ..+..+ ..+++|++|+|+.|.+.+. ++..+..++ +|+.|++++|.|+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~------~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~-~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQN------VVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIK-HLKFINMKYNYLSDE 322 (362)
T ss_dssp TCTTCCEEEEESCTTHH------HHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHT-TCSEEECCSBBCCHH
T ss_pred CCCCcCEEeCCCCCCch------HHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCC-cceEEECCCCcCCHH
Confidence 35677777777776643 111111 2456777777777777643 233334455 577777777776643
Q ss_pred CCccccC-CCCCCeeeccccc
Q 041467 224 IPHGIRN-LVNLNWLTMESSQ 243 (746)
Q Consensus 224 ~p~~~~~-l~~L~~L~L~~N~ 243 (746)
.-..+.. + ...++++.++
T Consensus 323 ~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 323 MKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHHHc--CCEEEecCCc
Confidence 2222332 2 3556777665
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.75 E-value=9.5e-09 Score=108.88 Aligned_cols=89 Identities=11% Similarity=0.132 Sum_probs=58.2
Q ss_pred CCCCCcEeeCccCcccccCCccc---cCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhh
Q 041467 127 NASSLEMIEFSRNQFSGGVSVDF---SRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSI 203 (746)
Q Consensus 127 ~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 203 (746)
.+++|+.|+|++|.+....+..+ ..+++|++|+|+.|.++..... .++..+..+++|+.|+|++|.++...-..+
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~--~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l 327 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGAR--LLLDHVDKIKHLKFINMKYNYLSDEMKKEL 327 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHH--HHHTTHHHHTTCSEEECCSBBCCHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHH--HHHhhcccCCcceEEECCCCcCCHHHHHHH
Confidence 46788888888888874333233 2578899999999988641100 123334567899999999998874433333
Q ss_pred hhcccccceEEcccCc
Q 041467 204 ANLSSTIKQIAMGSNR 219 (746)
Q Consensus 204 ~~l~~~L~~L~l~~N~ 219 (746)
... ....+++++++
T Consensus 328 ~~a--lg~~~~~~~~~ 341 (362)
T 2ra8_A 328 QKS--LPMKIDVSDSQ 341 (362)
T ss_dssp HHH--CCSEEECCSBC
T ss_pred HHH--cCCEEEecCCc
Confidence 331 13568888887
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=98.64 E-value=3.8e-06 Score=89.95 Aligned_cols=240 Identities=10% Similarity=0.024 Sum_probs=123.0
Q ss_pred cccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCC
Q 041467 13 LCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKL 92 (746)
Q Consensus 13 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 92 (746)
-+....+|+.+.+.. .++.+-..+|.++.+|+.++|..+ ++.+-...|.+. +|+.+.+..+ +...-...|. ..+|
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~-~~~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQ-GTDL 115 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTT-TCCC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceec-cCCc
Confidence 344456777887764 466556667888888888888654 554445566665 6777776543 3222223343 3477
Q ss_pred CEEEccCCCCc---CcccCCCCCCEEeccCCCc----ccccCCCCCcEeeCccCcccc------------cCCccccCCC
Q 041467 93 ERLRIDCGGRI---DSLGHLKSLLLLSLAFNQF----LSLSNASSLEMIEFSRNQFSG------------GVSVDFSRLK 153 (746)
Q Consensus 93 ~~L~l~~~~~~---~~~~~l~~L~~L~Ls~N~l----~~l~~l~~L~~L~Ls~N~l~~------------~~~~~~~~l~ 153 (746)
+.+.+..+-.. .+|.+. +|+...+..+-- ..+.++.+++...+..+.... .....+....
T Consensus 116 ~~i~lp~~~~~i~~~~F~~~-~l~~~~~~~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
T 4h09_A 116 DDFEFPGATTEIGNYIFYNS-SVKRIVIPKSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAK 194 (379)
T ss_dssp SEEECCTTCCEECTTTTTTC-CCCEEEECTTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTC
T ss_pred ccccCCCccccccccccccc-eeeeeeccceeeccccchhcccccccccccccccceeecccceecccccceeccccccc
Confidence 77777542110 223332 344444333211 223445555555554432211 1112233344
Q ss_pred CCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCC
Q 041467 154 NLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVN 233 (746)
Q Consensus 154 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~ 233 (746)
++..+.+..+.-. .....+..+.+|+.+.+..+ +.......+.... .|+.+.+..+ ++.+-..+|.++.+
T Consensus 195 ~~~~~~~~~~~~~-------i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~-~L~~i~lp~~-v~~I~~~aF~~~~~ 264 (379)
T 4h09_A 195 TGTEFTIPSTVKT-------VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMK-ALDEIAIPKN-VTSIGSFLLQNCTA 264 (379)
T ss_dssp CCSEEECCTTCCE-------ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCS-SCCEEEECTT-CCEECTTTTTTCTT
T ss_pred cccccccccceeE-------Eeecccccccccceeeeccc-eeEEccccccCCc-cceEEEcCCC-ccEeCccccceeeh
Confidence 4444444322111 11233455566666666544 3323334444444 5666666554 44444556666667
Q ss_pred CCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 234 LNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 234 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
|+.+.+.. ++.......|.++++|+.+.+.++.++
T Consensus 265 l~~i~l~~-~i~~i~~~aF~~c~~L~~i~l~~~~i~ 299 (379)
T 4h09_A 265 LKTLNFYA-KVKTVPYLLCSGCSNLTKVVMDNSAIE 299 (379)
T ss_dssp CCEEEECC-CCSEECTTTTTTCTTCCEEEECCTTCC
T ss_pred hccccccc-cceeccccccccccccccccccccccc
Confidence 77766643 344444456666777777766665554
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=98.60 E-value=4.3e-06 Score=89.54 Aligned_cols=291 Identities=12% Similarity=0.065 Sum_probs=160.4
Q ss_pred hhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCC-Cc--CcccCCCCC
Q 041467 36 HQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGG-RI--DSLGHLKSL 112 (746)
Q Consensus 36 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~-~~--~~~~~l~~L 112 (746)
+++....+|+.+.+.. .++.+-..+|.++.+|+.++|..+ +...-...|.+. +|+.+.+..+- .+ .+|.+ .+|
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~l~~I~~~aF~~-~~L 115 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMERVKKFGDYVFQG-TDL 115 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTTCCEECTTTTTT-CCC
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCceeeEeccceecc-CCc
Confidence 3566778899999875 456455667999999999999654 544444556665 57766654311 11 23443 367
Q ss_pred CEEeccCCCc----ccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCC------ccccccccCC
Q 041467 113 LLLSLAFNQF----LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANE------LDFINLLTNC 182 (746)
Q Consensus 113 ~~L~Ls~N~l----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~------~~~~~~~~~l 182 (746)
+.+.+..+-. ..|.+. +|+.+.+..+ ++.+....|..+.+++.+.+..+......... ......+..+
T Consensus 116 ~~i~lp~~~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (379)
T 4h09_A 116 DDFEFPGATTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAA 193 (379)
T ss_dssp SEEECCTTCCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTT
T ss_pred ccccCCCccccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccc
Confidence 7777765432 123332 4555554433 44455566777777777776654332110000 0011123333
Q ss_pred CCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceee
Q 041467 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLN 262 (746)
Q Consensus 183 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 262 (746)
..+..+.+..+.- ......+.... .|+.+.+..+ +..+....|.++..|+.+.+..+ ++..-...|.++.+|+.+.
T Consensus 194 ~~~~~~~~~~~~~-~i~~~~f~~~~-~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~ 269 (379)
T 4h09_A 194 KTGTEFTIPSTVK-TVTAYGFSYGK-NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLN 269 (379)
T ss_dssp CCCSEEECCTTCC-EECTTTTTTCS-SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccee-EEeeccccccc-ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccc
Confidence 4444444433221 12222333332 4555555433 22233445555566666655443 4434444555555565555
Q ss_pred cccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccC
Q 041467 263 IGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSL 342 (746)
Q Consensus 263 Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~ 342 (746)
+..+ +.......|.+|.+|+.+.+.++.++..-+..|.++.+| +.++|..+ ++..-
T Consensus 270 l~~~----------------------i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L-~~i~lp~~-l~~I~ 325 (379)
T 4h09_A 270 FYAK----------------------VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKL-SSVTLPTA-LKTIQ 325 (379)
T ss_dssp ECCC----------------------CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTC-CEEECCTT-CCEEC
T ss_pred cccc----------------------ceeccccccccccccccccccccccceehhhhhcCCCCC-CEEEcCcc-ccEEH
Confidence 5332 222334567888889999888888874445566777888 57888655 55344
Q ss_pred chhhhcccCCceeecCCC
Q 041467 343 PPEVGNLKNLLRLHIPEY 360 (746)
Q Consensus 343 p~~~~~l~~L~~L~lp~~ 360 (746)
..+|.++++|+.+.+|+.
T Consensus 326 ~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 326 VYAFKNCKALSTISYPKS 343 (379)
T ss_dssp TTTTTTCTTCCCCCCCTT
T ss_pred HHHhhCCCCCCEEEECCc
Confidence 567778888888877764
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.48 E-value=4.5e-07 Score=94.04 Aligned_cols=130 Identities=22% Similarity=0.288 Sum_probs=98.0
Q ss_pred CCCeEeecCCeeEEE----EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCc--eeeEEEEEecCC---cccchhhhccCC
Q 041467 484 PANKIREGGFNIVYN----VAMKVANLKQKEASRSFAAEFNALRNIR-HRN--LIKIITICSSID---FEGFDFKAISNG 553 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~----vavK~~~~~~~~~~~~~~~E~~~l~~l~-Hpn--Iv~l~~~~~~~~---~~~lv~e~~~~g 553 (746)
..+.++.|....||+ +++|+-... .....+.+|+++++.+. +.. +.+.+......+ ..|+||+++++.
T Consensus 24 ~i~~~~~G~~n~v~~v~~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~ 101 (304)
T 3sg8_A 24 TIEISGEGNDCIAYEINRDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGV 101 (304)
T ss_dssp CCCEEEECSSEEEEESTTSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCE
T ss_pred eeEecCCCCcceEEEECCEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCe
Confidence 456799999999997 778875422 33467899999998884 332 445555544333 457889999987
Q ss_pred ccc---ccCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 041467 554 QLR---LCNLSLTQRVNIAIDVAFAIEYLRHHC----------------------------------------------- 583 (746)
Q Consensus 554 ~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~----------------------------------------------- 583 (746)
.+. ...++..++..++.++++.++.||+..
T Consensus 102 ~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 181 (304)
T 3sg8_A 102 PLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDIL 181 (304)
T ss_dssp ECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred ECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHH
Confidence 775 245788889999999999999999711
Q ss_pred --------CCCeEEcCCCCCCeeeCC--CCcEEEcccccccc
Q 041467 584 --------QPSIVHGDLKPSNILLDQ--DVVTHVGDLGLAKF 615 (746)
Q Consensus 584 --------~~~ivHrDlkp~NILl~~--~~~~ki~DfGla~~ 615 (746)
.+.++|+|++|.||++++ ...+.|+||+.+..
T Consensus 182 ~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 182 ENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp TCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred hccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 135899999999999987 45688999998865
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.35 E-value=1.3e-07 Score=90.32 Aligned_cols=66 Identities=17% Similarity=0.267 Sum_probs=36.3
Q ss_pred CCCcEeeCccCccccc----CCccccCCCCCCEEEc--cCCCCCCCCCCCccccccccCCCCCCEEEccccccc
Q 041467 129 SSLEMIEFSRNQFSGG----VSVDFSRLKNLSWLNL--GVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFE 196 (746)
Q Consensus 129 ~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L--s~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 196 (746)
++|++|+|++|.|+.. +...+...++|++|+| ++|.|+.... ..+...+...++|++|+|++|.+.
T Consensus 93 ~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~--~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 93 NTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVE--MEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp SSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHH--HHHHHHHHHCSSCCEEECCCSSHH
T ss_pred CCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHH--HHHHHHHHhCCCcCEEeccCCCCC
Confidence 3445555555555432 2233445566777777 6676653100 013344556677888888888775
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.33 E-value=3.9e-07 Score=91.52 Aligned_cols=64 Identities=25% Similarity=0.259 Sum_probs=35.3
Q ss_pred cccccEEecccCcCcc--cCchhhhCCccCcEEecccCcCCccCCccccCCC--CCCeeeCcCCCCCCcc
Q 041467 17 RTFLRYINLVNNGFNG--EIPHQIGRLISLERLILSNNSFSCAIPANLSSGS--NLIKLSTDSNNLVRDI 82 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~ 82 (746)
+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTF 236 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGC
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcccc
Confidence 4556666666666654 3345555666666666666666543 2233333 5666666666655433
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.31 E-value=1.6e-07 Score=89.57 Aligned_cols=112 Identities=12% Similarity=0.089 Sum_probs=62.5
Q ss_pred ccCCCCCCEEeccCC-Ccc---------cccCCCCCcEeeCccCcccccC----CccccCCCCCCEEEccCCCCCCCCCC
Q 041467 106 LGHLKSLLLLSLAFN-QFL---------SLSNASSLEMIEFSRNQFSGGV----SVDFSRLKNLSWLNLGVNNLGSGTAN 171 (746)
Q Consensus 106 ~~~l~~L~~L~Ls~N-~l~---------~l~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~ 171 (746)
+...++|+.|+|++| .+. .+...++|++|+|++|+|.... ...+...++|++|+|++|.|+...
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g-- 109 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG-- 109 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH--
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH--
Confidence 455667777777777 662 2445667777777777775321 223344567777777777775311
Q ss_pred CccccccccCCCCCCEEEc--ccccccccCC----hhhhhcccccceEEcccCcc
Q 041467 172 ELDFINLLTNCSKLERLYF--NRNGFEGVLP----HSIANLSSTIKQIAMGSNRI 220 (746)
Q Consensus 172 ~~~~~~~~~~l~~L~~L~L--s~N~l~~~~p----~~~~~l~~~L~~L~l~~N~i 220 (746)
...+...+...++|++|+| ++|.|...-. ..+.... .|++|++++|.+
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~-~L~~L~L~~n~i 163 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNT-TLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCS-SCCEEECCCSSH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCC-CcCEEeccCCCC
Confidence 0113444556666777777 6676653211 2222222 355555555554
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.31 E-value=3.5e-07 Score=91.88 Aligned_cols=80 Identities=24% Similarity=0.326 Sum_probs=46.0
Q ss_pred EeccCCCcccc--------cCCCCCcEeeCccCcccc--cCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCC
Q 041467 115 LSLAFNQFLSL--------SNASSLEMIEFSRNQFSG--GVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSK 184 (746)
Q Consensus 115 L~Ls~N~l~~l--------~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~ 184 (746)
++++.|+...+ .++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. .....+..+ +
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-----~~l~~l~~l-~ 221 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-----RELDKIKGL-K 221 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-----GGGGGGTTS-C
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-----hhhhhcccC-C
Confidence 55666654222 246677777777777766 3345555677777777777777652 111223333 6
Q ss_pred CCEEEcccccccccCC
Q 041467 185 LERLYFNRNGFEGVLP 200 (746)
Q Consensus 185 L~~L~Ls~N~l~~~~p 200 (746)
|++|+|++|.+.+.+|
T Consensus 222 L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 222 LEELWLDGNSLCDTFR 237 (267)
T ss_dssp CSEEECTTSTTGGGCS
T ss_pred cceEEccCCcCccccC
Confidence 6666666666665544
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=7e-06 Score=85.03 Aligned_cols=130 Identities=18% Similarity=0.239 Sum_probs=96.4
Q ss_pred CCCeEeecCCeeEEE----EEeehhhhhhhhhhHHHHHHHHHhhcCCCC---ceeeEEEEEe-cCCcccchhhhccCCcc
Q 041467 484 PANKIREGGFNIVYN----VAMKVANLKQKEASRSFAAEFNALRNIRHR---NLIKIITICS-SIDFEGFDFKAISNGQL 555 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~----vavK~~~~~~~~~~~~~~~E~~~l~~l~Hp---nIv~l~~~~~-~~~~~~lv~e~~~~g~l 555 (746)
..+.++.|....||+ +++|+-. .......+.+|+++|+.+.+. -|.+.+.++. ..+..+++||++++..+
T Consensus 23 ~v~~l~~G~~n~v~~vg~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l 100 (306)
T 3tdw_A 23 SVESLGEGFRNYAILVNGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQIL 100 (306)
T ss_dssp CEEEEEECSSEEEEEETTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEEC
T ss_pred eeeecCCCcceeEEEECCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeEC
Confidence 356788888889998 6777642 223356789999999999752 3566777764 44567899999988776
Q ss_pred c---ccCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------------
Q 041467 556 R---LCNLSLTQRVNIAIDVAFAIEYLRHHC------------------------------------------------- 583 (746)
Q Consensus 556 ~---~~~l~~~~~~~i~~~i~~~l~yLH~~~------------------------------------------------- 583 (746)
. ...++..++..++.++++.++.||+..
T Consensus 101 ~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l 180 (306)
T 3tdw_A 101 GEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYM 180 (306)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHH
T ss_pred chhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHH
Confidence 4 234567778888888888888888632
Q ss_pred --------CCCeEEcCCCCCCeeeCC---CCc-EEEcccccccc
Q 041467 584 --------QPSIVHGDLKPSNILLDQ---DVV-THVGDLGLAKF 615 (746)
Q Consensus 584 --------~~~ivHrDlkp~NILl~~---~~~-~ki~DfGla~~ 615 (746)
.+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 181 ~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 181 THPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred hCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 234699999999999987 455 48999998865
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=1.5e-05 Score=80.94 Aligned_cols=127 Identities=17% Similarity=0.142 Sum_probs=88.9
Q ss_pred CeEeecCCe-eEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchhhhccCCc
Q 041467 486 NKIREGGFN-IVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKAISNGQ 554 (746)
Q Consensus 486 ~~ig~g~~g-~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~e~~~~g~ 554 (746)
+.+..|..| .||+ +.+|+-. ......+.+|+++|+.+. +--|.++++++.+.+..++|||++++..
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~---~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGK---GSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEE---THHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECC---CCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 345556555 5886 4566543 223456888999998885 3236778899988888999999998776
Q ss_pred ccc-cCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------------
Q 041467 555 LRL-CNLSLTQRVNIAIDVAFAIEYLRHHC-------------------------------------------------- 583 (746)
Q Consensus 555 l~~-~~l~~~~~~~i~~~i~~~l~yLH~~~-------------------------------------------------- 583 (746)
+.. ......+...++.+++..++-||+..
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 186 (272)
T 4gkh_A 107 AFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKL 186 (272)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTT
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhc
Confidence 541 11123344567777777777777521
Q ss_pred -----CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 584 -----QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 584 -----~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.+.++|+|+.+.||++++++.+-|.||+.+..
T Consensus 187 ~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 187 LPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 01378999999999999877777999998864
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=4.3e-05 Score=80.89 Aligned_cols=103 Identities=14% Similarity=0.127 Sum_probs=70.4
Q ss_pred HHHHHHHHHhhcCC-C--CceeeEEEEEecC---CcccchhhhccCCccccc-----------CCCHHHHHHHHHHHHHH
Q 041467 513 RSFAAEFNALRNIR-H--RNLIKIITICSSI---DFEGFDFKAISNGQLRLC-----------NLSLTQRVNIAIDVAFA 575 (746)
Q Consensus 513 ~~~~~E~~~l~~l~-H--pnIv~l~~~~~~~---~~~~lv~e~~~~g~l~~~-----------~l~~~~~~~i~~~i~~~ 575 (746)
..+.+|+++++.+. + -.+.++++++.+. +..++|||++++..+... .++..++..++.++++.
T Consensus 72 ~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 151 (357)
T 3ats_A 72 YRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAA 151 (357)
T ss_dssp CCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHH
Confidence 45788999998885 3 3477788887665 356789999987665421 23444444455555554
Q ss_pred HHHHHh------------------------------------------------------c-------CCCCeEEcCCCC
Q 041467 576 IEYLRH------------------------------------------------------H-------CQPSIVHGDLKP 594 (746)
Q Consensus 576 l~yLH~------------------------------------------------------~-------~~~~ivHrDlkp 594 (746)
++-||+ . ..+.++|+|+.|
T Consensus 152 La~LH~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l~HgDl~~ 231 (357)
T 3ats_A 152 LATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARV 231 (357)
T ss_dssp HHHHTTCSSHHHHTGGGC-----CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCCEEECSSCSG
T ss_pred HHHHhCCCCccCChhhccCCCCCCchHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCceEEeCCCCC
Confidence 444442 1 134789999999
Q ss_pred CCeeeCCCCcEEEcccccccc
Q 041467 595 SNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 595 ~NILl~~~~~~ki~DfGla~~ 615 (746)
.||+++++..+.|+||+.|..
T Consensus 232 ~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 232 GNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp GGEEEETTEEEEECCGGGCEE
T ss_pred CeEEEeCCcEEEEEccccccc
Confidence 999999654578999998864
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.44 E-value=6.8e-05 Score=69.68 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=15.1
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccC
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNN 52 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 52 (746)
|+.|||+++.++..--..+.++++|++|+|++|
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 445555555444332233444444555555544
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.42 E-value=7.4e-05 Score=69.45 Aligned_cols=93 Identities=10% Similarity=0.101 Sum_probs=51.0
Q ss_pred CchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCC-CCCccchhhcCC----CCCCEEEccCCCCcCcccC
Q 041467 34 IPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN-LVRDILTEICSL----FKLERLRIDCGGRIDSLGH 108 (746)
Q Consensus 34 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~l~~~~~~~~~~~ 108 (746)
+|.....-..|++||||++.|+..--..+.++++|+.|+|++|. ++..--..+..+ ++|++|+|+++..+..
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD--- 129 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTD--- 129 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCH---
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCH---
Confidence 34433233468888888888875544556778888888888875 333222334433 1344554444322210
Q ss_pred CCCCCEEeccCCCcccccCCCCCcEeeCccCc
Q 041467 109 LKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQ 140 (746)
Q Consensus 109 l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~ 140 (746)
..+..+..+++|+.|+|+++.
T Consensus 130 -----------~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 130 -----------KGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp -----------HHHHHGGGCTTCCEEEEESCT
T ss_pred -----------HHHHHHhcCCCCCEEECCCCC
Confidence 001234556666666666653
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00063 Score=70.07 Aligned_cols=125 Identities=20% Similarity=0.225 Sum_probs=83.6
Q ss_pred CCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCC---CCceeeEEEEEecCCcccchhhhccC
Q 041467 483 SPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIR---HRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
...+.|+.|....+|+ +++|+.... ....+.+|++.|+.+. ..-|++.++++...+..++|||++++
T Consensus 39 ~~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLINDEVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp CEEEEECCSSSSEEEEEESSSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeeEEeCCccceeeeEEEECCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 3456788899999997 577765422 3456889999998885 35688888888887889999999987
Q ss_pred Cccc------------------c-cC-------------------CCHHHHH---HHHHHH-------------HHHH--
Q 041467 553 GQLR------------------L-CN-------------------LSLTQRV---NIAIDV-------------AFAI-- 576 (746)
Q Consensus 553 g~l~------------------~-~~-------------------l~~~~~~---~i~~~i-------------~~~l-- 576 (746)
.... . .. -+|.... ++..++ .+.+
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 6541 0 00 1343321 111111 1112
Q ss_pred --HHHHh-cCCCCeEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 577 --EYLRH-HCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 577 --~yLH~-~~~~~ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
+.|.. ...|.++|+|+.+.||+++.++ +.|.||+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23321 2356899999999999999887 8899984
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00051 Score=71.93 Aligned_cols=44 Identities=25% Similarity=0.272 Sum_probs=34.7
Q ss_pred HHHHHHHHHh----------cCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 572 VAFAIEYLRH----------HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 572 i~~~l~yLH~----------~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
+..++++|+. ...+.++|+|+++.||+++.++.+.|+||+.+..
T Consensus 199 ~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 199 GLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 4446677763 1245899999999999998888999999998754
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00026 Score=76.09 Aligned_cols=66 Identities=17% Similarity=0.185 Sum_probs=42.7
Q ss_pred CCeEeecCCeeEEE---------EEeehhhhhhh-------hhhHHHHHHHHHhhcCCC--Cc-eeeEEEEEecCCcccc
Q 041467 485 ANKIREGGFNIVYN---------VAMKVANLKQK-------EASRSFAAEFNALRNIRH--RN-LIKIITICSSIDFEGF 545 (746)
Q Consensus 485 ~~~ig~g~~g~v~~---------vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H--pn-Iv~l~~~~~~~~~~~l 545 (746)
.+.+|.|..+.||+ |+||....... ....++.+|+++++.+.+ |. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 56789999999997 56775431110 123457889999888742 33 4456654 3445678
Q ss_pred hhhhccC
Q 041467 546 DFKAISN 552 (746)
Q Consensus 546 v~e~~~~ 552 (746)
|||++++
T Consensus 113 vmE~l~g 119 (397)
T 2olc_A 113 VMEDLSH 119 (397)
T ss_dssp EECCCTT
T ss_pred EEEeCCC
Confidence 9999865
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00055 Score=64.81 Aligned_cols=83 Identities=11% Similarity=0.069 Sum_probs=38.2
Q ss_pred CCCCCEEeccCC-Ccc---------cccCCCCCcEeeCccCcccccCCcc----ccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 109 LKSLLLLSLAFN-QFL---------SLSNASSLEMIEFSRNQFSGGVSVD----FSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 109 l~~L~~L~Ls~N-~l~---------~l~~l~~L~~L~Ls~N~l~~~~~~~----~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
-+.|+.|+|++| ++. .+..-+.|+.|+|++|+|....-.. +..-+.|+.|+|+.|.|+... ...
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G--a~a 117 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL--LAR 117 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH--HHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH--HHH
Confidence 345556666553 541 2334455666666666655322111 223355666666666654310 011
Q ss_pred ccccccCCCCCCEEEcccc
Q 041467 175 FINLLTNCSKLERLYFNRN 193 (746)
Q Consensus 175 ~~~~~~~l~~L~~L~Ls~N 193 (746)
+.+.+..-+.|++|+|++|
T Consensus 118 la~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHTTTTCCCSEEECCCC
T ss_pred HHHHHhhCCceeEEECCCC
Confidence 2233334445566666543
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00062 Score=64.46 Aligned_cols=92 Identities=14% Similarity=0.128 Sum_probs=59.1
Q ss_pred cccCCCCCCEEeccCCCccc---------ccCCCCCcEeeCccCcccccCC----ccccCCCCCCEEEccCCCC-CCCCC
Q 041467 105 SLGHLKSLLLLSLAFNQFLS---------LSNASSLEMIEFSRNQFSGGVS----VDFSRLKNLSWLNLGVNNL-GSGTA 170 (746)
Q Consensus 105 ~~~~l~~L~~L~Ls~N~l~~---------l~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l-~~~~~ 170 (746)
.+..-+.|+.|+|++|++.. +..-+.|+.|+|+.|+|...-- ..+..-+.|++|+|++|.. .-+..
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~ 144 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQ 144 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHH
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHH
Confidence 45556788888888888832 3345789999999999874322 2344557799999986533 11000
Q ss_pred CCccccccccCCCCCCEEEccccccc
Q 041467 171 NELDFINLLTNCSKLERLYFNRNGFE 196 (746)
Q Consensus 171 ~~~~~~~~~~~l~~L~~L~Ls~N~l~ 196 (746)
....+.+.+..-+.|+.|+++.|.+.
T Consensus 145 g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 145 VEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 01123344556678889999887653
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0046 Score=66.74 Aligned_cols=31 Identities=29% Similarity=0.572 Sum_probs=27.4
Q ss_pred CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 584 ~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.+.++|+|++|.||+++.++ ++|.||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 45899999999999998776 99999998865
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0027 Score=65.81 Aligned_cols=146 Identities=14% Similarity=0.127 Sum_probs=78.7
Q ss_pred CcccHHHHhhhhcCCCC-----CCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCc--eeeE
Q 041467 468 PMISHAELSKATNNFSP-----ANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRN--LIKI 533 (746)
Q Consensus 468 ~~~~~~~~~~~~~~~~~-----~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~Hpn--Iv~l 533 (746)
..++.+++......|.. .+.|+.|....+|+ +++|+.... .....+..|+++++.+.... +.++
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCccEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 34555666665555654 23455677788887 567766431 12234667888777764222 2333
Q ss_pred EEE------EecCCcccchhhhccCCccc--------------------ccCC-----------CHHHHHH---------
Q 041467 534 ITI------CSSIDFEGFDFKAISNGQLR--------------------LCNL-----------SLTQRVN--------- 567 (746)
Q Consensus 534 ~~~------~~~~~~~~lv~e~~~~g~l~--------------------~~~l-----------~~~~~~~--------- 567 (746)
+.. ....+..+.+++++++..+. ...+ .|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 11123456788888765431 0000 1211000
Q ss_pred ---HHHHHHHHHHHHHhcC----CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 568 ---IAIDVAFAIEYLRHHC----QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 568 ---i~~~i~~~l~yLH~~~----~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
+...+...++++++.. ...++|+|+.+.||++++++.+.|+||+.+..
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 0012344556665431 24799999999999998776668999998754
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0028 Score=55.90 Aligned_cols=56 Identities=16% Similarity=0.295 Sum_probs=45.3
Q ss_pred cEEecccCcCc-ccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCC
Q 041467 21 RYINLVNNGFN-GEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNL 78 (746)
Q Consensus 21 ~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 78 (746)
..++.++++++ ..+|..+. .+|++|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 48899999986 36775543 3699999999999976667788899999999999966
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0035 Score=55.26 Aligned_cols=36 Identities=25% Similarity=0.207 Sum_probs=16.9
Q ss_pred CCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccc
Q 041467 154 NLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGF 195 (746)
Q Consensus 154 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 195 (746)
+|++|+|++|+|+.++. ..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~------~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPP------GLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCT------TTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccCh------hhhhhccccCEEEecCCCe
Confidence 35555555555544222 2234445555555555544
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0034 Score=63.94 Aligned_cols=69 Identities=9% Similarity=-0.009 Sum_probs=45.1
Q ss_pred CCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCC--C-ceeeEEEEEecCCcccchhhhc
Q 041467 482 FSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRH--R-NLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~H--p-nIv~l~~~~~~~~~~~lv~e~~ 550 (746)
....+.+|.|..+.||+ |.+|+-..........|.+|++.|+.+.- + -+++.+++. ..++|||++
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence 44567889999999998 67786543333333458899999888742 1 244555542 346778887
Q ss_pred cCCc
Q 041467 551 SNGQ 554 (746)
Q Consensus 551 ~~g~ 554 (746)
..+.
T Consensus 93 ~~~~ 96 (288)
T 3f7w_A 93 DERP 96 (288)
T ss_dssp CCCC
T ss_pred cccC
Confidence 5543
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0059 Score=62.56 Aligned_cols=125 Identities=14% Similarity=0.079 Sum_probs=76.2
Q ss_pred CCCCCeEeecCCeeEEE---EEeehhhhhhhhhhHHHHHHHHHhhcCCCCce-eeEEEEEecCCcccchhhhc-cCCccc
Q 041467 482 FSPANKIREGGFNIVYN---VAMKVANLKQKEASRSFAAEFNALRNIRHRNL-IKIITICSSIDFEGFDFKAI-SNGQLR 556 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnI-v~l~~~~~~~~~~~lv~e~~-~~g~l~ 556 (746)
+...+.++.|....+|+ +.+|+..... .......+|+.+++.+..-.+ .++++++ .+.-++++||+ ++..+.
T Consensus 20 ~~~i~~l~gG~tN~~~~~~~~vlR~~~~~~-~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~l~ 96 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRAGDLCLRIPGKGT-EEYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQTMS 96 (301)
T ss_dssp CCSCEEEESCSSEEEEEETTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEECC
T ss_pred ccceeEcCCccccccceeeeEEEECCCCCc-cceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCccCC
Confidence 33478898899999998 4555443221 111123568888877753222 4555543 33457889999 443332
Q ss_pred ccCCCHHHH---HHHHHHHHHHHHHHHhcC--------------------------------------------------
Q 041467 557 LCNLSLTQR---VNIAIDVAFAIEYLRHHC-------------------------------------------------- 583 (746)
Q Consensus 557 ~~~l~~~~~---~~i~~~i~~~l~yLH~~~-------------------------------------------------- 583 (746)
.... ..++.++++.++-+|+..
T Consensus 97 -----~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 171 (301)
T 3dxq_A 97 -----PEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPL 171 (301)
T ss_dssp -----HHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCC
T ss_pred -----HhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCC
Confidence 2111 224555666666666531
Q ss_pred CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 584 ~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.+.++|+|+.|.||+ ..++.+.++||..|..
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 123799999999999 5567889999988764
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=95.36 E-value=0.008 Score=64.94 Aligned_cols=30 Identities=30% Similarity=0.434 Sum_probs=24.8
Q ss_pred CeEEcCCCCCCeeeCCC----------------------------CcEEEcccccccc
Q 041467 586 SIVHGDLKPSNILLDQD----------------------------VVTHVGDLGLAKF 615 (746)
Q Consensus 586 ~ivHrDlkp~NILl~~~----------------------------~~~ki~DfGla~~ 615 (746)
.++|+|+.+.||+++++ +.+.|+||..|..
T Consensus 250 v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~ 307 (429)
T 1nw1_A 250 TFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASY 307 (429)
T ss_dssp EEECSCCCGGGEEEEC------------------------------CCEECCCTTCEE
T ss_pred EEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCc
Confidence 68999999999999875 6789999988754
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.029 Score=60.89 Aligned_cols=66 Identities=18% Similarity=0.122 Sum_probs=35.9
Q ss_pred CCeEeecCCeeEEEEE---------eehhhhhhhhhhHHHHHHHHHhhcCCCCce-eeEEEEEecCCcccchhhhccCCc
Q 041467 485 ANKIREGGFNIVYNVA---------MKVANLKQKEASRSFAAEFNALRNIRHRNL-IKIITICSSIDFEGFDFKAISNGQ 554 (746)
Q Consensus 485 ~~~ig~g~~g~v~~va---------vK~~~~~~~~~~~~~~~E~~~l~~l~HpnI-v~l~~~~~~~~~~~lv~e~~~~g~ 554 (746)
.+.|+.|-...+|+|. +|+.... ....-.-.+|..+++.+...++ .++++.+.. +.||||+++..
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~-~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPK-TDEIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC--CCSCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCC-hhhhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence 4566667777888743 3332211 1111112589999988864444 567776632 35888887644
Q ss_pred c
Q 041467 555 L 555 (746)
Q Consensus 555 l 555 (746)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=95.21 E-value=0.015 Score=61.42 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=62.6
Q ss_pred hHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchhhhccCCcccc---------------------------cCCC--
Q 041467 512 SRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKAISNGQLRL---------------------------CNLS-- 561 (746)
Q Consensus 512 ~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~~---------------------------~~l~-- 561 (746)
.....+|.++++.+. +.-..++++.+.. .+||||+++..+.. ....
T Consensus 97 ~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l 172 (379)
T 3feg_A 97 VDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWL 172 (379)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccH
Confidence 345678999998885 3333566766643 38899987654420 0111
Q ss_pred HHHHHHHHHHHHH-------------------HHHHHHh----c-CCCCeEEcCCCCCCeeeCCC----CcEEEcccccc
Q 041467 562 LTQRVNIAIDVAF-------------------AIEYLRH----H-CQPSIVHGDLKPSNILLDQD----VVTHVGDLGLA 613 (746)
Q Consensus 562 ~~~~~~i~~~i~~-------------------~l~yLH~----~-~~~~ivHrDlkp~NILl~~~----~~~ki~DfGla 613 (746)
+.++.++..++.. .++.|.. . ....++|+|+.+.||+++.+ +.+.++||..|
T Consensus 173 ~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a 252 (379)
T 3feg_A 173 FGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYS 252 (379)
T ss_dssp HHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTC
T ss_pred HHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccC
Confidence 3444444443321 2333322 1 22368999999999999876 78999999987
Q ss_pred cc
Q 041467 614 KF 615 (746)
Q Consensus 614 ~~ 615 (746)
..
T Consensus 253 ~~ 254 (379)
T 3feg_A 253 SY 254 (379)
T ss_dssp EE
T ss_pred Cc
Confidence 64
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=95.09 E-value=0.036 Score=57.25 Aligned_cols=29 Identities=34% Similarity=0.314 Sum_probs=25.2
Q ss_pred CCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 585 ~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
..++|+|+++.||+++ + .+.|+||+.+..
T Consensus 195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 195 VLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred eeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 4688999999999999 4 899999988754
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=94.30 E-value=0.036 Score=58.43 Aligned_cols=30 Identities=23% Similarity=0.365 Sum_probs=24.7
Q ss_pred CCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 585 ~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
..++|+|+.+.||++++++ +.++||..|..
T Consensus 212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~ 241 (369)
T 3c5i_A 212 IVFCHNDLQENNIINTNKC-LRLIDFEYSGF 241 (369)
T ss_dssp EEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred eEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence 3689999999999998654 89999987753
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=93.65 E-value=0.055 Score=56.32 Aligned_cols=31 Identities=16% Similarity=0.273 Sum_probs=27.7
Q ss_pred CCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 585 ~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
..++|+|+.+.||++++++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999987764
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=88.34 E-value=0.31 Score=52.05 Aligned_cols=30 Identities=20% Similarity=0.285 Sum_probs=26.4
Q ss_pred CCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 585 ~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
..++|+|+.+.||+ +.++.+.++||..|..
T Consensus 262 ~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 262 LVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp EEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 36899999999999 7788999999988864
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=86.46 E-value=0.62 Score=47.92 Aligned_cols=32 Identities=28% Similarity=0.293 Sum_probs=27.7
Q ss_pred CCCeEEcCCCCCCeeeCCC----CcEEEcccccccc
Q 041467 584 QPSIVHGDLKPSNILLDQD----VVTHVGDLGLAKF 615 (746)
Q Consensus 584 ~~~ivHrDlkp~NILl~~~----~~~ki~DfGla~~ 615 (746)
.+.++|||+.+.||+++.+ +.+.|.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 4479999999999999874 6899999998865
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 746 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-26 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 2e-26 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-25 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 6e-23 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-22 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 5e-22 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 5e-22 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 5e-22 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 6e-22 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 7e-22 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-21 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 2e-21 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-21 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 3e-21 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 7e-21 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-20 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 3e-20 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-20 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 3e-20 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 9e-20 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 2e-19 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 4e-19 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 7e-19 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-18 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-18 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 3e-18 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 3e-18 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-18 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 3e-17 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 6e-17 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 7e-17 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-16 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-16 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-16 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-16 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 3e-16 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 5e-16 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 6e-16 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 1e-15 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 2e-15 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 3e-15 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 4e-15 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 7e-15 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 7e-15 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 8e-15 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 1e-14 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-14 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-14 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 6e-14 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 6e-14 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 2e-13 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 8e-13 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 9e-13 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 1e-12 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-12 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-12 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 5e-12 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 8e-12 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 5e-11 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-06 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-05 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 8e-11 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-07 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-06 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 7e-06 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-10 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-10 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 5e-10 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 6e-10 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 9e-10 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 5e-07 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 8e-07 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-09 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-07 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 0.004 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 7e-09 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 7e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.004 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.004 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 8e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.002 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.002 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.003 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 0.003 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (268), Expect = 2e-26
Identities = 43/198 (21%), Positives = 81/198 (40%), Gaps = 24/198 (12%)
Query: 480 NNFSPANKIREGGFNIVY------NVAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLI 531
+ +I G F VY +VA+K+ N+ + ++F E LR RH N++
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 532 KIITICSSIDFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQP 585
+ ++ + L + + ++IA A ++YL
Sbjct: 68 LFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS-- 124
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLK +NI L +D+ +GD GLA + E ++G++ ++AP +
Sbjct: 125 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ------LSGSILWMAPEV 177
Query: 646 IAARNLENREKRHTVMSF 663
I ++ + V +F
Sbjct: 178 IRMQDKNPYSFQSDVYAF 195
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 107 bits (269), Expect = 2e-26
Identities = 46/204 (22%), Positives = 79/204 (38%), Gaps = 34/204 (16%)
Query: 471 SHAELSKATNNFSPA---------NKIREGGFNIVY------------NVAMKVANLKQK 509
+ + ++A F+ I G F V VA+K
Sbjct: 8 TFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT 67
Query: 510 E-ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNL------SL 562
E R F +E + + H N+I + + + + + NG L ++
Sbjct: 68 EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV 127
Query: 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622
Q V + +A ++YL VH DL NIL++ ++V V D GL++FL E
Sbjct: 128 IQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFL---EDD 181
Query: 623 TTAETASSSIGINGTVGYVAPVII 646
T+ T +S++G + + AP I
Sbjct: 182 TSDPTYTSALGGKIPIRWTAPEAI 205
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (262), Expect = 2e-25
Identities = 34/187 (18%), Positives = 67/187 (35%), Gaps = 27/187 (14%)
Query: 475 LSKATNNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRS-FAAEFNALRN 524
+ ++F +++ G +V+ +A K+ +L+ K A R+ E L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAISNGQLRLC-----NLSLTQRVNIAIDVAFAIEYL 579
++ S + + G L + ++I V + YL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 580 RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
+ I+H D+KPSNIL++ + D G++ L + GT
Sbjct: 121 --REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----------GTRS 168
Query: 640 YVAPVII 646
Y++P +
Sbjct: 169 YMSPERL 175
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.5 bits (242), Expect = 6e-23
Identities = 39/182 (21%), Positives = 73/182 (40%), Gaps = 27/182 (14%)
Query: 480 NNFSPANKIREGGFNIVY--------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLI 531
+ K+ +G F V+ VA+K + +F E ++ +RH L+
Sbjct: 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLV 75
Query: 532 KIITICSSIDFEGFDFKAISNGQLRLCNLS-------LTQRVNIAIDVAFAIEYLRHHCQ 584
++ + S + + +S G L L Q V++A +A + Y+
Sbjct: 76 QLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN- 133
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPV 644
VH DL+ +NIL+ +++V V D GLA+ + E ++ G + + AP
Sbjct: 134 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNE-------YTARQGAKFPIKWTAPE 184
Query: 645 II 646
Sbjct: 185 AA 186
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.8 bits (235), Expect = 3e-22
Identities = 35/181 (19%), Positives = 71/181 (39%), Gaps = 25/181 (13%)
Query: 480 NNFSPANKIREGGFNIVY--------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLI 531
+ + +I G F +V+ VA+K + + F E + + H L+
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 532 KIITICSSIDFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQP 585
++ +C F+ + +G L + + + + +DV + YL C
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-- 121
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DL N L+ ++ V V D G+ +F+ + +SS G V + +P +
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-------DQYTSSTGTKFPVKWASPEV 173
Query: 646 I 646
Sbjct: 174 F 174
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.8 bits (235), Expect = 5e-22
Identities = 37/192 (19%), Positives = 72/192 (37%), Gaps = 28/192 (14%)
Query: 474 ELSKATNNFSPAN-KIREGGFNIVY-----------NVAMKVANLK-QKEASRSFAAEFN 520
+L +N A+ ++ G F V +VA+KV +K + E
Sbjct: 2 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ 61
Query: 521 ALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAF 574
+ + + ++++I +C + + G L + + ++ + V+
Sbjct: 62 IMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM 120
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGI 634
++YL + VH DL N+LL + D GL+K L + TA +A
Sbjct: 121 GMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA-----G 172
Query: 635 NGTVGYVAPVII 646
+ + AP I
Sbjct: 173 KWPLKWYAPECI 184
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 95.5 bits (237), Expect = 5e-22
Identities = 41/199 (20%), Positives = 69/199 (34%), Gaps = 32/199 (16%)
Query: 482 FSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNIRHRN 529
FS +I G F VY VA+K + + E + E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 530 LIKIITICSSIDFEGFDFKAISNGQLRLC-----NLSLTQRVNIAIDVAFAIEYLRHHCQ 584
I+ + L L + + + YL H
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH-- 134
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPV 644
+++H D+K NILL + + +GD G A + + + GT ++AP
Sbjct: 135 -NMIHRDVKAGNILLSEPGLVKLGDFGSASIM------------APANSFVGTPYWMAPE 181
Query: 645 IIAARNLENREKRHTVMSF 663
+I A + + + V S
Sbjct: 182 VILAMDEGQYDGKVDVWSL 200
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.0 bits (233), Expect = 5e-22
Identities = 37/178 (20%), Positives = 71/178 (39%), Gaps = 25/178 (14%)
Query: 480 NNFSPANKIREGGFNIVY--------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLI 531
+ + ++ G F +V +VA+K+ + + F E + N+ H L+
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLV 62
Query: 532 KIITICSSIDFEGFDFKAISNGQLRLC------NLSLTQRVNIAIDVAFAIEYLRHHCQP 585
++ +C+ + ++NG L Q + + DV A+EYL
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 120
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
+H DL N L++ V V D GL++++ + +SS+G V + P
Sbjct: 121 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-------DEYTSSVGSKFPVRWSPP 170
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.0 bits (233), Expect = 6e-22
Identities = 30/181 (16%), Positives = 69/181 (38%), Gaps = 25/181 (13%)
Query: 480 NNFSPANKIREGGFNIVY--------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLI 531
++ G F V+ VA+K + + +F AE N ++ ++H+ L+
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 532 KIITICSS------IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQP 585
++ + + ++ L++ + +++A +A + ++
Sbjct: 72 RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-- 129
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
+H DL+ +NIL+ + + D GLA+ + E G + + AP
Sbjct: 130 -YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-------EGAKFPIKWTAPEA 181
Query: 646 I 646
I
Sbjct: 182 I 182
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.3 bits (234), Expect = 7e-22
Identities = 36/184 (19%), Positives = 68/184 (36%), Gaps = 26/184 (14%)
Query: 486 NKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITI 536
++ +G F VY A KV + K +E + E + L + H N++K++
Sbjct: 18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 77
Query: 537 CSSIDFEGFDFKAISNGQLRLCN------LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHG 590
+ + + G + L+ +Q + A+ YL + I+H
Sbjct: 78 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 134
Query: 591 DLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN 650
DLK NIL D + D G++ + GT ++AP ++
Sbjct: 135 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--------FIGTPYWMAPEVVMCET 186
Query: 651 LENR 654
++R
Sbjct: 187 SKDR 190
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.3 bits (229), Expect = 2e-21
Identities = 34/187 (18%), Positives = 63/187 (33%), Gaps = 30/187 (16%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNIRH 527
+F + +G F VY +A+KV A L++ E ++RH
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65
Query: 528 RNLIKIITICSSIDFEGFDFKAISNGQLRLC-----NLSLTQRVNIAIDVAFAIEYLRHH 582
N++++ + G + + ++A A+ Y
Sbjct: 66 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 125
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
++H D+KP N+LL + D G + S + GT+ Y+
Sbjct: 126 ---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----------SRRTTLCGTLDYLP 172
Query: 643 PVIIAAR 649
P +I R
Sbjct: 173 PEMIEGR 179
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 92.9 bits (230), Expect = 2e-21
Identities = 36/183 (19%), Positives = 77/183 (42%), Gaps = 27/183 (14%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNL 530
+ + +K+ G + VY VA+K + F E ++ I+H NL
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNL 75
Query: 531 IKIITICSSIDFEGFDFKAISNGQL-------RLCNLSLTQRVNIAIDVAFAIEYLRHHC 583
++++ +C+ + ++ G L +S + +A ++ A+EYL
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---E 132
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
+ + +H DL N L+ ++ + V D GL++ + G +T ++ G + + AP
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTYTAHAGAKFPIKWTAP 185
Query: 644 VII 646
+
Sbjct: 186 ESL 188
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.0 bits (230), Expect = 2e-21
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 25/180 (13%)
Query: 487 KIREGGFNIVY-------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS 539
I +G F V+ VA+K+ + ++E S AE +RH N++ I +
Sbjct: 10 SIGKGRFGEVWRGKWRGEEVAVKIFS-SREERSWFREAEIYQTVMLRHENILGFIAADNK 68
Query: 540 IDFEGFDFKAI----SNGQL----RLCNLSLTQRVNIAIDVAFAIEYLRHHC-----QPS 586
+ + +G L +++ + +A+ A + +L +P+
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 128
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
I H DLK NIL+ ++ + DLGLA T + GT Y+AP ++
Sbjct: 129 IAHRDLKSKNILVKKNGTCCIADLGLAVRH----DSATDTIDIAPNHRVGTKRYMAPEVL 184
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.1 bits (228), Expect = 3e-21
Identities = 35/178 (19%), Positives = 65/178 (36%), Gaps = 25/178 (14%)
Query: 486 NKIREGGFNIVY-----------NVAMKV--ANLKQKEASRSFAAEFNALRNIRHRNLIK 532
++ G F V VA+K+ AE N ++ + + +++
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 533 IITICSS----IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIV 588
+I IC + + E + ++ + ++ + + V+ ++YL V
Sbjct: 73 MIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 129
Query: 589 HGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
H DL N+LL + D GL+K L E A+T V + AP I
Sbjct: 130 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT-----HGKWPVKWYAPECI 182
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.1 bits (225), Expect = 7e-21
Identities = 42/187 (22%), Positives = 69/187 (36%), Gaps = 28/187 (14%)
Query: 480 NNFSPANKIREGGFNIVY-------------NVAMKVANLKQKEASR-SFAAEFNALRNI 525
+ + I G F VY VA+K E R F E +
Sbjct: 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66
Query: 526 RHRNLIKIITICSSIDFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYL 579
H N+I++ + S + + NG L + S+ Q V + +A ++Y
Sbjct: 67 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKY- 125
Query: 580 RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
+ VH DL NIL++ ++V V D GL++ L E ++ G +
Sbjct: 126 --LANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE-----DDPEATYTTSGGKIPIR 178
Query: 640 YVAPVII 646
+ AP I
Sbjct: 179 WTAPEAI 185
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.0 bits (225), Expect = 2e-20
Identities = 34/184 (18%), Positives = 63/184 (34%), Gaps = 28/184 (15%)
Query: 482 FSPANKIREGGFNIVY---------NVAMKVA-----NLKQKEASRSFAAEFNALRNIRH 527
F + G F VY V + VA +A++ E + ++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 528 RNLIKIITICSSIDFEGFDFKAISNGQLRLC-----NLSLTQRVNIAIDVAFAIEYLRHH 582
++ +++ IC + + L N+ +N + +A + YL
Sbjct: 71 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 130
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
+VH DL N+L+ + D GLAK L E + G + ++A
Sbjct: 131 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG------AEEKEYHAEGGKVPIKWMA 181
Query: 643 PVII 646
I
Sbjct: 182 LESI 185
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.3 bits (221), Expect = 3e-20
Identities = 35/186 (18%), Positives = 62/186 (33%), Gaps = 32/186 (17%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKVANLKQ-KEASRSFAAEFNALRNIRHRN 529
++ + EG + V VA+K+ ++K+ + + E + + H N
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 530 LIKIITICSSIDF---------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR 580
++K + G F I + + + YL
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLH 120
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
I H D+KP N+LLD+ + D GLA + GT+ Y
Sbjct: 121 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPY 171
Query: 641 VAPVII 646
VAP ++
Sbjct: 172 VAPELL 177
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.9 bits (220), Expect = 3e-20
Identities = 36/182 (19%), Positives = 64/182 (35%), Gaps = 32/182 (17%)
Query: 486 NKIREGGFNIVY---------NVAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKII 534
+I G F VY VA ++ K + F E L+ ++H N+++
Sbjct: 15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 74
Query: 535 TICSSIDFEGFD----FKAISNGQLRLC-----NLSLTQRVNIAIDVAFAIEYLRHHCQP 585
S + +++G L+ + + + + +++L H P
Sbjct: 75 DSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFL-HTRTP 133
Query: 586 SIVHGDLKPSNILL-DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPV 644
I+H DLK NI + +GDLGLA GT ++AP
Sbjct: 134 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI----------GTPEFMAPE 183
Query: 645 II 646
+
Sbjct: 184 MY 185
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.9 bits (220), Expect = 3e-20
Identities = 37/195 (18%), Positives = 67/195 (34%), Gaps = 33/195 (16%)
Query: 476 SKATNNFSPANKIREGGFNIVY---------NVAMKVANLK--QKEASRSFAAEFNALRN 524
S+A ++ I G + + K + + + +E N LR
Sbjct: 1 SRA-EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 59
Query: 525 IRHRNLIKIITICSS-------IDFE----GFDFKAISNGQLRLCNLSLTQRVNIAIDVA 573
++H N+++ I E G I+ G L + + +
Sbjct: 60 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 119
Query: 574 FAIEYL--RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSS 631
A++ R +++H DLKP+N+ LD +GD GLA+ L
Sbjct: 120 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK------- 172
Query: 632 IGINGTVGYVAPVII 646
GT Y++P +
Sbjct: 173 -AFVGTPYYMSPEQM 186
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.9 bits (217), Expect = 9e-20
Identities = 41/188 (21%), Positives = 68/188 (36%), Gaps = 30/188 (15%)
Query: 480 NNFSPANKIREGGFNIVY------------NVAMKV---ANLKQKEASRSFAAEFNALRN 524
+ K+ +G F +V +VA+K L Q EA F E NA+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAISNGQLRLC------NLSLTQRVNIAIDVAFAIEY 578
+ HRNLI++ + + + + G L + L A+ VA + Y
Sbjct: 68 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
L +H DL N+LL + +GD GL + L + +
Sbjct: 127 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE-----HRKVPF 178
Query: 639 GYVAPVII 646
+ AP +
Sbjct: 179 AWCAPESL 186
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.4 bits (216), Expect = 2e-19
Identities = 34/178 (19%), Positives = 66/178 (37%), Gaps = 24/178 (13%)
Query: 479 TNNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRN 529
++ KI +G VY VA++ NL+Q+ E +R ++ N
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 530 LIKIITICSSIDFEGFDFKAISNGQLRLCN----LSLTQRVNIAIDVAFAIEYLRHHCQP 585
++ + D + ++ G L + Q + + A+E+L +
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--- 135
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H D+K NILL D + D G + + + + GT ++AP
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS--------TMVGTPYWMAP 185
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.2 bits (213), Expect = 4e-19
Identities = 39/187 (20%), Positives = 68/187 (36%), Gaps = 26/187 (13%)
Query: 477 KATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRN 524
K +F + EG F+ V A+K+ ++ ++ E + +
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAISNGQLRLC-----NLSLTQRVNIAIDVAFAIEYL 579
+ H +K+ + F NG+L + T ++ L
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV---SAL 121
Query: 580 RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
+ I+H DLKP NILL++D+ + D G AK L A + GT
Sbjct: 122 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS------FVGTAQ 175
Query: 640 YVAPVII 646
YV+P ++
Sbjct: 176 YVSPELL 182
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.1 bits (210), Expect = 7e-19
Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 31/182 (17%)
Query: 480 NNFSPANKIREGGFNIVY-------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIK 532
I +G F V VA+K +K +++F AE + + +RH NL++
Sbjct: 7 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQ 64
Query: 533 IITICSSIDFEGFD-FKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQ 584
++ + + + ++ G L L + ++DV A+EYL +
Sbjct: 65 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN- 123
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPV 644
VH DL N+L+ +D V V D GL K S+ V + AP
Sbjct: 124 --FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-----------STQDTGKLPVKWTAPE 170
Query: 645 II 646
+
Sbjct: 171 AL 172
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 85.5 bits (211), Expect = 2e-18
Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 29/200 (14%)
Query: 464 KQQFPMISHAELSKATNNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRS 514
KQ +P + +++ ++ G F +V+ N A K + +
Sbjct: 10 KQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET 69
Query: 515 FAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCN----LSLTQRVNI 568
E + +RH L+ + + ++ +S G+L ++ + +S + V
Sbjct: 70 VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY 129
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAE 626
V + ++ + VH DLKP NI+ + D GL L +
Sbjct: 130 MRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---------D 177
Query: 627 TASSSIGINGTVGYVAPVII 646
S GT + AP +
Sbjct: 178 PKQSVKVTTGTAEFAAPEVA 197
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.4 bits (208), Expect = 2e-18
Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 29/183 (15%)
Query: 481 NFSPANKIREGGFNIVY------------NVAMKVAN-LKQKEASRSFAAEFNALRNIRH 527
+F+ I G F VY + A+K N + F E +++ H
Sbjct: 30 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 528 RNLIKIITICSSIDFEGF-DFKAISNGQLRL------CNLSLTQRVNIAIDVAFAIEYLR 580
N++ ++ IC + + +G LR N ++ + + VA ++
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG---MK 144
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
VH DL N +LD+ V D GLA+ +Y ++ + G V +
Sbjct: 145 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY----DKEFDSVHNKTGAKLPVKW 200
Query: 641 VAP 643
+A
Sbjct: 201 MAL 203
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.4 bits (208), Expect = 3e-18
Identities = 37/184 (20%), Positives = 66/184 (35%), Gaps = 28/184 (15%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNIRH 527
N+F + +G F V AMK+ + K+ E L+N RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 528 RNLIKIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHH 582
L + + D F + + G+L R + + ++ L +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV---SALEYL 121
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
+V+ D+K N++LD+D + D GL K ++ GT Y+A
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--------SDGATMKTFCGTPEYLA 173
Query: 643 PVII 646
P ++
Sbjct: 174 PEVL 177
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.1 bits (207), Expect = 3e-18
Identities = 38/226 (16%), Positives = 71/226 (31%), Gaps = 55/226 (24%)
Query: 465 QQFPMISHAELSKATNNFSPANKIREGGFNIVY--------------NVAMKVANLKQKE 510
+++ E + N + G F V VA+K+ K
Sbjct: 24 REYEYDLKWEFPR--ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS 81
Query: 511 ASR-SFAAEFNALRNI-RHRNLIKIITICS----------------------------SI 540
+ R + +E + + H N++ ++ C+ S
Sbjct: 82 SEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSE 141
Query: 541 DFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD 600
D ++ + + L L+ + A VA +E+L S VH DL N+L+
Sbjct: 142 DEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVT 198
Query: 601 QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
V + D GLA+ + V ++AP +
Sbjct: 199 HGKVVKICDFGLARDIMSDSNYVVRGN------ARLPVKWMAPESL 238
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.1 bits (207), Expect = 3e-18
Identities = 45/211 (21%), Positives = 73/211 (34%), Gaps = 53/211 (25%)
Query: 467 FPMISHAELSKATNNFSPANKIREGGFNIVY-----------NVAMKVAN-LKQKEASRS 514
+P++ N+ + I EG F V + A+K K+ R
Sbjct: 4 YPVLDW-------NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD 56
Query: 515 FAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAISNGQLR----------------- 556
FA E L + H N+I ++ C + + +G L
Sbjct: 57 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 116
Query: 557 ----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612
LS Q ++ A DVA ++YL Q +H DL NIL+ ++ V + D GL
Sbjct: 117 ANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGL 173
Query: 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++ Y T V ++A
Sbjct: 174 SRGQEVYVKKTMGR---------LPVRWMAI 195
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.0 bits (199), Expect = 3e-17
Identities = 37/206 (17%), Positives = 61/206 (29%), Gaps = 48/206 (23%)
Query: 480 NNFSPANKIREGGFNIVY--------------NVAMKVANLKQKEASR-SFAAEFNALRN 524
N S + G F V VA+K+ R + +E L
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 525 I-RHRNLIKIITICSSIDFEGFDFKAISNGQLR-----------------------LCNL 560
+ H N++ ++ C+ + G L L
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 561 SLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
L ++ + VA + +L +H DL NILL +T + D GLA+ +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 621 PGTTAETASSSIGINGTVGYVAPVII 646
V ++AP I
Sbjct: 200 NYVV------KGNARLPVKWMAPESI 219
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.4 bits (195), Expect = 6e-17
Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 30/179 (16%)
Query: 487 KIREGGFNIVY------------NVAMKVANLKQKEASRS-FAAEFNALRNIRHRNLIKI 533
I EG F V+ VA+K ++ R F E +R H +++K+
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 534 ITICSSIDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSI 587
I + + + + + G+LR +L L + A ++ A L +
Sbjct: 74 IGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA---LAYLESKRF 129
Query: 588 VHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
VH D+ N+L+ + +GD GL++++ T + + ++AP I
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------STYYKASKGKLPIKWMAPESI 181
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 79.9 bits (196), Expect = 7e-17
Identities = 41/218 (18%), Positives = 75/218 (34%), Gaps = 53/218 (24%)
Query: 473 AELSKATNNFSPANKIREGGFNIVY--------------NVAMKVANLK-QKEASRSFAA 517
L NN I EG F V+ VA+K+ + + F
Sbjct: 6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQR 65
Query: 518 EFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--------------------- 556
E + + N++K++ +C+ F+ ++ G L
Sbjct: 66 EAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLST 125
Query: 557 --------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
LS +++ IA VA + YL VH DL N L+ +++V +
Sbjct: 126 RARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIA 182
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
D GL++ +Y +A+ + + ++ P I
Sbjct: 183 DFGLSRNIY------SADYYKADGNDAIPIRWMPPESI 214
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 79.4 bits (195), Expect = 1e-16
Identities = 38/189 (20%), Positives = 65/189 (34%), Gaps = 31/189 (16%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNIRH 527
+F + G F V+ AMKV + + + E L + H
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63
Query: 528 RNLIKIITICSSIDFEGFDFKAISNGQLRL-----CNLSLTQRVNIAIDVAFAIEYLRHH 582
+I++ I G+L A +V L +
Sbjct: 64 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC---LALEYL 120
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
I++ DLKP NILLD++ + D G AK++ + T + GT Y+A
Sbjct: 121 HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV--PDVTYT---------LCGTPDYIA 169
Query: 643 PVIIAARNL 651
P +++ +
Sbjct: 170 PEVVSTKPY 178
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.5 bits (195), Expect = 2e-16
Identities = 40/186 (21%), Positives = 65/186 (34%), Gaps = 26/186 (13%)
Query: 479 TNNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASR-SFAAEFNALRNIRHR 528
++ + I EG + +V VA+K + + + E L RH
Sbjct: 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66
Query: 529 NLIKIITICSSIDFEGFDFKAISNG--------QLRLCNLSLTQRVNIAIDVAFAIEYLR 580
N+I I I + E + L+ +LS + ++Y+
Sbjct: 67 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 126
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
++H DLKPSN+LL+ + D GLA+ T T T Y
Sbjct: 127 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWY 178
Query: 641 VAPVII 646
AP I+
Sbjct: 179 RAPEIM 184
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 79.1 bits (194), Expect = 2e-16
Identities = 39/194 (20%), Positives = 65/194 (33%), Gaps = 29/194 (14%)
Query: 452 KPAHKDSNMLSMKQQFPMISHAELSKAT---------NNFSPANKIREGGFNIVY----- 497
A K S S+K+ L K + F + G F V
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 498 ----NVAMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550
+ AMK+ + + + E L+ + L+K+ + +
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 551 SNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605
+ G++ R+ S A + EYL +++ DLKP N+L+DQ
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYI 180
Query: 606 HVGDLGLAKFLYGY 619
V D G AK + G
Sbjct: 181 QVTDFGFAKRVKGR 194
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.2 bits (192), Expect = 3e-16
Identities = 36/185 (19%), Positives = 64/185 (34%), Gaps = 29/185 (15%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKV----ANLKQKEASRSFAAEFNALRNIR 526
+F + +G F V+ A+K L + + +
Sbjct: 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRH 581
H L + + + F + ++ G L L++ A ++ +++L
Sbjct: 62 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 121
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYV 641
IV+ DLK NILLD+D + D G+ K + T GT Y+
Sbjct: 122 KG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN--------TFCGTPDYI 170
Query: 642 APVII 646
AP I+
Sbjct: 171 APEIL 175
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.6 bits (190), Expect = 3e-16
Identities = 35/198 (17%), Positives = 70/198 (35%), Gaps = 38/198 (19%)
Query: 475 LSKATNNFSPANKIREGGFNIVY----------NVAMKVANLK-----QKEASRSFAAEF 519
L +A + +I EG + V+ VA+K ++ ++ A
Sbjct: 2 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 61
Query: 520 NALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVN-----------I 568
L H N++++ +C+ + + + + +V +
Sbjct: 62 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 121
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
+ +++L H +VH DLKP NIL+ + D GLA+ T+
Sbjct: 122 MFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS---- 174
Query: 629 SSSIGINGTVGYVAPVII 646
+ T+ Y AP ++
Sbjct: 175 -----VVVTLWYRAPEVL 187
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 76.7 bits (188), Expect = 5e-16
Identities = 33/197 (16%), Positives = 70/197 (35%), Gaps = 29/197 (14%)
Query: 476 SKATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALR 523
S ++ + + GG + V+ +VA+KV + F E
Sbjct: 3 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAA 62
Query: 524 NIRHRNLIKIITICSSIDFEGFD----FKAISNGQLRLC-----NLSLTQRVNIAIDVAF 574
+ H ++ + + G + + LR ++ + + + D
Sbjct: 63 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 122
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGI 634
A+ + + I+H D+KP+NI++ V D G+A+ + T A +
Sbjct: 123 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA-----V 174
Query: 635 NGTVGYVAPVIIAARNL 651
GT Y++P ++
Sbjct: 175 IGTAQYLSPEQARGDSV 191
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.2 bits (189), Expect = 6e-16
Identities = 33/194 (17%), Positives = 72/194 (37%), Gaps = 39/194 (20%)
Query: 480 NNFSPANKIREGGFNIVY--------------NVAMKVANLKQKEASR-SFAAEFNALRN 524
+ + ++ +G F +VY VA+K N R F E + ++
Sbjct: 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAISNGQL---------------RLCNLSLTQRVNIA 569
++++++ + S + ++ G L L SL++ + +A
Sbjct: 80 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 139
Query: 570 IDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETAS 629
++A + YL + VH DL N ++ +D +GD G+ + +Y +
Sbjct: 140 GEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 196
Query: 630 SSIGINGTVGYVAP 643
V +++P
Sbjct: 197 ------LPVRWMSP 204
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 76.6 bits (188), Expect = 1e-15
Identities = 34/177 (19%), Positives = 59/177 (33%), Gaps = 29/177 (16%)
Query: 487 KIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
++ G F +V+ K N + E + + + H LI +
Sbjct: 36 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 95
Query: 538 SSIDFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGD 591
+ +S G+L +S + +N ++++ H SIVH D
Sbjct: 96 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLD 152
Query: 592 LKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
+KP NI+ + + V D GLA L T + AP I+
Sbjct: 153 IKPENIMCETKKASSVKIIDFGLATKL---------NPDEIVKVTTATAEFAAPEIV 200
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 76.3 bits (187), Expect = 2e-15
Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 23/168 (13%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKVANLK------QKEASRSFAAEFNALRN 524
N+FS I GGF VY AMK + K + + + + +
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAISNGQLRLC-----NLSLTQRVNIAIDVAFAIEYL 579
++ + + D F ++ G L S A ++ +E++
Sbjct: 64 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 123
Query: 580 RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
+ +V+ DLKP+NILLD+ + DLGLA +P + T
Sbjct: 124 HNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 168
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 74.8 bits (183), Expect = 3e-15
Identities = 28/184 (15%), Positives = 59/184 (32%), Gaps = 20/184 (10%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNL 530
++ +I EG F +++ VA+K ++ + E+ + +
Sbjct: 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF--EPRRSDAPQLRDEYRTYKLLAGCTG 62
Query: 531 IKIITICSSIDFEGF---DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSI 587
I + D S L +A+ + ++ + S+
Sbjct: 63 IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL 122
Query: 588 VHGDLKPSNILLDQDVVTHVG-----DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
V+ D+KP N L+ + + D G+ KF Y ++GT Y++
Sbjct: 123 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF-YRDPVTKQHIPYREKKNLSGTARYMS 181
Query: 643 PVII 646
Sbjct: 182 INTH 185
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.5 bits (182), Expect = 4e-15
Identities = 30/150 (20%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Query: 481 NFSPANKIREGGFNIVY---------NVAMKV--ANLKQKEASRSFAAEFNALRNIRHRN 529
NF KI EG + +VY VA+K + + + + E + L+ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 530 LIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFA---IEYLRHHCQPS 586
++K++ + + + F+ + + + S + + + ++ ++ L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
++H DLKP N+L++ + + D GLA+
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF 152
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 73.7 bits (180), Expect = 7e-15
Identities = 35/185 (18%), Positives = 58/185 (31%), Gaps = 24/185 (12%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNL 530
N + KI G F +Y VA+K+ K E + ++
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL--ECVKTKHPQLHIESKIYKMMQGGVG 64
Query: 531 IKIITICSSIDFEGFDFKAISNGQLRLCN------LSLTQRVNIAIDVAFAIEYLRHHCQ 584
I I C + + L SL + +A + IEY+
Sbjct: 65 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI---HS 121
Query: 585 PSIVHGDLKPSNIL---LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYV 641
+ +H D+KP N L + + ++ D GLAK + + GT Y
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENK-NLTGTARYA 180
Query: 642 APVII 646
+
Sbjct: 181 SINTH 185
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.4 bits (182), Expect = 7e-15
Identities = 34/168 (20%), Positives = 60/168 (35%), Gaps = 31/168 (18%)
Query: 481 NFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLI 531
+++ I G F +VY VA+K ++ +R E +R + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 76
Query: 532 KIITICSSID--------------FEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIE 577
++ S ++ + L + + ++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 578 YLRHHCQPSIVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEPGTT 624
Y+ I H D+KP N+LLD D V + D G AK L EP +
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.8 bits (180), Expect = 8e-15
Identities = 37/188 (19%), Positives = 71/188 (37%), Gaps = 25/188 (13%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKVANLK--QKEASRSFAAEFNALRNIRHR 528
+ + KI +G F V+ VA+K ++ ++ + E L+ ++H
Sbjct: 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69
Query: 529 NLIKIITICSSIDFEG----------FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEY 578
N++ +I IC + FDF L L I + +
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 129
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
L + + I+H D+K +N+L+ +D V + D GLA+ + + T+
Sbjct: 130 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTN----RVVTL 185
Query: 639 GYVAPVII 646
Y P ++
Sbjct: 186 WYRPPELL 193
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.7 bits (177), Expect = 1e-14
Identities = 30/154 (19%), Positives = 61/154 (39%), Gaps = 19/154 (12%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKVANLKQ--KEASRSFAAEFNALRNIRHR 528
+ KI EG + V+ VA+K L + S E L+ ++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 529 NLIKIITICSS-----IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHC 583
N++++ + S + FE D +L + + ++ L
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL---LKGLGFCH 118
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+++H DLKP N+L++++ + + GLA+
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFG 152
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.2 bits (179), Expect = 2e-14
Identities = 33/159 (20%), Positives = 59/159 (37%), Gaps = 21/159 (13%)
Query: 487 KIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
+ G F IV+ K +K + E + L RHRN++ +
Sbjct: 12 DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL-VKKEISILNIARHRNILHLHESF 70
Query: 538 SSIDFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGD 591
S++ F+ IS + L+ + V+ V A+++L H I H D
Sbjct: 71 ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFD 127
Query: 592 LKPSNILLDQDVVTHV--GDLGLAKFLYGYEPGTTAETA 628
++P NI+ + + + G A+ L + TA
Sbjct: 128 IRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA 166
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 72.4 bits (177), Expect = 2e-14
Identities = 47/200 (23%), Positives = 73/200 (36%), Gaps = 36/200 (18%)
Query: 481 NFSPANKIREGGFNIVY---------NVAMKVANLKQ---------KEASRSFAAEFNAL 522
N+ P + G ++V A+K+ ++ +E + E + L
Sbjct: 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63
Query: 523 RNIR-HRNLIKIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAI 576
R + H N+I++ + F F + G+L LS + I + I
Sbjct: 64 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 123
Query: 577 EYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGING 636
L IVH DLKP NILLD D+ + D G + L E + G
Sbjct: 124 CALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE---------VCG 171
Query: 637 TVGYVAPVIIAARNLENREK 656
T Y+AP II +N
Sbjct: 172 TPSYLAPEIIECSMNDNHPG 191
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 71.2 bits (174), Expect = 6e-14
Identities = 49/189 (25%), Positives = 75/189 (39%), Gaps = 30/189 (15%)
Query: 479 TNNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASR-SFAAEFNALRNIRHR 528
+ + + + G F+ V VA+K K E S E L I+H
Sbjct: 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 67
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHC 583
N++ + I S + +S G+L + + V A++YL
Sbjct: 68 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 127
Query: 584 QPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
IVH DLKP N+L D+D + D GL+K +PG+ T GT GY
Sbjct: 128 ---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKME---DPGSVLST------ACGTPGY 175
Query: 641 VAPVIIAAR 649
VAP ++A +
Sbjct: 176 VAPEVLAQK 184
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 70.7 bits (172), Expect = 6e-14
Identities = 29/152 (19%), Positives = 62/152 (40%), Gaps = 18/152 (11%)
Query: 480 NNFSPANKIREGGFNIVY--------NVAMKVANLKQ--KEASRSFAAEFNALRNIRHRN 529
+ KI EG + +VY A+K L++ + + E + L+ ++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 530 LIKIITICSS-----IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQ 584
++K+ + + + FE D + L + + + + +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLL---NGIAYCHD 118
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
++H DLKP N+L++++ + D GLA+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAF 150
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.5 bits (169), Expect = 2e-13
Identities = 41/180 (22%), Positives = 67/180 (37%), Gaps = 30/180 (16%)
Query: 486 NKIREGGFNIVY---------NVAMKVANLKQKEAS-----RSFAAEFNALRNIRHRNLI 531
+ + EG F VY VA+K L + + R+ E L+ + H N+I
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 532 KIITICSSIDFEGFDFKAISNGQLRLCN-----LSLTQRVNIAIDVAFAIEYLRHHCQPS 586
++ F + + L+ + + +EYL H
Sbjct: 64 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW--- 120
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
I+H DLKP+N+LLD++ V + D GLAK + T Y AP ++
Sbjct: 121 ILHRDLKPNNLLLDENGVLKLADFGLAKSFG--------SPNRAYTHQVVTRWYRAPELL 172
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.5 bits (164), Expect = 8e-13
Identities = 36/184 (19%), Positives = 67/184 (36%), Gaps = 36/184 (19%)
Query: 487 KIREGGFNIVY---------NVAMKVANLKQKEASRS------FAAEFNALRNIRHRNLI 531
++ G F +V A K ++ ++SR E + L+ I+H N+I
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 532 KIITICSS-----IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + E + + +L+ + + + + +
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI---LNGVYYLHSLQ 133
Query: 587 IVHGDLKPSNILLDQDVVT----HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
I H DLKP NI+L V + D GLA + + + I GT +VA
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---------DFGNEFKNIFGTPEFVA 184
Query: 643 PVII 646
P I+
Sbjct: 185 PEIV 188
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 67.6 bits (164), Expect = 9e-13
Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 30/204 (14%)
Query: 455 HKDSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIVY---------NVAMKVAN 505
+ D N ++ + SH +++ K+ G ++ V+ V +K+
Sbjct: 10 YTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK 69
Query: 506 LKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFE--GFDFKAISNGQLR--LCNL 560
+K+ E L N+R N+I + I F+ ++N + L
Sbjct: 70 PVKKK---KIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL 126
Query: 561 SLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGDLGLAKFLYGY 619
+ ++ A++Y I+H D+KP N+++D + + D GLA+F +
Sbjct: 127 TDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 183
Query: 620 EPGTTAETASSSIGINGTVGYVAP 643
+ + + P
Sbjct: 184 QEYNV---------RVASRYFKGP 198
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.2 bits (163), Expect = 1e-12
Identities = 39/226 (17%), Positives = 69/226 (30%), Gaps = 54/226 (23%)
Query: 480 NNFSPANKIREGGFNIVY--------------NVAMKVANLKQKEAS-RSFAAEFNALRN 524
+ + G F V VA+K+ + R+ +E L +
Sbjct: 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72
Query: 525 IRHRNLIKIITICSSIDFE-----------------------GFDFKAISNGQLRLCNLS 561
I H + + + F ++ L L+
Sbjct: 73 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132
Query: 562 LTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621
L + + VA +E+L +H DL NILL + V + D GLA+ +Y
Sbjct: 133 LEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 189
Query: 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRF 667
A + ++AP I ++ +T+ S F
Sbjct: 190 YVRKGDAR------LPLKWMAPETI-------FDRVYTIQSDVWSF 222
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.2 bits (163), Expect = 1e-12
Identities = 34/160 (21%), Positives = 58/160 (36%), Gaps = 19/160 (11%)
Query: 480 NNFSPANKIREGGFNIVY------------NVAMKVAN----LKQKEASRSFAAEFNALR 523
NF + G + V+ AMKV +++ + + E L
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 524 NIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVN---IAIDVAFAIEYLR 580
+IR + + + + NG +LS +R + I V + L
Sbjct: 84 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 143
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
H + I++ D+K NILLD + + D GL+K E
Sbjct: 144 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE 183
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.9 bits (160), Expect = 2e-12
Identities = 32/193 (16%), Positives = 55/193 (28%), Gaps = 37/193 (19%)
Query: 487 KIREGGFNIVY---------NVAMKV------ANLKQKEASRSFAAEFNALRNIR--HRN 529
+ GGF VY VA+K ++ + E L+ +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 530 LIKIITICSSIDFEGFDFKAISNGQLRLC------NLSLTQRVNIAIDVAFAIEYLRHHC 583
+I+++ D + Q L + V A+ + +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 584 QPSIVHGDLKPSNILLDQDV-VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
++H D+K NIL+D + + D G L +GT Y
Sbjct: 131 ---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----------FDGTRVYSP 177
Query: 643 PVIIAARNLENRE 655
P I R
Sbjct: 178 PEWIRYHRYHGRS 190
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.3 bits (158), Expect = 5e-12
Identities = 45/220 (20%), Positives = 76/220 (34%), Gaps = 50/220 (22%)
Query: 466 QFPMISHAELSKATNNFSPANKIREGGFNIVY----------------NVAMKVANLKQK 509
+ P EL + + + EG F V VA+K+
Sbjct: 1 ELPEDPRWELPR--DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 58
Query: 510 EASRS-FAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAISNGQLR----------- 556
E S +E ++ I +H+N+I ++ C+ + S G LR
Sbjct: 59 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 118
Query: 557 ----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTH 606
LS V+ A VA +EYL +H DL N+L+ +D V
Sbjct: 119 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 175
Query: 607 VGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
+ D GLA+ ++ + + V ++AP +
Sbjct: 176 IADFGLARDIH------HIDYYKKTTNGRLPVKWMAPEAL 209
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.2 bits (158), Expect = 8e-12
Identities = 29/167 (17%), Positives = 61/167 (36%), Gaps = 27/167 (16%)
Query: 474 ELSKAT----NNFSPANKIREGGFNIVY---------NVAMKV--ANLKQKEASRSFAAE 518
E++K + + G + V VA+K + + ++ E
Sbjct: 8 EVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRE 67
Query: 519 FNALRNIRHRNLIKIITICSSID--------FEGFDFKAISNGQLRLCN-LSLTQRVNIA 569
L+++RH N+I ++ + + + + F G+L L + +
Sbjct: 68 LRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLV 127
Query: 570 IDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
+ + Y+ H DLKP N+ +++D + D GLA+
Sbjct: 128 YQMLKGLRYIHAAGII---HRDLKPGNLAVNEDCELKILDFGLARQA 171
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 62.1 bits (149), Expect = 5e-11
Identities = 56/291 (19%), Positives = 98/291 (33%), Gaps = 28/291 (9%)
Query: 126 SNASSLEMIEFSRNQFSGGVSV--DFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCS 183
+ + ++ S + + L L++L + G N + I
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYI------GGINNLVGPIPPAIAKL 100
Query: 184 KLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQ 243
+ + + T+ + N +S T+P I +L NL +T + ++
Sbjct: 101 TQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160
Query: 244 LIGTIPPLIGETPNLQL-LNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKS 302
+ G IP G L + I N L G I + NL L + +S+
Sbjct: 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSD 220
Query: 303 LLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPE 362
+ K + + ++ L+L NN + G+LP + LK L
Sbjct: 221 KNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFL---------- 270
Query: 363 NLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSC 413
LN+S+N E+P G + N LCG LP+C
Sbjct: 271 -----HSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS----PLPAC 312
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 48.6 bits (114), Expect = 1e-06
Identities = 42/264 (15%), Positives = 85/264 (32%), Gaps = 12/264 (4%)
Query: 20 LRYINLVNNGFNG--EIPHQIGRLISLERLILSNN-SFSCAIPANLSSGSNLIKLSTDSN 76
+ ++L IP + L L L + + IP ++ + L L
Sbjct: 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT 111
Query: 77 NLVRDILTEICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLSLSNASSLE 132
N+ I + + L L S+ L +L+ ++ N+ S
Sbjct: 112 NVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171
Query: 133 MIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNR 192
+ + + + LNL +L + ++ + +
Sbjct: 172 FSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN 231
Query: 193 NGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLI 252
+ + ++ + + + +NRI T+P G+ L L+ L + + L G IP
Sbjct: 232 SLAFDLGKVGLSKNLNGLD---LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG- 287
Query: 253 GETPNLQLLNIGGN-HLQGSILSS 275
G + N L GS L +
Sbjct: 288 GNLQRFDVSAYANNKCLCGSPLPA 311
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 45.9 bits (107), Expect = 1e-05
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Query: 14 CILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLST 73
L L ++L NN G +P + +L L L +S N+ IP + +
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAY 298
Query: 74 DSNNLVRDILTEICS 88
+N + C+
Sbjct: 299 ANNKCLCGSPLPACT 313
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 62.3 bits (150), Expect = 8e-11
Identities = 71/352 (20%), Positives = 138/352 (39%), Gaps = 31/352 (8%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
+ + G I + L +L ++ SNN + P L + + L+ + ++N +
Sbjct: 46 VTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA 101
Query: 80 RDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRN 139
+ L + ID L +L +L L L+ N +S S L ++
Sbjct: 102 DITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSF 161
Query: 140 QFSGGVSVDFSRLK--------------NLSWLNLGVNNLGSGTANELDFINLLTNCSKL 185
+ L L T N++ I L + L
Sbjct: 162 GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNL 221
Query: 186 ERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLI 245
+ L N N + ++A+L++ + + + +N+IS+ P + L L L + ++Q+
Sbjct: 222 DELSLNGNQLKD--IGTLASLTN-LTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS 276
Query: 246 GTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLG 305
I PL G T L S +S+L NLT T FNN+ P +++ L
Sbjct: 277 N-ISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQR 333
Query: 306 LSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI 357
L ++NK++ + ++T ++ +L +N ++ P + NL + +L +
Sbjct: 334 LFFANNKVSD--VSSLANLTNIN-WLSAGHNQISDLTP--LANLTRITQLGL 380
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 50.0 bits (118), Expect = 6e-07
Identities = 61/337 (18%), Positives = 102/337 (30%), Gaps = 65/337 (19%)
Query: 103 IDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGV 162
L + +L L + ++L I FS NQ + L L + +
Sbjct: 40 QTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTD--ITPLKNLTKLVDILMNN 97
Query: 163 NNLGS------------------------------GTANELDFINLLTNCSKLERLYFNR 192
N + N +++ S L L +
Sbjct: 98 NQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQ 157
Query: 193 NGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLI 252
G + L++ + + + + L NL L ++Q+ P I
Sbjct: 158 QLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGI 217
Query: 253 GETPNLQLLNIGGNHLQG-SILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHN 311
NL L++ GN L+ L+SL NLT N + P L+ L L + N
Sbjct: 218 --LTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 273
Query: 312 KLTSTLPQQILSVTTLSL-------------------YLELDNNLLNGSLPPEVGNLKNL 352
++++ P L+ T YL L N ++ P V +L L
Sbjct: 274 QISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKL 331
Query: 353 LRLHI-------PEYPENLSFFELLNLSYNYFGSEVP 382
RL NL+ L+ +N P
Sbjct: 332 QRLFFANNKVSDVSSLANLTNINWLSAGHNQISDLTP 368
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 47.7 bits (112), Expect = 4e-06
Identities = 38/163 (23%), Positives = 57/163 (34%), Gaps = 10/163 (6%)
Query: 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLS 63
N L+ L L T L ++L NN + P + L L L L N S P L+
Sbjct: 228 GNQLKDIGTLASL-TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LA 282
Query: 64 SGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL 123
+ L L + N L L + I + L L L A N+
Sbjct: 283 GLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVS 342
Query: 124 ---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVN 163
SL+N +++ + NQ S + L ++ L L
Sbjct: 343 DVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 46.5 bits (109), Expect = 7e-06
Identities = 63/383 (16%), Positives = 120/383 (31%), Gaps = 45/383 (11%)
Query: 66 SNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGG--RIDSLGHLKSLLLLSLAFNQF- 122
+ +K N+ + L ++ L+ D G ID + +L +L ++ + NQ
Sbjct: 22 AEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLT 79
Query: 123 --LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLS------WLNLGVNNLGSGTANELD 174
L N + L I + NQ + + ++ +
Sbjct: 80 DITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 139
Query: 175 FINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNL 234
N +++ S L L + G + L++ + + + + L NL
Sbjct: 140 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNL 199
Query: 235 NWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG-SILSSLGNLTLQTYLFNNLQGNI 293
L ++Q+ P I NL L++ GN L+ L+SL NLT N +
Sbjct: 200 ESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLA 257
Query: 294 PSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLL 353
P L+ L L + N++++ P L+ T E
Sbjct: 258 P--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQL------------------ 297
Query: 354 RLHIPEYPENLSFFELLNLSYNYFGSEVPTKGVFN------NKTRFSIIGNGKLCGGLDE 407
NL L L +N P + + S + + ++
Sbjct: 298 --EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSDVSSLANLTNINW 355
Query: 408 LHLPSCRYKGSIK-PSITSLKVL 429
L + ++T + L
Sbjct: 356 LSAGHNQISDLTPLANLTRITQL 378
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 61.6 bits (148), Expect = 1e-10
Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 40/191 (20%)
Query: 487 KIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
K+ G F+ V+ +VAMK+ K + + E L+ + + K ++
Sbjct: 20 KLGWGHFSTVWLAKDMVNNTHVAMKIVR-GDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 78
Query: 538 SSIDFEGFDFKAISNGQLRLCNL---------------------SLTQRVNIAIDVAFAI 576
++ + D + L I+ + +
Sbjct: 79 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 138
Query: 577 EYLRHHCQPSIVHGDLKPSNILLDQ-DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGIN 635
+Y+ C I+H D+KP N+L++ D ++ + +A G
Sbjct: 139 DYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADL------GNACWYDEHYTNSI 190
Query: 636 GTVGYVAPVII 646
T Y +P ++
Sbjct: 191 QTREYRSPEVL 201
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.5 bits (146), Expect = 2e-10
Identities = 33/180 (18%), Positives = 61/180 (33%), Gaps = 39/180 (21%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI 540
G V A+K+ +A R R + ++++I+ + ++
Sbjct: 22 LGINGKVLQIFNKRTQEKFALKMLQ-DCPKARREVELH---WRASQCPHIVRIVDVYENL 77
Query: 541 DFEG----FDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
+ + G+L + + I + AI+YL +I H
Sbjct: 78 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAH 134
Query: 590 GDLKPSNILLD---QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
D+KP N+L + + + D G AK + TT T YVAP ++
Sbjct: 135 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT---------PCYTPYYVAPEVL 185
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 57.5 bits (138), Expect = 5e-10
Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 24/151 (15%)
Query: 486 NKIREGGFNIVY--------NVAMKVANLKQKE----------ASRSFAAEFNALRNIRH 527
+ EG + V+ +K + F+
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65
Query: 528 RNLIKI--ITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQP 585
R L K+ + + +EG L + + + + + H
Sbjct: 66 RALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRG-- 123
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
IVHGDL N+L+ ++ + + D + +
Sbjct: 124 -IVHGDLSQYNVLVSEEGI-WIIDFPQSVEV 152
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.2 bits (142), Expect = 6e-10
Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 31/183 (16%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKV--ANLKQKEASRSFAAEFNALRNIRHR 528
+ I G IV NVA+K + + ++ E ++ + H+
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 529 NLIKIITICSSID--------FEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR 580
N+I ++ + + + + + Q+ L + + + I++L
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
+H DLKPSNI++ D + D GLA+ T T Y
Sbjct: 137 SAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---------YVVTRYY 184
Query: 641 VAP 643
AP
Sbjct: 185 RAP 187
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.9 bits (138), Expect = 9e-10
Identities = 56/269 (20%), Positives = 93/269 (34%), Gaps = 20/269 (7%)
Query: 33 EIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKL 92
+P I + +R+ L N S A+ + NL L SN L R L L
Sbjct: 25 AVPVGIPA--ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 93 ERLRIDCGGRIDSL-----GHLKSLLLLSLAFNQFLSLSNA-----SSLEMIEFSRNQFS 142
E+L + ++ S+ L L L L L ++L+ + N
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 143 GGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHS 202
F L NL+ L L N + S L+RL ++N V PH+
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISS------VPERAFRGLHSLDRLLLHQNRVAHVHPHA 196
Query: 203 IANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLN 262
+L + + +N +S+ + L L +L + + + LQ
Sbjct: 197 FRDLGRLMTLY-LFANNLSALPTEALAPLRALQYLRLNDNPWVCDC-RARPLWAWLQKFR 254
Query: 263 IGGNHLQGSILSSLGNLTLQTYLFNNLQG 291
+ + S+ L L+ N+LQG
Sbjct: 255 GSSSEVPCSLPQRLAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (117), Expect = 5e-07
Identities = 44/258 (17%), Positives = 86/258 (33%), Gaps = 17/258 (6%)
Query: 129 SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188
++ + I N+ S + F +NL+ L L N T + LE+L
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNV------LARIDAAAFTGLALLEQL 85
Query: 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI 248
+ N + + + + + + + P R L L +L ++ + L
Sbjct: 86 DLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALP 145
Query: 249 PPLIGETPNLQLLNIGGNHLQGSI---LSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLG 305
+ NL L + GN + L +L N + P + + L+
Sbjct: 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMT 205
Query: 306 LSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIP------E 359
L + N L++ + + + L YL L++N L +
Sbjct: 206 LYLFANNLSALPTEALAPLRALQ-YLRLNDNPWVCD-CRARPLWAWLQKFRGSSSEVPCS 263
Query: 360 YPENLSFFELLNLSYNYF 377
P+ L+ +L L+ N
Sbjct: 264 LPQRLAGRDLKRLAANDL 281
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.0 bits (115), Expect = 8e-07
Identities = 35/237 (14%), Positives = 69/237 (29%), Gaps = 13/237 (5%)
Query: 185 LERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQL 244
+R++ + N V S + + + +++QL
Sbjct: 34 SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93
Query: 245 IGTIPPLIGETPNLQLLNIGGNH---LQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCK 301
P L L++ L + L L N LQ + +
Sbjct: 94 RSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLG 153
Query: 302 SLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNL---------KNL 352
+L L + N+++S + + +L L L N + P +L N
Sbjct: 154 NLTHLFLHGNRISSVPERAFRGLHSLDRLL-LHQNRVAHVHPHAFRDLGRLMTLYLFANN 212
Query: 353 LRLHIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELH 409
L E L + L L+ N + + + ++ +F + C L
Sbjct: 213 LSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLA 269
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.7 bits (138), Expect = 1e-09
Identities = 48/299 (16%), Positives = 92/299 (30%), Gaps = 42/299 (14%)
Query: 16 LRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDS 75
L ++L NN L +L LIL NN S P + L +L
Sbjct: 29 LPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 88
Query: 76 NNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIE 135
N L +L +L + + + F L+ +E+
Sbjct: 89 NQLKELPEKMPKTLQELRVH---------------ENEITKVRKSVFNGLNQMIVVELGT 133
Query: 136 FSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGF 195
+ SG + F +K LS++ + N+ + L L+ + N
Sbjct: 134 N-PLKSSGIENGAFQGMKKLSYIRIADTNITTIPQG---------LPPSLTELHLDGNKI 183
Query: 196 EGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGET 255
V S+ L S S + +G ++ + +P + +
Sbjct: 184 TKVDAASLKGL--NNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADH 241
Query: 256 PNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT 314
+Q++ + N+ +S++G+ P S G+S+ N +
Sbjct: 242 KYIQVVYLHNNN-----ISAIGSNDFC----------PPGYNTKKASYSGVSLFSNPVQ 285
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 52.0 bits (123), Expect = 1e-07
Identities = 37/206 (17%), Positives = 68/206 (33%), Gaps = 7/206 (3%)
Query: 204 ANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNI 263
+L + + +N+I+ +NL NL+ L + ++++ P L+ L +
Sbjct: 27 KDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 86
Query: 264 GGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLA--NCKSLLGLSVSHNKLTSTLPQQI 321
N L+ L N + S N ++ L + K +
Sbjct: 87 SKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF 146
Query: 322 LSVTTLSLYLELDNNL--LNGSLPPEVGNL---KNLLRLHIPEYPENLSFFELLNLSYNY 376
+ LS D N+ + LPP + L N + + L+ L LS+N
Sbjct: 147 QGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 206
Query: 377 FGSEVPTKGVFNNKTRFSIIGNGKLC 402
+ R + N KL
Sbjct: 207 ISAVDNGSLANTPHLRELHLNNNKLV 232
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 37.3 bits (85), Expect = 0.004
Identities = 26/193 (13%), Positives = 61/193 (31%), Gaps = 19/193 (9%)
Query: 1 NSSNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPA 60
+ ++ S + + + + +G + L + +++ + + IP
Sbjct: 109 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQ 167
Query: 61 NLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFN 120
L +L +L D N + + + L L +L +
Sbjct: 168 GLPP--SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA---------------V 210
Query: 121 QFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLT 180
SL+N L + + N+ V + K + + L NN+ + +N+ T
Sbjct: 211 DNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNT 269
Query: 181 NCSKLERLYFNRN 193
+ + N
Sbjct: 270 KKASYSGVSLFSN 282
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.7 bits (133), Expect = 7e-09
Identities = 25/158 (15%), Positives = 56/158 (35%), Gaps = 23/158 (14%)
Query: 479 TNNFSPANKIREGGFNIVY---------NVAMKV--ANLKQKEASRSFAAEFNALRNIRH 527
+ + + G + V VA+K + ++ E L++++H
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 528 RNLIKIITICSSIDFEGFDFKAI---------SNGQLRLCNLSLTQRVNIAIDVAFAIEY 578
N+I ++ + + N ++ L+ + + ++Y
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
+ H DLKPSN+ +++D + D GLA+
Sbjct: 137 IHSADII---HRDLKPSNLAVNEDCELKILDFGLARHT 171
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 40.2 bits (92), Expect = 7e-04
Identities = 47/333 (14%), Positives = 97/333 (29%), Gaps = 23/333 (6%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
+ L N G + +P LE L+ S NS + +P +L L D+NN
Sbjct: 40 AHELELNNLGLS-SLPELPP---HLESLVASCNSLT-ELP---ELPQSLKSLLVDNNN-- 89
Query: 80 RDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRN 139
L + L L +++ L L++ L + SL L
Sbjct: 90 ---LKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIA 146
Query: 140 QFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVL 199
+ + + +N +L L
Sbjct: 147 AGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFL 206
Query: 200 PHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQ 259
A+ + + + + + + ++ + I + E P
Sbjct: 207 TTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNL 266
Query: 260 LLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQ 319
++ S+ +L + + NN +P+ + L S N L +P+
Sbjct: 267 YYLNASSNEIRSLCDLPPSLE-ELNVSNNKLIELPALPPRLER---LIASFNHLAE-VPE 321
Query: 320 QILSVTTLSLYLELDNNLLNGSLPPEVGNLKNL 352
++ L ++ N L P ++++L
Sbjct: 322 LPQNLKQLH----VEYNPLR-EFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 37.5 bits (85), Expect = 0.004
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 13/92 (14%)
Query: 286 FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPE 345
N I S SL L+VS+NKL LP + L N+L +P
Sbjct: 269 LNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPALPPRLERLIAS---FNHL--AEVPEL 322
Query: 346 VGNLKNL------LRLHIPEYPENLSFFELLN 371
NLK L LR P+ PE++ + +
Sbjct: 323 PQNLKQLHVEYNPLR-EFPDIPESVEDLRMNS 353
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 37.5 bits (85), Expect = 0.004
Identities = 21/103 (20%), Positives = 34/103 (33%), Gaps = 16/103 (15%)
Query: 133 MIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNR 192
+ N S + +L LN+ N L L +LERL +
Sbjct: 264 PNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE----------LPALPPRLERLIASF 313
Query: 193 NGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLN 235
N +P NL KQ+ + N + P ++ +L
Sbjct: 314 NHLAE-VPELPQNL----KQLHVEYNPLRE-FPDIPESVEDLR 350
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.7 bits (91), Expect = 8e-04
Identities = 32/213 (15%), Positives = 65/213 (30%), Gaps = 12/213 (5%)
Query: 124 SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCS 183
+S +S + + + ++ K+ + L+L N L + + L +
Sbjct: 5 EVSKVASHLEVNCDKRNLT---ALPPDLPKDTTILHLSENLLYTFSLATL------MPYT 55
Query: 184 KLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQ 243
+L +L +R + + T+ + V +S
Sbjct: 56 RLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSL 115
Query: 244 LIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSL 303
+G + L N L +L+ L + NNL L ++L
Sbjct: 116 PLGALRGLGELQELYLKGNEL-KTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENL 174
Query: 304 LGLSVSHNKLTSTLPQQILSVTTLSLYLELDNN 336
L + N L + +P+ L + L N
Sbjct: 175 DTLLLQENSLYT-IPKGFFGSHLLP-FAFLHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.5 bits (88), Expect = 0.002
Identities = 36/213 (16%), Positives = 64/213 (30%), Gaps = 14/213 (6%)
Query: 105 SLGHLKSLLLLSLAFNQFLSLSNA--SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGV 162
+ + S L ++ +L ++ S N L+ L
Sbjct: 5 EVSKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQL---- 60
Query: 163 NNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISS 222
NL +L L L+ + + + + + NR++S
Sbjct: 61 -NLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLP-----ALTVLDVSFNRLTS 114
Query: 223 TIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQ 282
+R L L L ++ ++L P L+ TP L+ L++ N+L L L
Sbjct: 115 LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENL 174
Query: 283 TYLF--NNLQGNIPSSLANCKSLLGLSVSHNKL 313
L N IP L + N
Sbjct: 175 DTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (89), Expect = 0.002
Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 5/86 (5%)
Query: 125 LSNASSLEMIEFSRNQFSGGVSVD----FSRLKNLSWLNLGVNNLGSGTANELDFINLLT 180
S L ++ + S +L L+L N LG +L ++
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQL-VESVRQ 423
Query: 181 NCSKLERLYFNRNGFEGVLPHSIANL 206
LE+L + + + L
Sbjct: 424 PGCLLEQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (86), Expect = 0.003
Identities = 10/83 (12%), Positives = 28/83 (33%), Gaps = 5/83 (6%)
Query: 20 LRYINLVNNGFNGE-IPHQIGRLISLERLILSNNSFS----CAIPANLSSGSNLIKLSTD 74
++ +++ + + L + + L + + I + L L +L+
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 75 SNNLVRDILTEICSLFKLERLRI 97
SN L + + + +I
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKI 86
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (87), Expect = 0.003
Identities = 42/310 (13%), Positives = 88/310 (28%), Gaps = 44/310 (14%)
Query: 46 RLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI-DCGGRID 104
L L+ + + L S + + + L E S F+++ + + + +
Sbjct: 4 TLDLTGKNLHPDVTGRLLSQGVIAFRC--PRSFMDQPLAEHFSPFRVQHMDLSNSVIEVS 61
Query: 105 SLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGV-- 162
+L + LS S L+ + + S + ++ NL LNL
Sbjct: 62 TLHGI---------------LSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCS 106
Query: 163 NNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISS 222
L + L + F + + H ++ + + S
Sbjct: 107 GFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSD 166
Query: 223 TIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQ 282
R ++ +S L + LQ L++
Sbjct: 167 LSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC---------------- 210
Query: 283 TYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSL 342
++ L +L L V TL ++ +L+++ +
Sbjct: 211 ----YDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALP----HLQINCSHFTTIA 262
Query: 343 PPEVGNLKNL 352
P +GN KN
Sbjct: 263 RPTIGNKKNQ 272
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 746 | |||
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.97 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.97 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.95 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.94 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.93 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.93 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.92 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.92 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.9 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.89 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.88 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.84 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.81 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.78 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.76 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.73 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.72 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.72 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.72 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.71 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.71 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.7 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.68 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.66 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.63 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.53 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.5 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.49 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.47 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.47 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.44 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.43 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.43 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.25 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.23 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.19 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.15 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.45 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.28 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.11 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.52 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.41 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.31 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.89 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.63 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 96.08 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 93.58 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 93.31 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 93.25 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-44 Score=365.15 Aligned_cols=232 Identities=20% Similarity=0.267 Sum_probs=175.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
..++|+..+.||+|+||+||+ ||||+++.. .....+.|.+|++++++++|||||++++++.+ +..++||||
T Consensus 6 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey 84 (276)
T d1uwha_ 6 PDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQW 84 (276)
T ss_dssp CTTCCCCCSEEEECSSCEEEEEESSSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred ccccEEEEEEEeeCCCcEEEEEEECCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEec
Confidence 357899999999999999998 999998644 24456789999999999999999999998765 568999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|++|+|. ...+++.++..++.|||+||+|||++ +||||||||+|||++.++.+||+|||+|+.......
T Consensus 85 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~-- 159 (276)
T d1uwha_ 85 CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-- 159 (276)
T ss_dssp CCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred CCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeeccccCC--
Confidence 9999985 35689999999999999999999999 999999999999999999999999999987643221
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeeccccc-----------cccchhhcc------ccCC
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKK-----------QNKSILKSA------GIKG 686 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~-----------~~~~i~~~~------~~~~ 686 (746)
........||+.|||||++.+.....++.++|||||||++|..... +........ ....
T Consensus 160 ----~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~ 235 (276)
T d1uwha_ 160 ----SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR 235 (276)
T ss_dssp ----------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSC
T ss_pred ----cccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhcc
Confidence 1223346899999999999876544456679999999999921110 111111111 1112
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
..+.+.+..++..|+...|. ||++.++...++.
T Consensus 236 ~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~ 269 (276)
T d1uwha_ 236 SNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 269 (276)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 34445666777777777777 8888877655544
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-43 Score=360.19 Aligned_cols=179 Identities=21% Similarity=0.305 Sum_probs=153.4
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||+||+ ||||++.... .+..+.+.+|++++++++|||||++++++.+.+..|+|||
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE 83 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 83 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence 35799999999999999997 9999986543 2344578999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
||++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+.....
T Consensus 84 y~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~-- 158 (271)
T d1nvra_ 84 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-- 158 (271)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTE--
T ss_pred ccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeeccCCc--
Confidence 99999986 45689999999999999999999999 999999999999999999999999999987643221
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......+||+.|||||++.+..+.. +++||||+||++|
T Consensus 159 ----~~~~~~~~GT~~Y~APE~~~~~~~~~--~~~DiwSlGvily 197 (271)
T d1nvra_ 159 ----ERLLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLT 197 (271)
T ss_dssp ----ECCBCCCCSCGGGSCTHHHHCSSBCH--HHHHHHHHHHHHH
T ss_pred ----cccccceeeCcCccCHhHhcCCCCCC--CceeeeHhHHHHH
Confidence 12234578999999999998877632 3599999999999
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-43 Score=356.40 Aligned_cols=174 Identities=20% Similarity=0.310 Sum_probs=154.6
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||+||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus 5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~iv 84 (263)
T d2j4za1 5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 84 (263)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEE
Confidence 35799999999999999997 8999986442 33456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||||++|++. ...+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.....
T Consensus 85 mEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~-- 159 (263)
T d2j4za1 85 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 159 (263)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC--
T ss_pred EeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecCCC--
Confidence 9999999985 46799999999999999999999999 9999999999999999999999999999865321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+||+.|||||++.+..++. ++||||+||++|
T Consensus 160 --------~~~~~~Gt~~Y~APE~~~~~~~~~---~~DiwSlGvily 195 (263)
T d2j4za1 160 --------RRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCY 195 (263)
T ss_dssp --------CCEETTEEGGGCCHHHHTTCCCCT---THHHHHHHHHHH
T ss_pred --------cccccCCCCcccCHHHHcCCCCCc---hhhhhhHhHHHH
Confidence 123467999999999999887755 499999999999
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-43 Score=361.60 Aligned_cols=176 Identities=20% Similarity=0.297 Sum_probs=157.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|+..+.||+|+||+||+ ||||++........+.+.+|++++++++|||||++++++.+.+..|+||||
T Consensus 19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy 98 (293)
T d1yhwa1 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (293)
T ss_dssp TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence 35799999999999999997 999998766655667899999999999999999999999999999999999
Q ss_pred ccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 550 ISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 550 ~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
|++|+|. ...+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 99 ~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~----- 170 (293)
T d1yhwa1 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----- 170 (293)
T ss_dssp CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-----
T ss_pred cCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeecccc-----
Confidence 9999986 56799999999999999999999999 99999999999999999999999999998764322
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|||||++.+..++. ++||||+||++|
T Consensus 171 ---~~~~~~~gt~~Y~aPE~~~~~~~~~---~~DiwSlGvily 207 (293)
T d1yhwa1 171 ---SKRSTMVGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAI 207 (293)
T ss_dssp ---CCBCCCCSCGGGCCHHHHSSSCBCT---HHHHHHHHHHHH
T ss_pred ---ccccccccCCCccChhhhcCCCCCc---hhceehHhHHHH
Confidence 1223468999999999999887755 599999999999
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-42 Score=357.42 Aligned_cols=222 Identities=20% Similarity=0.236 Sum_probs=174.1
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||+||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 5799999999999999997 9999986542 334567999999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|||++|+|. ...+++.++..++.|++.||+|||++ +||||||||+|||+++++.+||+|||+|+.+.....
T Consensus 88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~- 163 (288)
T d1uu3a_ 88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK- 163 (288)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecccCCc-
Confidence 999999985 56799999999999999999999999 999999999999999999999999999987643221
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-----------ccccchhhccccCCCccHH
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-----------KQNKSILKSAGIKGKKTVS 691 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-----------~~~~~i~~~~~~~~~~~~~ 691 (746)
.....+.+||+.|||||++.+..++.+ +||||+||++|.... +....|............+
T Consensus 164 -----~~~~~~~~GT~~Y~APE~~~~~~~~~~---~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~ 235 (288)
T d1uu3a_ 164 -----QARANSFVGTAQYVSPELLTEKSACKS---SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP 235 (288)
T ss_dssp -----------CCCCGGGCCHHHHHTCCCCHH---HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCTTCCH
T ss_pred -----ccccccccCCccccCceeeccCCCCcc---cceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCCccCCH
Confidence 122334789999999999998877655 999999999992111 1112222222222234555
Q ss_pred HHHHhhCCCCCCCCC-CCCccch
Q 041467 692 FFLSLLSPSCSVFPL-TPSSNSF 713 (746)
Q Consensus 692 ~~~~~~~~~~~~~p~-~p~~~~~ 713 (746)
.+..++..|....|. ||+..+.
T Consensus 236 ~~~~li~~~L~~dP~~R~t~~e~ 258 (288)
T d1uu3a_ 236 KARDLVEKLLVLDATKRLGCEEM 258 (288)
T ss_dssp HHHHHHHTTSCSSGGGSTTSGGG
T ss_pred HHHHHHHHHccCCHhHCcCHHHH
Confidence 566666666666666 7776653
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.3e-43 Score=361.25 Aligned_cols=234 Identities=19% Similarity=0.260 Sum_probs=183.9
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
+.-..++|+..+.||+|+||+||+ ||||+++... ...++|.+|+++|++++|||||+++|+|.+.+..++
T Consensus 12 wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 90 (287)
T d1opja_ 12 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90 (287)
T ss_dssp TBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred cEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEE
Confidence 334456788899999999999997 9999986442 345679999999999999999999999999999999
Q ss_pred hhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 546 DFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 546 v~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
|||||++|++. ...+++..+..++.|||.||+|||++ +|+||||||+|||+++++.+||+|||+|+....
T Consensus 91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~ 167 (287)
T d1opja_ 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 167 (287)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCS
T ss_pred EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecCC
Confidence 99999999985 35789999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-----------ccccchhhc--cccC
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-----------KQNKSILKS--AGIK 685 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-----------~~~~~i~~~--~~~~ 685 (746)
... .......||+.|||||++.+..++.+ +|||||||++|.... .+...+... .+..
T Consensus 168 ~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~k---~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~ 237 (287)
T d1opja_ 168 DTY-------TAHAGAKFPIKWTAPESLAYNKFSIK---SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 237 (287)
T ss_dssp SSS-------EEETTEEECGGGCCHHHHHHCCCSHH---HHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC
T ss_pred CCc-------eeeccccccccccChHHHcCCCCCch---hhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCC
Confidence 221 22334568999999999998877655 999999999981110 111111111 1222
Q ss_pred CCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCC
Q 041467 686 GKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPS 722 (746)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~ 722 (746)
...+.+.+..++..|+...|+ ||++.++...++.+..
T Consensus 238 ~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~ 275 (287)
T d1opja_ 238 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275 (287)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred CccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 234556667777777777777 8898887766655543
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=8.2e-43 Score=361.36 Aligned_cols=232 Identities=21% Similarity=0.234 Sum_probs=170.2
Q ss_pred cCCCCCCeEeecCCeeEEE------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 480 NNFSPANKIREGGFNIVYN------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
++|+..+.||+|+||+||+ ||||++... .....++|.+|+++|++++|||||+++|+|...+..++|
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv 105 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII 105 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 4567788999999999996 788887543 344556899999999999999999999999999999999
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||++|+|. ...+++.++..++.|||+||+|||++ +|+||||||+|||++.++++||+|||+|+.+....
T Consensus 106 ~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~ 182 (299)
T d1jpaa_ 106 TEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 182 (299)
T ss_dssp EECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEECCCCcEEECCcccceEccCCC
Confidence 9999999986 34689999999999999999999999 99999999999999999999999999998875432
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--ccc------ccc----hhh-ccccCCC
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQ------NKS----ILK-SAGIKGK 687 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~------~~~----i~~-~~~~~~~ 687 (746)
.. ..........||+.|||||++.+..++.+ +|||||||++|... ... ... +.. .......
T Consensus 183 ~~---~~~~~~~~~~~t~~y~aPE~~~~~~~~~~---sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~ 256 (299)
T d1jpaa_ 183 SD---PTYTSALGGKIPIRWTAPEAIQYRKFTSA---SDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPM 256 (299)
T ss_dssp ----------------CGGGSCHHHHHSCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCT
T ss_pred Cc---ceeeecccccCCccccCHHHHhcCCCCcc---cccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc
Confidence 21 11122334568999999999998877655 99999999999221 111 011 111 1122334
Q ss_pred ccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 688 KTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
.+.+.+..++..|+...|. ||++.++...++++
T Consensus 257 ~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~ 290 (299)
T d1jpaa_ 257 DCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 290 (299)
T ss_dssp TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 4556677777777777777 89988877666554
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.6e-42 Score=357.44 Aligned_cols=174 Identities=23% Similarity=0.283 Sum_probs=153.5
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
..|+..+.||+|+||+||+ ||||++.... ....+.+.+|+++|++++|||||++++++.+.+..|+||
T Consensus 15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~ 94 (309)
T d1u5ra_ 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (309)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence 3588999999999999997 9999986432 344567999999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|||.+|++. ...+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+....
T Consensus 95 E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~---- 167 (309)
T d1u5ra_ 95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---- 167 (309)
T ss_dssp ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS----
T ss_pred EecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCC----
Confidence 999999875 56799999999999999999999999 999999999999999999999999999986421
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+||+.|||||++.+.....++.++|||||||++|
T Consensus 168 --------~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvily 205 (309)
T d1u5ra_ 168 --------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205 (309)
T ss_dssp --------BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHH
T ss_pred --------CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHH
Confidence 12367999999999998655444566799999999999
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-42 Score=352.90 Aligned_cols=226 Identities=18% Similarity=0.274 Sum_probs=168.9
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
++|+..+.||+|+||.||+ ||||+++.. ....++|.+|++++++++|||||+++|+|...+..++||||++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~ 83 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 83 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence 4688899999999999997 999998643 2335679999999999999999999999999999999999999
Q ss_pred CCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 552 NGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 552 ~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
+|+|. ...+++..+..++.|||+||+|||++ +|+||||||+|||+|+++.+||+|||+|+.......
T Consensus 84 ~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~---- 156 (263)
T d1sm2a_ 84 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---- 156 (263)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC--------------
T ss_pred CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCCCc----
Confidence 99986 35688999999999999999999999 999999999999999999999999999987643222
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceeecccc-c-------cccchh----h-ccccCCCccHHH
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-K-------QNKSIL----K-SAGIKGKKTVSF 692 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~-------~~~~i~----~-~~~~~~~~~~~~ 692 (746)
.......||+.|||||++.+..++.+ +|||||||++|.... . ...++. . .....+..+.+.
T Consensus 157 ---~~~~~~~gt~~y~aPE~l~~~~~~~k---~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~ 230 (263)
T d1sm2a_ 157 ---TSSTGTKFPVKWASPEVFSFSRYSSK---SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 230 (263)
T ss_dssp -----------CTTSCCHHHHTTCCCCHH---HHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHH
T ss_pred ---eeecceecCcccCChHHhcCCCCCch---hhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHH
Confidence 12234679999999999998887655 999999999982111 0 001111 1 111222344556
Q ss_pred HHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 693 FLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 693 ~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
+..++..|+...|+ ||++.++...+++
T Consensus 231 l~~li~~cl~~~p~~Rps~~~il~~L~~ 258 (263)
T d1sm2a_ 231 VYQIMNHCWKERPEDRPAFSRLLRQLAE 258 (263)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 66777777777777 8888876655443
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-42 Score=354.33 Aligned_cols=178 Identities=21% Similarity=0.283 Sum_probs=154.9
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
+.|+..+.||+|+||.||+ ||||++........+.+.+|+++|++++|||||++++++.+.+..++|||||
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~ 91 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 91 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence 4688899999999999997 8999987666666778999999999999999999999999999999999999
Q ss_pred cCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 551 SNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 551 ~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~------ 162 (288)
T d2jfla1 92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR------ 162 (288)
T ss_dssp TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECHH------
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccCC------
Confidence 999985 35699999999999999999999999 999999999999999999999999999976521
Q ss_pred ccccccccccccccccccccccccccc--ccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNL--ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~--~~~~~~~DiwSlG~i~~ 668 (746)
......+.+||+.|||||++.+... ..++.++||||+||++|
T Consensus 163 --~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvily 206 (288)
T d2jfla1 163 --TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 206 (288)
T ss_dssp --HHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHH
T ss_pred --CcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHH
Confidence 1122335789999999999964322 22456799999999999
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-42 Score=352.48 Aligned_cols=226 Identities=18% Similarity=0.291 Sum_probs=176.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
..++|+..+.||+|+||.||+ ||||+++... ...+.|.+|++++++++|||||+++|++.+ +..++||||
T Consensus 11 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey 88 (272)
T d1qpca_ 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (272)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred CHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEe
Confidence 456788899999999999997 9999986432 345679999999999999999999998765 567899999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
+++|+|. ...+++.++..++.|||+||+|||++ +|+||||||+|||+++++.+||+|||+|+.+.....
T Consensus 89 ~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~- 164 (272)
T d1qpca_ 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY- 164 (272)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-
T ss_pred CCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccCCcc-
Confidence 9999985 23589999999999999999999999 999999999999999999999999999998643221
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------c----cchhh-ccccCCCcc
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------N----KSILK-SAGIKGKKT 689 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~----~~i~~-~~~~~~~~~ 689 (746)
.......||+.|||||++.+..++.+ +|||||||++|.... .. . ..+.. ..+.....+
T Consensus 165 ------~~~~~~~gt~~y~APE~~~~~~~~~~---sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~ 235 (272)
T d1qpca_ 165 ------TAREGAKFPIKWTAPEAINYGTFTIK---SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235 (272)
T ss_dssp ------ECCTTCCCCTTTSCHHHHHHCEECHH---HHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTC
T ss_pred ------ccccccCCcccccChHHHhCCCCCch---hhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccC
Confidence 22334678999999999988877654 999999999992111 00 0 11111 112222345
Q ss_pred HHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 690 VSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 690 ~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.+.+..++..|+...|. ||++.++...++
T Consensus 236 ~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~ 265 (272)
T d1qpca_ 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (272)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence 55666777777777777 888887765443
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-42 Score=351.36 Aligned_cols=179 Identities=18% Similarity=0.285 Sum_probs=142.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEec--CCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSS--IDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~~~l 545 (746)
.++|+..+.||+|+||+||+ ||||++.... ....+.+.+|++++++++|||||++++++.+ .+..|+
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i 82 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 82 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence 36799999999999999997 9999986543 3345678999999999999999999999975 346789
Q ss_pred hhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEEcCCCCCCeeeCCCCcEEEccccccc
Q 041467 546 DFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHC--QPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614 (746)
Q Consensus 546 v~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~--~~~ivHrDlkp~NILl~~~~~~ki~DfGla~ 614 (746)
|||||++|+|. ...+++.++..++.||+.||+|||++. ..+||||||||+|||++.++.+||+|||+|+
T Consensus 83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~ 162 (269)
T d2java1 83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 162 (269)
T ss_dssp EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence 99999999985 346999999999999999999999972 1249999999999999999999999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.+.... ....+.+||+.|||||++.+..++.+ +|||||||++|
T Consensus 163 ~~~~~~--------~~~~~~~gt~~Y~APE~l~~~~~~~~---~DIwSlGvily 205 (269)
T d2java1 163 ILNHDT--------SFAKAFVGTPYYMSPEQMNRMSYNEK---SDIWSLGCLLY 205 (269)
T ss_dssp HC-------------------CCCSCCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred ecccCC--------CccccCCCCcccCCHHHHcCCCCChH---HHHHhhCHHHH
Confidence 864321 12234789999999999988877654 99999999999
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-42 Score=352.61 Aligned_cols=231 Identities=22% Similarity=0.253 Sum_probs=175.2
Q ss_pred cCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
+.|+..+.||+|+||.||+ ||||++.... ....+.|.+|++++++++|||||+++|+|.+.+..++
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~ 86 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 86 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence 4577889999999999996 7999886432 3345679999999999999999999999999999999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+.+|.+. ...+++.++..++.||+.|++|||+. +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 87 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~ 163 (283)
T d1mqba_ 87 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 163 (283)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhcccCC
Confidence 99999999875 45789999999999999999999999 9999999999999999999999999999876443
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchhh---c--cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSILK---S--AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~~---~--~~~~~ 686 (746)
... ........||+.|||||++.+..++.+ +|||||||++|.... .. ..+++. . .+...
T Consensus 164 ~~~-----~~~~~~~~gt~~Y~APE~l~~~~~~~~---sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~ 235 (283)
T d1mqba_ 164 PEA-----TYTTSGGKIPIRWTAPEAISYRKFTSA---SDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP 235 (283)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC
T ss_pred Ccc-----ceEeccCCCCccccCHHHHccCCCCCc---ccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCc
Confidence 221 122334678999999999998877655 999999999992111 00 011111 1 12222
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
..+.+.+..++..|+...|+ ||++.++...++++.
T Consensus 236 ~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~ 271 (283)
T d1mqba_ 236 MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 271 (283)
T ss_dssp TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHh
Confidence 44556777888888888887 999998877666543
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-42 Score=358.17 Aligned_cols=175 Identities=19% Similarity=0.289 Sum_probs=153.5
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||+||+ ||||+++... ....+.+.+|+++|++++|||||+++++|.+.+..++|||
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE 84 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 84 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 46899999999999999997 9999986542 3345678999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
||++|+|. ...+++..+..++.|++.||+|||+++ +|+||||||+|||++++|++||+|||+|+.+...
T Consensus 85 y~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~--~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~---- 158 (322)
T d1s9ja_ 85 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 158 (322)
T ss_dssp CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----
T ss_pred cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEccccCHHHeeECCCCCEEEeeCCCccccCCC----
Confidence 99999986 457999999999999999999999732 8999999999999999999999999999876321
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...+.+||++|||||++.+..|+.+ +||||+||++|
T Consensus 159 ------~~~~~~GT~~Y~APEvl~~~~y~~~---~DiWSlGvil~ 194 (322)
T d1s9ja_ 159 ------MANSFVGTRSYMSPERLQGTHYSVQ---SDIWSMGLSLV 194 (322)
T ss_dssp ------TC---CCSSCCCCHHHHHCSCCCTT---HHHHHHHHHHH
T ss_pred ------ccccccCCccccCchHHcCCCCCcH---HHHHHHHHHHH
Confidence 2234789999999999999877655 99999999999
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4e-41 Score=350.90 Aligned_cols=217 Identities=21% Similarity=0.240 Sum_probs=178.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||+||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus 3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeE
Confidence 46799999999999999997 9999986542 33457799999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||||++|++. ...+++..+..++.||+.|++|||++ +|+||||||+|||++.+|.+||+|||+|+.....
T Consensus 83 mE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~-- 157 (316)
T d1fota_ 83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-- 157 (316)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred eeecCCccccccccccccccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEeccc--
Confidence 9999999875 56789999999999999999999999 9999999999999999999999999999876321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccc-----------cccchhhcc----ccCC
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKK-----------QNKSILKSA----GIKG 686 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~-----------~~~~i~~~~----~~~~ 686 (746)
..+.+||+.|||||++.+..++.+ +||||+||++|..... ....+.... +..+
T Consensus 158 ---------~~~~~Gt~~Y~APE~l~~~~y~~~---~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s 225 (316)
T d1fota_ 158 ---------TYTLCGTPDYIAPEVVSTKPYNKS---IDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFN 225 (316)
T ss_dssp ---------BCCCCSCTTTCCHHHHTTCCBCTT---HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSC
T ss_pred ---------cccccCcccccCHHHHcCCCCCch---hhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCCCC
Confidence 234789999999999998877654 9999999999921111 111222211 1223
Q ss_pred CccHHHHHHhhCCCCCCCCC--CCCccc
Q 041467 687 KKTVSFFLSLLSPSCSVFPL--TPSSNS 712 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~--~p~~~~ 712 (746)
.+..+.+..|+..++.+|+. +|+..+
T Consensus 226 ~~~~~li~~~L~~dp~~R~~~~r~t~~~ 253 (316)
T d1fota_ 226 EDVKDLLSRLITRDLSQRLGNLQNGTED 253 (316)
T ss_dssp HHHHHHHHHHTCSCTTTCTTSSTTTTHH
T ss_pred HHHHHHHHHHhhhCHHhccccchhhHHH
Confidence 46677888999999988875 666664
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-41 Score=353.34 Aligned_cols=214 Identities=21% Similarity=0.187 Sum_probs=174.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++|++++|||||++++++.+.+..|+|
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 46799999999999999997 9999987542 33457789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||||++|+|. ...+++.+++.++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+......
T Consensus 84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~- 159 (337)
T d1o6la_ 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG- 159 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-
T ss_pred eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccccCC-
Confidence 9999999986 56789999999999999999999999 99999999999999999999999999998653221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhccc----cCC
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSAG----IKG 686 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~~----~~~ 686 (746)
......+||+.|||||++.+..|+.+ +||||+||++|...... ...+..... ..+
T Consensus 160 -------~~~~~~~GT~~Y~aPE~~~~~~y~~~---~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~~~s 229 (337)
T d1o6la_ 160 -------ATMKTFCGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLS 229 (337)
T ss_dssp -------CCBCCCEECGGGCCGGGGSSSCBCTT---HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSC
T ss_pred -------cccccceeCHHHhhhhhccCCCCChh---hcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCccCC
Confidence 22345789999999999999888655 99999999999211111 112221111 223
Q ss_pred CccHHHHHHhhCCCCCCCCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+..+.+..|+.++|..|+.
T Consensus 230 ~~~~dli~~~L~~dP~~R~~ 249 (337)
T d1o6la_ 230 PEAKSLLAGLLKKDPKQRLG 249 (337)
T ss_dssp HHHHHHHHHHTCSSTTTSTT
T ss_pred HHHHHHHHhhccCCchhhcc
Confidence 45566777888877777765
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-41 Score=348.36 Aligned_cols=226 Identities=18% Similarity=0.237 Sum_probs=176.6
Q ss_pred cCCCCCC-eEeecCCeeEEE-----------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 480 NNFSPAN-KIREGGFNIVYN-----------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 480 ~~~~~~~-~ig~g~~g~v~~-----------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
++|...+ .||+|+||.||+ ||||+++... ....++|.+|+++|++++|||||+++|+|.+ +..++|
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv 86 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 86 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence 4556666 499999999997 8999986442 3456789999999999999999999999875 567899
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||++|+|. ...+++.++..++.|||+||+|||++ +|+||||||+||+++.++.+||+|||+|+.+....
T Consensus 87 mE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~ 163 (285)
T d1u59a_ 87 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 163 (285)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhcccccc
Confidence 9999999985 34689999999999999999999999 99999999999999999999999999999875432
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceeecc-c-ccc------ccchhh-----ccccCCC
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALN-E-KKQ------NKSILK-----SAGIKGK 687 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~-~-~~~------~~~i~~-----~~~~~~~ 687 (746)
.. ........||+.|||||++.+..++.+ +|||||||++|.. . ... ..++.. ..+..+.
T Consensus 164 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~k---sDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~ 235 (285)
T d1u59a_ 164 SY-----YTARSAGKWPLKWYAPECINFRKFSSR---SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP 235 (285)
T ss_dssp CE-----ECCCCSSCCCGGGCCHHHHHHCEECHH---HHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCT
T ss_pred cc-----cccccccccCccccChHHHhCCCCCcc---chhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence 21 122334678999999999988877655 9999999999832 1 111 111111 1122234
Q ss_pred ccHHHHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 688 KTVSFFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
.+.+.+..++..|+...|+ ||++.++...+
T Consensus 236 ~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L 266 (285)
T d1u59a_ 236 ECPPELYALMSDCWIYKWEDRPDFLTVEQRM 266 (285)
T ss_dssp TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 5566777888888888887 99888766443
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-41 Score=344.80 Aligned_cols=218 Identities=19% Similarity=0.232 Sum_probs=166.2
Q ss_pred CeEeecCCeeEEE-----------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN-----------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~-----------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||+||+ ||||+++... ....++|.+|+++|++++|||||+++|+|.. +..++||||+++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 4799999999996 8999986432 3345679999999999999999999999965 457899999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|+|. ...+++.++..++.|||+||+|||+. +||||||||+|||++.++.+||+|||+|+.+......
T Consensus 92 g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~----- 163 (277)
T d1xbba_ 92 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----- 163 (277)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE-----
T ss_pred CcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhccccccc-----
Confidence 9986 56799999999999999999999999 9999999999999999999999999999876433221
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceeeccc--ccc------ccch---hh--ccccCCCccHHHHH
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQ------NKSI---LK--SAGIKGKKTVSFFL 694 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~------~~~i---~~--~~~~~~~~~~~~~~ 694 (746)
........||+.|||||++.+..++.+ +|||||||++|... ... ..++ +. ..+..+..+.+.+.
T Consensus 164 ~~~~~~~~gt~~y~APE~l~~~~~~~~---sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~ 240 (277)
T d1xbba_ 164 YKAQTHGKWPVKWYAPECINYYKFSSK---SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY 240 (277)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHH---HHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred cccccccCCCceecCchhhcCCCCCch---hhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHH
Confidence 122334679999999999998877655 99999999998221 111 0111 11 11122234456666
Q ss_pred HhhCCCCCCCCC-CCCccchhh
Q 041467 695 SLLSPSCSVFPL-TPSSNSFTL 715 (746)
Q Consensus 695 ~~~~~~~~~~p~-~p~~~~~~~ 715 (746)
.++..|+...|. ||++.++..
T Consensus 241 ~li~~cl~~dp~~RPs~~~i~~ 262 (277)
T d1xbba_ 241 DLMNLCWTYDVENRPGFAAVEL 262 (277)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHH
Confidence 777777777777 888776543
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-40 Score=338.84 Aligned_cols=171 Identities=22% Similarity=0.357 Sum_probs=143.9
Q ss_pred CCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEec----CCcccchh
Q 041467 483 SPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSS----IDFEGFDF 547 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----~~~~~lv~ 547 (746)
+..+.||+|+||+||+ ||+|++.... ....+.+.+|+++|++++|||||+++++|.+ ....++||
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm 91 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 91 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence 4566899999999997 8999886543 3345679999999999999999999999875 33578999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-CCCcEEEccccccccccCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ki~DfGla~~~~~~~~ 621 (746)
||+++|+|. ...+++.+++.++.||++||+|||++ .++|+||||||+|||++ +++.+||+|||+|+....
T Consensus 92 E~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~--- 167 (270)
T d1t4ha_ 92 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA--- 167 (270)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT---
T ss_pred eCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC---
Confidence 999999986 45789999999999999999999998 11399999999999996 579999999999986421
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.+||+.|||||++.+. + +.++||||+||++|
T Consensus 168 -------~~~~~~~GT~~Y~aPE~~~~~-~---~~~~DIwSlGvily 203 (270)
T d1t4ha_ 168 -------SFAKAVIGTPEFMAPEMYEEK-Y---DESVDVYAFGMCML 203 (270)
T ss_dssp -------TSBEESCSSCCCCCGGGGGTC-C---CTHHHHHHHHHHHH
T ss_pred -------CccCCcccCccccCHHHhCCC-C---CCcCchhhHHHHHH
Confidence 122347899999999998653 5 44699999999999
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-41 Score=346.05 Aligned_cols=228 Identities=21% Similarity=0.267 Sum_probs=173.7
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.++|+..+.||+|+||.||+ ||||++.... ...+.|.+|+.++++++|||||+++|+|.+ +..++||||+
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~ 93 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 93 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEec
Confidence 46799999999999999997 9999986443 334679999999999999999999999855 5688999999
Q ss_pred cCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++|++. ...++|.+++.++.|||.|++|||+. +|+||||||+|||+|+++++||+|||+|+.+.....
T Consensus 94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~-- 168 (285)
T d1fmka3 94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 168 (285)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCCCc--
Confidence 999875 34689999999999999999999999 999999999999999999999999999987643221
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeecccc--------cccc----chhhc-cccCCCccH
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--------KQNK----SILKS-AGIKGKKTV 690 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--------~~~~----~i~~~-~~~~~~~~~ 690 (746)
.......||+.|||||++....++.+ +|||||||++|.... .... .+... .......+.
T Consensus 169 -----~~~~~~~gt~~y~aPE~~~~~~~~~k---sDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~ 240 (285)
T d1fmka3 169 -----TARQGAKFPIKWTAPEAALYGRFTIK---SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 240 (285)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSC
T ss_pred -----eeeccccccccccChHHHhCCCCCcH---HhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccC
Confidence 12234678999999999998887655 999999999992111 0011 11111 112234455
Q ss_pred HHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 691 SFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 691 ~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
+.+..++..|+...|+ ||++.++...++...
T Consensus 241 ~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~ 272 (285)
T d1fmka3 241 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 272 (285)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence 6677777777777777 999998876555433
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=7.8e-41 Score=353.57 Aligned_cols=175 Identities=19% Similarity=0.216 Sum_probs=155.5
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|+..+.||+|+||.||+ ||||++........+.+.+|+++|++++|||||+++++|.+.+..|+||||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 107 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 45799999999999999997 999998765555566789999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC--CCCcEEEccccccccccCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD--QDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~--~~~~~ki~DfGla~~~~~~~~ 621 (746)
|++|+|. ...+++.++..++.||+.||+|||++ +||||||||+|||++ .++.+||+|||+|+.+...
T Consensus 108 ~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~-- 182 (352)
T d1koba_ 108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD-- 182 (352)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--
T ss_pred CCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecCCC--
Confidence 9999984 33689999999999999999999999 999999999999997 6789999999999886432
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|||||++.+..++.+ +||||+||++|
T Consensus 183 -------~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwSlGvily 219 (352)
T d1koba_ 183 -------EIVKVTTATAEFAAPEIVDREPVGFY---TDMWAIGVLGY 219 (352)
T ss_dssp -------SCEEEECSSGGGCCHHHHTTCCBCHH---HHHHHHHHHHH
T ss_pred -------CceeeccCcccccCHHHHcCCCCCCc---cchHHHHHHHH
Confidence 22334679999999999998887655 99999999999
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-41 Score=338.21 Aligned_cols=221 Identities=19% Similarity=0.271 Sum_probs=178.2
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
++|+..+.||+|+||+||+ ||||+++... ...+.|.+|++++++++|||||+++|+|.+.+..++||||++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 82 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence 5789999999999999997 9999987543 234679999999999999999999999999999999999999
Q ss_pred CCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 552 NGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 552 ~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
+|++. ...+++..+.+++.|+|+||+|||+. +|+||||||+||++++++.+||+|||+|+.+.....
T Consensus 83 ~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~---- 155 (258)
T d1k2pa_ 83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY---- 155 (258)
T ss_dssp TEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSC----
T ss_pred CCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccCCCc----
Confidence 99875 45789999999999999999999999 999999999999999999999999999987643322
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceeeccc-c-cc----------ccchhh-ccccCCCccHHH
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE-K-KQ----------NKSILK-SAGIKGKKTVSF 692 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~-~-~~----------~~~i~~-~~~~~~~~~~~~ 692 (746)
.......||+.|||||++.+..++.+ +|||||||++|... . .. ...+.. .....+....+.
T Consensus 156 ---~~~~~~~~t~~y~aPE~~~~~~~~~k---sDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~ 229 (258)
T d1k2pa_ 156 ---TSSVGSKFPVRWSPPEVLMYSKFSSK---SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 229 (258)
T ss_dssp ---CCCCCSCCCGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHH
T ss_pred ---eeecccCCCCCcCCcHHhcCCCCCcc---eeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccccHH
Confidence 12234679999999999998887655 99999999998221 1 11 011111 122233445567
Q ss_pred HHHhhCCCCCCCCC-CCCccchh
Q 041467 693 FLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 693 ~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
+..++..|+...|+ ||++.++.
T Consensus 230 l~~li~~cl~~dP~~RPt~~eil 252 (258)
T d1k2pa_ 230 VYTIMYSCWHEKADERPTFKILL 252 (258)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHH
T ss_pred HHHHHHHHccCCHhHCcCHHHHH
Confidence 77888888888887 88877654
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.2e-40 Score=351.72 Aligned_cols=175 Identities=19% Similarity=0.247 Sum_probs=155.6
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|++.+.||+|+||.||+ ||||++........+.+.+|++++++++|||||++++++.+.+..|+||||
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 104 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 104 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 46899999999999999997 899998766555667899999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC--CCCcEEEccccccccccCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD--QDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~--~~~~~ki~DfGla~~~~~~~~ 621 (746)
|++|+|. ...+++.++..++.||+.||+|||++ +||||||||+|||++ .++.+||+|||+|+.+...
T Consensus 105 ~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~-- 179 (350)
T d1koaa2 105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 179 (350)
T ss_dssp CCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT--
T ss_pred CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchheecccc--
Confidence 9999984 34689999999999999999999999 999999999999995 4689999999999876332
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|||||++.+..++.+ +||||+||++|
T Consensus 180 -------~~~~~~~gT~~Y~aPEv~~~~~~~~~---~DiwSlGvily 216 (350)
T d1koaa2 180 -------QSVKVTTGTAEFAAPEVAEGKPVGYY---TDMWSVGVLSY 216 (350)
T ss_dssp -------SCEEEECSCTTTCCHHHHHTCCBCHH---HHHHHHHHHHH
T ss_pred -------cccceecCcccccCHHHHcCCCCChh---HhhhhhhHHHH
Confidence 22334789999999999998887655 99999999998
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.8e-41 Score=349.57 Aligned_cols=176 Identities=26% Similarity=0.309 Sum_probs=138.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
..+.|+..+.||+|+||+||+ ||||++.... ....+.+.+|+++|++++|||||++++++.+.+..|+||
T Consensus 7 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvm 86 (307)
T d1a06a_ 7 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM 86 (307)
T ss_dssp GGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 346799999999999999997 9999986543 233456889999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC---CCCcEEEccccccccccCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~---~~~~~ki~DfGla~~~~~~ 619 (746)
|||++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+||++. +++.+||+|||+|+.....
T Consensus 87 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~ 163 (307)
T d1a06a_ 87 QLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 163 (307)
T ss_dssp CCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC---------
T ss_pred eccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEccCC
Confidence 999999985 45799999999999999999999999 999999999999994 5789999999999865321
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.+||+.|||||++.+..++. ++||||+||++|
T Consensus 164 ---------~~~~~~~GT~~y~APE~~~~~~~~~---~~DiwSlGvily 200 (307)
T d1a06a_ 164 ---------SVLSTACGTPGYVAPEVLAQKPYSK---AVDCWSIGVIAY 200 (307)
T ss_dssp ------------------CTTSCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred ---------CeeeeeeeCccccCcHHHcCCCCCc---HHHhhhhhHHHH
Confidence 1223478999999999999887755 599999999999
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-41 Score=351.81 Aligned_cols=228 Identities=18% Similarity=0.205 Sum_probs=173.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------------EEeehhhhh-hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCC
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------------VAMKVANLK-QKEASRSFAAEFNALRNI-RHRNLIKIITICSSID 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~ 541 (746)
..++|+..+.||+|+||+||+ ||||++... .....+.+.+|+++++++ +|||||+++++|.+.+
T Consensus 35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~ 114 (325)
T d1rjba_ 35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 114 (325)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence 346788999999999999996 788887543 334456799999999998 8999999999999999
Q ss_pred cccchhhhccCCcccc----------------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCC
Q 041467 542 FEGFDFKAISNGQLRL----------------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLK 593 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~~----------------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlk 593 (746)
..++|||||++|+|.. ..+++.+++.++.||++||+|||++ +|||||||
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlK 191 (325)
T d1rjba_ 115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 191 (325)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCc
Confidence 9999999999999851 2478999999999999999999999 99999999
Q ss_pred CCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--
Q 041467 594 PSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE-- 671 (746)
Q Consensus 594 p~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~-- 671 (746)
|+||+++.++.+||+|||+|+....... .....+..||+.|||||++.+..++.+ +|||||||++|...
T Consensus 192 p~Nill~~~~~~Kl~DFGla~~~~~~~~------~~~~~~~~gt~~y~aPE~l~~~~~~~~---~DiwS~Gvil~emlt~ 262 (325)
T d1rjba_ 192 ARNVLVTHGKVVKICDFGLARDIMSDSN------YVVRGNARLPVKWMAPESLFEGIYTIK---SDVWSYGILLWEIFSL 262 (325)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTT------SEEETTEEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHTTT
T ss_pred hhccccccCCeEEEeeccccccccCCCc------eeeeccccCCCccCChHHHcCCCCCcc---eeccchhHHHHHHHhC
Confidence 9999999999999999999987644322 122234678999999999998887655 99999999999221
Q ss_pred ccc----------ccchhhc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 672 KKQ----------NKSILKS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 672 ~~~----------~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
... ...+... .+..+..+.+.+..++..|+...|+ ||++.++...+
T Consensus 263 g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L 321 (325)
T d1rjba_ 263 GVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321 (325)
T ss_dssp SCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 111 1111111 1112234445566666666666666 78887766544
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.3e-40 Score=349.99 Aligned_cols=218 Identities=19% Similarity=0.201 Sum_probs=178.6
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++|+.++|||||++++++.+....++|
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence 36899999999999999997 8999986432 33456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+.+|++. ...+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+...
T Consensus 120 ~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~-- 194 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred cccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeecccc--
Confidence 9999999985 45799999999999999999999999 9999999999999999999999999999876321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccc-----------cccchhhccc----cCC
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKK-----------QNKSILKSAG----IKG 686 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~-----------~~~~i~~~~~----~~~ 686 (746)
....+||+.|||||++.+..++. ++||||+||++|..... ....+..... ..+
T Consensus 195 ---------~~~~~Gt~~Y~APE~~~~~~~~~---~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s 262 (350)
T d1rdqe_ 195 ---------TWTLCGTPEALAPEIILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFS 262 (350)
T ss_dssp ---------BCCCEECGGGCCHHHHTTCCBCT---HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCC
T ss_pred ---------cccccCccccCCHHHHcCCCCCc---cccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCCccCC
Confidence 22478999999999999887755 49999999999921111 1112222211 223
Q ss_pred CccHHHHHHhhCCCCCCCCC--CCCccch
Q 041467 687 KKTVSFFLSLLSPSCSVFPL--TPSSNSF 713 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~--~p~~~~~ 713 (746)
.+..+.+..|+..+|.+|+. ||+..++
T Consensus 263 ~~~~~li~~~L~~dP~kR~~~~r~t~~el 291 (350)
T d1rdqe_ 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291 (350)
T ss_dssp HHHHHHHHHHSCSCTTTCTTSSTTTTHHH
T ss_pred HHHHHHHHHHhhhCHHhccccccccHHHH
Confidence 46677888999999988864 6777643
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-40 Score=339.63 Aligned_cols=175 Identities=22% Similarity=0.261 Sum_probs=153.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh------hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ------KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~------~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.++|+..+.||+|+||+||+ ||||++.... ....+.+.+|+++|++++|||||+++++|.+.+..
T Consensus 9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~ 88 (293)
T d1jksa_ 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 88 (293)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 46799999999999999997 9999986432 12356799999999999999999999999999999
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC----cEEEccccccc
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV----VTHVGDLGLAK 614 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~----~~ki~DfGla~ 614 (746)
|+|||||++|+|. ...+++.+++.++.|++.||+|||++ +||||||||+||+++.++ .+|++|||+|+
T Consensus 89 ~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~ 165 (293)
T d1jksa_ 89 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 165 (293)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchhhhh
Confidence 9999999999986 45799999999999999999999999 999999999999998776 59999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ....+..||+.|||||++.+..++. ++||||+||++|
T Consensus 166 ~~~~~---------~~~~~~~~t~~y~APE~~~~~~~~~---~~DiwSlGvily 207 (293)
T d1jksa_ 166 KIDFG---------NEFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVITY 207 (293)
T ss_dssp ECTTS---------CBCSCCCCCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred hcCCC---------ccccccCCCCcccCHHHHcCCCCCC---cccchhhhHHHH
Confidence 76322 1223467999999999999877755 599999999999
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2e-40 Score=344.55 Aligned_cols=235 Identities=20% Similarity=0.275 Sum_probs=184.3
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEe
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICS 538 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~ 538 (746)
++....++|+..+.||+|+||.||+ ||||++.... .+..++|.+|++++++++||||++++++|.
T Consensus 7 ~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~ 86 (301)
T d1lufa_ 7 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 86 (301)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred hccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeec
Confidence 3444567899999999999999995 7999986543 334567999999999999999999999999
Q ss_pred cCCcccchhhhccCCccc-----------------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 041467 539 SIDFEGFDFKAISNGQLR-----------------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589 (746)
Q Consensus 539 ~~~~~~lv~e~~~~g~l~-----------------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH 589 (746)
..+..+++|||+++|++. ...+++.++..|+.|+|.||+|||+. +|||
T Consensus 87 ~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivH 163 (301)
T d1lufa_ 87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVH 163 (301)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEe
Confidence 999999999999999875 12378999999999999999999999 9999
Q ss_pred cCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeec
Q 041467 590 GDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFAL 669 (746)
Q Consensus 590 rDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~ 669 (746)
|||||+|||+|.++.+||+|||+|+.+.+... .....+..||+.|||||++.+..++.+ +|||||||++|.
T Consensus 164 rDlKp~NILld~~~~~Kl~DFGls~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~t~k---sDVwS~Gvvl~e 234 (301)
T d1lufa_ 164 RDLATRNCLVGENMVVKIADFGLSRNIYSADY------YKADGNDAIPIRWMPPESIFYNRYTTE---SDVWAYGVVLWE 234 (301)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGC------BC----CCBCGGGCCHHHHHHCCCCHH---HHHHHHHHHHHH
T ss_pred eEEcccceEECCCCcEEEccchhheeccCCcc------ccccCCCCcCcCcCCHHHHccCCCChh---hhhccchhhHHH
Confidence 99999999999999999999999987643221 122334678999999999998887655 999999999992
Q ss_pred cccc-c-------ccchhh---c--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 670 NEKK-Q-------NKSILK---S--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 670 ~~~~-~-------~~~i~~---~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
.... . ..++.. . .+.....+.+.+..++..|+...|+ ||++.++...++++
T Consensus 235 ll~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i 299 (301)
T d1lufa_ 235 IFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 299 (301)
T ss_dssp HHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred HHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence 1110 0 011111 1 1112245566777888888888888 99998887766654
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-40 Score=338.45 Aligned_cols=226 Identities=19% Similarity=0.230 Sum_probs=164.6
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
.++|+..+.||+|+||.||+ ||||+++... ....+.|.+|++++++++|||||+++|++. .+..++
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i 84 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 84 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence 46789999999999999996 7888875433 334567999999999999999999999996 467899
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|++. ...+++.+++.++.||++||+|||++ +|+||||||+||++++++.+||+|||+|+.....
T Consensus 85 v~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~ 161 (273)
T d1mp8a_ 85 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 161 (273)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheeccCC
Confidence 99999999885 44689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecc-c-ccc------ccch----hhc-cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALN-E-KKQ------NKSI----LKS-AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~-~-~~~------~~~i----~~~-~~~~~ 686 (746)
.. .......||+.|||||++.+..++.+ +|||||||++|.. . ... ..++ ... .....
T Consensus 162 ~~-------~~~~~~~gt~~y~apE~l~~~~~~~~---~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~ 231 (273)
T d1mp8a_ 162 TY-------YKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 231 (273)
T ss_dssp ----------------CCGGGCCHHHHHHCCCSHH---HHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC
T ss_pred cc-------eeccceecCcccchhhHhccCCCCCc---cccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 21 12234678999999999998877655 9999999999821 1 110 1111 111 11222
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
..+.+.+..++..|+...|. ||++.++...+.
T Consensus 232 ~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~ 264 (273)
T d1mp8a_ 232 PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 264 (273)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 34456666777777777776 888876654433
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-40 Score=344.52 Aligned_cols=224 Identities=19% Similarity=0.221 Sum_probs=170.9
Q ss_pred cCCCCCCeEeecCCeeEEE-------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN-------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
.+|+..+.||+|+||+||+ ||||++... ..+..+.|.+|++++++++|||||+++|+|.+. ..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence 4699999999999999996 788877543 344567899999999999999999999999874 5678
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
++|++.+|++. ...+++.+++.++.|||.||+|||++ +||||||||+|||++.++.+||+|||+|+.....
T Consensus 88 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~ 164 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 164 (317)
T ss_dssp EEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTT
T ss_pred EEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceecccc
Confidence 88999988874 45789999999999999999999999 9999999999999999999999999999986543
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-----------ccccchhhc--cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-----------KQNKSILKS--AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-----------~~~~~i~~~--~~~~~ 686 (746)
... .......||+.|||||++.+..++.+ +|||||||++|.... .+...++.. .+...
T Consensus 165 ~~~------~~~~~~~gt~~y~APE~l~~~~~~~~---sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p 235 (317)
T d1xkka_ 165 EKE------YHAEGGKVPIKWMALESILHRIYTHQ---SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 235 (317)
T ss_dssp CC--------------CCTTTSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCC
T ss_pred ccc------ccccccccCccccChHHHhcCCCChh---hhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 221 12234578999999999998877654 999999999982211 111112211 12222
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhh
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLL 716 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~ 716 (746)
..+.+.+..++..|+...|. ||++.++...
T Consensus 236 ~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 236 PICTIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 44556677777777777777 8888865543
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-39 Score=337.92 Aligned_cols=172 Identities=24% Similarity=0.304 Sum_probs=144.7
Q ss_pred CCCeEeecCCeeEEE---------EEeehhhhhhhh-----hhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 484 PANKIREGGFNIVYN---------VAMKVANLKQKE-----ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~---------vavK~~~~~~~~-----~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++.||+|+||+||+ ||||+++..... ..+.+.+|++++++++|||||++++++...+..|+||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 467899999999997 999998654321 235689999999999999999999999999999999999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+.+|.+. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~---- 154 (299)
T d1ua2a_ 82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN---- 154 (299)
T ss_dssp CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC----
T ss_pred hcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCCCc----
Confidence 9988765 45689999999999999999999999 99999999999999999999999999998754322
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|||||++..... ++.++||||+||++|
T Consensus 155 ----~~~~~~~gt~~y~aPE~~~~~~~--~~~~~DiwSlGvil~ 192 (299)
T d1ua2a_ 155 ----RAYTHQVVTRWYRAPELLFGARM--YGVGVDMWAVGCILA 192 (299)
T ss_dssp ----CCCCCSCCCCTTCCHHHHTTCSC--CCHHHHHHHHHHHHH
T ss_pred ----ccccceecChhhccHHHHccCCC--CChhhhhhhcchHHH
Confidence 12234689999999999976543 234599999999998
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-39 Score=339.09 Aligned_cols=213 Identities=20% Similarity=0.224 Sum_probs=168.8
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhh-cCCCCceeeEEEEEecCCcccch
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALR-NIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~-~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
++|+..+.||+|+||+||+ ||||++.... ....+.+.+|+.++. .++|||||++++++.+.+..|+|
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 5799999999999999997 8999986542 334556777877765 68999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||||++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~- 157 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD- 157 (320)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhccccc-
Confidence 9999999986 46789999999999999999999999 99999999999999999999999999998653221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-----------ccccchhhccccC----C
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-----------KQNKSILKSAGIK----G 686 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-----------~~~~~i~~~~~~~----~ 686 (746)
.......||+.|||||++.+..++. ++||||+||++|.... +....+....+.. +
T Consensus 158 -------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s 227 (320)
T d1xjda_ 158 -------AKTNTFCGTPDYIAPEILLGQKYNH---SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLE 227 (320)
T ss_dssp -------CCBCCCCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSC
T ss_pred -------ccccccCCCCCcCCHHHHcCCCCCc---hhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccCC
Confidence 2233468999999999999888765 4999999999991111 1111222222221 2
Q ss_pred CccHHHHHHhhCCCCCCCCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+..+.+.+|+..++..||.
T Consensus 228 ~~~~dli~~~L~~dP~~R~s 247 (320)
T d1xjda_ 228 KEAKDLLVKLFVREPEKRLG 247 (320)
T ss_dssp HHHHHHHHHHSCSSGGGSBT
T ss_pred HHHHHHHHHhcccCCCCCcC
Confidence 34555666777776666665
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-40 Score=340.32 Aligned_cols=237 Identities=20% Similarity=0.191 Sum_probs=170.2
Q ss_pred HHHHhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEE
Q 041467 472 HAELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIIT 535 (746)
Q Consensus 472 ~~~~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~ 535 (746)
..++.-..++|+..+.||+|+||.||+ ||||+++... ....+.+.+|+.++.++ +|||||.+++
T Consensus 5 ~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~ 84 (299)
T d1ywna1 5 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 84 (299)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeee
Confidence 344444457899999999999999996 8999986543 33456788888888777 6899999999
Q ss_pred EEecCC-cccchhhhccCCccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCC
Q 041467 536 ICSSID-FEGFDFKAISNGQLR---------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLK 593 (746)
Q Consensus 536 ~~~~~~-~~~lv~e~~~~g~l~---------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlk 593 (746)
++...+ ..++|||||++|++. ...+++.++..++.||++||+|||++ +|||||||
T Consensus 85 ~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlK 161 (299)
T d1ywna1 85 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLA 161 (299)
T ss_dssp EECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCC
T ss_pred eeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCC
Confidence 987654 688999999999985 12478999999999999999999999 99999999
Q ss_pred CCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--
Q 041467 594 PSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE-- 671 (746)
Q Consensus 594 p~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~-- 671 (746)
|+|||+++++.+||+|||+|+........ ......+||+.|||||++.+..++.+ +|||||||++|...
T Consensus 162 p~NILl~~~~~~Kl~DFGla~~~~~~~~~------~~~~~~~gt~~y~APE~l~~~~~~~~---sDiwS~Gvil~ellt~ 232 (299)
T d1ywna1 162 ARNILLSEKNVVKICDFGLARDIYKDPDY------VRKGDARLPLKWMAPETIFDRVYTIQ---SDVWSFGVLLWEIFSL 232 (299)
T ss_dssp GGGEEECGGGCEEECC------CCSCTTS------CCTTSCCCGGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTT
T ss_pred ccceeECCCCcEEEccCcchhhccccccc------cccCceeeCccccchhHhhcCCCCcc---cceeehHHHHHHHHhC
Confidence 99999999999999999999876433221 22334689999999999998877655 99999999998211
Q ss_pred ----ccc---c---cchhhc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 672 ----KKQ---N---KSILKS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 672 ----~~~---~---~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
+.. . ..+... .+.......+.+..++..|+...|. ||++.++...++.+
T Consensus 233 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~i 294 (299)
T d1ywna1 233 GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294 (299)
T ss_dssp SCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 110 0 011111 1122234445566666666666776 88888776655543
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-40 Score=334.06 Aligned_cols=226 Identities=20% Similarity=0.245 Sum_probs=166.5
Q ss_pred cCCCCCCeEeecCCeeEEE------------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 480 NNFSPANKIREGGFNIVYN------------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~------------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
++|+..+.||+|+||.||+ ||||++... ..+..++|.+|+++|++++|||||+++|+|.+ +..+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~ 86 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK 86 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence 5688999999999999996 799998654 23445689999999999999999999999976 4678
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+||||+++|++. ...+++.+++.++.|||.||+|||++ +|+||||||+||+++.++.+||+|||+|+.+..
T Consensus 87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhccc
Confidence 999999999875 45699999999999999999999999 999999999999999999999999999998644
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--cccc----------cchhhc--ccc
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQN----------KSILKS--AGI 684 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~~----------~~i~~~--~~~ 684 (746)
.... ........||..|+|||++.+..++.+ +|||||||++|... ...+ ..+... .+.
T Consensus 164 ~~~~-----~~~~~~~~~~~~~~aPE~~~~~~~~~~---~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~ 235 (273)
T d1u46a_ 164 NDDH-----YVMQEHRKVPFAWCAPESLKTRTFSHA---SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235 (273)
T ss_dssp -CCE-----EEC-----CCGGGCCHHHHHHCEEEHH---HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCC
T ss_pred CCCc-----ceecCccccCcccCCHHHHhCCCCCcc---hhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCC
Confidence 3221 122234568889999999998877655 99999999998321 1110 111111 111
Q ss_pred CCCccHHHHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
......+.+..++..|+...|+ ||++.++...+
T Consensus 236 ~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L 269 (273)
T d1u46a_ 236 RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269 (273)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 2234456666777777777777 88877665443
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5.8e-39 Score=341.01 Aligned_cols=174 Identities=25% Similarity=0.302 Sum_probs=148.4
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHH---HHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSF---AAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~---~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.++|++.+.||+|+||.||+ ||||++.... ......+ .+|+++++.++|||||++++++.+.+..
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence 46899999999999999997 9999986432 2222333 3457788888999999999999999999
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
|+|||||++|+|. ...+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 83 ~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred EEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence 9999999999986 55789999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
.. ....+||+.|||||++... .++ +++||||+||++|
T Consensus 160 ~~----------~~~~~GT~~y~APE~~~~~~~~~---~~~DiwSlGvily 197 (364)
T d1omwa3 160 KK----------PHASVGTHGYMAPEVLQKGVAYD---SSADWFSLGCMLF 197 (364)
T ss_dssp SC----------CCSCCSCGGGCCHHHHSTTCCCC---THHHHHHHHHHHH
T ss_pred Cc----------ccccccccccchhHHhhcCCCCC---cccchhHHHHHHH
Confidence 21 2346799999999999754 444 4599999999999
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=4.3e-39 Score=328.91 Aligned_cols=177 Identities=27% Similarity=0.338 Sum_probs=153.6
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---------hhhhHHHHHHHHHhhcCC-CCceeeEEEEEecC
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---------KEASRSFAAEFNALRNIR-HRNLIKIITICSSI 540 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~ 540 (746)
++|+..+.||+|+||+||+ ||||++.... +...+.+.+|+.++++++ |||||++++++.+.
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 5799999999999999997 9999986432 223456889999999997 99999999999999
Q ss_pred CcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 541 DFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
+..|+|||||++|+|. ...+++.+++.++.||++||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~ 159 (277)
T d1phka_ 83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQ 159 (277)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchheeE
Confidence 9999999999999985 56799999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccc---cCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLE---NREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~---~~~~~~DiwSlG~i~~ 668 (746)
+.... .....+||+.|+|||++.+.... .++.++||||+||++|
T Consensus 160 ~~~~~---------~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvily 206 (277)
T d1phka_ 160 LDPGE---------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 206 (277)
T ss_dssp CCTTC---------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHH
T ss_pred ccCCC---------ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhh
Confidence 63321 22347799999999999854322 2366799999999999
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-39 Score=330.56 Aligned_cols=222 Identities=20% Similarity=0.212 Sum_probs=167.0
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec-CCcccchhhhc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS-IDFEGFDFKAI 550 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~~lv~e~~ 550 (746)
.++|+..+.||+|+||.||+ ||||+++.. ...+.+.+|++++++++|||||+++|+|.+ .+..++||||+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~ 83 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 83 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred HHHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence 45788889999999999997 999998643 345679999999999999999999999965 45689999999
Q ss_pred cCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 551 SNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 551 ~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++|++. ...+++..+++++.|||.|++|||+. +|+||||||+||+++.++.+|++|||+++.....
T Consensus 84 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~---- 156 (262)
T d1byga_ 84 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 156 (262)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCCC----
Confidence 999986 23589999999999999999999999 9999999999999999999999999999865321
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeecccc--c------cccchhh-----ccccCCCccH
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--K------QNKSILK-----SAGIKGKKTV 690 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~------~~~~i~~-----~~~~~~~~~~ 690 (746)
.....||..|||||++.+..++.+ +|||||||++|.... . ....+.. ..+.......
T Consensus 157 -------~~~~~~~~~y~aPE~l~~~~~t~~---sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 226 (262)
T d1byga_ 157 -------QDTGKLPVKWTAPEALREKKFSTK---SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP 226 (262)
T ss_dssp ------------CCTTTSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCC
T ss_pred -------CccccccccCCChHHHhCCCCChH---HHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCC
Confidence 123567899999999998877655 999999999992211 1 0111111 1122223445
Q ss_pred HHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 691 SFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 691 ~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
+.+..++..|+...|. ||++.++...+++
T Consensus 227 ~~~~~li~~cl~~dP~~Rps~~~l~~~L~~ 256 (262)
T d1byga_ 227 PAVYEVMKNCWHLDAAMRPSFLQLREQLEH 256 (262)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 6677777777777777 8888876655443
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-39 Score=335.77 Aligned_cols=228 Identities=20% Similarity=0.253 Sum_probs=178.3
Q ss_pred CCeEeecCCeeEEE------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC-Ccccchhhhc
Q 041467 485 ANKIREGGFNIVYN------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSI-DFEGFDFKAI 550 (746)
Q Consensus 485 ~~~ig~g~~g~v~~------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~-~~~~lv~e~~ 550 (746)
.++||+|+||+||+ ||||+++.. .....++|.+|+++|++++|||||+++|+|... +..++|||||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~ 111 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence 46899999999996 799988643 345567899999999999999999999998764 5789999999
Q ss_pred cCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 551 SNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 551 ~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
++|++. ....++.++..++.|+|+|++|+|+. +|+||||||+|||+++++.+||+|||+++.+......
T Consensus 112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~-- 186 (311)
T d1r0pa_ 112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-- 186 (311)
T ss_dssp TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC--
T ss_pred ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhccccccc--
Confidence 999986 34577889999999999999999999 9999999999999999999999999999987543322
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceeecccc------------ccccchhh-ccccCCCccHH
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK------------KQNKSILK-SAGIKGKKTVS 691 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~------------~~~~~i~~-~~~~~~~~~~~ 691 (746)
.........||+.|+|||++.+..++.+ +|||||||++|.... +....+.. ..+..+..+.+
T Consensus 187 --~~~~~~~~~gt~~y~aPE~~~~~~~~~k---sDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~ 261 (311)
T d1r0pa_ 187 --SVHNKTGAKLPVKWMALESLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 261 (311)
T ss_dssp --CTTCTTCSSCCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCH
T ss_pred --cceecccccccccccChHHHhcCCCCCh---hHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcH
Confidence 1122334679999999999998877655 999999999992111 00111111 12222244556
Q ss_pred HHHHhhCCCCCCCCC-CCCccchhhhcccCCC
Q 041467 692 FFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPS 722 (746)
Q Consensus 692 ~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~ 722 (746)
.+..++..|+...|+ ||++.++...++.+..
T Consensus 262 ~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~ 293 (311)
T d1r0pa_ 262 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 293 (311)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 777888888888888 9999988876665543
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-39 Score=337.53 Aligned_cols=227 Identities=22% Similarity=0.257 Sum_probs=175.9
Q ss_pred cCCCCCCeEeecCCeeEEE-----------EEeehhhhh-hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccch
Q 041467 480 NNFSPANKIREGGFNIVYN-----------VAMKVANLK-QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-----------vavK~~~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv 546 (746)
++|+..+.||+|+||+||+ ||||++... ..+..+.|.+|+++|+++ +|||||+++|+|.+.+..++|
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV 89 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 89 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence 5788889999999999996 678876533 334456799999999998 799999999999999999999
Q ss_pred hhhccCCccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcE
Q 041467 547 FKAISNGQLR---------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605 (746)
Q Consensus 547 ~e~~~~g~l~---------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 605 (746)
|||+++|+|. ...+++.++..++.|||.|++|+|+. +|+||||||+|||++.++.+
T Consensus 90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 166 (309)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCCce
Confidence 9999999985 14689999999999999999999999 99999999999999999999
Q ss_pred EEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccc
Q 041467 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKS 677 (746)
Q Consensus 606 ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~ 677 (746)
||+|||+|+..... .......||..|+|||.+.+..++.+ +|||||||++|.... .. ..+
T Consensus 167 kl~DfG~a~~~~~~---------~~~~~~~gt~~y~aPE~l~~~~~~~~---sDvwSfGvil~ell~~~~~p~~~~~~~~ 234 (309)
T d1fvra_ 167 KIADFGLSRGQEVY---------VKKTMGRLPVRWMAIESLNYSVYTTN---SDVWSYGVLLWEIVSLGGTPYCGMTCAE 234 (309)
T ss_dssp EECCTTCEESSCEE---------CCC----CCTTTCCHHHHHHCEECHH---HHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred EEcccccccccccc---------ccccceecCCcccchHHhccCCCCcc---ceeehhHHHHHHHHhcCCCCCCCCCHHH
Confidence 99999999865321 11223568999999999998877655 999999999992111 11 111
Q ss_pred h----hh-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 678 I----LK-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 678 i----~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
+ .. ..+.....+.+.+..++..|+...|+ ||++.++...++++.
T Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~ 284 (309)
T d1fvra_ 235 LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 284 (309)
T ss_dssp HHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1 11 12222345566777778888888888 999998876665544
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-39 Score=334.75 Aligned_cols=174 Identities=21% Similarity=0.239 Sum_probs=151.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|++.+.||+|+||+||+ ||||+++.... ....+.+|+++|+.++|||||++++++.+.+..|+||||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~ 82 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence 46799999999999999997 99999875432 335688999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC--CCcEEEccccccccccCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ--DVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~--~~~~ki~DfGla~~~~~~~~ 621 (746)
|++|+|. ...+++.++..++.||+.|++|||+. +|+||||||+|||++. ...+||+|||+++.....
T Consensus 83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~-- 157 (321)
T d1tkia_ 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-- 157 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhccccC--
Confidence 9999985 23689999999999999999999999 9999999999999984 458999999999875321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 158 -------~~~~~~~~t~~y~ape~~~~~~~~~~---~DiWSlGvily 194 (321)
T d1tkia_ 158 -------DNFRLLFTAPEYYAPEVHQHDVVSTA---TDMWSLGTLVY 194 (321)
T ss_dssp -------CEEEEEESCGGGSCHHHHTTCEECHH---HHHHHHHHHHH
T ss_pred -------CcccccccccccccchhccCCCCCch---hhcccHHHHHH
Confidence 22334678999999999998887655 99999999999
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-39 Score=334.27 Aligned_cols=235 Identities=19% Similarity=0.254 Sum_probs=185.3
Q ss_pred hhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC
Q 041467 477 KATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID 541 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~ 541 (746)
-..++|+..+.||+|+||.||+ ||||+++... .+....|.+|++++++++|||||+++|+|...+
T Consensus 17 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~ 96 (308)
T d1p4oa_ 17 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 96 (308)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred ecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCC
Confidence 3457888999999999999995 7999986432 344557899999999999999999999999999
Q ss_pred cccchhhhccCCccc---------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEE
Q 041467 542 FEGFDFKAISNGQLR---------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTH 606 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~---------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~k 606 (746)
..++||||+++|++. ...+++.++..++.|+|+||+|||+. +|+||||||+|||+|+++++|
T Consensus 97 ~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~K 173 (308)
T d1p4oa_ 97 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 173 (308)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEE
T ss_pred ceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEE
Confidence 999999999999985 13468999999999999999999999 999999999999999999999
Q ss_pred EccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccc--c------ccch
Q 041467 607 VGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKK--Q------NKSI 678 (746)
Q Consensus 607 i~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~--~------~~~i 678 (746)
|+|||+|+.+..... ........||+.|||||.+.+..++.+ +|||||||++|..... . ..++
T Consensus 174 l~DFGla~~~~~~~~------~~~~~~~~~t~~y~aPe~l~~~~~~~~---~Dv~S~G~il~El~t~~~~p~~~~~~~~~ 244 (308)
T d1p4oa_ 174 IGDFGMTRDIYETDY------YRKGGKGLLPVRWMSPESLKDGVFTTY---SDVWSFGVVLWEIATLAEQPYQGLSNEQV 244 (308)
T ss_dssp ECCTTCCCGGGGGGC------EEGGGSSEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHHTSCCTTTTSCHHHH
T ss_pred EeecccceeccCCcc------eeeccceecccccCCHHHHccCCCCcc---cccccHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999987643322 122334578999999999998877655 9999999998821110 0 1111
Q ss_pred h----h-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCCC
Q 041467 679 L----K-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPSR 723 (746)
Q Consensus 679 ~----~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~~ 723 (746)
+ + ..+.....+.+.+..++..|+...|. ||++.++...+++...+
T Consensus 245 ~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~ 295 (308)
T d1p4oa_ 245 LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 295 (308)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred HHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 1 1 11122245556777888888888888 99999887776665543
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.1e-38 Score=327.45 Aligned_cols=179 Identities=18% Similarity=0.291 Sum_probs=146.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC----c
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSID----F 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~----~ 542 (746)
.++|++.+.||+|+||.||+ ||||+++... ....+.+.+|+++++.++|||||++++++...+ .
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence 46799999999999999997 9999986432 344567999999999999999999999998754 3
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
.|+||||+++|++. ...+++.+++.++.||+.|++|||++ +|+||||||+|||++.++..+++|||.++...
T Consensus 86 ~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~ 162 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA 162 (277)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEECC
T ss_pred EEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhhhc
Confidence 78999999999886 45799999999999999999999999 99999999999999999999999999987653
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... ........+||+.|||||++.+..++.+ +||||+||++|
T Consensus 163 ~~~~-----~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~---~DiwSlGvily 205 (277)
T d1o6ya_ 163 DSGN-----SVTQTAAVIGTAQYLSPEQARGDSVDAR---SDVYSLGCVLY 205 (277)
T ss_dssp ---------------------TTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred cccc-----cccccccccCcccccCHHHHcCCCCCcc---eecccchHHHH
Confidence 3221 1223345789999999999988877654 99999999999
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-39 Score=330.93 Aligned_cols=174 Identities=19% Similarity=0.216 Sum_probs=147.5
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhh------hhhHHHHHHHHHhhcCC--CCceeeEEEEEecCCc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQK------EASRSFAAEFNALRNIR--HRNLIKIITICSSIDF 542 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~------~~~~~~~~E~~~l~~l~--HpnIv~l~~~~~~~~~ 542 (746)
++|++.+.||+|+||.||+ ||||++..... ...+++.+|+.++++++ |||||++++++.+.+.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 5799999999999999997 99999865421 12234779999999997 8999999999999999
Q ss_pred ccchhhhccCC-ccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-CCcEEEcccccccc
Q 041467 543 EGFDFKAISNG-QLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-DVVTHVGDLGLAKF 615 (746)
Q Consensus 543 ~~lv~e~~~~g-~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DfGla~~ 615 (746)
.++||||+.++ ++. ...+++.++..++.||+.||+|||++ +|+||||||+|||++. ++.+||+|||+|+.
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~ 160 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGAL 160 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECcccccee
Confidence 99999999764 442 56799999999999999999999999 9999999999999985 57999999999986
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ....+.+||+.|||||++.+..+.. +++||||+||++|
T Consensus 161 ~~~----------~~~~~~~GT~~y~aPE~~~~~~~~~--~~~DiwSlGvily 201 (273)
T d1xwsa_ 161 LKD----------TVYTDFDGTRVYSPPEWIRYHRYHG--RSAAVWSLGILLY 201 (273)
T ss_dssp CCS----------SCBCCCCSCGGGSCHHHHHHSCBCH--HHHHHHHHHHHHH
T ss_pred ccc----------ccccccccCCCcCCHHHHcCCCCCC--cccccccceeeeh
Confidence 532 1223478999999999998876642 3699999999999
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-38 Score=330.06 Aligned_cols=231 Identities=22% Similarity=0.248 Sum_probs=177.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE----------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEec
Q 041467 478 ATNNFSPANKIREGGFNIVYN----------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSS 539 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~----------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~ 539 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|+..+.++ +|||||+++++|.+
T Consensus 11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~ 90 (299)
T d1fgka_ 11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 90 (299)
T ss_dssp CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence 356889999999999999996 7999986543 34456789999999888 79999999999999
Q ss_pred CCcccchhhhccCCccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCee
Q 041467 540 IDFEGFDFKAISNGQLR---------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~---------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NIL 598 (746)
.+..++||||+++|++. ...+++.+++.++.|||.||+|||+. +||||||||+|||
T Consensus 91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiL 167 (299)
T d1fgka_ 91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 167 (299)
T ss_dssp SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeeccccee
Confidence 99999999999999985 13489999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc-c-cc--
Q 041467 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE-K-KQ-- 674 (746)
Q Consensus 599 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~-~-~~-- 674 (746)
++.++.+||+|||+++........ .......||+.|+|||++.+..|+.+ +|||||||++|... . ..
T Consensus 168 l~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~l~~~~y~~k---~DiwS~Gvvl~ell~~g~~p~ 238 (299)
T d1fgka_ 168 VTEDNVMKIADFGLARDIHHIDYY------KKTTNGRLPVKWMAPEALFDRIYTHQ---SDVWSFGVLLWEIFTLGGSPY 238 (299)
T ss_dssp ECTTCCEEECSTTCCCCGGGCCTT------CCCTTSCCGGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCSS
T ss_pred ecCCCCeEeccchhhccccccccc------cccccCCCChhhhhhhHhcCCCCCch---hhhHHhHHHHHHhccCCCCCC
Confidence 999999999999999887543321 22334678999999999998887655 99999999998221 1 10
Q ss_pred -------ccchhhc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 675 -------NKSILKS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 675 -------~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
....+.. .+.....+.+.+..++..|+...|. ||++.++...++++
T Consensus 239 ~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i 294 (299)
T d1fgka_ 239 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294 (299)
T ss_dssp TTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 1111111 1222234456677777777777777 88888877666543
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-38 Score=330.15 Aligned_cols=184 Identities=22% Similarity=0.251 Sum_probs=146.3
Q ss_pred cCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC----cccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID----FEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~----~~~lv~e 548 (746)
++|...+.||+|+||.||+ ||||++...... ....++|+..+.+++|||||+++++|.+.+ ..++|||
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~~~-~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~E 81 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEETTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchh-HHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEe
Confidence 4677888999999999996 999998644321 223445666777899999999999998754 4789999
Q ss_pred hccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 549 AISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHH-----CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 549 ~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~-----~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||++|+|. ...++|.++..++.|+|.|++|+|+. +.++||||||||+||||++++.+||+|||+++.....
T Consensus 82 y~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~ 161 (303)
T d1vjya_ 82 YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 161 (303)
T ss_dssp CCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred cccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCC
Confidence 99999996 45799999999999999999999974 2349999999999999999999999999999887543
Q ss_pred CCCCCcccccccccccccccccccccccccccc---cCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLE---NREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~---~~~~~~DiwSlG~i~~ 668 (746)
... ........+||+.|||||++.+.... .++.++|||||||++|
T Consensus 162 ~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~ 209 (303)
T d1vjya_ 162 TDT----IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 209 (303)
T ss_dssp TTE----ECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHH
T ss_pred Ccc----eeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHH
Confidence 321 11233457899999999998765321 1245699999999998
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-38 Score=332.57 Aligned_cols=231 Identities=19% Similarity=0.210 Sum_probs=181.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCC
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSSID 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~ 541 (746)
..++|+..+.||+|+||.||+ ||||+++... ......+.+|+.+++++ +|||||+++|+|.+.+
T Consensus 21 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~ 100 (311)
T d1t46a_ 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (311)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC
Confidence 346888999999999999996 7999986543 33456799999999999 6999999999999999
Q ss_pred cccchhhhccCCccc-----------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCee
Q 041467 542 FEGFDFKAISNGQLR-----------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NIL 598 (746)
..++|||||++|++. ...+++.++..++.|||+|++|||++ +||||||||+||+
T Consensus 101 ~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl 177 (311)
T d1t46a_ 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (311)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeeccccccccc
Confidence 999999999999874 12588999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-c----
Q 041467 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-K---- 673 (746)
Q Consensus 599 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~---- 673 (746)
++.++.+|++|||+++....... ........||+.|+|||++.+..++.+ +|||||||++|.... .
T Consensus 178 ~~~~~~~ki~DfG~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~---~DIwS~G~~l~ellt~g~p~~ 248 (311)
T d1t46a_ 178 LTHGRITKICDFGLARDIKNDSN------YVVKGNARLPVKWMAPESIFNCVYTFE---SDVWSYGIFLWELFSLGSSPY 248 (311)
T ss_dssp EETTTEEEECCCGGGSCTTSCTT------SEECSSSEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTTCCSS
T ss_pred ccccCcccccccchheeccCCCc------ceEeeecccChHHcCHHHhcCCCCCCc---ccccchHHHHHHHHhCCCCCC
Confidence 99999999999999987643322 122334789999999999998877655 999999999982210 1
Q ss_pred -------cccchhhc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 674 -------QNKSILKS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 674 -------~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
....+... .+.......+.+..++..|+...|+ ||++.++...+++.
T Consensus 249 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~ 305 (311)
T d1t46a_ 249 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (311)
T ss_dssp TTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence 01112211 1122233445666777777777777 89998887766553
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-38 Score=325.72 Aligned_cols=176 Identities=23% Similarity=0.354 Sum_probs=151.1
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
++|+..+.||+|+||+||+ ||||+++... ....+.+.+|++++++++|||||++++++.+.+..|+|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 6899999999999999997 9999986543 2345689999999999999999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+.++.+. ...+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+......
T Consensus 82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~-- 156 (298)
T d1gz8a_ 82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-- 156 (298)
T ss_dssp CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS--
T ss_pred ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccCCc--
Confidence 99876543 45689999999999999999999999 99999999999999999999999999998763221
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++....+. +.++||||+||++|
T Consensus 157 ------~~~~~~~gt~~y~apE~~~~~~~~--~~~~DiwSlGvily 194 (298)
T d1gz8a_ 157 ------RTYTHEVVTLWYRAPEILLGCKYY--STAVDIWSLGCIFA 194 (298)
T ss_dssp ------BCTTCCBCCCTTCCHHHHTTCSSC--CTHHHHHHHHHHHH
T ss_pred ------ccceeecccceeeehhhhccccCC--Cccccccccchhhh
Confidence 223346899999999998877653 34799999999999
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-38 Score=330.17 Aligned_cols=170 Identities=18% Similarity=0.231 Sum_probs=144.6
Q ss_pred hcCCCCCC-eEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhc-CCCCceeeEEEEEec----CCcc
Q 041467 479 TNNFSPAN-KIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRN-IRHRNLIKIITICSS----IDFE 543 (746)
Q Consensus 479 ~~~~~~~~-~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~-l~HpnIv~l~~~~~~----~~~~ 543 (746)
.++|++.. .||+|+||.||+ ||||+++. ...+.+|++++.+ .+|||||+++++|.+ ....
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~ 84 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 84 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence 46788764 699999999997 99999853 3457889998765 489999999999875 3568
Q ss_pred cchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEcccccc
Q 041467 544 GFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGDLGLA 613 (746)
Q Consensus 544 ~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DfGla 613 (746)
|+|||||++|+|. ...+++.+++.|+.||+.||+|||++ +|+||||||+|||+++ ++.+||+|||+|
T Consensus 85 ~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a 161 (335)
T d2ozaa1 85 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 161 (335)
T ss_dssp EEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCcccccccccccccccccccccccccccee
Confidence 9999999999985 23689999999999999999999999 9999999999999975 567999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+...... .....+||+.|||||++.+..|+.+ +||||+||++|
T Consensus 162 ~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~y~~~---~DiwSlGvily 204 (335)
T d2ozaa1 162 KETTSHN---------SLTTPCYTPYYVAPEVLGPEKYDKS---CDMWSLGVIMY 204 (335)
T ss_dssp EECCCCC---------CCCCCSCCCSSCCCCCCCGGGGSHH---HHHHHHHHHHH
T ss_pred eeccCCC---------ccccccCCcccCCcHHHcCCCCCHH---HHHHhhchhHH
Confidence 8764322 2234689999999999998887655 99999999999
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-37 Score=323.30 Aligned_cols=176 Identities=22% Similarity=0.354 Sum_probs=147.9
Q ss_pred hhcCCCCCCeEeecCCeeEEE----------EEeehhhhhh--hhhhHHHHHHHHHhhcC---CCCceeeEEEEEec---
Q 041467 478 ATNNFSPANKIREGGFNIVYN----------VAMKVANLKQ--KEASRSFAAEFNALRNI---RHRNLIKIITICSS--- 539 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~----------vavK~~~~~~--~~~~~~~~~E~~~l~~l---~HpnIv~l~~~~~~--- 539 (746)
..++|++.+.||+|+||+||+ ||||++.... ......+.+|+.+++.+ +|||||+++++|..
T Consensus 5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 457899999999999999997 8999986442 22234567888877666 79999999999864
Q ss_pred --CCcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 540 --IDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 540 --~~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
....+++||++.+|.+. ...+++..++.++.|++.||+|||++ +||||||||+|||++.++.+||+|||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~dfg 161 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 161 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecchh
Confidence 23678999999988664 45689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+++.... ........||+.|||||++.+..++.+ +||||+||++|
T Consensus 162 ~~~~~~~---------~~~~~~~~gT~~Y~APE~~~~~~y~~~---~DiwSlG~il~ 206 (305)
T d1blxa_ 162 LARIYSF---------QMALTSVVVTLWYRAPEVLLQSSYATP---VDLWSVGCIFA 206 (305)
T ss_dssp SCCCCCG---------GGGGCCCCCCCTTCCHHHHTTCCCCTH---HHHHHHHHHHH
T ss_pred hhhhhcc---------cccCCCcccChhhcCcchhcCCCCChh---ehhhchHHHHH
Confidence 9876421 223445789999999999998877654 99999999999
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=8e-37 Score=315.24 Aligned_cols=176 Identities=20% Similarity=0.314 Sum_probs=149.8
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
++|+..+.||+|+||+||+ ||||+++... ....+++.+|+.+|++++|||||+++++|.+.+..+++||+
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 6899999999999999997 9999986542 33467899999999999999999999999999999999999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
+.++.+. ...+++.++..++.||+.||+|||++ +||||||||+|||++.++.+|++|||.|.......
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~---- 154 (286)
T d1ob3a_ 82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---- 154 (286)
T ss_dssp CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred ehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceecccCc----
Confidence 9887654 56789999999999999999999999 99999999999999999999999999998763321
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......|++.|+|||++.+..+ ++.++||||+||++|
T Consensus 155 ----~~~~~~~~~~~y~~pE~~~~~~~--~~~~~DiwslGv~l~ 192 (286)
T d1ob3a_ 155 ----RKYTHEIVTLWYRAPDVLMGSKK--YSTTIDIWSVGCIFA 192 (286)
T ss_dssp -----------CCCTTCCHHHHTTCCS--CCTHHHHHHHHHHHH
T ss_pred ----cccceecccchhhhHHHHhCCCC--CCcceeehhcCcHHH
Confidence 12233578999999999987654 244699999999999
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-36 Score=314.59 Aligned_cols=181 Identities=19% Similarity=0.284 Sum_probs=148.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC-------
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI------- 540 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~------- 540 (746)
.++|+..+.||+|+||+||+ ||||++.... ....+++.+|+++|++++||||+++++++...
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 57899999999999999997 9999986543 33456789999999999999999999998663
Q ss_pred -CcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccc
Q 041467 541 -DFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614 (746)
Q Consensus 541 -~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~ 614 (746)
+..++||||+.++.+. ...+++.+++.++.|++.|++|||++ +|+||||||+|||++.++.+||+|||+|+
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~~~ 165 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 165 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecceee
Confidence 3578999999877764 45789999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
........ ......+.+||++|+|||++.+... ++.++||||+||++|
T Consensus 166 ~~~~~~~~----~~~~~~~~~gT~~Y~aPE~~~~~~~--~~~k~DiwSlGvil~ 213 (318)
T d3blha1 166 AFSLAKNS----QPNRYTNRVVTLWYRPPELLLGERD--YGPPIDLWGAGCIMA 213 (318)
T ss_dssp ECCC---------CCCCCSCCSCGGGCCHHHHTTCSS--CCTHHHHHHHHHHHH
T ss_pred eccccccc----ccccccceecCHHHhhHHHHcCCCC--CCcHHHcccCCceee
Confidence 76543321 1123344689999999999987643 244699999999999
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-36 Score=319.59 Aligned_cols=174 Identities=20% Similarity=0.242 Sum_probs=142.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID----- 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~----- 541 (746)
..++|+..+.||+|+||+||+ ||||++... .....+.+.+|+++|++++|||||+++++|...+
T Consensus 16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~ 95 (346)
T d1cm8a_ 16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 95 (346)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence 356899999999999999997 999998643 2344567899999999999999999999998765
Q ss_pred -cccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 542 -FEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 542 -~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
..++||||+ ++.+. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+|++|||+|+..
T Consensus 96 ~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~ 171 (346)
T d1cm8a_ 96 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA 171 (346)
T ss_dssp CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccceecc
Confidence 468999999 34443 56799999999999999999999999 9999999999999999999999999999875
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. ..+..+||+.|||||++.+..+. +.++||||+||++|
T Consensus 172 ~~-----------~~~~~~~t~~y~aPE~~~~~~~~--~~~~DiwSlGvil~ 210 (346)
T d1cm8a_ 172 DS-----------EMTGYVVTRWYRAPEVILNWMRY--TQTVDIWSVGCIMA 210 (346)
T ss_dssp CS-----------SCCSSCSCGGGCCTHHHHTTTCC--CTTHHHHHHHHHHH
T ss_pred CC-----------ccccccccccccCHHHHcCCCCC--CccchhhcchHHHH
Confidence 32 12346799999999999876442 34699999999998
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-36 Score=320.40 Aligned_cols=170 Identities=24% Similarity=0.313 Sum_probs=141.5
Q ss_pred CCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC------cccc
Q 041467 481 NFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID------FEGF 545 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------~~~l 545 (746)
+|+..++||+|+||+||+ ||||++.... +...+|+++|++++|||||+++++|.... +.++
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc----hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 688889999999999997 9999986432 22457999999999999999999986532 4689
Q ss_pred hhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC-cEEEccccccccc
Q 041467 546 DFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV-VTHVGDLGLAKFL 616 (746)
Q Consensus 546 v~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~-~~ki~DfGla~~~ 616 (746)
|||||++|... ...+++.+++.++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+|+..
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~ 173 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchhhc
Confidence 99999877532 44689999999999999999999999 999999999999999765 8999999999876
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ....+.+||+.|+|||++.+... ++.++||||+||++|
T Consensus 174 ~~~---------~~~~~~~gt~~y~aPE~~~~~~~--~~~~~DIwSlG~il~ 214 (350)
T d1q5ka_ 174 VRG---------EPNVSYICSRYYRAPELIFGATD--YTSSIDVWSAGCVLA 214 (350)
T ss_dssp CTT---------SCCCSCCSCTTSCCHHHHTTCSS--CCTHHHHHHHHHHHH
T ss_pred cCC---------cccccccccccccChHHhhcccC--CCcceeecccceEEE
Confidence 332 12234689999999999876532 244699999999999
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-35 Score=314.19 Aligned_cols=181 Identities=22% Similarity=0.266 Sum_probs=146.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc----c
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDF----E 543 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~----~ 543 (746)
..++|+..+.||+|+||+||+ ||||++.... ....+.+.+|+++|++++|||||++++++..... .
T Consensus 6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~ 85 (345)
T d1pmea_ 6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 85 (345)
T ss_dssp CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence 346799999999999999997 8999986433 3445678999999999999999999999977542 3
Q ss_pred cchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 544 GFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 544 ~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+++++++.+|+|. ...+++.+++.++.|++.||+|||++ +||||||||+|||++.++.+||+|||+|+.....
T Consensus 86 ~~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~ 162 (345)
T d1pmea_ 86 VYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 162 (345)
T ss_dssp EEEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EEEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceeeccCC
Confidence 4555667788876 45799999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. ........+||+.|+|||++..... +++++||||+||++|
T Consensus 163 ~~-----~~~~~~~~~gt~~y~aPE~l~~~~~--~~~~~DiwSlG~il~ 204 (345)
T d1pmea_ 163 HD-----HTGFLTEYVATRWYRAPEIMLNSKG--YTKSIDIWSVGCILA 204 (345)
T ss_dssp GC-----BCCTTCCCCSCGGGCCGGGTTTBCS--CSTHHHHHHHHHHHH
T ss_pred Cc-----cceeeccccccceechHHHhhcCCC--CCchhhhhccCceeh
Confidence 21 1122345789999999999866543 244699999999999
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.1e-35 Score=312.98 Aligned_cols=172 Identities=19% Similarity=0.302 Sum_probs=147.6
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecC--Ccccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSI--DFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~--~~~~lv~ 547 (746)
++|++.+.||+|+||+||+ ||||+++.. ..+++.+|+++|++++ ||||++++++|... ...++||
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~ 111 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 111 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence 5799999999999999997 999998632 3467899999999996 99999999999754 4688999
Q ss_pred hhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC-cEEEccccccccccCCCCCCC
Q 041467 548 KAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV-VTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 548 e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~-~~ki~DfGla~~~~~~~~~~~ 624 (746)
|||.+|++. ...+++.+++.++.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+......
T Consensus 112 e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~---- 184 (328)
T d3bqca1 112 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---- 184 (328)
T ss_dssp ECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC----
T ss_pred eecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccceeccCCC----
Confidence 999999987 56799999999999999999999999 999999999999998654 69999999998764321
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+||+.|+|||++.+... ++.++||||+||++|
T Consensus 185 -----~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~~l~ 221 (328)
T d3bqca1 185 -----EYNVRVASRYFKGPELLVDYQM--YDYSLDMWSLGCMLA 221 (328)
T ss_dssp -----CCCSCCSCGGGCCHHHHTTCCC--CCTHHHHHHHHHHHH
T ss_pred -----cccccccCccccCcccccCCCC--CCcccchhhhhhhhH
Confidence 2234679999999999887653 244699999999998
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-36 Score=314.39 Aligned_cols=179 Identities=22% Similarity=0.264 Sum_probs=152.3
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhhh----hhhhHHHHHHHHHhhcCCC-CceeeEEEEEecCC
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLKQ----KEASRSFAAEFNALRNIRH-RNLIKIITICSSID 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~----~~~~~~~~~E~~~l~~l~H-pnIv~l~~~~~~~~ 541 (746)
.++|+..+.||+|+||+||+ ||||+++... ....+.+.+|++++++++| |||+++++++.+..
T Consensus 23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~ 102 (322)
T d1vzoa_ 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 102 (322)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence 36799999999999999997 7999986432 2335568899999999977 89999999999999
Q ss_pred cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 542 FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
..+++|||+.+|++. ...+++..+..++.|++.|++|+|++ +||||||||+||+++.++.+||+|||+|+.+
T Consensus 103 ~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~ 179 (322)
T d1vzoa_ 103 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 179 (322)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred ceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccchhhh
Confidence 999999999999986 55788999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... ........||+.|+|||.+.+.... ++.++||||+||++|
T Consensus 180 ~~~~-------~~~~~~~~g~~~~~~pe~~~~~~~~-~~~ksDIWSlG~iLy 223 (322)
T d1vzoa_ 180 VADE-------TERAYDFCGTIEYMAPDIVRGGDSG-HDKAVDWWSLGVLMY 223 (322)
T ss_dssp CGGG-------GGGGCGGGSCCTTCCHHHHTTCC----CTHHHHHHHHHHHH
T ss_pred cccc-------cccccccccccccchhHHhhcCCcC-CCchhhhHHHHHHHH
Confidence 3321 1223457899999999999865432 244699999999999
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-35 Score=303.29 Aligned_cols=176 Identities=19% Similarity=0.271 Sum_probs=152.3
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
++|+..+.||+|+||+||+ ||||+++... ....+++.+|+.+++.++|||||+++++|.+....+++++
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 5799999999999999997 8999986442 3446789999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
++.++.+. ...+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||.|+.......
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~-- 156 (292)
T d1unla_ 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-- 156 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS--
T ss_pred eccccccccccccccccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccCCCc--
Confidence 99888765 56789999999999999999999999 999999999999999999999999999987643221
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+++.|+|||++....+. +.++||||+||++|
T Consensus 157 ------~~~~~~~~~~~~~pe~~~~~~~~--~~~~DiwSlG~il~ 193 (292)
T d1unla_ 157 ------CYSAEVVTLWYRPPDVLFGAKLY--STSIDMWSAGCIFA 193 (292)
T ss_dssp ------CCCSCCSCGGGCCHHHHTTCSCC--CTHHHHHHHHHHHH
T ss_pred ------cceeeccccchhhhhHhccCCCC--CchhhccccchHHH
Confidence 22235678899999999876542 34699999999998
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.1e-35 Score=306.55 Aligned_cols=180 Identities=20% Similarity=0.236 Sum_probs=144.9
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceee-EEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIK-IITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~-l~~~~~~~~~~~lv~e~ 549 (746)
++|++.+.||+|+||+||+ ||||++.... ..+++.+|+++++.++|+|+|. +.+++.+.+..++||||
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~ 84 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 84 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence 5699999999999999997 9999876432 2235789999999998776555 55555667788899999
Q ss_pred ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC---CCCcEEEccccccccccCCCC
Q 041467 550 ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~---~~~~~ki~DfGla~~~~~~~~ 621 (746)
+.++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++ .+..+|++|||+|+.+.....
T Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~ 161 (299)
T d1ckia_ 85 LGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 161 (299)
T ss_dssp CCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTT
T ss_pred cCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcceecccccc
Confidence 9655432 46799999999999999999999999 999999999999985 456799999999998755433
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... .........+||+.|||||++.+..++.+ +|||||||++|
T Consensus 162 ~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwSlG~~l~ 204 (299)
T d1ckia_ 162 HQH-IPYRENKNLTGTARYASINTHLGIEQSRR---DDLESLGYVLM 204 (299)
T ss_dssp CCB-CCCCBCCSCCCCSSSCCHHHHTTBCCCHH---HHHHHHHHHHH
T ss_pred ccc-eeccccCCcCCCccccCHHHHhCCCCCCh---hhEEecCHHHH
Confidence 221 11123345789999999999998877655 99999999998
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=6.5e-35 Score=301.26 Aligned_cols=179 Identities=16% Similarity=0.253 Sum_probs=149.4
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCC-CceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRH-RNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~H-pnIv~l~~~~~~~~~~~lv~e~ 549 (746)
++|++.+.||+|+||+||+ ||||++.... ....+.+|++.++.++| |||+.+++++......++||||
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~ 82 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 82 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence 5799999999999999997 8999875432 23357889999999975 8999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-----CCcEEEccccccccccC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-----DVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-----~~~~ki~DfGla~~~~~ 618 (746)
+ +|++. ...+++.++..++.|++.|++|||+. +|+||||||+|||++. ++.+||+|||+|+....
T Consensus 83 ~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~ 158 (293)
T d1csna_ 83 L-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 158 (293)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred c-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence 8 56654 45789999999999999999999999 9999999999999964 57899999999998754
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... .........+||+.|||||++.+..++.+ +||||+||++|
T Consensus 159 ~~~~~~-~~~~~~~~~~GT~~y~aPE~~~~~~~~~~---~DiwSlG~~l~ 204 (293)
T d1csna_ 159 PVTKQH-IPYREKKNLSGTARYMSINTHLGREQSRR---DDLEALGHVFM 204 (293)
T ss_dssp TTTCCB-CCCCCCCCCCSCTTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred Cccccc-eeecccCceEEchhhcCHHHhcCCCCChH---HHHHHhhHHHH
Confidence 433211 11123345789999999999998877655 99999999998
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.2e-35 Score=308.86 Aligned_cols=175 Identities=19% Similarity=0.232 Sum_probs=141.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC------C
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI------D 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~------~ 541 (746)
.++|++.+.||+|+||+||+ ||||++.... ....+++.+|+.++++++|||||+++++|... .
T Consensus 16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~ 95 (355)
T d2b1pa1 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 95 (355)
T ss_dssp ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence 46799999999999999997 8999986442 34456789999999999999999999999754 4
Q ss_pred cccchhhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 542 FEGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
..|+|||||.+|.+. ...+++.+++.++.||+.|++|||++ +|+||||||+|||++.++.+|++|||+++.....
T Consensus 96 ~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~ 172 (355)
T d2b1pa1 96 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172 (355)
T ss_dssp EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred eeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhccccc
Confidence 679999999877665 66789999999999999999999999 9999999999999999999999999998865321
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+..++.+ +||||+||++|
T Consensus 173 ---------~~~~~~~~t~~y~aPE~l~~~~~~~~---~DiwSlG~~l~ 209 (355)
T d2b1pa1 173 ---------FMMTPYVVTRYYRAPEVILGMGYKEN---VDIWSVGCIMG 209 (355)
T ss_dssp -----------------CCTTCCHHHHTTCCCCTT---HHHHHHHHHHH
T ss_pred ---------cccccccccccccChhhhcCCCCCCC---cccccccchHH
Confidence 22334679999999999998777554 99999999998
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-34 Score=306.14 Aligned_cols=175 Identities=19% Similarity=0.283 Sum_probs=145.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSID----- 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~----- 541 (746)
..++|+..+.||+|+||+||+ ||||++.... ....+++.+|++++++++|||||++++++....
T Consensus 16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~ 95 (348)
T d2gfsa1 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95 (348)
T ss_dssp EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence 356899999999999999997 9999986442 334567899999999999999999999986532
Q ss_pred cccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 542 FEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
..+++++++.+|+|. ...+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+|++|||+|....
T Consensus 96 ~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~ 172 (348)
T d2gfsa1 96 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 172 (348)
T ss_dssp CCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----CCT
T ss_pred ceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhcccC
Confidence 446778888899886 56799999999999999999999999 99999999999999999999999999997642
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+..||+.|+|||+..+..+. +.++||||+||++|
T Consensus 173 -----------~~~~~~~g~~~y~apE~~~~~~~~--~~~~DiwSlGv~l~ 210 (348)
T d2gfsa1 173 -----------DEMTGYVATRWYRAPEIMLNWMHY--NQTVDIWSVGCIMA 210 (348)
T ss_dssp -----------GGGSSSCHHHHTSCHHHHTTCSCC--CTTHHHHHHHHHHH
T ss_pred -----------cccccccccccccCchhhcCCccC--CcccchhhhhHHHH
Confidence 223347799999999998876543 33699999999999
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.97 E-value=9.3e-31 Score=273.45 Aligned_cols=248 Identities=23% Similarity=0.302 Sum_probs=148.6
Q ss_pred cccEEecccCcCcc--cCchhhhCCccCcEEeccc-CcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEE
Q 041467 19 FLRYINLVNNGFNG--EIPHQIGRLISLERLILSN-NSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERL 95 (746)
Q Consensus 19 ~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 95 (746)
+++.|||++|.++| .+|+++++|++|++|+|++ |+++|.+|.+|+++++|++|+|++|++.+..+..+.
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~-------- 122 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS-------- 122 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGG--------
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhcccccccccccccc--------
Confidence 57888888888876 4778888888888888875 777777888888888888888777777555444332
Q ss_pred EccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccc
Q 041467 96 RIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDF 175 (746)
Q Consensus 96 ~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 175 (746)
.+..|+.+++++|++.+.+|..|..+++|+.+++++|.+.+ .+
T Consensus 123 -------------------------------~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~------~i 165 (313)
T d1ogqa_ 123 -------------------------------QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG------AI 165 (313)
T ss_dssp -------------------------------GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEE------EC
T ss_pred -------------------------------chhhhcccccccccccccCchhhccCcccceeecccccccc------cc
Confidence 23444555555666666666666666666666666666654 34
Q ss_pred cccccCCCCC-CEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCC
Q 041467 176 INLLTNCSKL-ERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE 254 (746)
Q Consensus 176 ~~~~~~l~~L-~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 254 (746)
|..+..+.++ +.+++++|++++..|..+..+. ...+++++|.+.+.+|..+..+++|+.+++++|.+.+.+| .++.
T Consensus 166 p~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~--~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~ 242 (313)
T d1ogqa_ 166 PDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN--LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGL 242 (313)
T ss_dssp CGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC--CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCC
T ss_pred ccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccc-cccc
Confidence 4444444443 5566666666655555555542 3455555555555555555555555555555555554433 3455
Q ss_pred CCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEcc
Q 041467 255 TPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELD 334 (746)
Q Consensus 255 l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls 334 (746)
+++|+.|+|++|+++| .+|.+|+++++|++|+|++|+|+|.+|. ++++.++ ..++++
T Consensus 243 ~~~L~~L~Ls~N~l~g---------------------~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L-~~l~l~ 299 (313)
T d1ogqa_ 243 SKNLNGLDLRNNRIYG---------------------TLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRF-DVSAYA 299 (313)
T ss_dssp CTTCCEEECCSSCCEE---------------------CCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGS-CGGGTC
T ss_pred ccccccccCccCeecc---------------------cCChHHhCCCCCCEEECcCCcccccCCC-cccCCCC-CHHHhC
Confidence 5555555555555442 3444455555555555555555555553 3444554 345555
Q ss_pred Ccc
Q 041467 335 NNL 337 (746)
Q Consensus 335 ~N~ 337 (746)
+|+
T Consensus 300 ~N~ 302 (313)
T d1ogqa_ 300 NNK 302 (313)
T ss_dssp SSS
T ss_pred CCc
Confidence 554
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.97 E-value=7.5e-31 Score=274.16 Aligned_cols=256 Identities=26% Similarity=0.437 Sum_probs=218.7
Q ss_pred CCcEeeCccCcccc--cCCccccCCCCCCEEEccC-CCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhc
Q 041467 130 SLEMIEFSRNQFSG--GVSVDFSRLKNLSWLNLGV-NNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANL 206 (746)
Q Consensus 130 ~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 206 (746)
.++.|+|++|.++| .+|..+++|++|++|+|++ |.+++ .+|..|+++++|++|+|++|++.+..|..+..+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g------~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~ 124 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVG------PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI 124 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEES------CCCGGGGGCTTCSEEEEEEECCEEECCGGGGGC
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCcccccccccccccccc------ccccccccccccchhhhccccccccccccccch
Confidence 57788888888887 4678899999999999986 78876 577888899999999999999998888888888
Q ss_pred ccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCC-ceeecccccccccccccccccChHH--
Q 041467 207 SSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNL-QLLNIGGNHLQGSILSSLGNLTLQT-- 283 (746)
Q Consensus 207 ~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-~~L~Ls~N~l~~~~~~~l~~l~~l~-- 283 (746)
. .|+.+++++|++.+.+|.+|++++.|+.+++++|.+.+.+|..++.+..+ +.+++++|++++..|..+.++....
T Consensus 125 ~-~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~ 203 (313)
T d1ogqa_ 125 K-TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVD 203 (313)
T ss_dssp T-TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEE
T ss_pred h-hhcccccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 7 79999999999998899999999999999999999999999888888776 8899999999988888887765443
Q ss_pred hhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCC
Q 041467 284 YLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPEN 363 (746)
Q Consensus 284 ~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~ 363 (746)
...+...+.+|..+..+++|+.+++++|.+++.+| .+..+..+ +.|+|++|+++|.+|.+|+++
T Consensus 204 l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L-~~L~Ls~N~l~g~iP~~l~~L-------------- 267 (313)
T d1ogqa_ 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNL-NGLDLRNNRIYGTLPQGLTQL-------------- 267 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTC-CEEECCSSCCEECCCGGGGGC--------------
T ss_pred ccccccccccccccccccccccccccccccccccc-cccccccc-ccccCccCeecccCChHHhCC--------------
Confidence 33678888899999999999999999999997655 68888888 689999999999999988754
Q ss_pred CCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCCcCCCCCCCCCCcc
Q 041467 364 LSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSC 413 (746)
Q Consensus 364 l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~~~~~~~~~~ 413 (746)
++|+.|||++|+|+|.+|..+.+.++..+++.||+.+||. +++.|
T Consensus 268 -~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~----plp~c 312 (313)
T d1ogqa_ 268 -KFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS----PLPAC 312 (313)
T ss_dssp -TTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEEST----TSSCC
T ss_pred -CCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccccCC----CCCCC
Confidence 5568899999999999998777888888899999999996 34556
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=8.9e-30 Score=271.66 Aligned_cols=172 Identities=18% Similarity=0.243 Sum_probs=136.9
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-----------CCceeeEEEEEec
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-----------HRNLIKIITICSS 539 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------HpnIv~l~~~~~~ 539 (746)
++|++.+.||+|+||+||+ ||||+++... ...+.+.+|+++++.++ |||||++++++..
T Consensus 13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~ 91 (362)
T d1q8ya_ 13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 91 (362)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence 4599999999999999997 9999987443 23456788999888875 5789999998876
Q ss_pred CC--cccchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC------
Q 041467 540 ID--FEGFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV------ 603 (746)
Q Consensus 540 ~~--~~~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~------ 603 (746)
.+ ..+.+++++..+... ...+++..+..++.||+.|++|||+.. +|+||||||+|||++.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~--~IvHrDlKp~NIll~~~~~~~~~~ 169 (362)
T d1q8ya_ 92 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLI 169 (362)
T ss_dssp EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEE
T ss_pred ccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc--CcccccCChhHeeeeccCcccccc
Confidence 43 455566655444321 457889999999999999999999832 899999999999997654
Q ss_pred cEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 604 VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 604 ~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.+|++|||.|..... .....+||+.|+|||++.+..++. ++||||+||+++
T Consensus 170 ~~kl~dfg~s~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlG~il~ 220 (362)
T d1q8ya_ 170 QIKIADLGNACWYDE-----------HYTNSIQTREYRSPEVLLGAPWGC---GADIWSTACLIF 220 (362)
T ss_dssp EEEECCCTTCEETTB-----------CCCSCCSCGGGCCHHHHHTCCCCT---HHHHHHHHHHHH
T ss_pred eeeEeeccccccccc-----------ccccccccccccChhhccccCCCc---cccccchHHHHH
Confidence 499999999976422 123367999999999999887755 499999999987
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.94 E-value=6.4e-26 Score=243.30 Aligned_cols=297 Identities=23% Similarity=0.304 Sum_probs=183.4
Q ss_pred ccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEE
Q 041467 16 LRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERL 95 (746)
Q Consensus 16 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 95 (746)
.+.+|++|++++|.|+. + +.++.+++|++|||++|+|++ +| .|+++++|++|++++|.+.+.. .++++++|+.|
T Consensus 42 ~l~~l~~L~l~~~~I~~-l-~gl~~L~nL~~L~Ls~N~l~~-l~-~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~L 115 (384)
T d2omza2 42 DLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTD-IT-PLKNLTKLVDILMNNNQIADIT--PLANLTNLTGL 115 (384)
T ss_dssp HHTTCCEEECCSSCCCC-C-TTGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCEE
T ss_pred HhCCCCEEECCCCCCCC-c-cccccCCCCCEEeCcCCcCCC-Cc-cccCCccccccccccccccccc--ccccccccccc
Confidence 35789999999999974 4 468889999999999999986 44 3899999999999999986543 37889999999
Q ss_pred EccCCCCc--CcccCCCCCCEEeccCCCcc------------------------cccCCCCCcEeeCccCcccccCCccc
Q 041467 96 RIDCGGRI--DSLGHLKSLLLLSLAFNQFL------------------------SLSNASSLEMIEFSRNQFSGGVSVDF 149 (746)
Q Consensus 96 ~l~~~~~~--~~~~~l~~L~~L~Ls~N~l~------------------------~l~~l~~L~~L~Ls~N~l~~~~~~~~ 149 (746)
+++.+... ........+..+....|.+. .+...+.........|... ....+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 193 (384)
T d2omza2 116 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVS--DISVL 193 (384)
T ss_dssp ECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCC--CCGGG
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccc--ccccc
Confidence 98764432 23334445555555554441 1222333444444444433 23445
Q ss_pred cCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCcccc
Q 041467 150 SRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIR 229 (746)
Q Consensus 150 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~ 229 (746)
..+++++.+++++|.+++.. .+..+++|+.|++++|.++. +| .+..+. .|+.|++++|.+++.. .++
T Consensus 194 ~~l~~~~~l~l~~n~i~~~~--------~~~~~~~L~~L~l~~n~l~~-~~-~l~~l~-~L~~L~l~~n~l~~~~--~~~ 260 (384)
T d2omza2 194 AKLTNLESLIATNNQISDIT--------PLGILTNLDELSLNGNQLKD-IG-TLASLT-NLTDLDLANNQISNLA--PLS 260 (384)
T ss_dssp GGCTTCSEEECCSSCCCCCG--------GGGGCTTCCEEECCSSCCCC-CG-GGGGCT-TCSEEECCSSCCCCCG--GGT
T ss_pred ccccccceeeccCCccCCCC--------cccccCCCCEEECCCCCCCC-cc-hhhccc-ccchhccccCccCCCC--ccc
Confidence 56666667777666665421 13445666667776666653 22 455554 5666777766666432 256
Q ss_pred CCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccc-cccccccChHHhhhccCCCCCCccccCCCCCCeeee
Q 041467 230 NLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSI-LSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSV 308 (746)
Q Consensus 230 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~L 308 (746)
.+++|+.|++++|++.+.. .+..++.++.++++.|.+++.. ...+.+++.+++.+|++.+.. .+..+++|+.|++
T Consensus 261 ~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L 336 (384)
T d2omza2 261 GLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFF 336 (384)
T ss_dssp TCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEEC
T ss_pred ccccCCEeeccCcccCCCC--ccccccccccccccccccccccccchhcccCeEECCCCCCCCCc--ccccCCCCCEEEC
Confidence 6666677777666665432 2555666666666666665422 233344444444455555432 2556666666666
Q ss_pred cCCcCccccchhhhhcccccceEEccCccccc
Q 041467 309 SHNKLTSTLPQQILSVTTLSLYLELDNNLLNG 340 (746)
Q Consensus 309 s~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~ 340 (746)
++|+|+ .+| .+..+++| ++|++++|++++
T Consensus 337 ~~n~l~-~l~-~l~~l~~L-~~L~l~~N~l~~ 365 (384)
T d2omza2 337 ANNKVS-DVS-SLANLTNI-NWLSAGHNQISD 365 (384)
T ss_dssp CSSCCC-CCG-GGGGCTTC-CEEECCSSCCCB
T ss_pred CCCCCC-CCh-hHcCCCCC-CEEECCCCcCCC
Confidence 666665 243 46666666 466666666664
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.93 E-value=2e-24 Score=224.04 Aligned_cols=237 Identities=19% Similarity=0.254 Sum_probs=126.2
Q ss_pred cccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEcc
Q 041467 19 FLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID 98 (746)
Q Consensus 19 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 98 (746)
.++.+|=++++++ .+|..+. +++++|+|++|+|+...+.+|.++++|++|++++|.+....|..|.++++|++|+++
T Consensus 11 ~~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 4666777777776 5666553 567778888887775444567777778888887777766555555555555555554
Q ss_pred CCCCcCc-ccCCCCCCEEeccCCCccc-----ccCCCCCcEeeCccCccc--ccCCccccCCCCCCEEEccCCCCCCCCC
Q 041467 99 CGGRIDS-LGHLKSLLLLSLAFNQFLS-----LSNASSLEMIEFSRNQFS--GGVSVDFSRLKNLSWLNLGVNNLGSGTA 170 (746)
Q Consensus 99 ~~~~~~~-~~~l~~L~~L~Ls~N~l~~-----l~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 170 (746)
++..... ......|..|+++.|.+.. +.....+..++...|... ...+..|..+++|+++++++|.+...
T Consensus 88 ~n~l~~l~~~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l-- 165 (305)
T d1xkua_ 88 KNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI-- 165 (305)
T ss_dssp SSCCSBCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC--
T ss_pred CCccCcCccchhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcccc--
Confidence 4322100 0112344445555554432 223444444555444322 22233445555555555555555431
Q ss_pred CCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCc
Q 041467 171 NELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP 250 (746)
Q Consensus 171 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 250 (746)
+.. .+++|+.|++++|.+++..+..+..+. .++.|++++|.+++..+.+|.++++|++|+|++|+++ .+|.
T Consensus 166 -----~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~ 236 (305)
T d1xkua_ 166 -----PQG--LPPSLTELHLDGNKITKVDAASLKGLN-NLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG 236 (305)
T ss_dssp -----CSS--CCTTCSEEECTTSCCCEECTGGGTTCT-TCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCT
T ss_pred -----Ccc--cCCccCEEECCCCcCCCCChhHhhccc-cccccccccccccccccccccccccceeeeccccccc-cccc
Confidence 111 134555555555555555555555544 4555555555555544555555555555555555554 3344
Q ss_pred CCCCCCCCceeeccccccc
Q 041467 251 LIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 251 ~~~~l~~L~~L~Ls~N~l~ 269 (746)
.|.++++|++|+|++|+|+
T Consensus 237 ~l~~l~~L~~L~Ls~N~i~ 255 (305)
T d1xkua_ 237 GLADHKYIQVVYLHNNNIS 255 (305)
T ss_dssp TTTTCSSCCEEECCSSCCC
T ss_pred ccccccCCCEEECCCCccC
Confidence 5555555555555555554
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.93 E-value=1.9e-24 Score=231.61 Aligned_cols=296 Identities=25% Similarity=0.326 Sum_probs=197.8
Q ss_pred ccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCC
Q 041467 14 CILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLE 93 (746)
Q Consensus 14 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 93 (746)
+..+++|++|||++|+|++ +| .|+++++|++|+|++|.+++. + .++++++|+.|++++|.+.+..+. .....+.
T Consensus 62 l~~L~nL~~L~Ls~N~l~~-l~-~l~~L~~L~~L~L~~n~i~~i-~-~l~~l~~L~~L~~~~~~~~~~~~~--~~~~~~~ 135 (384)
T d2omza2 62 VEYLNNLTQINFSNNQLTD-IT-PLKNLTKLVDILMNNNQIADI-T-PLANLTNLTGLTLFNNQITDIDPL--KNLTNLN 135 (384)
T ss_dssp GGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGGG--TTCTTCS
T ss_pred cccCCCCCEEeCcCCcCCC-Cc-cccCCcccccccccccccccc-c-cccccccccccccccccccccccc--ccccccc
Confidence 3457999999999999985 44 399999999999999999864 3 389999999999999988654432 2334444
Q ss_pred EEEccCC-----------------------CCcCcccCCCCCCEEeccCCCc---ccccCCCCCcEeeCccCcccccCCc
Q 041467 94 RLRIDCG-----------------------GRIDSLGHLKSLLLLSLAFNQF---LSLSNASSLEMIEFSRNQFSGGVSV 147 (746)
Q Consensus 94 ~L~l~~~-----------------------~~~~~~~~l~~L~~L~Ls~N~l---~~l~~l~~L~~L~Ls~N~l~~~~~~ 147 (746)
.+....+ .....+...+.........|.. ..+..+++++.+++++|.+++..|
T Consensus 136 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n~i~~~~~- 214 (384)
T d2omza2 136 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP- 214 (384)
T ss_dssp EEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred ccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccceeeccCCccCCCCc-
Confidence 4433210 0112233344444455555544 234556677777777777765543
Q ss_pred cccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCcc
Q 041467 148 DFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHG 227 (746)
Q Consensus 148 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~ 227 (746)
+...++|+.|++++|.++. + ..+..+++|+.|++++|.+++..| +..++ +|+.|++++|++++.. .
T Consensus 215 -~~~~~~L~~L~l~~n~l~~-------~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~-~L~~L~l~~~~l~~~~--~ 280 (384)
T d2omza2 215 -LGILTNLDELSLNGNQLKD-------I-GTLASLTNLTDLDLANNQISNLAP--LSGLT-KLTELKLGANQISNIS--P 280 (384)
T ss_dssp -GGGCTTCCEEECCSSCCCC-------C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCT-TCSEEECCSSCCCCCG--G
T ss_pred -ccccCCCCEEECCCCCCCC-------c-chhhcccccchhccccCccCCCCc--ccccc-cCCEeeccCcccCCCC--c
Confidence 3455677777777776654 1 235566777777777777764322 45554 5777777777776432 2
Q ss_pred ccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccc-cccccccChHHhhhccCCCCCCccccCCCCCCee
Q 041467 228 IRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSI-LSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGL 306 (746)
Q Consensus 228 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L 306 (746)
+..+..++.++++.|++.+. ..+..+++++.|++++|++++.. ...+.+|+.|++.+|++++ +| .|+++++|++|
T Consensus 281 ~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L 356 (384)
T d2omza2 281 LAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWL 356 (384)
T ss_dssp GTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEE
T ss_pred cccccccccccccccccccc--cccchhcccCeEECCCCCCCCCcccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEE
Confidence 56666777777777776542 23566677777777777776643 2455556666666666664 44 58999999999
Q ss_pred eecCCcCccccchhhhhcccccceEEccCcc
Q 041467 307 SVSHNKLTSTLPQQILSVTTLSLYLELDNNL 337 (746)
Q Consensus 307 ~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~ 337 (746)
++++|+|++..| +.++++| +.|+|++|.
T Consensus 357 ~l~~N~l~~l~~--l~~l~~L-~~L~L~~Na 384 (384)
T d2omza2 357 SAGHNQISDLTP--LANLTRI-TQLGLNDQA 384 (384)
T ss_dssp ECCSSCCCBCGG--GTTCTTC-SEEECCCEE
T ss_pred ECCCCcCCCChh--hccCCCC-CEeeCCCCc
Confidence 999999996544 8888888 689999983
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.92 E-value=3.9e-24 Score=221.87 Aligned_cols=262 Identities=18% Similarity=0.240 Sum_probs=196.2
Q ss_pred cCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCc----CcccCCCCCCEEecc
Q 041467 43 SLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLA 118 (746)
Q Consensus 43 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls 118 (746)
.++++|=++++++ .+|..+. +++++|+|++|++....+..|.++++|++|+++++... ..|.++++|+.|+++
T Consensus 11 ~~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 5788999999998 6788775 68999999999997766668999999999999875432 468888888889988
Q ss_pred CCCccccc--CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEccccccc
Q 041467 119 FNQFLSLS--NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFE 196 (746)
Q Consensus 119 ~N~l~~l~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 196 (746)
+|++..++ ....+..|++++|.+.+..+..+.....+..++...|...... ..+..+..+++|+.+++++|.++
T Consensus 88 ~n~l~~l~~~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~----~~~~~~~~l~~L~~l~l~~n~l~ 163 (305)
T d1xkua_ 88 KNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG----IENGAFQGMKKLSYIRIADTNIT 163 (305)
T ss_dssp SSCCSBCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG----BCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCccCcCccchhhhhhhhhccccchhhhhhhhhhccccccccccccccccccC----CCccccccccccCccccccCCcc
Confidence 88887664 3457888888888888777777777888888888877654321 22345667788888888888876
Q ss_pred ccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccc
Q 041467 197 GVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSL 276 (746)
Q Consensus 197 ~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l 276 (746)
.+|..+ ..+|+.|++++|.+++..+..|.+++.++.|++++|.+.+..+..+.++++|++|+|++|+|+
T Consensus 164 -~l~~~~---~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~------- 232 (305)
T d1xkua_ 164 -TIPQGL---PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV------- 232 (305)
T ss_dssp -SCCSSC---CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-------
T ss_pred -ccCccc---CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-------
Confidence 455433 236888888888888777778888888888888888888777777788888888888888776
Q ss_pred cccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhh-------hcccccceEEccCcccc
Q 041467 277 GNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQIL-------SVTTLSLYLELDNNLLN 339 (746)
Q Consensus 277 ~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-------~l~~l~~~L~Ls~N~l~ 339 (746)
.+|.+|.++++|++|+|++|+|+ .++...+ ...++ ..|+|++|+++
T Consensus 233 ---------------~lp~~l~~l~~L~~L~Ls~N~i~-~i~~~~f~~~~~~~~~~~L-~~L~L~~N~~~ 285 (305)
T d1xkua_ 233 ---------------KVPGGLADHKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASY-SGVSLFSNPVQ 285 (305)
T ss_dssp ---------------SCCTTTTTCSSCCEEECCSSCCC-CCCTTSSSCSSCCTTSCCC-SEEECCSSSSC
T ss_pred ---------------ccccccccccCCCEEECCCCccC-ccChhhccCcchhcccCCC-CEEECCCCcCc
Confidence 45667777788888888888887 4443322 23444 45777777664
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=7.5e-25 Score=224.78 Aligned_cols=268 Identities=20% Similarity=0.219 Sum_probs=192.5
Q ss_pred cEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCC
Q 041467 21 RYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCG 100 (746)
Q Consensus 21 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~ 100 (746)
..++.++++++ .+|..+. +++++|+|++|+|+...+.+|.++++|++|++++|++....+..+..+..++.+.....
T Consensus 14 ~~v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~ 90 (284)
T d1ozna_ 14 VTTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (284)
T ss_dssp CEEECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccc
Confidence 35678888887 6777664 57899999999998666677999999999999999987777777777777777665432
Q ss_pred CCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccccccc
Q 041467 101 GRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLT 180 (746)
Q Consensus 101 ~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 180 (746)
.....+. -..|.++++|++|++++|.+....+..+...++|+.+++++|.|++.+ +..|.
T Consensus 91 ~~~~~l~--------------~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~------~~~f~ 150 (284)
T d1ozna_ 91 AQLRSVD--------------PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALP------DDTFR 150 (284)
T ss_dssp TTCCCCC--------------TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC------TTTTT
T ss_pred ccccccc--------------chhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccC------hhHhc
Confidence 2111110 023556777778888888887777777888888888888888887633 34567
Q ss_pred CCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCce
Q 041467 181 NCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQL 260 (746)
Q Consensus 181 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 260 (746)
.+++|+.|++++|++++..|..|..+. +|+.+++++|++++..|.+|.++++|++|++++|++.+..|..|+.+++|++
T Consensus 151 ~~~~L~~L~l~~N~l~~l~~~~f~~l~-~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~ 229 (284)
T d1ozna_ 151 DLGNLTHLFLHGNRISSVPERAFRGLH-SLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQY 229 (284)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCE
T ss_pred cccchhhcccccCcccccchhhhcccc-ccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCE
Confidence 778888888888888877777777776 7888888888888888888888889999999999988877788888889999
Q ss_pred eeccccccccccccc-c-cccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCcc
Q 041467 261 LNIGGNHLQGSILSS-L-GNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTS 315 (746)
Q Consensus 261 L~Ls~N~l~~~~~~~-l-~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 315 (746)
|+|++|.+...-... + ..++......+++....|..+.+ ....+++.+.|+|
T Consensus 230 L~l~~N~l~C~C~~~~l~~~l~~~~~~~~~~~C~~p~~l~g---~~l~~l~~~~l~g 283 (284)
T d1ozna_ 230 LRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLAG---RDLKRLAANDLQG 283 (284)
T ss_dssp EECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGGTT---CBGGGSCGGGSCC
T ss_pred EEecCCCCCCCccchHHHHHHHhCcCCCCceEeCCchHHcC---CccccCCHHHCCC
Confidence 999999887532110 0 00111111234555556665543 4555666666654
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.6e-23 Score=214.72 Aligned_cols=256 Identities=19% Similarity=0.165 Sum_probs=191.8
Q ss_pred CcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCC-CCCCccc
Q 041467 5 NLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSN-NLVRDIL 83 (746)
Q Consensus 5 ~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~~ 83 (746)
.+.++|... .+.+++|+|++|+|+...+.+|.++++|++|++++|++....+..+.++..++.++...+ .+....+
T Consensus 22 ~L~~iP~~i---p~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~ 98 (284)
T d1ozna_ 22 GLQAVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 98 (284)
T ss_dssp CCSSCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCT
T ss_pred CCCccCCCC---CCCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccc
Confidence 455555432 256899999999999767778999999999999999999888888999999999987644 4444444
Q ss_pred hhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCCCCEE
Q 041467 84 TEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWL 158 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 158 (746)
..+.++ ++|++|++++|.+. .+...++|+.+++++|+|+++.+..|..+++|+.|
T Consensus 99 ~~~~~l--------------------~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L 158 (284)
T d1ozna_ 99 ATFHGL--------------------GRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158 (284)
T ss_dssp TTTTTC--------------------TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred hhhccc--------------------ccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhc
Confidence 445544 45555555555542 24456788888888888888778888888889999
Q ss_pred EccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeee
Q 041467 159 NLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLT 238 (746)
Q Consensus 159 ~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~ 238 (746)
++++|+++.. .+..|.++++|+.+++++|++++..|..|..++ +|++|++++|++.+..|.+|+++.+|++|+
T Consensus 159 ~l~~N~l~~l------~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~-~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~ 231 (284)
T d1ozna_ 159 FLHGNRISSV------PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG-RLMTLYLFANNLSALPTEALAPLRALQYLR 231 (284)
T ss_dssp ECCSSCCCEE------CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCSCCCHHHHTTCTTCCEEE
T ss_pred ccccCccccc------chhhhccccccchhhhhhccccccChhHhhhhh-hcccccccccccccccccccccccccCEEE
Confidence 9999988762 345677888999999999998888888888887 789999999999887778888899999999
Q ss_pred cccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCC
Q 041467 239 MESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQG 291 (746)
Q Consensus 239 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~ 291 (746)
|++|.+...-+. -.-...++.+....+++....|..+.+....++..+++.|
T Consensus 232 l~~N~l~C~C~~-~~l~~~l~~~~~~~~~~~C~~p~~l~g~~l~~l~~~~l~g 283 (284)
T d1ozna_ 232 LNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQG 283 (284)
T ss_dssp CCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESGGGTTCBGGGSCGGGSCC
T ss_pred ecCCCCCCCccc-hHHHHHHHhCcCCCCceEeCCchHHcCCccccCCHHHCCC
Confidence 999888743221 1111245666777777877778887776665555555544
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.1e-22 Score=206.29 Aligned_cols=202 Identities=20% Similarity=0.237 Sum_probs=158.8
Q ss_pred cccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 15 ILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
...+.+...|.++++|+ .+|+.+. ++|++|||++|+|++..+..|.++++|++|+|++|++.. ++.
T Consensus 7 ~~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~~---------- 72 (266)
T d1p9ag_ 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQV---------- 72 (266)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EEC----------
T ss_pred cccCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-ccc----------
Confidence 34567777899999998 6787664 578999999999987666788999999999999987742 221
Q ss_pred EEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 95 LRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 95 L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
+..+++|+.|+|++|++++ .+..+..+++|++|++++|.+....
T Consensus 73 ------------------------------~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~----- 116 (266)
T d1p9ag_ 73 ------------------------------DGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLP----- 116 (266)
T ss_dssp ------------------------------CSCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCC-----
T ss_pred ------------------------------ccccccccccccccccccc-cccccccccccccccccccccceee-----
Confidence 1234556666666777764 3556778888888888888887632
Q ss_pred ccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCC
Q 041467 175 FINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE 254 (746)
Q Consensus 175 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 254 (746)
+..+..+.+++.|++++|.+++..+..+..+. .++.+++++|+|++..++.|..+++|++|+|++|+++ .+|+.+..
T Consensus 117 -~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~-~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~ 193 (266)
T d1p9ag_ 117 -LGALRGLGELQELYLKGNELKTLPPGLLTPTP-KLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFG 193 (266)
T ss_dssp -SSTTTTCTTCCEEECTTSCCCCCCTTTTTTCT-TCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTT
T ss_pred -ccccccccccccccccccccceeccccccccc-cchhcccccccccccCccccccccccceeecccCCCc-ccChhHCC
Confidence 34466778888899988888866666666666 7999999999999888888999999999999999998 78888889
Q ss_pred CCCCceeeccccccc
Q 041467 255 TPNLQLLNIGGNHLQ 269 (746)
Q Consensus 255 l~~L~~L~Ls~N~l~ 269 (746)
+++|+.|+|++|.+.
T Consensus 194 ~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 194 SHLLPFAFLHGNPWL 208 (266)
T ss_dssp TCCCSEEECCSCCBC
T ss_pred CCCCCEEEecCCCCC
Confidence 999999999999876
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=3.7e-22 Score=202.26 Aligned_cols=202 Identities=21% Similarity=0.232 Sum_probs=169.6
Q ss_pred ccCCCCCCEEeccCCCccccc-CC-CCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCC
Q 041467 106 LGHLKSLLLLSLAFNQFLSLS-NA-SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCS 183 (746)
Q Consensus 106 ~~~l~~L~~L~Ls~N~l~~l~-~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~ 183 (746)
..+...+.+.+.+++.+++++ ++ ++|++|+|++|+|++..+..|.++++|++|+|++|+|+. ++ .++.++
T Consensus 6 ~~~~~~~~~v~C~~~~L~~iP~~lp~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-------l~-~~~~l~ 77 (266)
T d1p9ag_ 6 VSKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-------LQ-VDGTLP 77 (266)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-------EE-CCSCCT
T ss_pred EcccCCCeEEEccCCCCCeeCcCcCcCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-------cc-cccccc
Confidence 345566777788888888775 45 479999999999998888889999999999999999874 22 356789
Q ss_pred CCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeec
Q 041467 184 KLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNI 263 (746)
Q Consensus 184 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 263 (746)
+|++|+|++|+++ ..|..+..++ .|+.|++++|.+.+..+..+..+.++++|++++|.+.+..+..+..+++|+.|++
T Consensus 78 ~L~~L~Ls~N~l~-~~~~~~~~l~-~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l 155 (266)
T d1p9ag_ 78 VLGTLDLSHNQLQ-SLPLLGQTLP-ALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155 (266)
T ss_dssp TCCEEECCSSCCS-SCCCCTTTCT-TCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccccccccccccc-cccccccccc-ccccccccccccceeeccccccccccccccccccccceeccccccccccchhccc
Confidence 9999999999997 4566777887 7999999999998877888889999999999999998777788888999999999
Q ss_pred ccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccc
Q 041467 264 GGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNG 340 (746)
Q Consensus 264 s~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~ 340 (746)
++|++++ ..+..|..+++|++|+|++|+|+ .+|+.++.+..+ +.|+|++|++..
T Consensus 156 ~~N~l~~---------------------~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L-~~L~L~~Np~~C 209 (266)
T d1p9ag_ 156 ANNNLTE---------------------LPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLL-PFAFLHGNPWLC 209 (266)
T ss_dssp TTSCCSC---------------------CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCC-SEEECCSCCBCC
T ss_pred ccccccc---------------------cCccccccccccceeecccCCCc-ccChhHCCCCCC-CEEEecCCCCCC
Confidence 9988873 34556788899999999999998 899999999988 689999998864
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.84 E-value=7.8e-22 Score=189.10 Aligned_cols=124 Identities=20% Similarity=0.235 Sum_probs=99.9
Q ss_pred CCCCeEeecCCeeEEE--------EEeehhhhhh------------------hhhhHHHHHHHHHhhcCCCCceeeEEEE
Q 041467 483 SPANKIREGGFNIVYN--------VAMKVANLKQ------------------KEASRSFAAEFNALRNIRHRNLIKIITI 536 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~--------vavK~~~~~~------------------~~~~~~~~~E~~~l~~l~HpnIv~l~~~ 536 (746)
.+.+.||+|+||.||+ ||||+++... ........+|++.+.++.|++++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 4578999999999997 9999764211 1112345679999999999999998875
Q ss_pred EecCCcccchhhhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 537 CSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 537 ~~~~~~~~lv~e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
. ..+++|||++++... .++......++.|+++|++|||++ +|+||||||+|||++++ .++++|||.|+..
T Consensus 83 ~----~~~lvme~~~~~~~~--~l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~~liDFG~a~~~ 152 (191)
T d1zara2 83 E----GNAVLMELIDAKELY--RVRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GIWIIDFPQSVEV 152 (191)
T ss_dssp E----TTEEEEECCCCEEGG--GCCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EEEECCCTTCEET
T ss_pred c----CCEEEEEeecccccc--chhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CEEEEECCCcccC
Confidence 3 247899999876553 356677788999999999999999 99999999999999865 5899999999764
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.81 E-value=6.6e-18 Score=177.59 Aligned_cols=301 Identities=26% Similarity=0.279 Sum_probs=180.2
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
.++++|||++|+++ .+|+. +++|++|+|++|+|+ .+|+.+ .+|+.|++++|.+.. ++. + .+.|++|++
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~~-l~~-l--p~~L~~L~L 105 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLKA-LSD-L--PPLLEYLGV 105 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCSC-CCS-C--CTTCCEEEC
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccch-hhh-h--ccccccccc
Confidence 46899999999997 68864 568999999999998 678764 578999999998743 222 1 135777777
Q ss_pred cCCCCc--CcccCCCCCCEEeccCCCccccc-CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 98 DCGGRI--DSLGHLKSLLLLSLAFNQFLSLS-NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 98 ~~~~~~--~~~~~l~~L~~L~Ls~N~l~~l~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
+++... +.++.+++|+.|++++|.+.... ....+..+.+..+... ....+..++.++.|++++|.+.....
T Consensus 106 ~~n~l~~lp~~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~~~~---- 179 (353)
T d1jl5a_ 106 SNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKKLPD---- 179 (353)
T ss_dssp CSSCCSSCCCCTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSSCCC----
T ss_pred cccccccccchhhhccceeeccccccccccccccccccchhhcccccc--ccccccccccceeccccccccccccc----
Confidence 765432 34566677777777777665443 3445666666655543 23445666677777777766643211
Q ss_pred ccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCC
Q 041467 175 FINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE 254 (746)
Q Consensus 175 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 254 (746)
.....+.+..+.+.+. .+|. +..+. .|+.+++++|.... +|.. ..++..+.+.+|.+.. .+. .
T Consensus 180 ------~~~~~~~l~~~~~~~~-~~~~-~~~l~-~L~~l~l~~n~~~~-~~~~---~~~l~~~~~~~~~~~~-~~~---~ 242 (353)
T d1jl5a_ 180 ------LPLSLESIVAGNNILE-ELPE-LQNLP-FLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPE---L 242 (353)
T ss_dssp ------CCTTCCEEECCSSCCS-SCCC-CTTCT-TCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCC---C
T ss_pred ------cccccccccccccccc-cccc-ccccc-cccccccccccccc-cccc---cccccccccccccccc-ccc---c
Confidence 1123344555544443 3332 33444 46666666666542 3322 3445566666665542 222 2
Q ss_pred CCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEcc
Q 041467 255 TPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELD 334 (746)
Q Consensus 255 l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls 334 (746)
..++...++..|.+.+. ..+.......+.....++.....+++|++|+|++|+|+ .+|.. +.+| +.|+|+
T Consensus 243 ~~~l~~~~~~~~~~~~l-----~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~---~~~L-~~L~L~ 312 (353)
T d1jl5a_ 243 PQSLTFLDVSENIFSGL-----SELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPAL---PPRL-ERLIAS 312 (353)
T ss_dssp CTTCCEEECCSSCCSEE-----SCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCS-CCCCC---CTTC-CEEECC
T ss_pred ccccccccccccccccc-----ccccchhcccccccCccccccccCCCCCEEECCCCccC-ccccc---cCCC-CEEECC
Confidence 33455555555554421 11111000111112233333445678999999999998 68864 4556 578999
Q ss_pred CccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCCC
Q 041467 335 NNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPT 383 (746)
Q Consensus 335 ~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p~ 383 (746)
+|+|+ .+|.. +.+|+.|++++|+++. +|.
T Consensus 313 ~N~L~-~l~~~------------------~~~L~~L~L~~N~L~~-lp~ 341 (353)
T d1jl5a_ 313 FNHLA-EVPEL------------------PQNLKQLHVEYNPLRE-FPD 341 (353)
T ss_dssp SSCCS-CCCCC------------------CTTCCEEECCSSCCSS-CCC
T ss_pred CCcCC-ccccc------------------cCCCCEEECcCCcCCC-CCc
Confidence 99987 45531 3467889999999874 553
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.78 E-value=1.1e-17 Score=176.02 Aligned_cols=283 Identities=22% Similarity=0.244 Sum_probs=181.9
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
.++|++|+|++|+|+ .+|+.+ .+|++|++++|+++ .++.. .+.|++|++++|.+. .+|. ++.+++|+.|+
T Consensus 57 ~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~ 126 (353)
T d1jl5a_ 57 PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGVSNNQLE-KLPE-LQNSSFLKIID 126 (353)
T ss_dssp CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEE
T ss_pred CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---ccccccccccccccc-cccc-hhhhccceeec
Confidence 478999999999998 788754 57999999999998 45532 246999999999985 4554 68899999999
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCc
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANEL 173 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 173 (746)
++++...........+..+.+..+... .+..++.++.|++++|.+..... .....+.+..+.+.+..
T Consensus 127 l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~~~----~~~~~~~l~~~~~~~~~------ 196 (353)
T d1jl5a_ 127 VDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPD----LPLSLESIVAGNNILEE------ 196 (353)
T ss_dssp CCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSS------
T ss_pred cccccccccccccccccchhhccccccccccccccccceeccccccccccccc----ccccccccccccccccc------
Confidence 988766555555667778887777663 45677888899999888764322 22345566666665543
Q ss_pred cccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCC
Q 041467 174 DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIG 253 (746)
Q Consensus 174 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 253 (746)
+ ..+..++.|+.+++++|... .+|... ..+..+.+.+|.+.. .+.. ..++...++..+.+.+.. ..
T Consensus 197 -~-~~~~~l~~L~~l~l~~n~~~-~~~~~~----~~l~~~~~~~~~~~~-~~~~---~~~l~~~~~~~~~~~~l~-~l-- 262 (353)
T d1jl5a_ 197 -L-PELQNLPFLTTIYADNNLLK-TLPDLP----PSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLS-EL-- 262 (353)
T ss_dssp -C-CCCTTCTTCCEEECCSSCCS-SCCSCC----TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEES-CC--
T ss_pred -c-cccccccccccccccccccc-cccccc----ccccccccccccccc-cccc---cccccccccccccccccc-cc--
Confidence 1 22456778888888888765 344322 246677777777763 2322 234444555444443211 10
Q ss_pred CCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEc
Q 041467 254 ETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLEL 333 (746)
Q Consensus 254 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~L 333 (746)
.......++..|.+.+ ++..+.+|+.|++.+|++. .+|.. +++|+.|+|++|+|+ .+|.. +.+| +.|++
T Consensus 263 -~~~~~~~~~~~~~~~~-~~~~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L-~~L~L 331 (353)
T d1jl5a_ 263 -PPNLYYLNASSNEIRS-LCDLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNL-KQLHV 331 (353)
T ss_dssp -CTTCCEEECCSSCCSE-ECCCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTC-CEEEC
T ss_pred -cchhcccccccCcccc-ccccCCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCC-ccccc---cCCC-CEEEC
Confidence 1123333444444432 1222334444444444444 45543 567889999999998 67764 3456 57999
Q ss_pred cCccccccCchh
Q 041467 334 DNNLLNGSLPPE 345 (746)
Q Consensus 334 s~N~l~~~~p~~ 345 (746)
++|+++ .+|..
T Consensus 332 ~~N~L~-~lp~~ 342 (353)
T d1jl5a_ 332 EYNPLR-EFPDI 342 (353)
T ss_dssp CSSCCS-SCCCC
T ss_pred cCCcCC-CCCcc
Confidence 999987 66653
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=2.2e-18 Score=171.53 Aligned_cols=203 Identities=16% Similarity=0.147 Sum_probs=117.2
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccch-hhcCCCCCCEEEcc
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILT-EICSLFKLERLRID 98 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~l~ 98 (746)
.+.++.+++.++ .+|+.+. +++++|||++|+|+...+..|.++++|++|++++|.+...++. .|.++++++++.+.
T Consensus 10 ~~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~ 86 (242)
T d1xwdc1 10 NRVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 86 (242)
T ss_dssp SSEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEE
T ss_pred CCEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccc
Confidence 468888998887 7777653 5899999999999865556789999999999999988665433 23333333333221
Q ss_pred CCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccccc
Q 041467 99 CGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINL 178 (746)
Q Consensus 99 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 178 (746)
..|++....+..|.++++|++|++++|.+..... ...
T Consensus 87 --------------------------------------~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~-----~~~ 123 (242)
T d1xwdc1 87 --------------------------------------KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD-----VHK 123 (242)
T ss_dssp --------------------------------------CCTTCCEECTTSEECCTTCCEEEEESCCCCSCCC-----CTT
T ss_pred --------------------------------------ccccccccccccccccccccccccchhhhccccc-----ccc
Confidence 1234444445555556666666666655543211 112
Q ss_pred ccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCee-ecccccceecCCcCCCCCCC
Q 041467 179 LTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWL-TMESSQLIGTIPPLIGETPN 257 (746)
Q Consensus 179 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L-~L~~N~l~~~~p~~~~~l~~ 257 (746)
+..+..+..+..+++.+....+..+..++..++.|++++|+++...+..| +..++.++ ++++|+++...+..|.++++
T Consensus 124 ~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~-~~~~l~~~~~l~~n~l~~l~~~~f~~l~~ 202 (242)
T d1xwdc1 124 IHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAF-NGTQLDELNLSDNNNLEELPNDVFHGASG 202 (242)
T ss_dssp TCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTT-TTCCEEEEECTTCTTCCCCCTTTTTTSCC
T ss_pred cccccccccccccccccccccccccccccccceeeecccccccccccccc-cchhhhccccccccccccccHHHhcCCCC
Confidence 23334444445555555544444444444456666666666664333333 33333333 45555565443445666666
Q ss_pred Cceeeccccccc
Q 041467 258 LQLLNIGGNHLQ 269 (746)
Q Consensus 258 L~~L~Ls~N~l~ 269 (746)
|++|+|++|+|+
T Consensus 203 L~~L~Ls~N~l~ 214 (242)
T d1xwdc1 203 PVILDISRTRIH 214 (242)
T ss_dssp CSEEECTTSCCC
T ss_pred CCEEECCCCcCC
Confidence 666666666665
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=3.1e-18 Score=168.58 Aligned_cols=205 Identities=20% Similarity=0.291 Sum_probs=128.8
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
+.+..++++.+.+++.. .+..+.+|++|++++|.|+. ++ .+..+++|++|++++|.+.+..| +.++++|+.+++
T Consensus 19 ~~~~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~ 92 (227)
T d1h6ua2 19 ANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELEL 92 (227)
T ss_dssp HHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEEC
T ss_pred HHHHHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc--cccccccccccc
Confidence 44556678888887543 45667888888888888884 44 57888888888888888755432 555555555555
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCc---ccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQF---LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l---~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
+. |.+ ..+..+++|+.+++++|...+. ..+...+.++.+.++.+.+..
T Consensus 93 ~~--------------------n~~~~i~~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~------- 143 (227)
T d1h6ua2 93 SG--------------------NPLKNVSAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITN------- 143 (227)
T ss_dssp CS--------------------CCCSCCGGGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCC-------
T ss_pred cc--------------------cccccccccccccccccccccccccccc--chhccccchhhhhchhhhhch-------
Confidence 43 333 2334555666666666655532 224555666666666666543
Q ss_pred ccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCC
Q 041467 175 FINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE 254 (746)
Q Consensus 175 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 254 (746)
...+.++++|+.|++++|.+++. ..+.+++ +|+.|++++|++++ ++ .++++++|++|+|++|++++. |+ +.+
T Consensus 144 -~~~~~~~~~L~~L~l~~n~~~~~--~~l~~l~-~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~i-~~-l~~ 215 (227)
T d1h6ua2 144 -ISPLAGLTNLQYLSIGNAQVSDL--TPLANLS-KLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISDV-SP-LAN 215 (227)
T ss_dssp -CGGGGGCTTCCEEECCSSCCCCC--GGGTTCT-TCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCBC-GG-GTT
T ss_pred -hhhhccccccccccccccccccc--hhhcccc-cceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCCC-cc-ccc
Confidence 11245566677777777766532 2355665 57777777777764 33 366777777777777777643 32 667
Q ss_pred CCCCceeeccc
Q 041467 255 TPNLQLLNIGG 265 (746)
Q Consensus 255 l~~L~~L~Ls~ 265 (746)
+++|+.|++++
T Consensus 216 l~~L~~L~lsn 226 (227)
T d1h6ua2 216 TSNLFIVTLTN 226 (227)
T ss_dssp CTTCCEEEEEE
T ss_pred CCCCCEEEeeC
Confidence 77777777763
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.73 E-value=3.7e-17 Score=160.77 Aligned_cols=186 Identities=23% Similarity=0.318 Sum_probs=139.2
Q ss_pred cccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 15 ILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
..+++|++|++++|+|+ .++ .+..+++|++|+|++|++++..| +..+++|+.|++++|.+.. ++ .+..+++
T Consensus 38 ~~l~~L~~L~l~~~~i~-~l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~-i~-~l~~l~~--- 108 (227)
T d1h6ua2 38 ADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQS--- 108 (227)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTT---
T ss_pred HHcCCcCEEECCCCCCC-cch-hHhcCCCCcEeecCCceeecccc--ccccccccccccccccccc-cc-ccccccc---
Confidence 34688999999999998 454 59999999999999999986443 8999999999999998743 22 3444444
Q ss_pred EEccCCCCcCcccCCCCCCEEeccCCCcc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCC
Q 041467 95 LRIDCGGRIDSLGHLKSLLLLSLAFNQFL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171 (746)
Q Consensus 95 L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 171 (746)
|+.++++.+... .+...+.++.+.++.+.+... ..+...++|+.|++++|.+..
T Consensus 109 -----------------L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~---- 165 (227)
T d1h6ua2 109 -----------------IKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSD---- 165 (227)
T ss_dssp -----------------CCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCC----
T ss_pred -----------------ccccccccccccccchhccccchhhhhchhhhhchh--hhhcccccccccccccccccc----
Confidence 455555555442 345567777788888777643 336677888888888888764
Q ss_pred CccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccc
Q 041467 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMES 241 (746)
Q Consensus 172 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~ 241 (746)
. ..+.++++|+.|+|++|++++ +| .+..++ +|++|++++|++++ ++ .++++++|+.|++++
T Consensus 166 ---~-~~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~-~L~~L~Ls~N~lt~-i~-~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 166 ---L-TPLANLSKLTTLKADDNKISD-IS-PLASLP-NLIEVHLKNNQISD-VS-PLANTSNLFIVTLTN 226 (227)
T ss_dssp ---C-GGGTTCTTCCEEECCSSCCCC-CG-GGGGCT-TCCEEECTTSCCCB-CG-GGTTCTTCCEEEEEE
T ss_pred ---c-hhhcccccceecccCCCccCC-Ch-hhcCCC-CCCEEECcCCcCCC-Cc-ccccCCCCCEEEeeC
Confidence 1 236778888888888888874 44 377776 79999999998885 43 388899999998863
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.72 E-value=4.2e-17 Score=158.15 Aligned_cols=179 Identities=25% Similarity=0.319 Sum_probs=117.6
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccC
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 99 (746)
+...++..+.+++.++. ..+.+|++|++++|.++. ++ .+..+++|++|+|++|++.+. + .++.+++|+.|++++
T Consensus 26 ~i~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~ 99 (210)
T d1h6ta2 26 TIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDE 99 (210)
T ss_dssp HHHHHTTCSCTTSEECH--HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCS
T ss_pred HHHHHhCcCccCCccCH--HHhcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccCc-c-ccccCcccccccccc
Confidence 33445666666554443 235566677777777663 32 356666777777777766542 2 256666777777766
Q ss_pred CCCc--CcccCCCCCCEEeccCCCcc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 100 GGRI--DSLGHLKSLLLLSLAFNQFL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 100 ~~~~--~~~~~l~~L~~L~Ls~N~l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
|... ..+.++++|+.|++++|.+. .+.+++.|+.+++++|.++. +..+..+++|+++++++|++++
T Consensus 100 n~i~~l~~l~~l~~L~~L~l~~~~~~~~~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~------- 170 (210)
T d1h6ta2 100 NKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISD------- 170 (210)
T ss_dssp SCCCCGGGGTTCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCC-------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccc-------
Confidence 5432 35667777777777777663 35567778888888888764 3346677888888888888764
Q ss_pred ccccccCCCCCCEEEcccccccccCChhhhhcccccceEEccc
Q 041467 175 FINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGS 217 (746)
Q Consensus 175 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~ 217 (746)
++ .+.++++|+.|+|++|+++ .+| .+..++ +|++|+|++
T Consensus 171 i~-~l~~l~~L~~L~Ls~N~i~-~l~-~l~~l~-~L~~L~Ls~ 209 (210)
T d1h6ta2 171 IV-PLAGLTKLQNLYLSKNHIS-DLR-ALAGLK-NLDVLELFS 209 (210)
T ss_dssp CG-GGTTCTTCCEEECCSSCCC-BCG-GGTTCT-TCSEEEEEE
T ss_pred cc-cccCCCCCCEEECCCCCCC-CCh-hhcCCC-CCCEEEccC
Confidence 22 2677888888888888887 455 477776 688888764
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.72 E-value=1.1e-17 Score=162.27 Aligned_cols=183 Identities=20% Similarity=0.276 Sum_probs=138.5
Q ss_pred ccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCC
Q 041467 42 ISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQ 121 (746)
Q Consensus 42 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~ 121 (746)
.++...+++.+.+++.++. ..+.+|+.|++++|.+... + .+..+++|++|+|++|+
T Consensus 24 ~~~i~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l-~---------------------~l~~l~~L~~L~L~~n~ 79 (210)
T d1h6ta2 24 AETIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSV-Q---------------------GIQYLPNVTKLFLNGNK 79 (210)
T ss_dssp HHHHHHHTTCSCTTSEECH--HHHHTCCEEECTTSCCCCC-T---------------------TGGGCTTCCEEECCSSC
T ss_pred HHHHHHHhCcCccCCccCH--HHhcCccEEECcCCCCCCc-h---------------------hHhhCCCCCEEeCCCcc
Confidence 4455567888888876553 3567899999999987432 1 23445666666667776
Q ss_pred cc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEccccccccc
Q 041467 122 FL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGV 198 (746)
Q Consensus 122 l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 198 (746)
+. .+.++++|+.|++++|+|++. + .+..+++|+.|++++|.+.. ...+..+++|+.+++++|.+++
T Consensus 80 i~~l~~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~l~~~~~~~--------~~~l~~l~~l~~l~~~~n~l~~- 148 (210)
T d1h6ta2 80 LTDIKPLANLKNLGWLFLDENKVKDL-S-SLKDLKKLKSLSLEHNGISD--------INGLVHLPQLESLYLGNNKITD- 148 (210)
T ss_dssp CCCCGGGTTCTTCCEEECCSSCCCCG-G-GGTTCTTCCEEECTTSCCCC--------CGGGGGCTTCCEEECCSSCCCC-
T ss_pred ccCccccccCcccccccccccccccc-c-cccccccccccccccccccc--------cccccccccccccccccccccc-
Confidence 64 355778888899998988853 3 47889999999999988754 2346788899999999998874
Q ss_pred CChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccc
Q 041467 199 LPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGG 265 (746)
Q Consensus 199 ~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 265 (746)
+..+..++ +|+.+++++|++++ ++ .++++++|++|+|++|+++. +| .+.++++|++|+|++
T Consensus 149 -~~~~~~l~-~L~~l~l~~n~l~~-i~-~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 149 -ITVLSRLT-KLDTLSLEDNQISD-IV-PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp -CGGGGGCT-TCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred -cccccccc-cccccccccccccc-cc-cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence 34566776 79999999999986 33 38899999999999999874 55 588999999999875
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.72 E-value=1.6e-17 Score=158.73 Aligned_cols=173 Identities=17% Similarity=0.216 Sum_probs=125.5
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccC-CccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEcc
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAI-PANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID 98 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 98 (746)
.+.++.++++++ .+|..+. +++++|+|++|+|++.+ +..|.++++|+.|+|++|++....+..+
T Consensus 10 ~~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~------------ 74 (192)
T d1w8aa_ 10 GTTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAF------------ 74 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTT------------
T ss_pred CCEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeecccccccccccccc------------
Confidence 468999999998 6777663 68999999999997644 5667889999999999988866555433
Q ss_pred CCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccccc
Q 041467 99 CGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINL 178 (746)
Q Consensus 99 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 178 (746)
..+++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++ .+..
T Consensus 75 ---------------------------~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i------~~~~ 121 (192)
T d1w8aa_ 75 ---------------------------EGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCV------MPGS 121 (192)
T ss_dssp ---------------------------TTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEE------CTTS
T ss_pred ---------------------------ccccccceeeeccccccccCHHHHhCCCcccccccCCcccccc------CHHH
Confidence 3455667777788888888888888899999999999998873 3455
Q ss_pred ccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccce
Q 041467 179 LTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLI 245 (746)
Q Consensus 179 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~ 245 (746)
|..+++|++|+|++|.+....+..+ +...++.+.+..|.++...|.. +.+++.++|+.|.+.
T Consensus 122 f~~l~~L~~l~L~~N~~~~~~~~~~--~~~~l~~~~l~~~~~~c~~p~~---l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 122 FEHLNSLTSLNLASNPFNCNCHLAW--FAEWLRKKSLNGGAARCGAPSK---VRDVQIKDLPHSEFK 183 (192)
T ss_dssp STTCTTCCEEECTTCCBCCSGGGHH--HHHHHHHHCCSGGGCBBCSSTT---TTTSBGGGSCTTTCC
T ss_pred hcCCcccccccccccccccccchHH--HhhhhhhhcccCCCeEeCCChh---hcCCEeeecCHhhCc
Confidence 7788889999999988875433222 1124566667777776655543 345566677777664
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.71 E-value=1.9e-17 Score=158.15 Aligned_cols=132 Identities=20% Similarity=0.285 Sum_probs=110.9
Q ss_pred CcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhccccc
Q 041467 131 LEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTI 210 (746)
Q Consensus 131 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L 210 (746)
.+.+++++|+++. +|..+. +++++|+|++|+|+... .+..|.++++|+.|+|++|.+.+..+..+..+. .|
T Consensus 10 ~~~v~Cs~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~~~-----~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~-~L 80 (192)
T d1w8aa_ 10 GTTVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRIS-----SDGLFGRLPHLVKLELKRNQLTGIEPNAFEGAS-HI 80 (192)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBC-----CSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCT-TC
T ss_pred CCEEEEeCCCcCc-cCCCCC--CCCCEEEeCCCCCcccc-----cccccCCCceEeeeecccccccccccccccccc-cc
Confidence 4567888888874 454442 67889999999987522 234578889999999999999988888888887 79
Q ss_pred ceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccc
Q 041467 211 KQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGS 271 (746)
Q Consensus 211 ~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 271 (746)
++|+|++|+|++..|++|.++++|++|+|++|+|++..|.+|..+++|++|+|++|.+...
T Consensus 81 ~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~ 141 (192)
T d1w8aa_ 81 QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred ceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccc
Confidence 9999999999988888999999999999999999998899999999999999999998753
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.71 E-value=9.2e-17 Score=154.32 Aligned_cols=174 Identities=23% Similarity=0.257 Sum_probs=115.7
Q ss_pred cEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCC
Q 041467 21 RYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCG 100 (746)
Q Consensus 21 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~ 100 (746)
..+.++.+.+++.++. ..+.+|++|++++|.++. ++ .+..+++|++|++++|++.+..+ ++++++|+.|+++.+
T Consensus 21 i~~~l~~~~~~~~~~~--~~l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n 94 (199)
T d2omxa2 21 MKTVLGKTNVTDTVSQ--TDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNN 94 (199)
T ss_dssp HHHHTTCSSTTSEECH--HHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHHhCCCCCCCccCH--HHhcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccCccc--ccCCccccccccccc
Confidence 3445666666543332 345566666666666663 32 35666666666666666644322 666666666666654
Q ss_pred CCc--CcccCCCCCCEEeccCCCcc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccc
Q 041467 101 GRI--DSLGHLKSLLLLSLAFNQFL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDF 175 (746)
Q Consensus 101 ~~~--~~~~~l~~L~~L~Ls~N~l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 175 (746)
... ..+.++++|+.|++++|.+. .+..+++|+.|++++|++... ..+..+++|++|++++|++++.
T Consensus 95 ~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~~~~L~~L~l~~n~l~~l------- 165 (199)
T d2omxa2 95 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNFSSNQVTDL------- 165 (199)
T ss_dssp CCCCCGGGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCCC-------
T ss_pred ccccccccccccccccccccccccccccccchhhhhHHhhhhhhhhccc--ccccccccccccccccccccCC-------
Confidence 332 44677777888888777773 456778888888888888742 3577888888999988888752
Q ss_pred cccccCCCCCCEEEcccccccccCChhhhhcccccceE
Q 041467 176 INLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQI 213 (746)
Q Consensus 176 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L 213 (746)
..+.++++|+.|++++|++++ +| .+..++ +|+.|
T Consensus 166 -~~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~-~L~~L 199 (199)
T d2omxa2 166 -KPLANLTTLERLDISSNKVSD-IS-VLAKLT-NLESL 199 (199)
T ss_dssp -GGGTTCTTCCEEECCSSCCCC-CG-GGGGCT-TCSEE
T ss_pred -ccccCCCCCCEEECCCCCCCC-Cc-cccCCC-CCCcC
Confidence 237788889999999988874 44 466666 57654
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=2.8e-17 Score=163.34 Aligned_cols=212 Identities=13% Similarity=0.040 Sum_probs=126.3
Q ss_pred CcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccC-CccccCCCCCCeeeCcC-CCCCCcc
Q 041467 5 NLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAI-PANLSSGSNLIKLSTDS-NNLVRDI 82 (746)
Q Consensus 5 ~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~-N~l~~~~ 82 (746)
++.++|.... +++++|+|++|+|+...+.+|.++++|++|+|++|.+...+ +..|.+++++++|++.. |++....
T Consensus 19 ~l~~iP~~l~---~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~ 95 (242)
T d1xwdc1 19 KVTEIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYIN 95 (242)
T ss_dssp SCSSCCSCSC---SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEEC
T ss_pred CCCCcCCCCC---CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccc
Confidence 4555554332 57999999999998666668999999999999999997654 45789999999999865 5554444
Q ss_pred chhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCc-cccCCCCCCEEEcc
Q 041467 83 LTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSV-DFSRLKNLSWLNLG 161 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls 161 (746)
+..|.++++ |+.|++++|+ +....+. .+..+..|..+..+
T Consensus 96 ~~~~~~l~~--------------------L~~l~l~~~~-------------------l~~~~~~~~~~~l~~l~~~~~~ 136 (242)
T d1xwdc1 96 PEAFQNLPN--------------------LQYLLISNTG-------------------IKHLPDVHKIHSLQKVLLDIQD 136 (242)
T ss_dssp TTSEECCTT--------------------CCEEEEESCC-------------------CCSCCCCTTTCBSSCEEEEEES
T ss_pred ccccccccc--------------------ccccccchhh-------------------hccccccccccccccccccccc
Confidence 443443333 3333333333 3221111 11223333333444
Q ss_pred CCCCCCCCCCCccccccccCC-CCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecc
Q 041467 162 VNNLGSGTANELDFINLLTNC-SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTME 240 (746)
Q Consensus 162 ~N~l~~~~~~~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~ 240 (746)
++.+..... ..|.++ ..++.|++++|+++. ++...+.....++.+++++|+++...++.|.++++|++|+|+
T Consensus 137 n~~l~~i~~------~~~~~~~~~l~~L~l~~n~l~~-i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls 209 (242)
T d1xwdc1 137 NINIHTIER------NSFVGLSFESVILWLNKNGIQE-IHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDIS 209 (242)
T ss_dssp CTTCCEECT------TSSTTSBSSCEEEECCSSCCCE-ECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECT
T ss_pred ccccccccc------cccccccccceeeecccccccc-cccccccchhhhccccccccccccccHHHhcCCCCCCEEECC
Confidence 444433211 122222 256666676666663 333333443223334566777775444567778888888888
Q ss_pred cccceecCCcCCCCCCCCceeeccc
Q 041467 241 SSQLIGTIPPLIGETPNLQLLNIGG 265 (746)
Q Consensus 241 ~N~l~~~~p~~~~~l~~L~~L~Ls~ 265 (746)
+|+++...+..|.++++|+.|++.+
T Consensus 210 ~N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 210 RTRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp TSCCCCCCSSSCTTCCEEESSSEES
T ss_pred CCcCCccCHHHHcCCcccccCcCCC
Confidence 8888755555677777777666543
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.68 E-value=4.4e-16 Score=149.50 Aligned_cols=141 Identities=23% Similarity=0.311 Sum_probs=63.6
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
.+|++|++++|.++ .++ .+..+++|++|+|++|+|++. ++ ++++++|++|++++|.+.. ++ .+.++++|+.|++
T Consensus 40 ~~l~~L~l~~~~i~-~l~-~l~~l~nL~~L~Ls~N~l~~~-~~-l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l 113 (199)
T d2omxa2 40 DQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTL 113 (199)
T ss_dssp TTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEEC
T ss_pred cCCCEEECCCCCCC-Ccc-ccccCCCcCcCccccccccCc-cc-ccCCccccccccccccccc-cc-ccccccccccccc
Confidence 44445555555544 222 244455555555555555432 21 4445555555555444422 11 2444555555555
Q ss_pred cCCCCc--CcccCCCCCCEEeccCCCcc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCC
Q 041467 98 DCGGRI--DSLGHLKSLLLLSLAFNQFL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLG 166 (746)
Q Consensus 98 ~~~~~~--~~~~~l~~L~~L~Ls~N~l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 166 (746)
+++... ..+..+++|+.|++++|++. .+..+++|+.|++++|++++.. .|+++++|++|++++|+++
T Consensus 114 ~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~l~~~~~L~~L~l~~n~l~~l~--~l~~l~~L~~L~ls~N~i~ 185 (199)
T d2omxa2 114 FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLK--PLANLTTLERLDISSNKVS 185 (199)
T ss_dssp CSSCCCCCGGGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred cccccccccccchhhhhHHhhhhhhhhcccccccccccccccccccccccCCc--cccCCCCCCEEECCCCCCC
Confidence 443222 23444455555555555442 2334445555555555554321 2444555555555555444
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=3.5e-18 Score=186.41 Aligned_cols=105 Identities=17% Similarity=0.185 Sum_probs=70.1
Q ss_pred ccccEEecccCcCccc-CchhhhCCccCcEEecccCcCCc----cCCccccCCCCCCeeeCcCCCCCCc----cchhhc-
Q 041467 18 TFLRYINLVNNGFNGE-IPHQIGRLISLERLILSNNSFSC----AIPANLSSGSNLIKLSTDSNNLVRD----ILTEIC- 87 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~~~~~~- 87 (746)
+.|++||+++|++++. +.+.+..+++|++|+|++|.|+. .++..+..+++|+.|||++|.+... +...+.
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 3578888888888742 24456677888888888888763 2345567788888888888876421 112222
Q ss_pred CCCCCCEEEccCCCCc--------CcccCCCCCCEEeccCCCc
Q 041467 88 SLFKLERLRIDCGGRI--------DSLGHLKSLLLLSLAFNQF 122 (746)
Q Consensus 88 ~l~~L~~L~l~~~~~~--------~~~~~l~~L~~L~Ls~N~l 122 (746)
...+|++|+|+++... ..+..+++|+.|+|++|.+
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i 124 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLL 124 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBC
T ss_pred CCCCCCEEECCCCCccccccccccchhhccccccccccccccc
Confidence 2346888888776542 2456677888888888876
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=1.4e-17 Score=181.61 Aligned_cols=336 Identities=18% Similarity=0.188 Sum_probs=213.5
Q ss_pred cccccccEEecccCcCcc----cCchhhhCCccCcEEecccCcCCcc----CCcccc-CCCCCCeeeCcCCCCCCc----
Q 041467 15 ILRTFLRYINLVNNGFNG----EIPHQIGRLISLERLILSNNSFSCA----IPANLS-SGSNLIKLSTDSNNLVRD---- 81 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~-~l~~L~~L~L~~N~l~~~---- 81 (746)
..++++++|+|++|+|+. .+...+..+++|++|||++|.|+.. +...+. ...+|++|+|++|.+...
T Consensus 24 ~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~ 103 (460)
T d1z7xw1 24 PLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGV 103 (460)
T ss_dssp HHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHH
T ss_pred HhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCcccccccc
Confidence 446889999999999873 4566778899999999999998631 222332 235799999999998643
Q ss_pred cchhhcCCCCCCEEEccCCCCc-------------------------------------CcccCCCCCCEEeccCCCccc
Q 041467 82 ILTEICSLFKLERLRIDCGGRI-------------------------------------DSLGHLKSLLLLSLAFNQFLS 124 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~~-------------------------------------~~~~~l~~L~~L~Ls~N~l~~ 124 (746)
++..+..+++|++|++++|..- ..+.....++.++++.+....
T Consensus 104 l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ls~~~~~~ 183 (460)
T d1z7xw1 104 LSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINE 183 (460)
T ss_dssp HHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred ccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhccccccccccccccccccccccccc
Confidence 4566788999999999865321 011223566777777766521
Q ss_pred ---------c-cCCCCCcEeeCccCcccccC----CccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEc
Q 041467 125 ---------L-SNASSLEMIEFSRNQFSGGV----SVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYF 190 (746)
Q Consensus 125 ---------l-~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~L 190 (746)
+ ........+++..+.+.... ...+...+.++.++++.|.+...... ............|+.|++
T Consensus 184 ~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~-~~~~~~~~~~~~l~~l~l 262 (460)
T d1z7xw1 184 AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA-ELCPGLLHPSSRLRTLWI 262 (460)
T ss_dssp HHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH-HHHHHHTSTTCCCCEEEC
T ss_pred ccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccccccc-hhhccccccccccccccc
Confidence 1 12345667777777654221 12244568899999999876321000 012233456778999999
Q ss_pred ccccccccC----ChhhhhcccccceEEcccCcccccCCcc-----ccCCCCCCeeecccccceecCCc----CCCCCCC
Q 041467 191 NRNGFEGVL----PHSIANLSSTIKQIAMGSNRISSTIPHG-----IRNLVNLNWLTMESSQLIGTIPP----LIGETPN 257 (746)
Q Consensus 191 s~N~l~~~~----p~~~~~l~~~L~~L~l~~N~i~~~~p~~-----~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~ 257 (746)
++|.+.... ...+.... .++.+++++|.++...... ......|+.+++++|.+...... .+...++
T Consensus 263 ~~n~i~~~~~~~~~~~l~~~~-~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~ 341 (460)
T d1z7xw1 263 WECGITAKGCGDLCRVLRAKE-SLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRF 341 (460)
T ss_dssp TTSCCCHHHHHHHHHHHHHCT-TCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSS
T ss_pred ccccccccccccccccccccc-cccccccccccccccccchhhccccccccccccccccccchhhhhhhhcccccccccc
Confidence 999886432 22334444 6899999999886422221 12346799999999988744322 3345678
Q ss_pred CceeecccccccccccccccccChHHhhhccCCCCCCcccc-CCCCCCeeeecCCcCcc----ccchhhhhcccccceEE
Q 041467 258 LQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLA-NCKSLLGLSVSHNKLTS----TLPQQILSVTTLSLYLE 332 (746)
Q Consensus 258 L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~l~~~L~ 332 (746)
|++|+|++|+++...... ++..+. ..+.|++|+|++|.|+. .++..+..+++| ++|+
T Consensus 342 L~~L~Ls~N~i~~~g~~~-----------------l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L-~~L~ 403 (460)
T d1z7xw1 342 LLELQISNNRLEDAGVRE-----------------LCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSL-RELD 403 (460)
T ss_dssp CCEEECCSSBCHHHHHHH-----------------HHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCC-CEEE
T ss_pred hhhhheeeecccCcccch-----------------hhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCC-CEEE
Confidence 999999999986421111 112222 34568888888888863 244556666777 5788
Q ss_pred ccCccccccCchhhhc-ccCCceeecCCCCCCCCCCCEEEccCCcCcccC
Q 041467 333 LDNNLLNGSLPPEVGN-LKNLLRLHIPEYPENLSFFELLNLSYNYFGSEV 381 (746)
Q Consensus 333 Ls~N~l~~~~p~~~~~-l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~ 381 (746)
|++|+|+......+.. ++ .+.+.|+.|++++|.+....
T Consensus 404 Ls~N~i~~~g~~~l~~~l~-----------~~~~~L~~l~l~~~~~~~~~ 442 (460)
T d1z7xw1 404 LSNNCLGDAGILQLVESVR-----------QPGCLLEQLVLYDIYWSEEM 442 (460)
T ss_dssp CCSSSCCHHHHHHHHHHHT-----------STTCCCCEEECTTCCCCHHH
T ss_pred CCCCcCCHHHHHHHHHHHH-----------hCCCccCEEECCCCCCCHHH
Confidence 8888887533333321 11 13345777888888776543
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=1.2e-14 Score=147.42 Aligned_cols=171 Identities=19% Similarity=0.221 Sum_probs=81.3
Q ss_pred CccCcEEecccCcCCcc-CCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcC------cccCCCCCC
Q 041467 41 LISLERLILSNNSFSCA-IPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRID------SLGHLKSLL 113 (746)
Q Consensus 41 l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~------~~~~l~~L~ 113 (746)
..+|++|||++|.++.. ++..+..+++|++|+|++|.+....+..+..+++|++|+++++..+. ...++++|+
T Consensus 45 ~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~ 124 (284)
T d2astb2 45 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 124 (284)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcc
Confidence 34555555555554422 22334445555555555555544444455555555555554422221 123455556
Q ss_pred EEeccCC-Ccc------ccc-CCCCCcEeeCccC--ccccc-CCccccCCCCCCEEEccCC-CCCCCCCCCccccccccC
Q 041467 114 LLSLAFN-QFL------SLS-NASSLEMIEFSRN--QFSGG-VSVDFSRLKNLSWLNLGVN-NLGSGTANELDFINLLTN 181 (746)
Q Consensus 114 ~L~Ls~N-~l~------~l~-~l~~L~~L~Ls~N--~l~~~-~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~~~ 181 (746)
+|+++++ .+. .+. ..++|+.|+++++ .++.. +...+..+++|++|++++| .++. ..+..+..
T Consensus 125 ~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd------~~~~~l~~ 198 (284)
T d2astb2 125 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKN------DCFQEFFQ 198 (284)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCG------GGGGGGGG
T ss_pred ccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCc------hhhhhhcc
Confidence 6666553 221 111 2345666666543 22211 1122234566666666654 2332 23344555
Q ss_pred CCCCCEEEcccc-cccccCChhhhhcccccceEEcccC
Q 041467 182 CSKLERLYFNRN-GFEGVLPHSIANLSSTIKQIAMGSN 218 (746)
Q Consensus 182 l~~L~~L~Ls~N-~l~~~~p~~~~~l~~~L~~L~l~~N 218 (746)
+++|++|+|+++ .+++.....+++++ +|+.|+++++
T Consensus 199 ~~~L~~L~L~~C~~i~~~~l~~L~~~~-~L~~L~l~~~ 235 (284)
T d2astb2 199 LNYLQHLSLSRCYDIIPETLLELGEIP-TLKTLQVFGI 235 (284)
T ss_dssp CTTCCEEECTTCTTCCGGGGGGGGGCT-TCCEEECTTS
T ss_pred cCcCCEEECCCCCCCChHHHHHHhcCC-CCCEEeeeCC
Confidence 666666666663 45444444455554 5666666554
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.50 E-value=3.7e-14 Score=124.09 Aligned_cols=56 Identities=25% Similarity=0.373 Sum_probs=44.7
Q ss_pred cEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCC
Q 041467 21 RYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79 (746)
Q Consensus 21 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 79 (746)
|+|||++|+|+ .+| .++.+++|++|||++|+|+ .+|..|+.+++|+.|++++|.+.
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~ 56 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE 56 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc
Confidence 57888888887 555 3788888888888888887 56777888888888888888774
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=1.2e-14 Score=147.55 Aligned_cols=218 Identities=13% Similarity=0.142 Sum_probs=125.7
Q ss_pred cEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc-chhhcCCCCCCEEEccC
Q 041467 21 RYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI-LTEICSLFKLERLRIDC 99 (746)
Q Consensus 21 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~l~~ 99 (746)
+.|||+++.+.......+.. ..+..+.++...+.. .........+|++|||++|.+.... ...+..+++|++|+++
T Consensus 3 ~~lDLs~~~l~~~~l~~l~~-~~~~~lrl~~~~~~~-~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~- 79 (284)
T d2astb2 3 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQ-PLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLE- 79 (284)
T ss_dssp SEEECTTCBCCHHHHHHHHH-TTCSEEECTTCEECS-CCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECT-
T ss_pred CEEECCCCCCCchHHHHHHh-ccceEeecccccccc-chhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCccccccc-
Confidence 47899998875322222221 235677777777653 2333445678999999988775433 3334455555555554
Q ss_pred CCCcCcccCCCCCCEEeccCCCc-----ccccCCCCCcEeeCccC-ccccc-CCccccCCCCCCEEEccCC-CCCCCCCC
Q 041467 100 GGRIDSLGHLKSLLLLSLAFNQF-----LSLSNASSLEMIEFSRN-QFSGG-VSVDFSRLKNLSWLNLGVN-NLGSGTAN 171 (746)
Q Consensus 100 ~~~~~~~~~l~~L~~L~Ls~N~l-----~~l~~l~~L~~L~Ls~N-~l~~~-~~~~~~~l~~L~~L~Ls~N-~l~~~~~~ 171 (746)
++.+ ..+..+++|+.|+++++ .++.. +...+.++++|++|+++++ .++..
T Consensus 80 -------------------~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~--- 137 (284)
T d2astb2 80 -------------------GLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK--- 137 (284)
T ss_dssp -------------------TCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH---
T ss_pred -------------------ccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccc---
Confidence 4443 23445566666666663 34321 1122345677777777763 33210
Q ss_pred Cccccccc-cCCCCCCEEEcccc--ccccc-CChhhhhcccccceEEcccC-cccccCCccccCCCCCCeeecccc-cce
Q 041467 172 ELDFINLL-TNCSKLERLYFNRN--GFEGV-LPHSIANLSSTIKQIAMGSN-RISSTIPHGIRNLVNLNWLTMESS-QLI 245 (746)
Q Consensus 172 ~~~~~~~~-~~l~~L~~L~Ls~N--~l~~~-~p~~~~~l~~~L~~L~l~~N-~i~~~~p~~~~~l~~L~~L~L~~N-~l~ 245 (746)
.+...+ ..+++|+.|++++. .++.. +...+..++ +|++|++++| .+++.....+..+++|++|+|++| .++
T Consensus 138 --~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~-~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~ 214 (284)
T d2astb2 138 --HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCP-NLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDII 214 (284)
T ss_dssp --HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCT-TCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCC
T ss_pred --cchhhhcccccccchhhhcccccccccccccccccccc-cccccccccccCCCchhhhhhcccCcCCEEECCCCCCCC
Confidence 111112 23467777777754 23321 222223344 6888888765 466666667777888888888874 555
Q ss_pred ecCCcCCCCCCCCceeecccc
Q 041467 246 GTIPPLIGETPNLQLLNIGGN 266 (746)
Q Consensus 246 ~~~p~~~~~l~~L~~L~Ls~N 266 (746)
......++++++|+.|+++++
T Consensus 215 ~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 215 PETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp GGGGGGGGGCTTCCEEECTTS
T ss_pred hHHHHHHhcCCCCCEEeeeCC
Confidence 555556777888888888776
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=4.8e-14 Score=129.73 Aligned_cols=127 Identities=13% Similarity=0.179 Sum_probs=99.6
Q ss_pred cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhh
Q 041467 124 SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSI 203 (746)
Q Consensus 124 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 203 (746)
.+.+...|++|+|++|+|+.+ +..+..+++|+.|+|++|.|+. + +.|..+++|++|++++|+++...+..+
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~~-------l-~~~~~l~~L~~L~ls~N~i~~l~~~~~ 83 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRK-------L-DGFPLLRRLKTLLVNNNRICRIGEGLD 83 (162)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCE-------E-CCCCCCSSCCEEECCSSCCCEECSCHH
T ss_pred hccCcCcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCCc-------c-CCcccCcchhhhhcccccccCCCcccc
Confidence 355677888888889988854 5667788999999999999875 2 247788999999999999986555556
Q ss_pred hhcccccceEEcccCcccccCC--ccccCCCCCCeeecccccceecCCc----CCCCCCCCceee
Q 041467 204 ANLSSTIKQIAMGSNRISSTIP--HGIRNLVNLNWLTMESSQLIGTIPP----LIGETPNLQLLN 262 (746)
Q Consensus 204 ~~l~~~L~~L~l~~N~i~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~ 262 (746)
..++ +|+.|++++|+|+. ++ ..+..+++|++|++++|.++. .|. .+..+++|++||
T Consensus 84 ~~l~-~L~~L~L~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~~-~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 84 QALP-DLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp HHCT-TCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEET
T ss_pred cccc-ccccceeccccccc-cccccccccccccchhhcCCCcccc-ccchHHHHHHHCCCcCeeC
Confidence 6676 79999999999984 44 367888999999999998863 443 467788999887
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=3.1e-14 Score=131.01 Aligned_cols=133 Identities=14% Similarity=0.059 Sum_probs=78.5
Q ss_pred ccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCC
Q 041467 12 PLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFK 91 (746)
Q Consensus 12 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 91 (746)
|.+.....|++|||++|+|+ .+|..+..+++|++||||+|+|+. ++ .|..+++|++|++++|.+....+..+
T Consensus 12 ~~~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~----- 83 (162)
T d1a9na_ 12 AQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLD----- 83 (162)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHH-----
T ss_pred HhccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCcccc-----
Confidence 33455567788888888886 456666777888888888888873 43 47777888888888887744322222
Q ss_pred CCEEEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCC-ccccCCCCCCEEEccCCCCCCCCC
Q 041467 92 LERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVS-VDFSRLKNLSWLNLGVNNLGSGTA 170 (746)
Q Consensus 92 L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~ 170 (746)
. .+++|+.|++++|+|+.... ..+..+++|++|++++|.++..+.
T Consensus 84 ---------------~-------------------~l~~L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~ 129 (162)
T d1a9na_ 84 ---------------Q-------------------ALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKH 129 (162)
T ss_dssp ---------------H-------------------HCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTT
T ss_pred ---------------c-------------------cccccccceeccccccccccccccccccccchhhcCCCccccccc
Confidence 2 23344444444444443211 245566666666666666643211
Q ss_pred CCccccccccCCCCCCEEE
Q 041467 171 NELDFINLLTNCSKLERLY 189 (746)
Q Consensus 171 ~~~~~~~~~~~l~~L~~L~ 189 (746)
.-+..+..+++|++||
T Consensus 130 ---~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 130 ---YRLYVIYKVPQVRVLD 145 (162)
T ss_dssp ---HHHHHHHHCTTCSEET
T ss_pred ---hHHHHHHHCCCcCeeC
Confidence 0112355667777766
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.44 E-value=2.1e-14 Score=150.27 Aligned_cols=162 Identities=19% Similarity=0.280 Sum_probs=96.9
Q ss_pred cCCCCCCEEeccCCCccc------------------ccCCCCCcEeeCccCccccc----CCccccCCCCCCEEEccCCC
Q 041467 107 GHLKSLLLLSLAFNQFLS------------------LSNASSLEMIEFSRNQFSGG----VSVDFSRLKNLSWLNLGVNN 164 (746)
Q Consensus 107 ~~l~~L~~L~Ls~N~l~~------------------l~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~ 164 (746)
...++|+.|++++|.+.. ....+.|+.|++++|+++.. +...+...++|+.|+|++|.
T Consensus 118 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~ 197 (344)
T d2ca6a1 118 SKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNG 197 (344)
T ss_dssp HHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSC
T ss_pred cccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhccccccccc
Confidence 345667777777776521 12456777777777776522 12224456778888888777
Q ss_pred CCCCCCCCccccccccCCCCCCEEEccccccccc----CChhhhhcccccceEEcccCcccccCCc----cccC--CCCC
Q 041467 165 LGSGTANELDFINLLTNCSKLERLYFNRNGFEGV----LPHSIANLSSTIKQIAMGSNRISSTIPH----GIRN--LVNL 234 (746)
Q Consensus 165 l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~~L~~L~l~~N~i~~~~p~----~~~~--l~~L 234 (746)
++..... ..+...+..+++|+.|+|++|.++.. +...+...+ .|++|++++|.|++.-.. .+.. ...|
T Consensus 198 i~~~g~~-~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~-~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L 275 (344)
T d2ca6a1 198 IRPEGIE-HLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP-NLRELGLNDCLLSARGAAAVVDAFSKLENIGL 275 (344)
T ss_dssp CCHHHHH-HHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT-TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCC
T ss_pred ccccccc-cchhhhhcchhhhcccccccccccccccccccccccccc-cchhhhhhcCccCchhhHHHHHHhhhccCCCC
Confidence 7531000 00223456677788888888877532 223344444 678888888877643222 2222 3568
Q ss_pred Ceeecccccceec----CCcCC-CCCCCCceeecccccccc
Q 041467 235 NWLTMESSQLIGT----IPPLI-GETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 235 ~~L~L~~N~l~~~----~p~~~-~~l~~L~~L~Ls~N~l~~ 270 (746)
++|++++|++... +...+ .++++|++|+|++|++..
T Consensus 276 ~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 276 QTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp CEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 8889988887532 22223 246789999999999864
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.43 E-value=4.2e-14 Score=147.90 Aligned_cols=229 Identities=14% Similarity=0.138 Sum_probs=167.9
Q ss_pred cccccccEEecccCcCccc----CchhhhCCccCcEEecccCcCCcc----------CCccccCCCCCCeeeCcCCCCCC
Q 041467 15 ILRTFLRYINLVNNGFNGE----IPHQIGRLISLERLILSNNSFSCA----------IPANLSSGSNLIKLSTDSNNLVR 80 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----------~p~~~~~l~~L~~L~L~~N~l~~ 80 (746)
...+.|+.|+|++|.|... +-..+...++|+.|+++++.+... +...+...++|+.|+|++|.+..
T Consensus 28 ~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 107 (344)
T d2ca6a1 28 LEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGP 107 (344)
T ss_dssp HHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCT
T ss_pred hhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccccc
Confidence 3367899999999998643 344566789999999998876422 12235567899999999999865
Q ss_pred c----cchhhcCCCCCCEEEccCCCCcC-----------------cccCCCCCCEEeccCCCcc---------cccCCCC
Q 041467 81 D----ILTEICSLFKLERLRIDCGGRID-----------------SLGHLKSLLLLSLAFNQFL---------SLSNASS 130 (746)
Q Consensus 81 ~----~~~~~~~l~~L~~L~l~~~~~~~-----------------~~~~l~~L~~L~Ls~N~l~---------~l~~l~~ 130 (746)
. +...+...++|++|+++.+.... .....+.|+.+++++|++. .+...+.
T Consensus 108 ~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~ 187 (344)
T d2ca6a1 108 TAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRL 187 (344)
T ss_dssp TTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTT
T ss_pred ccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhh
Confidence 4 34456678999999998765321 1235678999999999983 2456789
Q ss_pred CcEeeCccCccccc-----CCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhh
Q 041467 131 LEMIEFSRNQFSGG-----VSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIAN 205 (746)
Q Consensus 131 L~~L~Ls~N~l~~~-----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 205 (746)
|+.|+|++|+|+.. +...+..+++|+.|+|++|.++.... ..+...+..+++|++|+|++|.|++.-...++.
T Consensus 188 L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~--~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~ 265 (344)
T d2ca6a1 188 LHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGS--SALAIALKSWPNLRELGLNDCLLSARGAAAVVD 265 (344)
T ss_dssp CCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHH--HHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred hcccccccccccccccccchhhhhcchhhhccccccccccccccc--ccccccccccccchhhhhhcCccCchhhHHHHH
Confidence 99999999998742 23456778999999999999853110 123456788999999999999997543333322
Q ss_pred ----cc-cccceEEcccCccccc----CCccc-cCCCCCCeeecccccce
Q 041467 206 ----LS-STIKQIAMGSNRISST----IPHGI-RNLVNLNWLTMESSQLI 245 (746)
Q Consensus 206 ----l~-~~L~~L~l~~N~i~~~----~p~~~-~~l~~L~~L~L~~N~l~ 245 (746)
.. ..|+.|++++|+|+.. +...+ .++++|+.|+|++|++.
T Consensus 266 ~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 266 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred HhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCC
Confidence 11 2699999999998742 23333 25789999999999986
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.43 E-value=2.5e-13 Score=118.66 Aligned_cols=87 Identities=25% Similarity=0.381 Sum_probs=45.6
Q ss_pred ccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecC-CcCCCCCCC
Q 041467 179 LTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI-PPLIGETPN 257 (746)
Q Consensus 179 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~ 257 (746)
+..+++|++|++++|+|+ .+|..++.+. +|+.|++++|+|++ +| .++++++|++|++++|++.... ...++.+++
T Consensus 16 l~~l~~L~~L~ls~N~l~-~lp~~~~~l~-~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~ 91 (124)
T d1dcea3 16 LEQLLLVTHLDLSHNRLR-ALPPALAALR-CLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPR 91 (124)
T ss_dssp GGGGTTCCEEECCSSCCC-CCCGGGGGCT-TCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTT
T ss_pred cccCCCCCEEECCCCccC-cchhhhhhhh-cccccccccccccc-cC-ccccccccCeEECCCCccCCCCCchhhcCCCC
Confidence 344445555555555554 3444455444 45555555555553 22 3555556666666666655322 134555666
Q ss_pred Cceeeccccccc
Q 041467 258 LQLLNIGGNHLQ 269 (746)
Q Consensus 258 L~~L~Ls~N~l~ 269 (746)
|+.|++++|.++
T Consensus 92 L~~L~l~~N~i~ 103 (124)
T d1dcea3 92 LVLLNLQGNSLC 103 (124)
T ss_dssp CCEEECTTSGGG
T ss_pred CCEEECCCCcCC
Confidence 666666666665
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.25 E-value=8.4e-14 Score=132.74 Aligned_cols=148 Identities=22% Similarity=0.187 Sum_probs=104.7
Q ss_pred ccccEEecccC--cCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEE
Q 041467 18 TFLRYINLVNN--GFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERL 95 (746)
Q Consensus 18 ~~L~~L~Ls~N--~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 95 (746)
..++.++++++ .+. .+|..+..+++|++|+|++|+|+. ++ .|.++++|+.|+|++|.+. .+|..+.
T Consensus 23 ~~~~~~~l~~~~~~i~-~l~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~-------- 90 (198)
T d1m9la_ 23 TEAEKVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA-------- 90 (198)
T ss_dssp TTCSCEECCBCCTTCC-CCHHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHH--------
T ss_pred cccceeeeecccCchh-hhhhHHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccc-ccccccc--------
Confidence 34667777765 354 677899999999999999999984 55 5889999999999999874 3333222
Q ss_pred EccCCCCcCcccCCCCCCEEeccCCCccc---ccCCCCCcEeeCccCcccccCC-ccccCCCCCCEEEccCCCCCCCCCC
Q 041467 96 RIDCGGRIDSLGHLKSLLLLSLAFNQFLS---LSNASSLEMIEFSRNQFSGGVS-VDFSRLKNLSWLNLGVNNLGSGTAN 171 (746)
Q Consensus 96 ~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~---l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~ 171 (746)
.+++|+.|++++|++.. +.++++|+.|+|++|+|+.... ..|..+++|++|+|++|.+......
T Consensus 91 ------------~~~~L~~L~l~~N~i~~l~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 158 (198)
T d1m9la_ 91 ------------VADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp ------------HHHHCCEEECSEEECCCHHHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCT
T ss_pred ------------ccccccccccccccccccccccccccccccccccchhccccccccccCCCccceeecCCCccccCccc
Confidence 23456667777777644 4567788899999998875432 4678899999999999987542221
Q ss_pred Ccccc----ccccCCCCCCEEE
Q 041467 172 ELDFI----NLLTNCSKLERLY 189 (746)
Q Consensus 172 ~~~~~----~~~~~l~~L~~L~ 189 (746)
....+ ..+..+++|+.||
T Consensus 159 ~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 159 NNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp TTTHHHHHHHHHHHCSSCCEES
T ss_pred ccchhhHHHHHHHHCCCcCEeC
Confidence 11111 1256788999887
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.23 E-value=2.2e-13 Score=129.80 Aligned_cols=127 Identities=25% Similarity=0.329 Sum_probs=81.5
Q ss_pred cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhh
Q 041467 124 SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSI 203 (746)
Q Consensus 124 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 203 (746)
++..+++|+.|+|++|+|+.+ + .|..+++|+.|+|++|.|+. ++..+..+++|+.|++++|+++. + +.+
T Consensus 43 sl~~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i~~-------i~~~~~~~~~L~~L~l~~N~i~~-l-~~~ 111 (198)
T d1m9la_ 43 TLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIKK-------IENLDAVADTLEELWISYNQIAS-L-SGI 111 (198)
T ss_dssp HHHHTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEECS-------CSSHHHHHHHCCEEECSEEECCC-H-HHH
T ss_pred HHhcccccceeECcccCCCCc-c-cccCCccccChhhccccccc-------ccccccccccccccccccccccc-c-ccc
Confidence 355667777777777777743 3 36677777777777777764 22333344567777777777763 3 346
Q ss_pred hhcccccceEEcccCcccccCC-ccccCCCCCCeeecccccceecCCcC----------CCCCCCCceee
Q 041467 204 ANLSSTIKQIAMGSNRISSTIP-HGIRNLVNLNWLTMESSQLIGTIPPL----------IGETPNLQLLN 262 (746)
Q Consensus 204 ~~l~~~L~~L~l~~N~i~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~----------~~~l~~L~~L~ 262 (746)
..++ +|+.|++++|+|+.... ..+..+++|++|+|++|.+....+.. +..+++|+.||
T Consensus 112 ~~l~-~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 112 EKLV-NLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp HHHH-HSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred cccc-cccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 6665 57777777777764211 35677777777777777776544432 34566777665
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=2.9e-11 Score=109.91 Aligned_cols=82 Identities=23% Similarity=0.245 Sum_probs=39.3
Q ss_pred CEEEcccccccccCChhhhhcccccceEEcccC-cccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecc
Q 041467 186 ERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSN-RISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIG 264 (746)
Q Consensus 186 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N-~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 264 (746)
+.++.+++++. ..|..+..+. +|++|++++| .|+.+.+++|.++++|+.|+|++|++....|..|..+++|++|+|+
T Consensus 11 ~~l~c~~~~~~-~~p~~l~~l~-~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 11 SGLRCTRDGAL-DSLHHLPGAE-NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp SCEECCSSCCC-TTTTTSCSCS-CCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CeEEecCCCCc-cCcccccCcc-ccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceecc
Confidence 33444444443 2333343343 3455555433 2444333445555555555555555555445555555555555555
Q ss_pred ccccc
Q 041467 265 GNHLQ 269 (746)
Q Consensus 265 ~N~l~ 269 (746)
+|+|+
T Consensus 89 ~N~l~ 93 (156)
T d2ifga3 89 FNALE 93 (156)
T ss_dssp SSCCS
T ss_pred CCCCc
Confidence 55554
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=4.8e-11 Score=108.49 Aligned_cols=87 Identities=16% Similarity=0.173 Sum_probs=44.2
Q ss_pred cCCCCCcEeeCccC-cccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhh
Q 041467 126 SNASSLEMIEFSRN-QFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIA 204 (746)
Q Consensus 126 ~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 204 (746)
+.+++|++|++++| .|+.+.+.+|.++++|+.|+|++|+|+.+ .+.+|..+++|++|+|++|+|+ .+|....
T Consensus 28 ~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i------~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~ 100 (156)
T d2ifga3 28 PGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFV------APDAFHFTPRLSRLNLSFNALE-SLSWKTV 100 (156)
T ss_dssp CSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEE------CTTGGGSCSCCCEEECCSSCCS-CCCSTTT
T ss_pred cCccccCeeecCCCccccccCchhhccccccCcceeeccccCCc------ccccccccccccceeccCCCCc-ccChhhh
Confidence 34455555555443 35555555555555555555555555541 2334555555555555555555 3333322
Q ss_pred hcccccceEEcccCcc
Q 041467 205 NLSSTIKQIAMGSNRI 220 (746)
Q Consensus 205 ~l~~~L~~L~l~~N~i 220 (746)
... .|+.|+|++|.+
T Consensus 101 ~~~-~l~~L~L~~Np~ 115 (156)
T d2ifga3 101 QGL-SLQELVLSGNPL 115 (156)
T ss_dssp CSC-CCCEEECCSSCC
T ss_pred ccc-cccccccCCCcc
Confidence 222 355555555554
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.45 E-value=1e-08 Score=93.36 Aligned_cols=102 Identities=15% Similarity=0.108 Sum_probs=50.5
Q ss_pred CcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhccccc
Q 041467 131 LEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTI 210 (746)
Q Consensus 131 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L 210 (746)
+..++..+|... .++..+..+++|++|+|++|+|+... .++..+..+++|+.|+|++|.++..-+-.+.... .|
T Consensus 44 ~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~----~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~-~L 117 (162)
T d1koha1 44 DVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLD----DMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KL 117 (162)
T ss_dssp CCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCS----GGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTC-CC
T ss_pred hhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCc----hhHHHHhhCCcccccccccCccccchhhhhhhcc-cc
Confidence 333444444332 33344455666666777777665422 1233445566666666666666532221222222 35
Q ss_pred ceEEcccCcccccCCc-------cccCCCCCCeee
Q 041467 211 KQIAMGSNRISSTIPH-------GIRNLVNLNWLT 238 (746)
Q Consensus 211 ~~L~l~~N~i~~~~p~-------~~~~l~~L~~L~ 238 (746)
+.|++++|.++..... .+..+++|+.||
T Consensus 118 ~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 118 EELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp SSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred ceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 6666666666543322 134455555554
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.28 E-value=4.4e-08 Score=89.01 Aligned_cols=82 Identities=21% Similarity=0.118 Sum_probs=46.5
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCcc--CCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCA--IPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
+..|++.++... .++..+..+++|++|+||+|+|+.. ++..+..+++|+.|+|++|.+....+-......+|+.|++
T Consensus 44 ~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L 122 (162)
T d1koha1 44 DVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWL 122 (162)
T ss_dssp CCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCC
T ss_pred hhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeec
Confidence 344444444433 4455555667777777777777643 2334556677777777777765433323334445677776
Q ss_pred cCCCC
Q 041467 98 DCGGR 102 (746)
Q Consensus 98 ~~~~~ 102 (746)
++|..
T Consensus 123 ~~Npl 127 (162)
T d1koha1 123 DGNSL 127 (162)
T ss_dssp TTSTT
T ss_pred CCCCc
Confidence 66543
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.11 E-value=1.1e-06 Score=86.43 Aligned_cols=142 Identities=16% Similarity=0.107 Sum_probs=96.0
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccc
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~l 545 (746)
++....+.|+..+..+-++.+.||+ +.+|+...........+.+|+.+++.+. +=-+.++++++...+..++
T Consensus 8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~l 87 (263)
T d1j7la_ 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHHTTSEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhhhceEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEE
Confidence 3444445555443322233467886 6677765444334445788988887774 3235677888888888899
Q ss_pred hhhhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------
Q 041467 546 DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQ----------------------------------------- 584 (746)
Q Consensus 546 v~e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~----------------------------------------- 584 (746)
||+++++..+.....+......++.++++.++.||+...
T Consensus 88 v~~~l~G~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T d1j7la_ 88 LMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp EEECCSSEEHHHHTTTCSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSH
T ss_pred EEEecccccccccccccccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHH
Confidence 999998877653333444455567777778888875321
Q ss_pred ---------------CCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 585 ---------------PSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 585 ---------------~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
+.++|+|+.|.||++++++..-|.||+.+..
T Consensus 168 ~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence 1378999999999999776677999998764
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.52 E-value=1.8e-05 Score=71.56 Aligned_cols=47 Identities=9% Similarity=0.027 Sum_probs=24.2
Q ss_pred ccCCCCCCEEEccCCCCCCCCCC-CccccccccCCCCCCEEEcccccc
Q 041467 149 FSRLKNLSWLNLGVNNLGSGTAN-ELDFINLLTNCSKLERLYFNRNGF 195 (746)
Q Consensus 149 ~~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~~~~~l~~L~~L~Ls~N~l 195 (746)
+...++|++|+|++|.+...... ...+...+...++|+.|+++.+..
T Consensus 96 L~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 96 TLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp TTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCc
Confidence 33445566666666554331110 012344455567778887776643
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.41 E-value=4.1e-05 Score=69.11 Aligned_cols=86 Identities=10% Similarity=0.038 Sum_probs=44.7
Q ss_pred CCCCCEEeccCC-Ccc---------cccCCCCCcEeeCccCcccccCC----ccccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 109 LKSLLLLSLAFN-QFL---------SLSNASSLEMIEFSRNQFSGGVS----VDFSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 109 l~~L~~L~Ls~N-~l~---------~l~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
.++|+.|+|+++ .+. .+...+.|+.|+|++|.+..... ..+...+.|+.|+|++|.++... ...
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g--~~~ 91 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL--LAR 91 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH--HHH
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHH--HHH
Confidence 355666666543 341 23455666677777666653211 12334466667777666665311 011
Q ss_pred ccccccCCCCCCEEEccccccc
Q 041467 175 FINLLTNCSKLERLYFNRNGFE 196 (746)
Q Consensus 175 ~~~~~~~l~~L~~L~Ls~N~l~ 196 (746)
+...+...++|++|++++|.+.
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSC
T ss_pred HHHHHHhCCcCCEEECCCCcCC
Confidence 2334555566666666666543
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.31 E-value=7.6e-05 Score=72.32 Aligned_cols=123 Identities=15% Similarity=0.109 Sum_probs=78.8
Q ss_pred eEeecCC-eeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCC--CceeeEEEEEecCCcccchhhhccCCcc
Q 041467 487 KIREGGF-NIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRH--RNLIKIITICSSIDFEGFDFKAISNGQL 555 (746)
Q Consensus 487 ~ig~g~~-g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~H--pnIv~l~~~~~~~~~~~lv~e~~~~g~l 555 (746)
.+..|.. +.||+ +.+|..... ....+.+|++.++.+.. --+.++++++.+.+..++||+++++..+
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~---~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~ 93 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 93 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCcc---CHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence 4444543 56786 456654322 23347788888877753 2356778888888888999999987665
Q ss_pred cccCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------------------
Q 041467 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHC---------------------------------------------------- 583 (746)
Q Consensus 556 ~~~~l~~~~~~~i~~~i~~~l~yLH~~~---------------------------------------------------- 583 (746)
........+ .+.++++.++-||+..
T Consensus 94 ~~~~~~~~~---~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 170 (255)
T d1nd4a_ 94 LSSHLAPAE---KVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMP 170 (255)
T ss_dssp TTSCCCHHH---HHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCC
T ss_pred ccccccHHH---HHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhCC
Confidence 433233222 2234444444444211
Q ss_pred ---CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 584 ---QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 584 ---~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.+.++|+|+.|.||+++++..+-|+||+.+..
T Consensus 171 ~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~ 205 (255)
T d1nd4a_ 171 DGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 205 (255)
T ss_dssp SSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence 12379999999999999876678999998754
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.89 E-value=0.00011 Score=66.15 Aligned_cols=19 Identities=16% Similarity=0.230 Sum_probs=11.0
Q ss_pred ccccCCCCCCEEEcccccc
Q 041467 177 NLLTNCSKLERLYFNRNGF 195 (746)
Q Consensus 177 ~~~~~l~~L~~L~Ls~N~l 195 (746)
..+...++|+.|+++.+..
T Consensus 126 ~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 126 NMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHHHHCSSCCEEECCCSSH
T ss_pred HHHHhCCCcCEEeCcCCCC
Confidence 3444566666666665543
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.63 E-value=0.00044 Score=61.91 Aligned_cols=92 Identities=11% Similarity=0.120 Sum_probs=49.9
Q ss_pred CCCCCcEeeCccCcccccCC----ccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEc--ccccccc---
Q 041467 127 NASSLEMIEFSRNQFSGGVS----VDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYF--NRNGFEG--- 197 (746)
Q Consensus 127 ~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~L--s~N~l~~--- 197 (746)
..+.|+.|+|++|.++...- ..+...++++.+++++|.++... ...+...+...++|+.++| ++|.+..
T Consensus 44 ~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g--~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~ 121 (166)
T d1io0a_ 44 TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG--ILALVEALQSNTSLIELRIDNQSQPLGNNVE 121 (166)
T ss_dssp TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH--HHHHHHGGGGCSSCCEEECCCCSSCCCHHHH
T ss_pred cCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchh--HHHHHHHHHhCccccEEeeccCCCcCcHHHH
Confidence 44555555555555542211 12334566777777766664311 0123345666777877555 4556642
Q ss_pred -cCChhhhhcccccceEEcccCccc
Q 041467 198 -VLPHSIANLSSTIKQIAMGSNRIS 221 (746)
Q Consensus 198 -~~p~~~~~l~~~L~~L~l~~N~i~ 221 (746)
.+...+...+ .|+.|+++.+...
T Consensus 122 ~~La~~L~~n~-~L~~L~l~~~~~~ 145 (166)
T d1io0a_ 122 MEIANMLEKNT-TLLKFGYHFTQQG 145 (166)
T ss_dssp HHHHHHHHHCS-SCCEEECCCSSHH
T ss_pred HHHHHHHHhCC-CcCEEeCcCCCCc
Confidence 2334444554 7999998877543
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=96.08 E-value=0.0031 Score=64.80 Aligned_cols=29 Identities=31% Similarity=0.529 Sum_probs=25.2
Q ss_pred CeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 586 ~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.++|+|+.|.|||++++ .++|.||-.|..
T Consensus 224 ~LiHGDl~~gNIlv~~~-~~~vID~E~a~~ 252 (392)
T d2pula1 224 TLIHGDLHTGSIFASEH-ETKVIDPEFAFY 252 (392)
T ss_dssp EEECSCCCGGGEEECSS-CEEECCCTTCEE
T ss_pred ceeccCCcCCceeEcCC-ceEEechhhccc
Confidence 68999999999999876 489999988754
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.58 E-value=0.024 Score=55.77 Aligned_cols=31 Identities=23% Similarity=0.305 Sum_probs=27.5
Q ss_pred CCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 585 ~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.++||+|+.+.||+++++...-|.||+.|..
T Consensus 183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLGDELSGLIDFYFACN 213 (316)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cccccCCcchhhhhcccccceeEeccccccc
Confidence 4799999999999999887778999998753
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=93.31 E-value=0.045 Score=55.73 Aligned_cols=65 Identities=20% Similarity=0.162 Sum_probs=38.7
Q ss_pred CCeEeecCCeeEEEEEee----------------hhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchh
Q 041467 485 ANKIREGGFNIVYNVAMK----------------VANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 485 ~~~ig~g~~g~v~~vavK----------------~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.+.|+-|-.-.+|+|..+ +.. .........+|.++++.+. +.=..++++++.. +.|+
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g--~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~ 120 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF--NPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 120 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC--SCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC--CcchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence 346666777788875432 111 1112234568998888886 4334477777643 5788
Q ss_pred hhccCCcc
Q 041467 548 KAISNGQL 555 (746)
Q Consensus 548 e~~~~g~l 555 (746)
||+++..+
T Consensus 121 efi~g~~l 128 (395)
T d1nw1a_ 121 EYIPSRPL 128 (395)
T ss_dssp CCCCEEEC
T ss_pred EEeccccC
Confidence 88866444
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=93.25 E-value=0.078 Score=52.24 Aligned_cols=29 Identities=31% Similarity=0.310 Sum_probs=23.7
Q ss_pred CCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 585 ~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.+++|+|+.|.|||++++ ..+.||+-+..
T Consensus 192 ~~liHgDlh~~NvL~~~~--~~~IDFdd~~~ 220 (325)
T d1zyla1 192 VLRLHGDCHAGNILWRDG--PMFVDLDDARN 220 (325)
T ss_dssp CEECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred ceeecCCCCcccEEEeCC--ceEEechhccc
Confidence 478999999999999743 45899988753
|