Citrus Sinensis ID: 041699

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200---
Protein Sequence
MGRDKMMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSPDAKIFKEAGGDSSTASTTDTTPPTSAGSTTTPSSSSSSPDSSSKSDTTNDKATTSSSNGAKTVSFGTASLLMMIASYALVIFM
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHccccccccccHHHHHccccccHHHHccccccccHHHHHHHHHHHHccccccccEEcccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccHccccccccccHHHHHHHHHHcccccEEEEEEccccccccccEEcHHHHHccccHccccccccHcHHHcccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MGRDKMMIIFCIVMASLAMASMATIEDDEQECAEQLTNlascipfvsgtakkptseccqdtqklkaskpkcLCVLIkestdpsmglpinttlalqmpaacnidasvsscpkllnlapdspdakifkeaggdsstasttdttpptsagstttpsssssspdsssksdttndkattsssngaktvsFGTASLLMMIASYALVIFM
Flexible Loop (DISEMBL)
MGRDKMMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDtqklkaskpkcLCVLIKEstdpsmglPINTTLALQMPAACNIDASVSSCPKLLNLAPDSPDAKIFKEaggdsstasttdttpptsagstttpsssssspdsssksdttndkattsssngaktvsfGTASLLMMIASYALVIFM
Low Complexity Region (SEG)
MGRDKMMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSPDAKIFKEaggdsstasttdttpptsagstttpsssssspdsssksdttndkattsssnGAKTVSFGTASLLMMIASYALVIFM
Disordered region (IsUnstruct)
*****MMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTA******CC*****L*ASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLL*********************************************************************VSFGTASLLMMIASYALVIF*
Disordered Region (DISOPRED)
******M*IFCIVMASLAMA***************LTNLASCIPFVS*TAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVS*****************************************************************************FGTASLLMMIASYALVIFM
Disordered Region (DISEMBL)
MGRDKMMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSG*****************ASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSPDAKIFKE****************************************************AKTVSFGTASLLMMIASYALVIFM
Disordered Region (DISPRO)
***DKMMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDS***************************************************************VSFGTASLLMMIASYALVIFM
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGRDKMMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSPDAKIFKEAGGDSSTASTTDTTPPTSAGSTTTPSSSSSSPDSSSKSDTTNDKATTSSSNGAKTVSFGTASLLMMIASYALVIFM
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	203	2.2.26 [Sep-21-2011]
Q9C7F7	193	Uncharacterized GPI-ancho	no	no	0.630	0.663	0.314	6e-14
Q8VYI9	182	Non-specific lipid-transf	no	no	0.458	0.510	0.35	1e-06
Q9ZQI8	169	Non-specific lipid-transf	no	no	0.788	0.946	0.253	2e-05

>sp|Q9C7F7|UGPI5_ARATH Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis thaliana GN=At1g27950 PE=1 SV=1

 Score = 77.4 bits (189), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 12/140 (8%)

Query: 31  ECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLP--- 87
           EC +    +  C+ F +G A  P+ +CC   + +K   PKCLC +I+++      L    
Sbjct: 34  ECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDLG 93

Query: 88  INTTLALQMPAACNI-DASVSSCPKLLNLAPDSPDAKIFKEAGGDSSTASTTDTTPPTSA 146
           +     +Q+P +C + +AS+++CPKLL ++P SPDA +F      ++ A+TT   P  + 
Sbjct: 94  VQEDKLIQLPTSCQLHNASITNCPKLLGISPSSPDAAVF------TNNATTTPVAP--AG 145

Query: 147 GSTTTPSSSSSSPDSSSKSD 166
            S  TP++S+    S+S  D
Sbjct: 146 KSPATPATSTDKGGSASAKD 165

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYI9|NLTL5_ARATH Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 7/100 (7%)

Query: 23  ATIEDDEQECAEQLTNLASCIPFVS--GTAKKPTSECCQDTQKLKASKPKCLCVLIKEST 80
           AT      +C+  + N+A C+ FVS  GT  KP   CC   + +  +  +CLC   K S 
Sbjct: 34  ATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSA 93

Query: 81  DPSMGLPINTTLALQMPAACNIDA-SVSSCPKLLNLAPDS 119
             S+G+ +N T A  +PAAC + A S+++C   L++AP +
Sbjct: 94  --SLGVTLNITKASTLPAACKLHAPSIATCG--LSVAPST 129

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZQI8|NLTL2_ARATH Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1

 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 45/205 (21%)

Query: 1   MGRDKMMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSG--TAKKPTSECC 58
           M    +++IF +V       + A ++     C+  + N+A C+ FV+   T  KP   CC
Sbjct: 1   MAYATILMIFSVVALMSGERAHAAVD-----CSSLILNMADCLSFVTSGSTVVKPEGTCC 55

Query: 59  QDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPD 118
              + +  + P+CLC   K S   S+GL ++ + A  +P+ C + A              
Sbjct: 56  SGLKTVVRTGPECLCEAFKNSG--SLGLTLDLSKAASLPSVCKVAA-------------- 99

Query: 119 SPDAKIFKEAGGDSSTASTTDTTPPTSAGSTTTPSSSSSSPDSSSKSDTTNDKATTSSSN 178
            P A+      GD          PP +A    +P++ + +P  SS ++     ++  SS+
Sbjct: 100 PPSARCGLSVSGD----------PPATA-PGLSPTAGAGAPALSSGANAATPVSSPRSSD 148

Query: 179 GAKTVSFGTASLLMMIASYALVIFM 203
                    ASLL +  S+A VIFM
Sbjct: 149 ---------ASLLSV--SFAFVIFM 162

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
225445346	194	PREDICTED: uncharacterized GPI-anchored	0.935	0.979	0.608	2e-57
297738876	260	unnamed protein product [Vitis vinifera]	0.674	0.526	0.733	3e-53
255549022	188	lipid binding protein, putative [Ricinus	0.926	1.0	0.586	2e-50
224120938	197	predicted protein [Populus trichocarpa]	0.891	0.918	0.382	8e-31
225435694	188	PREDICTED: non-specific lipid-transfer p	0.847	0.914	0.407	2e-29
15224863	204	xylogen-like protein 10 [Arabidopsis tha	0.832	0.828	0.397	5e-29
297746438	174	unnamed protein product [Vitis vinifera]	0.625	0.729	0.507	6e-29
297746435	171	unnamed protein product [Vitis vinifera]	0.822	0.976	0.413	8e-29
147790626	595	hypothetical protein VITISV_016657 [Viti	0.694	0.236	0.417	1e-28
15224862	205	xylogen-like protein 10 [Arabidopsis tha	0.916	0.907	0.379	2e-28

>gi|225445346|ref|XP_002281585.1| PREDICTED: uncharacterized GPI-anchored protein At1g27950 [Vitis vinifera]

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/202 (60%), Positives = 156/202 (77%), Gaps = 12/202 (5%)

Query: 1   MGRDKMMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQD 60
           MGR K +++F  V+  L + SM T+EDDE++CA+QLTNLA+CIPFVSGTAKKPT +CCQD
Sbjct: 1   MGRSKKVMVFSFVVGLLVVGSMGTMEDDEKDCADQLTNLAACIPFVSGTAKKPTQQCCQD 60

Query: 61  TQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSP 120
           TQK+K+SKPKCLCVLIKESTDPS+GLP+NTTLALQMP+ACNIDA VS CP LL+L PDS 
Sbjct: 61  TQKVKSSKPKCLCVLIKESTDPSLGLPVNTTLALQMPSACNIDAKVSDCPTLLSLPPDSA 120

Query: 121 DAKIFKEAGGDSSTASTTDTTPPTSAGSTTTPSSSSSSPDSSSKSDTTNDKATTSSSNGA 180
           DAKIFKEA  DSS  S+TD+ P +++ S+++  SSS          + + KAT +S+ G 
Sbjct: 121 DAKIFKEA--DSSAESSTDSPPASTSTSSSSSGSSS----------SADSKATPTSNGGG 168

Query: 181 KTVSFGTASLLMMIASYALVIF 202
           K  SFG+ SLLM++AS A +  
Sbjct: 169 KLKSFGSGSLLMIMASIAWMFI 190

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738876|emb|CBI28121.3| unnamed protein product [Vitis vinifera]

 Score =  213 bits (543), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 102/139 (73%), Positives = 120/139 (86%), Gaps = 2/139 (1%)

Query: 1   MGRDKMMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQD 60
           MGR K +++F  V+  L + SM T+EDDE++CA+QLTNLA+CIPFVSGTAKKPT +CCQD
Sbjct: 41  MGRSKKVMVFSFVVGLLVVGSMGTMEDDEKDCADQLTNLAACIPFVSGTAKKPTQQCCQD 100

Query: 61  TQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSP 120
           TQK+K+SKPKCLCVLIKESTDPS+GLP+NTTLALQMP+ACNIDA VS CP LL+L PDS 
Sbjct: 101 TQKVKSSKPKCLCVLIKESTDPSLGLPVNTTLALQMPSACNIDAKVSDCPTLLSLPPDSA 160

Query: 121 DAKIFKEAGGDSSTASTTD 139
           DAKIFKEA  DSS  S+TD
Sbjct: 161 DAKIFKEA--DSSAESSTD 177

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549022|ref|XP_002515567.1| lipid binding protein, putative [Ricinus communis] gi|223545511|gb|EEF47016.1| lipid binding protein, putative [Ricinus communis]

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/203 (58%), Positives = 142/203 (69%), Gaps = 15/203 (7%)

Query: 1   MGRDKMMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQD 60
           MG  K M +  IV+ SL + S A+++ DEQ+CA+QLTNLASCIP+VSGTAK PT +CCQD
Sbjct: 1   MGSVKKMAVCWIVVVSLIIGSEASLQQDEQDCADQLTNLASCIPYVSGTAKNPTPQCCQD 60

Query: 61  TQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSP 120
           TQK+KASKPKCLCVLIKESTDPSMGLP+NTTLAL MP+ACNIDA VS CP +LNL PDSP
Sbjct: 61  TQKVKASKPKCLCVLIKESTDPSMGLPVNTTLALHMPSACNIDAEVSDCPSILNLPPDSP 120

Query: 121 DAKIFKEAGGDSSTASTTDTTPPTSAGSTTTPSSSSSSPDSSSKSDTTNDKATTSSSNGA 180
           DAKIFKEA   S  A+                S  +S+  SSS S  T  KAT+SS+NGA
Sbjct: 121 DAKIFKEAAASSDAATAAPAD-----------SPPTSASSSSSGSSNTGSKATSSSNNGA 169

Query: 181 KTVSFGTASLLMMIASYALVIFM 203
           K   F       +I ++A  +FM
Sbjct: 170 KKKMFWGG----VITAFAASMFM 188

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120938|ref|XP_002330863.1| predicted protein [Populus trichocarpa] gi|222872685|gb|EEF09816.1| predicted protein [Populus trichocarpa]

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 107/196 (54%), Gaps = 15/196 (7%)

Query: 8   IIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKAS 67
           I+   VM SLAMA     + D +ECAEQL  LA+C+P+V G AK PT +CC   +++   
Sbjct: 17  IVLMSVMVSLAMAGK---DKDSEECAEQLVGLATCLPYVGGDAKAPTPDCCNGLKQVLKD 73

Query: 68  KPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSPDAKIFKE 127
             KCLCV+IK+  DP +GL IN TLAL +P+ C+  A+VS CP LLNL P+SPDA+IF +
Sbjct: 74  NKKCLCVIIKDRNDPELGLKINATLALSLPSVCHAPANVSQCPALLNLPPNSPDAQIFYQ 133

Query: 128 AGGDSSTASTTDTTPPTSAGSTTTPSSSSSSPDSSSKSDTTNDKATTSSSNGAKTVSFGT 187
               S+  +++    P+  G         + P   S    +N   +   + G +  S G 
Sbjct: 134 LANSSNHIASSPALSPSPGG---------AQPQGRSAQQESNGCHSGKINFGLQIASLGV 184

Query: 188 ASLLMMIASYALVIFM 203
                 I S+   +FM
Sbjct: 185 LGWCFNIYSH---LFM 197

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435694|ref|XP_002283442.1| PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Vitis vinifera]

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/189 (40%), Positives = 111/189 (58%), Gaps = 17/189 (8%)

Query: 12  IVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKC 71
           +V+  L M++ A    D +ECA+QL  LA+C+P+V G  K PT +CC   +++     KC
Sbjct: 14  LVIMMLLMSASADFAKDREECADQLVGLATCLPYVGGEGKSPTLDCCTGLKQVLQKARKC 73

Query: 72  LCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSPDAKIFKEAGGD 131
           LC+LIK+  DP++GL IN TLA+ +P+AC+  A++S+CP LL L   SPDAKIF+E G  
Sbjct: 74  LCILIKDRNDPNLGLKINATLAMGLPSACHAPANISACPALLQLPAGSPDAKIFEEYG-- 131

Query: 132 SSTASTTDTTPPTSAGSTTTPSSSSSSPDSSSKSDTTNDKATTSSSNGAKTVSFGTASLL 191
               ++T  +  TS  S    SSS SS +   KSD    +       G + V FG   LL
Sbjct: 132 ----NSTAASKSTSVASAKANSSSGSSAE--MKSDGGRRRWV-----GVELV-FG---LL 176

Query: 192 MMIASYALV 200
            +I S+ L+
Sbjct: 177 FLIVSHLLL 185

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15224863|ref|NP_181959.1| xylogen-like protein 10 [Arabidopsis thaliana] gi|3128176|gb|AAC16080.1| unknown protein [Arabidopsis thaliana] gi|30017223|gb|AAP12845.1| At2g44300 [Arabidopsis thaliana] gi|84778478|dbj|BAE73266.1| xylogen like protein 10 [Arabidopsis thaliana] gi|330255311|gb|AEC10405.1| xylogen-like protein 10 [Arabidopsis thaliana]

 Score =  133 bits (334), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 101/176 (57%), Gaps = 7/176 (3%)

Query: 28  DEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLP 87
           D++EC EQL  +A+C+P+V G AK PT +CC   +++  S  KCLCV+I++  DP +GL 
Sbjct: 31  DKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRNDPDLGLQ 90

Query: 88  INTTLALQMPAACNIDASVSSCPKLLNLAPDSPDAKIFKEAGGDSSTASTTDTTPPTSAG 147
           IN +LAL +P+ C+  A V+ CP LL+L P+SPDA++F +       A   + T P SA 
Sbjct: 91  INVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVFYQ------LAKGLNKTGPASAP 144

Query: 148 STTTPSSSSSSPDSSSKSDTTNDKATTSSSNGAKTVSFGTASLLMMIASYALVIFM 203
           + ++P   S SP S S  D  N   TTS        SF    L + +  +  VIF 
Sbjct: 145 TGSSPGPISISPTSGS-DDGNNSGRTTSVPGRNHAQSFYKQWLGLEVVFHFFVIFY 199

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746438|emb|CBI16494.3| unnamed protein product [Vitis vinifera]

 Score =  132 bits (333), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 66/130 (50%), Positives = 87/130 (66%), Gaps = 3/130 (2%)

Query: 17  LAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLI 76
           L M++ A    D QECA+QL  LA+C+P+V G  K PT +CC   +++     KCLCVLI
Sbjct: 3   LLMSASADFAKDRQECADQLVGLATCLPYVQGEGKAPTLDCCTGLKQVLQKSKKCLCVLI 62

Query: 77  KESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSPDAKIFKEAGGDSSTAS 136
           K+  DP++G  INTTLAL +P ACN  A++S CP LL L P SPDAKIF+E+G   ++  
Sbjct: 63  KDRDDPNLGFKINTTLALSLPTACNTPANMSECPALLQLPPGSPDAKIFEESG---NSTV 119

Query: 137 TTDTTPPTSA 146
           TT +TP  SA
Sbjct: 120 TTKSTPVASA 129

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746435|emb|CBI16491.3| unnamed protein product [Vitis vinifera]

 Score =  132 bits (332), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 108/184 (58%), Gaps = 17/184 (9%)

Query: 17  LAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLI 76
           L M++ A    D +ECA+QL  LA+C+P+V G  K PT +CC   +++     KCLC+LI
Sbjct: 2   LLMSASADFAKDREECADQLVGLATCLPYVGGEGKSPTLDCCTGLKQVLQKARKCLCILI 61

Query: 77  KESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSPDAKIFKEAGGDSSTAS 136
           K+  DP++GL IN TLA+ +P+AC+  A++S+CP LL L   SPDAKIF+E G      +
Sbjct: 62  KDRNDPNLGLKINATLAMGLPSACHAPANISACPALLQLPAGSPDAKIFEEYG------N 115

Query: 137 TTDTTPPTSAGSTTTPSSSSSSPDSSSKSDTTNDKATTSSSNGAKTVSFGTASLLMMIAS 196
           +T  +  TS  S    SSS SS +   KSD    +       G + V FG   LL +I S
Sbjct: 116 STAASKSTSVASAKANSSSGSSAE--MKSDGGRRRWV-----GVELV-FG---LLFLIVS 164

Query: 197 YALV 200
           + L+
Sbjct: 165 HLLL 168

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147790626|emb|CAN59826.1| hypothetical protein VITISV_016657 [Vitis vinifera]

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 92/146 (63%), Gaps = 5/146 (3%)

Query: 28  DEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLP 87
           D+QEC EQL  +A+C+P+V G AK PT +CC   +++     KCLCV+IK+  DP +GL 
Sbjct: 27  DKQECTEQLVGMATCLPYVGGDAKAPTPDCCSGLKQVLQKNKKCLCVIIKDRNDPDLGLN 86

Query: 88  INTTLALQMPAACNIDASVSSCPKLLNLAPDSPDAKIFKE-AGGDSSTASTTDTTPPTSA 146
           +N TLAL +P+ C+  A+VS CP LL+LAP+SPDA++F + A   + TAS+T    P++ 
Sbjct: 87  LNATLALGLPSVCHAPANVSQCPALLHLAPNSPDAQVFYQFANSSNGTASST----PSTG 142

Query: 147 GSTTTPSSSSSSPDSSSKSDTTNDKA 172
             T    +  + P+S       N ++
Sbjct: 143 LHTHGAKAEHAYPESWRIGHLANSRS 168

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15224862|ref|NP_181958.1| xylogen-like protein 10 [Arabidopsis thaliana] gi|3128175|gb|AAC16079.1| unknown protein [Arabidopsis thaliana] gi|26451353|dbj|BAC42777.1| putative non-specific lipid transfer protein nLTP [Arabidopsis thaliana] gi|28973215|gb|AAO63932.1| unknown protein [Arabidopsis thaliana] gi|84778476|dbj|BAE73265.1| xylogen like protein 9 [Arabidopsis thaliana] gi|330255310|gb|AEC10404.1| xylogen-like protein 10 [Arabidopsis thaliana]

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 115/195 (58%), Gaps = 9/195 (4%)

Query: 9   IFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASK 68
           I  I++A +  A+ A    D++EC  QL  +A+C+P+V G AK PT +CC   +++  S 
Sbjct: 13  IALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSD 72

Query: 69  PKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSPDAKIFKE- 127
            KCLC++I+E  DP +GL +N +LAL +P+ C+  A ++ CP LL+L P+SPDA++F + 
Sbjct: 73  MKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQL 132

Query: 128 AGGDSSTASTTDTTPPTSAGSTTTPSSSSSSPDSSSKSDTTNDKATTSSSNGAKTVSFGT 187
           A G + T S +  T     GS + P+S SS+P SS+ +   N   TTS        SF  
Sbjct: 133 AKGLNETVSASAPT-----GSASEPTSMSSTPGSSAGN---NSGRTTSVPGTNHAQSFSK 184

Query: 188 ASLLMMIASYALVIF 202
             L + + ++  VIF
Sbjct: 185 QWLGLEVVAHFFVIF 199

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
TAIR|locus:2050492	204	AT2G44300 [Arabidopsis thalian	0.591	0.588	0.416	1.9e-26
TAIR|locus:2050482	205	AT2G44290 [Arabidopsis thalian	0.576	0.570	0.427	2.9e-25
TAIR|locus:2076406	177	AT3G58550 [Arabidopsis thalian	0.610	0.700	0.382	5.3e-24
TAIR|locus:2035711	227	AT1G55260 [Arabidopsis thalian	0.620	0.555	0.351	1.3e-20
TAIR|locus:2010479	193	LTPG1 "AT1G27950" [Arabidopsis	0.591	0.621	0.304	3.7e-16
TAIR|locus:2031551	193	AT1G73890 [Arabidopsis thalian	0.384	0.404	0.423	3e-14
TAIR|locus:2039366	183	AT2G48130 [Arabidopsis thalian	0.517	0.573	0.333	2.4e-12
TAIR|locus:1006230669	171	AT1G03103 "AT1G03103" [Arabido	0.536	0.637	0.278	3.1e-12
TAIR|locus:2164411	182	XYP1 "xylogen protein 1" [Arab	0.527	0.587	0.338	3.1e-12
TAIR|locus:2043750	169	XYP2 "xylogen protein 2" [Arab	0.522	0.627	0.296	1.9e-11

TAIR|locus:2050492 AT2G44300 [Arabidopsis thaliana (taxid:3702)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 50/120 (41%), Positives = 80/120 (66%)

Query:     6 MMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLK 65
             M     +++ ++ +A+      D++EC EQL  +A+C+P+V G AK PT +CC   +++ 
Sbjct:     9 MATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVL 68

Query:    66 ASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSPDAKIF 125
              S  KCLCV+I++  DP +GL IN +LAL +P+ C+  A V+ CP LL+L P+SPDA++F
Sbjct:    69 NSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVF 128

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2050482 AT2G44290 [Arabidopsis thaliana (taxid:3702)]

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 50/117 (42%), Positives = 79/117 (67%)

Query:     9 IFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASK 68
             I  I++A +  A+ A    D++EC  QL  +A+C+P+V G AK PT +CC   +++  S 
Sbjct:    13 IALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSD 72

Query:    69 PKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSPDAKIF 125
              KCLC++I+E  DP +GL +N +LAL +P+ C+  A ++ CP LL+L P+SPDA++F
Sbjct:    73 MKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVF 129

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2076406 AT3G58550 [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 49/128 (38%), Positives = 81/128 (63%)

Query:     3 RDKMMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQ 62
             ++  M+  CI +A + +   + +  D + C + +++L SC+PFV+  AK P S CC  T 
Sbjct:     9 QNPQMLALCITVAVMFLGVRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCS-TL 67

Query:    63 KLKASKP---KCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDS 119
             K+K  K    KCLC L+K+  DP +G  ++   A+ +P+AC++ A++S CP LL+L PDS
Sbjct:    68 KVKIDKGQTRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDS 127

Query:   120 PDAKIFKE 127
             P ++IFK+
Sbjct:   128 PASQIFKQ 135

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2035711 AT1G55260 [Arabidopsis thaliana (taxid:3702)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 45/128 (35%), Positives = 76/128 (59%)

Query:     1 MGRDKMMIIFCIVMASLAMA-SMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQ 59
             M +    +   IV+ S+ +    + +  D +EC  QL  L++CIP+V G AK PT +CC 
Sbjct:    44 MEKSTRTLFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCA 103

Query:    60 DTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDA-SVSSCPKLLNLAPD 118
                ++     KC+C+L+++  DP +G+ IN TLA  +P+AC+I A +++ C  +L+L  +
Sbjct:   104 GFGQVIRKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRN 163

Query:   119 SPDAKIFK 126
             S  AK F+
Sbjct:   164 STLAKEFE 171

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

TAIR|locus:2010479 LTPG1 "AT1G27950" [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 38/125 (30%), Positives = 70/125 (56%)

Query:     6 MMIIFCIVMASLAMASMATIEDD-EQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKL 64
             ++++   ++AS+A A+ A        EC +    +  C+ F +G A  P+ +CC   + +
Sbjct:     8 LVLVTMTIVASIAAAAPAAPGGALADECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDI 67

Query:    65 KASKPKCLCVLIKESTDPSMGLP---INTTLALQMPAACNI-DASVSSCPKLLNLAPDSP 120
             K   PKCLC +I+++      L    +     +Q+P +C + +AS+++CPKLL ++P SP
Sbjct:    68 KERDPKCLCFVIQQAKTGGQALKDLGVQEDKLIQLPTSCQLHNASITNCPKLLGISPSSP 127

Query:   121 DAKIF 125
             DA +F
Sbjct:   128 DAAVF 132

GO:0003674 "molecular_function" evidence=ND

GO:0006869 "lipid transport" evidence=IEA;IMP

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2031551 AT1G73890 [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 33/78 (42%), Positives = 47/78 (60%)

Query:    32 CAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTT 91
             CA +L +LA C PFV G A+ P   CC    ++ + +  CLC+ +  ++  S   PIN T
Sbjct:    30 CASRLLSLAPCGPFVQGFAQLPAQPCCDSLNQIYSQEATCLCLFLNNTSTLSPAFPINQT 89

Query:    92 LALQMPAACNIDASVSSC 109
             LALQ+P  CNI A+ S+C
Sbjct:    90 LALQLPPLCNIPANSSTC 107

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2039366 AT2G48130 [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 37/111 (33%), Positives = 57/111 (51%)

Query:     1 MG-RDKMMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQ 59
             MG R    I F  ++A+L   + A        C   LT L+ C+ +++G +  P+  CC 
Sbjct:     1 MGYRRSYAITFVALVAALWSVTKA---QPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCS 57

Query:    60 DTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDAS-VSSC 109
                 +  S P+C+C  +  S  P++GL IN T ALQ+P ACNI    ++ C
Sbjct:    58 RLDSVIKSSPQCICSAVN-SPIPNIGLNINRTQALQLPNACNIQTPPLTQC 107

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:1006230669 AT1G03103 "AT1G03103" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 32/115 (27%), Positives = 58/115 (50%)

Query:     6 MMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLK 65
             ++ I  +V+A+       T++     C + LT+L+ C+ +++G +  P+  CC+    + 
Sbjct:     2 ILAILALVIATFLYGGATTVQAG---CRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVV 58

Query:    66 ASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCPKLLNLAPDSP 120
              S P+CLC ++  +     G   N TLAL +P ACN+    +  P L N   + P
Sbjct:    59 QSSPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQ---TPSPSLCNTGGNVP 110

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2164411 XYP1 "xylogen protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 41/121 (33%), Positives = 65/121 (53%)

Query:     9 IFCIVMASLAMASM-------ATIEDDEQECAEQLTNLASCIPFVS--GTAKKPTSECCQ 59
             +F IV+ SL+  S+       AT      +C+  + N+A C+ FVS  GT  KP   CC 
Sbjct:    13 LFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCS 72

Query:    60 DTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDA-SVSSCPKLLNLAPD 118
               + +  +  +CLC   K S   S+G+ +N T A  +PAAC + A S+++C   L++AP 
Sbjct:    73 GLKTVLKADSQCLCEAFKSSA--SLGVTLNITKASTLPAACKLHAPSIATCG--LSVAPS 128

Query:   119 S 119
             +
Sbjct:   129 T 129

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2043750 XYP2 "xylogen protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
 Identities = 35/118 (29%), Positives = 61/118 (51%)

Query:     6 MMIIFCIVMASLAMASMATIEDDEQECAEQLTNLASCIPFV-SG-TAKKPTSECCQDTQK 63
             +++IF +V       + A ++     C+  + N+A C+ FV SG T  KP   CC   + 
Sbjct:     6 ILMIFSVVALMSGERAHAAVD-----CSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKT 60

Query:    64 LKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSS-CPKLLNLAPDSP 120
             +  + P+CLC   K S   S+GL ++ + A  +P+ C + A  S+ C   L+++ D P
Sbjct:    61 VVRTGPECLCEAFKNSG--SLGLTLDLSKAASLPSVCKVAAPPSARCG--LSVSGDPP 114

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	203
cd00010	63	cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibit	3e-12
pfam00234	74	pfam00234, Tryp_alpha_amyl, Protease inhibitor/see	2e-09
pfam14368	95	pfam14368, LTP_2, Probable lipid transfer	8e-08
smart00499	79	smart00499, AAI, Plant lipid transfer protein / se	1e-06
cd01960	89	cd01960, nsLTP1, nsLTP1: Non-specific lipid-transf	2e-04

>gnl|CDD|237980 cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

 Score = 59.0 bits (143), Expect = 3e-12
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 39  LASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPA 98
           LA C+ +++G A  P S+CC   + +  S PKCLC  +      S+    N T AL +PA
Sbjct: 1   LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALN-GPGASLLGLKNATRALALPA 59

Query: 99  ACNI 102
           AC +
Sbjct: 60  ACGL 63

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges. Length = 63

>gnl|CDD|215810 pfam00234, Tryp_alpha_amyl, Protease inhibitor/seed storage/LTP family

 Score = 51.8 bits (124), Expect = 2e-09
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 5/74 (6%)

Query: 32  CAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTT 91
           C + L  LA C  ++ G  + P+ +CC    +L+  + +C C  I+       G  IN  
Sbjct: 1   CGQVLLKLAPCAGYLQGGCQVPSQQCC---SQLRQLQAQCRCTAIRAIVLGIEG--INPQ 55

Query: 92  LALQMPAACNIDAS 105
            A  +P+ C ++  
Sbjct: 56  AAASLPSMCGVNVP 69

This family is composed of trypsin-alpha amylase inhibitors, seed storage proteins and lipid transfer proteins from plants. Length = 74

>gnl|CDD|222713 pfam14368, LTP_2, Probable lipid transfer

 Score = 48.3 bits (115), Expect = 8e-08
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 4/98 (4%)

Query: 13  VMASLAMASMATIEDDEQECAEQLTNLASCIPFVSGTAK-KPTSECCQDTQKLKASKPKC 71
           V+A L  AS A         A    +L  C+ +        P+  CC   +    +   C
Sbjct: 1   VLAVLL-ASAAAAPPAPASAASCADSLLPCLGYCYVNGTAAPSPACCAALKAAVKADVPC 59

Query: 72  LCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSC 109
           LC L+      + G  IN T A+ +P AC + +  S C
Sbjct: 60  LCDLVTSP--LAAGFGINLTRAVALPKACGLTSPPSKC 95

The members of this family are probably involved in lipid transfer. The family has several highly conserved cysteines, paired in various ways. Length = 95

>gnl|CDD|214698 smart00499, AAI, Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

 Score = 44.7 bits (105), Expect = 1e-06
 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 5/81 (6%)

Query: 32  CAEQLTNLASCIPFVSGTA--KKPTSECCQDTQKLKASKPKCLCVLIKESTDP-SMGLPI 88
           C + L  LA C+ ++ G +    P+ +CC   + L +   +C C+ ++ +         +
Sbjct: 1   CGQVLLQLAPCLSYLVGGSRGAPPSQQCCSQLRGLNS--AQCRCLALRAAVLGILEIPGL 58

Query: 89  NTTLALQMPAACNIDASVSSC 109
           N   A  +P+AC +    + C
Sbjct: 59  NAQNAASLPSACGVPPPYTDC 79

Length = 79

>gnl|CDD|238926 cd01960, nsLTP1, nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 15/81 (18%)

Query: 31  ECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASKP---------KCLCVLIKESTD 81
            C +  + LA C+ +++G    P+  CC   + L               CL       + 
Sbjct: 2   SCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGISG 61

Query: 82  PSMGLPINTTLALQMPAACNI 102
                 +N   A  +P  C +
Sbjct: 62  ------LNPGRAAGLPGKCGV 76

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans. Length = 89

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	203
PF14368	96	LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A	99.51
cd01960	89	nsLTP1 nsLTP1: Non-specific lipid-transfer protein	99.45
cd04660	73	nsLTP_like nsLTP_like: Non-specific lipid-transfer	99.44
cd00010	63	AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI),	99.44
cd01959	66	nsLTP2 nsLTP2: Non-specific lipid-transfer protein	99.34
smart00499	79	AAI Plant lipid transfer protein / seed storage pr	99.01
PF00234	90	Tryp_alpha_amyl: Protease inhibitor/seed storage/L	98.61
PF14547	85	Hydrophob_seed: Hydrophobic seed protein	94.93
cd01958	85	HPS_like HPS_like: Hydrophobic Protein from Soybea	93.63
cd00261	110	AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and	85.6
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	80.94

>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A

Probab=99.51  E-value=1.6e-15  Score=112.11  Aligned_cols=81  Identities=32%  Similarity=0.705  Sum_probs=49.6

Q ss_pred             cccccchHhhhccccCCHHHhcCCCCCCCHhHHHHHHHhhcCCCcccccccccCCCCCCCCCCCHHHHhhccccCCCCCC
Q 041699           26 EDDEQECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDAS  105 (203)
Q Consensus        26 a~~~~~C~~~l~~L~pCl~yv~g~~~~PS~~CC~alk~v~~~~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv~~p  105 (203)
                      +....+|...+....+|..|+.+ ...|+..||++++++++.+..|||+++++..  ..+++||.+|++.||++||++.+
T Consensus        16 ~~~~~~c~~~l~~c~~~~~~~~~-~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~--~~~~~in~~~a~~Lp~~Cg~~~~   92 (96)
T PF14368_consen   16 AACCCSCANSLLPCCPCLCYVTG-GPAPSAACCSALKSVVQADPPCLCQLLNSPG--APGFGINVTRALALPAACGVPVP   92 (96)
T ss_dssp             --BTTB-HCCCCHH--HHHHHCC------HHHHHHHCC----HCCHHHCCCC-CC--HCHHCCTCHHHHHHHHHCTSS-S
T ss_pred             CCCcchhHHHHhccccchhccCC-CCCCCHHHHHHHHHhccCCCCCHHHhcCccc--cccCCcCHHHHHHHHHHcCCCCC
Confidence            34556786544444444888884 4689999999999998889999999999842  14467999999999999999997


Q ss_pred             CCCC
Q 041699          106 VSSC  109 (203)
Q Consensus       106 ~s~C  109 (203)
                      .++|
T Consensus        93 ~~~C   96 (96)
T PF14368_consen   93 PSKC   96 (96)
T ss_dssp             ----
T ss_pred             CCCC
Confidence            6666

>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.45  E-value=7.4e-14  Score=103.49  Aligned_cols=72  Identities=22%  Similarity=0.623  Sum_probs=59.2

Q ss_pred             chHhhhccccCCHHHhcCCCCCCCHhHHHHHHHhhcC-----CCcccccccccCCCCCCCCC-CCHHHHhhccccCCCCC
Q 041699           31 ECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKAS-----KPKCLCVLIKESTDPSMGLP-INTTLALQMPAACNIDA  104 (203)
Q Consensus        31 ~C~~~l~~L~pCl~yv~g~~~~PS~~CC~alk~v~~~-----~~~CLC~~lk~~~~~~lg~~-in~trA~~LP~~Cgv~~  104 (203)
                      +|..+...|.||++|++|....|+.+||++++++++.     +..|+|..+++..   .++. ||.+||+.||++||++.
T Consensus         2 ~C~~v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~---~~~~~i~~~~a~~LP~~C~v~~   78 (89)
T cd01960           2 SCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAA---AGISGLNPGRAAGLPGKCGVSI   78 (89)
T ss_pred             CHHHHHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccc---cccCCCCHHHHHhChHhcccCC
Confidence            5899999999999999987778999999999998753     3456666577642   3343 99999999999999997


Q ss_pred             C
Q 041699          105 S  105 (203)
Q Consensus       105 p  105 (203)
                      +
T Consensus        79 ~   79 (89)
T cd01960          79 P   79 (89)
T ss_pred             C
Confidence            4

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.

>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

Probab=99.44  E-value=6.5e-14  Score=100.75  Aligned_cols=71  Identities=32%  Similarity=0.705  Sum_probs=58.2

Q ss_pred             hHhhhccccCCHHHhcCCC--CCCCHhHHHHHHHhhcCCCcccccccccCCCCCCCCCCCHHHHhhccccCCCCCCCCCC
Q 041699           32 CAEQLTNLASCIPFVSGTA--KKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSC  109 (203)
Q Consensus        32 C~~~l~~L~pCl~yv~g~~--~~PS~~CC~alk~v~~~~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv~~p~s~C  109 (203)
                      |...+..|.+|++||+++.  ..|+..||+++|++   +..|+|.+++..   .+. .||.+||..||++||++.+.++|
T Consensus         1 C~~~~~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~---~~~C~C~~~~~~---~~~-~i~~~~a~~Lp~~Cgv~~p~~~C   73 (73)
T cd04660           1 CNMDLDLLAECQPYVTGPNPPPPPSRECCAALRRA---DLPCLCRYKTSL---VLQ-IIDPDKAVYLPAKCGLPLPPSSC   73 (73)
T ss_pred             CCCCHHHHHHHHHHHcCCCCCCCCCHHHHHHHHcC---CcCCEeeccCCC---ccc-ccCHHHHHHHHHHcCCCCCCCCC
Confidence            5566778999999999765  36899999999986   667999888753   333 49999999999999999865766

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.

>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

Probab=99.44  E-value=9.7e-14  Score=96.13  Aligned_cols=63  Identities=38%  Similarity=0.839  Sum_probs=53.4

Q ss_pred             ccCCHHHhcCCCCCCCHhHHHHHHHhhcCCCcccccccccCCCCCCCCCCCHHHHhhccccCCC
Q 041699           39 LASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNI  102 (203)
Q Consensus        39 L~pCl~yv~g~~~~PS~~CC~alk~v~~~~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv  102 (203)
                      |.||++|++|+...|+..||++++++++.+..|+|+++++......+ .+|.+++..||++||+
T Consensus         1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~-~~~~~~a~~LP~~Cgv   63 (63)
T cd00010           1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLG-LKNATRALALPAACGL   63 (63)
T ss_pred             CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCccccccC-cccHHHHHhchHhcCC
Confidence            57999999987778999999999999988999999999986432222 2279999999999996

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.

>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.34  E-value=7.4e-13  Score=94.26  Aligned_cols=62  Identities=31%  Similarity=0.687  Sum_probs=53.9

Q ss_pred             hccccCCHHHhcCCCCCCCHhHHHHHHHhhcCCCcccccccccCCCCCCCCCCCHHHHhhccccCCCCCC
Q 041699           36 LTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDAS  105 (203)
Q Consensus        36 l~~L~pCl~yv~g~~~~PS~~CC~alk~v~~~~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv~~p  105 (203)
                      ..+|.+|++|++++ ..|+.+||+.||+    +..|||+|+++   +.++..||.++|++|+++||+++|
T Consensus         3 ~~~L~~C~~ai~~~-~~Ps~~CC~~Lk~----~~~CLC~y~~~---p~l~~~i~~~~A~~l~~~Cgv~~P   64 (66)
T cd01959           3 PTQLSPCLPAILGG-SPPSAACCAKLKE----QQSCLCQYAKN---PSLKQYVNSPNARKVLAACGVPYP   64 (66)
T ss_pred             hhhcccCHHHHhCC-CCCCHHHHHHHhc----CCCCeeeeecC---ccHHhhcCcHHHHHHHHHcCCCCC
Confidence            36899999999964 5799999999998    45999999987   456667999999999999999986

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp

>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

Probab=99.01  E-value=5.2e-10  Score=78.29  Aligned_cols=76  Identities=24%  Similarity=0.690  Sum_probs=58.7

Q ss_pred             hHhhhccccCCHHHhcCC--CCCCCHhHHHHHHHhhcCCCcccccccccCCCCCCC-CCCCHHHHhhccccCCCCCCCCC
Q 041699           32 CAEQLTNLASCIPFVSGT--AKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMG-LPINTTLALQMPAACNIDASVSS  108 (203)
Q Consensus        32 C~~~l~~L~pCl~yv~g~--~~~PS~~CC~alk~v~~~~~~CLC~~lk~~~~~~lg-~~in~trA~~LP~~Cgv~~p~s~  108 (203)
                      |...+..+.+|++|+++.  ...|+.+||++++.+.  +..|+|.+++........ ..++..++..||+.||+..+...
T Consensus         1 C~~~~~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~--~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~~~~~~~~   78 (79)
T smart00499        1 CGQVLLQLAPCLSYLTGGSPGAPPSQQCCSQLRGLN--SAQCRCLALRAAVLGILEIPGVNAQNAASLPSACGVPPPYTD   78 (79)
T ss_pred             ChhhhhhHHhhHHHHcCCCCCCCCchHHHHHHHHhc--ccCCcchhhhcccccccchhhhhHHHHHhhHHhcCCCCCCCC
Confidence            556667778999999976  4678999999999986  789999888874321110 02599999999999999886544


Q ss_pred             C
Q 041699          109 C  109 (203)
Q Consensus       109 C  109 (203)
                      |
T Consensus        79 C   79 (79)
T smart00499       79 C   79 (79)
T ss_pred             C
Confidence            4

>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]

Probab=98.61  E-value=9.3e-10  Score=80.79  Aligned_cols=70  Identities=27%  Similarity=0.786  Sum_probs=55.9

Q ss_pred             ccccCCHHHhcCCCCCCCHhHHHHHHHhhcCCCcccccccccCCCCC-----C---CCCCCHHHHhhccccCCCCCCCCC
Q 041699           37 TNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPS-----M---GLPINTTLALQMPAACNIDASVSS  108 (203)
Q Consensus        37 ~~L~pCl~yv~g~~~~PS~~CC~alk~v~~~~~~CLC~~lk~~~~~~-----l---g~~in~trA~~LP~~Cgv~~p~s~  108 (203)
                      ..+.+|..|+++....|+..||++|+++   +..|.|..|+......     .   ...++..+|..||+.||+..+.++
T Consensus        13 ~~l~~c~~~~~~~~~~~~~~CC~~L~~l---~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~~~~~~   89 (90)
T PF00234_consen   13 VRLSPCLPYLQGGCQQPSQQCCQQLRQL---DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVSPPYTD   89 (90)
T ss_dssp             SHHHGGHHHHTTSSSHHHHHHHHHHHHH---HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSSSSSS-
T ss_pred             ccccccHHHHhcccccchHHHhHHHHHH---hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            4588999999987668999999999999   9999998888642110     0   025889999999999999997655


Q ss_pred             C
Q 041699          109 C  109 (203)
Q Consensus       109 C  109 (203)
                      |
T Consensus        90 C   90 (90)
T PF00234_consen   90 C   90 (90)
T ss_dssp             G
T ss_pred             C
Confidence            5

The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....

>PF14547 Hydrophob_seed: Hydrophobic seed protein

Probab=94.93  E-value=0.0064  Score=45.44  Aligned_cols=76  Identities=26%  Similarity=0.584  Sum_probs=52.7

Q ss_pred             hHhhhccccCCHHHhc----CCCCCCCHhHHHHHHHhhcCC-CcccccccccCCCCCCC-CCCCHHHHh-hccccCCCCC
Q 041699           32 CAEQLTNLASCIPFVS----GTAKKPTSECCQDTQKLKASK-PKCLCVLIKESTDPSMG-LPINTTLAL-QMPAACNIDA  104 (203)
Q Consensus        32 C~~~l~~L~pCl~yv~----g~~~~PS~~CC~alk~v~~~~-~~CLC~~lk~~~~~~lg-~~in~trA~-~LP~~Cgv~~  104 (203)
                      |.-...+|.-|...+.    ..+..+..+||.-++.+.+.+ ..|||..+|..   .+| +.+|....+ .|-..||-..
T Consensus         2 CP~d~lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~---vlg~i~~~ipv~l~~lln~CGk~~   78 (85)
T PF14547_consen    2 CPRDALKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKAN---VLGLINVNIPVALNLLLNACGKTV   78 (85)
T ss_pred             CCCcchhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhh---cccccccccccHHHHHHHHhCCcC
Confidence            4444456778888772    113347788999999987754 79999988864   466 555555555 4668899887


Q ss_pred             C-CCCCC
Q 041699          105 S-VSSCP  110 (203)
Q Consensus       105 p-~s~C~  110 (203)
                      | .++|.
T Consensus        79 p~gf~C~   85 (85)
T PF14547_consen   79 PSGFTCP   85 (85)
T ss_pred             cCCCcCC
Confidence            4 67774

>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

Probab=93.63  E-value=0.05  Score=40.73  Aligned_cols=75  Identities=24%  Similarity=0.523  Sum_probs=51.8

Q ss_pred             hHhhhccccCCHHHhcC----CCCCCCHhHHHHHHHhhcC-CCcccccccccCCCCCCCCCCCHHHHhh-ccccCCCCCC
Q 041699           32 CAEQLTNLASCIPFVSG----TAKKPTSECCQDTQKLKAS-KPKCLCVLIKESTDPSMGLPINTTLALQ-MPAACNIDAS  105 (203)
Q Consensus        32 C~~~l~~L~pCl~yv~g----~~~~PS~~CC~alk~v~~~-~~~CLC~~lk~~~~~~lg~~in~trA~~-LP~~Cgv~~p  105 (203)
                      |.-.-.+|..|..-+..    .+..|..+||.-++.+.+- -..|+|..+|..   .+|+.+|....+. +-..||-..|
T Consensus         4 CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan---~lgi~~~~pv~l~llln~CGk~~P   80 (85)
T cd01958           4 CPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKAN---ILGISINIPVALSLLLNSCGRNVP   80 (85)
T ss_pred             CCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeecc---ccCcccccChhHHHHHHHHcCcCC
Confidence            55444566777776632    1345778999999998775 489999999863   5777666666665 4467998875


Q ss_pred             -CCCC
Q 041699          106 -VSSC  109 (203)
Q Consensus       106 -~s~C  109 (203)
                       .+.|
T Consensus        81 ~gf~C   85 (85)
T cd01958          81 PGFTC   85 (85)
T ss_pred             CCCcC
Confidence             4555

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset

>cd00261 AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins

Probab=85.60  E-value=0.22  Score=37.67  Aligned_cols=69  Identities=22%  Similarity=0.561  Sum_probs=44.8

Q ss_pred             cccCCHHHhcCCC---C-----------CCCHhHHHHHHHhhcCCCcccccccccCCCCCC-----------C--CCCCH
Q 041699           38 NLASCIPFVSGTA---K-----------KPTSECCQDTQKLKASKPKCLCVLIKESTDPSM-----------G--LPINT   90 (203)
Q Consensus        38 ~L~pCl~yv~g~~---~-----------~PS~~CC~alk~v~~~~~~CLC~~lk~~~~~~l-----------g--~~in~   90 (203)
                      .|.+|..||....   .           ..-..||+.++.+   ...|.|..|........           +  ...-.
T Consensus        14 ~L~~C~~yl~qq~~~~~~~~~~~~~~~~~~~qqCCqqL~~i---~~qcrC~al~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (110)
T cd00261          14 PLNSCREYLRQQCSGVGGPPVWPQQSCEVLRQQCCQQLAQI---PEQCRCEALRQMVQGVIQQQQQQQEQQQGQEVERMR   90 (110)
T ss_pred             cCcHHHHHHHHhccCCCCCCCcCccccHHHHHHHHHHHHhC---cHhhhHHHHHHHHHHHHHhhhccccccCcChHHHHH
Confidence            5789999986221   1           1236799999999   88999988863221100           0  01334


Q ss_pred             HHHhhccccCCCCCCCCCCC
Q 041699           91 TLALQMPAACNIDASVSSCP  110 (203)
Q Consensus        91 trA~~LP~~Cgv~~p~s~C~  110 (203)
                      ..|..||..||+.. ...|.
T Consensus        91 ~~a~~Lp~~C~~~~-~~~C~  109 (110)
T cd00261          91 QAAQNLPSMCNLYP-PPYCP  109 (110)
T ss_pred             HHHHhhchhcCCCC-CCCCC
Confidence            57889999999986 33464

They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=80.94  E-value=1.3  Score=33.64  Aligned_cols=19  Identities=16%  Similarity=0.308  Sum_probs=8.7

Q ss_pred             CCCchHHHHHHHHHHHHHH
Q 041699            1 MGRDKMMIIFCIVMASLAM   19 (203)
Q Consensus         1 Ma~~~~~~~v~lvv~llv~   19 (203)
                      |++++.+++.++++++|++
T Consensus         1 MaSK~~llL~l~LA~lLli   19 (95)
T PF07172_consen    1 MASKAFLLLGLLLAALLLI   19 (95)
T ss_pred             CchhHHHHHHHHHHHHHHH
Confidence            8854444443333333333

Some of them may be involved in resistance to environmental stress [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	203
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	2e-08
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	5e-05
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	5e-05
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	2e-04
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	3e-04
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	5e-04
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	5e-04
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	8e-04

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A* Length = 93

 Score = 49.5 bits (118), Expect = 2e-08
 Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 7/80 (8%)

Query: 32  CAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKA-----SKPKCLCVLIKESTDPSMGL 86
           C +  + +A CI +  G    P++ CC   + L       +  +  C  +K +     G 
Sbjct: 4   CGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSG- 62

Query: 87  PINTTLALQMPAACNIDASV 106
            +N   A  +P+ C +    
Sbjct: 63  -LNAGNAASIPSKCGVSIPY 81

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A* Length = 90

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 8/80 (10%)

Query: 32  CAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKA-----SKPKCLCVLIKESTDPSMGL 86
           C    + +  C+ +V G    P+ +CC   + L       S  +  C  +K         
Sbjct: 3   CGHVDSLVRPCLSYVQGGP-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHN- 60

Query: 87  PINTTLALQMPAACNIDASV 106
            +N   A  +P  C ++   
Sbjct: 61  -LNEDNARSIPPKCGVNLPY 79

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var} Length = 91

 Score = 39.5 bits (92), Expect = 5e-05
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 8/80 (10%)

Query: 32  CAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKA-----SKPKCLCVLIKESTDPSMGL 86
           C +   NLA CI F+      P   CC   + +       +  + +C  +K +     G 
Sbjct: 3   CGQVQGNLAQCIGFLQKGGVVP-PSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRG- 60

Query: 87  PINTTLALQMPAACNIDASV 106
            IN   A  +P  C ++   
Sbjct: 61  -INPNNAEALPGKCGVNIPY 79

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum} Length = 91

 Score = 37.9 bits (88), Expect = 2e-04
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 9/80 (11%)

Query: 32  CAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKA-----SKPKCLCVLIKESTDPSMGL 86
           C +  +NLA C+ ++  T   P   CC   + L          +  C  +K +     G 
Sbjct: 4   CGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISG- 60

Query: 87  PINTTLALQMPAACNIDASV 106
            IN   A  +P+ C ++   
Sbjct: 61  -INLGKAAGLPSTCGVNIPY 79

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana} Length = 77

 Score = 37.4 bits (86), Expect = 3e-04
 Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 6/72 (8%)

Query: 32  CAEQLTNLASCIPFVSGTA-KKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINT 90
           C      L  C P VS      P+  CC     L+ +   CLC         S G  ++ 
Sbjct: 5   CGMSQDELNECKPAVSKENPTSPSQPCC---TALQHADFACLCGYKNSPWLGSFG--VDP 59

Query: 91  TLALQMPAACNI 102
            LA  +P  C +
Sbjct: 60  ELASALPKQCGL 71

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1 Length = 69

 Score = 36.4 bits (84), Expect = 5e-04
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)

Query: 37  TNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQM 96
             L  C   ++G A+ PT+ CC     L+A +  C C   K   DP  G  +N+  A + 
Sbjct: 6   GQLTVCTGAIAGGAR-PTAACC---SSLRAQQG-CFCQFAK---DPRYGRYVNSPNARKA 57

Query: 97  PAACNI 102
            ++C I
Sbjct: 58  VSSCGI 63

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A* Length = 92

 Score = 36.7 bits (85), Expect = 5e-04
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 8/76 (10%)

Query: 32  CAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKA-----SKPKCLCVLIKESTDPSMGL 86
           C +  ++LA CIP+V G        CC   + +          +  C  +K+ +    G 
Sbjct: 4   CGQVSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPG- 61

Query: 87  PINTTLALQMPAACNI 102
            +N   A  +P  C +
Sbjct: 62  -VNPNNAAALPGKCGV 76

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A* Length = 67

 Score = 35.6 bits (82), Expect = 8e-04
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)

Query: 37  TNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQM 96
           + LA C   +   AK P+ ECC     L+A +  C C   K   DP+ G  I +  A   
Sbjct: 5   SQLAVCASAILSGAK-PSGECC---GNLRAQQG-CFCQYAK---DPTYGQYIRSPHARDT 56

Query: 97  PAACNI 102
             +C +
Sbjct: 57  LTSCGL 62

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	203
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	99.56
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	99.55
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	99.54
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	99.52
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	99.52
2ljo_A	93	Non-specific lipid-transfer protein 2; lipid trans	99.49
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	99.4
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	99.38
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	99.35
3ob4_A	500	Conglutin, maltose ABC transporter periplasmic pro	94.92
1s6d_A	103	Albumin 8; all helix, folded LEAF, right-handed su	93.79
1hyp_A	80	Hydrophobic protein from soybean; hydrophobic SEED	93.17
1sm7_A	109	Recombinant IB pronapin; all alpha-helix, right-ha	90.48
1psy_A	125	2S albumin, RICC3; albumin SEED protein, SEED stor	90.45
1w2q_A	127	Conglutin, ARA H 6; allergen, allergene; NMR {Arac	89.22
1b1u_A	122	Protein (alpha-amylase/trypsin inhibitor RATI); bi	88.88
1hss_A	124	0.19 alpha-amylase inhibitor; cereal inhibitor, an	88.02
1pnb_B	75	Napin BNIB; napin IA and IB, albumin SEED protein,	84.17
2ds2_B	72	Sweet protein mabinlin-2 chain B; plant protein, S	84.17
1bea_A	127	Bifunctional amylase/serine protease inhibitor; am	81.03

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*

Probab=99.56  E-value=3.2e-16  Score=116.80  Aligned_cols=79  Identities=22%  Similarity=0.683  Sum_probs=65.6

Q ss_pred             cchHhhhccccCCHHHhcCCCCCCCHhHHHHHHHhhc-------CCCcccccccccCCCCCCCCCCCHHHHhhccccCCC
Q 041699           30 QECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKA-------SKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNI  102 (203)
Q Consensus        30 ~~C~~~l~~L~pCl~yv~g~~~~PS~~CC~alk~v~~-------~~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv  102 (203)
                      .+|+.++..|.||++|++|++..|+.+||++++++++       ++..|+|  ++... ..++ +||.++|+.||++||+
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC--~~~~~-~~~~-~in~~~A~~LP~~C~v   77 (93)
T 1afh_A            2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAA-AGVS-GLNAGNAASIPSKCGV   77 (93)
T ss_dssp             CSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHH--HHHHH-TTST-TCCHHHHHHHHHHHHC
T ss_pred             CChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEe--ecccc-cccc-CcCHHHHHHHHHHcCC
Confidence            4699999999999999998777799999999999973       3578999  44332 2354 7999999999999999


Q ss_pred             CCC-----CCCCCCc
Q 041699          103 DAS-----VSSCPKL  112 (203)
Q Consensus       103 ~~p-----~s~C~~~  112 (203)
                      +.|     .+||+++
T Consensus        78 ~~p~~is~~~dC~~v   92 (93)
T 1afh_A           78 SIPYTISTSTDCSRV   92 (93)
T ss_dssp             CCSSCCSTTCCSSSC
T ss_pred             CCCCCCCCCCCCccC
Confidence            974     6899876

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*

Probab=99.55  E-value=4.2e-16  Score=115.60  Aligned_cols=77  Identities=21%  Similarity=0.640  Sum_probs=64.1

Q ss_pred             chHhhhccccCCHHHhcCCCCCCCHhHHHHHHHhhc-------CCCcccccccccCCCCCCCCCCCHHHHhhccccCCCC
Q 041699           31 ECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKA-------SKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNID  103 (203)
Q Consensus        31 ~C~~~l~~L~pCl~yv~g~~~~PS~~CC~alk~v~~-------~~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv~  103 (203)
                      +|+++...|.||++|+++++. |+.+||++++++++       ++..|+|  +++.. ..++ +||.++|+.||++||++
T Consensus         2 ~C~~v~~~L~pCl~y~~~~~~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClC--lk~~~-~~~~-~in~~~A~~LP~~C~v~   76 (90)
T 1bwo_A            2 DCGHVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNC--LKGIA-RGIH-NLNEDNARSIPPKCGVN   76 (90)
T ss_dssp             CHHHHHHHHGGGHHHHTTCSC-CCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHHHH-TTCT-TCCHHHHHTHHHHHTCC
T ss_pred             CHHHHHHhhcccHHHHcCCCC-CCHHHhHHHHHHHhhccCCCCCCccCcC--ccCch-hccC-CcCHHHHHHHHHHcCCC
Confidence            599999999999999998776 99999999999874       3579999  66542 2344 79999999999999999


Q ss_pred             CC-----CCCCCCc
Q 041699          104 AS-----VSSCPKL  112 (203)
Q Consensus       104 ~p-----~s~C~~~  112 (203)
                      .|     .+||+++
T Consensus        77 ~p~~is~~~dC~~v   90 (90)
T 1bwo_A           77 LPYTISLNIDCSRV   90 (90)
T ss_dssp             CSSCCCTTCCGGGC
T ss_pred             CCCCCCCCCCCCCC
Confidence            74     5788763

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*

Probab=99.54  E-value=3.7e-16  Score=116.23  Aligned_cols=78  Identities=23%  Similarity=0.620  Sum_probs=65.3

Q ss_pred             cchHhhhccccCCHHHhcCCCCCCCHhHHHHHHHhh-------cCCCcccccccccCCCCCCCCCCCHHHHhhccccCCC
Q 041699           30 QECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLK-------ASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNI  102 (203)
Q Consensus        30 ~~C~~~l~~L~pCl~yv~g~~~~PS~~CC~alk~v~-------~~~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv  102 (203)
                      .+|+.+...|.||++|+++++ .|+.+||+++++++       +++..|+|.+...   +.++ +||.++|+.||++||+
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~-~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~---~~~~-~in~~~A~~LP~~Cgv   76 (92)
T 2alg_A            2 ITCGQVSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLS---ASVP-GVNPNNAAALPGKCGV   76 (92)
T ss_dssp             CCHHHHHHHHGGGHHHHHHCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHH---HHST-TCCHHHHHHHHHHTTC
T ss_pred             CChHHHHHhccCcHHHHcCCC-CCCHHHHHHHHHHHhhhcccCCCCcCCccccCcc---cccC-ccChHHHHHHHHHcCC
Confidence            469999999999999999765 58899999999987       5568999965433   3455 7999999999999999


Q ss_pred             CCC-----CCCCCCc
Q 041699          103 DAS-----VSSCPKL  112 (203)
Q Consensus       103 ~~p-----~s~C~~~  112 (203)
                      +.|     .+||+++
T Consensus        77 ~~p~~is~~~dC~~v   91 (92)
T 2alg_A           77 SIPYKISASTNCATV   91 (92)
T ss_dssp             CCSSCSSTTSCGGGC
T ss_pred             CCCCCCCCCCCCccC
Confidence            974     6789875

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}

Probab=99.52  E-value=9.1e-16  Score=113.90  Aligned_cols=77  Identities=23%  Similarity=0.603  Sum_probs=64.1

Q ss_pred             chHhhhccccCCHHHhcCCCCCCCHhHHHHHHHhhc-------CCCcccccccccCCCCCCCCCCCHHHHhhccccCCCC
Q 041699           31 ECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKA-------SKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNID  103 (203)
Q Consensus        31 ~C~~~l~~L~pCl~yv~g~~~~PS~~CC~alk~v~~-------~~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv~  103 (203)
                      +|+.+...|.||++|+++++. |+.+||++++++++       ++..|+|  +++.. ..++ +||.++|+.||++||++
T Consensus         2 ~C~~v~~~L~pCl~yv~~~~~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC--~k~~~-~~~~-~in~~~A~~LP~~Cgv~   76 (91)
T 1siy_A            2 TCGQVQGNLAQCIGFLQKGGV-VPPSCCTGVKNILNSSRTTADRRAVCSC--LKAAA-GAVR-GINPNNAEALPGKCGVN   76 (91)
T ss_dssp             CTTTTHHHHHHHHHHHTSCSC-CCHHHHHHHHHHHTTTCSSHHHHHHHHH--HHHHT-TCCS-SCCHHHHHHHHHHHTCC
T ss_pred             CHHHHHHhccCcHHHHhCCCC-CcHHHHHHHHHHHhhhccCCCCCcCCcc--cCCcc-cccC-CcCHHHHHHHHHHcCCC
Confidence            589999999999999998765 99999999999874       3568999  56542 3444 79999999999999998


Q ss_pred             CC-----CCCCCCc
Q 041699          104 AS-----VSSCPKL  112 (203)
Q Consensus       104 ~p-----~s~C~~~  112 (203)
                      .|     .+||+++
T Consensus        77 ~p~~is~~~dC~~v   90 (91)
T 1siy_A           77 IPYKISTSTNCNSI   90 (91)
T ss_dssp             CSSCSCTTSCSSTT
T ss_pred             CCCCCCCCCCCccC
Confidence            74     6899875

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}

Probab=99.52  E-value=8.9e-16  Score=114.11  Aligned_cols=77  Identities=26%  Similarity=0.644  Sum_probs=64.7

Q ss_pred             cchHhhhccccCCHHHhcCCCCCCCHhHHHHHHHhhcC-------CCcccccccccCCCCCCCCCCCHHHHhhccccCCC
Q 041699           30 QECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKAS-------KPKCLCVLIKESTDPSMGLPINTTLALQMPAACNI  102 (203)
Q Consensus        30 ~~C~~~l~~L~pCl~yv~g~~~~PS~~CC~alk~v~~~-------~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv  102 (203)
                      .+|+.+...|.||++|++|++. |+ .||++++++++.       +..|+|  +++.. ..++ +||.++|+.||++||+
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~~-P~-~CC~gv~~l~~~a~t~~dr~~~ClC--lk~~~-~~~~-~in~~~A~~LP~~C~v   75 (91)
T 1t12_A            2 ITCGQVTSNLAPCLAYLRNTGP-LG-RCCGGVKALVNSARTTEDRQIACTC--LKSAA-GAIS-GINLGKAAGLPSTCGV   75 (91)
T ss_dssp             CCHHHHHHHTHHHHHHHTTSSC-CT-THHHHHHHHHHTTCSTHHHHHHHHH--HHHHH-HHCT-TCCHHHHHHHHHHTTC
T ss_pred             CChHHHHHhccCcHHHHcCCCC-hH-HHHHHHHHHHhhccCCCCCCccCCC--ccccc-cccC-CcChhHHHHHHHHcCC
Confidence            4699999999999999998777 88 999999999763       689999  55432 2355 7999999999999999


Q ss_pred             CCC-----CCCCCCc
Q 041699          103 DAS-----VSSCPKL  112 (203)
Q Consensus       103 ~~p-----~s~C~~~  112 (203)
                      +.|     .+||+++
T Consensus        76 ~~p~~is~~~dC~~v   90 (91)
T 1t12_A           76 NIPYKISPSTDCSKV   90 (91)
T ss_dssp             CCSSCSSSSSCCTTC
T ss_pred             CCCCCCCCCCCCccC
Confidence            974     6899875

>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}

Probab=99.49  E-value=2.1e-15  Score=112.71  Aligned_cols=80  Identities=23%  Similarity=0.608  Sum_probs=66.8

Q ss_pred             cchHhhhccccCCHHHhcCCCCCCCHhHHHHHHHhhcC-----CCcccccccccCCCCCCCCCCCHHHHhhccccCCCCC
Q 041699           30 QECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKAS-----KPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDA  104 (203)
Q Consensus        30 ~~C~~~l~~L~pCl~yv~g~~~~PS~~CC~alk~v~~~-----~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv~~  104 (203)
                      .+|.+++..|.||++||+|+. .|+..||++++++++.     +..|+|..|++...  ...+||.+||..||.+||++.
T Consensus         2 isC~~v~~~L~pCl~Yv~g~~-~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~--~~~~in~~~a~~LP~~CgV~~   78 (93)
T 2ljo_A            2 ISCGAVTSDLSPCLTYLTGGP-GPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAG--SITKLNTNNAAALPGKCGVNI   78 (93)
T ss_dssp             CSSHHHHHHHHHHHHHHTTSS-CCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGG--GCTTCCHHHHHHHHHHHTCCC
T ss_pred             CCHHHHHHHHHhHHHHHcCCC-CCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhh--ccCCcCHHHHHhhhHhcCCCC
Confidence            469999999999999999854 6999999999999763     45788888988642  234799999999999999998


Q ss_pred             C-----CCCCCCc
Q 041699          105 S-----VSSCPKL  112 (203)
Q Consensus       105 p-----~s~C~~~  112 (203)
                      |     .+||+++
T Consensus        79 p~~Is~~~dC~~v   91 (93)
T 2ljo_A           79 PYKISTTTNCNTV   91 (93)
T ss_dssp             SSCCSTTCCGGGC
T ss_pred             CCCCCCCCCCCCC
Confidence            5     5789876

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}

Probab=99.40  E-value=8.8e-15  Score=105.22  Aligned_cols=71  Identities=25%  Similarity=0.523  Sum_probs=59.0

Q ss_pred             cchHhhhccccCCHHHhcC-CCCCCCHhHHHHHHHhhcCCCcccccccccCCCCCCCCCCCHHHHhhccccCCCCCC
Q 041699           30 QECAEQLTNLASCIPFVSG-TAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDAS  105 (203)
Q Consensus        30 ~~C~~~l~~L~pCl~yv~g-~~~~PS~~CC~alk~v~~~~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv~~p  105 (203)
                      .+|..++.+|.||++|+++ ....|+.+||+++|+.   +..|||.++++.....  ++||.++|+.||++||+++|
T Consensus         3 ~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~---~~~ClC~~~~~~~~~~--~gin~~~A~~LP~~Cgv~~p   74 (77)
T 2rkn_A            3 DLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHA---DFACLCGYKNSPWLGS--FGVDPELASALPKQCGLANA   74 (77)
T ss_dssp             CBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTC---CHHHHHTTTTCHHHHH--HTBCHHHHHHHHHHTTCSCC
T ss_pred             chHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhc---CcCCcCcccCCcchhh--cCcCHHHHHHHHHHcCCCCC
Confidence            5699999999999999997 3467999999999984   6799998887521122  35999999999999999985

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*

Probab=99.38  E-value=3.6e-14  Score=99.87  Aligned_cols=62  Identities=24%  Similarity=0.574  Sum_probs=53.6

Q ss_pred             hccccCCHHHhcCCCCCCCHhHHHHHHHhhcCCCcccccccccCCCCCCCCCCCHHHHhhccccCCCCCC
Q 041699           36 LTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDAS  105 (203)
Q Consensus        36 l~~L~pCl~yv~g~~~~PS~~CC~alk~v~~~~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv~~p  105 (203)
                      ..+|.||++||+++ ..|+.+||++||+    +..|+|+|+++.   .++..||.++|++||++||+++|
T Consensus         4 ~~~L~pC~~~v~~~-~~Ps~~CC~~lk~----~~~ClC~~~k~~---~~~~~in~~~A~~Lp~~Cgv~~P   65 (67)
T 1n89_A            4 ASQLAVCASAILSG-AKPSGECCGNLRA----QQGCFCQYAKDP---TYGQYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             SSTTHHHHHHHTTC-CCCCHHHHHHHHH----HSSHHHHGGGCS---TTHHHHTCHHHHHHHHHHTSCCS
T ss_pred             hhhcccCHHHHcCC-CCCCHHHHHhhCC----CCCCCCccccCc---ccccccCHHHHHHHHHHcCCCCC
Confidence            36789999999975 4699999999998    479999999974   45546999999999999999987

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1

Probab=99.35  E-value=4.4e-14  Score=99.95  Aligned_cols=65  Identities=25%  Similarity=0.623  Sum_probs=55.2

Q ss_pred             hccccCCHHHhcCCCCCCCHhHHHHHHHhhcCCCcccccccccCCCCCCCCCCCHHHHhhccccCCCCCCCCCCC
Q 041699           36 LTNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDASVSSCP  110 (203)
Q Consensus        36 l~~L~pCl~yv~g~~~~PS~~CC~alk~v~~~~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv~~p~s~C~  110 (203)
                      ..+|.||++||+++ ..|+.+||++||+    +..|+|+|+++.   .++.+||.++|++||++||+++|  +|+
T Consensus         5 ~~~L~pC~~~v~~~-~~Ps~~CC~~lk~----~~~ClC~~~k~~---~~~~~in~~~A~~Lp~~Cgv~~P--~C~   69 (69)
T 1l6h_A            5 AGQLTVCTGAIAGG-ARPTAACCSSLRA----QQGCFCQFAKDP---RYGRYVNSPNARKAVSSCGIALP--TCH   69 (69)
T ss_dssp             TTTHHHHHHHHTTC-CSTTHHHHHHHHH----HHHHHHHHTTCS---SHHHHTTTTTGGGCCCCCSSCSC--CCC
T ss_pred             hhhcccCHHHHcCC-CCCCHHHHHhhCC----CCCCCCccccCc---ccccccCHHHHHHHHHHcCCCCC--CCC
Confidence            36789999999975 4699999999998    479999999973   45446999999999999999987  664

>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}

Probab=94.92  E-value=0.00084  Score=61.30  Aligned_cols=54  Identities=17%  Similarity=0.588  Sum_probs=37.1

Q ss_pred             HhHHHHHHHhhcCCCcccccccccCCCCCC----CC----CCCHHHHhhccccCCCCCCCCCCCC
Q 041699           55 SECCQDTQKLKASKPKCLCVLIKESTDPSM----GL----PINTTLALQMPAACNIDASVSSCPK  111 (203)
Q Consensus        55 ~~CC~alk~v~~~~~~CLC~~lk~~~~~~l----g~----~in~trA~~LP~~Cgv~~p~s~C~~  111 (203)
                      .+||+.|+++- .++.|.|..|+.......    +.    .+ ..+|..||..||+.. +..|.-
T Consensus       429 ~~cc~~l~~~~-~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~p~~c~~~~-~~~c~~  490 (500)
T 3ob4_A          429 ERCCNELNEFE-NNQRCMCEALQQIMENQSDRLQGRQQEQQF-KRELRNLPQQCGLRA-PQRCDL  490 (500)
T ss_dssp             HHHHHHHGGGT-TCHHHHHHHHHHHHHHHHTTCCSSHHHHHH-HHHHHTHHHHTTCCC-CSCCCC
T ss_pred             HHHHHHHHhCC-cccccccHHHHHHHHHHHHHhhhHHHHHHH-HHHHhhCchhcCCCC-CccCCc
Confidence            68999999981 118999988876432111    10    12 356999999999984 367883

>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3

Probab=93.79  E-value=0.036  Score=41.47  Aligned_cols=74  Identities=23%  Similarity=0.513  Sum_probs=52.0

Q ss_pred             cccchHhhh--cc-ccCCHHHhcCCC------------CCCCHhHHHHHHHhhcCCCcccccccccCCCCCCCC---CCC
Q 041699           28 DEQECAEQL--TN-LASCIPFVSGTA------------KKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGL---PIN   89 (203)
Q Consensus        28 ~~~~C~~~l--~~-L~pCl~yv~g~~------------~~PS~~CC~alk~v~~~~~~CLC~~lk~~~~~~lg~---~in   89 (203)
                      ....|...+  .. |.+|..||....            ...-..||+.|+.+   +..|.|..|+......++-   .-.
T Consensus         7 ~~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~---~~~CrC~al~~~~Q~q~~g~q~~~~   83 (103)
T 1s6d_A            7 TESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQV   83 (103)
T ss_dssp             CSSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHH
T ss_pred             CCcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc---CcccCcHHHHHHHHHHhcchhHHHH
Confidence            345698876  34 899999997321            12457899999998   8999998887654223321   122


Q ss_pred             HHHHhhccccCCCCC
Q 041699           90 TTLALQMPAACNIDA  104 (203)
Q Consensus        90 ~trA~~LP~~Cgv~~  104 (203)
                      ..+|..||..||+..
T Consensus        84 ~q~A~~LP~~C~i~p   98 (103)
T 1s6d_A           84 MSMAHNLPIECNLMS   98 (103)
T ss_dssp             HHHHHHHHHHTTSSS
T ss_pred             HHHHHhcHHhcCCCc
Confidence            456788999999964

>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1

Probab=93.17  E-value=0.015  Score=41.98  Aligned_cols=67  Identities=24%  Similarity=0.652  Sum_probs=50.4

Q ss_pred             cccCCHHHhcCCCCCCCHhHHHHHHHhhcC-CCcccccccccCCCCCCCCCCCHHHHhh-ccccCCCCCC-CCCCCC
Q 041699           38 NLASCIPFVSGTAKKPTSECCQDTQKLKAS-KPKCLCVLIKESTDPSMGLPINTTLALQ-MPAACNIDAS-VSSCPK  111 (203)
Q Consensus        38 ~L~pCl~yv~g~~~~PS~~CC~alk~v~~~-~~~CLC~~lk~~~~~~lg~~in~trA~~-LP~~Cgv~~p-~s~C~~  111 (203)
                      +|.-|.+-+.|.. .|...||.-++.+.+- -..|||..+|-     +|+ +|...++. |-..||-..| .++|..
T Consensus        10 kLgvCanvL~g~~-~~~~~CC~Ll~GL~dleAAvCLCtaik~-----Lgi-lnlpv~L~llln~Cgk~~P~gF~C~~   79 (80)
T 1hyp_A           10 DLSICLNILGGSL-GTVDDCCALIGGLGDIEAIVCLCIQLRA-----LGI-LNLNRNLQLILNSCGRSYPSNATCPR   79 (80)
T ss_dssp             CCGGGGGGGGTCC-TTHHHHHHHHHTSCHHHHHHHHHHHHHH-----HTC-SCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred             chhHHHHHhCcCC-CCCCccchhhhCcchhhhhhhhhhhccc-----cce-eecChhHHHHHHHhCCcCcCCCCCCC
Confidence            6788888776532 3667899999988664 47999988872     566 77777776 5578999985 788863

>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}

Probab=90.48  E-value=0.036  Score=41.61  Aligned_cols=76  Identities=20%  Similarity=0.618  Sum_probs=49.2

Q ss_pred             chHhhhcc---ccCCHHHhcCC----C--CCC---------CHhHHHHHHHhhcCCCcccccccccCCCC-----CCCC-
Q 041699           31 ECAEQLTN---LASCIPFVSGT----A--KKP---------TSECCQDTQKLKASKPKCLCVLIKESTDP-----SMGL-   86 (203)
Q Consensus        31 ~C~~~l~~---L~pCl~yv~g~----~--~~P---------S~~CC~alk~v~~~~~~CLC~~lk~~~~~-----~lg~-   86 (203)
                      .|...+..   |.+|..||...    .  ..|         -..||+.|+.+   +..|.|..|+.....     .++- 
T Consensus         4 ~C~~q~q~~q~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v---~~qCrC~al~~~v~~~~~qgq~~~~   80 (109)
T 1sm7_A            4 KCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPF   80 (109)
T ss_dssp             HHHTTHHHHCCCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTT---CHHHHTTTTHHHHHTSSCSSCCCTT
T ss_pred             hhHHHHHcCccHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhc---CccCCCHHHHHHHHHHHHhcccchH
Confidence            47766554   89999999721    1  111         25799999998   899999888653211     1110 


Q ss_pred             --CCCHHHHhhccccCCCCCCCCCCC
Q 041699           87 --PINTTLALQMPAACNIDASVSSCP  110 (203)
Q Consensus        87 --~in~trA~~LP~~Cgv~~p~s~C~  110 (203)
                        .-...+|..||..||+..+ ..|.
T Consensus        81 ~~~~~~~~a~~LP~~Cnl~~~-~~C~  105 (109)
T 1sm7_A           81 QSTRIYQIAKNLPNVCNMKQI-GTCP  105 (109)
T ss_dssp             HHHHHHHTTSSHHHHSCCCSS-CSSC
T ss_pred             HHHHHHHHHHhCHHhcCCCCC-CCCC
Confidence              0123447789999999743 4565

>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3

Probab=90.45  E-value=0.098  Score=40.43  Aligned_cols=70  Identities=21%  Similarity=0.585  Sum_probs=48.5

Q ss_pred             cchHhhh--ccccCCHHHhcCC---CC-------CC-----------CHhHHHHHHHhhcCCCcccccccccCC-----C
Q 041699           30 QECAEQL--TNLASCIPFVSGT---AK-------KP-----------TSECCQDTQKLKASKPKCLCVLIKEST-----D   81 (203)
Q Consensus        30 ~~C~~~l--~~L~pCl~yv~g~---~~-------~P-----------S~~CC~alk~v~~~~~~CLC~~lk~~~-----~   81 (203)
                      ..|...+  ..|.+|..||...   ..       .|           -..||..|+.+   ++.|.|..|+..+     .
T Consensus        16 q~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~---~~~C~C~aL~~~v~~~~qQ   92 (125)
T 1psy_A           16 QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQ   92 (125)
T ss_dssp             SSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhc---CcccccHHHHHHHHHHHHH
Confidence            4698876  4699999999742   10       12           25799999998   9999998886543     1


Q ss_pred             CCC-CCC--CCHHHHhhccccCCC
Q 041699           82 PSM-GLP--INTTLALQMPAACNI  102 (203)
Q Consensus        82 ~~l-g~~--in~trA~~LP~~Cgv  102 (203)
                      ..+ +-.  --..+|..||..||+
T Consensus        93 gq~~gqq~~~~~q~A~~LP~~C~i  116 (125)
T 1psy_A           93 GQLHGEESERVAQRAGEIVSSCGV  116 (125)
T ss_dssp             TTCCTTCSHHHHHHHHHHHHHHTC
T ss_pred             hhhhHHHHHHHHHHHHhhHHHcCC
Confidence            112 211  123567889999999

>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}

Probab=89.22  E-value=0.099  Score=40.57  Aligned_cols=81  Identities=20%  Similarity=0.541  Sum_probs=53.4

Q ss_pred             cccchHhhh--ccccCCHHHhcCCC---C-------CC-------CHhHHHHHHHhhcCCCcccccccccCC----CCCC
Q 041699           28 DEQECAEQL--TNLASCIPFVSGTA---K-------KP-------TSECCQDTQKLKASKPKCLCVLIKEST----DPSM   84 (203)
Q Consensus        28 ~~~~C~~~l--~~L~pCl~yv~g~~---~-------~P-------S~~CC~alk~v~~~~~~CLC~~lk~~~----~~~l   84 (203)
                      ....|...+  ..|.+|..||....   .       .-       -..||..|+.+. +++.|.|..|+...    ...-
T Consensus        12 ~~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~-~~~qCrCeaL~q~~Q~qq~q~~   90 (127)
T 1w2q_A           12 DSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQ   90 (127)
T ss_dssp             TTCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTS-CCCTTHHHHHHHHHHHSCTTTT
T ss_pred             cccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhc-cCCCccCHHHHHHHHHHHhhhh
Confidence            345698875  46999999997321   0       01       267999999963 46899998887653    1111


Q ss_pred             CCCCC---HHHHhhccccCCCCCCCCCCC
Q 041699           85 GLPIN---TTLALQMPAACNIDASVSSCP  110 (203)
Q Consensus        85 g~~in---~trA~~LP~~Cgv~~p~s~C~  110 (203)
                      +-...   ..+|..||..||+..+ ..|.
T Consensus        91 gqq~~~~~~q~A~~LP~~C~i~~~-~~C~  118 (127)
T 1w2q_A           91 DRQMVQQFKRELMSLPQQCNFRAP-QRCD  118 (127)
T ss_dssp             TSTTHHHHHHHHHHHHHHHTCCCS-SCCS
T ss_pred             hHHHHHHHHHHHHHhHHhcCCCCC-CcCC
Confidence            22222   3568899999999543 4566

>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B

Probab=88.88  E-value=0.044  Score=42.40  Aligned_cols=72  Identities=24%  Similarity=0.511  Sum_probs=46.0

Q ss_pred             cccCCHHHhcCC----CC-CC----CHhHHHHHHHhhcCCCcccccccccCCCCCC-------C--CC-C-------CHH
Q 041699           38 NLASCIPFVSGT----AK-KP----TSECCQDTQKLKASKPKCLCVLIKESTDPSM-------G--LP-I-------NTT   91 (203)
Q Consensus        38 ~L~pCl~yv~g~----~~-~P----S~~CC~alk~v~~~~~~CLC~~lk~~~~~~l-------g--~~-i-------n~t   91 (203)
                      .|..|..||...    +. .|    -..||+.|+++   +..|.|..|....+..+       |  +. +       -..
T Consensus        16 ~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~   92 (122)
T 1b1u_A           16 PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRA   92 (122)
T ss_dssp             TTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHS---CHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHH
T ss_pred             cchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhC---CccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHH
Confidence            477899999632    22 23    34699999999   89999977654332111       0  01 1       113


Q ss_pred             HHhhc--cccCCCCCC--CCCCCCc
Q 041699           92 LALQM--PAACNIDAS--VSSCPKL  112 (203)
Q Consensus        92 rA~~L--P~~Cgv~~p--~s~C~~~  112 (203)
                      .|..|  |..||+..+  ..-|..+
T Consensus        93 ~A~~Lv~P~~Cnl~~~~g~~~C~~~  117 (122)
T 1b1u_A           93 FAPKLVTEVECNLATIHGGPFCLSL  117 (122)
T ss_dssp             HGGGTTSTTTTCCCCTTSSSCCSSS
T ss_pred             HHHhcCCcccCCCCCCCCCcccccc
Confidence            57789  999999884  3456653

>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2

Probab=88.02  E-value=0.02  Score=44.54  Aligned_cols=65  Identities=22%  Similarity=0.495  Sum_probs=41.8

Q ss_pred             cccCCHHHhcCC---CCCC---CHhHHHHHHHhhcCCCcccccccccCCCC---CCC-------C-C-------CCHHHH
Q 041699           38 NLASCIPFVSGT---AKKP---TSECCQDTQKLKASKPKCLCVLIKESTDP---SMG-------L-P-------INTTLA   93 (203)
Q Consensus        38 ~L~pCl~yv~g~---~~~P---S~~CC~alk~v~~~~~~CLC~~lk~~~~~---~lg-------~-~-------in~trA   93 (203)
                      .|..|..||...   ...|   -..||+.|+++   ...|.|..|....+.   ..|       + .       +-...|
T Consensus        16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A   92 (124)
T 1hss_A           16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTA   92 (124)
T ss_dssp             CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS---CTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHH
T ss_pred             cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHH
Confidence            377899999632   1123   35799999998   899999776543210   011       0 0       112257


Q ss_pred             hhccccCCCCCC
Q 041699           94 LQMPAACNIDAS  105 (203)
Q Consensus        94 ~~LP~~Cgv~~p  105 (203)
                      ..||..||+..+
T Consensus        93 ~~LP~~Cnl~~~  104 (124)
T 1hss_A           93 ASITAVCRLPIV  104 (124)
T ss_dssp             TTHHHHTTCCEE
T ss_pred             HhchhhcCCCCC
Confidence            889999999875

>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3

Probab=84.17  E-value=0.25  Score=34.75  Aligned_cols=55  Identities=22%  Similarity=0.547  Sum_probs=37.9

Q ss_pred             CCCHhHHHHHHHhhcCCCcccccccccCCC-----CCCCCC---CCHHHHhhccccCCCCCCCCCCC
Q 041699           52 KPTSECCQDTQKLKASKPKCLCVLIKESTD-----PSMGLP---INTTLALQMPAACNIDASVSSCP  110 (203)
Q Consensus        52 ~PS~~CC~alk~v~~~~~~CLC~~lk~~~~-----~~lg~~---in~trA~~LP~~Cgv~~p~s~C~  110 (203)
                      ..-..||+.|+.+   ++.|.|..|+...+     ..++-.   -...+|..||..||+..+ ..|.
T Consensus         9 ~~~qqCC~qL~~~---~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~-~~C~   71 (75)
T 1pnb_B            9 WLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI-GTCP   71 (75)
T ss_dssp             SCTHHHHHHHHTS---CGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT-CCCC
T ss_pred             HHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC-CCCC
Confidence            4567899999998   89999988876421     112211   124567789999999653 5665

>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}

Probab=84.17  E-value=0.084  Score=37.06  Aligned_cols=52  Identities=23%  Similarity=0.655  Sum_probs=36.4

Q ss_pred             HhHHHHHHHhhcCCCcccccccccCCC-----CC-CCC---CCCHHHHhhccccCCCCCCCCCCC
Q 041699           55 SECCQDTQKLKASKPKCLCVLIKESTD-----PS-MGL---PINTTLALQMPAACNIDASVSSCP  110 (203)
Q Consensus        55 ~~CC~alk~v~~~~~~CLC~~lk~~~~-----~~-lg~---~in~trA~~LP~~Cgv~~p~s~C~  110 (203)
                      ..||+.|+.+   ++.|.|..|+....     .. ++-   .-...+|..||..||+..+ ..|.
T Consensus         8 qqCC~eL~~~---~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~-~~C~   68 (72)
T 2ds2_B            8 RQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI-GACP   68 (72)
T ss_dssp             HHHHHHHTTS---CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTC-CCCC
T ss_pred             HHHHHHHHhc---CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCC-CcCC
Confidence            5799999998   99999988876431     11 210   1235678899999999642 4565

>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A

Probab=81.03  E-value=0.93  Score=35.12  Aligned_cols=72  Identities=25%  Similarity=0.579  Sum_probs=46.4

Q ss_pred             cccCCHHHhcCC----CC-CC----CHhHHHHHHHhhcCCCcccccccccCCCCC---------CCC--CC-------CH
Q 041699           38 NLASCIPFVSGT----AK-KP----TSECCQDTQKLKASKPKCLCVLIKESTDPS---------MGL--PI-------NT   90 (203)
Q Consensus        38 ~L~pCl~yv~g~----~~-~P----S~~CC~alk~v~~~~~~CLC~~lk~~~~~~---------lg~--~i-------n~   90 (203)
                      .|..|..||...    +. .|    -..||+.|+++   ...|.|..|....+..         -|+  .+       -.
T Consensus        16 pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~   92 (127)
T 1bea_A           16 PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQR   92 (127)
T ss_dssp             CCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTS---CGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHH
T ss_pred             cchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHH
Confidence            367899999622    22 23    34599999999   8999997664432110         111  11       13


Q ss_pred             HHHhhc--cccCCCCCC--CCCCCCc
Q 041699           91 TLALQM--PAACNIDAS--VSSCPKL  112 (203)
Q Consensus        91 trA~~L--P~~Cgv~~p--~s~C~~~  112 (203)
                      ..|..|  |..||+..+  ...|..+
T Consensus        93 ~~A~~Lv~P~~Cnl~~~~g~~~C~~~  118 (127)
T 1bea_A           93 GFAATLVTEAECNLATISGVAECPWI  118 (127)
T ss_dssp             HHHTTTTSTTTTCCCCTTSSSCCTTT
T ss_pred             HHHHhcCCcccCCCCCCCCCCCCCcc
Confidence            357889  999999874  3478765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	203
d1mida_	91	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	1e-10
d1fk5a_	93	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	2e-10

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 91

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score = 53.7 bits (129), Expect = 1e-10
 Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 8/80 (10%)

Query: 32  CAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKA-----SKPKCLCVLIKESTDPSMGL 86
           C +  + +  C+ +V G    P+ ECC   + L          + +C  +K         
Sbjct: 3   CGQVDSKMKPCLTYVQGGP-GPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIA--RGIH 59

Query: 87  PINTTLALQMPAACNIDASV 106
            +N   A  +P+ CN++   
Sbjct: 60  NLNLNNAASIPSKCNVNVPY 79

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]} Length = 93

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

 Score = 53.3 bits (128), Expect = 2e-10
 Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 7/80 (8%)

Query: 32  CAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKA-----SKPKCLCVLIKESTDPSMGL 86
           C +  + +A CI +  G    P++ CC   + L       +  +  C  +K +   +   
Sbjct: 4   CGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAA--AGVS 61

Query: 87  PINTTLALQMPAACNIDASV 106
            +N   A  +P+ C +    
Sbjct: 62  GLNAGNAASIPSKCGVSIPY 81

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	203
d1fk5a_	93	Plant non-specific lipid-transfer protein (ns-LTP,	99.53
d1mida_	91	Plant non-specific lipid-transfer protein (ns-LTP,	99.46
d1tuka1	67	Non-specific lipid-transfer protein homologue (ns-	99.05
d1l6ha_	69	Non-specific lipid-transfer protein homologue (ns-	98.98
d1s6da_	103	Methionine-rich 2S protein (albumin 8) {Common sun	94.96
g1pnb.1	106	Napin BNIb {Rape (Brassica napus) [TaxId: 3708]}	92.92
d1psya_	125	2S albumin RicC3 {Castor bean (Ricinus communis) [	92.55
d1hypa_	75	Soybean hydrophobic protein {Soybean (Glycine max)	87.56

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

Probab=99.53  E-value=3.2e-16  Score=115.14  Aligned_cols=81  Identities=20%  Similarity=0.569  Sum_probs=67.9

Q ss_pred             cchHhhhccccCCHHHhcCCCCCCCHhHHHHHHHhhc-----CCCcccccccccCCCCCCCCCCCHHHHhhccccCCCCC
Q 041699           30 QECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKA-----SKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDA  104 (203)
Q Consensus        30 ~~C~~~l~~L~pCl~yv~g~~~~PS~~CC~alk~v~~-----~~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv~~  104 (203)
                      .+|.+++..|.||++||+|++..|+..||++++++++     .+..|+|+.|++...  ...+||.+|+..||++||++.
T Consensus         2 i~C~~v~~~l~pCl~Yltg~~~~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~~--~~~~in~~ra~~LP~~C~v~l   79 (93)
T d1fk5a_           2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAA--GVSGLNAGNAASIPSKCGVSI   79 (93)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCSSSCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHH--TCTTCCHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHhhhhHHHHhCCCCCCCCchhHHHHHHHHHccCCccHHHHHHhhhhccc--ccCCcCHHHHHhhhHhcCCCC
Confidence            4799999999999999999888899999999999976     245688877987532  234699999999999999987


Q ss_pred             C-----CCCCCCc
Q 041699          105 S-----VSSCPKL  112 (203)
Q Consensus       105 p-----~s~C~~~  112 (203)
                      +     .+||+++
T Consensus        80 ~~pis~~~dCs~i   92 (93)
T d1fk5a_          80 PYTISTSTDCSRV   92 (93)
T ss_dssp             SSCCSTTCCGGGC
T ss_pred             CCCCCCCCCCCcC
Confidence            4     6889876

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.46  E-value=2.7e-15  Score=109.77  Aligned_cols=79  Identities=22%  Similarity=0.578  Sum_probs=65.9

Q ss_pred             chHhhhccccCCHHHhcCCCCCCCHhHHHHHHHhhcC-----CCcccccccccCCCCCCCCCCCHHHHhhccccCCCCCC
Q 041699           31 ECAEQLTNLASCIPFVSGTAKKPTSECCQDTQKLKAS-----KPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDAS  105 (203)
Q Consensus        31 ~C~~~l~~L~pCl~yv~g~~~~PS~~CC~alk~v~~~-----~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv~~p  105 (203)
                      +|.+++..|.||++|++|+ ..|+..||++++++++.     +..|+|+.+++...  ...+||.+||..||.+||++.+
T Consensus         2 ~C~~v~~~l~pCl~Yl~g~-~~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~~--~~~~in~~ra~~LP~~C~v~~p   78 (91)
T d1mida_           2 NCGQVDSKMKPCLTYVQGG-PGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIAR--GIHNLNLNNAASIPSKCNVNVP   78 (91)
T ss_dssp             CHHHHHHHHGGGHHHHTTC-SCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHH--TCTTCCHHHHHHHHHHTTCCCC
T ss_pred             CHHHHHHHHHhhHHHHcCC-CCCCcchhhhHHHHHHHhcCCCcHHHHHHhhhhhcc--cCCCcCHHHHHhchHhcCCCCC
Confidence            6999999999999999986 46999999999999762     45788888987532  2346999999999999999874


Q ss_pred             -----CCCCCCc
Q 041699          106 -----VSSCPKL  112 (203)
Q Consensus       106 -----~s~C~~~  112 (203)
                           .+||+++
T Consensus        79 ~pis~~~dC~~i   90 (91)
T d1mida_          79 YTISPDIDCSRI   90 (91)
T ss_dssp             SCCCTTCCGGGC
T ss_pred             CCCCCCCCCCCC
Confidence                 5789876

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

Probab=99.05  E-value=1.1e-11  Score=85.63  Aligned_cols=61  Identities=28%  Similarity=0.644  Sum_probs=55.1

Q ss_pred             ccccCCHHHhcCCCCCCCHhHHHHHHHhhcCCCcccccccccCCCCCCCCCCCHHHHhhccccCCCCCC
Q 041699           37 TNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDAS  105 (203)
Q Consensus        37 ~~L~pCl~yv~g~~~~PS~~CC~alk~v~~~~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv~~p  105 (203)
                      .+|.+|++.++++. .|+.+||+.+|+    |..|||+|++|   +.+...||..+|.++.+.||+++|
T Consensus         5 ~~L~~C~~Ai~~g~-~PS~~CC~kLke----Q~~ClC~Y~kd---P~~~~yv~spnarkv~~aCgvp~P   65 (67)
T d1tuka1           5 SQLAVCASAILSGA-KPSGECCGNLRA----QQGCFCQYAKD---PTYGQYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             GGGGGGHHHHHHCC-CCCHHHHHHHHH----HGGGHHHHTTC---TTTHHHHTSHHHHHHHHHTTCCCC
T ss_pred             hhccccHHHHhcCC-CCcHHHHHHHHh----cCCccceecCC---ccHHHHcCCHHHHHHHHhcCCCCC
Confidence            57999999999744 799999999999    78999999998   577778999999999999999987

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=98.98  E-value=1.4e-11  Score=85.71  Aligned_cols=61  Identities=28%  Similarity=0.660  Sum_probs=54.9

Q ss_pred             ccccCCHHHhcCCCCCCCHhHHHHHHHhhcCCCcccccccccCCCCCCCCCCCHHHHhhccccCCCCCC
Q 041699           37 TNLASCIPFVSGTAKKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLPINTTLALQMPAACNIDAS  105 (203)
Q Consensus        37 ~~L~pCl~yv~g~~~~PS~~CC~alk~v~~~~~~CLC~~lk~~~~~~lg~~in~trA~~LP~~Cgv~~p  105 (203)
                      .+|.+|++.++++. .|+.+||+.+|+    |..|||+|++|   +.+...||..+|.++...||+++|
T Consensus         6 ~~L~~C~~ai~~g~-~PS~~CC~kLke----Q~~ClC~Y~k~---P~~~~yv~spnarkv~~aCgvp~P   66 (69)
T d1l6ha_           6 GQLTVCTGAIAGGA-RPTAACCSSLRA----QQGCFCQFAKD---PRYGRYVNSPNARKAVSSCGIALP   66 (69)
T ss_dssp             TTHHHHHHHHTTCC-STTHHHHHHHHH----HHHHHHHHTTC---SSHHHHTTTTTGGGCCCCCSSCSC
T ss_pred             hhccccHHHHhCCC-CCcHHHHHHHHh----cCCccceeccC---ccHHHHcCCHHHHHHHHhcCCCCC
Confidence            57999999999854 699999999999    77999999998   567768999999999999999987

>d1s6da_ a.52.1.3 (A:) Methionine-rich 2S protein (albumin 8) {Common sunflower (Helianthus annuus) [TaxId: 4232]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: Methionine-rich 2S protein (albumin 8)
species: Common sunflower (Helianthus annuus) [TaxId: 4232]

Probab=94.96  E-value=0.0073  Score=43.76  Aligned_cols=74  Identities=23%  Similarity=0.500  Sum_probs=52.2

Q ss_pred             cccchHhhh---ccccCCHHHhcCC-----C-------CCCCHhHHHHHHHhhcCCCcccccccccCCCCCCCCC---CC
Q 041699           28 DEQECAEQL---TNLASCIPFVSGT-----A-------KKPTSECCQDTQKLKASKPKCLCVLIKESTDPSMGLP---IN   89 (203)
Q Consensus        28 ~~~~C~~~l---~~L~pCl~yv~g~-----~-------~~PS~~CC~alk~v~~~~~~CLC~~lk~~~~~~lg~~---in   89 (203)
                      ....|...+   ..|..|..||...     .       ..--..||+.|+++   ++.|.|..|+..+.......   -=
T Consensus         7 ~~q~C~~q~q~qq~L~~Cq~Yl~q~~~~~~~~~~~~~~e~~~~~CC~qL~q~---~~~CrC~~L~~avq~q~~q~~~~~~   83 (103)
T d1s6da_           7 TESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQV   83 (103)
T ss_dssp             CSSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHH
T ss_pred             ccccCHHHHHHhHhHHHHHHHHHHHHhccCCCCCccCchHHHHHHHHHHHcC---CCCCcCHHHHHHHHHHHhHHHHHHH
Confidence            345688554   4689999999532     1       12336899999999   99999988887654444321   12


Q ss_pred             HHHHhhccccCCCCC
Q 041699           90 TTLALQMPAACNIDA  104 (203)
Q Consensus        90 ~trA~~LP~~Cgv~~  104 (203)
                      ...|..||..||+..
T Consensus        84 ~q~Ak~LPs~C~i~P   98 (103)
T d1s6da_          84 MSMAHNLPIECNLMS   98 (103)
T ss_dssp             HHHHHHHHHHTTSSS
T ss_pred             HHHHHhChHhcCCCC
Confidence            356889999999974

>d1psya_ a.52.1.3 (A:) 2S albumin RicC3 {Castor bean (Ricinus communis) [TaxId: 3988]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: 2S albumin RicC3
species: Castor bean (Ricinus communis) [TaxId: 3988]

Probab=92.55  E-value=0.01  Score=44.25  Aligned_cols=74  Identities=19%  Similarity=0.527  Sum_probs=49.7

Q ss_pred             cccchHhhh--ccccCCHHHhcCCCC-----CC-----C-----------HhHHHHHHHhhcCCCcccccccccCCCC--
Q 041699           28 DEQECAEQL--TNLASCIPFVSGTAK-----KP-----T-----------SECCQDTQKLKASKPKCLCVLIKESTDP--   82 (203)
Q Consensus        28 ~~~~C~~~l--~~L~pCl~yv~g~~~-----~P-----S-----------~~CC~alk~v~~~~~~CLC~~lk~~~~~--   82 (203)
                      ....|...+  ..|..|..||.....     .+     .           ..||+.|+.+   ++.|.|..|+..+..  
T Consensus        14 ~~q~Crqe~q~q~L~sCq~Yl~qq~~~~~~~~~~~~~~~~~~~~~e~~~l~qCC~qL~q~---~~~CrC~~l~~~v~~~~   90 (125)
T d1psya_          14 SSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQI   90 (125)
T ss_dssp             SSSSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHH
T ss_pred             ccccCHHHHHhhhHHHHHHHHHHHHhccCCCCcccccccccccccccHHHHHHHHHHHhC---CcCCcCHHHHHHHHHHH
Confidence            445688763  469999999973210     01     0           3699999999   999999888654311  


Q ss_pred             ----CCCCCC--CHHHHhhccccCCCCC
Q 041699           83 ----SMGLPI--NTTLALQMPAACNIDA  104 (203)
Q Consensus        83 ----~lg~~i--n~trA~~LP~~Cgv~~  104 (203)
                          ..+..+  =..+|..||..||+..
T Consensus        91 qq~~~~~~~~~~~~q~Ak~LPs~C~i~~  118 (125)
T d1psya_          91 QQGQLHGEESERVAQRAGEIVSSCGVRC  118 (125)
T ss_dssp             HHTTCCTTCSHHHHHHHHHHHHHHTCST
T ss_pred             HHHHHHHHHHHHHHHHHHhChhhcCCcc
Confidence                111111  1467889999999975

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

Probab=87.56  E-value=0.045  Score=37.32  Aligned_cols=67  Identities=24%  Similarity=0.628  Sum_probs=46.7

Q ss_pred             cccCCHHHhcCCCCCCCHhHHHHHHHhhcC-CCcccccccccCCCCCCCCCCCHHHHhh-ccccCCCCCC-CCCCCC
Q 041699           38 NLASCIPFVSGTAKKPTSECCQDTQKLKAS-KPKCLCVLIKESTDPSMGLPINTTLALQ-MPAACNIDAS-VSSCPK  111 (203)
Q Consensus        38 ~L~pCl~yv~g~~~~PS~~CC~alk~v~~~-~~~CLC~~lk~~~~~~lg~~in~trA~~-LP~~Cgv~~p-~s~C~~  111 (203)
                      ++..|.+-+.+.. .+..+||.-++.+.+- -..|+|..||..     ++ +|...++. |-..||-..| .++|++
T Consensus         5 Klg~C~nvLg~~~-~~~~~CC~Ll~GL~dleAAvCLCtaika~-----~l-lnvpv~l~llln~Cgk~~P~gF~CP~   74 (75)
T d1hypa_           5 DLSICLNILGGSL-GTVDDCCALIGGLGDIEAIVCLCIQLRAL-----GI-LNLNRNLQLILNSCGRSYPSNATCPR   74 (75)
T ss_dssp             CCGGGGGGGGTCC-TTHHHHHHHHHTSCHHHHHHHHHHHHHHH-----TC-SCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred             chhhHHHHhcCcc-CCCCCcchHHhhHHHHHHHHHHHHHHHHh-----hh-ccccchHHHHHHHcCCcCcCCCcCCC
Confidence            4556777666543 3567899999988664 478999999852     22 56665554 4578999885 788875