Citrus Sinensis ID: 041719

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290--

MAFLRYLQSIIITSVCFSVVATAKNDSLPFNKYAFLTTHNSFAISEGRHSGLFSLVITNQDDKITQQLNHGVRALMLDTYDYKNDIWLCHASKGKCEDYTSFGPAREVFKEIEAFLSANKSEIVTLFLEDYVETPKGLTKVFNETGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVFTSKKSKQESEGIAYQWNYVVENHYGDEGMHSGKCSNRAESVPLNDKTKSLVLVNHFPSIPLKLRSSRDNSKGLIDMVQTCYGAAGNRWANFVAVDFYRKGEAFQAIDKINNG

ccHHHHHHHHHHHcccccccccccccccccccEEEEcccccccccccccccccccccccccccHHHHHHccccEEEEEEEcccccEEEEcccccccccccccccHHHHHHHHHHHHccccccEEEEEEEEccccccccHHHHHHccccccccccccccccccccccHHHHHHcccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHccc

ccHHHHHHHHEcccccccccccccccccccccEEEEEEcccccccccccccccccccccccccHHHHHHcccEEEEEEEEcccccEEEEEcccccccccccccHHHHHHHHHHHHHHHccccEEEEEEEccccccccHHHHHHHccccHcccccccccccccccccHHHHHHcccEEEEEEccccccccccccccccEEEEccccccccccccccccccccccccccccEEEEEcccccccccHHcccccHHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHccc

MAFLRYLQSIIITSVCFSVVAtakndslpfnkyafltthnsfaisegrhsGLFSLVITNQDDKITQQLNHGVRALMLDTYDYKNDIWlchaskgkcedytsfgpaREVFKEIEAFLSANKSEIVTLFLEDYvetpkgltkvfnetglmkywfpvskmpqngqdwplvrDMVASNQRLVVFTSkkskqesegIAYQWNYVVEnhygdegmhsgkcsnraesvplndktkslvlvnhfpsiplklrssrdnsKGLIDMVQTCYGAAGNRWANFVAVDfyrkgeafQAIDKINNG

MAFLRYLQSIIITSVCFSVVATAKNDSLPFNKYAFLTTHNSFAISEGRHSGLFSLVITNQDDKITQQLNHGVRALMLDTYDYKNDIWLCHASKGKCEDYTSFGPAREVFKEIEAFLSANKSEIVTLFLEDYVETPKGLTKVFNETGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVftskkskqesegiAYQWNYVVENHYGDEGMHSGKCSNRAESVPLNDKTKSLVLVNHfpsiplklrssrdnsKGLIDMVQTCYGAAGNRWANFVAVDFYRKGeafqaidkinng

**FLRYLQSIIITSVCFSVVATAKNDSLPFNKYAFLTTHNSFAISEGRHSGLFSLVITNQDDKITQQLNHGVRALMLDTYDYKNDIWLCHASKGKCEDYTSFGPAREVFKEIEAFLSANKSEIVTLFLEDYVETPKGLTKVFNETGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVFT********EGIAYQWNYVVENHYGD**********************SLVLVNHFPSIPLKL*******KGLIDMVQTCYGAAGNRWANFVAVDFYRKGEAFQAI******

*AFLRYLQSIIITSVCFSVVATAKNDSLPFNKYAFLTTHNSFAISEGRHSGLFSLVITNQDDKITQQLNHGVRALMLDTYDYKNDIWLCHASKGKCEDYTSFGPAREVFKEIEAFLSANKSEIVTLFLEDYVETPKGLTKVFNETGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVFTSKKSKQESEGIAYQWNYVVENHYGDEGMHSGKCSNRAESVPLNDKTKSLVLVNHFPSIPLKLRSSRDNSKGLIDMVQTCYGAAGNRWANFVAVDFYRKGEAFQAIDKINN*

MAFLRYLQSIIITSVCFSVVATAKNDSLPFNKYAFLTTHNSFAISEGRHSGLFSLVITNQDDKITQQLNHGVRALMLDTYDYKNDIWLCHASKGKCEDYTSFGPAREVFKEIEAFLSANKSEIVTLFLEDYVETPKGLTKVFNETGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVFT*********GIAYQWNYVVENHYGDEGMHSGKCSNRAESVPLNDKTKSLVLVNHFPSIPLKLRSSRDNSKGLIDMVQTCYGAAGNRWANFVAVDFYRKGEAFQAIDKINNG

MAFLRYLQSIIITSVCFSVVATAKNDSLPFNKYAFLTTHNSFAISEGRHSGLFSLVITNQDDKITQQLNHGVRALMLDTYDYKNDIWLCHASKGKCEDYTSFGPAREVFKEIEAFLSANKSEIVTLFLEDYVETPKGLTKVFNETGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVFTSKKSKQESEGIAYQWNYVVENHYGDEGMHSGKCSNRAE******KTKSLVLVNHFPSIPLKLRSSRDNSKGLIDMVQTCYGAAGNRWANFVAVDFYRKGEAFQAIDKINNG

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		292	2.2.26 [Sep-21-2011]
Q93XX5		426	PI-PLC X domain-containin	no	no	0.907	0.622	0.513	3e-82

>sp\|Q93XX5\|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1	Back alignment and function desciption

 Score =  305 bits (780), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 138/269 (51%), Positives = 190/269 (70%), Gaps = 4/269 (1%)

Query: 26  DSLPFNKYAFLTTHNSFAISEGRH-SGLFSLVITNQDDKITQQLNHGVRALMLDTYDYKN 84
           + LPFNKY +L THN+F+ +      G+  +   NQ+D IT QL +GVR LMLD YD+ N
Sbjct: 78  NGLPFNKYTWLMTHNAFSNANAPLLPGVERITFYNQEDTITNQLQNGVRGLMLDMYDFNN 137

Query: 85  DIWLCHASKGKCEDYTSFGPAREVFKEIEAFLSANKSEIVTLFLEDYVETPKGLTKVFNE 144
           DIWLCH+ +G+C ++T+F PA  + +E+EAFLS N +EIVT+ +EDYV  PKGL+ +F  
Sbjct: 138 DIWLCHSLRGQCFNFTAFQPAINILREVEAFLSQNPTEIVTIIIEDYVHRPKGLSTLFAN 197

Query: 145 TGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVFTSKKSKQESEGIAYQWNYVVENHY 204
            GL KYWFPVSKMP+ G+DWP V DMV  N RL+VFTS  +K++ EG+AYQW Y+VEN  
Sbjct: 198 AGLDKYWFPVSKMPRKGEDWPTVTDMVQENHRLLVFTSVAAKEDEEGVAYQWRYMVENES 257

Query: 205 GDEGMHSGKCSNRAESVPLNDKTKSLVLVNHFPSIPLKLRSSRDNSKGLIDMVQTCYGAA 264
           GD G+  G C NR ES PLN K+ SL L+N+FP+ P++  + +++S  L +MV TC  + 
Sbjct: 258 GDPGVKRGSCPNRKESQPLNSKSSSLFLMNYFPTYPVEKDACKEHSAPLAEMVGTCLKSG 317

Query: 265 GNRWANFVAVDFYRK---GEAFQAIDKIN 290
           GNR  NF+AV+FY +   G  F+ +D++N
Sbjct: 318 GNRMPNFLAVNFYMRSDGGGVFEILDRMN 346

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		292
242035471		367	hypothetical protein SORBIDRAFT_01g03251	0.910	0.724	0.707	1e-113
115453527		360	Os03g0415200 [Oryza sativa Japonica Grou	0.910	0.738	0.7	1e-111
108708810		377	MAP3K-like protein kinase, putative, exp	0.910	0.705	0.7	1e-111
413955448		371	hypothetical protein ZEAMMB73_151451 [Ze	0.910	0.716	0.681	1e-110
225451800		364	PREDICTED: PI-PLC X domain-containing pr	0.910	0.730	0.688	1e-110
357157854		359	PREDICTED: PI-PLC X domain-containing pr	0.910	0.740	0.677	1e-108
255541988		365	phospholipase C, putative [Ricinus commu	0.907	0.726	0.685	1e-108
225451802		374	PREDICTED: PI-PLC X domain-containing pr	0.910	0.711	0.685	1e-107
298204462		380	unnamed protein product [Vitis vinifera]	0.910	0.7	0.685	1e-107
356567109		321	PREDICTED: PI-PLC X domain-containing pr	0.938	0.853	0.651	1e-107

>gi\|242035471\|ref\|XP_002465130.1\| hypothetical protein SORBIDRAFT_01g032510 [Sorghum bicolor] gi\|241918984\|gb\|EER92128.1\| hypothetical protein SORBIDRAFT_01g032510 [Sorghum bicolor]	Back alignment and taxonomy information

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 191/270 (70%), Positives = 227/270 (84%), Gaps = 4/270 (1%)

Query: 25  NDSLPFNKYAFLTTHNSFAI-SEGRHSGLFSLVITNQDDKITQQLNHGVRALMLDTYDYK 83
           N+SLPFNKYA+LTTHNS+AI  E  H+G+  +   NQ+D +T QLN+GVRALMLDTYD+K
Sbjct: 78  NNSLPFNKYAYLTTHNSYAIVGEPSHTGIPRVTFDNQEDTVTDQLNNGVRALMLDTYDFK 137

Query: 84  NDIWLCHASKGKCEDYTSFGPAREVFKEIEAFLSANKSEIVTLFLEDYVETPKGLTKVFN 143
           ND+WLCH+S GKC D+T+F PA + FKEIEAFLSAN SEIVT+ LEDYV  P GLT VFN
Sbjct: 138 NDVWLCHSSGGKCNDFTAFEPALDTFKEIEAFLSANPSEIVTIILEDYVHAPNGLTNVFN 197

Query: 144 ETGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVFTSKKSKQESEGIAYQWNYVVENH 203
            +GL+KYWFPVSKMPQNGQDWPLV DMVASNQRL+VFTS  SKQ +EGIAYQWN++VEN+
Sbjct: 198 ASGLLKYWFPVSKMPQNGQDWPLVSDMVASNQRLLVFTSISSKQSTEGIAYQWNFMVENN 257

Query: 204 YGDEGMHSGKCSNRAESVPLNDKTKSLVLVNHFPSIPLKLRSSRDNSKGLIDMVQTCYGA 263
           YGD+GM +GKCSNRAES PLND TKSLVL+N+FPS+P+K  +   +S+ LIDMV TCYGA
Sbjct: 258 YGDDGMDAGKCSNRAESAPLNDNTKSLVLMNYFPSVPVKFTACLQHSQNLIDMVNTCYGA 317

Query: 264 AGNRWANFVAVDFYRK---GEAFQAIDKIN 290
           AGNRWANFVAVD+Y++   G AFQA D +N
Sbjct: 318 AGNRWANFVAVDYYKRSDGGGAFQATDLLN 347

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115453527|ref|NP_001050364.1| Os03g0415200 [Oryza sativa Japonica Group] gi|41469135|gb|AAS07086.1| expressed protein [Oryza sativa Japonica Group] gi|108708809|gb|ABF96604.1| MAP3K-like protein kinase, putative, expressed [Oryza sativa Japonica Group] gi|113548835|dbj|BAF12278.1| Os03g0415200 [Oryza sativa Japonica Group] gi|215693980|dbj|BAG89177.1| unnamed protein product [Oryza sativa Japonica Group] gi|222625124|gb|EEE59256.1| hypothetical protein OsJ_11265 [Oryza sativa Japonica Group]

Back alignment and taxonomy information

>gi\|108708810\|gb\|ABF96605.1\| MAP3K-like protein kinase, putative, expressed [Oryza sativa Japonica Group]	Back alignment and taxonomy information

>gi\|413955448\|gb\|AFW88097.1\| hypothetical protein ZEAMMB73_151451 [Zea mays]	Back alignment and taxonomy information

>gi\|225451800\|ref\|XP_002277997.1\| PREDICTED: PI-PLC X domain-containing protein At5g67130 [Vitis vinifera] gi\|298204463\|emb\|CBI16943.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|357157854\|ref\|XP_003577935.1\| PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Brachypodium distachyon]	Back alignment and taxonomy information

>gi\|255541988\|ref\|XP_002512058.1\| phospholipase C, putative [Ricinus communis] gi\|223549238\|gb\|EEF50727.1\| phospholipase C, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|225451802\|ref\|XP_002278017.1\| PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|298204462\|emb\|CBI16942.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356567109\|ref\|XP_003551765.1\| PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		292
TAIR\|locus:2023898		346	AT1G13680 [Arabidopsis thalian	0.904	0.763	0.624	8.1e-92
TAIR\|locus:2012181		359	AT1G49740 [Arabidopsis thalian	0.917	0.746	0.556	1.2e-81
TAIR\|locus:4010713931		408	AT4G36945 [Arabidopsis thalian	0.917	0.656	0.551	1.4e-80
TAIR\|locus:2090709		413	AT3G19310 [Arabidopsis thalian	0.921	0.651	0.525	1.6e-77
TAIR\|locus:2155523		426	AT5G67130 [Arabidopsis thalian	0.945	0.647	0.501	2.1e-75
ASPGD\|ASPL0000051754		381	AN1855 [Emericella nidulans (t	0.763	0.585	0.286	1.7e-14
ASPGD\|ASPL0000053240		470	AN1330 [Emericella nidulans (t	0.808	0.502	0.248	2e-13
UNIPROTKB\|G4N3K9		375	MGG_04991 "Uncharacterized pro	0.688	0.536	0.229	1.1e-07

TAIR\|locus:2023898 AT1G13680 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
 Identities = 173/277 (62%), Positives = 218/277 (78%)

Query:    17 FSVVATAKNDSLPFNKYAFLTTHNSFAISEGRHSGLFSLVITNQDDKITQQLNHGVRALM 76
             FS+V    N+S+PFNKYAFLTTHNS+AI EG+     +L +  Q+D I QQLN GVRALM
Sbjct:    67 FSIV----NNSMPFNKYAFLTTHNSYAI-EGK-----ALHVATQEDTIVQQLNSGVRALM 116

Query:    77 LDTYDYKNDIWLCHASKGKCEDYTSFGPAREVFKEIEAFLSANKSEIVTLFLEDYVETPK 136
             LDTYDY+ D+W CH+   +C ++T F  A + FKEI AFL+AN SEIVTL LEDYV++  
Sbjct:   117 LDTYDYEGDVWFCHSFDEQCFEFTKFNRAIDTFKEIFAFLTANPSEIVTLILEDYVKSQN 176

Query:   137 GLTKVFNETGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVFTSKKSKQESEGIAYQW 196
             GLTKVF ++GL K+WFPV  MP  GQDWPLV+DMVA+N RL+VFTS KSKQE+EGIAYQW
Sbjct:   177 GLTKVFTDSGLKKFWFPVQNMPIGGQDWPLVKDMVANNHRLIVFTSAKSKQETEGIAYQW 236

Query:   197 NYVVENHYGDEGMHSGKCSNRAESVPLNDKTKSLVLVNHFPSIPLKLRSSRDNSKGLIDM 256
             NY+VEN YGD+G+   +CSNRA+S  L DKTK+LV VNHF ++P+K+ +  +NS+ L+DM
Sbjct:   237 NYMVENQYGDDGVKPDECSNRADSALLTDKTKALVSVNHFKTVPVKILTCEENSEQLLDM 296

Query:   257 VQTCYGAAGNRWANFVAVDFYRK---GEAFQAIDKIN 290
             ++TCY AAGNRWANFVAV+FY++   G  FQAIDK+N
Sbjct:   297 IKTCYVAAGNRWANFVAVNFYKRSNGGGTFQAIDKLN 333

GO:0004629 "phospholipase C activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0010048 "vernalization response" evidence=RCA

TAIR\|locus:2012181 AT1G49740 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:4010713931 AT4G36945 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2090709 AT3G19310 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2155523 AT5G67130 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000051754 AN1855 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000053240 AN1330 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|G4N3K9 MGG_04991 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		292
cd08588		270	cd08588, PI-PLCc_At5g67130_like, Catalytic domain	1e-109
cd08557		271	cd08557, PI-PLCc_bacteria_like, Catalytic domain o	9e-49
cd08590		267	cd08590, PI-PLCc_Rv2075c_like, Catalytic domain of	4e-16
cd08586		279	cd08586, PI-PLCc_BcPLC_like, Catalytic domain of B	2e-08
cd08587		288	cd08587, PI-PLCXDc_like, Catalytic domain of phosp	6e-07
cd08622		276	cd08622, PI-PLCXDc_CG14945_like, Catalytic domain	1e-04
cd08616		290	cd08616, PI-PLCXD1c, Catalytic domain of phosphati	0.003
smart00148		143	smart00148, PLCXc, Phospholipase C, catalytic doma	0.004

>gnl\|CDD\|176530 cd08588, PI-PLCc_At5g67130_like, Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs	Back alignment and domain information

 Score =  317 bits (815), Expect = e-109
 Identities = 107/277 (38%), Positives = 153/277 (55%), Gaps = 16/277 (5%)

Query: 21  ATAKNDSLPFNKYAFLTTHNSFAISEGRHSGLFSLVITNQDDKITQQLNHGVRALMLDTY 80
            +       +++Y FLTTHNSFA SE         +  NQ+D IT+QL+ GVR LMLD +
Sbjct: 3   GSPALCDRTYDEYTFLTTHNSFANSEDA-----FFLAPNQEDDITKQLDDGVRGLMLDIH 57

Query: 81  DYKNDIWLCHASKGKCEDYTSFGPAREVFKEIEAFLSANKSEIVTLFLEDYVET-PKGLT 139
           D    + LCH+  G        GP  +V +E+  FL AN +E+VTLFLEDYV   P   +
Sbjct: 58  DANGGLRLCHSVCGLG----DGGPLSDVLREVVDFLDANPNEVVTLFLEDYVSPGPLLRS 113

Query: 140 KVFNETGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVFTSKKSKQ-ESEGIAYQWNY 198
           K+F   GL    +    MP  G DWP + +M+ +N+RL+VFT  +    E  G+ YQ++Y
Sbjct: 114 KLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLLVFTDNEDVSTEPPGVMYQFDY 173

Query: 199 VVENHYGDEGMHSGKCSNRAESVPLNDKT---KSLVLVNHFPSIPLKLRS--SRDNSKGL 253
            VEN +   G     C+ R  S PL+      + L L+NHF  +P+ + +    +    L
Sbjct: 174 TVENPFSVGGDDDWSCTVRRGSGPLSRIAPGFRRLFLMNHFRDVPVPITAANDNNGDGLL 233

Query: 254 IDMVQTCYGAAGNRWANFVAVDFYRKGEAFQAIDKIN 290
           +  +  C  AAG R  NFVAVDFY  G+AF+A+D++N
Sbjct: 234 LRHLNNCRPAAGGRKPNFVAVDFYNIGDAFEAVDELN 270

This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Length = 270

>gnl\|CDD\|176500 cd08557, PI-PLCc_bacteria_like, Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins	Back alignment and domain information

>gnl\|CDD\|176532 cd08590, PI-PLCc_Rv2075c_like, Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins	Back alignment and domain information

>gnl\|CDD\|176528 cd08586, PI-PLCc_BcPLC_like, Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins	Back alignment and domain information

>gnl\|CDD\|176529 cd08587, PI-PLCXDc_like, Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins	Back alignment and domain information

>gnl\|CDD\|176559 cd08622, PI-PLCXDc_CG14945_like, Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing	Back alignment and domain information

>gnl\|CDD\|176555 cd08616, PI-PLCXD1c, Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1	Back alignment and domain information

>gnl\|CDD\|197543 smart00148, PLCXc, Phospholipase C, catalytic domain (part); domain X	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		292
cd08588		270	PI-PLCc_At5g67130_like Catalytic domain of Arabido	100.0
cd08622		276	PI-PLCXDc_CG14945_like Catalytic domain of Drosoph	100.0
cd08621		300	PI-PLCXDc_like_2 Catalytic domain of uncharacteriz	100.0
cd08557		271	PI-PLCc_bacteria_like Catalytic domain of bacteria	100.0
cd08616		290	PI-PLCXD1c Catalytic domain of phosphatidylinosito	100.0
cd08587		288	PI-PLCXDc_like Catalytic domain of phosphatidylino	100.0
cd08590		267	PI-PLCc_Rv2075c_like Catalytic domain of uncharact	100.0
cd08620		281	PI-PLCXDc_like_1 Catalytic domain of uncharacteriz	100.0
PTZ00268		380	glycosylphosphatidylinositol-specific phospholipas	100.0
cd08586		279	PI-PLCc_BcPLC_like Catalytic domain of Bacillus ce	100.0
KOG4306		306	consensus Glycosylphosphatidylinositol-specific ph	99.97
cd08619		285	PI-PLCXDc_plant Catalytic domain of phosphatidylin	99.97
PF00388		146	PI-PLC-X: Phosphatidylinositol-specific phospholip	99.93
smart00148		135	PLCXc Phospholipase C, catalytic domain (part); do	99.92
cd00137		274	PI-PLCc Catalytic domain of prokaryotic and eukary	99.91
cd08589		324	PI-PLCc_SaPLC1_like Catalytic domain of Streptomyc	99.91
cd08599		228	PI-PLCc_plant Catalytic domain of plant phosphatid	99.28
cd08558		226	PI-PLCc_eukaryota Catalytic domain of eukaryotic p	99.24
cd08598		231	PI-PLC1c_yeast Catalytic domain of putative yeast	99.21
cd08592		229	PI-PLCc_gamma Catalytic domain of metazoan phospho	99.12
cd08597		260	PI-PLCc_PRIP_metazoa Catalytic domain of metazoan	99.11
cd08628		254	PI-PLCc_gamma2 Catalytic domain of metazoan phosph	99.1
cd08627		229	PI-PLCc_gamma1 Catalytic domain of metazoan phosph	98.8
cd08594		227	PI-PLCc_eta Catalytic domain of metazoan phosphoin	98.77
cd08633		254	PI-PLCc_eta2 Catalytic domain of metazoan phosphoi	98.76
cd08631		258	PI-PLCc_delta4 Catalytic domain of metazoan phosph	98.76
cd08632		253	PI-PLCc_eta1 Catalytic domain of metazoan phosphoi	98.74
cd08630		258	PI-PLCc_delta3 Catalytic domain of metazoan phosph	98.72
cd08595		257	PI-PLCc_zeta Catalytic domain of metazoan phosphoi	98.71
cd08593		257	PI-PLCc_delta Catalytic domain of metazoan phospho	98.68
cd08629		258	PI-PLCc_delta1 Catalytic domain of metazoan phosph	98.66
cd08626		257	PI-PLCc_beta4 Catalytic domain of metazoan phospho	98.64
cd08591		257	PI-PLCc_beta Catalytic domain of metazoan phosphoi	98.62
cd08596		254	PI-PLCc_epsilon Catalytic domain of metazoan phosp	98.62
PLN02230		598	phosphoinositide phospholipase C 4	98.6
cd08624		261	PI-PLCc_beta2 Catalytic domain of metazoan phospho	98.6
cd08625		258	PI-PLCc_beta3 Catalytic domain of metazoan phospho	98.58
cd08623		258	PI-PLCc_beta1 Catalytic domain of metazoan phospho	98.58
PLN02223		537	phosphoinositide phospholipase C	98.57
KOG0169		746	consensus Phosphoinositide-specific phospholipase	98.56
PLN02228		567	Phosphoinositide phospholipase C	98.52
PLN02952		599	phosphoinositide phospholipase C	98.52
PLN02222		581	phosphoinositide phospholipase C 2	98.5
cd08555		179	PI-PLCc_GDPD_SF Catalytic domain of phosphoinositi	97.96
PF03490		51	Varsurf_PPLC: Variant-surface-glycoprotein phospho	96.94
KOG1264		1267	consensus Phospholipase C [Lipid transport and met	96.77
KOG1265		1189	consensus Phospholipase C [Lipid transport and met	96.08
cd08556		189	GDPD Glycerophosphodiester phosphodiesterase domai	91.57
cd08577		228	PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetic	91.51

>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs	Back alignment and domain information

Probab=100.00  E-value=7.7e-67  Score=475.71  Aligned_cols=260  Identities=41%  Similarity=0.700  Sum_probs=228.0

Q ss_pred             cCCCCCccCCceeeeccCccCCCCCCCCCCcccccccCCchhHHHHHHccCcEEEEEEEeeCCcEEEEecCCCCcccCCC
Q 041719           22 TAKNDSLPFNKYAFLTTHNSFAISEGRHSGLFSLVITNQDDKITQQLNHGVRALMLDTYDYKNDIWLCHASKGKCEDYTS  101 (292)
Q Consensus        22 ~~~~~~~pl~~l~ipGTHnS~~~~~~~~~g~~~~~~~nQ~~si~~QL~~GvR~ldlrv~~~~~~~~l~H~~~~~C~~~~~  101 (292)
                      .+...++||+++++|||||||+.+....     .++.||+.+|++||++|||+||||+|..++++++||+.   |.+.+ 
T Consensus         4 ~~~~~~~~~~~it~~gtHNS~~~~~~~~-----~~~~nQ~~si~~QL~~GiR~l~ld~~~~~~~~~lcH~~---~~~~~-   74 (270)
T cd08588           4 SPALCDRTYDEYTFLTTHNSFANSEDAF-----FLAPNQEDDITKQLDDGVRGLMLDIHDANGGLRLCHSV---CGLGD-   74 (270)
T ss_pred             CcccCCcccccceeEEeccCccccCCCc-----ccccccCCCHHHHHHhCcceEeeeEEecCCCEEEECCC---ccccC-
Confidence            3456789999999999999999873211     36899999999999999999999999999999999997   87643 


Q ss_pred             ccCHHHHHHHHHHHHhcCCCCeEEEeeccccCCcc-hhhHHHhhcCcCceeecCCCCCCCCCCCCcHHHHHhCCcEEEEE
Q 041719          102 FGPAREVFKEIEAFLSANKSEIVTLFLEDYVETPK-GLTKVFNETGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVF  180 (292)
Q Consensus       102 ~~~l~d~L~ei~~fL~~nP~EvVil~l~~~~~~~~-~~~~~~~~~~l~~~~~~p~~~~~~~~~wPTL~el~~~gkrvivf  180 (292)
                      +++++++|++|++||++||+|||||+|+++..... .+.++++..|+++++|+|+..+...++||||+|||++|||||||
T Consensus        75 ~~~~~d~L~~i~~fL~~nP~EvV~l~l~~~~~~~~~~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi~~gkRlvvf  154 (270)
T cd08588          75 GGPLSDVLREVVDFLDANPNEVVTLFLEDYVSPGPLLRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLLVF  154 (270)
T ss_pred             CccHHHHHHHHHHHHHhCCCcEEEEEEEeCCCcchHHHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHHhcCCEEEEE
Confidence            38999999999999999999999999998764333 47788888899999999987776678999999999999999999


Q ss_pred             EcCCCCc-CcCCcccccccccccCCCCCCCCcccccCCCCCCCCCCc---CCceEEeeeCCCCcccccc--cCCCchhHH
Q 041719          181 TSKKSKQ-ESEGIAYQWNYVVENHYGDEGMHSGKCSNRAESVPLNDK---TKSLVLVNHFPSIPLKLRS--SRDNSKGLI  254 (292)
Q Consensus       181 ~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~~C~~r~~~~~l~~~---~~~lfl~nhf~~~P~~~~a--~~~n~~~l~  254 (292)
                      +++++.+ ..+++.++|+|+|||||++++...++|+.||++.++.+.   .++||+||||++.|....+  +.++.++|+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~C~~~r~~~~~~~~~~~~~~l~l~Nhf~~~~~~~~~~n~~~~~~~l~  234 (270)
T cd08588         155 TDNEDVSTEPPGVMYQFDYTVENPFSVGGDDDWSCTVRRGSGPLSRIAPGFRRLFLMNHFRDVPVPITAANDNNGDGLLL  234 (270)
T ss_pred             EecCCCCCCCCeeeecceeEEEcCCCCCCCCCCCCCCCCCCCCcccccccccceeEEecCCCCccccccccccCCcHHHH
Confidence            9987653 456888999999999999998788999998887765543   3789999999999987777  567789999


Q ss_pred             HHHHHhccCCCCCcceEEEEeccCCCChHHHHHHhc
Q 041719          255 DMVQTCYGAAGNRWANFVAVDFYRKGEAFQAIDKIN  290 (292)
Q Consensus       255 ~~~~~C~~~~~~r~pNfv~vDF~~~g~~~~~v~~lN  290 (292)
                      .++++|.+++|+|+||||+||||++|+++++|+.||
T Consensus       235 ~~~~~C~~~~~~r~PNfv~VDf~~~G~~~~~~~~lN  270 (270)
T cd08588         235 RHLNNCRPAAGGRKPNFVAVDFYNIGDAFEAVDELN  270 (270)
T ss_pred             HHHHHHHHHhCCCCCCEEEEeecccCCHHHHHHHhC
Confidence            999999999967889999999999999999999998

>cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing	Back alignment and domain information

>cd08621 PI-PLCXDc_like_2 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins	Back alignment and domain information

>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins	Back alignment and domain information

>cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1	Back alignment and domain information

>cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins	Back alignment and domain information

>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins	Back alignment and domain information

>cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins	Back alignment and domain information

>PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional	Back alignment and domain information

>cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins	Back alignment and domain information

>KOG4306 consensus Glycosylphosphatidylinositol-specific phospholipase C [Signal transduction mechanisms]	Back alignment and domain information

>cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants	Back alignment and domain information

>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3	Back alignment and domain information

>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X	Back alignment and domain information

>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C	Back alignment and domain information

>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins	Back alignment and domain information

>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C	Back alignment and domain information

>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins	Back alignment and domain information

>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C	Back alignment and domain information

>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma	Back alignment and domain information

>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein	Back alignment and domain information

>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2	Back alignment and domain information

>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1	Back alignment and domain information

>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta	Back alignment and domain information

>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2	Back alignment and domain information

>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4	Back alignment and domain information

>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1	Back alignment and domain information

>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3	Back alignment and domain information

>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta	Back alignment and domain information

>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta	Back alignment and domain information

>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1	Back alignment and domain information

>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4	Back alignment and domain information

>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta	Back alignment and domain information

>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon	Back alignment and domain information

>PLN02230 phosphoinositide phospholipase C 4	Back alignment and domain information

>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2	Back alignment and domain information

>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3	Back alignment and domain information

>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1	Back alignment and domain information

>PLN02223 phosphoinositide phospholipase C	Back alignment and domain information

>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]	Back alignment and domain information

>PLN02228 Phosphoinositide phospholipase C	Back alignment and domain information

>PLN02952 phosphoinositide phospholipase C	Back alignment and domain information

>PLN02222 phosphoinositide phospholipase C 2	Back alignment and domain information

>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily	Back alignment and domain information

>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis	Back alignment and domain information

>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]	Back alignment and domain information

>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]	Back alignment and domain information

>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins	Back alignment and domain information

>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		292
2plc_A		274	PI-PLC, phosphatidylinositol-specific phospholipas	4e-29
3ea1_A		298	1-phosphatidylinositol phosphodiesterase; phosphat	8e-28
3v1h_A		306	1-phosphatidylinositol phosphodiesterase; PI-catio	1e-22
3h4x_A		339	Phosphatidylinositol-specific phospholipase C1; PI	8e-09

>2plc_A PI-PLC, phosphatidylinositol-specific phospholipase C; hydrolase, phospholipid degradation, virulence factor of human pathogen; 2.00A {Listeria monocytogenes} SCOP: c.1.18.2 PDB: 1aod_A* Length = 274	Back alignment and structure

 Score =  111 bits (278), Expect = 4e-29
 Identities = 37/265 (13%), Positives = 84/265 (31%), Gaps = 29/265 (10%)

Query: 25  NDSLPFNKYAFLTTHNSFAISEGRHSGLFSLVITNQDDKITQQLNHGVRALMLDTYDYKN 84
            D+      +   TH++ + +      L   +   Q   + QQL  G+R + +     K+
Sbjct: 11  PDTTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDI---RAKD 67

Query: 85  DIWLCHASKGKCEDYTSFGPAREVFKEIEAFLSANKSEIVTLFLEDYVETPKGLTKVFNE 144
           ++ + H   G      S      V + I  FL  N  E + + L+D   +          
Sbjct: 68  NLNIYH---GPIFLNASL---SGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQP 121

Query: 145 --TGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVF------TSKKSKQESEGIAYQW 196
                  Y++   +   +    P ++D+     ++++                 G+ +  
Sbjct: 122 LINIYKDYFYTTPRTDTSN-KIPTLKDV---RGKILLLSENHTKKPLVINSRKFGMQFGA 177

Query: 197 -NYVVENHYGDEGMHSGKCSNRAESVPLNDKTKSLVLVNHFPSIPLKLRSSRDNSKG--- 252
            N V+++ Y    + +        +   +     L  +NH  +  L   + R  +     
Sbjct: 178 PNQVIQDDYNGPSVKTKFKEIVQTAYQASKADNKLF-LNHISATSLTF-TPRQYAAALNN 235

Query: 253 -LIDMVQTCYGAAGNRWANFVAVDF 276
            +   V              + +DF
Sbjct: 236 KVEQFVLNLTSEKVRGL-GILIMDF 259

PyMOL of 2plc

>3ea1_A 1-phosphatidylinositol phosphodiesterase; phosphatidylinositol-specific phospholipase C, PI-PLC, dimer, interfacially impaired; 1.75A {Bacillus thuringiensis} PDB: 3ea2_A* 3ea3_A 1t6m_A 2or2_A 1gym_A* 1ptd_A 1ptg_A* 7ptd_A 2ptd_A 4ptd_A 3ptd_A 6ptd_A 5ptd_A Length = 298	Back alignment and structure

>3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 3v18_A 3v16_A* Length = 306	Back alignment and structure

>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A Length = 339	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		292
2plc_A		274	PI-PLC, phosphatidylinositol-specific phospholipas	100.0
3ea1_A		298	1-phosphatidylinositol phosphodiesterase; phosphat	99.98
3v1h_A		306	1-phosphatidylinositol phosphodiesterase; PI-catio	99.97
3h4x_A		339	Phosphatidylinositol-specific phospholipase C1; PI	99.8
2zkm_X		799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	98.34
1djx_A		624	PLC-D1, phosphoinositide-specific phospholipase C,	98.31
3qr0_A		816	Phospholipase C-beta (PLC-beta); PH domain, EF han	98.23
3ohm_B		885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	98.09

>2plc_A PI-PLC, phosphatidylinositol-specific phospholipase C; hydrolase, phospholipid degradation, virulence factor of human pathogen; 2.00A {Listeria monocytogenes} SCOP: c.1.18.2 PDB: 1aod_A*	Back alignment and structure

Probab=100.00  E-value=1.2e-37  Score=283.82  Aligned_cols=245  Identities=16%  Similarity=0.230  Sum_probs=156.5

Q ss_pred             CCCccCCceeeeccCccCCCCCCCCCCcccccccCCchhHHHHHHccCcEEEEEEEeeCCcEEEEecCCCCcccCCCccC
Q 041719           25 NDSLPFNKYAFLTTHNSFAISEGRHSGLFSLVITNQDDKITQQLNHGVRALMLDTYDYKNDIWLCHASKGKCEDYTSFGP  104 (292)
Q Consensus        25 ~~~~pl~~l~ipGTHnS~~~~~~~~~g~~~~~~~nQ~~si~~QL~~GvR~ldlrv~~~~~~~~l~H~~~~~C~~~~~~~~  104 (292)
                      .+++||++++|||||||+++......+....++.||+.+|++||++||||||||++   +++++||+.   |..   ..+
T Consensus        11 ~~~~~l~~l~ipGtHdS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GvR~ldlr~~---~~~~~~H~~---~~~---~~~   81 (274)
T 2plc_A           11 PDTTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAK---DNLNIYHGP---IFL---NAS   81 (274)
T ss_dssp             CTTCBGGGSEEEEETTTTTTSCSHHHHHTHHHHCCCSSCHHHHHHTTCCEEEEEEC---TTSEEEETT---EEE---EEE
T ss_pred             CCCCeeeeeeeeeecchhhccCCCccccccccccCCCcCHHHHHHhCCcEEEEEEC---CcEEEEEcC---CCC---CCC
Confidence            56899999999999999998732100111247999999999999999999999999   789999997   632   268


Q ss_pred             HHHHHHHHHHHHhcCCCCeEEEeeccccCCcchh----hHHHhhcCcCceeecCCCCCCCCCCCCcHHHHHhCCcEEEEE
Q 041719          105 AREVFKEIEAFLSANKSEIVTLFLEDYVETPKGL----TKVFNETGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVF  180 (292)
Q Consensus       105 l~d~L~ei~~fL~~nP~EvVil~l~~~~~~~~~~----~~~~~~~~l~~~~~~p~~~~~~~~~wPTL~el~~~gkrvivf  180 (292)
                      ++++|.+|++||++||+|||+|.+++.......+    ..++  .++++++|+|+.. .....||||+||  +||||||+
T Consensus        82 ~~~~L~~i~~fL~~~P~EvVil~~~~~~~~~~~~~~~~~~l~--~~l~~~~~~~~~~-~~~~~~pTL~e~--rGK~vlv~  156 (274)
T 2plc_A           82 LSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLI--NIYKDYFYTTPRT-DTSNKIPTLKDV--RGKILLLS  156 (274)
T ss_dssp             HHHHHHHHHHHHHHSTTCCEEEEEEETTCSCSHHHHHHHHHH--HHTGGGBCEEESS-CCCCCCCBTTTT--TTCEEEEE
T ss_pred             HHHHHHHHHHHHHhCCCceEEEEEEeCCCCCCcHHHHHHHHH--HHhhceeecCccc-ccCCCCCCHHHh--CCCEEEEE
Confidence            9999999999999999999999999632222222    2223  5788999987532 234689999999  59999988


Q ss_pred             EcCCCCc---CcCCcccccc---cccccCCCCCCCC-cc---ccc-CCCCCCCCCCcCCceEEeeeCCCC---c-ccccc
Q 041719          181 TSKKSKQ---ESEGIAYQWN---YVVENHYGDEGMH-SG---KCS-NRAESVPLNDKTKSLVLVNHFPSI---P-LKLRS  245 (292)
Q Consensus       181 ~~~~~~~---~~~~~~~~~~---~~~e~~~~~~~~~-~~---~C~-~r~~~~~l~~~~~~lfl~nhf~~~---P-~~~~a  245 (292)
                      .+.....   +...+.+.|.   ...++.|...+.. .+   .+. .+...      ....+++||....   + -...|
T Consensus       157 ~~~~~~~~~~~~~~~~~~w~~~~~~iqD~y~~~~~~~K~~~i~~~l~~a~~------~~~~~~iN~~S~~~~~~~p~~~A  230 (274)
T 2plc_A          157 ENHTKKPLVINSRKFGMQFGAPNQVIQDDYNGPSVKTKFKEIVQTAYQASK------ADNKLFLNHISATSLTFTPRQYA  230 (274)
T ss_dssp             ESTTCSCEEETTEEESEETTCTTEEEECCCBSCCHHHHHHHHHHHHHHHHH------CSSSEEEEECCCBCSSSCHHHHH
T ss_pred             eCCCCCCCCcCcccccccCCCCCccccccCCCCcHHHHHHHHHHHHHHhhc------CCCCeEEEEEcccCCCCCHHHHH
Confidence            7643210   0111122231   1244444332210 00   111 01000      1124558886531   1 11122


Q ss_pred             cCCCchhHHHHHHHhccCCCCCcceEEEEeccCCCChHHHHHHhcCC
Q 041719          246 SRDNSKGLIDMVQTCYGAAGNRWANFVAVDFYRKGEAFQAIDKINNG  292 (292)
Q Consensus       246 ~~~n~~~l~~~~~~C~~~~~~r~pNfv~vDF~~~g~~~~~v~~lN~~  292 (292)
                      ...|. .+......|.... .+.+|||++||++ ++++++|+++|..
T Consensus       231 ~~~n~-~l~~~l~~~~~~~-~~~~gIV~~DFv~-~~~i~~vI~~N~~  274 (274)
T 2plc_A          231 AALNN-KVEQFVLNLTSEK-VRGLGILIMDFPE-KQTIKNIIKNNKF  274 (274)
T ss_dssp             HHHHH-HHHHHHHHHHHTT-CCCCEEEEESSCC-HHHHHHHHTTSCC
T ss_pred             HHHhH-HHHHHHHHHhcCC-CCcccEEEEeCCC-chhHHHHHhccCC
Confidence            22221 1222333343333 3459999999998 7899999999974

PyMOL of 2plc

>3ea1_A 1-phosphatidylinositol phosphodiesterase; phosphatidylinositol-specific phospholipase C, PI-PLC, dimer, interfacially impaired; 1.75A {Bacillus thuringiensis} SCOP: c.1.18.2 PDB: 3ea2_A* 3ea3_A 1t6m_A 2or2_A 1gym_A* 1ptd_A 1ptg_A* 7ptd_A 2ptd_A 4ptd_A 3ptd_A 6ptd_A 5ptd_A	Back alignment and structure

>3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 4f2b_A* 4f2u_A* 4f2t_A 3v18_A 3v16_A*	Back alignment and structure

>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A	Back alignment and structure

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B	Back alignment and structure

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A	Back alignment and structure

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A	Back alignment and structure

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		292
d2ptda_		296	c.1.18.2 (A:) Phosphatidylinositol-specific phosph	5e-37
d2plca_		274	c.1.18.2 (A:) Phosphatidylinositol-specific phosph	3e-36

>d2ptda_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Bacillus cereus [TaxId: 1396]} Length = 296	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Bacterial PLC
domain: Phosphatidylinositol-specific phospholipase C
species: Bacillus cereus [TaxId: 1396]

 Score =  131 bits (329), Expect = 5e-37
 Identities = 42/286 (14%), Positives = 80/286 (27%), Gaps = 29/286 (10%)

Query: 25  NDSLPFNKYAFLTTHNSFAISEGRHSGLFSLVITNQDDKITQQLNHGVRALMLDT-YDYK 83
            DS+P  + +   TH+S          +  +    Q+     Q++HG R   +       
Sbjct: 18  PDSIPLARISIPGTHDSGTFKLQN--PIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDD 75

Query: 84  NDIWLCHASKGKCEDYTSFGPAREVFKEIEAFLSANKSEIVTLFLEDYVETPKGLTKVFN 143
           N I L H   G    Y +     E   E + FL  N SE + + L+   E  KG    F+
Sbjct: 76  NTIVLHH---GPLYLYVTL---HEFINEAKQFLKDNPSETIIMSLKKEYEDMKGAEDSFS 129

Query: 144 ETGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVFTSKKSKQESEGIAYQWNYVVENH 203
            T   KY+     +   G     + D       L  ++            +  N      
Sbjct: 130 STFEKKYFVDPIFLKTEG--NIKLGDARGKIVLLKRYSGSNEPGGYNNFYWPDNETFTTT 187

Query: 204 YGDEGMHS-------------GKCSNRAESVPLNDKTKSLVLVNHFPSIPLKLRSS--RD 248
                  +                 +  +    N +  + + +N           +    
Sbjct: 188 VNQNANVTVQEKYKVSYDEKVKSIKDTMDETMNNSEDLNHLYINFTSLSSGGTAWNSPYY 247

Query: 249 NSKGLIDMVQTCYGAAGNRWANFVAVDFY---RKGEAFQAIDKINN 291
            +  +   +             +V  D+         +Q + + N 
Sbjct: 248 YASYINPEIANYIKQKNPARVGWVIQDYINEKWSPLLYQEVIRANK 293

PyMOL of d2ptda_

>d2plca_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Listeria monocytogenes [TaxId: 1639]} Length = 274	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		292
d2plca_		274	Phosphatidylinositol-specific phospholipase C {Lis	100.0
d2ptda_		296	Phosphatidylinositol-specific phospholipase C {Bac	100.0
d1qasa3		327	Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus n	98.71
d2zkmx4		349	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	98.43
d1vd6a1		217	Putative glycerophosphodiester phosphodiesterase T	82.91
d1zcca1		240	Glycerophosphodiester phosphodiesterase UgpQ {Agro	80.9

>d2plca_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Listeria monocytogenes [TaxId: 1639]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Bacterial PLC
domain: Phosphatidylinositol-specific phospholipase C
species: Listeria monocytogenes [TaxId: 1639]

Probab=100.00  E-value=2e-40  Score=298.93  Aligned_cols=253  Identities=16%  Similarity=0.219  Sum_probs=167.7

Q ss_pred             CCCCccCCceeeeccCccCCCCCCCCCCcccccccCCchhHHHHHHccCcEEEEEEEeeCCcEEEEecCCCCcccCCCcc
Q 041719           24 KNDSLPFNKYAFLTTHNSFAISEGRHSGLFSLVITNQDDKITQQLNHGVRALMLDTYDYKNDIWLCHASKGKCEDYTSFG  103 (292)
Q Consensus        24 ~~~~~pl~~l~ipGTHnS~~~~~~~~~g~~~~~~~nQ~~si~~QL~~GvR~ldlrv~~~~~~~~l~H~~~~~C~~~~~~~  103 (292)
                      +++++||++|+|||||||+++...........|+.||..+|++||++||||||||++   +++++|||.   |..   +.
T Consensus        10 l~~~~~l~~l~ipGtHnS~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GvR~~dlr~~---~~~~~~Hg~---~~~---~~   80 (274)
T d2plca_          10 LPDTTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAK---DNLNIYHGP---IFL---NA   80 (274)
T ss_dssp             SCTTCBGGGSEEEEETTTTTTSCSHHHHHTHHHHCCCSSCHHHHHHTTCCEEEEEEC---TTSEEEETT---EEE---EE
T ss_pred             CCCCcEeeheecccccccccccCCCCCcccccccccccccHHHHHHhCCeEEEeeeC---CceEEEEEe---ecc---ce
Confidence            367899999999999999998732111111248999999999999999999999984   789999985   432   26


Q ss_pred             CHHHHHHHHHHHHhcCCCCeEEEeeccccCCcchhhHHHhh--cCcCceeecCCCCCCCCCCCCcHHHHHhCCcEEEEEE
Q 041719          104 PAREVFKEIEAFLSANKSEIVTLFLEDYVETPKGLTKVFNE--TGLMKYWFPVSKMPQNGQDWPLVRDMVASNQRLVVFT  181 (292)
Q Consensus       104 ~l~d~L~ei~~fL~~nP~EvVil~l~~~~~~~~~~~~~~~~--~~l~~~~~~p~~~~~~~~~wPTL~el~~~gkrvivf~  181 (292)
                      ++.++|++|++||++||+|||+|+|++.....+.+..+++.  ..+.++++++... .....||||+||+  ||+||++.
T Consensus        81 ~~~~~L~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ptl~e~~--gk~vi~~~  157 (274)
T d2plca_          81 SLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRT-DTSNKIPTLKDVR--GKILLLSE  157 (274)
T ss_dssp             EHHHHHHHHHHHHHHSTTCCEEEEEEETTCSCSHHHHHHHHHHHHTGGGBCEEESS-CCCCCCCBTTTTT--TCEEEEEE
T ss_pred             eHHHHHHHHHHHHHhCCCceEEEEEEecCCCchHHHHHHHHHHHHhhcccccCccc-cccCCCCChHHhC--CCEEEEec
Confidence            89999999999999999999999999643333444444433  4577888865433 2345899999996  88877775


Q ss_pred             cCCCCc-----CcCCccccc-ccccccCCCCCCCCcccccCCCCCCCCCCcCCceEEeeeCCCCcc----cccccCCCch
Q 041719          182 SKKSKQ-----ESEGIAYQW-NYVVENHYGDEGMHSGKCSNRAESVPLNDKTKSLVLVNHFPSIPL----KLRSSRDNSK  251 (292)
Q Consensus       182 ~~~~~~-----~~~~~~~~~-~~~~e~~~~~~~~~~~~C~~r~~~~~l~~~~~~lfl~nhf~~~P~----~~~a~~~n~~  251 (292)
                      ......     ...++.+.| .+.+++.|..+......|.....-.....+...+ .+|++...+.    ...|...| .
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~in~~s~~~~~~~p~~~A~~~n-~  235 (274)
T d2plca_         158 NHTKKPLVINSRKFGMQFGAPNQVIQDDYNGPSVKTKFKEIVQTAYQASKADNKL-FLNHISATSLTFTPRQYAAALN-N  235 (274)
T ss_dssp             STTCSCEEETTEEESEETTCTTEEEECCCBSCCHHHHHHHHHHHHHHHHHCSSSE-EEEECCCBCSSSCHHHHHHHHH-H
T ss_pred             CCcccccccccCccCccCCCCCceeeccCCCCchhhhHHHHHHHHHhccccCCce-EEEEEecCCCCCCHHHHHHHHh-H
Confidence            543221     112334443 6778888877653211111100000000011234 4688753321    11222222 2


Q ss_pred             hHHHHHHHhccCCCCCcceEEEEeccCCCChHHHHHHhcCC
Q 041719          252 GLIDMVQTCYGAAGNRWANFVAVDFYRKGEAFQAIDKINNG  292 (292)
Q Consensus       252 ~l~~~~~~C~~~~~~r~pNfv~vDF~~~g~~~~~v~~lN~~  292 (292)
                      .+......|....+ |.||||++||++ .+++++|+++|..
T Consensus       236 ~i~~~~~~~~~~~~-~~~niV~~DFv~-~~~v~~vI~~N~~  274 (274)
T d2plca_         236 KVEQFVLNLTSEKV-RGLGILIMDFPE-KQTIKNIIKNNKF  274 (274)
T ss_dssp             HHHHHHHHHHHTTC-CCCEEEEESSCC-HHHHHHHHTTSCC
T ss_pred             HHHHHHHHHhhcCC-CCCcEEEEcCCC-chHHHHHHHHcCC
Confidence            34566788887665 569999999997 4599999999963

PyMOL of d2plca_

>d2ptda_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Bacillus cereus [TaxId: 1396]}	Back information, alignment and structure

>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1vd6a1 c.1.18.3 (A:8-224) Putative glycerophosphodiester phosphodiesterase TTHB141 {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1zcca1 c.1.18.3 (A:1-240) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]}	Back information, alignment and structure