Citrus Sinensis ID: 041705

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------
MALFYALLFALVFLIRYSAGQLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRLHFHDCFVEGCDGSILIENGPNAEKHAFGHQGVGGFEVIEKAKARSEDACPGVVSCADIVALAARDAIALSNGPSYQVPTGRRDGEVSNVTLADDMPDVSDSIQQLKTKFLHNGLSEKDLVLLSGMLSLSLSLFLMHLL
cHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccHHHcccccccccccccccc
cHHHHHHHHHHHHHHHHHccccEccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccEcccHHHccccccHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccEcccEcccccHHHHcccccccccHHHHHHHHHcccccHHHHHHHHHccEcccEEcccccc
MALFYALLFALVFLIRYSAgqlkigfysetcpeaESIVSSVVQDAVVSDPNLAAVLLRLHFHdcfvegcdgsiliengpnaekhafghqgvgGFEVIEKAKarsedacpgvvsCADIVALAARDAIalsngpsyqvptgrrdgevsnvtladdmpdvsDSIQQLKTKFlhnglsekDLVLLSGMLSLSLSLFLMHLL
MALFYALLFALVFLIRYSAGQLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRLHFHDCFVEGCDGSILIENGPNAEKHAFGHQGVGGFEVIEKAKARSEDACPGVVSCADIVALAARDAIALsngpsyqvptgrrDGEVSNVTLADDMPDVSDSIQQLKTKFLHNGLSEKDLVLLSGMLSLSLSLFLMHLL
MalfyallfalvflIRYSAGQLKIGFYSETCPEAEsivssvvqdavvsDPNLAAVLLRLHFHDCFVEGCDGSILIENGPNAEKHAFGHQGVGGFEVIEKAKARSEDACPGVVSCADIVALAARDAIALSNGPSYQVPTGRRDGEVSNVTLADDMPDVSDSIQQLKTKFLHNGLSEKDlvllsgmlslslslflmhll
**LFYALLFALVFLIRYSAGQLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRLHFHDCFVEGCDGSILIENGPNAEKHAFGHQGVGGFEVIEKAKARSEDACPGVVSCADIVALAARDAIALSN*********************************LKTKFLHNGLSEKDLVLLSGMLSLSLSLFLMH**
*ALFYALLFALVFLIRYSAGQLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRLHFHDCFVEGCDGSILIENGPNAEKHAFGHQGVGGFEVIEKAKARSEDACPGVVSCADIVALAARDAIALSNGPSYQVPTGRRDGEVSNVTLADDMPDVSDSIQQLKTKFLHNGLSEKDLVLLSGMLSLSLSLFLMHLL
MALFYALLFALVFLIRYSAGQLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRLHFHDCFVEGCDGSILIENGPNAEKHAFGHQGVGGFEVIEKAK********GVVSCADIVALAARDAIALSNGPSYQVPTGRRDGEVSNVTLADDMPDVSDSIQQLKTKFLHNGLSEKDLVLLSGMLSLSLSLFLMHLL
MALFYALLFALVFLIRYSAGQLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRLHFHDCFVEGCDGSILIENGPNAEKH*FGHQGVGGFEVIEKAKARSEDACPGVVSCADIVALAARDAIALSNGPSYQVPTGRRDGEVSNVTLADDMPDVSDSIQQLKTKFLHNGLSEKDLVLLSGMLSLSLSLFLMH**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiii
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHi
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALFYALLFALVFLIRYSAGQLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRLHFHDCFVEGCDGSILIENGPNAEKHAFGHQGVGGFEVIEKAKARSEDACPGVVSCADIVALAARDAIALSNGPSYQVPTGRRDGEVSNVTLADDMPDVSDSIQQLKTKFLHNGLSEKDLVLLSGMLSLSLSLFLMHLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query197 2.2.26 [Sep-21-2011]
Q9SZH2 326 Peroxidase 43 OS=Arabidop no no 0.898 0.542 0.668 3e-66
O49293 319 Peroxidase 13 OS=Arabidop no no 0.918 0.567 0.650 8e-60
P22196 330 Cationic peroxidase 2 OS= N/A no 0.949 0.566 0.544 2e-51
Q9XIV8 330 Peroxidase N1 OS=Nicotian N/A no 0.923 0.551 0.519 2e-47
O80822 328 Peroxidase 25 OS=Arabidop no no 0.974 0.585 0.502 9e-47
Q9FKA4 319 Peroxidase 62 OS=Arabidop no no 0.923 0.570 0.510 6e-46
Q43387 328 Peroxidase 71 OS=Arabidop no no 0.812 0.487 0.546 1e-44
Q9LSY7 329 Peroxidase 30 OS=Arabidop no no 0.913 0.547 0.478 1e-44
O23044 326 Peroxidase 3 OS=Arabidops no no 0.964 0.582 0.468 7e-44
Q9SUT2 326 Peroxidase 39 OS=Arabidop no no 0.939 0.567 0.497 1e-43
>sp|Q9SZH2|PER43_ARATH Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2 Back     alignment and function desciption
 Score =  250 bits (639), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 119/178 (66%), Positives = 145/178 (81%), Gaps = 1/178 (0%)

Query: 18  SAGQLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRLHFHDCFVEGCDGSILIEN 77
           S   L++GFYS TCP+AESIV  VV  A +SDPNL A+LLRLHFHDCFVEGCDGSIL+ N
Sbjct: 22  SLANLEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNN 81

Query: 78  GPNAEKHAFGHQGVGGFEVIEKAKARSEDACPGVVSCADIVALAARDAIALSNGPSYQVP 137
           G  +EK+AFGH+GV GFE++E  KA  E ACPGVVSC+DIVALAARDAI+L+NGP+Y+VP
Sbjct: 82  GAISEKNAFGHEGVRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVP 141

Query: 138 TGRRDGEVSNVTLADDMPDVSDSIQQLKTKFLHNGLSEKDLVLLSGMLSL-SLSLFLM 194
           TGRRDG VSN++LA DMP+VSDSI+ LK KF+  GL+ KDLVLLS   ++ + + F M
Sbjct: 142 TGRRDGRVSNMSLAKDMPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFM 199
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|O49293|PER13_ARATH Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2 Back     alignment and function description
>sp|P22196|PER2_ARAHY Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1 Back     alignment and function description
>sp|Q9XIV8|PERN1_TOBAC Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1 Back     alignment and function description
>sp|O80822|PER25_ARATH Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2 Back     alignment and function description
>sp|Q9FKA4|PER62_ARATH Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1 Back     alignment and function description
>sp|Q43387|PER71_ARATH Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1 Back     alignment and function description
>sp|Q9LSY7|PER30_ARATH Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1 Back     alignment and function description
>sp|O23044|PER3_ARATH Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=2 SV=1 Back     alignment and function description
>sp|Q9SUT2|PER39_ARATH Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query197
356528767 558 PREDICTED: peroxidase 43-like [Glycine m 0.928 0.327 0.739 2e-74
356557535 831 PREDICTED: uncharacterized protein LOC54 0.984 0.233 0.692 2e-74
5002236 341 peroxidase, partial [Glycine max] 0.928 0.536 0.726 3e-74
225447842 328 PREDICTED: peroxidase 43-like [Vitis vin 0.974 0.585 0.702 7e-74
296081516 323 unnamed protein product [Vitis vinifera] 0.974 0.594 0.702 8e-74
255635215 323 unknown [Glycine max] 0.984 0.600 0.682 3e-73
19698450 323 class III peroxidase [Gossypium hirsutum 0.964 0.588 0.722 3e-73
15236089 371 peroxidase 43 [Arabidopsis thaliana] gi| 0.842 0.447 0.704 8e-65
26397928 326 RecName: Full=Peroxidase 43; Short=Atper 0.898 0.542 0.668 2e-64
357445713 323 Peroxidase [Medicago truncatula] gi|3554 0.903 0.551 0.681 4e-63
>gi|356528767|ref|XP_003532969.1| PREDICTED: peroxidase 43-like [Glycine max] Back     alignment and taxonomy information
 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 136/184 (73%), Positives = 161/184 (87%), Gaps = 1/184 (0%)

Query: 1   MALFYALLFALVFLIRYSA-GQLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRL 59
           MALF   L    FL+  S+ GQL++GFYS TCP+ +SIV +VV+DAV+SDPN+AAVLLRL
Sbjct: 235 MALFVLSLLFFSFLMGMSSEGQLEVGFYSNTCPQVDSIVGAVVRDAVLSDPNMAAVLLRL 294

Query: 60  HFHDCFVEGCDGSILIENGPNAEKHAFGHQGVGGFEVIEKAKARSEDACPGVVSCADIVA 119
           HFHDCFV+GCDGSILIENGP +E+HAFGHQGV GFEVIE+AK + E +CPG+VSCADIVA
Sbjct: 295 HFHDCFVQGCDGSILIENGPQSERHAFGHQGVRGFEVIERAKTKLEGSCPGLVSCADIVA 354

Query: 120 LAARDAIALSNGPSYQVPTGRRDGEVSNVTLADDMPDVSDSIQQLKTKFLHNGLSEKDLV 179
           LAARDA+ ++NGP+YQVPTGRRDG VSN++LADDMPDVSDSI+ LKTKFL+ GLS KDLV
Sbjct: 355 LAARDAVVMANGPAYQVPTGRRDGLVSNLSLADDMPDVSDSIELLKTKFLNKGLSVKDLV 414

Query: 180 LLSG 183
           LLSG
Sbjct: 415 LLSG 418

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356557535|ref|XP_003547071.1| PREDICTED: uncharacterized protein LOC547549 [Glycine max] Back     alignment and taxonomy information
>gi|5002236|gb|AAD37375.1|AF145349_1 peroxidase, partial [Glycine max] Back     alignment and taxonomy information
>gi|225447842|ref|XP_002270950.1| PREDICTED: peroxidase 43-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296081516|emb|CBI20039.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255635215|gb|ACU17962.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|19698450|gb|AAL93153.1|AF485267_1 class III peroxidase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|15236089|ref|NP_194328.1| peroxidase 43 [Arabidopsis thaliana] gi|7433052|pir||T04253 peroxidase homolog F20B18.90 - Arabidopsis thaliana gi|4538927|emb|CAB39663.1| putative peroxidase [Arabidopsis thaliana] gi|7269449|emb|CAB79453.1| putative peroxidase [Arabidopsis thaliana] gi|332659739|gb|AEE85139.1| peroxidase 43 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|26397928|sp|Q9SZH2.2|PER43_ARATH RecName: Full=Peroxidase 43; Short=Atperox P43; Flags: Precursor Back     alignment and taxonomy information
>gi|357445713|ref|XP_003593134.1| Peroxidase [Medicago truncatula] gi|355482182|gb|AES63385.1| Peroxidase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query197
TAIR|locus:2164865 319 AT5G39580 [Arabidopsis thalian 0.807 0.498 0.515 7.8e-39
TAIR|locus:2164366 328 AT5G64120 [Arabidopsis thalian 0.781 0.469 0.516 1.5e-37
TAIR|locus:2207210 326 RCI3 "RARE COLD INDUCIBLE GENE 0.796 0.481 0.471 6.5e-35
TAIR|locus:2102087 321 AT3G01190 [Arabidopsis thalian 0.786 0.482 0.477 1.1e-34
TAIR|locus:2093099 329 AT3G21770 [Arabidopsis thalian 0.827 0.495 0.460 1.1e-34
TAIR|locus:2175951 313 AT5G17820 [Arabidopsis thalian 0.786 0.495 0.471 1.1e-34
TAIR|locus:2128308 326 AT4G11290 [Arabidopsis thalian 0.827 0.5 0.467 2.8e-34
TAIR|locus:2150946 329 AT5G15180 [Arabidopsis thalian 0.791 0.474 0.462 3.6e-34
TAIR|locus:2138278 346 AT4G08780 [Arabidopsis thalian 0.807 0.459 0.460 1.5e-33
TAIR|locus:2138273 346 Prx37 "peroxidase 37" [Arabido 0.807 0.459 0.447 1.4e-32
TAIR|locus:2164865 AT5G39580 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 83/161 (51%), Positives = 110/161 (68%)

Query:    17 YSAGQLKIGFYSETCPEAEXXXXXXXXXXXXXDPNLAAVLLRLHFHDCFVEGCDGSILIE 76
             Y  G  +IGFYS TCP AE             DP +A  LLR+H HDCFV+GCDGS+L+ 
Sbjct:    21 YGQGT-RIGFYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLL- 78

Query:    77 NGPNAEKHAFGHQGVGGFEVIEKAKARSEDACPGVVSCADIVALAARDAIALSNGPSYQV 136
             +GPN+E+ A  +  + GFEVI+ AK + E ACPGVVSCADI+ALAARD+++L+NG S+QV
Sbjct:    79 SGPNSERTAGANVNLHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQV 138

Query:   137 PTGRRDGEVSNVTLADDMPDVSDSIQQLKTKFLHNGLSEKD 177
             PTGRRDG VS  +  +++P  SDS+   + KF    L+ +D
Sbjct:   139 PTGRRDGRVSLASNVNNLPSPSDSLAIQQRKFSAFRLNTRD 179
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0050832 "defense response to fungus" evidence=IMP
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006865 "amino acid transport" evidence=RCA
TAIR|locus:2164366 AT5G64120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207210 RCI3 "RARE COLD INDUCIBLE GENE 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102087 AT3G01190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093099 AT3G21770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175951 AT5G17820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128308 AT4G11290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150946 AT5G15180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138278 AT4G08780 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138273 Prx37 "peroxidase 37" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.824
3rd Layer1.11.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query197
cd00693 298 cd00693, secretory_peroxidase, Horseradish peroxid 5e-91
PLN03030 324 PLN03030, PLN03030, cationic peroxidase; Provision 4e-65
pfam00141180 pfam00141, peroxidase, Peroxidase 4e-60
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 6e-15
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 2e-08
PLN02608 289 PLN02608, PLN02608, L-ascorbate peroxidase 4e-07
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 0.004
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  267 bits (686), Expect = 5e-91
 Identities = 94/165 (56%), Positives = 118/165 (71%), Gaps = 2/165 (1%)

Query: 21  QLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRLHFHDCFVEGCDGSILIEN--G 78
           QL +GFYS++CP AESIV SVV+ AV +DP LAA LLRLHFHDCFV GCD S+L+++   
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 79  PNAEKHAFGHQGVGGFEVIEKAKARSEDACPGVVSCADIVALAARDAIALSNGPSYQVPT 138
             +EK A  +  + GF+VI+  KA  E ACPGVVSCADI+ALAARDA+ L+ GPSY+VP 
Sbjct: 61  NTSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPL 120

Query: 139 GRRDGEVSNVTLADDMPDVSDSIQQLKTKFLHNGLSEKDLVLLSG 183
           GRRDG VS+     ++P    S+ QL + F   GL+  DLV LSG
Sbjct: 121 GRRDGRVSSANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSG 165

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 197
PLN03030 324 cationic peroxidase; Provisional 100.0
cd00693 298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608 289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692 328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd00649 409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.97
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 99.96
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 99.94
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.89
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 99.88
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.82
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 98.04
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.6e-67  Score=462.92  Aligned_cols=178  Identities=49%  Similarity=0.823  Sum_probs=169.9

Q ss_pred             hccCCCCcCcccCCChhHHHHHHHHHHHHHHcCCchhhhhhhhhcccccccCCCcceeecCCCCcccccCCCCCCchhHH
Q 041705           17 YSAGQLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRLHFHDCFVEGCDGSILIENGPNAEKHAFGHQGVGGFEV   96 (197)
Q Consensus        17 ~~~~~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRL~FHDc~v~GcDgSill~~~~~~E~~~~~N~gL~~~~~   96 (197)
                      +.+++|+++||++|||++|+||++.|++.+.+|++++|++|||+||||||+||||||||+++. .|+++++|.+|+||++
T Consensus        20 ~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~-~Ek~a~~N~~l~Gf~~   98 (324)
T PLN03030         20 VQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSN-TEKTALPNLLLRGYDV   98 (324)
T ss_pred             chhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCc-ccccCCCCcCcchHHH
Confidence            445779999999999999999999999999999999999999999999999999999999654 7999999999999999


Q ss_pred             HHHHHHHhhhhCCCCCCHHHHHHHhhhhhhhhcCCCcccccCCCccCCCCccccCCCCCCCCCcHHHHHHHHHHCCCCcc
Q 041705           97 IEKAKARSEDACPGVVSCADIVALAARDAIALSNGPSYQVPTGRRDGEVSNVTLADDMPDVSDSIQQLKTKFLHNGLSEK  176 (197)
Q Consensus        97 i~~iK~~le~~cp~~VScADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  176 (197)
                      |+.||+.+|++||++|||||||++|+|+||+++|||.|+|++||||+.+|..+++.+||.|+.+++++++.|+++||+.+
T Consensus        99 i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~  178 (324)
T PLN03030         99 IDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKFAAKGLNTQ  178 (324)
T ss_pred             HHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHHHHcCCCHH
Confidence            99999999999999999999999999999999999999999999999998766557899999999999999999999999


Q ss_pred             chhhhhccchhhhhhhhhh
Q 041705          177 DLVLLSGMLSLSLSLFLMH  195 (197)
Q Consensus       177 dlVaL~GaHTiG~~~~~~~  195 (197)
                      |||+||||||||++||..+
T Consensus       179 DlVaLsGAHTiG~ahC~~f  197 (324)
T PLN03030        179 DLVTLVGGHTIGTTACQFF  197 (324)
T ss_pred             Hheeeeeccccceeeeecc
Confidence            9999999999999999765

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query197
1gwo_A 309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 2e-31
1gwu_A 309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 4e-31
1w4w_A 323 Ferric Horseradish Peroxidase C1a In Complex With F 4e-31
3atj_A 309 Heme Ligand Mutant Of Recombinant Horseradish Perox 4e-31
1gx2_A 309 Recombinant Horseradish Peroxidase Phe209ser Comple 4e-31
2atj_A 308 Recombinant Horseradish Peroxidase Complex With Ben 4e-31
1gw2_A 308 Recombinant Horseradish Peroxidase C1a Thr171ser In 4e-31
6atj_A 308 Recombinant Horseradish Peroxidase C Complex With F 4e-31
2ylj_A 306 Horse Radish Peroxidase, Mutant S167y Length = 306 4e-31
1atj_A 306 Recombinant Horseradish Peroxidase C1a Length = 306 5e-31
1qgj_A 300 Arabidopsis Thaliana Peroxidase N Length = 300 8e-31
4atj_A 309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 4e-30
3hdl_A 304 Crystal Structure Of Highly Glycosylated Peroxidase 2e-29
1kzm_A 308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 2e-29
1fhf_A 304 The Structure Of Soybean Peroxidase Length = 304 8e-29
4a5g_A 308 Raphanus Sativus Anionic Peroxidase. Length = 308 9e-29
1pa2_A 306 Arabidopsis Thaliana Peroxidase A2 Length = 306 2e-28
1sch_A 294 Peanut Peroxidase Length = 294 2e-27
1bgp_A 309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 6e-25
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure 
Iteration: 1

 Score =  131 bits (329), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 95/159 (59%), Gaps = 4/159 (2%)
Query: 21  QLKIGFYSETCPEAEXXXXXXXXXXXXXDPNLAAVLLRLHFHDCFVEGCDGSILIENGPN 80
           QL   FY  +CP                DP +AA +LRLHFHDCFV GCD SIL++N  +
Sbjct: 2   QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 81  --AEKHAFGH-QGVGGFEVIEKAKARSEDACPGVVSCADIVALAARDAIALSNGPSYQVP 137
              EK AFG+     GF VI++ KA  E ACP  VSCAD++ +AA+ ++ L+ GPS++VP
Sbjct: 62  FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 138 TGRRDGEVSNVTLAD-DMPDVSDSIQQLKTKFLHNGLSE 175
            GRRD   + + LA+ ++P    ++ QLK  F + GL+ 
Sbjct: 122 LGRRDSLQAFLDLANANLPQPFFTLPQLKDSFRNVGLNR 160
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query197
1qgj_A 300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 2e-90
1pa2_A 306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 3e-88
1fhf_A 304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 6e-87
1gwu_A 309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 5e-86
1sch_A 294 PNP, peanut peroxidase, major cationic isozyme; ca 9e-86
3hdl_A 304 Royal PALM TREE peroxidase; glycosylated, oxidored 7e-85
1bgp_A 309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-81
1iyn_A 295 Chloroplastic ascorbate peroxidase; hydrogen perox 4e-39
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 4e-38
3fmu_A 331 VersatIle peroxidase VPL2; class II (fungal) perox 7e-35
2e39_A 344 Peroxidase; heme protein, coordination geometry of 3e-31
3m5q_A 357 Manganese peroxidase 1; heme, Mn(II)-binding site, 3e-31
3q3u_A 338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 2e-29
1llp_A 343 LIP4.15, lignin peroxidase; heme protein, glyco pr 1e-27
3e2o_A 294 CCP, cytochrome C peroxidase; cytochrome C peroxid 5e-06
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 3e-05
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 5e-05
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
 Score =  266 bits (682), Expect = 2e-90
 Identities = 75/164 (45%), Positives = 107/164 (65%), Gaps = 2/164 (1%)

Query: 21  QLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRLHFHDCFVEGCDGSILIENGPN 80
           QL    Y+++CP    IV   V  A+ ++  +AA L+RLHFHDCFV GCD S+L+ +G +
Sbjct: 1   QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLL-DGAD 59

Query: 81  AEKHAFGHQG-VGGFEVIEKAKARSEDACPGVVSCADIVALAARDAIALSNGPSYQVPTG 139
           +EK A  +     GFEVI+  KA  E+ACPGVVSCADI+ LAARD++ LS GP ++V  G
Sbjct: 60  SEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALG 119

Query: 140 RRDGEVSNVTLADDMPDVSDSIQQLKTKFLHNGLSEKDLVLLSG 183
           R+DG V+N   A+++P   + +  +  KF+   L+  D+V LSG
Sbjct: 120 RKDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSG 163
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query197
3hdl_A 304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1sch_A 294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1pa2_A 306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A 309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1fhf_A 304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1qgj_A 300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1bgp_A 309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A 295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
2e39_A 344 Peroxidase; heme protein, coordination geometry of 100.0
1llp_A 343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3m5q_A 357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3fmu_A 331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3e2o_A 294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3q3u_A 338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=8.4e-68  Score=461.72  Aligned_cols=175  Identities=45%  Similarity=0.757  Sum_probs=168.6

Q ss_pred             CCCcCcccCCChhHHHHHHHHHHHHHHcCCchhhhhhhhhcccccccCCCcceeecCCCC--cccccCCCC-CCchhHHH
Q 041705           21 QLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRLHFHDCFVEGCDGSILIENGPN--AEKHAFGHQ-GVGGFEVI   97 (197)
Q Consensus        21 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRL~FHDc~v~GcDgSill~~~~~--~E~~~~~N~-gL~~~~~i   97 (197)
                      .|+++||++|||++|+|||+.|++.+.+|++++|++|||+||||||+||||||||+++++  .|+++++|. +|+||++|
T Consensus         1 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vi   80 (304)
T 3hdl_A            1 DLQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVI   80 (304)
T ss_dssp             CCEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHH
T ss_pred             CCccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHH
Confidence            388999999999999999999999999999999999999999999999999999998765  799999998 89999999


Q ss_pred             HHHHHHhhhhCCCCCCHHHHHHHhhhhhhhhcCCCcccccCCCccCCCCccccC-CCCCCCCCcHHHHHHHHHHCCCCcc
Q 041705           98 EKAKARSEDACPGVVSCADIVALAARDAIALSNGPSYQVPTGRRDGEVSNVTLA-DDMPDVSDSIQQLKTKFLHNGLSEK  176 (197)
Q Consensus        98 ~~iK~~le~~cp~~VScADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gl~~~  176 (197)
                      ++||+++|++||++|||||||+||+|+||+.+|||.|+|++||+|+.+++...+ ++||.|+.++++|++.|++|||+.+
T Consensus        81 d~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T 3hdl_A           81 TAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTAD  160 (304)
T ss_dssp             HHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHH
T ss_pred             HHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHH
Confidence            999999999999999999999999999999999999999999999999988777 7899999999999999999999999


Q ss_pred             chhhhhccchhhhhhhhhh
Q 041705          177 DLVLLSGMLSLSLSLFLMH  195 (197)
Q Consensus       177 dlVaL~GaHTiG~~~~~~~  195 (197)
                      ||||||||||||++||..+
T Consensus       161 d~VaLsGaHTiG~ahC~~f  179 (304)
T 3hdl_A          161 EMVTLSGAHSIGVAHCSSF  179 (304)
T ss_dssp             HHHHHGGGGGSSEEEGGGT
T ss_pred             Hhhhhhccccccccccchh
Confidence            9999999999999998754
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 197
d1qgja_ 300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 8e-69
d1pa2a_ 306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 6e-64
d1fhfa_ 304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 8e-64
d1gwua_ 307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 3e-62
d1scha_ 294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 5e-62
d1bgpa_ 309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 3e-60
d1yyda1 357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 4e-32
d1llpa_ 343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 5e-30
d2e39a1 336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 3e-29
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 3e-24
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 4e-22
d2euta1 291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 2e-18
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]

 Score =  209 bits (534), Expect = 8e-69
 Identities = 75/171 (43%), Positives = 109/171 (63%), Gaps = 2/171 (1%)

Query: 21  QLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRLHFHDCFVEGCDGSILIENGPN 80
           QL    Y+++CP    IV   V  A+ ++  +AA L+RLHFHDCFV GCD S+L+ +G +
Sbjct: 1   QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLL-DGAD 59

Query: 81  AEKHAFGHQG-VGGFEVIEKAKARSEDACPGVVSCADIVALAARDAIALSNGPSYQVPTG 139
           +EK A  +     GFEVI+  KA  E+ACPGVVSCADI+ LAARD++ LS GP ++V  G
Sbjct: 60  SEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALG 119

Query: 140 RRDGEVSNVTLADDMPDVSDSIQQLKTKFLHNGLSEKDLVLLSGMLSLSLS 190
           R+DG V+N   A+++P   + +  +  KF+   L+  D+V LSG  +   +
Sbjct: 120 RKDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQA 170
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query197
d1fhfa_ 304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_ 306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_ 300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_ 307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_ 309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_ 294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2e39a1 336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1yyda1 357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1llpa_ 343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1 291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.95
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.94
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.94
d1itka1 406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.93
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.93
d1mwva1 406 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.93
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.93
d1ub2a1 406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.91
d2ccaa1 410 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.9
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=4.9e-66  Score=449.14  Aligned_cols=175  Identities=44%  Similarity=0.736  Sum_probs=168.3

Q ss_pred             CCCcCcccCCChhHHHHHHHHHHHHHHcCCchhhhhhhhhcccccccCCCcceeecCCCC--cccccCCCCC-CchhHHH
Q 041705           21 QLKIGFYSETCPEAESIVSSVVQDAVVSDPNLAAVLLRLHFHDCFVEGCDGSILIENGPN--AEKHAFGHQG-VGGFEVI   97 (197)
Q Consensus        21 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRL~FHDc~v~GcDgSill~~~~~--~E~~~~~N~g-L~~~~~i   97 (197)
                      ||+.+||++|||++|+||+++|++.+.+|++++|++|||+||||||+||||||||+++++  .|+++++|.+ ++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            799999999999999999999999999999999999999999999999999999998765  8999999985 5899999


Q ss_pred             HHHHHHhhhhCCCCCCHHHHHHHhhhhhhhhcCCCcccccCCCccCCCCccccC-CCCCCCCCcHHHHHHHHHHCCCCcc
Q 041705           98 EKAKARSEDACPGVVSCADIVALAARDAIALSNGPSYQVPTGRRDGEVSNVTLA-DDMPDVSDSIQQLKTKFLHNGLSEK  176 (197)
Q Consensus        98 ~~iK~~le~~cp~~VScADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gl~~~  176 (197)
                      +.||+.+|+.||++|||||||+||+|+||+.+|||.|+|++||+|+.+++...+ .+||.|+.+++++++.|++|||+.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            999999999999999999999999999999999999999999999999987766 7899999999999999999999999


Q ss_pred             chhhhhccchhhhhhhhhh
Q 041705          177 DLVLLSGMLSLSLSLFLMH  195 (197)
Q Consensus       177 dlVaL~GaHTiG~~~~~~~  195 (197)
                      |||||+||||||++||..+
T Consensus       161 d~VaLsGaHTiG~ahc~~~  179 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTF  179 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGT
T ss_pred             HHHHHhhhhhhcccccccc
Confidence            9999999999999998764
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure