Citrus Sinensis ID: 041554

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-----

MAILPCFSIFCSLILLLSMKVLLAADTVTPASFIRDGEKLVSFSQRFELGFFSPGKSKSRYLGIWFRQVSDTVVWVANRDRPISDHNAVLTVSNNGNLVLLNQKNGTIWSTNVFSEVKNPVAQLRDDGNLVIRDNSSANTTESYLWQSFDYPTDTLLQDMKMGWDLKNRLERYLSSWQSDDDPSPGKFTSRLEIQVLTKMCTFNGSVKFTCSGQWNDQAGFVSAISYTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLNPSGLLTRQIWNENSNGWDWDVLFSFPDEYCGKYGYCGANTICSPDQKPVCECLEGFKLKSKVNQTGPIKCERSHSSECIRGEQFIKLDNIRAPDFIEVSLNQSMNLQQCAAECLKNCSCRAYANSNVTEGSGCLMWFGDLLDASWPRRNFTGQSVYLRVPASETGTIFAFLKLM

cccHHHHHHHHHHHHHHHHcccccccccccccccccccEEEccccEEEEEccccccccccEEEEEcccccccEEEEccccccccccccEEEEEccccEEEEcccccEEEcccccccccccEEEEEccccEEEEEcccccccccEEEEcccccccccccccccccEEcccccEEEEEcccccccccccEEEEEEEccccEEEEEEccEEEEEEcccccccccccccccccccEEEEEEEcccEEEEEEEEccccEEEEEEEcccccEEEEEEEcccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccEEEcccccccccccEEEEccccHHHHHHHHHcccccccEEcccccccccEEEEcccccccccccccccccEEEEEcccccccccccccccc

ccHHHHHHHHHHHHHccccEEEEEcccccccEEEccccEEEccccEEEEEEEcccccccEEEEEEEEEcccEEEEEEEcccccccccEEEEEccccEEEEEEccccEEEEcccccccccHHHHEcccccEEEEEcccccccccEEEEccccccccccccccccccccccccHHEEccccccccccccEEEEEccccccEEEEEcccEEEEEcccccccccccccccccccEEEEEEEEcccEEEEEEEEEcccEEEEEEEccccEEEEEEEccccccEEEEEEEEccccccccHcHcccccEEccccccccccccccccccccccccccccEEccEccccccccEEEEccccccccccEEEEccccHHHHHHHHHHccccEEEEccccccccEEEEEEccHHHHHHcccccccccEEEEEEHHHHHHccccccEc

MAILPCFSIFCSLILLLSMKVLLAadtvtpasfirdgekLVSFSQRfelgffspgksksrylGIWFRQVSDTVVWVanrdrpisdhnavltvsnngnlvllnqkngtiwstnvfsevknpvaqlrddgnlvirdnssanttesylwqsfdyptdtllQDMKMGWDLKNRLERYLSswqsdddpspgkftsRLEIQVLTKMCtfngsvkftcsgqwndqaGFVSAISYTNFLYKQFLVENQDeisywyepynrpsimtlklnpsglltRQIWnensngwdwdvlfsfpdeycgkygycganticspdqkpvceclegfklkskvnqtgpikcershssecirgeqfikldnirapdfIEVSLNQSMNLQQCAAECLKncscrayansnvtegsgclmwfgdlldaswprrnftgqsvylrvpasetgTIFAFLKLM

MAILPCFSIFCSLILLLSMKVLLAADTVTPASFIRDGEKLVSFSQRFELGffspgksksrylGIWFRQVSDTVVWVANRDRPISDHNAVLTVSNNGNLVLLNQKNGTIWSTNVFSEVKNPvaqlrddgnlvirdnssanttesylwqSFDYPTDTLLQDMKMGWDLKNRLERYLSswqsdddpspgkFTSRLEIQVLTKMCTFNGSVKFTCSGQWNDQAGFVSAISYTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLNPSGLLTRQIWNENSNGWDWDVLFSFPDEYCGKYGYCGANTICSPDQKPVCECLEGFKLkskvnqtgpikcershssecirgeQFIKLDNIRAPDFIEVSLNQSMNLQQCAAECLKNCSCRAYANSNVTEGSGCLMWFGDLLDASWPRRNFTGqsvylrvpasetgTIFAFLKLM

MAILPcfsifcslilllsmkvllAADTVTPASFIRDGEKLVSFSQRFELGFFSPGKSKSRYLGIWFRQVSDTVVWVANRDRPISDHNAVLTVSNNGNLVLLNQKNGTIWSTNVFSEVKNPVAQLRDDGNLVIRDNSSANTTESYLWQSFDYPTDTLLQDMKMGWDLKNRLERYLSSWQSDDDPSPGKFTSRLEIQVLTKMCTFNGSVKFTCSGQWNDQAGFVSAISYTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLNPSGLLTRQIWNENSNGWDWDVLFSFPDEYCGKYGYCGANTICSPDQKPVCECLEGFKLKSKVNQTGPIKCERSHSSECIRGEQFIKLDNIRAPDFIEVSLNQSMNLQQCAAECLKNCSCRAYANSNVTEGSGCLMWFGDLLDASWPRRNFTGQSVYLRVPASETGTIFAFLKLM

**ILPCFSIFCSLILLLSMKVLLAADTVTPASFIRDGEKLVSFSQRFELGFFSPGKSKSRYLGIWFRQVSDTVVWVANRDRPISDHNAVLTVSNNGNLVLLNQKNGTIWSTNVFSEVKNPVAQLRDDGNLVIRDNSSANTTESYLWQSFDYPTDTLLQDMKMGWDLKNRLERYLSSW**********FTSRLEIQVLTKMCTFNGSVKFTCSGQWNDQAGFVSAISYTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLNPSGLLTRQIWNENSNGWDWDVLFSFPDEYCGKYGYCGANTICSPDQKPVCECLEGFKLKSKVNQTGPIKCERSHSSECIRGEQFIKLDNIRAPDFIEVSLNQSMNLQQCAAECLKNCSCRAYANSNVTEGSGCLMWFGDLLDASWPRRNFTGQSVYLRVPASETGTIFAFLK**

**ILPCFSIFCSLILLLSMKVLLAADTVTPASFIRDGEKLVSFSQRFELGFFSPGKSKSRYLGIWFRQVSDTVVWVANRDRPISDHNAVLTVSNNGNLVLLNQKNGTIWSTNVFSEVKNPVAQLRDDGNLVIRDNSSANTTESYLWQSFDYPTDTLLQDMKMGWDLKNRLERYLSSWQSDDDPSPGKFTSRLEIQVLTKMCTFNGSVKFTCSGQWNDQAGFVSAISYTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLNPSGLLTRQIWNENSNGWDWDVLFSFPDEYCGKYGYCGANTICSPDQKPVCECLEGFKLKSKVNQTGPIKCERSHSSECIRGEQFIKLDNIRAPDFIEVSLNQSMNLQQCAAECLKNCSCRAYANSNVTEGSGCLMWFGDLLDASWPRRNFTGQSVYLRVPASETGTIFAFLKLM

MAILPCFSIFCSLILLLSMKVLLAADTVTPASFIRDGEKLVSFSQRFELGFFSPGKSKSRYLGIWFRQVSDTVVWVANRDRPISDHNAVLTVSNNGNLVLLNQKNGTIWSTNVFSEVKNPVAQLRDDGNLVIRDNSSANTTESYLWQSFDYPTDTLLQDMKMGWDLKNRLERYLS***********KFTSRLEIQVLTKMCTFNGSVKFTCSGQWNDQAGFVSAISYTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLNPSGLLTRQIWNENSNGWDWDVLFSFPDEYCGKYGYCGANTICSPDQKPVCECLEGFKLKSKVNQTGPIKCERSHSSECIRGEQFIKLDNIRAPDFIEVSLNQSMNLQQCAAECLKNCSCRAYANSNVTEGSGCLMWFGDLLDASWPRRNFTGQSVYLRVPASETGTIFAFLKLM

*AILPCFSIFCSLILLLSMKVLLAADTVTPASFIRDGEKLVSFSQRFELGFFSPGKSKSRYLGIWFRQVSDTVVWVANRDRPISDHNAVLTVSNNGNLVLLNQKNGTIWSTNVFSEVKNPVAQLRDDGNLVIRDNSSANTTESYLWQSFDYPTDTLLQDMKMGWDLKNRLERYLSSWQSDDDPSPGKFTSRLEIQVLTKMCTFNGSVKFTCSGQWNDQAGFVSAISYTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLNPSGLLTRQIWNENSNGWDWDVLFSFPDEYCGKYGYCGANTICSPDQKPVCECLEGFKLKSKVNQTGPIKCERSHSSECIRGEQFIKLDNIRAPDFIEVSLNQSMNLQQCAAECLKNCSCRAYANSNVTEGSGCLMWFGDLLDASWPRRNFTGQSVYLRVPASETGTIF******

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iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		435	2.2.26 [Sep-21-2011]
O81832		783	G-type lectin S-receptor-	yes	no	0.944	0.524	0.356	3e-71
P17840		435	S-locus-specific glycopro	N/A	no	0.912	0.912	0.375	4e-68
O81905		850	Receptor-like serine/thre	no	no	0.898	0.46	0.369	7e-68
Q9S972		847	Receptor-like serine/thre	no	no	0.875	0.449	0.382	9e-68
P07761		436	S-locus-specific glycopro	N/A	no	0.898	0.896	0.362	5e-64
Q9ZT07		833	G-type lectin S-receptor-	no	no	0.896	0.468	0.359	3e-63
Q39086		843	Receptor-like serine/thre	no	no	0.878	0.453	0.355	4e-63
P0DH86		853	G-type lectin S-receptor-	no	no	0.908	0.463	0.349	4e-62
P0DH87		546	Putative inactive G-type	no	no	0.908	0.723	0.349	4e-62
Q9LPZ3		845	G-type lectin S-receptor-	no	no	0.894	0.460	0.354	1e-61

>sp\|O81832\|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4	Back alignment and function desciption

 Score =  269 bits (688), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 156/437 (35%), Positives = 250/437 (57%), Gaps = 26/437 (5%)

Query: 4   LPCFSIFCSLILLLSMKVLLAADTVTPASFIRDGEKLVSFSQRFELGFFSPGKSKSRYLG 63
           L   S+F +++L  +  +L+A  T      ++DG+ +VS    FE+GFFSPG S++RYLG
Sbjct: 9   LLIISLFSTILLAQATDILIANQT------LKDGDTIVSQGGSFEVGFFSPGGSRNRYLG 62

Query: 64  IWFRQVS-DTVVWVANRDRPISDHNAVLTVSNNGNLVLLNQKNGTIWSTNVF-----SEV 117
           IW++++S  TVVWVANRD P+ D +  L VS NG+L L N +N  IWS++       + +
Sbjct: 63  IWYKKISLQTVVWVANRDSPLYDLSGTLKVSENGSLCLFNDRNHIIWSSSSSPSSQKASL 122

Query: 118 KNPVAQLRDDGNLVIRDNSSANTTESYLWQSFDYPTDTLLQDMKMGWDLKNRLERYLSSW 177
           +NP+ Q+ D GNLV+R+   +   + Y+WQS DYP D  L  MK G +    L R+L+SW
Sbjct: 123 RNPIVQILDTGNLVVRN---SGDDQDYIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLTSW 179

Query: 178 QSDDDPSPGKFTSRLEIQVLTKMCTFNGSVKFTCSGQWNDQAGFVSAISYTNFLYKQFLV 237
           ++ DDPS G +T++++   + +      SV    +G WN            N +Y+   V
Sbjct: 180 RAIDDPSTGNYTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLRFTGMPNLKPNPIYRYEYV 239

Query: 238 ENQDEISYWYEPYNRPSIMT-LKLNPSGLLTRQIWNENSNGWDWDVLFSFPDEYCGKYGY 296
             ++E+ Y Y+  N PS++T ++LNP+G L R  W +N   W++    S   + C +Y  
Sbjct: 240 FTEEEVYYTYKLEN-PSVLTRMQLNPNGALQRYTWVDNLQSWNF--YLSAMMDSCDQYTL 296

Query: 297 CGANTICSPDQKPVCECLEGFKLKSK---VNQTGPIKCERSHSSECIRGEQ-FIKLDNIR 352
           CG+   C+ ++ P C CL+GF  K+    V       C R    +C +GE  F+K+  ++
Sbjct: 297 CGSYGSCNINESPACRCLKGFVAKTPQAWVAGDWSEGCVRRVKLDCGKGEDGFLKISKLK 356

Query: 353 APDFIEVSLNQSMNLQQCAAECLKNCSCRAYANSNVTEGS-GCLMWFGDLLDASWPRRNF 411
            PD      +++M+L +C   CL+NC+C AY+  ++ +G  GC++WFGDL+D      N 
Sbjct: 357 LPDTRTSWYDKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIR--EYNE 414

Query: 412 TGQSVYLRVPASETGTI 428
            GQ +Y+R+ +SE  T+
Sbjct: 415 NGQDLYVRLASSEIETL 431

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp\|P17840\|SLSG3_BRAOL S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2	Back alignment and function description

>sp\|O81905\|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1	Back alignment and function description

>sp\|Q9S972\|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2	Back alignment and function description

>sp\|P07761\|SLSG6_BRAOL S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2	Back alignment and function description

>sp\|Q9ZT07\|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3	Back alignment and function description

>sp\|Q39086\|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1	Back alignment and function description

>sp\|P0DH86\|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1	Back alignment and function description

>sp\|P0DH87\|PSRK_ARATH Putative inactive G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=PSEUDOSRKA PE=5 SV=1	Back alignment and function description

>sp\|Q9LPZ3\|Y1141_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana GN=At1g11410 PE=3 SV=3	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		435
224115098		802	predicted protein [Populus trichocarpa]	0.965	0.523	0.484	1e-105
147856585		741	hypothetical protein VITISV_033399 [Viti	0.949	0.557	0.441	1e-90
359493711		1081	PREDICTED: G-type lectin S-receptor-like	0.910	0.366	0.452	1e-90
359493736		822	PREDICTED: G-type lectin S-receptor-like	0.970	0.513	0.417	5e-84
359493740		2422	PREDICTED: uncharacterized protein LOC10	0.912	0.163	0.433	7e-84
359493727		1767	PREDICTED: uncharacterized protein LOC10	0.963	0.237	0.419	1e-83
302143151		817	unnamed protein product [Vitis vinifera]	0.956	0.509	0.419	2e-83
356514933		828	PREDICTED: G-type lectin S-receptor-like	0.951	0.5	0.413	6e-83
255587574		500	S-locus-specific glycoprotein S6 precurs	0.935	0.814	0.397	1e-82
359493717		641	PREDICTED: G-type lectin S-receptor-like	0.921	0.625	0.426	2e-82

>gi\|224115098\|ref\|XP_002316939.1\| predicted protein [Populus trichocarpa] gi\|222860004\|gb\|EEE97551.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/433 (48%), Positives = 275/433 (63%), Gaps = 13/433 (3%)

Query: 1   MAILPCFSIFCSLILLLSMKVL-LAADTVTPASFIRDGEKLVSFSQRFELGFFSPGKSKS 59
           M  LP F IF S + + S+  L  +AD +TP   ++DG+ L+S SQ FELGFFSPG SK 
Sbjct: 1   MESLPFF-IFFSTLFIQSLHFLSFSADIITPDLPVKDGQTLISVSQSFELGFFSPGTSKY 59

Query: 60  RYLGIWFRQVSDTVVWVANRDRPISDHNAVLTVSNNGNLVLLNQKNGTIWSTNVFSEVKN 119
           RY+GIW+++  +TVVWVANR+ P++DH  VLT+ N GNLVLL+Q    IWS+N  S +  
Sbjct: 60  RYVGIWYKKSPETVVWVANRNNPLTDHFGVLTIDNRGNLVLLDQIKNIIWSSNSSSIIAG 119

Query: 120 PVAQLRDDGNLVIRDNSSANTTESYLWQSFDYPTDTLLQDMKMGWDLKNRLERYLSSWQS 179
           PVAQL D GNLV+RDN S+  TESY WQSFD P+DTLL  MK+GW+LK   ERYL +W+S
Sbjct: 120 PVAQLLDSGNLVVRDNGSSRNTESYRWQSFDQPSDTLLPGMKLGWNLKTGQERYLITWRS 179

Query: 180 DDDPSPGKFTSRLEIQVLTKMCTFNGSVKFTCSGQWNDQAGFVSAISYTNFLYKQFLVEN 239
             DPSPG FT RL+I  L ++    GSVK   SG WN    F       N +++  LV N
Sbjct: 180 ISDPSPGDFTYRLDIHGLPQLFIVVGSVKKVRSGPWNG-IFFGGTPKVHNSVFEPILVRN 238

Query: 240 QDEISYWYEPYNRPSIMTLKLNPSGLLTRQIWNENSNGWDWDVLFSFPDEYCGKYGYCGA 299
           +DEI Y Y   N      L LN SG + R +    ++G  W  ++S P + C  YG CGA
Sbjct: 239 EDEIYYTYRLLNNSVCSRLTLNQSGAVERLVMYGQNSG--WTTIYSVPVDTCENYGQCGA 296

Query: 300 NTICSPDQKPVCECLEGFKLKSK-----VNQTGPIKCERSHSSECIRGEQFIKLDNIRAP 354
           N IC     P+CECL+GFK   +      N  G  KCE   + +C  GE F+KL  ++ P
Sbjct: 297 NGICRTRTSPICECLKGFKSIPEEELDIQNFYGSRKCETRLTLDCQSGEGFLKLPGVKLP 356

Query: 355 DFIEVSLNQSMNLQQCAAECLKNCSCRAYANSNVT---EGSGCLMWFGDLLDASWPRRNF 411
           D +E  LN+SMNL++C AEC KNCSC A+A +N++   +GSGCLMWFG+L+D      + 
Sbjct: 357 DLLEFRLNESMNLKECEAECFKNCSCSAFATTNLSGGGDGSGCLMWFGNLIDIREQSGST 416

Query: 412 TGQSVYLRVPASE 424
            GQ +++RVPASE
Sbjct: 417 IGQDIHIRVPASE 429

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|147856585\|emb\|CAN80325.1\| hypothetical protein VITISV_033399 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359493711\|ref\|XP_002281022.2\| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359493736\|ref\|XP_002280506.2\| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359493740\|ref\|XP_002280379.2\| PREDICTED: uncharacterized protein LOC100262430 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359493727\|ref\|XP_002280656.2\| PREDICTED: uncharacterized protein LOC100243545 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|302143151\|emb\|CBI20446.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356514933\|ref\|XP_003526156.1\| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max]	Back alignment and taxonomy information

>gi\|255587574\|ref\|XP_002534317.1\| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] gi\|223525509\|gb\|EEF28066.1\| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|359493717\|ref\|XP_002280926.2\| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		435
TAIR\|locus:2131684		783	AT4G27290 [Arabidopsis thalian	0.910	0.505	0.370	6.7e-72
TAIR\|locus:2018506		847	RK2 "receptor kinase 2" [Arabi	0.880	0.452	0.381	6.1e-71
TAIR\|locus:2141181		850	RK3 "receptor kinase 3" [Arabi	0.868	0.444	0.375	1.8e-69
TAIR\|locus:2018546		843	RK1 "receptor kinase 1" [Arabi	0.878	0.453	0.357	1.5e-65
TAIR\|locus:2059103		828	AT2G19130 [Arabidopsis thalian	0.912	0.479	0.354	6e-64
TAIR\|locus:2141176		849	B120 [Arabidopsis thaliana (ta	0.891	0.457	0.356	3.1e-60
TAIR\|locus:2131694		815	AT4G27300 [Arabidopsis thalian	0.878	0.468	0.349	1.3e-59
TAIR\|locus:2200888		804	AT1G61500 [Arabidopsis thalian	0.862	0.466	0.355	1.1e-57
TAIR\|locus:2088619		439	AT3G12000 [Arabidopsis thalian	0.829	0.822	0.357	2.2e-57
TAIR\|locus:2197709		809	AT1G61480 [Arabidopsis thalian	0.871	0.468	0.350	1.1e-55

TAIR\|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 155/418 (37%), Positives = 243/418 (58%)

Query:    24 AADTVTPASFIRDGEKLVSFSQRFELGFFSPGKSKSRYLGIWFRQVS-DTVVWVANRDRP 82
             A D +     ++DG+ +VS    FE+GFFSPG S++RYLGIW++++S  TVVWVANRD P
Sbjct:    23 ATDILIANQTLKDGDTIVSQGGSFEVGFFSPGGSRNRYLGIWYKKISLQTVVWVANRDSP 82

Query:    83 ISDHNAVLTVSNNGNLVLLNQKNGTIWSTNVF-----SEVKNPVAQLRDDGNLVIRDNSS 137
             + D +  L VS NG+L L N +N  IWS++       + ++NP+ Q+ D GNLV+R NS 
Sbjct:    83 LYDLSGTLKVSENGSLCLFNDRNHIIWSSSSSPSSQKASLRNPIVQILDTGNLVVR-NSG 141

Query:   138 ANTTESYLWQSFDYPTDTLLQDMKMGWDLKNRLERYLSSWQSDDDPSPGKFTSRLEIQVL 197
              +  + Y+WQS DYP D  L  MK G +    L R+L+SW++ DDPS G +T++++   +
Sbjct:   142 DD--QDYIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLTSWRAIDDPSTGNYTNKMDPNGV 199

Query:   198 TKMCTFNGSVKFTCSGQWNDQAGFVSAISYT-NFLYKQFLVENQDEISYWYEPYNRPSIM 256
              +      SV    +G WN    F    +   N +Y+   V  ++E+ Y Y+  N PS++
Sbjct:   200 PQFFLKKNSVVVFRTGPWNGLR-FTGMPNLKPNPIYRYEYVFTEEEVYYTYKLEN-PSVL 257

Query:   257 T-LKLNPSGLLTRQIWNENSNGWDWDVLFSFPDEYCGKYGYCGANTICSPDQKPVCECLE 315
             T ++LNP+G L R  W +N   W++  L +  D  C +Y  CG+   C+ ++ P C CL+
Sbjct:   258 TRMQLNPNGALQRYTWVDNLQSWNF-YLSAMMDS-CDQYTLCGSYGSCNINESPACRCLK 315

Query:   316 GFKLKSK---VNQTGPIKCERSHSSECIRGEQ-FIKLDNIRAPDFIEVSLNQSMNLQQCA 371
             GF  K+    V       C R    +C +GE  F+K+  ++ PD      +++M+L +C 
Sbjct:   316 GFVAKTPQAWVAGDWSEGCVRRVKLDCGKGEDGFLKISKLKLPDTRTSWYDKNMDLNECK 375

Query:   372 AECLKNCSCRAYANSNVTEGS-GCLMWFGDLLDASWPRRNFTGQSVYLRVPASETGTI 428
               CL+NC+C AY+  ++ +G  GC++WFGDL+D      N  GQ +Y+R+ +SE  T+
Sbjct:   376 KVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIR--EYNENGQDLYVRLASSEIETL 431

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR\|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2200888 AT1G61500 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2088619 AT3G12000 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2197709 AT1G61480 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_LG_XI001046	hypothetical protein (802 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		435
pfam01453		109	pfam01453, B_lectin, D-mannose binding lectin	6e-39
cd00028		116	cd00028, B_lectin, Bulb-type mannose-specific lect	1e-37
smart00108		114	smart00108, B_lectin, Bulb-type mannose-specific l	9e-35
pfam08276		66	pfam08276, PAN_2, PAN-like domain	4e-24
pfam00954		110	pfam00954, S_locus_glycop, S-locus glycoprotein fa	7e-17
cd01098		84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	5e-16
smart00473		78	smart00473, PAN_AP, divergent subfamily of APPLE d	5e-07
PTZ00163		230	PTZ00163, PTZ00163, hypothetical protein; Provisio	0.001

>gnl\|CDD\|216511 pfam01453, B_lectin, D-mannose binding lectin	Back alignment and domain information

 Score =  135 bits (342), Expect = 6e-39
 Identities = 53/115 (46%), Positives = 72/115 (62%), Gaps = 6/115 (5%)

Query: 70  SDTVVWVANRDRPISDHNAVLTVSNNGNLVLLNQKNGTIWSTNVFSEVKNPVAQLRDDGN 129
           + TVVWVANR  P++D +  L + ++GNLVL +     +WS+N   +    VA L+DDGN
Sbjct: 1   NQTVVWVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSGCVAVLQDDGN 60

Query: 130 LVIRDNSSANTTESYLWQSFDYPTDTLLQDMKMGWDLKNRLERYLSSWQSDDDPS 184
           LV+ DNS        LWQSFD+PTDTLL   K G ++     R L+SW+S+ DPS
Sbjct: 61  LVLYDNSG-----KVLWQSFDHPTDTLLPGQKDG-NVVIGGSRRLTSWKSNTDPS 109

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl\|CDD\|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin	Back alignment and domain information

>gnl\|CDD\|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin	Back alignment and domain information

>gnl\|CDD\|219774 pfam08276, PAN_2, PAN-like domain	Back alignment and domain information

>gnl\|CDD\|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family	Back alignment and domain information

>gnl\|CDD\|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins	Back alignment and domain information

>gnl\|CDD\|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains	Back alignment and domain information

>gnl\|CDD\|185490 PTZ00163, PTZ00163, hypothetical protein; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		435
PF01453		114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.96
PF00954		110	S_locus_glycop: S-locus glycoprotein family; Inter	99.95
cd00028		116	B_lectin Bulb-type mannose-specific lectin. The do	99.93
smart00108		114	B_lectin Bulb-type mannose-specific lectin.	99.91
PF08276		66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.7
cd00129		80	PAN_APPLE PAN/APPLE-like domain; present in N-term	99.51
cd01098		84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.5
smart00108		114	B_lectin Bulb-type mannose-specific lectin.	98.85
cd00028		116	B_lectin Bulb-type mannose-specific lectin. The do	98.74
smart00473		78	PAN_AP divergent subfamily of APPLE domains. Apple	98.54
PF01453		114	B_lectin: D-mannose binding lectin; InterPro: IPR0	98.53
cd01100		73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	97.52
PF00024		79	PAN_1: PAN domain This Prosite entry concerns appl	93.67
PF14295		51	PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A.	90.01
smart00223		79	APPLE APPLE domain. Four-fold repeat in plasma kal	88.86
PF08277		71	PAN_3: PAN-like domain; InterPro: IPR006583 PAN do	86.29
smart00605		94	CW CW domain.	86.13
PF07645		42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	83.91
cd00053		36	EGF Epidermal growth factor domain, found in epide	83.0

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Back alignment and domain information

Probab=99.96  E-value=5e-30  Score=218.10  Aligned_cols=109  Identities=47%  Similarity=0.761  Sum_probs=80.4

Q ss_pred             CcEEEEcCCCCCCCCC--CcEEEEeeCCcEEEEeCCCceEEee-cccCCC-CCcEEEEecCCCEEEEeCCCCCCCcceEe
Q 041554           71 DTVVWVANRDRPISDH--NAVLTVSNNGNLVLLNQKNGTIWST-NVFSEV-KNPVAQLRDDGNLVIRDNSSANTTESYLW  146 (435)
Q Consensus        71 ~~~VW~Anr~~pv~~~--~~~l~l~~dG~Lvl~d~~~~~vWst-~~~~~~-~~~~~~L~d~GNLVl~~~~~~~~~~~~~W  146 (435)
                      +|+||+|||+.|+...  ..+|.|+.||+|+|++..+..+|++ ++.+.. .+..|+|+|+|||||++..     +++||
T Consensus         2 ~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~-----~~~lW   76 (114)
T PF01453_consen    2 RTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSS-----GNVLW   76 (114)
T ss_dssp             --------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETT-----SEEEE
T ss_pred             cccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeec-----ceEEE
Confidence            6899999999999532  4789999999999999999999999 555433 4689999999999999965     58999


Q ss_pred             eeccCCCccccCCceeeeeccCCCeeEEEEecCCCCCC
Q 041554          147 QSFDYPTDTLLQDMKMGWDLKNRLERYLSSWQSDDDPS  184 (435)
Q Consensus       147 qSFD~PTDTLLpgq~l~~~~~tg~~~~L~Sw~s~~dps  184 (435)
                      |||||||||+||||+|+.+..+|.+..|+||++.+|||
T Consensus        77 ~Sf~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   77 QSFDYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             ESTTSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             eecCCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            99999999999999999877777666799999999996

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation	Back alignment and domain information

>cd00028 B_lectin Bulb-type mannose-specific lectin	Back alignment and domain information

>smart00108 B_lectin Bulb-type mannose-specific lectin	Back alignment and domain information

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []	Back alignment and domain information

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins	Back alignment and domain information

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins	Back alignment and domain information

>smart00108 B_lectin Bulb-type mannose-specific lectin	Back alignment and domain information

>cd00028 B_lectin Bulb-type mannose-specific lectin	Back alignment and domain information

>smart00473 PAN_AP divergent subfamily of APPLE domains	Back alignment and domain information

Back alignment and domain information

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins	Back alignment and domain information

>PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []	Back alignment and domain information

>PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A	Back alignment and domain information

>smart00223 APPLE APPLE domain	Back alignment and domain information

>PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []	Back alignment and domain information

>smart00605 CW CW domain	Back alignment and domain information

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins	Back alignment and domain information

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		435
1kj1_A		109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	4e-13
1xd5_A		112	Gastrodianin-1, antifungal protein GAFP-1; monocot	2e-11
1xd5_A		112	Gastrodianin-1, antifungal protein GAFP-1; monocot	6e-06
3a0c_A		110	Mannose/sialic acid-binding lectin; beta-prism II,	4e-11
2dpf_A		115	Curculin; sweet taste, taste modifying, plant prot	7e-11
1b2p_A		119	Protein (lectin); mannose-binding lectin, monocot,	3e-10
1b2p_A		119	Protein (lectin); mannose-binding lectin, monocot,	1e-07
3dzw_A		109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	5e-10
3r0e_A		109	Lectin; carbohydrate binding, carbohydrate, sugar	4e-09
3r0e_B		110	Lectin; carbohydrate binding, carbohydrate, sugar	6e-09
3mez_B		113	Mannose-specific lectin 3 chain 2; heterotetramer,	3e-08
1dlp_A		236	Lectin scafet precursor; two-domain lectin, beta p	3e-07
1dlp_A		236	Lectin scafet precursor; two-domain lectin, beta p	7e-05
3mez_A		111	Mannose-specific lectin 3 chain 1; heterotetramer,	5e-06
3mez_A		111	Mannose-specific lectin 3 chain 1; heterotetramer,	4e-05

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109	Back alignment and structure

 Score = 64.5 bits (157), Expect = 4e-13
 Identities = 22/126 (17%), Positives = 48/126 (38%), Gaps = 19/126 (15%)

Query: 26  DTVTPASFIRDGEKLVSFSQRFELGFFSPGKSKSRYLGIWFRQVSDTVVWVANRDRPISD 85
           + +T    +  G+ L    + +              L ++      T VW +N       
Sbjct: 2   NLLTNGEGLYAGQSLDV--EPYHFIMQEDCN-----LVLYDH---STSVWASNTGIL-GK 50

Query: 86  HNAVLTVSNNGNLVLLNQKNGTIWSTNVFSEVKNPVAQLRDDGNLVIRDNSSANTTESYL 145
                 + ++GN V+ + +  ++W+++      N V  L++DGN+VI  +         +
Sbjct: 51  KGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD--------I 102

Query: 146 WQSFDY 151
           W +  Y
Sbjct: 103 WSTGTY 108

PyMOL of 1kj1

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112	Back alignment and structure

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112	Back alignment and structure

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110	Back alignment and structure

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115	Back alignment and structure

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119	Back alignment and structure

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119	Back alignment and structure

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109	Back alignment and structure

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109	Back alignment and structure

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110	Back alignment and structure

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113	Back alignment and structure

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236	Back alignment and structure

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236	Back alignment and structure

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111	Back alignment and structure

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		435
3m7h_A		276	Putidacin L1; monocot mannose-binding lectin, bact	100.0
1dlp_A		236	Lectin scafet precursor; two-domain lectin, beta p	100.0
4h3o_A		105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.88
3a0c_A		110	Mannose/sialic acid-binding lectin; beta-prism II,	99.85
1b2p_A		119	Protein (lectin); mannose-binding lectin, monocot,	99.84
1xd5_A		112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.82
2dpf_A		115	Curculin; sweet taste, taste modifying, plant prot	99.82
3dzw_A		109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.78
3r0e_B		110	Lectin; carbohydrate binding, carbohydrate, sugar	99.74
3mez_B		113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.74
1xd5_A		112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.72
3r0e_A		109	Lectin; carbohydrate binding, carbohydrate, sugar	99.7
3a0c_A		110	Mannose/sialic acid-binding lectin; beta-prism II,	99.69
1b2p_A		119	Protein (lectin); mannose-binding lectin, monocot,	99.65
2dpf_A		115	Curculin; sweet taste, taste modifying, plant prot	99.64
3mez_A		111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.6
3mez_B		113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.48
3m7h_A		276	Putidacin L1; monocot mannose-binding lectin, bact	99.4
3mez_A		111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.39
3dzw_A		109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.34
3r0e_B		110	Lectin; carbohydrate binding, carbohydrate, sugar	99.32
3r0e_A		109	Lectin; carbohydrate binding, carbohydrate, sugar	99.28
4h3o_A		105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.18
1dlp_A		236	Lectin scafet precursor; two-domain lectin, beta p	98.95
2ll3_A		82	Micronemal protein 4; cell adhesion; NMR {Toxoplas	91.24
3no2_A		276	Uncharacterized protein; six-bladed beta-propeller	83.43
3no2_A		276	Uncharacterized protein; six-bladed beta-propeller	81.05

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*	Back alignment and structure

Probab=100.00  E-value=2.7e-44  Score=349.83  Aligned_cols=231  Identities=17%  Similarity=0.140  Sum_probs=178.7

Q ss_pred             ccccceeCCCCcccCCCeEEecCCeEEEEEeCCCCCCceEEEEEEecCC-CcEEEEcCCCCCCCCC----CcEEEEeeCC
Q 041554           22 LLAADTVTPASFIRDGEKLVSFSQRFELGFFSPGKSKSRYLGIWFRQVS-DTVVWVANRDRPISDH----NAVLTVSNNG   96 (435)
Q Consensus        22 ~~~~~~l~~g~~l~~~~~L~S~~g~F~lgF~~~~~~~~~yl~iw~~~~~-~~~VW~Anr~~pv~~~----~~~l~l~~dG   96 (435)
                      +++.|+|.+|++|.+|++|+|++|.|+||||.++   ++||   |+  + + +||+|||+.|+.++    +++|+|+.||
T Consensus        11 ~~~~~~l~~g~~l~~~~~l~S~~g~F~lgf~~~~---~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G   81 (276)
T 3m7h_A           11 GVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDG---NLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLAFYV   81 (276)
T ss_dssp             CTTSSEECTTEEBCTTCEEECTTSSEEEEECTTS---CEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSEEEE
T ss_pred             cccCCEecCCCEecCCCEEEcCCCcEEEEEECCC---CeEE---EC--CCC-eEEECCCCCCcCCcccccceEEEEeCCC
Confidence            5678999999999999999999999999999543   4666   66  6 6 99999999999864    6789999999


Q ss_pred             cEEE--EeCCCceEEeecccCC-----CCCcEEEEecCCCEEEEeCCCCCCCcceEeeeccCCCccccCCceeeeeccCC
Q 041554           97 NLVL--LNQKNGTIWSTNVFSE-----VKNPVAQLRDDGNLVIRDNSSANTTESYLWQSFDYPTDTLLQDMKMGWDLKNR  169 (435)
Q Consensus        97 ~Lvl--~d~~~~~vWst~~~~~-----~~~~~~~L~d~GNLVl~~~~~~~~~~~~~WqSFD~PTDTLLpgq~l~~~~~tg  169 (435)
                      +|||  .|++|.+||++++...     ..+..|+|+|+|||||++ .      .+||||  ||||||||||+|+.++++|
T Consensus        82 ~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~-~------~~lWqS--~ptdtlLpg~~~~~~l~~g  152 (276)
T 3m7h_A           82 QYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD-S------LALWNG--TPAIPLVPGAIDSLLLAPG  152 (276)
T ss_dssp             SSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE-E------EEEEES--CTTSCCCCSCTTCEEECSS
T ss_pred             cEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC-C------ceeeCc--ccccccccccccccccccC
Confidence            9999  7888999999997642     124689999999999998 2      799999  9999999999999999888


Q ss_pred             CeeEEEEecCCCCCCCceeEEeeeccceeEEEEec-CCeeeEEecCCCCCcceEEeeeccceeeEEEEEEeCC-eEEEEE
Q 041554          170 LERYLSSWQSDDDPSPGKFTSRLEIQVLTKMCTFN-GSVKFTCSGQWNDQAGFVSAISYTNFLYKQFLVENQD-EISYWY  247 (435)
Q Consensus       170 ~~~~L~Sw~s~~dps~G~fsl~l~~~g~~~l~~~~-~~~~yw~sg~w~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  247 (435)
                        +.|   ++.+||++|.|+++|+++|..  ++++ +..+||++|+|++.... -.+. .  .-.+.+..+++ .+..++
T Consensus       153 --~~L---~S~~dps~G~fsl~l~~dGnl--vLy~~~~~~yW~Sgt~~~~~~~-l~l~-~--dGnLvl~d~~~~~vWsS~  221 (276)
T 3m7h_A          153 --SEL---VQGVVYGAGASKLVFQGDGNL--VAYGPNGAATWNAGTQGKGAVR-AVFQ-G--DGNLVVYGAGNAVLWHSH  221 (276)
T ss_dssp             --EEE---CTTCEEEETTEEEEECTTSCE--EEECTTSSEEEECCCTTTTCCE-EEEC-T--TSCEEEECTTSCEEEECS
T ss_pred             --ccc---ccCCCCCCceEEEeecCCceE--EEEeCCCeEEEECCCCCCccEE-EEEc-C--CCeEEEEeCCCcEEEEec
Confidence              567   568899999999999999964  4455 46899999998764322 1121 1  11233344433 333222


Q ss_pred             EecCCCcEEEEEEccCCcEEEEeecCCCCCcceEEEEeeeC
Q 041554          248 EPYNRPSIMTLKLNPSGLLTRQIWNENSNGWDWDVLFSFPD  288 (435)
Q Consensus       248 ~~~~~~~~~rl~L~~dG~lr~y~w~~~~~~~~W~~~~~~p~  288 (435)
                        ......+|++|+.||+|++|.|   ...  |..++..|.
T Consensus       222 --t~~~~~~rl~Ld~dGnLvly~~---~~~--Wqsf~~~P~  255 (276)
T 3m7h_A          222 --TGGHASAVLRLQANGSIAILDE---KPV--WARFGFQPT  255 (276)
T ss_dssp             --CTTCTTCEEEECTTSCEEEEEE---EEE--EESSSCCTT
T ss_pred             --CCCCCCEEEEEcCCccEEEEcC---CCe--EEccCccCC
Confidence              2222347999999999999998   122  766665553

PyMOL of 3m7h

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1	Back alignment and structure

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*	Back alignment and structure

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*	Back alignment and structure

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1	Back alignment and structure

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A	Back alignment and structure

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*	Back alignment and structure

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*	Back alignment and structure

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}	Back alignment and structure

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0	Back alignment and structure

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A	Back alignment and structure

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}	Back alignment and structure

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*	Back alignment and structure

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1	Back alignment and structure

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*	Back alignment and structure

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0	Back alignment and structure

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0	Back alignment and structure

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*	Back alignment and structure

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0	Back alignment and structure

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*	Back alignment and structure

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}	Back alignment and structure

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}	Back alignment and structure

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*	Back alignment and structure

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1	Back alignment and structure

>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*	Back alignment and structure

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}	Back alignment and structure

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		435
d1kj1a_		109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	3e-21
d1dlpa2		120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	9e-15
d1dlpa2		120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	5e-09
d1jpca_		108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	3e-14
d1jpca_		108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	3e-04
d1xd5a_		112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	4e-13
d1b2pa_		119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	3e-12
d1dlpa1		115	b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p	5e-09

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109	Back information, alignment and structure


class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 86.2 bits (213), Expect = 3e-21
 Identities = 23/118 (19%), Positives = 50/118 (42%), Gaps = 13/118 (11%)

Query: 34  IRDGEKLVSFSQRFELGFFSPGKSKSRYLGIWFRQVSDTVVWVANRDRPISDHNAVLTVS 93
           + +GE L +  Q  ++  +     +   L ++      T VW +N             + 
Sbjct: 4   LTNGEGLYA-GQSLDVEPYHFIMQEDCNLVLYDH---STSVWASNTGILG-KKGCKAVLQ 58

Query: 94  NNGNLVLLNQKNGTIWSTNVFSEVKNPVAQLRDDGNLVIRDNSSANTTESYLWQSFDY 151
           ++GN V+ + +  ++W+++      N V  L++DGN+VI  +         +W +  Y
Sbjct: 59  SDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD--------IWSTGTY 108

PyMOL of d1kj1a_

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120	Back information, alignment and structure

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120	Back information, alignment and structure

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108	Back information, alignment and structure

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108	Back information, alignment and structure

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112	Back information, alignment and structure

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119	Back information, alignment and structure

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		435
d1xd5a_		112	Gastrodianin (antifungal protein) {Gastrodia elata	99.88
d1jpca_		108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.86
d1kj1a_		109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.86
d1dlpa2		120	Fetuin-binding protein Scafet precursor {Bluebell	99.71
d1b2pa_		119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.69
d1dlpa1		115	Fetuin-binding protein Scafet precursor {Bluebell	99.6
d1dlpa1		115	Fetuin-binding protein Scafet precursor {Bluebell	99.56
d1dlpa2		120	Fetuin-binding protein Scafet precursor {Bluebell	99.36
d1b2pa_		119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.31
d1jpca_		108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.22
d1kj1a_		109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.17
d1xd5a_		112	Gastrodianin (antifungal protein) {Gastrodia elata	99.05
d1emoa2		39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	90.79
d2vj3a1		42	Neurogenic locus notch homolog protein 1, Notch1 {	88.46
d1xkba1		39	Factor X, N-terminal module {Human (Homo sapiens)	87.51
d2qj2a1		91	Hepatocyte growth factor {Human (Homo sapiens) [Ta	87.22
d1emoa1		43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	83.27
d1i0ua2		41	Low density lipoprotein (LDL) receptor, different	81.52
d2vj3a2		39	Neurogenic locus notch homolog protein 1, Notch1 {	81.28

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}	Back information, alignment and structure

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.88  E-value=1.9e-22  Score=167.92  Aligned_cols=112  Identities=24%  Similarity=0.419  Sum_probs=94.4

Q ss_pred             cceeCCCCcccCCCeEEecCCeEEEEEeCCCCCCceEEEEEEecCCCcEEEEcCCCCCCCCCCcEEEEeeCCcEEEEeCC
Q 041554           25 ADTVTPASFIRDGEKLVSFSQRFELGFFSPGKSKSRYLGIWFRQVSDTVVWVANRDRPISDHNAVLTVSNNGNLVLLNQK  104 (435)
Q Consensus        25 ~~~l~~g~~l~~~~~L~S~~g~F~lgF~~~~~~~~~yl~iw~~~~~~~~VW~Anr~~pv~~~~~~l~l~~dG~Lvl~d~~  104 (435)
                      +|+|.+||.|..|++|+|  |.|+|.||.+++     |.|++.   .++||.|+++.+..  .+.|.|+.||+|||+|. 
T Consensus         1 tDtL~~gq~L~~g~~l~~--g~~~l~~q~DGN-----Lvly~~---~~~vW~s~~~~~~~--~~~l~l~~dGnLvl~~~-   67 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCN-----LVLYDN---NRAVWASGTNGKAS--GCVLKMQNDGNLVIYSG-   67 (112)
T ss_dssp             CCEEETTEEECTTCEEEE--TTEEEEECTTSC-----EEEEET---TEEEEECCCTTSCS--SEEEEECTTSCEEEEET-
T ss_pred             CCEecCCCEecCCCEEEE--CCEEEEEcCCCC-----EEEEcC---CcEEEEccCccCCC--CcEEEEeccccEEEEec-
Confidence            589999999999999975  999999998876     556543   78999999998743  56899999999999986 


Q ss_pred             CceEEeecccCCCCCcEEEEecCCCEEEEeCCCCCCCcceEeeeccCCCc
Q 041554          105 NGTIWSTNVFSEVKNPVAQLRDDGNLVIRDNSSANTTESYLWQSFDYPTD  154 (435)
Q Consensus       105 ~~~vWst~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~~~WqSFD~PTD  154 (435)
                      +.++|++++........|+|+|+|||||++.+     ++++|||+.||++
T Consensus        68 ~~~~w~s~t~~~~~~~~l~L~ddGNlvly~~~-----~~~~W~S~t~~~n  112 (112)
T d1xd5a_          68 SRAIWASNTNRQNGNYYLILQRDRNVVIYDNS-----NNAIWATHTNVGN  112 (112)
T ss_dssp             TEEEEECCCCCSCCCCEEEECTTSCEEEECTT-----SCEEEECCCCCCC
T ss_pred             CCeEEEEeeccCCCceEEEEcCCCCEEEECCC-----CcEEecCCCccCC
Confidence            56788877665444578999999999999875     5799999999975

PyMOL of d1xd5a_

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}	Back information, alignment and structure

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}	Back information, alignment and structure

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}	Back information, alignment and structure

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}	Back information, alignment and structure

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}	Back information, alignment and structure

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2qj2a1 g.10.1.1 (A:36-126) Hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure