Citrus Sinensis ID: 041743


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440
MSSSSALVSFFFLLTLIFAVANAQVPANETFKFVNEGGLGEYFNEYNANYRMSGIYNDPFQLGFYNTTPNAFTLALRLGIKKQEPVFRWVWEANRGKPVRENAVFSLGTDGNLVLAEADGTVVWQSNTANKGVLGFGLFPNGNMVLHDSKGNFIWQIFDYPTDTLLVGQSLRVGRVTKLVSRLSVKENVDGPYRFVMEPRRLAFYYKSSNVPRPILYYTFPFSYAGLKNLTLKSSPETRHYKLTLDSSDGDSFIMDRPKYNSTISFLRLGIDGNLRVFTYSQEVDFLPEEERFTLFGKISRGNDGINWGNECQMPDRCGKLGLCEDEQCVACPTENGLIGWSKENCVPTQVNFCGTKDFHYYKLESVVHYMCTYNYFDGIGANISIEACGKRCSSDCRCVGYFYDTSFPTCWIAFDLKTLTKAPDSPIVGFIKVSNKEKS
ccccHHHHHHHHHHHHHHHHHcccccccccEEEccccccccEEEEEcccEEEEEEcccEEEEEEEcccccccccEEEEEEEcccccccEEEEcccccccccccEEEEcccccEEEEcccccEEEEcccccccccEEEEEccccEEEEcccccEEEEcccccccccccccccccccEEEEEEcccccccccccEEEEEEccccEEEEEcccccccEEEEcccccccEEEEEEcccccccEEEEEEEEcccccEEEEEEcccccEEEEEEEcccccEEEEEEEcccccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccHHHHHHHHHcccccEEEEEcccccEEEEccccEEEEEccccccEEEEEEcccccc
ccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccEEEEEEccccEEEccccEEEEEEEccccccccccEEEEEEEEccccEEEEEEEcccccccccEEEEEccccEEEEEccccEEEEccccccccHHHEEcccccEEEEcccccEEEEEccccccccccccccccccccEEEccccccccccccEEEEEccccccEEEEEcccEEEEEEEccccccEEEccccccccccEEEEEEEEcccccEEEEEEEEccccEEEEEEEccccEEEEEEEEcccccccccccEEEEEEccccccccccccccccHHHcccccEcccccccccccccccccccccccEEccEccccccccEEEcccccccccHHHcccccccccccHHHHHHHHHHccccEEEEEEcccccEEEEccHHHHHHHccccccEEEEEEccccc
mssssalvSFFFLLTLIFAVanaqvpanetfkfvnegglgeyfneynanyrmsgiyndpfqlgfynttpNAFTLALRLgikkqepvFRWVWeanrgkpvrenavfslgtdgnlvlaeadgtvvwqsntankgvlgfglfpngnmvlhdskgnfiwqifdyptdtllvgqslrvgRVTKLVSRLSvkenvdgpyrfvmeprrlafyykssnvprpilyytfpfsyaglknltlksspetrhykltldssdgdsfimdrpkynstiSFLRLGIDGNLRVFTysqevdflpeeeRFTLFgkisrgndginwgnecqmpdrcgklglcedeqcvacptengligwskencvptqvnfcgtkdfhyyKLESVVHYMCTYnyfdgiganisieacgkrcssdcrcvgyfydtsfptcwiafdlktltkapdspivgFIKVSNKEKS
MSSSSALVSFFFLLTLIFAVANAQVPANETFKFVNEGGLGEYFNEYNANYRMSGIYNDPFQLGFYNTTPNAFTLALRLGIKKQEPVFRWVWEANRGKPVRENAVFSLGTDGNLVLAEADGTVVWQSNTANKGVLGFGLFPNGNMVLHDSKGNFIWQIFDYPTDTLLVGQSLrvgrvtklvsrlsvkenvdgpyrfvmepRRLAFYykssnvprPILYYTFPFSYAGLKNltlksspetRHYKltldssdgdsfiMDRPKYNSTISFLRLGIDGNLRVFTYSQEVDFLPEEERFTLFGKISRGNDGINWGNECQMPDRCGKLGLCEDEQCVACPTENGLIGWSKENCVPTQVNFCGTKDFHYYKLESVVHYMCTYNYFDGIGANISIEACGKRCSSDCRCVGYFYDTSFPTCWIAFDLKTLtkapdspivgfikvsnkeks
MssssalvsfffllTLIFAVANAQVPANETFKFVNEGGLGEYFNEYNANYRMSGIYNDPFQLGFYNTTPNAFTLALRLGIKKQEPVFRWVWEANRGKPVRENAVFSLGTDGNLVLAEADGTVVWQSNTANKGVLGFGLFPNGNMVLHDSKGNFIWQIFDYPTDTLLVGQSLRVGRVTKLVSRLSVKENVDGPYRFVMEPRRLAFYYKSSNVPRPILYYTFPFSYAGLKNLTLKSSPETRHYKLTLDSSDGDSFIMDRPKYNSTISFLRLGIDGNLRVFTYSQEVDFLPEEERFTLFGKISRGNDGINWGNECQMPDRCGKLGLCEDEQCVACPTENGLIGWSKENCVPTQVNFCGTKDFHYYKLESVVHYMCTYNYFDGIGANISIEACGKRCSSDCRCVGYFYDTSFPTCWIAFDLKTLTKAPDSPIVGFIKVSNKEKS
******LVSFFFLLTLIFAVANAQVPANETFKFVNEGGLGEYFNEYNANYRMSGIYNDPFQLGFYNTTPNAFTLALRLGIKKQEPVFRWVWEANRGKPVRENAVFSLGTDGNLVLAEADGTVVWQSNTANKGVLGFGLFPNGNMVLHDSKGNFIWQIFDYPTDTLLVGQSLRVGRVTKLVSRLSVKENVDGPYRFVMEPRRLAFYYKSSNVPRPILYYTFPFSYAGLKNLTLK*******YKL********SFIMDRPKYNSTISFLRLGIDGNLRVFTYSQEVDFLPEEERFTLFGKISRGNDGINWGNECQMPDRCGKLGLCEDEQCVACPTENGLIGWSKENCVPTQVNFCGTKDFHYYKLESVVHYMCTYNYFDGIGANISIEACGKRCSSDCRCVGYFYDTSFPTCWIAFDLKTLTKAPDSPIVGFIK*******
****SAL*SFFFLLTLIFAVANAQVPANETFKF******************MSGIYNDPFQLGFYNTTPNAFTLALRLGIKKQEPVFRWVWEANRGKPVRENAVFSLGTDGNLVLAEADGTVVWQSNTANKGVLGFGLFPNGNMVLHDSKGNFIWQIFDYPTDTLLVGQSLRVGRVTKLVSRLSVKENVDGPYRFVMEPRRLAFYYKSSNVPRPILYYTFPFSYAGLKNLTLKSSPETRHYKLTLDSSDGDSFIMDRPKYNSTISFLRLGIDGNLRVFTYSQEVDFLPEEERFTLFGKISRGNDGINWGNECQMPDRCGKLGLCEDEQCVACPTENGLIGWSKENCVP*QV**C*TKDFHYYKLESVVHYMCTYNYFDGIGANISIEACGKRCSSDCRCVGYFYDTSFPTCWIAFDLKTLTKAPDSPIVGFI*VSN****
MSSSSALVSFFFLLTLIFAVANAQVPANETFKFVNEGGLGEYFNEYNANYRMSGIYNDPFQLGFYNTTPNAFTLALRLGIKKQEPVFRWVWEANRGKPVRENAVFSLGTDGNLVLAEADGTVVWQSNTANKGVLGFGLFPNGNMVLHDSKGNFIWQIFDYPTDTLLVGQSLRVGRVTKLVSRLSVKENVDGPYRFVMEPRRLAFYYKSSNVPRPILYYTFPFSYAGLKNLTLKSSPETRHYKLTLDSSDGDSFIMDRPKYNSTISFLRLGIDGNLRVFTYSQEVDFLPEEERFTLFGKISRGNDGINWGNECQMPDRCGKLGLCEDEQCVACPTENGLIGWSKENCVPTQVNFCGTKDFHYYKLESVVHYMCTYNYFDGIGANISIEACGKRCSSDCRCVGYFYDTSFPTCWIAFDLKTLTKAPDSPIVGFIKVSNKEKS
***SSALVSFFFLLTLIFAVANAQVPANETFKFVNEGGLGEYFNEYNANYRMSGIYNDPFQLGFYNTTPNAFTLALRLGIKKQEPVFRWVWEANRGKPVRENAVFSLGTDGNLVLAEADGTVVWQSNTANKGVLGFGLFPNGNMVLHDSKGNFIWQIFDYPTDTLLVGQSLRVGRVTKLVSRLSVKENVDGPYRFVMEPRRLAFYYKSSNVPRPILYYTFPFSYAGLKNLTLKSSPETRHYKLTLDSSDGDSFIMDRPKYNSTISFLRLGIDGNLRVFTYSQEVDFLPEEERFTLFGKISRGNDGINWGNECQMPDRCGKLGLCEDEQCVACPTENGLIGWSKENCVPTQVNFCGTKDFHYYKLESVVHYMCTYNYFDGIGANISIEACGKRCSSDCRCVGYFYDTSFPTCWIAFDLKTLTKAPDSPIVGFIKVSNK***
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSSSSALVSFFFLLTLIFAVANAQVPANETFKFVNEGGLGEYFNEYNANYRMSGIYNDPFQLGFYNTTPNAFTLALRLGIKKQEPVFRWVWEANRGKPVRENAVFSLGTDGNLVLAEADGTVVWQSNTANKGVLGFGLFPNGNMVLHDSKGNFIWQIFDYPTDTLLVGQSLRVGRVTKLVSRLSVKENVDGPYRFVMEPRRLAFYYKSSNVPRPILYYTFPFSYAGLKNLTLKSSPETRHYKLTLDSSDGDSFIMDRPKYNSTISFLRLGIDGNLRVFTYSQEVDFLPEEERFTLFGKISRGNDGINWGNECQMPDRCGKLGLCEDEQCVACPTENGLIGWSKENCVPTQVNFCGTKDFHYYKLESVVHYMCTYNYFDGIGANISIEACGKRCSSDCRCVGYFYDTSFPTCWIAFDLKTLTKAPDSPIVGFIKVSNKEKS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query440 2.2.26 [Sep-21-2011]
Q39688389 Epidermis-specific secret N/A no 0.804 0.910 0.510 1e-102
O65238 872 G-type lectin S-receptor- no no 0.720 0.363 0.249 7e-21
Q9FLV4 872 G-type lectin S-receptor- no no 0.775 0.391 0.266 7e-18
P17840435 S-locus-specific glycopro N/A no 0.715 0.724 0.259 2e-17
P17801 817 Putative receptor protein N/A no 0.736 0.396 0.245 1e-14
P22553435 S-locus-specific glycopro N/A no 0.711 0.719 0.252 1e-13
Q39203 797 G-type lectin S-receptor- no no 0.752 0.415 0.219 1e-12
Q09092 857 Putative serine/threonine N/A no 0.702 0.360 0.250 4e-12
O64477 828 G-type lectin S-receptor- no no 0.722 0.384 0.235 4e-12
P07761436 S-locus-specific glycopro N/A no 0.695 0.701 0.257 4e-12
>sp|Q39688|EP1G_DAUCA Epidermis-specific secreted glycoprotein EP1 OS=Daucus carota GN=EP1 PE=1 SV=1 Back     alignment and function desciption
 Score =  372 bits (954), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/376 (51%), Positives = 250/376 (66%), Gaps = 22/376 (5%)

Query: 8   VSFFFLLTLIFAVANAQVPANETFKFVNEGGLGEYFNEYNANYRMSGIYNDPFQLGFYNT 67
           +  FF+  + F   +  VPANETFKFVNEG LG+Y +EY  +YR    +  PFQL FYN 
Sbjct: 11  ILLFFIQRIDFC--HTLVPANETFKFVNEGELGQYISEYFGDYRPLDPFTSPFQLCFYNQ 68

Query: 68  TPNAFTLALRLGIKKQEPVFRWVWEANRGKPVRENAVFSLGTDGNLVLAEADGTVVWQSN 127
           TP AFTLALR+G+++ E + RWVWEANRG PV ENA  + G DGNLVLA ++G V WQ++
Sbjct: 69  TPTAFTLALRMGLRRTESLMRWVWEANRGNPVDENATLTFGPDGNLVLARSNGQVAWQTS 128

Query: 128 TANKGVLGFGLFPNGNMVLHDSKGNFIWQIFDYPTDTLLVGQSLRVGRVTKLVSRLSVKE 187
           TANKGV+G  + PNGNMVL+DSKG F+WQ FD PTDTLLVGQSL++G VTKLVSR S  E
Sbjct: 129 TANKGVVGLKILPNGNMVLYDSKGKFLWQSFDTPTDTLLVGQSLKMGAVTKLVSRASPGE 188

Query: 188 NVDGPYRFVMEPRRLAFYYKSSNVPRPILYYTFPF-----SYAGLKNLTLKSSPETRH-- 240
           NV+GPY  VMEP+ L  YYK +  P+PI YY+F           L+N+T +   E     
Sbjct: 189 NVNGPYSLVMEPKGLHLYYKPTTSPKPIRYYSFSLFTKLNKNESLQNVTFEFENENDQGF 248

Query: 241 -----YKLTLDSSDGDSFIMDRPKYNSTISFLRLGIDGNLRVFTYSQEVDFLPEEERFTL 295
                 K    +S G + I++R KYN+T+SFLRL IDGN++++TY+ +VD+   E  +TL
Sbjct: 249 AFLLSLKYGTSNSLGGASILNRIKYNTTLSFLRLEIDGNVKIYTYNDKVDYGAWEVTYTL 308

Query: 296 FGKISRGNDGINWG------NECQMPDRCGKLGLCEDEQCVACPTENG-LIGWSKENCVP 348
           F K       ++        +ECQ+P +CG  GLCE+ QCV CPT +G ++ WSK  C P
Sbjct: 309 FLKAPPPLFQVSLAATESESSECQLPKKCGNFGLCEESQCVGCPTSSGPVLAWSK-TCEP 367

Query: 349 TQVNFCGTKDFHYYKL 364
            +++ CG KDFHY KL
Sbjct: 368 PKLSSCGPKDFHYNKL 383




May be involved in the limitation of water flow through the outer epidermal cell wall, either by direct modification of wall structure or as a signal instructing the protoplast to restrict water transport across the cell wall.
Daucus carota (taxid: 4039)
>sp|O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2 Back     alignment and function description
>sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1 Back     alignment and function description
>sp|P17840|SLSG3_BRAOL S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2 Back     alignment and function description
>sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2 Back     alignment and function description
>sp|P22553|SLSG2_BRAOA S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1 Back     alignment and function description
>sp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS=Arabidopsis thaliana GN=SD22 PE=1 SV=1 Back     alignment and function description
>sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2 Back     alignment and function description
>sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1 Back     alignment and function description
>sp|P07761|SLSG6_BRAOL S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query440
224114796428 predicted protein [Populus trichocarpa] 0.947 0.974 0.580 1e-137
224114792428 predicted protein [Populus trichocarpa] 0.947 0.974 0.580 1e-137
356549665435 PREDICTED: epidermis-specific secreted g 0.947 0.958 0.560 1e-135
224117046426 predicted protein [Populus trichocarpa] 0.959 0.990 0.561 1e-134
224117048426 predicted protein [Populus trichocarpa] 0.959 0.990 0.561 1e-134
383932356440 epidermis-specific secreted glycoprotein 0.920 0.920 0.568 1e-132
449483155440 PREDICTED: epidermis-specific secreted g 0.95 0.95 0.547 1e-132
359493788429 PREDICTED: epidermis-specific secreted g 0.943 0.967 0.546 1e-131
449483158440 PREDICTED: epidermis-specific secreted g 0.925 0.925 0.566 1e-131
449438929440 PREDICTED: epidermis-specific secreted g 0.922 0.922 0.565 1e-130
>gi|224114796|ref|XP_002316859.1| predicted protein [Populus trichocarpa] gi|222859924|gb|EEE97471.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 252/434 (58%), Positives = 308/434 (70%), Gaps = 17/434 (3%)

Query: 11  FFLLTLIFAVA---NAQVPANETFKFVNEGGLGEYFNEYNANYRMSGIYNDPFQLGFYNT 67
            F L L+F+++   +A VP + TFK+VNEG  GEY +EY  +YR   I   PFQL FYNT
Sbjct: 5   LFSLCLLFSISFTVHATVPPSSTFKYVNEGEFGEYISEYVPDYRPLPIGTSPFQLIFYNT 64

Query: 68  TPNAFTLALRLGIKKQEPVFRWVWEANRGKPVRENAVFSLGTDGNLVLAEADGTVVWQSN 127
           TPNA+TLALR+G  + E   RWVWEANRG PVRENA  +LG DGNLVLA+ADG V WQ+N
Sbjct: 65  TPNAYTLALRMGTVRSESTMRWVWEANRGNPVRENATLTLGGDGNLVLADADGRVAWQTN 124

Query: 128 TANKGVLGFGLFPNGNMVLHDSKGNFIWQIFDYPTDTLLVGQSLRVGRVTKLVSRLSVKE 187
           TANKGV+G  L  NGNMVLHDSKGNFIWQ FD PTDTLLVGQSLRVG VT+LVSR S   
Sbjct: 125 TANKGVVGLQLLSNGNMVLHDSKGNFIWQSFDSPTDTLLVGQSLRVGGVTRLVSRASETH 184

Query: 188 NVDGPYRFVMEPRRLAFYYKSSNVPRPILYYTFPFSYAG-LKNLTLKSSP---ETRHYKL 243
           N DG Y  VMEP+RLA YYKS N P+P +YY F   Y G L+N TL  +P   +     L
Sbjct: 185 NSDGAYSLVMEPKRLAMYYKSPNSPKPYIYYDFDSVYNGRLQNATLNCAPNGYDDLANDL 244

Query: 244 TLDSSDGDSFIMDRPKYNSTISFLRLGIDGNLRVFTYSQEVDFLPEEERFTLFGKISRGN 303
           TLD S G++  + RPKYNST+SFLR+GIDG+L+++TY+ +VD+   EE +TLF +     
Sbjct: 245 TLDLSTGNAMTLARPKYNSTLSFLRIGIDGSLKMYTYNNKVDYQAWEETYTLFSR----- 299

Query: 304 DGINWGNECQMPDRCGKLGLCEDEQCVACPTENGLIGWSKENCVPTQVNFCGTKDFHYYK 363
           DG   G ECQ+P+RCGK GLCED QCVACP  +GL+GWSK  C P +   CG+K+F+YYK
Sbjct: 300 DGFPEG-ECQLPERCGKFGLCEDSQCVACPLPSGLMGWSKY-CEPVKPPACGSKNFYYYK 357

Query: 364 LESVVHYMCTYNYFDGIGANISIEACGKRCSSDCRCVGYFYDTSFPTCWIAFDLKTLTKA 423
           LE V H M  Y    G GA +  + CGK+CSSDC+C+GYFY+     CWIA+DL+TLTK 
Sbjct: 358 LEGVDHSMSKYG--SGSGA-MKEDDCGKKCSSDCKCLGYFYNKEISKCWIAYDLQTLTKV 414

Query: 424 PDSPIVGFIKVSNK 437
            +S  VG+IK   +
Sbjct: 415 ANSTHVGYIKAPKQ 428




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114792|ref|XP_002316858.1| predicted protein [Populus trichocarpa] gi|222859923|gb|EEE97470.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356549665|ref|XP_003543212.1| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Glycine max] Back     alignment and taxonomy information
>gi|224117046|ref|XP_002317461.1| predicted protein [Populus trichocarpa] gi|222860526|gb|EEE98073.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224117048|ref|XP_002317462.1| predicted protein [Populus trichocarpa] gi|222860527|gb|EEE98074.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|383932356|gb|AFH57275.1| epidermis-specific secreted glycoprotein EP1-like protein [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|449483155|ref|XP_004156508.1| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359493788|ref|XP_002285446.2| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449483158|ref|XP_004156509.1| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449438929|ref|XP_004137240.1| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query440
TAIR|locus:2037568443 AT1G78860 [Arabidopsis thalian 0.936 0.930 0.467 1.3e-102
TAIR|locus:2037508441 AT1G78850 [Arabidopsis thalian 0.938 0.936 0.452 8.8e-102
TAIR|locus:4010713447423 AT1G16905 [Arabidopsis thalian 0.909 0.945 0.433 1.8e-87
UNIPROTKB|Q39688389 EP1 "Epidermis-specific secret 0.622 0.704 0.555 1.6e-79
TAIR|locus:2037548455 AT1G78830 [Arabidopsis thalian 0.752 0.727 0.406 3.6e-66
TAIR|locus:2037563455 AT1G78820 [Arabidopsis thalian 0.752 0.727 0.386 3.9e-60
TAIR|locus:2088619439 AT3G12000 [Arabidopsis thalian 0.731 0.733 0.273 9.3e-18
TAIR|locus:2116525 821 SD2-5 "S-domain-2 5" [Arabidop 0.311 0.166 0.333 2.3e-15
TAIR|locus:2182603 872 AT5G35370 [Arabidopsis thalian 0.722 0.364 0.245 1e-13
TAIR|locus:2059103 828 AT2G19130 [Arabidopsis thalian 0.781 0.415 0.239 2.6e-12
TAIR|locus:2037568 AT1G78860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
 Identities = 203/434 (46%), Positives = 280/434 (64%)

Query:    17 IFAV-ANAQVPANETFKFVNEGGLGEYFN-EYNANYRMSGIYNDPFQLGFYNTTPNAFTL 74
             IF V A A+VP ++ F+ VNEGG  +Y   EYN + R    ++D F+L FYNTT NA+TL
Sbjct:    15 IFLVGAQAKVPVDDQFRVVNEGGYTDYSPIEYNPDVRGFVPFSDNFRLCFYNTTQNAYTL 74

Query:    75 ALRLGIKKQEPVFRWVWEANRGKPVRENAVFSLGTDGNLVLAEADGTVVWQSNTANKGVL 134
             ALR+G + QE   RWVWEANRG PV+ENA  + G DGNLVLAEADG VVWQ+NTANKGV+
Sbjct:    75 ALRIGNRAQESTLRWVWEANRGSPVKENATLTFGEDGNLVLAEADGRVVWQTNTANKGVV 134

Query:   135 GFGLFPNGNMVLHDSKGNFIWQIFDYPTDTLLVGQSLRVGRVTKLVSRLSVKENVDGPYR 194
             G  +  NGNMV++DS G F+WQ FD PTDTLLVGQSL++    KLVSRLS   N +GPY 
Sbjct:   135 GIKILENGNMVIYDSNGKFVWQSFDSPTDTLLVGQSLKLNGQNKLVSRLSPSVNANGPYS 194

Query:   195 FVMEPRRLAFYYKSSNVPRPILYYTFPF--SYAGLKNLTLKSSPET-RHYKLTLDSSD-G 250
              VME ++L  YY ++  P+PI YY + F    A L+++T ++  +    + L ++  D G
Sbjct:   195 LVMEAKKLVLYYTTNKTPKPIGYYEYEFFTKIAQLQSMTFQAVEDADTTWGLHMEGVDSG 254

Query:   251 DSF----IMDRPKYNSTISFLRLGIDGNLRVFTYSQEVDFLPEEERFTLFGKISRGNDGI 306
               F     + RPK+N+T+SFLRL  DGN+RV++YS        +  +T F      ND  
Sbjct:   255 SQFNVSTFLSRPKHNATLSFLRLESDGNIRVWSYSTLATSTAWDVTYTAFT-----NDNT 309

Query:   307 NWGNECQMPDRCGKLGLCEDEQCVACPTENGLIGWSKENC-VPTQVNFCGTKDFHYYKLE 365
             +  +EC++P+ C   GLC+  QC ACP++ GL+GW  E C +P+  + C  K FHY+K+E
Sbjct:   310 DGNDECRIPEHCLGFGLCKKGQCNACPSDIGLLGWD-ETCKIPSLAS-CDPKTFHYFKIE 367

Query:   366 SVVHYMCTYNYFDGIGANISIEACGKRCSSDCRCVGYFYDTSFPTCWIAFDLKTLTKAPD 425
                 +M  YN   G G+  +  ACG +C+ DC+C+G+FY+     CW+ ++LKTLTK  D
Sbjct:   368 GADSFMTKYN---G-GSTTTESACGDKCTRDCKCLGFFYNRKSSRCWLGYELKTLTKTGD 423

Query:   426 SPIVGFIKVSNKEK 439
             + +V ++K  N  K
Sbjct:   424 TSLVAYVKAPNASK 437




GO:0005886 "plasma membrane" evidence=ISM
GO:0030246 "carbohydrate binding" evidence=IEA;ISS
GO:0005618 "cell wall" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
TAIR|locus:2037508 AT1G78850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:4010713447 AT1G16905 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q39688 EP1 "Epidermis-specific secreted glycoprotein EP1" [Daucus carota (taxid:4039)] Back     alignment and assigned GO terms
TAIR|locus:2037548 AT1G78830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037563 AT1G78820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088619 AT3G12000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182603 AT5G35370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q39688EP1G_DAUCANo assigned EC number0.51060.80450.9100N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query440
cd00028116 cd00028, B_lectin, Bulb-type mannose-specific lect 7e-29
smart00108114 smart00108, B_lectin, Bulb-type mannose-specific l 2e-28
pfam01453109 pfam01453, B_lectin, D-mannose binding lectin 5e-27
cd0109884 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain 1e-07
>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information
 Score =  109 bits (274), Expect = 7e-29
 Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 4/106 (3%)

Query: 57  NDPFQLGFYNTTPNAFTLALRLGIKKQEPVFRWVWEANRGKPVRENAVFSLGTDGNLVLA 116
              F+LGF+     +        I  +      VW ANR  P   +   +L +DGNLV+ 
Sbjct: 14  GSLFELGFFKLIMQS---RDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIY 70

Query: 117 EADGTVVWQSNTAN-KGVLGFGLFPNGNMVLHDSKGNFIWQIFDYP 161
           +  GTVVW SNT    G     L  +GN+VL+DS GNF+WQ FDYP
Sbjct: 71  DGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYDSDGNFLWQSFDYP 116


The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116

>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information
>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin Back     alignment and domain information
>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 440
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 99.96
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 99.93
smart00108114 B_lectin Bulb-type mannose-specific lectin. 99.92
PF00954110 S_locus_glycop: S-locus glycoprotein family; Inter 99.82
cd0109884 PAN_AP_plant Plant PAN/APPLE-like domain; present 99.49
PF0827666 PAN_2: PAN-like domain; InterPro: IPR013227 PAN do 99.45
cd0012980 PAN_APPLE PAN/APPLE-like domain; present in N-term 99.24
smart00108114 B_lectin Bulb-type mannose-specific lectin. 98.71
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 98.68
smart0047378 PAN_AP divergent subfamily of APPLE domains. Apple 98.44
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 98.29
cd0110073 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d 97.82
smart0022379 APPLE APPLE domain. Four-fold repeat in plasma kal 94.81
PF1429551 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A. 94.52
PF0002479 PAN_1: PAN domain This Prosite entry concerns appl 94.45
smart0060594 CW CW domain. 88.84
PF0827771 PAN_3: PAN-like domain; InterPro: IPR006583 PAN do 87.29
cd0109980 PAN_AP_HGF Subfamily of PAN/APPLE-like domains; pr 80.92
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information
Probab=99.96  E-value=4.6e-30  Score=220.12  Aligned_cols=103  Identities=48%  Similarity=0.739  Sum_probs=76.6

Q ss_pred             eeEEEeecCCCCccc---CceEEEcCCccEEEEeCCCcEEEEe-cCCCCc--eeEEEEeeCCCeeEeccCCeeEEeeecC
Q 041743           87 FRWVWEANRGKPVRE---NAVFSLGTDGNLVLAEADGTVVWQS-NTANKG--VLGFGLFPNGNMVLHDSKGNFIWQIFDY  160 (440)
Q Consensus        87 ~t~VW~ANr~~pv~~---~~~l~l~~~G~Lvl~~~~~~~vWss-~~~~~~--~~~~~Lld~GNlVl~~~~~~~~WqSFD~  160 (440)
                      +||||+|||++|+..   ..+|.|+.||||+|++..++++|++ ++.+.+  ...|+|+|+|||||+|..+.+|||||||
T Consensus         2 ~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~~   81 (114)
T PF01453_consen    2 RTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFDY   81 (114)
T ss_dssp             --------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTTS
T ss_pred             cccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecCC
Confidence            589999999999943   4899999999999999999999999 666654  7889999999999999999999999999


Q ss_pred             CCcccccCcccccCce----eEEEEcCCCCCCC
Q 041743          161 PTDTLLVGQSLRVGRV----TKLVSRLSVKENV  189 (440)
Q Consensus       161 PTDTLLPGq~L~~~~~----~~L~S~~S~~dps  189 (440)
                      ||||+||+|+|+.+..    ..|+||++.+|||
T Consensus        82 ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   82 PTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             SS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             CccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            9999999999987421    2489999999986



Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation Back     alignment and domain information
>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins Back     alignment and domain information
>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>smart00473 PAN_AP divergent subfamily of APPLE domains Back     alignment and domain information
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information
>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins Back     alignment and domain information
>smart00223 APPLE APPLE domain Back     alignment and domain information
>PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A Back     alignment and domain information
>PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>smart00605 CW CW domain Back     alignment and domain information
>PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>cd01099 PAN_AP_HGF Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query440
1kj1_A109 Lectin I, lecgna 1; BULB lectin, mannose, plant pr 9e-11
1kj1_A109 Lectin I, lecgna 1; BULB lectin, mannose, plant pr 6e-09
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 3e-10
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 2e-08
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 7e-10
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 2e-07
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 8e-09
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 2e-06
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 2e-08
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 2e-04
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 4e-08
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 5e-06
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 3e-07
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 4e-06
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 6e-07
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 3e-06
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 6e-07
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 7e-05
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 7e-07
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 3e-06
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 6e-06
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 9e-06
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 7e-05
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 8e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 Back     alignment and structure
 Score = 57.9 bits (140), Expect = 9e-11
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 88  RWVWEANRGKPVRENAVFSLGTDGNLVLAEADGTVVWQSNTANK-GVLGFGLFPNGNMVL 146
             VW +N G   ++     L +DGN V+ +A+G  +W S++    G     L  +GN+V+
Sbjct: 38  TSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVI 97

Query: 147 HDSKGNFIWQIFDY 160
           + S    IW    Y
Sbjct: 98  YGSD---IWSTGTY 108


>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109 Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query440
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 100.0
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 99.97
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 99.78
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.72
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.72
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.67
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.63
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.62
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.61
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.59
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 99.58
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.49
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 99.47
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 99.47
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 99.38
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 99.33
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 99.31
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 99.22
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 99.22
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 99.14
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 99.12
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 99.12
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 99.07
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 99.03
2ll3_A82 Micronemal protein 4; cell adhesion; NMR {Toxoplas 94.01
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 88.82
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 83.97
4a5v_A161 MIC4, micronemal protein 4; adhesion; NMR {Toxopla 83.96
3hms_A101 Hepatocyte growth factor; HGF/SF, hormone/growth f 82.32
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
Probab=100.00  E-value=8.6e-39  Score=313.05  Aligned_cols=200  Identities=18%  Similarity=0.209  Sum_probs=145.6

Q ss_pred             ceeEeecCCcEEEEEEeCCCCCeEEEEEEeeecCCCceeEEEeecCCCCccc-----CceEEEcCCccEEE--EeCCCcE
Q 041743           50 YRMSGIYNDPFQLGFYNTTPNAFTLALRLGIKKQEPVFRWVWEANRGKPVRE-----NAVFSLGTDGNLVL--AEADGTV  122 (440)
Q Consensus        50 ~~~l~s~~g~F~lGF~~~~~~~f~l~Iw~~~~~~~~~~t~VW~ANr~~pv~~-----~~~l~l~~~G~Lvl--~~~~~~~  122 (440)
                      ++.|+|++|.|+||||+ .. +.|+   |+     +.. +||+|||++||.+     +++|+|+.||+|||  .|++|.+
T Consensus        26 ~~~l~S~~g~F~lgf~~-~~-~~~l---y~-----~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G~Lvl~~~~~~~~~   94 (276)
T 3m7h_A           26 GQYLLSPNQRFKLLLQG-DG-NLVI---QD-----NGA-TVWVANEQQPFSSTIPLRNKKAPLAFYVQYGAFLDDYSRRR   94 (276)
T ss_dssp             TCEEECTTSSEEEEECT-TS-CEEE---EE-----TTE-EEEECSTTSTTEEEEECCCTTCCSEEEESSSEEEEEGGGTE
T ss_pred             CCEEEcCCCcEEEEEEC-CC-CeEE---EC-----CCC-eEEECCCCCCcCCcccccceEEEEeCCCcEEEEEeCCCCCE
Confidence            57899999999999994 33 4444   54     235 8999999999987     67999999999999  7888999


Q ss_pred             EEEecCCC------CceeEEEEeeCCCeeEeccCCeeEEeeecCCCcccccCcc----cccCceeEEEEcCCCCCCCCcc
Q 041743          123 VWQSNTAN------KGVLGFGLFPNGNMVLHDSKGNFIWQIFDYPTDTLLVGQS----LRVGRVTKLVSRLSVKENVDGP  192 (440)
Q Consensus       123 vWss~~~~------~~~~~~~Lld~GNlVl~~~~~~~~WqSFD~PTDTLLPGq~----L~~~~~~~L~S~~S~~dps~G~  192 (440)
                      ||+++++.      .++..|+|+|+|||||+|  +.+||||  ||||||||||+    |..|  ++|   ++.+||++|.
T Consensus        95 vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~--~~~lWqS--~ptdtlLpg~~~~~~l~~g--~~L---~S~~dps~G~  165 (276)
T 3m7h_A           95 VWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD--SLALWNG--TPAIPLVPGAIDSLLLAPG--SEL---VQGVVYGAGA  165 (276)
T ss_dssp             EEEECCCCCCCTTHHHHEEEEECTTSCEEEEE--EEEEEES--CTTSCCCCSCTTCEEECSS--EEE---CTTCEEEETT
T ss_pred             EEEeCCCcccccccCCceEEEEeCCCCEEecC--CceeeCc--ccccccccccccccccccC--ccc---ccCCCCCCce
Confidence            99999865      345789999999999998  7899999  99999999999    5554  567   6678999999


Q ss_pred             eEEeeCCCC-ceeeeccCCCCCceeEEEcCCccCCCcceeeecCCCCceeEEEEecCCCceEEEEccCCCCeEEEEEEcc
Q 041743          193 YRFVMEPRR-LAFYYKSSNVPRPILYYTFPFSYAGLKNLTLKSSPETRHYKLTLDSSDGDSFIMDRPKYNSTISFLRLGI  271 (440)
Q Consensus       193 ysl~l~~~~-l~l~~~~~~~~~~~~YW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~Ld~  271 (440)
                      |+|+|++++ ++++ ..  ..  .+||+++........+.+....     .+.+. ...+..+.+........+|++|+.
T Consensus       166 fsl~l~~dGnlvLy-~~--~~--~~yW~Sgt~~~~~~~l~l~~dG-----nLvl~-d~~~~~vWsS~t~~~~~~rl~Ld~  234 (276)
T 3m7h_A          166 SKLVFQGDGNLVAY-GP--NG--AATWNAGTQGKGAVRAVFQGDG-----NLVVY-GAGNAVLWHSHTGGHASAVLRLQA  234 (276)
T ss_dssp             EEEEECTTSCEEEE-CT--TS--SEEEECCCTTTTCCEEEECTTS-----CEEEE-CTTSCEEEECSCTTCTTCEEEECT
T ss_pred             EEEeecCCceEEEE-eC--CC--eEEEECCCCCCccEEEEEcCCC-----eEEEE-eCCCcEEEEecCCCCCCEEEEEcC
Confidence            999999887 4443 22  12  5899986321111222332211     12221 122223333322222236999999


Q ss_pred             CCcEEEEEe
Q 041743          272 DGNLRVFTY  280 (440)
Q Consensus       272 dG~lr~y~~  280 (440)
                      ||+||+|.|
T Consensus       235 dGnLvly~~  243 (276)
T 3m7h_A          235 NGSIAILDE  243 (276)
T ss_dssp             TSCEEEEEE
T ss_pred             CccEEEEcC
Confidence            999999987



>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M* Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii} Back     alignment and structure
>3hms_A Hepatocyte growth factor; HGF/SF, hormone/growth factor, disulfide bond, glycoprotein, kringle, pyrrolidone carboxylic acid, serine protea homolog; 1.70A {Homo sapiens} SCOP: g.10.1.1 PDB: 3hmt_A 2hgf_A 3hmr_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 440
d1dlpa2120 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet 9e-12
d1kj1a_109 b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium 3e-11
d1kj1a_109 b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium 2e-06
d1dlpa1115 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p 1e-09
d1dlpa1115 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p 0.001
d1xd5a_112 b.78.1.1 (A:) Gastrodianin (antifungal protein) {G 5e-09
d1b2pa_119 b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill 4e-07
d1b2pa_119 b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill 1e-04
d1jpca_108 b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan 6e-04
d1jpca_108 b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan 0.002
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 Back     information, alignment and structure

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]
 Score = 59.6 bits (144), Expect = 9e-12
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 3/84 (3%)

Query: 90  VWEANRGKPVREN-AVFSLGTDGNLVLAEADGTVVWQSNTANKGVLGFGLFPNGNMVLHD 148
               +  + ++ +    S+ TD NLVL + D  V   +           L PNG M +  
Sbjct: 23  PQTLHATQSLQLSPYRLSMETDCNLVLFDRDDRVWSTNTAGKGTGCRAVLQPNGRMDVLT 82

Query: 149 SKGNFIWQIFD--YPTDTLLVGQS 170
           ++   +W   +       + V Q 
Sbjct: 83  NQNIAVWTSGNSRSAGRYVFVLQP 106


>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query440
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 99.76
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 99.74
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 99.69
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 99.65
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 99.61
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 99.47
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 99.18
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 99.13
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 99.09
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 99.03
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 99.0
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 98.87
d2qj2a191 Hepatocyte growth factor {Human (Homo sapiens) [Ta 88.09
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]
Probab=99.76  E-value=1.8e-18  Score=144.56  Aligned_cols=99  Identities=24%  Similarity=0.349  Sum_probs=78.1

Q ss_pred             ceeEeecCCcEEEEEEeCCCCCeEEEEEEeeecCCCceeEEEeecCCCCcccCceEEEcCCccEEEEeCCCcEEEEecCC
Q 041743           50 YRMSGIYNDPFQLGFYNTTPNAFTLALRLGIKKQEPVFRWVWEANRGKPVRENAVFSLGTDGNLVLAEADGTVVWQSNTA  129 (440)
Q Consensus        50 ~~~l~s~~g~F~lGF~~~~~~~f~l~Iw~~~~~~~~~~t~VW~ANr~~pv~~~~~l~l~~~G~Lvl~~~~~~~vWss~~~  129 (440)
                      ++.|+  +|.|+|+|+..  ++  |.|+..       .++||.||++.|.. .+.|.|+.||+|||+|. +.++|++++.
T Consensus        13 g~~l~--~g~~~l~~q~D--GN--Lvly~~-------~~~vW~s~~~~~~~-~~~l~l~~dGnLvl~~~-~~~~w~s~t~   77 (112)
T d1xd5a_          13 GGSLA--EGGYLFIIQND--CN--LVLYDN-------NRAVWASGTNGKAS-GCVLKMQNDGNLVIYSG-SRAIWASNTN   77 (112)
T ss_dssp             TCEEE--ETTEEEEECTT--SC--EEEEET-------TEEEEECCCTTSCS-SEEEEECTTSCEEEEET-TEEEEECCCC
T ss_pred             CCEEE--ECCEEEEEcCC--CC--EEEEcC-------CcEEEEccCccCCC-CcEEEEeccccEEEEec-CCeEEEEeec
Confidence            34454  48899999863  33  455542       26899999998743 47899999999999996 5678877765


Q ss_pred             CC-ceeEEEEeeCCCeeEeccCCeeEEeeecCCCc
Q 041743          130 NK-GVLGFGLFPNGNMVLHDSKGNFIWQIFDYPTD  163 (440)
Q Consensus       130 ~~-~~~~~~Lld~GNlVl~~~~~~~~WqSFD~PTD  163 (440)
                      .. +...|+|+|+|||||++.+++++|||+.+|++
T Consensus        78 ~~~~~~~l~L~ddGNlvly~~~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          78 RQNGNYYLILQRDRNVVIYDNSNNAIWATHTNVGN  112 (112)
T ss_dssp             CSCCCCEEEECTTSCEEEECTTSCEEEECCCCCCC
T ss_pred             cCCCceEEEEcCCCCEEEECCCCcEEecCCCccCC
Confidence            43 45679999999999999999999999999985



>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
>d2qj2a1 g.10.1.1 (A:36-126) Hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure