Citrus Sinensis ID: 041590

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490---
MAGFITLQHIDIPKHNNFSPNYTLDTRPSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECTSSSDLAAEMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCLSCWFTWMIDYILGNNPQKMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVAALVALSGKKSTGGIDKSTIFTEVPLMFPAP
cccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcHHHHHHHHHHHccccccccccccccccccccccccc
cccHHHHHHHHHHHccccccccccccccccccEEEcccccccccccccHHHcccccccEcccccccEEHHHHHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHcccccccHHHHHHHHHHHHHHHccHHHHHHHHcccHHcccccccccccccEccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcHEHHHHcccccccccccccccEEEEccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHccccccEEcccccccccHHHccccccccccEccccccccccccccccHHHHEccHHHHHHHHHHHHHHHHccccccccccccccccccccccc
magfitlqhidipkhnnfspnytldtrpscssmpndgdscltdgkfdssgitndllggyydagdaikfhfpasfnmtMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGvgdisggnkipndlycwirpegidydrpvqectssSDLAAEMAAASIVFKDNEEYSKKLIHSAIMIFKFSrqyrgrysaggveagwfynsrsywdeftwSGAWLYYATGNSSYLKLVTTtglgkqagifrgildnsllswdnmpaGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMcsylpnfsswnatkAKLSFSFYRRLIQlnhgrpqplqyVTNAAFLASLFSNCLSCWFTWMIDYIlgnnpqkmsylvgfgspypqyvhhrgasipknkikysckrgwkwrdsskpnpntlvgamvagphkhdgfhdvrsnynytvptlhdnAGLVAALVALSgkkstggidkstiftevplmfpap
MAGFITLqhidipkhnnFSPNYTLDTRPSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGvgdisggnkiPNDLYCWIRPEGIDYDRPVQECTSSSDLAAEMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCLSCWFTWMIDYILGNNPQKMSYLVGFGSPYPQYVHhrgasipknkiKYSCKRGwkwrdsskpnPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVAALVALSgkkstggidkstiftevplmfpap
MAGFITLQHIDIPKHNNFSPNYTLDTRPSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECTSSSDLAAEMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTAlllsrlrlllnlGYPYDEMLRAFHNQTAITMCSYLPNFSSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCLSCWFTWMIDYILGNNPQKMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGlvaalvalSGKKSTGGIDKSTIFTEVPLMFPAP
***FITLQHIDI********************************KFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECTS**DLAAEMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCLSCWFTWMIDYILGNNPQKMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRD*******TLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVAALVALSGKKSTGGIDKSTIFTEVP******
*AGFITLQHIDIPKHNNFSPNYTLDTRPSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECTSSSDLAAEMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCLSCWFTWMIDYILGNNPQKMSYLVGFGSPYPQYVHHRG****KNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVAALVALSGKK*********************
MAGFITLQHIDIPKHNNFSPNYTLDTRPSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECTSSSDLAAEMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCLSCWFTWMIDYILGNNPQKMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVAALVALSGKKSTGGIDKSTIFTEVPLMFPAP
MAGFITLQHIDIPKHNNFSPNYTLDTRPSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECTSSSDLAAEMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCLSCWFTWMIDYILGNNPQKMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVAALVALSGKKST*******************
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MAGFITLQHIDIPKHNNFSPNYTLDTRPSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECTSSSDLAAEMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCLSCWFTWMIDYILGNNPQKMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVAALVALSGKKSTGGIDKSTIFTEVPLMFPAP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query493 2.2.26 [Sep-21-2011]
Q38890621 Endoglucanase 25 OS=Arabi yes no 0.969 0.769 0.570 1e-156
P0C1U4619 Endoglucanase 9 OS=Oryza yes no 0.890 0.709 0.605 1e-152
Q84R49620 Endoglucanase 10 OS=Oryza no no 0.890 0.708 0.584 1e-147
Q9STW8620 Endoglucanase 21 OS=Arabi no no 0.894 0.711 0.570 1e-140
Q7XUK4623 Endoglucanase 12 OS=Oryza no no 0.890 0.704 0.511 1e-130
O04478623 Endoglucanase 7 OS=Arabid no no 0.880 0.696 0.489 1e-121
P05522494 Endoglucanase 1 OS=Persea N/A no 0.807 0.805 0.378 4e-65
Q5Z9P8518 Endoglucanase 18 OS=Oryza no no 0.813 0.774 0.377 6e-63
O81416516 Endoglucanase 17 OS=Arabi no no 0.811 0.775 0.387 6e-62
Q8LCP6525 Endoglucanase 10 OS=Arabi no no 0.839 0.788 0.358 1e-61
>sp|Q38890|GUN25_ARATH Endoglucanase 25 OS=Arabidopsis thaliana GN=KOR PE=1 SV=1 Back     alignment and function desciption
 Score =  551 bits (1421), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 302/529 (57%), Positives = 366/529 (69%), Gaps = 51/529 (9%)

Query: 1   MAGFITLQHIDIPKHNNFSP---NYTLDTR--------------PSCSSMPNDGDSCLTD 43
           +AGFITL    +P+H+  +P   NYT+                 P  +++   G+S L D
Sbjct: 85  LAGFITLIVKTVPRHHPKTPPPDNYTIALHKALKFFNAQKSGKLPKHNNVSWRGNSGLQD 144

Query: 44  GKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGELNHVKEII 103
           GK ++     DL+GGYYDAGDAIKF+FP ++ MTMLSWSVIEY AKYEAAGEL HVKE+I
Sbjct: 145 GKGETGSFYKDLVGGYYDAGDAIKFNFPMAYAMTMLSWSVIEYSAKYEAAGELTHVKELI 204

Query: 104 KWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECTS 163
           KWGTDY LKTFN +ADSI  +++QVG G+   GN  PND YCW+RPE +DY RPV  C  
Sbjct: 205 KWGTDYFLKTFNSTADSIDDLVSQVGSGNTDDGNTDPNDHYCWMRPEDMDYKRPVTTCNG 264

Query: 164 SSD-----LAAEMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYN 218
                   +AA +A+ASIVFKDN+EYSKKL+H A ++++F R  RGRYSAG  E+  FYN
Sbjct: 265 GCSDLAAEMAAALASASIVFKDNKEYSKKLVHGAKVVYQFGRTRRGRYSAGTAESSKFYN 324

Query: 219 SRSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTAL 278
           S  YWDEF W GAW+YYATGN +YL L+T   + K AG F G     + SWDN  AG  L
Sbjct: 325 SSMYWDEFIWGGAWMYYATGNVTYLNLITQPTMAKHAGAFWGGPYYGVFSWDNKLAGAQL 384

Query: 279 LLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSSWNATKAKLSFSFYRRLIQLNH 338
           LLSRLRL L+ GYPY+E+LR FHNQT+I MCSYLP F+ +N T           LI+LNH
Sbjct: 385 LLSRLRLFLSPGYPYEEILRTFHNQTSIVMCSYLPIFNKFNRTNGG--------LIELNH 436

Query: 339 GRPQPLQYVTNAAFLASLFSNCLSC-----WFTW---------------MIDYILGNNPQ 378
           G PQPLQY  NAAFLA+L+S+ L       W+                  IDYILG NP+
Sbjct: 437 GAPQPLQYSVNAAFLATLYSDYLDAADTPGWYCGPNFYSTSVLRDFARSQIDYILGKNPR 496

Query: 379 KMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKH 438
           KMSY+VGFG+ YP++VHHRGASIPKNK+KY+CK GWKWRDS KPNPNT+ GAMVAGP K 
Sbjct: 497 KMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKR 556

Query: 439 DGFHDVRSNYNYTVPTLHDNAGLVAALVALSG-KKSTGGIDKSTIFTEV 486
           DG+ DVR NYNYT PTL  NAGLVAALVALSG +++TG IDK+TIF+ V
Sbjct: 557 DGYRDVRMNYNYTEPTLAGNAGLVAALVALSGEEEATGKIDKNTIFSAV 605
Required for cellulose microfibrils formation. Involved in cell wall assembly during cell elongation and cell plate maturation in cytokinesis. Required for secondary cell wall formation in the developing xylem. May cycle through different intracellular compartments, including plasma membrane.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|P0C1U4|GUN9_ORYSJ Endoglucanase 9 OS=Oryza sativa subsp. japonica GN=GLU1 PE=2 SV=1 Back     alignment and function description
>sp|Q84R49|GUN10_ORYSJ Endoglucanase 10 OS=Oryza sativa subsp. japonica GN=GLU2 PE=2 SV=1 Back     alignment and function description
>sp|Q9STW8|GUN21_ARATH Endoglucanase 21 OS=Arabidopsis thaliana GN=KOR3 PE=2 SV=1 Back     alignment and function description
>sp|Q7XUK4|GUN12_ORYSJ Endoglucanase 12 OS=Oryza sativa subsp. japonica GN=GLU3 PE=2 SV=2 Back     alignment and function description
>sp|O04478|GUN7_ARATH Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE=2 SV=1 Back     alignment and function description
>sp|P05522|GUN1_PERAE Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 SV=1 Back     alignment and function description
>sp|Q5Z9P8|GUN18_ORYSJ Endoglucanase 18 OS=Oryza sativa subsp. japonica GN=Os06g0715300 PE=2 SV=1 Back     alignment and function description
>sp|O81416|GUN17_ARATH Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1 Back     alignment and function description
>sp|Q8LCP6|GUN10_ARATH Endoglucanase 10 OS=Arabidopsis thaliana GN=At1g75680 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query493
347466705 610 endo-1,4-beta-glucanase [Populus tomento 0.967 0.781 0.638 1e-174
347466539 610 endo-1,4-beta-glucanase [Populus tomento 0.967 0.781 0.637 1e-174
347466653 610 endo-1,4-beta-glucanase [Populus tomento 0.967 0.781 0.637 1e-173
347466679 610 endo-1,4-beta-glucanase [Populus tomento 0.967 0.781 0.637 1e-173
347466651 610 endo-1,4-beta-glucanase [Populus tomento 0.967 0.781 0.635 1e-173
42765931 619 endo-1,4-beta-glucanase [Populus tremulo 0.967 0.770 0.628 1e-172
225469870 618 PREDICTED: endoglucanase 25 [Vitis vinif 0.914 0.729 0.659 1e-172
297739424501 unnamed protein product [Vitis vinifera] 0.914 0.900 0.659 1e-171
350535529 617 endo-1,4-beta-glucanase [Solanum lycoper 0.965 0.771 0.616 1e-171
284192447 619 membrane-bound endo-beta-1,4-glucanase [ 0.967 0.770 0.626 1e-171
>gi|347466705|gb|AEO97265.1| endo-1,4-beta-glucanase [Populus tomentosa] Back     alignment and taxonomy information
 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 331/518 (63%), Positives = 387/518 (74%), Gaps = 41/518 (7%)

Query: 1   MAGFITLQHIDIPKHNNF---SPNYTLDTR--------------PSCSSMPNDGDSCLTD 43
           + G ITL    +P+H++    + NYTL                 P  +++   G SCL+D
Sbjct: 86  LVGLITLIVKTVPRHHHSHAPADNYTLALHKALMFFNGQRSGKLPKHNNVSWRGSSCLSD 145

Query: 44  GKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGELNHVKEII 103
           GK        DL+GGYYDAGDAIKFHFPASF+MTMLSWSVIEY AKYEAAGELNHVKE+I
Sbjct: 146 GKGKQGSFYKDLVGGYYDAGDAIKFHFPASFSMTMLSWSVIEYSAKYEAAGELNHVKELI 205

Query: 104 KWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECTS 163
           KWG DY LKTFN SAD+I RI+AQVG GD SGG+  PND YCW+RPE IDYDRPV EC+S
Sbjct: 206 KWGADYFLKTFNSSADTIDRIVAQVGSGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSS 265

Query: 164 SSD----LAAEMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNS 219
            SD    +AA +A+ASIVFKDN+ YS+KL+H A  +FKF+R  RGRYSAGG EA  FYNS
Sbjct: 266 CSDLAAEMAAALASASIVFKDNKAYSQKLVHGAKTLFKFARDQRGRYSAGGSEAAIFYNS 325

Query: 220 RSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALL 279
            SYWDEF W GAWLYYATGN+SYL+L T  GL K AG F G  D  +LSWDN  AG  LL
Sbjct: 326 TSYWDEFIWGGAWLYYATGNNSYLQLATMPGLAKHAGAFWGGPDYGVLSWDNKLAGAQLL 385

Query: 280 LSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSSWNATKAKLSFSFYRRLIQLNHG 339
           LSRLRL L+ GYPY+E+LR FHNQT+I MCSYLP F+ +N TK          LI+LNHG
Sbjct: 386 LSRLRLFLSPGYPYEEILRTFHNQTSIIMCSYLPIFTKFNRTKGG--------LIELNHG 437

Query: 340 RPQPLQYVTNAAFLASLFSN-----------CLSCWFTWMIDYILGNNPQKMSYLVGFGS 388
           RPQPLQYV NAAFLA+LFS+           C   +++  IDYILG NP+KMSY+VGFG+
Sbjct: 438 RPQPLQYVVNAAFLATLFSDYLEAADTPGWYCGPNFYSTDIDYILGKNPRKMSYIVGFGN 497

Query: 389 PYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNY 448
            YP+++HHRGASIPKNKI+Y+CK GWKWRD+SKPNPNTLVGAMVAGP +HDGFHDVR+NY
Sbjct: 498 HYPKHLHHRGASIPKNKIRYNCKGGWKWRDTSKPNPNTLVGAMVAGPDRHDGFHDVRTNY 557

Query: 449 NYTVPTLHDNAGLVAALVALSGKKSTGGIDKSTIFTEV 486
           NYT PT+  NAGLVAALVALSG K+T GIDK+TIF+ V
Sbjct: 558 NYTEPTIAGNAGLVAALVALSGDKTT-GIDKNTIFSAV 594

Source: Populus tomentosa

Species: Populus tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|347466539|gb|AEO97182.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466593|gb|AEO97209.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466647|gb|AEO97236.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466649|gb|AEO97237.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466659|gb|AEO97242.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466667|gb|AEO97246.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466673|gb|AEO97249.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466681|gb|AEO97253.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466685|gb|AEO97255.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466689|gb|AEO97257.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466695|gb|AEO97260.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466697|gb|AEO97261.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466699|gb|AEO97262.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466703|gb|AEO97264.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466711|gb|AEO97268.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466717|gb|AEO97271.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466721|gb|AEO97273.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466723|gb|AEO97274.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|429326572|gb|AFZ78626.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|347466653|gb|AEO97239.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466655|gb|AEO97240.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466657|gb|AEO97241.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466661|gb|AEO97243.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466663|gb|AEO97244.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466665|gb|AEO97245.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466669|gb|AEO97247.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466671|gb|AEO97248.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466675|gb|AEO97250.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466677|gb|AEO97251.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466683|gb|AEO97254.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466687|gb|AEO97256.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466691|gb|AEO97258.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466693|gb|AEO97259.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466701|gb|AEO97263.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466707|gb|AEO97266.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466713|gb|AEO97269.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466715|gb|AEO97270.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466719|gb|AEO97272.1| endo-1,4-beta-glucanase [Populus tomentosa] Back     alignment and taxonomy information
>gi|347466679|gb|AEO97252.1| endo-1,4-beta-glucanase [Populus tomentosa] gi|347466709|gb|AEO97267.1| endo-1,4-beta-glucanase [Populus tomentosa] Back     alignment and taxonomy information
>gi|347466651|gb|AEO97238.1| endo-1,4-beta-glucanase [Populus tomentosa] Back     alignment and taxonomy information
>gi|42765931|gb|AAS45400.1| endo-1,4-beta-glucanase [Populus tremuloides] Back     alignment and taxonomy information
>gi|225469870|ref|XP_002269783.1| PREDICTED: endoglucanase 25 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297739424|emb|CBI29606.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|350535529|ref|NP_001233943.1| endo-1,4-beta-glucanase [Solanum lycopersicum] gi|2065531|gb|AAC49704.1| endo-1,4-beta-glucanase [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|284192447|gb|ADB82903.1| membrane-bound endo-beta-1,4-glucanase [Populus alba x Populus grandidentata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query493
TAIR|locus:2157022621 GH9A1 "glycosyl hydrolase 9A1" 0.910 0.723 0.583 1.7e-150
TAIR|locus:2135997620 GH9A3 "glycosyl hydrolase 9A3" 0.894 0.711 0.511 1.2e-121
TAIR|locus:2034158623 KOR2 "KORRIGAN 2" [Arabidopsis 0.904 0.715 0.415 2.8e-89
TAIR|locus:2059375525 GH9B8 "glycosyl hydrolase 9B8" 0.795 0.746 0.372 8.1e-60
TAIR|locus:2024670501 CEL2 "cellulase 2" [Arabidopsi 0.793 0.780 0.384 7.3e-59
TAIR|locus:2014205 620 GH9C2 "glycosyl hydrolase 9C2" 0.809 0.643 0.366 1.5e-58
TAIR|locus:2137824516 GH9B13 "glycosyl hydrolase 9B1 0.819 0.782 0.381 1.9e-58
TAIR|locus:2035384515 GH9B5 "glycosyl hydrolase 9B5" 0.805 0.770 0.352 3.2e-58
TAIR|locus:2005599525 GH9B7 "glycosyl hydrolase 9B7" 0.813 0.763 0.354 5.1e-58
TAIR|locus:2042451491 GH9B11 "glycosyl hydrolase 9B1 0.423 0.425 0.397 3.9e-57
TAIR|locus:2157022 GH9A1 "glycosyl hydrolase 9A1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1438 (511.3 bits), Expect = 1.7e-150, Sum P(2) = 1.7e-150
 Identities = 282/483 (58%), Positives = 334/483 (69%)

Query:    37 GDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGEL 96
             G+S L DGK ++     DL+GGYYDAGDAIKF+FP ++ MTMLSWSVIEY AKYEAAGEL
Sbjct:   138 GNSGLQDGKGETGSFYKDLVGGYYDAGDAIKFNFPMAYAMTMLSWSVIEYSAKYEAAGEL 197

Query:    97 NHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDR 156
              HVKE+IKWGTDY LKTFN +ADSI  +++QVG G+   GN  PND YCW+RPE +DY R
Sbjct:   198 THVKELIKWGTDYFLKTFNSTADSIDDLVSQVGSGNTDDGNTDPNDHYCWMRPEDMDYKR 257

Query:   157 PVQECTSS-SDLAAEMAAA----SIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGV 211
             PV  C    SDLAAEMAAA    SIVFKDN+EYSKKL+H A ++++F R  RGRYSAG  
Sbjct:   258 PVTTCNGGCSDLAAEMAAALASASIVFKDNKEYSKKLVHGAKVVYQFGRTRRGRYSAGTA 317

Query:   212 EAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDN 271
             E+  FYNS  YWDEF W GAW+YYATGN +YL L+T   + K AG F G     + SWDN
Sbjct:   318 ESSKFYNSSMYWDEFIWGGAWMYYATGNVTYLNLITQPTMAKHAGAFWGGPYYGVFSWDN 377

Query:   272 MPAGTAXXXXXXXXXXXXGYPYDEMLRAFHNQTAITMCSYLPNFSSWNATKAKLSFSFYR 331
               AG              GYPY+E+LR FHNQT+I MCSYLP F+ +N T   L      
Sbjct:   378 KLAGAQLLLSRLRLFLSPGYPYEEILRTFHNQTSIVMCSYLPIFNKFNRTNGGL------ 431

Query:   332 RLIQLNHGRPQPLQYVTNAAFLASLFSNCLSC-----WFTW---------------MIDY 371
               I+LNHG PQPLQY  NAAFLA+L+S+ L       W+                  IDY
Sbjct:   432 --IELNHGAPQPLQYSVNAAFLATLYSDYLDAADTPGWYCGPNFYSTSVLRDFARSQIDY 489

Query:   372 ILGNNPQKMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAM 431
             ILG NP+KMSY+VGFG+ YP++VHHRGASIPKNK+KY+CK GWKWRDS KPNPNT+ GAM
Sbjct:   490 ILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAM 549

Query:   432 VAGPHKHDGFHDVRSNYNYTVPTLHDNAGXXXXXXXXSGKK-STGGIDKSTIFTEVPLMF 490
             VAGP K DG+ DVR NYNYT PTL  NAG        SG++ +TG IDK+TIF+ VP +F
Sbjct:   550 VAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALVALSGEEEATGKIDKNTIFSAVPPLF 609

Query:   491 PAP 493
             P P
Sbjct:   610 PTP 612
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009504 "cell plate" evidence=IDA
GO:0009826 "unidimensional cell growth" evidence=IMP
GO:0009735 "response to cytokinin stimulus" evidence=IMP
GO:0048367 "shoot system development" evidence=IMP
GO:0030244 "cellulose biosynthetic process" evidence=RCA;IMP;TAS
GO:0005769 "early endosome" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0042538 "hyperosmotic salinity response" evidence=IMP
GO:0043622 "cortical microtubule organization" evidence=IMP
GO:0000271 "polysaccharide biosynthetic process" evidence=RCA
GO:0000902 "cell morphogenesis" evidence=RCA
GO:0006096 "glycolysis" evidence=RCA
GO:0006833 "water transport" evidence=RCA
GO:0006972 "hyperosmotic response" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0009266 "response to temperature stimulus" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009734 "auxin mediated signaling pathway" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
GO:0009825 "multidimensional cell growth" evidence=RCA
GO:0009832 "plant-type cell wall biogenesis" evidence=RCA
GO:0009932 "cell tip growth" evidence=RCA
GO:0010193 "response to ozone" evidence=RCA
GO:0010817 "regulation of hormone levels" evidence=RCA
GO:0016049 "cell growth" evidence=RCA
GO:0016051 "carbohydrate biosynthetic process" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
GO:0030243 "cellulose metabolic process" evidence=RCA
GO:0032880 "regulation of protein localization" evidence=RCA
GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA
GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA
GO:0046686 "response to cadmium ion" evidence=RCA
GO:0048193 "Golgi vesicle transport" evidence=RCA
GO:0048765 "root hair cell differentiation" evidence=RCA
GO:0048767 "root hair elongation" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
GO:0008810 "cellulase activity" evidence=ISS
TAIR|locus:2135997 GH9A3 "glycosyl hydrolase 9A3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034158 KOR2 "KORRIGAN 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059375 GH9B8 "glycosyl hydrolase 9B8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024670 CEL2 "cellulase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014205 GH9C2 "glycosyl hydrolase 9C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137824 GH9B13 "glycosyl hydrolase 9B13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035384 GH9B5 "glycosyl hydrolase 9B5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005599 GH9B7 "glycosyl hydrolase 9B7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042451 GH9B11 "glycosyl hydrolase 9B11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P0C1U4GUN9_ORYSJ3, ., 2, ., 1, ., 40.60540.89040.7092yesno
Q38890GUN25_ARATH3, ., 2, ., 1, ., 40.57080.96950.7697yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.914
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00011357001
SubName- Full=Chromosome undetermined scaffold_301, whole genome shotgun sequence; (618 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 1e-125
PLN02345469 PLN02345, PLN02345, endoglucanase 1e-111
PLN02266510 PLN02266, PLN02266, endoglucanase 2e-91
PLN02613498 PLN02613, PLN02613, endoglucanase 8e-88
PLN02340614 PLN02340, PLN02340, endoglucanase 1e-84
PLN02171 629 PLN02171, PLN02171, endoglucanase 1e-84
PLN02420525 PLN02420, PLN02420, endoglucanase 1e-84
PLN00119489 PLN00119, PLN00119, endoglucanase 4e-79
PLN02909486 PLN02909, PLN02909, Endoglucanase 4e-79
PLN02175484 PLN02175, PLN02175, endoglucanase 6e-76
PLN02308492 PLN02308, PLN02308, endoglucanase 3e-72
PLN03009495 PLN03009, PLN03009, cellulase 2e-68
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information 
 Score =  372 bits (957), Expect = e-125
 Identities = 178/450 (39%), Positives = 231/450 (51%), Gaps = 63/450 (14%)

Query: 37  GDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGEL 96
           GDS L+DG         DL GG+YDAGD +KF  P +   TML+WSV EY   YE+ G+L
Sbjct: 31  GDSGLSDGAPYGV----DLTGGWYDAGDHVKFGVPMAITTTMLAWSVYEYGKAYESGGQL 86

Query: 97  NHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDR 156
             + + I+W TDYLLK               V VGD   GN    D  CW RPE +   R
Sbjct: 87  PDLLDEIRWATDYLLKAHTAPNVLY------VQVGD---GNV---DHKCWGRPEDMPTAR 134

Query: 157 PVQECTS---SSDLAAE----MAAASIVFKD-NEEYSKKLIHSAIMIFKFSRQYRGRYSA 208
           PV +  +    SD+AAE    +AAASIVFKD +  Y+ KL+  A  ++ F+ +YRGRYS 
Sbjct: 135 PVYKIDASNPGSDVAAETAAALAAASIVFKDSDPTYAAKLLEHAKTLYAFADKYRGRYSD 194

Query: 209 GGV-EAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLL 267
                AG FYNS  Y DE  W+ AWLY ATG+++YL    + G    AG           
Sbjct: 195 SLYTAAGGFYNSSGYADELLWAAAWLYRATGDATYLNYAESNGASLGAGDQFDNGV---F 251

Query: 268 SWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPN-FSSWNATKAKLS 326
           SWDN  AG  LLL+++ L L      D   +++ +     +C +LP  +     T   L 
Sbjct: 252 SWDNKHAGAQLLLAKVTLGLP---GADVAKQSYKSAADRFLCYWLPGGYGQVQYTPGGLL 308

Query: 327 FSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCLSCWFT---------WMIDYILGNNP 377
           + +              LQYVTNAAFLA  +++ LS +             IDYILG+NP
Sbjct: 309 YLYQW----------GSLQYVTNAAFLALAYADYLSDFTGASKYRDFAKKQIDYILGDNP 358

Query: 378 QKMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGW-KWRDSSKPNPNTLVGAMVAGPH 436
            KMSY+VG+G   PQ  HHRGAS            GW     S  PNPN LVGA+V GP+
Sbjct: 359 LKMSYVVGYGENPPQRPHHRGAS-----------GGWSDSIPSPPPNPNVLVGALVGGPN 407

Query: 437 KHDGFHDVRSNYNYTVPTLHDNAGLVAALV 466
            +D + D RS+Y+      + NA LV AL 
Sbjct: 408 SNDCYTDDRSDYSTNEVATNWNAPLVGALA 437

Length = 437
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 493
PLN00119489 endoglucanase 100.0
PLN02340614 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02266510 endoglucanase 100.0
PLN02345469 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN02171 629 endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN03009495 cellulase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 96.34
KOG2787403 consensus Lanthionine synthetase C-like protein 1 95.44
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 93.6
COG1331667 Highly conserved protein containing a thioredoxin 92.61
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 92.34
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 87.34
>PLN00119 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=4.1e-110  Score=880.52  Aligned_cols=419  Identities=37%  Similarity=0.628  Sum_probs=376.3

Q ss_pred             CCCCCCCcccccC--------------CCCCCCCCccCCCCCCCCCCCCCccccccccccccCCCcccccchHHHHHHHH
Q 041590           15 HNNFSPNYTLDTR--------------PSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLS   80 (493)
Q Consensus        15 ~~~~~~~y~~al~--------------p~~~~~~Wr~~s~l~Dg~~~~~~~~~dlsGGWyDAGDy~Ky~~~~a~tv~~L~   80 (493)
                      ..+..+||++||+              |+++||+||++|++.||.+.    ++||+|||||||||+||++|+|+|+++|+
T Consensus        25 ~~~~~~nY~~aL~~sl~Ff~aQRsG~lp~~~r~~WRgds~~~dg~~~----~~DlsGGwyDAGD~~Kf~~p~a~s~t~L~  100 (489)
T PLN00119         25 RGAVSTNYGEALTKSLLYFEAQRSGKLPSNQRVTWRGDSALRDGSDA----HVDLTGGYYDAGDNMKFGFPLAFTTTMLA  100 (489)
T ss_pred             cccccccHHHHHHHHHHHhHhcCCCCCCccCCCCCcCcccccCCCCC----cccCCCCceeCCCCceeCcchHHHHHHHH
Confidence            4455579999999              89999999999999999776    99999999999999999999999999999


Q ss_pred             HHHHHhHHHHhhcCChHHHHHHHHHHHHHHhhccccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCccccc
Q 041590           81 WSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQE  160 (493)
Q Consensus        81 wa~~e~~~~~~~~~~~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~  160 (493)
                      |+++||++.|++.+++++||||||||+|||||||+.+    +.||+|||++..        ||.+|++||+++.+|++|.
T Consensus       101 w~~~ef~~~~~~~~~~~~~lde~kw~~Dyllk~~~~~----~~~y~qVgdg~~--------DH~~W~~Pe~~~~~R~~y~  168 (489)
T PLN00119        101 WSNIEMGSQLKAHHELGNALAALKWATDYLIKAHPQP----NVLYGQVGDGNS--------DHACWMRPEDMTTPRTSYR  168 (489)
T ss_pred             HHHHHhHHHHhcCCccHHHHHHHHHHHHHHHHhcCCC----CeEEEEeccCCC--------cccccCChhhCCCcCceee
Confidence            9999999999999999999999999999999999887    999999999987        9999999999999999998


Q ss_pred             cC---chHHH----HHHHHHhhcccc-CCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccccCCCCchhHHHHHHHH
Q 041590          161 CT---SSSDL----AAEMAAASIVFK-DNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAW  232 (493)
Q Consensus       161 ~~---~~~d~----Aa~~AaAs~v~k-~D~~yA~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~~~~De~~wAAae  232 (493)
                      ++   |++++    ||+||+|||||| +||+||++||++||++|+||+++|+.|..+.+..+++|+++++.||++|||+|
T Consensus       169 i~~~~pgSd~a~~~AAAlA~as~vfk~~D~~yA~~lL~~Ak~~y~fA~~~~g~y~~~~~~~~g~Y~ss~~~DEl~WAAaw  248 (489)
T PLN00119        169 IDAQHPGSDLAGETAAAMAAASIAFAPSDPAYASILIGHAKDLFEFAKAHPGLYQNSIPNAGGFYASSGYEDELLWAAAW  248 (489)
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCCCchhhHHHHHHHH
Confidence            86   77765    455555899999 99999999999999999999999999987766678899999999999999999


Q ss_pred             HHHHhCChhhHHHHHhcccCCccccccCcCCCCccCCCchHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHhhc
Q 041590          233 LYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYL  312 (493)
Q Consensus       233 Ly~ATGd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (493)
                      ||++|||++|+++++...   +  .   ......|+||+|..+++++|++++.  .+..+.++....|++.++.++|.++
T Consensus       249 LY~aTgd~~Yl~~~~~~~---~--~---~~~~~~f~Wd~k~~g~~vlLa~l~~--~~~~~~~~~~~~y~~~ae~~~~~~~  318 (489)
T PLN00119        249 LHRATNDQTYLDYLTQAS---N--T---GGPRTVFAWDDKFVGAQVLVAKLAL--EGKVESNGKIVEYKSMAEQFICNCA  318 (489)
T ss_pred             HHHHhCCHHHHHHHHhcc---c--c---CCCCcccChhhhHHHHHHHHHHHhc--cCCCcchHHHHHHHHHHHHHHHhhc
Confidence            999999999999988652   1  0   1123579999999999999998753  2234445556789999999999987


Q ss_pred             CCC-CCCccCCCCcchhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHHH-------------------HHHHHHhchhh
Q 041590          313 PNF-SSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCL-------------------SCWFTWMIDYI  372 (493)
Q Consensus       313 ~~~-~~~~~t~~G~~~~~y~~l~~~~~~~wgs~~~~~n~a~l~~~~~~~~-------------------~~~a~~qidYi  372 (493)
                      +.. ..+.+||+|        |+|++.  ||++||++|++||+++|++++                   ++||++|||||
T Consensus       319 ~~~~~~~~~TpgG--------l~~~~~--wg~~ry~~~~afla~~ya~yl~~~~~~~~c~~~~~~~~~~~~fA~~QidYi  388 (489)
T PLN00119        319 QKGSNNVKKTPGG--------LLWFLP--WNNLQYTTAASFVLSAYSKYLEAAKASIQCPNGALQASDLLQLARSQVDYI  388 (489)
T ss_pred             cCCCccceecCCe--------eEEecC--CccHHHHHHHHHHHHHHHHHHhhcccccccCCCCcCHHHHHHHHHHHHHHh
Confidence            642 346789999        888875  799999999999999999874                   35999999999


Q ss_pred             ccCCCCCCceEeeeCCCCCCCcccCCCCCCC---CcccccccCCcc-cccCCCCCCCCccceeecCCCCCCCcccccCcc
Q 041590          373 LGNNPQKMSYLVGFGSPYPQYVHHRGASIPK---NKIKYSCKRGWK-WRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNY  448 (493)
Q Consensus       373 LG~Np~~~SyV~G~G~~~p~~pHHR~s~~~~---~~~~~~c~~g~~-~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y  448 (493)
                      ||+||+++|||||||+|+|++||||++|||.   ++.+..|.+||. |.+++.||+++|.||||||||.+|+|.|+|.+|
T Consensus       389 LG~NP~~~SYvVGyG~n~P~~pHHR~as~~~~~~~~~~~~c~~g~~~~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~~y  468 (489)
T PLN00119        389 LGSNPKNMSYMVGYGTNYPKKPHHRGASIVSIKKDKTPVTCSGGFDAWYNNPAPNPNVLMGAIVGGPDDNDVYGDERSNF  468 (489)
T ss_pred             cCCCCCCCceEeecCCCCCCccccccCCCCccccCCcccCCCCCccccccCCCCCcceecceeecCCCCCCCcCcccccc
Confidence            9999999999999999999999999999984   456789999996 889999999999999999999999999999999


Q ss_pred             cccccccccchHHHHHHHHhh
Q 041590          449 NYTVPTLHDNAGLVAALVALS  469 (493)
Q Consensus       449 ~~NEvaId~NA~lv~~la~l~  469 (493)
                      ++|||||||||+||++||+|.
T Consensus       469 ~~nEva~dyNA~~vgalA~l~  489 (489)
T PLN00119        469 QQAEPATVTVAPFVGVLAAVA  489 (489)
T ss_pred             ccCcceeecchHHHHHhhhcC
Confidence            999999999999999999873

>PLN02340 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02266 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 5e-41
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 3e-33
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 9e-33
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 7e-31
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 1e-27
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 8e-24
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 8e-24
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 3e-18
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 8e-07
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  165 bits (418), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 140/430 (32%), Positives = 200/430 (46%), Gaps = 65/430 (15%)
Query: 47  DSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWG 106
           D      DL GGY+DAGD +KF FP ++  T+L+W +I++ A Y +AG L+  ++ +KW 
Sbjct: 40  DQGDQGQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWA 99
Query: 107 TDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECTSS-- 164
           TDY +K       S +    QVG GD         D   W RPE +   RP  +  +S  
Sbjct: 100 TDYFIKAHT----SQNEFYGQVGQGDA--------DHAFWGRPEDMTMARPAYKIDTSRP 147
Query: 165 -SDLAAEM----AAASIVFKD-NEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYN 218
            SDLA E     AAASIVF++ +  YS  L+  A  +F F+  YRG+YS    +A  FY 
Sbjct: 148 GSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYA 207
Query: 219 SRSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTAX 278
           S  Y DE  W+ AWLY AT +++YL   T   L  + G+         L+WD+  +G   
Sbjct: 208 SADYRDELVWAAAWLYRATNDNTYLN--TAESLYDEFGLQNW---GGGLNWDSKVSGVQV 262
Query: 279 XXXXXXXXXXXGYPYDEMLRAFHNQTAI--TMCSYLPNFSSWNATKAKLSFSFYRRLIQL 336
                            +L    N+ A   T+ SY+ N+   N  K      +      L
Sbjct: 263 -----------------LLAKLTNKQAYKDTVQSYV-NYLINNQQKTPKGLLYIDMWGTL 304
Query: 337 NHGRPQPLQYVTNAAFLA------SLFSNCLSCWFTWMIDYILGNNPQKMSYLVGFGSPY 390
            H          NAAF+        L ++    +    IDY LG+  +  S++ GFGS  
Sbjct: 305 RH--------AANAAFIMLEAAELGLSASSYRQFAQTQIDYALGDGGR--SFVCGFGSNP 354
Query: 391 PQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNY 450
           P   HHR +S P      +C   W   +S  PN + L GA+V GP ++D + D RS+Y +
Sbjct: 355 PTRPHHRSSSCPPAPA--TCD--WNTFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVH 410
Query: 451 TVPTLHDNAG 460
                  NAG
Sbjct: 411 NEVATDYNAG 420
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 1e-106
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-106
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 1e-105
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-105
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 1e-104
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 1e-101
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 2e-98
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 2e-89
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 1e-79
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 7e-46
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
 Score =  328 bits (843), Expect = e-106
 Identities = 123/480 (25%), Positives = 194/480 (40%), Gaps = 73/480 (15%)

Query: 28  PSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYR 87
           P+        DS + DG      +  DL GG+YDAGD +KF+ P S+   ML+WS+ E +
Sbjct: 26  PADKRDNWRDDSGMKDGS----DVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDK 81

Query: 88  AKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWI 147
             Y+ +G+  ++ + IKW  DY +K              QVG G          D   W 
Sbjct: 82  DAYDKSGQTKYIMDGIKWANDYFIKCNPTP----GVYYYQVGDGG--------KDHSWWG 129

Query: 148 RPEGIDYDRPVQECTSS-------SDLAAEMAAASIVFKD-NEEYSKKLIHSAIMIFKFS 199
             E +  +RP  +  +S       +  AA +A+A++VFK  +  Y++K I  A  +F  +
Sbjct: 130 PAEVMQMERPSFKVDASKPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNLFDMA 189

Query: 200 RQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTT--TGLGKQAGI 257
            + +         A  +Y+S S++D+ +W+  WLY AT +S+YL    +     GK+   
Sbjct: 190 DKAKSDAGYT--AASGYYSSSSFYDDLSWAAVWLYLATNDSTYLDKAESYVPNWGKEQQT 247

Query: 258 FRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSS 317
                      WD++  G  LLL++L          +  L  +      T  SY P   +
Sbjct: 248 DIIAYKWG-QCWDDVHYGAELLLAKLTNKQLYKDSIEMNLDFWTTGVNGTRVSYTPKGLA 306

Query: 318 WNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFS----------NCLSCWFTW 367
           W                         L++ T  AFLA +++          +    +   
Sbjct: 307 WLFQWG-------------------SLRHATTQAFLAGVYAEWEGCTPSKVSVYKDFLKS 347

Query: 368 MIDYILGNNPQKMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTL 427
            IDY LG+     S++VG+G   PQ+ HHR A                   S   + +T+
Sbjct: 348 QIDYALGSTG--RSFVVGYGVNPPQHPHHRTAHGS----------WTDQMTSPTYHRHTI 395

Query: 428 VGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVAALVALSGKKSTGGIDKSTIFTEVP 487
            GA+V GP   DG+ D  +NY         NAG   AL  +       G D    F  + 
Sbjct: 396 YGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALAKMY---KHSGGDPIPNFKAIE 452
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query493
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 94.03
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 92.02
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 88.46
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 87.06
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
Probab=100.00  E-value=6.3e-104  Score=834.18  Aligned_cols=401  Identities=36%  Similarity=0.598  Sum_probs=357.7

Q ss_pred             CCcccccC--------------CCCCCCCCccCCCCCCCCCCCCCccccccccccccCCCcccccchHHHHHHHHHHHHH
Q 041590           20 PNYTLDTR--------------PSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIE   85 (493)
Q Consensus        20 ~~y~~al~--------------p~~~~~~Wr~~s~l~Dg~~~~~~~~~dlsGGWyDAGDy~Ky~~~~a~tv~~L~wa~~e   85 (493)
                      +||.++|+              |.++|++||+||||.||+..    ++||+|||||||||+||++|+|+|+++|+|+++|
T Consensus         3 ~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~----~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e   78 (433)
T 1ks8_A            3 YDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQ----GQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLID   78 (433)
T ss_dssp             CCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTT----CCBCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcC----cccCCCceeECCCCCeeccchHHHHHHHHHHHHH
Confidence            58888887              88999999999999999766    9999999999999999999999999999999999


Q ss_pred             hHHHHhhcCChHHHHHHHHHHHHHHhhccccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCccccccC---
Q 041590           86 YRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECT---  162 (493)
Q Consensus        86 ~~~~~~~~~~~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~---  162 (493)
                      |++.|++++++||||||||||+|||||||+++    |.||+|||++..        ||.+|++||+++++|++|+++   
T Consensus        79 ~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~----g~~y~qVgd~~~--------Dh~~w~~Pe~~~~~R~~y~~~~~~  146 (433)
T 1ks8_A           79 FEAGYSSAGALDDGRKAVKWATDYFIKAHTSQ----NEFYGQVGQGDA--------DHAFWGRPEDMTMARPAYKIDTSR  146 (433)
T ss_dssp             THHHHHHTTCHHHHHHHHHHHHHHHHHHCCBT----TBEEEEESCHHH--------HHTCCSCGGGCCSCCCEEEECSSS
T ss_pred             hHHhhhcCCchHHHHHHHHHHHHHHHHhccCC----CcEEEEeCCCCc--------CCcccCCHhhCCCCCceeeccCCC
Confidence            99999999999999999999999999999988    999999999977        999999999999999999876   


Q ss_pred             chHHH----HHHHHHhhcccc-CCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHh
Q 041590          163 SSSDL----AAEMAAASIVFK-DNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYAT  237 (493)
Q Consensus       163 ~~~d~----Aa~~AaAs~v~k-~D~~yA~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~~~~De~~wAAaeLy~AT  237 (493)
                      |++++    ||++|+|||||| +||+||++||++||++|+||++||+.|.++++...++|+|+++.||++|||+|||+||
T Consensus       147 pgs~~a~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~ss~~~DE~~WAAa~Ly~aT  226 (433)
T 1ks8_A          147 PGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWLYRAT  226 (433)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCCCCTHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCCCCcccHHHHHHHHHHHHh
Confidence            65554    566666999999 9999999999999999999999999998777767789999999999999999999999


Q ss_pred             CChhhHHHHHhcccCCccccccCcCCCCccCCCchHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHhhcCCCCC
Q 041590          238 GNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSS  317 (493)
Q Consensus       238 Gd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (493)
                      |+++|++++++++.     .+........|+|+++..+++++|++++   .        .+.|++.++.++|.++.   .
T Consensus       227 gd~~Yl~~~~~~~~-----~~~~~~~~~~~~Wd~~~~g~~~lla~~~---~--------~~~~~~~~~~~~~~~~~---~  287 (433)
T 1ks8_A          227 NDNTYLNTAESLYD-----EFGLQNWGGGLNWDSKVSGVQVLLAKLT---N--------KQAYKDTVQSYVNYLIN---N  287 (433)
T ss_dssp             CCHHHHHHHHHHHH-----HTTGGGSCCCCCSSCCHHHHHHHHHHHH---C--------CHHHHHHHHHHHHHHHH---T
T ss_pred             CCHHHHHHHHHHHH-----hcCcCcCcCCcCccchhhHHHHHHhhcc---C--------hHHHHHHHHHHHHHHHh---c
Confidence            99999999998642     1111123457999999999999998753   1        25688888888887763   3


Q ss_pred             CccCCCCcchhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHH-H-----HHHHHHhchhhccCCCCCCceEeeeCCCCC
Q 041590          318 WNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNC-L-----SCWFTWMIDYILGNNPQKMSYLVGFGSPYP  391 (493)
Q Consensus       318 ~~~t~~G~~~~~y~~l~~~~~~~wgs~~~~~n~a~l~~~~~~~-~-----~~~a~~qidYiLG~Np~~~SyV~G~G~~~p  391 (493)
                      .++||+|        +++..  .||||++++|++|++++++++ +     +++|++|||||||+|  ++|||||||+|+|
T Consensus       288 ~~~tp~G--------l~~~~--~WGs~~~~~n~a~l~~~~~~~~~~~~~y~~~A~~qldYiLG~n--~~SyvvG~G~~~p  355 (433)
T 1ks8_A          288 QQKTPKG--------LLYID--MWGTLRHAANAAFIMLEAAELGLSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPP  355 (433)
T ss_dssp             SCBCTTS--------CBCCC--STTHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCC
T ss_pred             CCcCCCC--------ceeec--CCchhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhHhhccCCC--CcceEeccCCCCC
Confidence            4679999        65543  589999999999999999998 3     689999999999998  6899999999999


Q ss_pred             CCcccCCCCCCCCcccccccCCcccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccccchHHHHHHHHhhcC
Q 041590          392 QYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVAALVALSGK  471 (493)
Q Consensus       392 ~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~  471 (493)
                      ++||||+++||..  +..|.  +.+.+++.||+++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+|.+.
T Consensus       356 ~~pHHR~s~~~~~--~~~c~--~~~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~  431 (433)
T 1ks8_A          356 TRPHHRSSSCPPA--PATCD--WNTFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVAL  431 (433)
T ss_dssp             SCCSCHHHHCCCT--TSCCS--HHHHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCcchhhcCCCc--ccccc--ccccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHhHHHHHHHHHHHHhc
Confidence            9999999999854  45785  4467889999999999999999999999999999999999999999999999999764
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 493
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-103
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 2e-95
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 2e-94
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 8e-93
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 2e-75
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-69
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  314 bits (807), Expect = e-103
 Identities = 131/463 (28%), Positives = 191/463 (41%), Gaps = 64/463 (13%)

Query: 28  PSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYR 87
           P  + +   GDS L DG     G+  DL GG+YDAGD +KF FP +F  TML+W  IE  
Sbjct: 26  PENNRVSWRGDSGLNDGA--DVGL--DLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESP 81

Query: 88  AKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWI 147
             Y  +G++ ++K+ ++W  DY +K         + +  QVG GD         D   W 
Sbjct: 82  EGYIRSGQMPYLKDNLRWVNDYFIKAHPSP----NVLYVQVGDGDA--------DHKWWG 129

Query: 148 RPEGIDYDRP---VQECTSSSDLAAE----MAAASIVFKD-NEEYSKKLIHSAIMIFKFS 199
             E +  +RP   V      SD+AAE    MAA+SIVF D +  Y+  L+  A  ++ F+
Sbjct: 130 PAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFA 189

Query: 200 RQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTTTG-LGKQAGIF 258
             YRG YS       ++ +   Y DE  W   WLY ATG+ SYL                
Sbjct: 190 DTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDFLSTEQQT 249

Query: 259 RGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSSW 318
                   ++WD+   GT +LL++           +  L  +          Y P   + 
Sbjct: 250 DLRSYRWTIAWDDKSYGTYVLLAKETGKQKYIDDANRWLDYWTVGVNGQRVPYSPGGMAV 309

Query: 319 NATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCLSCWFTW---------MI 369
                                    L+Y  N AF+A +++  +                I
Sbjct: 310 -------------------LDTWGALRYAANTAFVALVYAKVIDDPVRKQRYHDFAVRQI 350

Query: 370 DYILGNNPQKMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVG 429
           +Y LG+NP+  SY+VGFG+  P+  HHR A                   S   N + L G
Sbjct: 351 NYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGS----------WTDSIASPAENRHVLYG 400

Query: 430 AMVAGPH-KHDGFHDVRSNYNYTVPTLHDNAGLVAALVALSGK 471
           A+V GP   +D + D R +Y         NAG  +AL  L  +
Sbjct: 401 ALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEE 443
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query493
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 90.48
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 80.02
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=2.1e-96  Score=781.76  Aligned_cols=408  Identities=31%  Similarity=0.496  Sum_probs=345.8

Q ss_pred             CCCcccccC--------------CCCCCCCCccCCCCCCCCCCCCCccccccccccccCCCcccccchHHHHHHHHHHHH
Q 041590           19 SPNYTLDTR--------------PSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVI   84 (493)
Q Consensus        19 ~~~y~~al~--------------p~~~~~~Wr~~s~l~Dg~~~~~~~~~dlsGGWyDAGDy~Ky~~~~a~tv~~L~wa~~   84 (493)
                      ..||++||+              |+.+|++||++||+.||++.    ++||+|||||||||+||++|+++++++|+|+++
T Consensus         3 ~~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~----~~DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~   78 (460)
T d1tf4a1           3 AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADV----GLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAI   78 (460)
T ss_dssp             SSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGG----TSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccC----cCCCCCCceeCCCcceecccHHHHHHHHHHHHH
Confidence            459999997              88999999999999999877    999999999999999999999999999999999


Q ss_pred             HhHHHHhhcCChHHHHHHHHHHHHHHhhccccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCccccccC--
Q 041590           85 EYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECT--  162 (493)
Q Consensus        85 e~~~~~~~~~~~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~--  162 (493)
                      +|++.|+++|++||||||+|||+|||+|||+++    +.||+|||+++.        ||.+|++|+.++.+|+.+.+.  
T Consensus        79 ~~~~~~~~~~~~pdlLdE~~wglD~llkmq~~~----g~~y~qvgdg~~--------dh~~w~~~~~~~~~~~~~~~~~~  146 (460)
T d1tf4a1          79 ESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSP----NVLYVQVGDGDA--------DHKWWGPAEVMPMERPSFKVDPS  146 (460)
T ss_dssp             HCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBT----TBEEEEESCHHH--------HHHCCSCGGGCCSCCCEEEEBTT
T ss_pred             HChHhhhcCCCcHHHHHHHHHHHHHHHhcccCC----CeEEEEecCCCc--------cccccCCCcCCCCCCCcceecCC
Confidence            999999999999999999999999999999988    999999999876        999999999988888877653  


Q ss_pred             -ch----HHHHHHHHHhhcccc-CCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccccCCCCchhHHHHHHHHHHHH
Q 041590          163 -SS----SDLAAEMAAASIVFK-DNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYA  236 (493)
Q Consensus       163 -~~----~d~Aa~~AaAs~v~k-~D~~yA~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~~~~De~~wAAaeLy~A  236 (493)
                       ++    .++||+||+|||||| +||+||++||++||++|+||++||+.|....+.+..+|.++++.||++|||+|||++
T Consensus       147 ~~~t~~~~~~aAalA~as~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~De~~wAAaeLy~a  226 (460)
T d1tf4a1         147 CPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKA  226 (460)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHCCSSCSHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCcCCCccccchHHHHHHHHHHHH
Confidence             43    456778888999999 999999999999999999999999999876665555777899999999999999999


Q ss_pred             hCChhhHHHHHhcccCCccccc-cCcCCCCccCCCchHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHhhcCCC
Q 041590          237 TGNSSYLKLVTTTGLGKQAGIF-RGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNF  315 (493)
Q Consensus       237 TGd~~Yl~~a~~~~~~~~~~~~-~~~~~~~~~~Wd~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (493)
                      ||+++|+++++........... ........++|+++..+.++++++.+   .        ...+++.++..++.+....
T Consensus       227 TG~~~Y~~~a~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~la~~~---~--------~~~~~~~~~~~~~~~~~~~  295 (460)
T d1tf4a1         227 TGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKET---G--------KQKYIDDANRWLDYWTVGV  295 (460)
T ss_dssp             HCCHHHHHHHHHHGGGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHH---C--------CHHHHHHHHHHHHHTTTCB
T ss_pred             hCCHHHHHHHHHHhhhcccccccccccccccccccchhHHHHHHHHHHh---h--------hhHHHHHHHHHHHHHhhhc
Confidence            9999999999876421111100 01122346899999998888877643   1        2456666666766655432


Q ss_pred             --CCCccCCCCcchhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHHH---------HHHHHHhchhhccCCCCCCceEe
Q 041590          316 --SSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCL---------SCWFTWMIDYILGNNPQKMSYLV  384 (493)
Q Consensus       316 --~~~~~t~~G~~~~~y~~l~~~~~~~wgs~~~~~n~a~l~~~~~~~~---------~~~a~~qidYiLG~Np~~~SyV~  384 (493)
                        .....+++|        +.+.  +.|||+++++|++|++++++++.         +++|++|||||||+||+++||||
T Consensus       296 ~~~~~~~~~~~--------~~~~--~~WGsn~~~~n~a~~~~~a~~~~~~~~~~~~y~~~A~~qldylLG~Np~~~SyVt  365 (460)
T d1tf4a1         296 NGQRVPYSPGG--------MAVL--DTWGALRYAANTAFVALVYAKVIDDPVRKQRYHDFAVRQINYALGDNPRNSSYVV  365 (460)
T ss_dssp             TTBCCCBCTTS--------CBCC--CSSSHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTCSTTCCCSBT
T ss_pred             ccccCCcCCCc--------ceec--CCCchHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHhhheecccCCCCcCCCc
Confidence              233456666        3333  35899999999999999998874         57899999999999999999999


Q ss_pred             eeCCCCCCCcccCCCCCCCCcccccccCCcccccCCCCCCCCccceeecCCC-CCCCcccccCcccccccccccchHHHH
Q 041590          385 GFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPH-KHDGFHDVRSNYNYTVPTLHDNAGLVA  463 (493)
Q Consensus       385 G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLvGGPn-~~d~y~D~~~~y~~NEvaId~NA~lv~  463 (493)
                      |||+|+|++||||.++|+..          .+...+.||+++|+|+|||||| +.+||+|++++|++|||||||||+||+
T Consensus       366 G~G~~~p~~pHHR~s~~~~~----------~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~  435 (460)
T d1tf4a1         366 GFGNNPPRNPHHRTAHGSWT----------DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSS  435 (460)
T ss_dssp             TSSSSCCSCCSCHHHHTCSS----------SCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHH
T ss_pred             cCCCCCCCCCcCccccCCCc----------cccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHH
Confidence            99999999999999887542          1234578889999999999999 579999999999999999999999999


Q ss_pred             HHHHhhcCCC
Q 041590          464 ALVALSGKKS  473 (493)
Q Consensus       464 ~la~l~~~~~  473 (493)
                      +||+|.+..+
T Consensus       436 ~la~l~~~~~  445 (460)
T d1tf4a1         436 ALAMLVEEYG  445 (460)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHhcC
Confidence            9999988765
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure