Citrus Sinensis ID: 041810

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750

PRTSVSSSIGDSAELEGNLTLSDRLKAFKSSQFDPDAYVASKSQHMNEKEIRHLCSYLVELKKASAEEMRRCVYANYAAFIRTSKEISVLEGQLLSMRNLLATQSALVQGLAEGARIDSLFAVTEDSDDDDISSLKNEGLSNMENWSVEFLETLEVLLAERRVDEALAALEEGQNTVREAKHRCTLSRSAIFSLQSAISEQRQKLADQLAGTICQPSTRGVELRSAVLALKKLGDGPRSHTLLLKSHHQRLQSYVQSLRSSSSLSGGALTATVSQLVFSTIAQAARDSLAVFGEEPAYSSELVTWAVKETEDFALLLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSFRPSVEHALSAYLKRIEKSSAALAAADDWLLAYPPAGARPFSSTNSLNTAVGSQPKLSTSAHKFNALVQELLEDIGPLENLKLDGPALDGVFQAFNSYVSLLINALPGSTENEENLEGFSNKIVSMAETESQQVALLANASLLADELLPRAALKLLPLSSNRMEMTPRRASDRQNRFPEQREWKRKLQRLVDRLRDSFCRTHALDIIFTEDGEIRLNAEIYTCMDESMEEPEWFPSPIFQELFIKLTRMASIASDMFVGRERFATILLMRLTETVILWLADDQSFWAEIEEGPKPLGPLGLQQFYLDMEFVMLFSSQGRYLSRNLQQVIKNIIARAIEVVAATGIDPYSVLPEDDWFAEIAQIAIKMLSGKATFGDDEEDVLSPTASV

cccccccccccccccccccccHHHHHHcccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccc

ccccccccccccccccccccHHHHccHcccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHcccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEccccccccccHEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccccccccHHHHHHEHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccc

prtsvsssigdsaelegnLTLSDRLKAfkssqfdpdayvasksqHMNEKEIRHLCSYLVELKKASAEEMRRCVYANYAAFIRTSKEISVLEGQLLSMRNLLATQSALVQGLAEGARIDSLfavtedsddddisslkneglsnmenWSVEFLETLEVLLAERRVDEALAALEEGQNTVREAKHRCTLSRSAIFSLQSAISEQRQKLADQLAgticqpstrgVELRSAVLALKklgdgprshtLLLKSHHQRLQSYVQSLrsssslsggalTATVSQLVFSTIAQAARDSLavfgeepaysseLVTWAVKETEDFALLLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSFRPSVEHALSAYLKRIEKSSAALAAADDWllayppagarpfsstnslntavgsqpklstsAHKFNALVQELLEdigplenlkldgpaldGVFQAFNSYVSLLINalpgsteneenleGFSNKIVSMAETESQQVALLANASLLADELLPRAALkllplssnrmemtprrasdrqnrfpeQREWKRKLQRLVDRLRDSFCRTHALDIIFTEDGEIRLNAEIYTcmdesmeepewfpspifQELFIKLTRMASIASDMFVGRERFATILLMRLTETVILWLADDQSFWAEieegpkplgplglqqFYLDMEFVMLFSSQGRYLSRNLQQVIKNIIARAIEVVAatgidpysvlpeddwFAEIAQIAIKMLsgkatfgddeedvlsptasv

prtsvsssigdsaelegNLTLSDRLKAFKSSQFDPDAYVASKSQHMNEKEIRHLCSYLVELKKASAEEMRRCVYANYAAFIRTSKEISVLEGQLLSMRNLLATQSALVQGLAEGARIDSLFAVTEDSDDDDISSLKneglsnmenWSVEFLETLEVLLAERRVDEALAALEEGQNTVREAKHRCTLSRSAIFSLQSAISEQRQKLADQLAGticqpstrgVELRSAVLALKKLGDGPRSHTLLLKSHHQRLQSYVQSLRSSSSLSGGALTATVSQLVFSTIAQAARDSLAVFGEEPAYSSELVTWAVKETEDFALLLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSFRPSVEHALSAYLKRIEKSSAALAAADDWLLAYPPAGARPFSSTNSLNTAVGSQPKLSTSAHKFNALVQELLEDIGPLENLKLDGPALDGVFQAFNSYVSLLINALPGSTENEENLEGFSNKIVSMAETESQQVALLANASLLADELLPRAALkllplssnrmemtprrasdrqnrfpeqrewkRKLQRLVDRLRdsfcrthaldiiftedgeiRLNAEIYTCMDESMEEPEWFPSPIFQELFIKLTRMASIASDMFVGRERFATILLMRLTETVILWLADDQSFWAEIEEGPKPLGPLGLQQFYLDMEFVMLFSSQGRYLSRNLQQVIKNIIARAIEVVAATGIDPYSVLPEDDWFAEIAQIAIKMLSGkatfgddeedvlsptasv

PRTSVSSSIGDSAELEGNLTLSDRLKAFKSSQFDPDAYVASKSQHMNEKEIRHLCSYLVELKKASAEEMRRCVYANYAAFIRTSKEISVLEGQLLSMRNLLATQSALVQGLAEGARIDSLFAVTEDSDDDDISSLKNEGLSNMENWSVEFLETLEVLLAERRVDEALAALEEGQNTVREAKHRCTLSRSAIFSLQSAISEQRQKLADQLAGTICQPSTRGVELRSAVLALKKLGDGPRSHTLLLKSHHqrlqsyvqslrsssslsGGALTATVSQLVFSTIAQAARDSLAVFGEEPAYSSELVTWAVKETEDFALLLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSFRPSVEHALSAYLKRIEKSSaalaaaddwllaYPPAGARPFSSTNSLNTAVGSQPKLSTSAHKFNALVQELLEDIGPLENLKLDGPALDGVFQAFNSYVSLLINALPGSTENEENLEGFSNKIVSMAETESQQVALLANASLLADEllpraalkllplSSNRMEMTPRRASDRQNRFPEQREWKRKLQRLVDRLRDSFCRTHALDIIFTEDGEIRLNAEIYTCMDESMEEPEWFPSPIFQELFIKLTRMASIASDMFVGRERFATILLMRLTETVILWLADDQSFWAEIEEGPKPLGPLGLQQFYLDMEFVMLFSSQGRYLSRNLQQVIKNIIARAIEVVAATGIDPYSVLPEDDWFAEIAQIAIKMLSGKATFGDDEEDVLSPTASV

*************************************************EIRHLCSYLVELKKASAEEMRRCVYANYAAFIRTSKEISVLEGQLLSMRNLLATQSALVQGLAEGARIDSLFAVT******************MENWSVEFLETLEVLLAERRVDEALAALEE****V**AKHRCTLSRSAIFSLQ***********DQLAGTICQPSTRGVELRSAVLALKKL********LL************************ALTATVSQLVFSTIAQAARDSLAVFGEEPAYSSELVTWAVKETEDFALLLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSFRPSVEHALSAYLKRIEKSSAALAAADDWLLAYPP***************************KFNALVQELLEDIGPLENLKLDGPALDGVFQAFNSYVSLLINALP**************************VALLANASLLADELLPRAALKL******************************KLQRLVDRLRDSFCRTHALDIIFTEDGEIRLNAEIYTCMDESMEEPEWFPSPIFQELFIKLTRMASIASDMFVGRERFATILLMRLTETVILWLADDQSFWAEIEEGPKPLGPLGLQQFYLDMEFVMLFSSQGRYLSRNLQQVIKNIIARAIEVVAATGIDPYSVLPEDDWFAEIAQIAIKMLSGKA****************

**************************AFKSSQFDPDAYVA***************SYLVELKKASAEEMRRCVYANYAAFIRTSKE********************************************************MENWSVEFLETLEVLLAERRVDEALAALEEGQNT*************AIFSLQSAISEQRQKLADQ*******************LALKKLGDGPRSHTLLLKSHHQRLQSYVQSLRSSSSLSGGALTATVSQLVFSTIAQAARDSLAVFGEEPAYSSELVTWAVKETEDFALLLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSFRPSVEHALSAYLKRIEKSSAALAAADDWL***********************QPKLSTSAHKFNALVQELLEDIGPLENLKLDGPALDGVFQAFNSYVSLLINA****************KIVSMAETESQQVALLANASLLADELLPRAAL*****************************WKRKLQRLVDRLRDSFCRTHALDIIFTEDGEIRLNAEIYTCMDESMEEPEWFPSPIFQELFIKLTRMASIASDMFVGRERFATILLMRLTETVILWLADDQSFWAEIEEGPKPLGPLGLQQFYLDMEFVMLFSSQGRYLSRNLQQVIKNIIARAIEVVAATGIDPYSVLPEDDWFAEIAQIAIK**********************

***********SAELEGNLTLSDRLKAFKSSQFDPDAYVASKSQHMNEKEIRHLCSYLVELKKASAEEMRRCVYANYAAFIRTSKEISVLEGQLLSMRNLLATQSALVQGLAEGARIDSLFAVT********SSLKNEGLSNMENWSVEFLETLEVLLAERRVDEALAALEEGQNTVREAKHRCTLSRSAIFSLQSAISEQRQKLADQLAGTICQPSTRGVELRSAVLALKKLGDGPRSHTLLLKSH*********************LTATVSQLVFSTIAQAARDSLAVFGEEPAYSSELVTWAVKETEDFALLLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSFRPSVEHALSAYLKRIEKSSAALAAADDWLLAYPPAGARPFSSTNSLNTAVGSQPKLSTSAHKFNALVQELLEDIGPLENLKLDGPALDGVFQAFNSYVSLLINALPGSTENEENLEGFSNKIVSMAETESQQVALLANASLLADELLPRAALKLLPLSSNRME****************REWKRKLQRLVDRLRDSFCRTHALDIIFTEDGEIRLNAEIYTCMDESMEEPEWFPSPIFQELFIKLTRMASIASDMFVGRERFATILLMRLTETVILWLADDQSFWAEIEEGPKPLGPLGLQQFYLDMEFVMLFSSQGRYLSRNLQQVIKNIIARAIEVVAATGIDPYSVLPEDDWFAEIAQIAIKMLSGKATFGDD***********

******************LTLSDRLKAFKSSQFDPDAYVASKSQHMNEKEIRHLCSYLVELKKASAEEMRRCVYANYAAFIRTSKEISVLEGQLLSMRNLLATQSALVQGLAEGARID******************NEGLSNMENWSVEFLETLEVLLAERRVDEALAALEEGQNTVREAKHRCTLSRSAIFSLQSAISEQRQKLADQLAGTICQPSTRGVELRSAVLALKKLGDGPRSHTLLLKSHHQRLQSYVQSLRSSSSLSGGALTATVSQLVFSTIAQAARDSLAVFGEEPAYSSELVTWAVKETEDFALLLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSFRPSVEHALSAYLKRIEKSSAALAAADDWLLAYPPA***************GSQPKLSTSAHKFNALVQELLEDIGPLENLKLDGPALDGVFQAFNSYVSLLINALPGSTENEENLEGFSNKIVSMAETESQQVALLANASLLADELLPRAALKLLPLS****************RFPEQREWKRKLQRLVDRLRDSFCRTHALDIIFTEDGEIRLNAEIYTCMDESMEEPEWFPSPIFQELFIKLTRMASIASDMFVGRERFATILLMRLTETVILWLADDQSFWAEIEEGPKPLGPLGLQQFYLDMEFVMLFSSQGRYLSRNLQQVIKNIIARAIEVVAATGIDPYSVLPEDDWFAEIAQIAIKMLSG******************

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PRTSVSSSIGDSAELEGNLTLSDRLKAFKSSQFDPDAYVASKSQHMNEKEIRHLCSYLVELKKASAEEMRRCVYANYAAFIRTSKEISVLEGQLLSMRNLLATQSALVQGLAEGARIDSLFAVTEDSDDDDISSLKNEGLSNMENWSVEFLETLEVLLAERRxxxxxxxxxxxxxxxxxxxxxCTLSRSAIFSLQSAISEQRQKLADQLAGTICQPSTRGVELRSAVLALKKLGDGPRSHTLLLKSHHQRLQSYVQSLRSSSSLSGGALTATVSQLVFSTIAQAARDSLAVFGEEPAYSSELVTWAVKETEDFALLLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSFRPSVEHALSAYLKRIEKSSAALAAADDWLLAYPPAGARPFSSTNSLNTAVGSQPKLSTSAHKFNALVQELLEDIGPLENLKLDGPALDGVFQAFNSYVSLLINALPGSTENEENLEGFSNKIVSMAETESQQVALLANASLLADELLPRAALKLLPLSSNRMEMTPRRASDRQNRFPEQREWKRKLQRLVDRLRDSFCRTHALDIIFTEDGEIRLNAEIYTCMDESMEEPEWFPSPIFQELFIKLTRMASIASDMFVGRERFATILLMRLTETVILWLADDQSFWAEIEEGPKPLGPLGLQQFYLDMEFVMLFSSQGRYLSRNLQQVIKNIIARAIEVVAATGIDPYSVLPEDDWFAEIAQIAIKMLSGKATFGDDEEDVLSPTASV

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		750	2.2.26 [Sep-21-2011]
Q54VZ8		815	Exocyst complex component	yes	no	0.461	0.424	0.204	3e-13
P0CN62		675	Exocyst complex component	yes	no	0.14	0.155	0.323	4e-06
P0CN63		675	Exocyst complex component	N/A	no	0.14	0.155	0.323	4e-06
Q7S8B6		683	Exocyst complex component	N/A	no	0.102	0.112	0.337	1e-05
Q5U247		685	Exocyst complex component	N/A	no	0.132	0.144	0.27	6e-05
Q5BFX0		666	Exocyst complex component	yes	no	0.168	0.189	0.274	0.0003
A4IF89		725	Exocyst complex component	yes	no	0.34	0.351	0.214	0.0004

>sp\|Q54VZ8\|EXOC8_DICDI Exocyst complex component 8 OS=Dictyostelium discoideum GN=exoc8 PE=3 SV=2	Back alignment and function desciption

 Score = 77.8 bits (190), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/377 (20%), Positives = 157/377 (41%), Gaps = 31/377 (8%)

Query: 24  RLKAFKSSQFDPDAYVASKSQHMNEKEIRHLCSYLVELKKASAEEMRRCVYANYAAFIRT 83
           + + F SS F+ + YV     H  +++      YL   K    + +++ VY N+  FI  
Sbjct: 106 QYETFLSSNFNSEKYVNDLFTHKTDQQATVHLQYLENRKLGCIDHLKKDVYKNHLIFIGA 165

Query: 84  SKEISVLEGQLLSMRNLLATQSALVQGLAEGARIDSLFAVTEDSDDDDISSLKNEGLSNM 143
           SKEI+  E  +L  RNL++    ++  L          +++ D        +K  G  + 
Sbjct: 166 SKEIANSEVDMLDFRNLISDYGNVMSSLQN-------ISISWDH-----YKVKKSGKIDF 213

Query: 144 ENWS-----VEFLETLEVLLA---ERRVDEALAALEEGQNTVREAKHRCTLSRSAIFSLQ 195
           E  S     +++L T    L+   E+R  E    L E  N + E+  +  +       L+
Sbjct: 214 EPLSPATEPIQWLTTAPNELSVSIEQREFEVAVGLVEKINKIYESNPKVEIVMQT-HPLK 272

Query: 196 SAISEQRQKLADQLAGTICQPSTRGVELRSAVLALKKLGDGPRSHTLLLKSHHQRLQSYV 255
             I  + + L D+L   +  P  +  +++  +  L +L    ++ ++ L+S    +   +
Sbjct: 273 DQIENKVKILTDKLMNELRSPLLKANQIKDTISLLVRLSQNDKAKSIFLESRSHSINQAI 332

Query: 256 QSLRSSSSLSGGALTATVSQLVFSTIAQAARDSLAVFGEEPAY-SSELVTWAVKETEDFA 314
           + +  S  L        +++++F++I     D    F   P+Y +S LV+W ++E    +
Sbjct: 333 KKIVFSGDL--NRFIGELARVIFNSINSTCNDFTNSF---PSYMNSGLVSWIIEELVLIS 387

Query: 315 LLLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSFRPSVEHALSAY 374
            +  R +            +++ I+I   HC +++  GL++        +P VE  +  Y
Sbjct: 388 DIFNRQVF----ILDNFYSISQAIRIIESHCEMMDQTGLSIGFYWNLLLQPHVEQLIVNY 443

Query: 375 LKRIEKSSAALAAADDW 391
             +I  S       + W
Sbjct: 444 EIKIRDSMLHQLMDEKW 460

Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
Dictyostelium discoideum (taxid: 44689)

>sp\|P0CN62\|EXO84_CRYNJ Exocyst complex component EXO84 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=EXO84 PE=3 SV=1	Back alignment and function description

>sp\|P0CN63\|EXO84_CRYNB Exocyst complex component EXO84 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=EXO84 PE=3 SV=1	Back alignment and function description

>sp\|Q7S8B6\|EXO84_NEUCR Exocyst complex component EXO84 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=exo-84 PE=3 SV=2	Back alignment and function description

>sp\|Q5U247\|EXOC8_XENLA Exocyst complex component 8 OS=Xenopus laevis GN=exoc8 PE=2 SV=1	Back alignment and function description

>sp\|Q5BFX0\|EXO84_EMENI Exocyst complex component exo84 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=exo84 PE=3 SV=1	Back alignment and function description

>sp\|A4IF89\|EXOC8_BOVIN Exocyst complex component 8 OS=Bos taurus GN=EXOC8 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		750
224139950		765	predicted protein [Populus trichocarpa]	0.990	0.971	0.729	0.0
255558290		774	protein with unknown function [Ricinus c	0.969	0.939	0.740	0.0
18391151		754	Vps51/Vps67 family (components of vesicu	0.982	0.977	0.698	0.0
297843846		754	hypothetical protein ARALYDRAFT_312077 [	0.982	0.977	0.694	0.0
225424843		766	PREDICTED: uncharacterized protein LOC10	0.986	0.966	0.680	0.0
4914342		824	F14N23.28 [Arabidopsis thaliana]	0.982	0.894	0.684	0.0
147777922		766	hypothetical protein VITISV_023072 [Viti	0.986	0.966	0.679	0.0
449458121		772	PREDICTED: uncharacterized protein LOC10	0.985	0.957	0.668	0.0
449505703		772	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.985	0.957	0.667	0.0
356501946		750	PREDICTED: exocyst complex component 8-l	0.978	0.978	0.660	0.0

>gi\|224139950\|ref\|XP_002323355.1\| predicted protein [Populus trichocarpa] gi\|222867985\|gb\|EEF05116.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1069 bits (2765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/744 (72%), Positives = 641/744 (86%), Gaps = 1/744 (0%)

Query: 4   SVSSSIGDSAELEGNLTLSDRLKAFKSSQFDPDAYVASKSQHMNEKEIRHLCSYLVELKK 63
           S +SSIGDSAELE NLTLSDRLK FK+S FDP+A+V SK Q MNEKEIRHLCSYLV+LK+
Sbjct: 2   SRTSSIGDSAELERNLTLSDRLKVFKNSHFDPNAFVTSKCQTMNEKEIRHLCSYLVDLKR 61

Query: 64  ASAEEMRRCVYANYAAFIRTSKEISVLEGQLLSMRNLLATQSALVQGLAEGARIDSLFAV 123
           ASAEEMR+ VYANYAAFIRTS+EIS LEGQL+SMRN L+TQ+ALV GL+E ARIDSL+A 
Sbjct: 62  ASAEEMRKSVYANYAAFIRTSREISDLEGQLISMRNFLSTQAALVHGLSEHARIDSLWAA 121

Query: 124 TEDSDDDDISSLKNEGLSNMENWSVEFLETLEVLLAERRVDEALAALEEGQNTVREAKHR 183
           +EDS  DD+S+  +  LS  E+W +EFL+T EVLLAERRVDEA+ ALE+G+    E++ +
Sbjct: 122 SEDSIADDLSNFDDGELSESEDWLIEFLDTFEVLLAERRVDEAMQALEKGEGLANESRKK 181

Query: 184 CTLSRSAIFSLQSAISEQRQKLADQLAGTICQPSTRGVELRSAVLALKKLGDGPRSHTLL 243
            +LS +A+ +L++AI +QRQKLA QLA TI QPSTRG ELRSAVLALK LGD PR+HTLL
Sbjct: 182 HSLSPTALITLETAIRDQRQKLAYQLADTISQPSTRGQELRSAVLALKNLGDAPRAHTLL 241

Query: 244 LKSHHQRLQSYVQSLRSSSSLSGGALTATVSQLVFSTIAQAARDSLAVFGEEPAYSSELV 303
           L SHHQ+L+S + SLRSS++  G A T  +SQ+VFSTIAQAA DSLAV+GEEPAY+SELV
Sbjct: 242 LNSHHQKLKSSLPSLRSSNNSCGRAYTVALSQVVFSTIAQAASDSLAVYGEEPAYTSELV 301

Query: 304 TWAVKETEDFALLLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSF 363
           TWAVKETE FA LL+RH+LAS+AA+GGLRV  E I ICLGHCSLLEARGL+L+ V+LR F
Sbjct: 302 TWAVKETEAFAFLLKRHVLASSAASGGLRVAAECIHICLGHCSLLEARGLSLATVLLRLF 361

Query: 364 RPSVEHALSAYLKRIEKSSAALAAADDWLLAYPPAGARPFSSTNSLNTAVGSQPKLSTSA 423
           +P +E AL+A LK+I+  SAALAAADDWLL YPPAG RPFSS+ SL +A+ SQPKLS+SA
Sbjct: 362 KPIIEQALNANLKKIQDISAALAAADDWLLTYPPAGGRPFSSSASLGSAMASQPKLSSSA 421

Query: 424 HKFNALVQELLEDIGPLENLKLDGPALDGVFQAFNSYVSLLINALPGSTENEENLEGFSN 483
           ++FN+++Q+ LED GPLE+L+LDG AL GV Q FNSYV+LL+ ALP S E EE+LEG  +
Sbjct: 422 NRFNSMIQDFLEDAGPLESLQLDGSALGGVLQVFNSYVNLLMRALPSSAETEESLEGSGS 481

Query: 484 KIVSMAETESQQVALLANASLLADELLPRAALKLLPLSSNRMEMTPRRASDRQNRFPEQR 543
           KIV +AETESQQ+ALLANASLLADELLP AA+KLLPL   RM+  P+R+S+RQ+R PEQR
Sbjct: 482 KIVRIAETESQQLALLANASLLADELLPYAAMKLLPLPP-RMDEQPKRSSERQSRLPEQR 540

Query: 544 EWKRKLQRLVDRLRDSFCRTHALDIIFTEDGEIRLNAEIYTCMDESMEEPEWFPSPIFQE 603
           EWK+KLQR VDRLRDSFCR HALD+IFTEDG+  LNA IYT +D+++EEPEWFPS IFQE
Sbjct: 541 EWKKKLQRSVDRLRDSFCRQHALDLIFTEDGDTHLNAYIYTSLDDNVEEPEWFPSLIFQE 600

Query: 604 LFIKLTRMASIASDMFVGRERFATILLMRLTETVILWLADDQSFWAEIEEGPKPLGPLGL 663
           LF+KLTRMASIA+DMF+GRERFAT+LLMRLTETVILWL+DDQ+FW EIEEGPKPLGPLGL
Sbjct: 601 LFMKLTRMASIATDMFIGRERFATVLLMRLTETVILWLSDDQTFWEEIEEGPKPLGPLGL 660

Query: 664 QQFYLDMEFVMLFSSQGRYLSRNLQQVIKNIIARAIEVVAATGIDPYSVLPEDDWFAEIA 723
           QQ YLDMEFV+LFSSQGRYLSRNL QVIKNIIARAI+ VAATG+DPYS LPEDDWFAE+A
Sbjct: 661 QQLYLDMEFVLLFSSQGRYLSRNLHQVIKNIIARAIDAVAATGVDPYSTLPEDDWFAEVA 720

Query: 724 QIAIKMLSGKATFGDDEEDVLSPT 747
           QIAIKML+GKA FG+ E DV SPT
Sbjct: 721 QIAIKMLTGKANFGNVERDVTSPT 744

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255558290\|ref\|XP_002520172.1\| protein with unknown function [Ricinus communis] gi\|223540664\|gb\|EEF42227.1\| protein with unknown function [Ricinus communis]	Back alignment and taxonomy information

>gi\|18391151\|ref\|NP_563869.1\| Vps51/Vps67 family (components of vesicular transport) protein [Arabidopsis thaliana] gi\|332190452\|gb\|AEE28573.1\| Vps51/Vps67 family (components of vesicular transport) protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297843846\|ref\|XP_002889804.1\| hypothetical protein ARALYDRAFT_312077 [Arabidopsis lyrata subsp. lyrata] gi\|297335646\|gb\|EFH66063.1\| hypothetical protein ARALYDRAFT_312077 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|225424843\|ref\|XP_002268561.1\| PREDICTED: uncharacterized protein LOC100265642 [Vitis vinifera] gi\|296086460\|emb\|CBI32049.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|4914342\|gb\|AAD32890.1\|AC005489_28 F14N23.28 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|147777922\|emb\|CAN69091.1\| hypothetical protein VITISV_023072 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449458121\|ref\|XP_004146796.1\| PREDICTED: uncharacterized protein LOC101219344 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449505703\|ref\|XP_004162545.1\| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101227901 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356501946\|ref\|XP_003519784.1\| PREDICTED: exocyst complex component 8-like [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		750
TAIR\|locus:505006115		754	AT1G10385 "AT1G10385" [Arabido	0.982	0.977	0.671	1e-251
TAIR\|locus:2155441		814	EXO84B "exocyst complex compon	0.92	0.847	0.585	2.4e-212
TAIR\|locus:2012768		769	AT1G10180 "AT1G10180" [Arabido	0.916	0.893	0.335	3.1e-90
DICTYBASE\|DDB_G0279991		815	exoc8 "exocyst complex subunit	0.454	0.418	0.203	9e-12
ZFIN\|ZDB-GENE-070410-60		684	exoc8 "exocyst complex compone	0.121	0.133	0.301	1.1e-10
UNIPROTKB\|Q5ZJ43		708	EXOC8 "Exocyst complex compone	0.314	0.333	0.221	6.3e-10
UNIPROTKB\|F1NE80		709	EXOC8 "Exocyst complex compone	0.314	0.332	0.221	6.3e-10
UNIPROTKB\|A4IF89		725	EXOC8 "Exocyst complex compone	0.12	0.124	0.282	8.7e-10
MGI\|MGI:2142527		716	Exoc8 "exocyst complex compone	0.12	0.125	0.282	2.2e-09
UNIPROTKB\|E2R5F1		727	EXOC8 "Uncharacterized protein	0.12	0.123	0.282	1.2e-08

TAIR\|locus:505006115 AT1G10385 "AT1G10385" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2424 (858.3 bits), Expect = 1.0e-251, P = 1.0e-251
 Identities = 505/752 (67%), Positives = 579/752 (76%)

Query:     2 RTSVSSSIGDSAELEGNLTLSDRLKAFKSSQFDPDAYVASKSQHMNEKEIRHLCSYLVEL 61
             R S+SSSIG+SAELEGNLTLSDRLK FK S FDPDAYV SK Q MNEKE RHL SYLVEL
Sbjct:     6 RGSMSSSIGNSAELEGNLTLSDRLKVFKGSTFDPDAYVTSKCQRMNEKETRHLSSYLVEL 65

Query:    62 KKASAEEMRRCVYANYAAFIRTSKEISVLEGQLLSMRNLLATQSALVQGLAEGARIDSLF 121
             KKASAEEMR+ VYANYAAFIRTSKEIS LEGQLLSMRNLL+ Q+ALV GLA+G  I SL 
Sbjct:    66 KKASAEEMRKSVYANYAAFIRTSKEISALEGQLLSMRNLLSAQAALVHGLADGVHISSLC 125

Query:   122 AV-TEDSDDDDISSLKNEGLSNMENWSVEFLETLEVLLAERRVDEALAALEEGQNTVREA 180
             A   +D  D+D+  + N+ LSN+ENW VEF + LEVLLAE+RV+E++AALEEG+    EA
Sbjct:   126 ADDADDLRDEDLYDMDNKQLSNIENWVVEFFDRLEVLLAEKRVEESMAALEEGRRVAVEA 185

Query:   181 KHRCTLSRSAIFSLQSAISEQRQKLADQLAGTICQPSTRGVELRSAVLALKKLGDGPRSH 240
               + TLS + + SL +AI E+RQ+LADQLA  I QPSTRG ELRSAVL+LKKLGDG R+H
Sbjct:   186 HEKRTLSPTTLLSLNNAIKEKRQELADQLAEAISQPSTRGGELRSAVLSLKKLGDGSRAH 245

Query:   241 TLLLKSHHXXXXXXXXXXXXXXXXXGGALTATVSQLVFSTIAQAARDSLAVFGEEPAYSS 300
             TLLL+S+                  G A  A +SQLVFSTIAQAA DS AV GE+PAY+S
Sbjct:   246 TLLLRSYERRLQANIQSLRASNTSYGVAFAAALSQLVFSTIAQAASDSQAVVGEDPAYTS 305

Query:   301 ELVTWAVKETEDFALLLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVIL 360
             ELVTWAVK+ E FALLL+RH LAS+AAAG LRV  E +Q+C  HCS LE+RGLALSPV+L
Sbjct:   306 ELVTWAVKQAESFALLLKRHTLASSAAAGSLRVTAECVQLCASHCSSLESRGLALSPVLL 365

Query:   361 RSFRPSVEHALSAYLKRIEKSSXXXXXXXXXXXXYPPAGARPFSSTNSLNTAVGSQPKLS 420
             + FRP VE AL+  LKRIE+SS            Y P G+R  SST    T      KLS
Sbjct:   366 KHFRPGVEQALTGNLKRIEQSSAALAASDDWSLSYTPTGSRA-SST----TPTAPHLKLS 420

Query:   421 TSAHKFNALVQELLEDIGPL-ENLKLDGPALDGVFQAFNSYVSLLINALPGSTENEENLE 479
              SA +FN++VQE LED GPL E L+LDG ALDGV Q FNSYV LLINALPGS ENEEN  
Sbjct:   421 ISAQRFNSMVQEFLEDAGPLDEALQLDGIALDGVLQVFNSYVDLLINALPGSAENEENPV 480

Query:   480 GFSNKIVSMAETESQQVALLANASLLADEXXXXXXXXXXXXSSNRMEMTPRR-ASDRQNR 538
                ++IV +AETESQQ ALL NA LLADE             ++  + TPRR +SDRQNR
Sbjct:   481 ---HRIVKVAETESQQTALLVNALLLADELIPRSASRILPQGTS--QSTPRRGSSDRQNR 535

Query:   539 FPEQREWKRKLQRLVDRLRDSFCRTHALDIIFTEDGEIRLNAEIYTCMDESMEEPEWFPS 598
              PEQREWK+KLQR VDRLRDSFCR HAL++IFTE+GE+RL++EIY  MDE+ EEPEWFPS
Sbjct:   536 -PEQREWKKKLQRSVDRLRDSFCRQHALELIFTEEGEVRLSSEIYILMDETTEEPEWFPS 594

Query:   599 PIFQELFIKLTRMASIASDMFVGRERFATILLMRLTETVILWLADDQSFWAEIEEGPKPL 658
             PIFQELF KLTR+A I SDMFVGRERFATILLMRLTETVILW++DDQSFW E+E G KPL
Sbjct:   595 PIFQELFAKLTRIAMIVSDMFVGRERFATILLMRLTETVILWISDDQSFWEEMETGDKPL 654

Query:   659 GPLGLQQFYLDMEFVMLFSSQGRYLSRNLQQVIKNIIARAIEVVAATGIDPYSVLPEDDW 718
             GPLGLQQFYLDMEFVM+F+SQGRYLSRNL QVIKNIIARA+E V+ATG+DPYS LPE++W
Sbjct:   655 GPLGLQQFYLDMEFVMIFASQGRYLSRNLHQVIKNIIARAVEAVSATGLDPYSTLPEEEW 714

Query:   719 FAEIAQIAIKMLSGKATFGDD-EEDVLSPTAS 749
             FAE+AQIAIKML GK  FG   E DV SP+ S
Sbjct:   715 FAEVAQIAIKMLMGKGNFGGHGERDVTSPSVS 746

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR\|locus:2155441 EXO84B "exocyst complex component 84B" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2012768 AT1G10180 "AT1G10180" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0279991 exoc8 "exocyst complex subunit 8" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-070410-60 exoc8 "exocyst complex component 8" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5ZJ43 EXOC8 "Exocyst complex component 8" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NE80 EXOC8 "Exocyst complex component 8" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|A4IF89 EXOC8 "Exocyst complex component 8" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

MGI\|MGI:2142527 Exoc8 "exocyst complex component 8" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|E2R5F1 EXOC8 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.XVI.2016.1	hypothetical protein (768 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		750
pfam08700		87	pfam08700, Vps51, Vps51/Vps67	4e-15

>gnl\|CDD\|219977 pfam08700, Vps51, Vps51/Vps67	Back alignment and domain information

 Score = 70.8 bits (174), Expect = 4e-15
 Identities = 21/87 (24%), Positives = 39/87 (44%)

Query: 28  FKSSQFDPDAYVASKSQHMNEKEIRHLCSYLVELKKASAEEMRRCVYANYAAFIRTSKEI 87
             S  FD D Y +        +E+R +   L    +   EE+R+ VY NY   I+ +  I
Sbjct: 1   LSSPSFDADRYFSELLSKATLEELRQIEKKLRAEIEELQEELRQLVYENYRDLIKAADTI 60

Query: 88  SVLEGQLLSMRNLLATQSALVQGLAEG 114
           S ++ ++ S+   L+     ++ L+  
Sbjct: 61  SKMKSEMESLSQKLSELKQALEKLSSK 87

This family includes a presumed domain found in a number of components of vesicular transport. The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved recycling of proteins from endosomes to the late Golgi. Vps51 (also known as Vps67) is a subunit of VFT and interacts with the SNARE Tlg1. Cog1_N is the N-terminus of the Cog1 subunit of the eight-unit Conserved Oligomeric Golgi (COG) complex that participates in retrograde vesicular transport and is required to maintain normal Golgi structure and function. The subunits are located in two lobes and Cog1 serves to bind the two lobes together probably via the highly conserved N-terminal domain of approximately 85 residues. Length = 87

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		750
KOG2215		673	consensus Exocyst complex subunit [Intracellular t	100.0
KOG2346		636	consensus Uncharacterized conserved protein [Funct	99.97
PF04124		338	Dor1: Dor1-like family ; InterPro: IPR007255 Dor1	99.84
KOG2215		673	consensus Exocyst complex subunit [Intracellular t	99.71
PF08700		87	Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te	99.69
KOG2069		581	consensus Golgi transport complex subunit [Intrace	99.67
PF15469		182	Sec5: Exocyst complex component Sec5	99.28
KOG2033		863	consensus Low density lipoprotein B-like protein [	99.0
KOG2347		934	consensus Sec5 subunit of exocyst complex [Intrace	98.98
PF06248		593	Zw10: Centromere/kinetochore Zw10; InterPro: IPR00	98.89
PF10191		766	COG7: Golgi complex component 7 (COG7); InterPro:	98.61
PF04100		383	Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007	98.58
PF10475		291	DUF2450: Protein of unknown function N-terminal do	98.53
PF06148		133	COG2: COG (conserved oligomeric Golgi) complex com	97.31
KOG2180		793	consensus Late Golgi protein sorting complex, subu	97.09
PF10392		132	COG5: Golgi transport complex subunit 5; InterPro:	96.99
PF04437		494	RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00	96.8
KOG2307		705	consensus Low density lipoprotein receptor [Intrac	96.48
KOG4182		828	consensus Uncharacterized conserved protein [Funct	95.46
KOG3691		982	consensus Exocyst complex subunit Sec8 [Intracellu	95.17
PF04048		142	Sec8_exocyst: Sec8 exocyst complex component speci	94.87
PF03081		371	Exo70: Exo70 exocyst complex subunit; InterPro: IP	87.61
PF04091		311	Sec15: Exocyst complex subunit Sec15-like ; InterP	80.72

>KOG2215 consensus Exocyst complex subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

Probab=100.00  E-value=9e-65  Score=576.06  Aligned_cols=663  Identities=29%  Similarity=0.360  Sum_probs=585.0

Q ss_pred             hhhhhccCCCCChhHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041810           23 DRLKAFKSSQFDPDAYVASKSQHMNEKEIRHLCSYLVELKKASAEEMRRCVYANYAAFIRTSKEISVLEGQLLSMRNLLA  102 (750)
Q Consensus        23 ~~~~~f~~~~Fdpe~Yv~~ll~~~~e~eL~~~~~~L~~lk~~t~sdLqknVY~NY~~FI~aSkEIs~LE~Em~~L~~lLs  102 (750)
                      .+...|..+.|+|+.|+++..+ ..+++++++|+++..+++++++.|+++||.||.+||++||||++||.||++|.|++.
T Consensus         4 ~~~s~f~~~~~t~~~~i~~~~~-~~e~dl~~~~~~~~~l~~as~e~~r~~~~~ny~~fI~~skEi~~le~el~~l~~~l~   82 (673)
T KOG2215|consen    4 DDDSSFEDEKITPSSYIPSKSK-KKESDLQQLCSELVALNKASAETLRQKVSMNYKAFIRTSKEISDLEMELYQLPKFLI   82 (673)
T ss_pred             CccccCcccccCccccccchhh-hhhhhHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHhcCcccccccchHHHhHHhhh
Confidence            4456789999999999999999 889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhhhhhhhh--hcCCcccccccccc-ccCccchhHHHHhHHHHHHHHhccCHHHHHHHHHHHHHHH--
Q 041810          103 TQSALVQGLAEGARIDSLFAV--TEDSDDDDISSLKN-EGLSNMENWSVEFLETLEVLLAERRVDEALAALEEGQNTV--  177 (750)
Q Consensus       103 ~q~~lI~~L~~~~~l~~L~e~--veg~~~e~l~~~~~-~~~~~~l~wL~elpdeLDv~IAer~feeAV~ll~k~~~~l--  177 (750)
                      +|.++++++.+++.. +..+.  .++.+.- +....+ +.+....+|+.++++.+|.+.+.+ .+.|...++-.+...  
T Consensus        83 ~Q~~~~~~l~~~~~~-d~~~~~s~~s~sn~-~~~~~~~~l~~~~~~~~~~fl~~l~~~~~~~-~dg~l~~~D~~~~~~~q  159 (673)
T KOG2215|consen   83 EQNNVIQSLLNGVLQ-DLSEDESLESLSNT-LLSLEDIHLGDVVKNLVKGFLKNLNTLLFES-VDGALEAFDFEKFLPSQ  159 (673)
T ss_pred             hccchHHHhhccccc-cccccccccccCCc-cccccCCchhHHHHHHHHHHHHhhhhhhhcc-chHHHhhcchhhhccch
Confidence            999999999998852 22221  2221111 111111 112245789999999999999999 888888776544311  


Q ss_pred             HhhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhcCCCcHHHHHHHHHhHHHHHHHhhh
Q 041810          178 REAKHRCTLSRSAIFSLQSAISEQRQKLADQLAGTICQPSTRGVELRSAVLALKKLGDGPRSHTLLLKSHHQRLQSYVQS  257 (750)
Q Consensus       178 ~~~~~~~~~~~~~~~~i~~ki~er~~~L~~~L~~~l~~~s~~~~elr~aV~lL~rLG~~~~A~~lFL~~rs~~L~~~lr~  257 (750)
                      ..+..  ..++ .....+..++.|...|++.+.+...++++...++..++-.|++||.++.++.+.++.+..++...+..
T Consensus       160 ~~~~~--~~~~-~L~~~~~~~~~r~~~l~d~~~~~a~~~~~~~~e~~~a~~~li~l~~~~~~~~i~~~~~~~~~~~~~ea  236 (673)
T KOG2215|consen  160 KTLKT--DFSH-DLNSVKITHDKRKESLTDLSLRLAAQINIKDEESWEAQLNLIRLGYSRMYHNILAQRPTLWVNMLIQA  236 (673)
T ss_pred             HHHHH--HHHh-hhhhhhhhhchhhhHHHHHHHHHhhccccchHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHH
Confidence            11111  1111 14567778999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccchhHHhHHHHHHHHHHHHHHHHhhcCCC--CcchhhhHHHHHHHHHHHHHHHHHHHhccccccCCcHHHH
Q 041810          258 LRSSSSLSGGALTATVSQLVFSTIAQAARDSLAVFGEE--PAYSSELVTWAVKETEDFALLLERHILASAAAAGGLRVVT  335 (750)
Q Consensus       258 L~~eg~~~~~~YI~~LS~~fFs~I~~t~~~f~~~F~d~--~~~~S~LV~Wa~~eie~f~~l~~rqv~~~~~aa~~l~~~~  335 (750)
                      .++....++..|-+.++.+.|..+..+..+-...|++.  |++...-+.|..++++.|-.+|..+.+.++.++..++..+
T Consensus       237 ~R~~l~~~~~~~qa~~~~~~~~~~S~A~~e~~~~~~~e~~~s~~~~~~~W~~~~~e~~~~~v~~~~~~~s~~~~~l~~~~  316 (673)
T KOG2215|consen  237 KRLSLQTSPMERQATFPKLRFSAISWALTESLISFGEENLPSYSDEEVLWLEELVELFKLLVAHNAFKTSLEAIHLRAAS  316 (673)
T ss_pred             HHHHHhhCccccccccchHHHhcCCcccCcccccccCCCCcccchhhhchhhhhhHHHHHHHHhccchhhHHHHHhhhcc
Confidence            99888777788999999999999999999999999998  8899999999999999999999999998888888999999


Q ss_pred             HHHHHHHHhhhhhhhcCCcchHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhccCccccCCCCCCCCCCCCCCcccCCCC
Q 041810          336 ETIQICLGHCSLLEARGLALSPVILRSFRPSVEHALSAYLKRIEKSSAALAAADDWLLAYPPAGARPFSSTNSLNTAVGS  415 (750)
Q Consensus       336 ecv~~a~~~c~~L~~vGLDl~~~L~~lL~p~ve~al~~~~~~i~e~i~~~~~~d~W~~~~~~~~~~~~~g~~~~~~~~~~  415 (750)
                      .|.+.+..+|..|+.+||-+...|..++.  ++++++.+.++.+.....+..-++|....++-..+...   +   ....
T Consensus       317 ~~~~~~~~~~~~Lq~~~lfl~~~ll~~~~--~~~~le~~~r~~~~~~~~l~el~~~~~at~~~l~~~s~---~---~~a~  388 (673)
T KOG2215|consen  317 ACLQLALTICKPLQMRELFLLNLLLKIFS--VERALERDFRVAQRRHHQLVELGRWSRSTKRLLFKHSE---S---LSAY  388 (673)
T ss_pred             cchhhhhhhhhhhhHhHhhhhhHHHHHhh--hhhhhhhhHHHHhhhHHHHHHhhhhcccchHHHHHHHH---H---HHHH
Confidence            99999999999999999999999999999  89999999999999999999999999763332211110   0   1134


Q ss_pred             ccccchhHHHHHHHHHHHHhhhccccccccchhHHHHHHHHHHHHHHHHHHhCCCCCcchhhccccccchhccccchHHH
Q 041810          416 QPKLSTSAHKFNALVQELLEDIGPLENLKLDGPALDGVFQAFNSYVSLLINALPGSTENEENLEGFSNKIVSMAETESQQ  495 (750)
Q Consensus       416 ~~~LT~S~~~F~~~v~~f~ed~~~L~~~~L~~~~~~~l~~lf~~y~~~l~~al~~~~~~~~~~~~~~~~~v~~a~t~~qq  495 (750)
                      .+..|+++++|.-++++|.+|++++.+.+.+..++..+.+.++.|++.+.++++++.++++..+....+++++|++..+|
T Consensus       389 ~~~~~~~~~r~~~~~~d~~~~l~~~~~~e~~s~~~~~~~q~~~~~ldtl~~~l~~s~~e~~~~~s~~a~iv~~a~~~~~q  468 (673)
T KOG2215|consen  389 RCRDTDEASRFLQVVQDFSEDLCDILKFEQGSKCLYTSFQVLNKELDTLGRQLPRSYEEQGPARSMVAEIVKRAEHTSEQ  468 (673)
T ss_pred             HhhhhhhhHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHcccchhhcCchHHHHHHHHHHhhhhHHH
Confidence            57999999999999999999999999999999999999999999999999999999888877778888999999999999


Q ss_pred             HHHHHhHHHHHHhHHHHHHHhhccCcCCcccCCcCCcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q 041810          496 VALLANASLLADELLPRAALKLLPLSSNRMEMTPRRASDRQNRFPEQREWKRKLQRLVDRLRDSFCRTHALDIIFTEDGE  575 (750)
Q Consensus       496 ~~ll~Na~~l~d~llp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~e~~~~l~~~~~kl~~~fc~~~~~~~i~~~~~~  575 (750)
                      ++.++++.++.++.||+...+-.+. ..+..|...+++++.++  |.++|++++-.+.++|++-||+++.+.++|.++|.
T Consensus       469 L~~ig~~lt~~~~~Llr~~le~s~~-l~~~~E~~~~ald~r~~--~ee~W~~~~L~t~s~Lk~l~ee~~~~gv~~~~~~~  545 (673)
T KOG2215|consen  469 LTLIGLDLTIRDEALLRSKLESSQL-LEGFKEGIADALDNRNR--EEESWVRYLLQTESALKDLSEELSDLGVIYLRQIS  545 (673)
T ss_pred             HHHHHhhHHHHHHhhhhhhHHHhhh-hhcchhhHHHHHHhhhh--HHHHHHHHHHhhHHHHHHHHHHhhhhhhhhHhhhh
Confidence            9999999999999999988755311 23346666778888887  89999999999999999999999999999999999


Q ss_pred             cccchhhHhhccCCCCCCCCCCChHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHhcCChhhHHhhhcCC
Q 041810          576 IRLNAEIYTCMDESMEEPEWFPSPIFQELFIKLTRMASIASDMFVGRERFATILLMRLTETVILWLADDQSFWAEIEEGP  655 (750)
Q Consensus       576 ~~l~~~~y~~~~~~~~~~~~~ps~~fq~lf~~l~~l~~~~~~~~~g~e~~~~~ll~rl~e~v~~~ls~~~~~w~~~e~~~  655 (750)
                      +++++++|.+             ++||++|.+.+.|+.+++|++.||++..++||++|+||+++|+   |+||-.+++++
T Consensus       546 ~~~e~d~~~n-------------l~~q~v~~~~~~~~~le~d~~l~k~~l~~~lLe~L~e~~~~~l---Q~l~~~~~~~~  609 (673)
T KOG2215|consen  546 HELEGDGWLN-------------LSSQLVVSKKQLMHLLEKDLPLGKLELAFQLLELLAETLSIAL---QSLWLKIDDEA  609 (673)
T ss_pred             cccccceEEe-------------hhHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHHHH---HHHHhhhcccc
Confidence            9999988855             7899999999999999999999999999999999999999999   89999999999


Q ss_pred             ccCCccchhhhhhHHHHHHHHHhcCCCcChhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCChHH
Q 041810          656 KPLGPLGLQQFYLDMEFVMLFSSQGRYLSRNLQQVIKNIIARAIEVVAATGIDPYSVLPEDDWF  719 (750)
Q Consensus       656 ~~~~~~glqq~~Ldm~f~~~~a~~g~~~s~~~~~~~~~~~~~a~~~~~~~g~dp~~~l~~d~wf  719 (750)
                      .|.+|.|++|||+||.|.++++.++||+.+..+.+-+-.+.++.+.|+++|++|++.+|.++||
T Consensus       610 dP~~~~~~~q~i~~m~~~v~~~~~~~~~~~~~~~i~~~~~~~~~a~~~~~~v~~~s~l~~~d~f  673 (673)
T KOG2215|consen  610 DPNIFAGIRQLILDMELPVCIAAFDRIEGELGSKIMQLNTLRAEAKFDAMGVNPQSDLPVDDVF  673 (673)
T ss_pred             CcchHHHHHHHHHHhhhhhhHHHhhhhhHHhhhhhHHHHHHHHHhhcccccCCccccccccccC
Confidence            9999999999999999999999999999999999999999999999999999999999999998

>KOG2346 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 []	Back alignment and domain information

>KOG2215 consensus Exocyst complex subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi	Back alignment and domain information

>KOG2069 consensus Golgi transport complex subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF15469 Sec5: Exocyst complex component Sec5	Back alignment and domain information

>KOG2033 consensus Low density lipoprotein B-like protein [Lipid transport and metabolism]	Back alignment and domain information

>KOG2347 consensus Sec5 subunit of exocyst complex [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells	Back alignment and domain information

>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []	Back alignment and domain information

>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events []	Back alignment and domain information

>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known	Back alignment and domain information

>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex	Back alignment and domain information

>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking	Back alignment and domain information

>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases	Back alignment and domain information

>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG4182 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane	Back alignment and domain information

>PF03081 Exo70: Exo70 exocyst complex subunit; InterPro: IPR004140 The Exo70 protein forms one subunit of the exocyst complex	Back alignment and domain information

>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		750
2d2s_A		235	Exocyst complex component EXO84; tethering complex	5e-49
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-14
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-09

>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2 Length = 235	Back alignment and structure

 Score =  171 bits (434), Expect = 5e-49
 Identities = 43/233 (18%), Positives = 97/233 (41%), Gaps = 11/233 (4%)

Query: 138 EGLSNMENWSVEFLETLEVLLAERRVDEALAALEEGQNTVREAKHRCTLSRSAIFS-LQS 196
              +    +  E +E +++ LA  R + A+  L + ++ + +   R +     + + +  
Sbjct: 9   SSTAQRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISL 68

Query: 197 AISEQRQKLADQLAGTICQPSTRGVELRSAVLALKKLGDGPRSHTLLLKSHHQRLQSYVQ 256
            I ++R+ ++ +L+ +I   S   V L+S    + KLG   ++  L L++    +Q  + 
Sbjct: 69  KIEQRREAISSKLSQSIL-SSNEIVHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLIL 127

Query: 257 SLRSSSSLSGGALTATVSQLVFSTIAQAARDSLAVFGEEPA-YSSELVTWAVKETEDFAL 315
            + S  +         ++ + F TI +   D   +F E  A  SS LV W   E ++   
Sbjct: 128 QIGSVDNP--TNYLTQLAVIRFQTIKKTVEDFQDIFKELGAKISSILVDWCSDEVDNHFK 185

Query: 316 LLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSFRPSVE 368
           L+++ +L          +   +I+        L+A GL     +    + + +
Sbjct: 186 LIDKQLL------NDEMLSPGSIKSSRKQIDGLKAVGLDFVYKLDEFIKKNSD 232

PyMOL of 2d2s

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		750
2d2s_A		235	Exocyst complex component EXO84; tethering complex	100.0
2b1e_A		564	Exocyst complex component EXO70; tethering complex	82.82
2pft_A		571	Exocytosis protein; helix-turn-helix, endocytosis-	82.32

>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2	Back alignment and structure

Probab=100.00  E-value=6.4e-45  Score=376.00  Aligned_cols=219  Identities=20%  Similarity=0.267  Sum_probs=197.9

Q ss_pred             cchhHHHHhHHHHHHHHhccCHHHHHHHHHHHHHHHHhhhhcCC-CChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCh
Q 041810          142 NMENWSVEFLETLEVLLAERRVDEALAALEEGQNTVREAKHRCT-LSRSAIFSLQSAISEQRQKLADQLAGTICQPSTRG  220 (750)
Q Consensus       142 ~~l~wL~elpdeLDv~IAer~feeAV~ll~k~~~~l~~~~~~~~-~~~~~~~~i~~ki~er~~~L~~~L~~~l~~~s~~~  220 (750)
                      +.++|+.++||+|||+||+|+||+||++++++++.+..+++..+ .+.+....|+.|+++|++.|+++|.+++.+ +.++
T Consensus        13 ~~~~wl~~~~deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~~-~~~~   91 (235)
T 2d2s_A           13 QRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS-SNEI   91 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT-CSSH
T ss_pred             hhHHHHHcccHHHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCH
Confidence            67899999999999999999999999999999999988765321 234567899999999999999999999976 6778


Q ss_pred             HHHHHHHHHHHhcCCCcHHHHHHHHHhHHHHHHHhhhccccccccccchhHHhHHHHHHHHHHHHHHHHhhcCC-CCcch
Q 041810          221 VELRSAVLALKKLGDGPRSHTLLLKSHHQRLQSYVQSLRSSSSLSGGALTATVSQLVFSTIAQAARDSLAVFGE-EPAYS  299 (750)
Q Consensus       221 ~elr~aV~lL~rLG~~~~A~~lFL~~rs~~L~~~lr~L~~eg~~~~~~YI~~LS~~fFs~I~~t~~~f~~~F~d-~~~~~  299 (750)
                      .+++++|++|+|||++++||++||++|+.+|++++|++.++|+  +..||.++|.+||+.|++|+++|+.+|++ +|.|+
T Consensus        92 ~~~r~~v~~L~rLg~~~~A~~lfL~~rs~~i~~~~r~l~~~gd--~~~Yi~~Ls~i~Fs~I~~t~~~f~~~F~~~~~~~~  169 (235)
T 2d2s_A           92 VHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQIGSVDN--PTNYLTQLAVIRFQTIKKTVEDFQDIFKELGAKIS  169 (235)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC--CCS--HHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHH
T ss_pred             HHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHHHHhcccCC--HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccc
Confidence            8999999999999999999999999999999999999988885  58999999999999999999999999999 77899


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhccccccCCcHHHHHHHHHHHHhhhhhhhcCCcchHHHHhhhhHHHHH
Q 041810          300 SELVTWAVKETEDFALLLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSFRPSVEH  369 (750)
Q Consensus       300 S~LV~Wa~~eie~f~~l~~rqv~~~~~aa~~l~~~~ecv~~a~~~c~~L~~vGLDl~~~L~~lL~p~ve~  369 (750)
                      |+||.||++|++.|+.+|+||+++ .   +++.+  +||+++++||++|+++||||+|+|+++|+|++++
T Consensus       170 S~lV~Wa~~eve~f~~l~~rqv~~-~---~~l~~--ecv~i~~~~~~~L~~vGLd~~~~L~~ll~~~~~~  233 (235)
T 2d2s_A          170 SILVDWCSDEVDNHFKLIDKQLLN-D---EMLSP--GSIKSSRKQIDGLKAVGLDFVYKLDEFIKKNSDK  233 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTC-------CCH--HHHHHHHHHHHGGGGGTCCCHHHHHHHHHTTGGG
T ss_pred             cHHHHHHHHHHHHHHHHHHHHccC-C---ccHHH--HHHHHHHHHHHHHHHcCCChHHHHHHHHhhhHhh
Confidence            999999999999999999999987 3   57754  9999999999999999999999999999999886

PyMOL of 2d2s

>2b1e_A Exocyst complex component EXO70; tethering complex, endocytosis/exocytosis complex; 2.00A {Saccharomyces cerevisiae} PDB: 2b7m_A 2pfv_A	Back alignment and structure

>2pft_A Exocytosis protein; helix-turn-helix, endocytosis-exocytosis complex; 2.25A {Mus musculus}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		750
d2d2sa1		229	a.118.17.2 (A:525-753) Exocyst complex component E	2e-46

>d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229	Back information, alignment and structure


class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO84
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  163 bits (413), Expect = 2e-46
 Identities = 41/230 (17%), Positives = 97/230 (42%), Gaps = 12/230 (5%)

Query: 141 SNMENWSVEFLETLEVLLAERRVDEALAALEEGQNTVREAKHRCTLSRSAIFS-LQSAIS 199
             ++ +  E +E +++ LA  R + A+  L + ++ + +   R +     + + +   I 
Sbjct: 7   QRLK-FLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIE 65

Query: 200 EQRQKLADQLAGTICQPSTRGVELRSAVLALKKLGDGPRSHTLLLKSHHQRLQSYVQSLR 259
           ++R+ ++ +L+ +I   S   V L+S    + KLG   ++  L L++    +Q  +  + 
Sbjct: 66  QRREAISSKLSQSI-LSSNEIVHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQIG 124

Query: 260 SSSSLSGGALTATVSQLVFSTIAQAARDSLAVF-GEEPAYSSELVTWAVKETEDFALLLE 318
           S  + +       ++ + F TI +   D   +F       SS LV W   E ++   L++
Sbjct: 125 SVDNPT--NYLTQLAVIRFQTIKKTVEDFQDIFKELGAKISSILVDWCSDEVDNHFKLID 182

Query: 319 RHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSFRPSVE 368
           + +L          +   +I+        L+A GL     +    + + +
Sbjct: 183 KQLL------NDEMLSPGSIKSSRKQIDGLKAVGLDFVYKLDEFIKKNSD 226

PyMOL of d2d2sa1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		750
d2d2sa1		229	Exocyst complex component EXO84 {Baker's yeast (Sa	100.0
d2b7ma1		551	Exocyst complex component EXO70 {Baker's yeast (Sa	89.16

>d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO84
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.1e-41  Score=344.50  Aligned_cols=219  Identities=19%  Similarity=0.268  Sum_probs=193.7

Q ss_pred             cchhHHHHhHHHHHHHHhccCHHHHHHHHHHHHHHHHhhhhcCCCCh-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCh
Q 041810          142 NMENWSVEFLETLEVLLAERRVDEALAALEEGQNTVREAKHRCTLSR-SAIFSLQSAISEQRQKLADQLAGTICQPSTRG  220 (750)
Q Consensus       142 ~~l~wL~elpdeLDv~IAer~feeAV~ll~k~~~~l~~~~~~~~~~~-~~~~~i~~ki~er~~~L~~~L~~~l~~~s~~~  220 (750)
                      +.++|+.|+||+||||||+|+||+||++++++++++.++++.+...+ .....+..++++|++.|+++|.+.++. +.+.
T Consensus         7 ~~~~wl~d~~d~LDv~Ia~~~feeAl~ll~~~e~~l~~~~~~~~~~~~~~~~~i~~kv~~r~~~L~~~L~~~l~~-~~~~   85 (229)
T d2d2sa1           7 QRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS-SNEI   85 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT-CSSH
T ss_pred             hhhhhHhcccHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCh
Confidence            56899999999999999999999999999999999998876543333 345679999999999999999999875 5678


Q ss_pred             HHHHHHHHHHHhcCCCcHHHHHHHHHhHHHHHHHhhhccccccccccchhHHhHHHHHHHHHHHHHHHHhhcCCC-Ccch
Q 041810          221 VELRSAVLALKKLGDGPRSHTLLLKSHHQRLQSYVQSLRSSSSLSGGALTATVSQLVFSTIAQAARDSLAVFGEE-PAYS  299 (750)
Q Consensus       221 ~elr~aV~lL~rLG~~~~A~~lFL~~rs~~L~~~lr~L~~eg~~~~~~YI~~LS~~fFs~I~~t~~~f~~~F~d~-~~~~  299 (750)
                      ++++++|++|+|||.+++||++||++|+.+|++.+++++++|++  ..||.+++.+||+.|++|+.+|+++|+++ |.|+
T Consensus        86 ~~~~~~v~~L~rLg~~~~A~~lfL~~rs~~l~~~i~~~~~~~~~--~~Yi~~l~~i~f~~i~~t~~~y~aiF~~~~~~~s  163 (229)
T d2d2sa1          86 VHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQIGSVDNP--TNYLTQLAVIRFQTIKKTVEDFQDIFKELGAKIS  163 (229)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC--CCSH--HHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHH
T ss_pred             HHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHhcCcCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhh
Confidence            89999999999999999999999999999999999999999975  69999999999999999999999999765 5578


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhccccccCCcHHHHHHHHHHHHhhhhhhhcCCcchHHHHhhhhHHHHH
Q 041810          300 SELVTWAVKETEDFALLLERHILASAAAAGGLRVVTETIQICLGHCSLLEARGLALSPVILRSFRPSVEH  369 (750)
Q Consensus       300 S~LV~Wa~~eie~f~~l~~rqv~~~~~aa~~l~~~~ecv~~a~~~c~~L~~vGLDl~~~L~~lL~p~ve~  369 (750)
                      |.|+.||.+|++.|+.+|+||++++.      +++++||+++++||+.|+++||||+|+|+++|++++++
T Consensus       164 S~lv~Wa~~ei~~f~~~l~r~l~~~~------~~~~~~i~~~~~~c~~L~~vGlDf~~lL~~ll~~~~~~  227 (229)
T d2d2sa1         164 SILVDWCSDEVDNHFKLIDKQLLNDE------MLSPGSIKSSRKQIDGLKAVGLDFVYKLDEFIKKNSDK  227 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTC---------CCHHHHHHHHHHHHGGGGGTCCCHHHHHHHHHTTGGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcccch------hHHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHhhHHh
Confidence            99999999999999999999997543      45789999999999999999999999999999999875

PyMOL of d2d2sa1

>d2b7ma1 a.118.17.2 (A:73-623) Exocyst complex component EXO70 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure