Citrus Sinensis ID: 041815

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-----
MDGKEAAPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVNPNYNSPLELKTTTSFAAQNLPSRGGHKSHQAHDLQLKNHKTLSKCNGCKRPAFGLMYRCELCNFNLHIPCMFID
ccccccccEEEEEccccccEEEEEEccEEEEEEccccccccccEEEEccccEEEcHHHHHHccccccccccccccccccccccHHHHcccccccEEEEEccccccEEEEEEccEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEEccccccHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHccccccccEEEEEEEcccccEEEEEEEEEccEEEEEEEccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccccccccEEEEEccccccccccccccccccccccccccEEEEEcccccccccEEEEEcccccccccccccEEEEcccccccccccccc
cccccccccEEEEEcccEEEEEEEEccEEEEcccccccccEEccEEEccccEEEcHHHHHcHHHcHHHEEccHHHHcccccccHHHHHHHcccccEEEEEEccEEEEEEEEccEEEEEcHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHcccEEEEEEEHHHHHHHHccccccccccEEEEEEEEccccEEEEEEEEEccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHcccHHHcHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEccEEEEEEEEHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHccEEEEEcHHHHcHHHHHHHHHHccccccEcccccccHHHHHHHHHHHHccccccHHHHHEEEEEccccccEEEcEEccccccccccccccEEEEEccccccccccccccEEEEccccccccccccEEEEEEccccccccc
mdgkeaapaigidlgttyscvgvwQHDRVEIIandqgnrttpsyvaftdkecfvgdaaknqvamnptntvfdakrligrrfgdvsvqsdvklwpfevvagpkdkpmivvnckgeekRYAAEEISSMVLAKMRDIAedyvgspvsnavvtvpayftdsqrqATKDAGAMAGLNVLKIISEPTAAAIAYGldrkatsekNVLIFDlgggtfdvSLLTIEKGIFKVKatagdthlggedfdnRMVNHFIQEFKRktekdisgspRAVQRLRKDCERAKRILSSTSQTTIEIDSlyegidfssvMTRARFEELNMDLFRKCIKHVDMclrtgktdnssvdDVVIVGGSARIPKVQQLLQEFFngkrlckninpdeAVAYGAAVQAAVLsgnrsdkvedIVILdvnpnynsplelktttsfaaqnlpsrgghkshqahdlqlknhktlskcngckrpafgLMYRCElcnfnlhipcmfid
mdgkeaapaigidlgtTYSCVGVWQHDRVEIiandqgnrtTPSYVAFTDKECFVGDAaknqvamnptntvfDAKRLIGRRFGdvsvqsdvklwpfevvagpkdkpmivVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDThlggedfdnrMVNHFIQEfkrktekdisgspravqrlrkDCERakrilsstsqttieidslyegidfSSVMTRARFEELNMDLFRKCIKHVDMCLrtgktdnssvdDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVNPNYNSPLELKTTTSFAAQNLPSRGGHKSHQAHDLQLKNHKTLSKCNGCKRPAFGLMYRCELCNFNLHIPCMFID
MDGKEAAPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNssvddvvivggsARIPKVQQLLQEFFNGKRLCKNINPDEavaygaavqaavLSGNRSDKVEDIVILDVNPNYNSPLELKTTTSFAAQNLPSRGGHKSHQAHDLQLKNHKTLSKCNGCKRPAFGLMYRCELCNFNLHIPCMFID
********AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEF*********************************QTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVNPNYNS***********************************TLSKCNGCKRPAFGLMYRCELCNFNLHIPCMFI*
*****AA***GIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVNPNYNSPLELKTTTSFAAQNLPSRGGHKSHQAHDLQLKNHKTLSKCNGCKRPAFGLMYRCELCNFNLHIPCMFID
MDGKEAAPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVNPNYNSPLELKTTTSFAAQNL************DLQLKNHKTLSKCNGCKRPAFGLMYRCELCNFNLHIPCMFID
******APAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVNPNYNSPLELKTTTSFAAQNLPSRGGHKSHQAHDLQLKNHKTLSKCNGCKRPAFGLMYRCELCNFNLHIPCMFID
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MDGKEAAPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVNPNYNSPLELKTTTSFAAQNLPSRGGHKSHQAHDLQLKNHKTLSKCNGCKRPAFGLMYRCELCNFNLHIPCMFID
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query475 2.2.26 [Sep-21-2011]
P09189 651 Heat shock cognate 70 kDa N/A no 0.846 0.617 0.801 0.0
P22953 651 Probable mediator of RNA yes no 0.846 0.617 0.799 0.0
P27322 644 Heat shock cognate 70 kDa N/A no 0.846 0.624 0.794 0.0
Q9LHA8 650 Probable mediator of RNA no no 0.846 0.618 0.794 0.0
O65719 649 Heat shock 70 kDa protein no no 0.846 0.619 0.784 0.0
P22954 653 Probable mediator of RNA no no 0.846 0.615 0.782 0.0
Q9C7X7 617 Heat shock 70 kDa protein no no 0.846 0.651 0.789 0.0
P24629 650 Heat shock cognate 70 kDa N/A no 0.846 0.618 0.780 0.0
P29357 653 Chloroplast envelope memb N/A no 0.846 0.615 0.779 0.0
P26413 645 Heat shock 70 kDa protein no no 0.829 0.610 0.777 0.0
>sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1 Back     alignment and function desciption
 Score =  680 bits (1755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/404 (80%), Positives = 363/404 (89%), Gaps = 2/404 (0%)

Query: 1   MDGKEAAPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKN 60
           M GK   PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTD E  +GDAAKN
Sbjct: 1   MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKN 60

Query: 61  QVAMNPTNTVFDAKRLIGRRFGDVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAA 120
           QVAMNP NTVFDAKRLIGRRF D SVQSD+KLWPF+V+ GP DKPMIVV  KGEEK++AA
Sbjct: 61  QVAMNPINTVFDAKRLIGRRFSDPSVQSDIKLWPFKVIPGPGDKPMIVVTYKGEEKQFAA 120

Query: 121 EEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEP 180
           EEISSMVL KM++IAE Y+G+ + NAVVTVPAYF DSQRQATKDAG +AGLNV++II+EP
Sbjct: 121 EEISSMVLTKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP 180

Query: 181 TAAAIAYGLDRKATS--EKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFD 238
           TAAAIAYGLD+KA+S  EKNVLIFDLGGGTFDVSLLTIE+GIF+VKATAGDTHLGGEDFD
Sbjct: 181 TAAAIAYGLDKKASSAGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 240

Query: 239 NRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFS 298
           NRMVNHF+QEFKRK +KDISG+PRA++RLR  CERAKR LSST+QTTIEIDSLYEGIDF 
Sbjct: 241 NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY 300

Query: 299 SVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFF 358
           S +TRARFEELNMDLFRKC++ V+ CLR  K D SSV DVV+VGGS RIPKVQQLLQ+FF
Sbjct: 301 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFF 360

Query: 359 NGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVNP 402
           NGK LCK+INPDEAVAYGAAVQAA+LSG  ++KV+D+++LDV P
Sbjct: 361 NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTP 404

Petunia hybrida (taxid: 4102)
>sp|P22953|MD37E_ARATH Probable mediator of RNA polymerase II transcription subunit 37e OS=Arabidopsis thaliana GN=MED37E PE=1 SV=3 Back     alignment and function description
>sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LHA8|MD37C_ARATH Probable mediator of RNA polymerase II transcription subunit 37c OS=Arabidopsis thaliana GN=MED37C PE=1 SV=1 Back     alignment and function description
>sp|O65719|HSP7C_ARATH Heat shock 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSP70-3 PE=1 SV=1 Back     alignment and function description
>sp|P22954|MD37D_ARATH Probable mediator of RNA polymerase II transcription subunit 37c OS=Arabidopsis thaliana GN=MED37D PE=1 SV=2 Back     alignment and function description
>sp|Q9C7X7|HSP7N_ARATH Heat shock 70 kDa protein 18 OS=Arabidopsis thaliana GN=HSP70-18 PE=1 SV=1 Back     alignment and function description
>sp|P24629|HSP71_SOLLC Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1 Back     alignment and function description
>sp|P29357|HSP7E_SPIOL Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3 Back     alignment and function description
>sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query475
225440324 649 PREDICTED: heat shock cognate 70 kDa pro 0.846 0.619 0.819 0.0
356572327 654 PREDICTED: heat shock cognate 70 kDa pro 0.846 0.614 0.814 0.0
211906496 648 heat shock protein 70 [Gossypium hirsutu 0.846 0.620 0.814 0.0
242083856 649 hypothetical protein SORBIDRAFT_08g01875 0.846 0.619 0.809 0.0
414868557 649 TPA: heat shock protein 70 [Zea mays] 0.846 0.619 0.809 0.0
115486793 649 Os11g0703900 [Oryza sativa Japonica Grou 0.846 0.619 0.806 0.0
26985219 647 non-cell-autonomous heat shock cognate p 0.846 0.621 0.806 0.0
449449994 648 PREDICTED: heat shock cognate 70 kDa pro 0.846 0.620 0.811 0.0
255573627 647 heat shock protein, putative [Ricinus co 0.846 0.621 0.806 0.0
108864707 615 Heat shock cognate 70 kDa protein, putat 0.846 0.653 0.806 0.0
>gi|225440324|ref|XP_002263599.1| PREDICTED: heat shock cognate 70 kDa protein isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  690 bits (1780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/404 (81%), Positives = 366/404 (90%), Gaps = 2/404 (0%)

Query: 1   MDGKEAAPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKN 60
           M GK   PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD E  VGDAAKN
Sbjct: 1   MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLVGDAAKN 60

Query: 61  QVAMNPTNTVFDAKRLIGRRFGDVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAA 120
           QVAMNP NTVFDAKRLIGRRF D +VQSD+KLWPF+VVAGP DKPMIVVN KGEEK++AA
Sbjct: 61  QVAMNPINTVFDAKRLIGRRFSDATVQSDIKLWPFKVVAGPGDKPMIVVNYKGEEKQFAA 120

Query: 121 EEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEP 180
           EEISSMVL KMR+IAE Y+GS V NAVVTVPAYF DSQRQATKDAG +AGLNV++II+EP
Sbjct: 121 EEISSMVLMKMREIAEAYLGSAVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP 180

Query: 181 TAAAIAYGLDRKATS--EKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFD 238
           TAAAIAYGLD+KATS  EKNVLIFDLGGGTFDVSLLTIE+GIF+VKATAGDTHLGGEDFD
Sbjct: 181 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 240

Query: 239 NRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFS 298
           NRMVNHF+QEFKRK +KDISG+PRA++RLR  CERAKR LSST+QTTIEIDSLYEG+DF 
Sbjct: 241 NRMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFY 300

Query: 299 SVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFF 358
           + +TRARFEELNMDLFRKC++ V+ CLR  K D SSV DVV+VGGS RIPKVQQLLQ+FF
Sbjct: 301 TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFF 360

Query: 359 NGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVNP 402
           NGK LCK+INPDEAVAYGAAVQAA+LSG  +DKV+D+++LDV P
Sbjct: 361 NGKELCKSINPDEAVAYGAAVQAAILSGEGNDKVQDLLLLDVTP 404

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356572327|ref|XP_003554320.1| PREDICTED: heat shock cognate 70 kDa protein-like [Glycine max] Back     alignment and taxonomy information
>gi|211906496|gb|ACJ11741.1| heat shock protein 70 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|242083856|ref|XP_002442353.1| hypothetical protein SORBIDRAFT_08g018750 [Sorghum bicolor] gi|241943046|gb|EES16191.1| hypothetical protein SORBIDRAFT_08g018750 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|414868557|tpg|DAA47114.1| TPA: heat shock protein 70 [Zea mays] Back     alignment and taxonomy information
>gi|115486793|ref|NP_001068540.1| Os11g0703900 [Oryza sativa Japonica Group] gi|62733235|gb|AAX95352.1| dnaK-type molecular chaperone hsp70 - rice (fragment) [Oryza sativa Japonica Group] gi|77552703|gb|ABA95500.1| Heat shock cognate 70 kDa protein, putative, expressed [Oryza sativa Japonica Group] gi|113645762|dbj|BAF28903.1| Os11g0703900 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|26985219|gb|AAN86274.1| non-cell-autonomous heat shock cognate protein 70 [Cucurbita maxima] Back     alignment and taxonomy information
>gi|449449994|ref|XP_004142749.1| PREDICTED: heat shock cognate 70 kDa protein-like isoform 1 [Cucumis sativus] gi|449483852|ref|XP_004156712.1| PREDICTED: heat shock cognate 70 kDa protein-like isoform 1 [Cucumis sativus] Back     alignment and taxonomy information
>gi|255573627|ref|XP_002527736.1| heat shock protein, putative [Ricinus communis] gi|223532877|gb|EEF34649.1| heat shock protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|108864707|gb|ABA95501.2| Heat shock cognate 70 kDa protein, putative, expressed [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query475
TAIR|locus:2181833 651 HSC70-1 "heat shock cognate pr 0.846 0.617 0.752 4e-161
TAIR|locus:2101222 650 HSP70 "heat shock protein 70" 0.846 0.618 0.742 2e-159
TAIR|locus:2074984 649 AT3G09440 [Arabidopsis thalian 0.846 0.619 0.735 6.1e-158
TAIR|locus:2010713 617 ERD2 "EARLY-RESPONSIVE TO DEHY 0.846 0.651 0.740 1.3e-157
TAIR|locus:2181818 653 Hsp70-2 [Arabidopsis thaliana 0.846 0.615 0.737 2.1e-157
TAIR|locus:2200462 646 Hsp70b "heat shock protein 70B 0.829 0.609 0.696 3.9e-147
UNIPROTKB|Q5NVM9 646 HSPA8 "Heat shock cognate 71 k 0.829 0.609 0.688 8.9e-141
UNIPROTKB|F1NRW7 647 HSPA8 "Heat shock cognate 71 k 0.829 0.608 0.688 2.4e-140
UNIPROTKB|F1NWP3 646 HSPA8 "Heat shock cognate 71 k 0.829 0.609 0.688 2.4e-140
UNIPROTKB|P19120 650 HSPA8 "Heat shock cognate 71 k 0.829 0.606 0.686 2.4e-140
TAIR|locus:2181833 HSC70-1 "heat shock cognate protein 70-1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1569 (557.4 bits), Expect = 4.0e-161, P = 4.0e-161
 Identities = 304/404 (75%), Positives = 339/404 (83%)

Query:     1 MDGKEAAPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKN 60
             M GK   PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD E  +GDAAKN
Sbjct:     1 MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 60

Query:    61 QVAMNPTNTVFDAKRLIGRRFGDVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAA 120
             QVAMNP NTVFDAKRLIGRRF D SVQSD+KLWPF++ AGP DKPMI V  KGEEK +AA
Sbjct:    61 QVAMNPVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPADKPMIYVEYKGEEKEFAA 120

Query:   121 EEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEP 180
             EEISSMVL KMR+IAE Y+G  + NAVVTVPAYF DSQRQATKDAG +AGLNV++II+EP
Sbjct:   121 EEISSMVLIKMREIAEAYLGVTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP 180

Query:   181 TAAAIAYGLDRKATS--EKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFD 238
             TAAAIAYGLD+KATS  EKNVLIFDLGGGTFDVSLLTIE+GIF+VKATAGDTHLGGEDFD
Sbjct:   181 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 240

Query:   239 NRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFS 298
             NRMVNHF+QEFKRK++KDI+G+PRA++RLR  CERAKR LSST+QTTIEIDSLYEGIDF 
Sbjct:   241 NRMVNHFVQEFKRKSKKDITGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFY 300

Query:   299 SVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNXXXXXXXXXXXXARIPKVQQLLQEFF 358
             S +TRARFEELNMDLFRKC++ V+ CLR  K D              RIPKVQQLLQ+FF
Sbjct:   301 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 360

Query:   359 NGKRLCKNINPDEXXXXXXXXXXXXLSGNRSDKVEDIVILDVNP 402
             NGK LCK+INPDE            LSG  ++KV+D+++LDV P
Sbjct:   361 NGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQDLLLLDVTP 404
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM;IDA
GO:0005829 "cytosol" evidence=IDA;RCA;TAS
GO:0006457 "protein folding" evidence=TAS
GO:0009408 "response to heat" evidence=IEP;IMP
GO:0005634 "nucleus" evidence=IDA
GO:0009409 "response to cold" evidence=IEP
GO:0009507 "chloroplast" evidence=IDA
GO:0005730 "nucleolus" evidence=IDA
GO:0009615 "response to virus" evidence=IEP
GO:0022626 "cytosolic ribosome" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP;RCA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0042742 "defense response to bacterium" evidence=IMP
GO:0050832 "defense response to fungus" evidence=IMP
GO:0048046 "apoplast" evidence=IDA
GO:0002020 "protease binding" evidence=IPI
GO:0009506 "plasmodesma" evidence=IDA
GO:0010187 "negative regulation of seed germination" evidence=IMP
GO:0090332 "stomatal closure" evidence=IMP
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0006096 "glycolysis" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
TAIR|locus:2101222 HSP70 "heat shock protein 70" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074984 AT3G09440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010713 ERD2 "EARLY-RESPONSIVE TO DEHYDRATION 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2181818 Hsp70-2 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200462 Hsp70b "heat shock protein 70B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5NVM9 HSPA8 "Heat shock cognate 71 kDa protein" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
UNIPROTKB|F1NRW7 HSPA8 "Heat shock cognate 71 kDa protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NWP3 HSPA8 "Heat shock cognate 71 kDa protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P19120 HSPA8 "Heat shock cognate 71 kDa protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P29843HSP7A_DROMENo assigned EC number0.71640.82940.6146yesno
P24629HSP71_SOLLCNo assigned EC number0.78020.84630.6184N/Ano
O73885HSP7C_CHICKNo assigned EC number0.72360.82730.6083yesno
Q71U34HSP7C_SAGOENo assigned EC number0.73110.82730.6083N/Ano
P08418HSP70_SCHMANo assigned EC number0.71960.82310.6138N/Ano
P02827HSP70_XENLANo assigned EC number0.70810.82730.6074N/Ano
Q9U639HSP7D_MANSENo assigned EC number0.70950.83150.6058N/Ano
Q01877HSP71_PUCGRNo assigned EC number0.70050.82730.6064N/Ano
P63018HSP7C_RATNo assigned EC number0.73110.82730.6083yesno
P63017HSP7C_MOUSENo assigned EC number0.73110.82730.6083yesno
P29357HSP7E_SPIOLNo assigned EC number0.77970.84630.6156N/Ano
P25840HSP70_CHLRENo assigned EC number0.72520.840.6138N/Ano
Q91233HSP70_ONCTSNo assigned EC number0.70950.83150.6133N/Ano
Q5NVM9HSP7C_PONABNo assigned EC number0.73360.82730.6083yesno
P18694HSP72_USTMANo assigned EC number0.72220.82310.6062N/Ano
Q4U0F3HS71B_BOSMUNo assigned EC number0.71310.82730.6131N/Ano
P22953MD37E_ARATHNo assigned EC number0.79950.84630.6175yesno
P27322HSP72_SOLLCNo assigned EC number0.79450.84630.6242N/Ano
Q9TUG3HSP72_CAPHINo assigned EC number0.70600.83150.6210N/Ano
Q96W30HSP72_PARBANo assigned EC number0.71170.82730.6009N/Ano
P36415HS7C1_DICDINo assigned EC number0.71570.82940.6156yesno
Q90473HSP7C_DANRENo assigned EC number0.70700.83150.6086yesno
P08108HSP70_ONCMYNo assigned EC number0.72720.83150.6067N/Ano
P09189HSP7C_PETHYNo assigned EC number0.80190.84630.6175N/Ano
P19378HSP7C_CRIGRNo assigned EC number0.72860.82730.6083yesno
A2Q0Z1HSP7C_HORSENo assigned EC number0.73110.82730.6083yesno
O59855HSP72_SCHPONo assigned EC number0.71640.82520.6058yesno
P11143HSP70_MAIZENo assigned EC number0.78300.83360.6139N/Ano
P19120HSP7C_BOVINNo assigned EC number0.73110.82730.6046yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00021301001
SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (649 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00002640001
SubName- Full=Chromosome undetermined scaffold_134, whole genome shotgun sequence; (416 aa)
  •  •  0.889
GSVIVG00019136001
SubName- Full=Chromosome chr15 scaffold_19, whole genome shotgun sequence; (419 aa)
  •  •  0.889
GSVIVG00033001001
SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (352 aa)
  •  •  0.882
GSVIVG00016875001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (357 aa)
  •  •  0.880
GSVIVG00033682001
SubName- Full=Chromosome chr8 scaffold_68, whole genome shotgun sequence;; Essential component [...] (313 aa)
• •   • 0.623
GSVIVG00015306001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence;; Essential component [...] (298 aa)
• •   • 0.584
GSVIVG00038657001
SubName- Full=Putative uncharacterized protein (Chromosome chr18 scaffold_96, whole genome shot [...] (253 aa)
  •     0.498
GSVIVG00023374001
SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (172 aa)
  •     0.498
GSVIVG00014341001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (138 aa)
  •     0.497
GSVIVG00015128001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (138 aa)
  •     0.496

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query475
cd10233376 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding 0.0
PTZ00009 653 PTZ00009, PTZ00009, heat shock 70 kDa protein; Pro 0.0
cd10241374 cd10241, HSPA5-like_NBD, Nucleotide-binding domain 0.0
pfam00012 598 pfam00012, HSP70, Hsp70 protein 0.0
cd10170369 cd10170, HSP70_NBD, Nucleotide-binding domain of t 1e-175
PRK00290 627 PRK00290, dnaK, molecular chaperone DnaK; Provisio 1e-173
cd10234376 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding d 1e-163
COG0443 579 COG0443, DnaK, Molecular chaperone [Posttranslatio 1e-158
TIGR02350 595 TIGR02350, prok_dnaK, chaperone protein DnaK 1e-157
cd11733377 cd11733, HSPA9-like_NBD, Nucleotide-binding domain 1e-151
cd11734373 cd11734, Ssq1_like_NBD, Nucleotide-binding domain 1e-143
PRK13411 653 PRK13411, PRK13411, molecular chaperone DnaK; Prov 1e-135
CHL00094 621 CHL00094, dnaK, heat shock protein 70 1e-135
cd10228381 cd10228, HSPA4_like_NDB, Nucleotide-binding domain 1e-134
PRK13410 668 PRK13410, PRK13410, molecular chaperone DnaK; Prov 1e-129
PTZ00400 663 PTZ00400, PTZ00400, DnaK-type molecular chaperone; 1e-129
PLN03184 673 PLN03184, PLN03184, chloroplast Hsp70; Provisional 1e-120
cd10235339 cd10235, HscC_like_NBD, Nucleotide-binding domain 1e-118
PRK05183 616 PRK05183, hscA, chaperone protein HscA; Provisiona 1e-114
cd10236355 cd10236, HscA_like_NBD, Nucleotide-binding domain 1e-113
PTZ00186 657 PTZ00186, PTZ00186, heat shock 70 kDa precursor pr 1e-113
cd10238375 cd10238, HSPA14-like_NBD, Nucleotide-binding domai 1e-112
cd10237417 cd10237, HSPA13-like_NBD, Nucleotide-binding domai 1e-111
TIGR01991 599 TIGR01991, HscA, Fe-S protein assembly chaperone H 1e-108
cd10230388 cd10230, HYOU1-like_NBD, Nucleotide-binding domain 9e-99
cd10232386 cd10232, ScSsz1p_like_NBD, Nucleotide-binding doma 4e-94
cd11732377 cd11732, HSP105-110_like_NBD, Nucleotide-binding d 3e-85
cd11737383 cd11737, HSPA4_NBD, Nucleotide-binding domain of H 6e-85
cd11739383 cd11739, HSPH1_NBD, Nucleotide-binding domain of H 7e-84
cd11738383 cd11738, HSPA4L_NBD, Nucleotide-binding domain of 1e-78
PRK01433 595 PRK01433, hscA, chaperone protein HscA; Provisiona 6e-58
cd10231415 cd10231, YegD_like, Escherichia coli YegD, a putat 3e-31
cd10229404 cd10229, HSPA12_like_NBD, Nucleotide-binding domai 6e-17
cd10225320 cd10225, MreB_like, MreB and similar proteins 1e-11
cd10227312 cd10227, ParM_like, Plasmid segregation protein Pa 1e-09
TIGR02529239 TIGR02529, EutJ, ethanolamine utilization protein 4e-08
PRK13930335 PRK13930, PRK13930, rod shape-determining protein 2e-07
PRK13928336 PRK13928, PRK13928, rod shape-determining protein 3e-07
TIGR00904333 TIGR00904, mreB, cell shape determining protein, M 4e-07
pfam06723327 pfam06723, MreB_Mbl, MreB/Mbl protein 7e-07
COG4820277 COG4820, EutJ, Ethanolamine utilization protein, p 1e-06
COG1077342 COG1077, MreB, Actin-like ATPase involved in cell 9e-06
PRK11678450 PRK11678, PRK11678, putative chaperone; Provisiona 2e-05
PRK13929335 PRK13929, PRK13929, rod-share determining protein 4e-05
pfam0764930 pfam07649, C1_3, C1-like domain 5e-05
cd00012185 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide- 6e-05
PRK13927334 PRK13927, PRK13927, rod shape-determining protein 7e-05
cd07809487 cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1e-04
TIGR01312481 TIGR01312, XylB, D-xylulose kinase 1e-04
PRK15080267 PRK15080, PRK15080, ethanolamine utilization prote 0.001
smart0029144 smart00291, ZnF_ZZ, Zinc-binding domain, present i 0.003
COG1070502 COG1070, XylB, Sugar (pentulose and hexulose) kina 0.004
>gnl|CDD|212675 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins Back     alignment and domain information 
 Score =  746 bits (1929), Expect = 0.0
 Identities = 282/377 (74%), Positives = 323/377 (85%), Gaps = 1/377 (0%)

Query: 9   AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTN 68
           AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD E  +GDAAKNQVAMNPTN
Sbjct: 1   AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 60

Query: 69  TVFDAKRLIGRRFGDVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVL 128
           TVFDAKRLIGR+F D  VQSD+K WPF+VV G    P+IV   KGE K +  EEISSMVL
Sbjct: 61  TVFDAKRLIGRKFSDPVVQSDMKHWPFKVVNGGGKPPIIV-EYKGETKTFYPEEISSMVL 119

Query: 129 AKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAYG 188
            KM++IAE Y+G  V+NAV+TVPAYF DSQRQATKDAG +AGLNVL+II+EPTAAAIAYG
Sbjct: 120 TKMKEIAEAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 179

Query: 189 LDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQE 248
           LD+K   E+NVLIFDLGGGTFDVSLLTIE GIF+VKATAGDTHLGGEDFDNR+VNHF+QE
Sbjct: 180 LDKKGGGERNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVNHFVQE 239

Query: 249 FKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEE 308
           FKRK +KDISG+ RA++RLR  CERAKR LSS++Q +IEIDSL+EGIDF + +TRARFEE
Sbjct: 240 FKRKHKKDISGNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEE 299

Query: 309 LNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNIN 368
           L  DLFR  ++ V+  LR  K D S + D+V+VGGS RIPKVQ+LLQ+FFNGK L K+IN
Sbjct: 300 LCADLFRGTLEPVEKVLRDAKLDKSQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSIN 359

Query: 369 PDEAVAYGAAVQAAVLS 385
           PDEAVAYGAAVQAA+LS
Sbjct: 360 PDEAVAYGAAVQAAILS 376

This subfamily includes human HSPA1A (70-kDa heat shock protein 1A, also known as HSP72; HSPA1; HSP70I; HSPA1B; HSP70-1; HSP70-1A), HSPA1B (70-kDa heat shock protein 1B, also known as HSPA1A; HSP70-2; HSP70-1B), and HSPA1L (70-kDa heat shock protein 1-like, also known as HSP70T; hum70t; HSP70-1L; HSP70-HOM). The genes for these three HSPA1 proteins map in close proximity on the major histocompatibility complex (MHC) class III region on chromosome 6, 6p21.3. This subfamily also includes human HSPA8 (heat shock 70kDa protein 8, also known as LAP1; HSC54; HSC70; HSC71; HSP71; HSP73; NIP71; HSPA10; the HSPA8 gene maps to 11q24.1), human HSPA2 (70-kDa heat shock protein 2, also known as HSP70-2; HSP70-3, the HSPA2 gene maps to 14q24.1), human HSPA6 (also known as heat shock 70kDa protein 6 (HSP70B') gi 94717614, the HSPA6 gene maps to 1q23.3), human HSPA7 (heat shock 70kDa protein 7 , also known as HSP70B; the HSPA7 gene maps to 1q23.3) and Saccharmoyces cerevisiae Stress-Seventy subfamily B/Ssb1p. This subfamily belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Associations of polymorphisms within the MHC-III HSP70 gene locus with longevity, systemic lupus erythematosus, Meniere's disease, noise-induced hearing loss, high-altitude pulmonary edema, and coronary heart disease, have been found. HSPA2 is involved in cancer cell survival, is required for maturation of male gametophytes, and is linked to male infertility. The induction of HSPA6 is a biomarker of cellular stress. HSPA8 participates in the folding and trafficking of client proteins to different subcellular compartments, and in the signal transduction and apoptosis process; it has been shown to protect cardiomyocytes against oxidative stress partly through an interaction with alpha-enolase. S. cerevisiae Ssb1p, is part of the ribosome-associated complex (RAC), it acts as a chaperone for nascent polypeptides, and is important for translation fidelity; Ssb1p is also a [PSI+] prion-curing factor. Length = 376
>gnl|CDD|240227 PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional Back     alignment and domain information
>gnl|CDD|212681 cd10241, HSPA5-like_NBD, Nucleotide-binding domain of human HSPA5 and similar proteins Back     alignment and domain information
>gnl|CDD|215656 pfam00012, HSP70, Hsp70 protein Back     alignment and domain information
>gnl|CDD|212667 cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family Back     alignment and domain information
>gnl|CDD|234715 PRK00290, dnaK, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|212676 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding domain of human HSPA9 and similar proteins Back     alignment and domain information
>gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|233830 TIGR02350, prok_dnaK, chaperone protein DnaK Back     alignment and domain information
>gnl|CDD|212683 cd11733, HSPA9-like_NBD, Nucleotide-binding domain of human HSPA9, Escherichia coli DnaK, and similar proteins Back     alignment and domain information
>gnl|CDD|212684 cd11734, Ssq1_like_NBD, Nucleotide-binding domain of Saccharomyces cerevisiae Ssq1 and similar proteins Back     alignment and domain information
>gnl|CDD|184039 PRK13411, PRK13411, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|214360 CHL00094, dnaK, heat shock protein 70 Back     alignment and domain information
>gnl|CDD|212670 cd10228, HSPA4_like_NDB, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4 and similar proteins Back     alignment and domain information
>gnl|CDD|184038 PRK13410, PRK13410, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|240403 PTZ00400, PTZ00400, DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>gnl|CDD|215618 PLN03184, PLN03184, chloroplast Hsp70; Provisional Back     alignment and domain information
>gnl|CDD|212677 cd10235, HscC_like_NBD, Nucleotide-binding domain of Escherichia coli HscC and similar proteins Back     alignment and domain information
>gnl|CDD|235360 PRK05183, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|212678 cd10236, HscA_like_NBD, Nucleotide-binding domain of HscA and similar proteins Back     alignment and domain information
>gnl|CDD|140213 PTZ00186, PTZ00186, heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>gnl|CDD|212680 cd10238, HSPA14-like_NBD, Nucleotide-binding domain of human HSPA14 and similar proteins Back     alignment and domain information
>gnl|CDD|212679 cd10237, HSPA13-like_NBD, Nucleotide-binding domain of human HSPA13 and similar proteins Back     alignment and domain information
>gnl|CDD|233673 TIGR01991, HscA, Fe-S protein assembly chaperone HscA Back     alignment and domain information
>gnl|CDD|212672 cd10230, HYOU1-like_NBD, Nucleotide-binding domain of human HYOU1 and similar proteins Back     alignment and domain information
>gnl|CDD|212674 cd10232, ScSsz1p_like_NBD, Nucleotide-binding domain of Saccharmomyces cerevisiae Ssz1pp and similar proteins Back     alignment and domain information
>gnl|CDD|212682 cd11732, HSP105-110_like_NBD, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4, HYOU1, and similar proteins Back     alignment and domain information
>gnl|CDD|212687 cd11737, HSPA4_NBD, Nucleotide-binding domain of HSPA4 Back     alignment and domain information
>gnl|CDD|212689 cd11739, HSPH1_NBD, Nucleotide-binding domain of HSPH1 Back     alignment and domain information
>gnl|CDD|212688 cd11738, HSPA4L_NBD, Nucleotide-binding domain of HSPA4L Back     alignment and domain information
>gnl|CDD|234955 PRK01433, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|212673 cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins Back     alignment and domain information
>gnl|CDD|212671 cd10229, HSPA12_like_NBD, Nucleotide-binding domain of HSPA12A, HSPA12B and similar proteins Back     alignment and domain information
>gnl|CDD|212668 cd10225, MreB_like, MreB and similar proteins Back     alignment and domain information
>gnl|CDD|212669 cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins Back     alignment and domain information
>gnl|CDD|213718 TIGR02529, EutJ, ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>gnl|CDD|237564 PRK13930, PRK13930, rod shape-determining protein MreB; Provisional Back     alignment and domain information
>gnl|CDD|237563 PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>gnl|CDD|129982 TIGR00904, mreB, cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>gnl|CDD|115385 pfam06723, MreB_Mbl, MreB/Mbl protein Back     alignment and domain information
>gnl|CDD|227157 COG4820, EutJ, Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|224003 COG1077, MreB, Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|236954 PRK11678, PRK11678, putative chaperone; Provisional Back     alignment and domain information
>gnl|CDD|184403 PRK13929, PRK13929, rod-share determining protein MreBH; Provisional Back     alignment and domain information
>gnl|CDD|219497 pfam07649, C1_3, C1-like domain Back     alignment and domain information
>gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily Back     alignment and domain information
>gnl|CDD|237562 PRK13927, PRK13927, rod shape-determining protein MreB; Provisional Back     alignment and domain information
>gnl|CDD|198375 cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|233354 TIGR01312, XylB, D-xylulose kinase Back     alignment and domain information
>gnl|CDD|237904 PRK15080, PRK15080, ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>gnl|CDD|197633 smart00291, ZnF_ZZ, Zinc-binding domain, present in Dystrophin, CREB-binding protein Back     alignment and domain information
>gnl|CDD|223996 COG1070, XylB, Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 475
KOG0100 663 consensus Molecular chaperones GRP78/BiP/KAR2, HSP 100.0
KOG0102 640 consensus Molecular chaperones mortalin/PBP74/GRP7 100.0
PTZ00186 657 heat shock 70 kDa precursor protein; Provisional 100.0
PTZ00009 653 heat shock 70 kDa protein; Provisional 100.0
PRK13410 668 molecular chaperone DnaK; Provisional 100.0
PTZ00400 663 DnaK-type molecular chaperone; Provisional 100.0
PRK13411 653 molecular chaperone DnaK; Provisional 100.0
PLN03184 673 chloroplast Hsp70; Provisional 100.0
KOG0101 620 consensus Molecular chaperones HSP70/HSC70, HSP70 100.0
PRK00290 627 dnaK molecular chaperone DnaK; Provisional 100.0
TIGR01991 599 HscA Fe-S protein assembly chaperone HscA. The Hea 100.0
CHL00094 621 dnaK heat shock protein 70 100.0
COG0443 579 DnaK Molecular chaperone [Posttranslational modifi 100.0
TIGR02350 595 prok_dnaK chaperone protein DnaK. Members of this 100.0
PRK05183 616 hscA chaperone protein HscA; Provisional 100.0
PF00012 602 HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho 100.0
KOG0103 727 consensus Molecular chaperones HSP105/HSP110/SSE1, 100.0
PRK01433 595 hscA chaperone protein HscA; Provisional 100.0
KOG0104 902 consensus Molecular chaperones GRP170/SIL1, HSP70 100.0
PRK11678450 putative chaperone; Provisional 100.0
PRK13928336 rod shape-determining protein Mbl; Provisional 100.0
PRK13929335 rod-share determining protein MreBH; Provisional 100.0
PRK13927334 rod shape-determining protein MreB; Provisional 100.0
TIGR00904333 mreB cell shape determining protein, MreB/Mrl fami 100.0
PRK13930335 rod shape-determining protein MreB; Provisional 100.0
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 100.0
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 100.0
COG1077342 MreB Actin-like ATPase involved in cell morphogene 100.0
PRK15080267 ethanolamine utilization protein EutJ; Provisional 99.97
PRK09472420 ftsA cell division protein FtsA; Reviewed 99.94
TIGR01174371 ftsA cell division protein FtsA. This bacterial ce 99.94
COG0849418 ftsA Cell division ATPase FtsA [Cell division and 99.91
cd00012371 ACTIN Actin; An ubiquitous protein involved in the 99.81
smart00268373 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki 99.79
COG4820277 EutJ Ethanolamine utilization protein, possible ch 99.76
PTZ00280414 Actin-related protein 3; Provisional 99.73
PRK13917344 plasmid segregation protein ParM; Provisional 99.72
PF00022393 Actin: Actin; InterPro: IPR004000 Actin [, ] is a 99.64
PTZ00004378 actin-2; Provisional 99.64
PTZ00452375 actin; Provisional 99.64
PTZ00281376 actin; Provisional 99.63
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 99.61
PTZ00466380 actin-like protein; Provisional 99.6
TIGR03739320 PRTRC_D PRTRC system protein D. A novel genetic sy 99.6
PF11104340 PilM_2: Type IV pilus assembly protein PilM;; PDB: 99.57
PF06406318 StbA: StbA protein; InterPro: IPR009440 This entry 99.46
KOG0679426 consensus Actin-related protein - Arp4p/Act3p [Cyt 99.39
COG4972354 PilM Tfp pilus assembly protein, ATPase PilM [Cell 99.32
COG5277444 Actin and related proteins [Cytoskeleton] 99.29
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 99.27
PRK10719475 eutA reactivating factor for ethanolamine ammonia 99.15
TIGR03192293 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s 99.07
TIGR03286404 methan_mark_15 putative methanogenesis marker prot 99.05
TIGR02259432 benz_CoA_red_A benzoyl-CoA reductase, bcr type, su 98.95
TIGR02261262 benz_CoA_red_D benzoyl-CoA reductase, bcr type, su 98.94
COG1924396 Activator of 2-hydroxyglutaryl-CoA dehydratase (HS 98.94
KOG0676372 consensus Actin and related proteins [Cytoskeleton 98.92
PF0764930 C1_3: C1-like domain; InterPro: IPR011424 This sho 98.86
PF075201002 SrfB: Virulence factor SrfB; InterPro: IPR009216 T 98.69
PF08841332 DDR: Diol dehydratase reactivase ATPase-like domai 98.67
PRK13317277 pantothenate kinase; Provisional 98.63
PF0310730 C1_2: C1 domain; InterPro: IPR004146 This short do 98.47
PF06277473 EutA: Ethanolamine utilisation protein EutA; Inter 98.41
KOG0677389 consensus Actin-related protein Arp2/3 complex, su 98.29
KOG0680400 consensus Actin-related protein - Arp6p [Cytoskele 98.22
TIGR00555279 panK_eukar pantothenate kinase, eukaryotic/staphyl 97.94
COG1070502 XylB Sugar (pentulose and hexulose) kinases [Carbo 97.84
PF01869271 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In 97.84
cd0234043 ZZ_NBR1_like Zinc finger, ZZ type. Zinc finger pre 97.83
KOG0797618 consensus Actin-related protein [Cytoskeleton] 97.74
COG44571014 SrfB Uncharacterized protein conserved in bacteria 97.72
COG4819473 EutA Ethanolamine utilization protein, possible ch 97.49
PF02782198 FGGY_C: FGGY family of carbohydrate kinases, C-ter 97.35
KOG0681 645 consensus Actin-related protein - Arp5p [Cytoskele 97.13
PF14574412 DUF4445: Domain of unknown function (DUF4445); PDB 97.1
PRK11031496 guanosine pentaphosphate phosphohydrolase; Provisi 97.09
cd0233945 ZZ_Mind_bomb Zinc finger, ZZ type. Zinc finger pre 97.08
COG1069544 AraB Ribulose kinase [Energy production and conver 96.97
PRK15027484 xylulokinase; Provisional 96.96
TIGR01315541 5C_CHO_kinase FGGY-family pentulose kinase. This m 96.93
PF14450120 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B 96.86
PLN02669556 xylulokinase 96.78
TIGR00744318 ROK_glcA_fam ROK family protein (putative glucokin 96.77
PRK10854 513 exopolyphosphatase; Provisional 96.75
cd0224946 ZZ Zinc finger, ZZ type. Zinc finger present in dy 96.6
PRK04123548 ribulokinase; Provisional 96.55
PRK00047498 glpK glycerol kinase; Provisional 96.52
PTZ00294504 glycerol kinase-like protein; Provisional 96.47
PF13941457 MutL: MutL protein 96.42
TIGR03706300 exo_poly_only exopolyphosphatase. It appears that 96.41
TIGR01311493 glycerol_kin glycerol kinase. This model describes 96.41
TIGR02628465 fuculo_kin_coli L-fuculokinase. Members of this fa 96.4
TIGR01312481 XylB D-xylulose kinase. D-xylulose kinase (XylB) g 96.39
TIGR01234536 L-ribulokinase L-ribulokinase. This enzyme catalyz 96.39
COG0248492 GppA Exopolyphosphatase [Nucleotide transport and 96.38
PRK10331470 L-fuculokinase; Provisional 96.33
TIGR01314505 gntK_FGGY gluconate kinase, FGGY type. Gluconate i 96.27
PLN02295512 glycerol kinase 96.25
TIGR02627454 rhamnulo_kin rhamnulokinase. This model describes 96.15
PRK10939520 autoinducer-2 (AI-2) kinase; Provisional 96.07
KOG2517516 consensus Ribulose kinase and related carbohydrate 95.91
PRK09557301 fructokinase; Reviewed 95.82
PRK10640471 rhaB rhamnulokinase; Provisional 95.79
smart00842187 FtsA Cell division protein FtsA. FtsA is essential 95.7
KOG2531545 consensus Sugar (pentulose and hexulose) kinases [ 95.61
cd0234148 ZZ_ZZZ3 Zinc finger, ZZ type. Zinc finger present 95.61
PRK09698302 D-allose kinase; Provisional 95.54
PF0013053 C1_1: Phorbol esters/diacylglycerol binding domain 95.35
PTZ00288405 glucokinase 1; Provisional 95.21
PRK13310303 N-acetyl-D-glucosamine kinase; Provisional 94.86
KOG0681645 consensus Actin-related protein - Arp5p [Cytoskele 94.65
PF07318343 DUF1464: Protein of unknown function (DUF1464); In 94.56
PRK13321256 pantothenate kinase; Reviewed 94.55
PRK09604332 UGMP family protein; Validated 94.52
cd0233549 ZZ_ADA2 Zinc finger, ZZ type. Zinc finger present 94.49
PF02541285 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I 94.24
PRK09605 535 bifunctional UGMP family protein/serine/threonine 94.1
COG0533342 QRI7 Metal-dependent proteases with possible chape 93.96
COG1548330 Predicted transcriptional regulator/sugar kinase [ 93.93
TIGR03723314 bact_gcp putative glycoprotease GCP. This model re 93.79
cd0234445 ZZ_HERC2 Zinc finger, ZZ type. Zinc finger present 93.79
PLN02666 1275 5-oxoprolinase 93.76
PRK09585365 anmK anhydro-N-acetylmuramic acid kinase; Reviewed 93.66
PRK12408336 glucokinase; Provisional 93.43
cd0234243 ZZ_UBA_plant Zinc finger, ZZ type. Zinc finger pre 93.3
PTZ00340345 O-sialoglycoprotein endopeptidase-like protein; Pr 93.09
COG1940314 NagC Transcriptional regulator/sugar kinase [Trans 92.7
smart0029144 ZnF_ZZ Zinc-binding domain, present in Dystrophin, 92.67
PF02685316 Glucokinase: Glucokinase; InterPro: IPR003836 Gluc 92.49
PRK14101 638 bifunctional glucokinase/RpiR family transcription 92.47
PF08735254 DUF1786: Putative pyruvate format-lyase activating 92.3
cd0233849 ZZ_PCMF_like Zinc finger, ZZ type. Zinc finger pre 92.26
PRK00292316 glk glucokinase; Provisional 92.0
cd0002950 C1 Protein kinase C conserved region 1 (C1) . Cyst 91.96
COG2377371 Predicted molecular chaperone distantly related to 91.95
COG1521251 Pantothenate kinase type III (Bvg accessory factor 91.85
PF03702364 UPF0075: Uncharacterised protein family (UPF0075); 91.7
cd0233741 ZZ_CBP Zinc finger, ZZ type. Zinc finger present i 91.62
PTZ002971452 pantothenate kinase; Provisional 91.46
COG0554499 GlpK Glycerol kinase [Energy production and conver 91.27
PRK14878323 UGMP family protein; Provisional 91.2
cd0233449 ZZ_dystrophin Zinc finger, ZZ type. Zinc finger pr 90.92
PF0056946 ZZ: Zinc finger, ZZ type; InterPro: IPR000433 Zinc 90.87
PF14450120 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B 90.5
COG3426358 Butyrate kinase [Energy production and conversion] 90.23
KOG2708336 consensus Predicted metalloprotease with chaperone 90.19
PF02543360 CmcH_NodU: Carbamoyltransferase; InterPro: IPR0036 89.99
PF01968290 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPr 89.67
smart0010949 C1 Protein kinase C conserved region 1 (C1) domain 89.23
TIGR00329305 gcp_kae1 metallohydrolase, glycoprotease/Kae1 fami 89.05
TIGR03281326 methan_mark_12 putative methanogenesis marker prot 88.76
COG2192 555 Predicted carbamoyl transferase, NodU family [Post 88.59
COG5026466 Hexokinase [Carbohydrate transport and metabolism] 88.06
PLN02920398 pantothenate kinase 1 88.06
KOG0678415 consensus Actin-related protein Arp2/3 complex, su 87.39
cd0234348 ZZ_EF Zinc finger, ZZ type. Zinc finger present in 86.97
COG0837320 Glk Glucokinase [Carbohydrate transport and metabo 86.46
PRK00976326 hypothetical protein; Provisional 86.14
KOG4582278 consensus Uncharacterized conserved protein, conta 85.66
COG0145 674 HyuA N-methylhydantoinase A/acetone carboxylase, b 84.88
PRK03011358 butyrate kinase; Provisional 84.4
TIGR00143711 hypF [NiFe] hydrogenase maturation protein HypF. A 82.38
PF00370245 FGGY_N: FGGY family of carbohydrate kinases, N-ter 82.23
TIGR03722322 arch_KAE1 universal archaeal protein Kae1. This fa 82.2
KOG1385453 consensus Nucleoside phosphatase [Nucleotide trans 81.24
PLN02362509 hexokinase 80.79
>KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-97  Score=691.34  Aligned_cols=462  Identities=57%  Similarity=0.868  Sum_probs=434.2

Q ss_pred             CCCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEcCCcEEecHHHHHhhhhCCCceecccHHhhCCCCCChh
Q 041815            6 AAPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVS   85 (475)
Q Consensus         6 ~~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~   85 (475)
                      ...+||||||||||||+++++|++++|.|++|+|-+||.|+|.+.+|++|++|++|...||++++++.||++|+.|+++.
T Consensus        35 ~gtvigIdLGTTYsCVgV~kNgrvEIiANdQGNRItPSyVaFt~derLiGdAAKNQ~~~NPenTiFD~KRLIGr~~~d~~  114 (663)
T KOG0100|consen   35 LGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTDDERLIGDAAKNQLTSNPENTIFDAKRLIGRKFNDKS  114 (663)
T ss_pred             cceEEEEecCCceeeEEEEeCCeEEEEecCCCCccccceeeeccchhhhhhHhhcccccCcccceechHHHhCcccCChh
Confidence            56899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcccccCeEEEecCCCCceEEEeeC-CceeeeeHHHHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCCCCHHHHHHHHH
Q 041815           86 VQSDVKLWPFEVVAGPKDKPMIVVNCK-GEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKD  164 (475)
Q Consensus        86 v~~~~~~~~~~~~~~~~~~~~~~v~~~-g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~~~~~~r~~l~~  164 (475)
                      ++++++.+||+++ +.++++++.|... |+.+.++|+++++|+|.++++.|++++|..++++|+|||+||+++|||++++
T Consensus       115 vq~Dik~~Pfkvv-~k~~kp~i~v~v~~g~~K~FtPeEiSaMiL~KMKe~AEayLGkkv~~AVvTvPAYFNDAQrQATKD  193 (663)
T KOG0100|consen  115 VQKDIKFLPFKVV-NKDGKPYIQVKVGGGETKVFTPEEISAMILTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKD  193 (663)
T ss_pred             hhhhhhcCceEEE-cCCCCccEEEEccCCcccccCHHHHHHHHHHHHHHHHHHHhCCcccceEEecchhcchHHHhhhcc
Confidence            9999999999999 7799999999987 6688899999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHHH
Q 041815          165 AGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNH  244 (475)
Q Consensus       165 a~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~  244 (475)
                      |..+|||+++++|+||+|||++|++++... +.+++|+|+||||||+|++.+.+|.|+|++++++.++||.+||++++++
T Consensus       194 AGtIAgLnV~RIiNePTaAAIAYGLDKk~g-EknilVfDLGGGTFDVSlLtIdnGVFeVlaTnGDThLGGEDFD~rvm~~  272 (663)
T KOG0100|consen  194 AGTIAGLNVVRIINEPTAAAIAYGLDKKDG-EKNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRVMEY  272 (663)
T ss_pred             cceeccceEEEeecCccHHHHHhcccccCC-cceEEEEEcCCceEEEEEEEEcCceEEEEecCCCcccCccchHHHHHHH
Confidence            999999999999999999999999998775 8899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEeccccCccceEEEcHHHHHHHHHHHHHHHHHHHHHH
Q 041815          245 FIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMC  324 (475)
Q Consensus       245 l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~  324 (475)
                      +.+.|+++.+.+++.+.+++++|++++|+||+.||+..++.++|+++++|.|++-.+||+.||++--+++.....+++++
T Consensus       273 fiklykkK~gkDv~kdnkA~~KLrRe~EkAKRaLSsqhq~riEIeS~fdG~DfSEtLtRAkFEElNmDLFr~TlkPv~kv  352 (663)
T KOG0100|consen  273 FIKLYKKKHGKDVRKDNKAVQKLRREVEKAKRALSSQHQVRIEIESLFDGVDFSETLTRAKFEELNMDLFRKTLKPVQKV  352 (663)
T ss_pred             HHHHHhhhcCCccchhhHHHHHHHHHHHHHHhhhccccceEEeeeeccccccccchhhhhHHHHhhhHHHHHhhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcCCCCCcccceEEEecccCC
Q 041815          325 LRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVNPNY  404 (475)
Q Consensus       325 l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~~~~~~~~~~~~~d~~p~~  404 (475)
                      |++++++..+|+.|+||||++|||.||+.|+++|+|+++...+||+||||+|||.+|+.|||+.  .+.+++++||+|++
T Consensus       353 l~Ds~lkKsdideiVLVGGsTrIPKvQqllk~fF~GKepskGinPdEAVAYGAAVQaGvlsGee--~t~divLLDv~pLt  430 (663)
T KOG0100|consen  353 LEDSDLKKSDIDEIVLVGGSTRIPKVQQLLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSGEE--DTGDIVLLDVNPLT  430 (663)
T ss_pred             HhhcCcccccCceEEEecCcccChhHHHHHHHHhCCCCccCCCChHHHHHhhhhhhhccccccc--CcCcEEEEeecccc
Confidence            9999999999999999999999999999999999999999999999999999999999999974  48999999999999


Q ss_pred             CCccc----------ccccccc-cccCC-CCCCCCCccccccce-----eccCcccccccccCCCCCCceeecccCCCCC
Q 041815          405 NSPLE----------LKTTTSF-AAQNL-PSRGGHKSHQAHDLQ-----LKNHKTLSKCNGCKRPAFGLMYRCELCNFNL  467 (475)
Q Consensus       405 ~~~~~----------~~~~~~~-~~~~~-~~~~~~~~~~~h~l~-----~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~  467 (475)
                      .|+..          -++..|. ++|.+ ++.++|+...+.++.     .++|..|++||+.++|-+++.-+..+..|.+
T Consensus       431 lGIETvGGVMTklI~RNTviPTkKSQvFsTa~DnQ~tV~I~vyEGER~mtkdn~lLGkFdltGipPAPRGvpqIEVtFev  510 (663)
T KOG0100|consen  431 LGIETVGGVMTKLIPRNTVIPTKKSQVFSTAQDNQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEV  510 (663)
T ss_pred             ceeeeecceeeccccCCcccCccccceeeecccCCceEEEEEeeccccccccccccccccccCCCCCCCCCccEEEEEEE
Confidence            77532          2233333 34544 677888777776665     5567788999999999999999999998887


Q ss_pred             CcCC
Q 041815          468 HIPC  471 (475)
Q Consensus       468 ~~~~  471 (475)
                      +.+-
T Consensus       511 Dang  514 (663)
T KOG0100|consen  511 DANG  514 (663)
T ss_pred             ccCc
Confidence            7653

>KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00186 heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>PTZ00009 heat shock 70 kDa protein; Provisional Back     alignment and domain information
>PRK13410 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PTZ00400 DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>PRK13411 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PLN03184 chloroplast Hsp70; Provisional Back     alignment and domain information
>KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK00290 dnaK molecular chaperone DnaK; Provisional Back     alignment and domain information
>TIGR01991 HscA Fe-S protein assembly chaperone HscA Back     alignment and domain information
>CHL00094 dnaK heat shock protein 70 Back     alignment and domain information
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02350 prok_dnaK chaperone protein DnaK Back     alignment and domain information
>PRK05183 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins Back     alignment and domain information
>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK01433 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK11678 putative chaperone; Provisional Back     alignment and domain information
>PRK13928 rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>PRK09472 ftsA cell division protein FtsA; Reviewed Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton Back     alignment and domain information
>smart00268 ACTIN Actin Back     alignment and domain information
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00280 Actin-related protein 3; Provisional Back     alignment and domain information
>PRK13917 plasmid segregation protein ParM; Provisional Back     alignment and domain information
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton Back     alignment and domain information
>PTZ00004 actin-2; Provisional Back     alignment and domain information
>PTZ00452 actin; Provisional Back     alignment and domain information
>PTZ00281 actin; Provisional Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>PTZ00466 actin-like protein; Provisional Back     alignment and domain information
>TIGR03739 PRTRC_D PRTRC system protein D Back     alignment and domain information
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A Back     alignment and domain information
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA [] Back     alignment and domain information
>KOG0679 consensus Actin-related protein - Arp4p/Act3p [Cytoskeleton] Back     alignment and domain information
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>COG5277 Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional Back     alignment and domain information
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit Back     alignment and domain information
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 Back     alignment and domain information
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A Back     alignment and domain information
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D Back     alignment and domain information
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] Back     alignment and domain information
>KOG0676 consensus Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>PF07649 C1_3: C1-like domain; InterPro: IPR011424 This short domain is rich in cysteines and histidines Back     alignment and domain information
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function Back     alignment and domain information
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ] Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>PF03107 C1_2: C1 domain; InterPro: IPR004146 This short domain is rich in cysteines and histidines Back     alignment and domain information
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon Back     alignment and domain information
>KOG0677 consensus Actin-related protein Arp2/3 complex, subunit Arp2 [Cytoskeleton] Back     alignment and domain information
>KOG0680 consensus Actin-related protein - Arp6p [Cytoskeleton] Back     alignment and domain information
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis Back     alignment and domain information
>cd02340 ZZ_NBR1_like Zinc finger, ZZ type Back     alignment and domain information
>KOG0797 consensus Actin-related protein [Cytoskeleton] Back     alignment and domain information
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown] Back     alignment and domain information
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism] Back     alignment and domain information
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] Back     alignment and domain information
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X Back     alignment and domain information
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional Back     alignment and domain information
>cd02339 ZZ_Mind_bomb Zinc finger, ZZ type Back     alignment and domain information
>COG1069 AraB Ribulose kinase [Energy production and conversion] Back     alignment and domain information
>PRK15027 xylulokinase; Provisional Back     alignment and domain information
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase Back     alignment and domain information
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T Back     alignment and domain information
>PLN02669 xylulokinase Back     alignment and domain information
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase) Back     alignment and domain information
>PRK10854 exopolyphosphatase; Provisional Back     alignment and domain information
>cd02249 ZZ Zinc finger, ZZ type Back     alignment and domain information
>PRK04123 ribulokinase; Provisional Back     alignment and domain information
>PRK00047 glpK glycerol kinase; Provisional Back     alignment and domain information
>PTZ00294 glycerol kinase-like protein; Provisional Back     alignment and domain information
>PF13941 MutL: MutL protein Back     alignment and domain information
>TIGR03706 exo_poly_only exopolyphosphatase Back     alignment and domain information
>TIGR01311 glycerol_kin glycerol kinase Back     alignment and domain information
>TIGR02628 fuculo_kin_coli L-fuculokinase Back     alignment and domain information
>TIGR01312 XylB D-xylulose kinase Back     alignment and domain information
>TIGR01234 L-ribulokinase L-ribulokinase Back     alignment and domain information
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10331 L-fuculokinase; Provisional Back     alignment and domain information
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type Back     alignment and domain information
>PLN02295 glycerol kinase Back     alignment and domain information
>TIGR02627 rhamnulo_kin rhamnulokinase Back     alignment and domain information
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional Back     alignment and domain information
>KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09557 fructokinase; Reviewed Back     alignment and domain information
>PRK10640 rhaB rhamnulokinase; Provisional Back     alignment and domain information
>smart00842 FtsA Cell division protein FtsA Back     alignment and domain information
>KOG2531 consensus Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02341 ZZ_ZZZ3 Zinc finger, ZZ type Back     alignment and domain information
>PRK09698 D-allose kinase; Provisional Back     alignment and domain information
>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger Back     alignment and domain information
>PTZ00288 glucokinase 1; Provisional Back     alignment and domain information
>PRK13310 N-acetyl-D-glucosamine kinase; Provisional Back     alignment and domain information
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] Back     alignment and domain information
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length Back     alignment and domain information
>PRK13321 pantothenate kinase; Reviewed Back     alignment and domain information
>PRK09604 UGMP family protein; Validated Back     alignment and domain information
>cd02335 ZZ_ADA2 Zinc finger, ZZ type Back     alignment and domain information
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3 Back     alignment and domain information
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated Back     alignment and domain information
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03723 bact_gcp putative glycoprotease GCP Back     alignment and domain information
>cd02344 ZZ_HERC2 Zinc finger, ZZ type Back     alignment and domain information
>PLN02666 5-oxoprolinase Back     alignment and domain information
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed Back     alignment and domain information
>PRK12408 glucokinase; Provisional Back     alignment and domain information
>cd02342 ZZ_UBA_plant Zinc finger, ZZ type Back     alignment and domain information
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional Back     alignment and domain information
>COG1940 NagC Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00291 ZnF_ZZ Zinc-binding domain, present in Dystrophin, CREB-binding protein Back     alignment and domain information
>PF02685 Glucokinase: Glucokinase; InterPro: IPR003836 Glucokinases 2 Back     alignment and domain information
>PRK14101 bifunctional glucokinase/RpiR family transcriptional regulator; Provisional Back     alignment and domain information
>PF08735 DUF1786: Putative pyruvate format-lyase activating enzyme (DUF1786); InterPro: IPR014846 This family is annotated as pyruvate formate-lyase activating enzyme (1 Back     alignment and domain information
>cd02338 ZZ_PCMF_like Zinc finger, ZZ type Back     alignment and domain information
>PRK00292 glk glucokinase; Provisional Back     alignment and domain information
>cd00029 C1 Protein kinase C conserved region 1 (C1) Back     alignment and domain information
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1521 Pantothenate kinase type III (Bvg accessory factor family protein) [Transcription] Back     alignment and domain information
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P Back     alignment and domain information
>cd02337 ZZ_CBP Zinc finger, ZZ type Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>COG0554 GlpK Glycerol kinase [Energy production and conversion] Back     alignment and domain information
>PRK14878 UGMP family protein; Provisional Back     alignment and domain information
>cd02334 ZZ_dystrophin Zinc finger, ZZ type Back     alignment and domain information
>PF00569 ZZ: Zinc finger, ZZ type; InterPro: IPR000433 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T Back     alignment and domain information
>COG3426 Butyrate kinase [Energy production and conversion] Back     alignment and domain information
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors [] Back     alignment and domain information
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3 Back     alignment and domain information
>smart00109 C1 Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) Back     alignment and domain information
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family Back     alignment and domain information
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12 Back     alignment and domain information
>COG2192 Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG5026 Hexokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02920 pantothenate kinase 1 Back     alignment and domain information
>KOG0678 consensus Actin-related protein Arp2/3 complex, subunit Arp3 [Cytoskeleton] Back     alignment and domain information
>cd02343 ZZ_EF Zinc finger, ZZ type Back     alignment and domain information
>COG0837 Glk Glucokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK00976 hypothetical protein; Provisional Back     alignment and domain information
>KOG4582 consensus Uncharacterized conserved protein, contains ZZ-type Zn-finger [General function prediction only] Back     alignment and domain information
>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK03011 butyrate kinase; Provisional Back     alignment and domain information
>TIGR00143 hypF [NiFe] hydrogenase maturation protein HypF Back     alignment and domain information
>PF00370 FGGY_N: FGGY family of carbohydrate kinases, N-terminal domain; InterPro: IPR018484 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>TIGR03722 arch_KAE1 universal archaeal protein Kae1 Back     alignment and domain information
>KOG1385 consensus Nucleoside phosphatase [Nucleotide transport and metabolism] Back     alignment and domain information
>PLN02362 hexokinase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query475
3c7n_B554 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 1e-159
1yuw_A554 Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214 1e-158
2v7z_A543 Crystal Structure Of The 70-Kda Heat Shock Cognate 1e-157
2qw9_B394 Crystal Structure Of Bovine Hsc70 (1-394aa)in The A 1e-156
2qwn_A394 Crystal Structure Of Disulfide-Bond-Crosslinked Com 1e-155
1hpm_A386 How Potassium Affects The Activity Of The Molecular 1e-154
1ngb_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-153
1bup_A386 T13s Mutant Of Bovine 70 Kilodalton Heat Shock Prot 1e-153
1ngd_A386 Structural Basis Of The 70-kilodalton Heat Shock Co 1e-153
1ngf_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-153
1ngh_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-153
1ngg_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-153
1ngc_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-153
1nge_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-153
1nga_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-153
1atr_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 1e-153
1ats_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 1e-153
1ba0_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 1e-153
1ba1_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 1e-153
3cqx_A386 Chaperone Complex Length = 386 1e-152
1hx1_A400 Crystal Structure Of A Bag Domain In Complex With T 1e-152
3fzf_A381 Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP 1e-152
1kaz_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71e 1e-152
3a8y_A392 Crystal Structure Of The Complex Between The Bag5 B 1e-151
2e8a_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 1e-151
2e88_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 1e-151
1kay_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71a 1e-151
1kax_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71m 1e-151
2bup_A381 T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 1e-151
3jxu_A409 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-151
1qqo_A378 E175s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-151
1hjo_A380 Atpase Domain Of Human Heat Shock 70kda Protein 1 L 1e-150
3d2f_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 1e-150
1s3x_A382 The Crystal Structure Of The Human Hsp70 Atpase Dom 1e-150
1qqm_A378 D199s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-150
3d2e_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70, 1e-148
1qqn_A378 D206s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-148
3i33_A404 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-148
3gdq_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-147
3fe1_A403 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-146
3kvg_A400 Crystal Structure Of The N-Terminal Domain Of Hsp70 1e-146
4fsv_A387 Crystal Structure Of A Heat Shock 70kda Protein 2 ( 1e-145
3ldl_A384 Crystal Structure Of Human Grp78 (70kda Heat Shock 1e-129
3iuc_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-128
3qfp_A390 Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE D 1e-124
3qfu_A394 Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXE 1e-124
3gl1_A387 Crystal Structure Of Atpase Domain Of Ssb1 Chaperon 1e-123
2kho_A 605 Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAP 4e-88
4b9q_A 605 Open Conformation Of Atp-Bound Hsp70 Homolog Dnak L 2e-85
1dkg_D383 Crystal Structure Of The Nucleotide Exchange Factor 1e-84
2v7y_A509 Crystal Structure Of The Molecular Chaperone Dnak F 1e-78
1xqs_C191 Crystal Structure Of The Hspbp1 Core Domain Complex 7e-66
2qxl_A 658 Crystal Structure Analysis Of Sse1, A Yeast Hsp110 7e-49
3c7n_A 668 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 7e-49
3d2f_A 675 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 7e-49
3d2e_A 675 Crystal Structure Of A Complex Of Sse1p And Hsp70, 1e-47
4gni_A409 Structure Of The Ssz1 Atpase Bound To Atp And Magne 5e-43
1jcf_A344 Mreb From Thermotoga Maritima, Trigonal Length = 34 8e-07
1jce_A344 Mreb From Thermotoga Maritima Length = 344 2e-06
3h1q_A272 Crystal Structure Of Ethanolamine Utilization Prote 8e-04
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 554 Back     alignment and structure 
Iteration: 1

 Score =  557 bits (1435), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 273/398 (68%), Positives = 316/398 (79%), Gaps = 5/398 (1%)
Query: 7   APAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNP 66
            PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD E  +GDAAKNQVAMNP
Sbjct: 4   GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 63
Query: 67  TNTVFDAKRLIGRRFGDVSVQSDVKLWPFEVV--AGPKDKPMIVVNCKGEEKRYAAEEIS 124
           TNTVFDAKRLIGRRF D  VQSD+K WPF VV  AG   +P + V  KGE K +  EE+S
Sbjct: 64  TNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG---RPKVQVEYKGETKSFYPEEVS 120
Query: 125 SMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAA 184
           SMVL KM++IAE Y+G  V+NAVVTVPAYF DSQRQATKDAG +AGLNVL+II+EPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 185 IAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNH 244
           IAYGLD+K  +E+NVLIFDLGGGTFDVS+LTIE GIF+VK+TAGDTHLGGEDFDNRMVNH
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 240
Query: 245 FIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRA 304
           FI EFKRK +KDIS + RAV+RLR  CERAKR LSS++Q +IEIDSLYEGIDF + +TRA
Sbjct: 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 300
Query: 305 RFEELNMDLFRKCIKHVDMCLRTGKTDNXXXXXXXXXXXXARIPKVQQLLQEFFNGKRLC 364
           RFEELN DLFR  +  V+  LR  K D              RIPK+Q+LLQ+FFNGK L 
Sbjct: 301 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELN 360
Query: 365 KNINPDEXXXXXXXXXXXXLSGNRSDKVEDIVILDVNP 402
           K+INPDE            LSG++S+ V+D+++LDV P
Sbjct: 361 KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A MUTANT Length = 554 Back     alignment and structure
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein From Rattus Norvegicus In Post-Atp Hydrolysis State Length = 543 Back     alignment and structure
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 394 Back     alignment and structure
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular Chaperone Hsc70. Ii. Potassium Binds Specifically In The Atpase Active Site Length = 386 Back     alignment and structure
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 386 Back     alignment and structure
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal 1nge 3 Length = 386 Back     alignment and structure
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal Mutant With Cys 17 Replaced By Lys Length = 386 Back     alignment and structure
>pdb|3CQX|A Chain A, Chaperone Complex Length = 386 Back     alignment and structure
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The Hsc70 Atpase Domain Length = 400 Back     alignment and structure
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP Length = 381 Back     alignment and structure
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant Length = 381 Back     alignment and structure
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And Hsp70 Nbd Length = 392 Back     alignment and structure
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In Complex With Amp-Pnp Length = 391 Back     alignment and structure
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The Apo Form Length = 391 Back     alignment and structure
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant Length = 381 Back     alignment and structure
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant Length = 381 Back     alignment and structure
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 Length = 381 Back     alignment and structure
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a (Hsp70-1) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 409 Back     alignment and structure
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1 Length = 380 Back     alignment and structure
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 382 Back     alignment and structure
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain Length = 382 Back     alignment and structure
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 382 Back     alignment and structure
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2 (Hsp70-2) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 404 Back     alignment and structure
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1-Like Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 408 Back     alignment and structure
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6 (Hsp70b') Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 403 Back     alignment and structure
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 (Cgd2_20) From Cryptosporidium Parvum In Complex With Amppnp Length = 400 Back     alignment and structure
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2) From Homo Sapiens At 1.80 A Resolution Length = 387 Back     alignment and structure
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5 BIP) Atpase Domain In Complex With Atp Length = 384 Back     alignment and structure
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5 (BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP Length = 408 Back     alignment and structure
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN Length = 390 Back     alignment and structure
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A Member Of The Hsp70 Family, From Saccharomyces Cerevisiae Length = 387 Back     alignment and structure
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE (1-605) Complexed With Adp And Substrate Length = 605 Back     alignment and structure
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak Length = 605 Back     alignment and structure
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 383 Back     alignment and structure
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis State Length = 509 Back     alignment and structure
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With The Fragment Of Hsp70 Atpase Domain Length = 191 Back     alignment and structure
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110 Length = 658 Back     alignment and structure
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 668 Back     alignment and structure
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 675 Back     alignment and structure
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 675 Back     alignment and structure
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium Length = 409 Back     alignment and structure
>pdb|1JCF|A Chain A, Mreb From Thermotoga Maritima, Trigonal Length = 344 Back     alignment and structure
>pdb|1JCE|A Chain A, Mreb From Thermotoga Maritima Length = 344 Back     alignment and structure
>pdb|3H1Q|A Chain A, Crystal Structure Of Ethanolamine Utilization Protein Eutj From Carboxydothermus Hydrogenoformans Length = 272 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query475
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 0.0
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 0.0
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 0.0
3d2f_A 675 Heat shock protein homolog SSE1; nucleotide exchan 0.0
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 1e-174
2kho_A 605 Heat shock protein 70; molecular chaperone, HSP70, 1e-172
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 1e-159
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 5e-28
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 4e-23
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 5e-23
3js6_A355 Uncharacterized PARM protein; partition, segregati 1e-14
1v5n_A89 PDI-like hypothetical protein AT1G60420; DC1 domai 9e-14
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 2e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 6e-09
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 2e-06
1y8f_A66 UNC-13 homolog A, MUNC13-1; cysteine-rich domain, 1e-05
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 1e-05
2row_A84 RHO-associated protein kinase 2; ATP-binding, coil 1e-05
2db6_A74 SH3 and cysteine rich domain 3; STAC3, C1 domain, 5e-05
1ptq_A50 Protein kinase C delta type; phosphotransferase; 1 7e-05
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 1e-04
2enz_A65 NPKC-theta, protein kinase C theta type; zinc bind 2e-04
2eli_A85 Protein kinase C alpha type; PKC-alpha, PKC-A, str 3e-04
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Length = 554 Back     alignment and structure
 Score =  819 bits (2118), Expect = 0.0
 Identities = 288/396 (72%), Positives = 335/396 (84%), Gaps = 1/396 (0%)

Query: 7   APAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNP 66
            PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD E  +GDAAKNQVAMNP
Sbjct: 4   GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 63

Query: 67  TNTVFDAKRLIGRRFGDVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSM 126
           TNTVFDAKRLIGRRF D  VQSD+K WPF VV     +P + V  KGE K +  EE+SSM
Sbjct: 64  TNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDA-GRPKVQVEYKGETKSFYPEEVSSM 122

Query: 127 VLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIA 186
           VL KM++IAE Y+G  V+NAVVTVPAYF DSQRQATKDAG +AGLNVL+II+EPTAAAIA
Sbjct: 123 VLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIA 182

Query: 187 YGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFI 246
           YGLD+K  +E+NVLIFDLGGGTFDVS+LTI  GIF+VK+TAGDTHLGGEDFDNRMVNHFI
Sbjct: 183 YGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFI 242

Query: 247 QEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARF 306
            EFKRK +KDIS + RAV+RLR  CERAKR LSS++Q +IEIDSLYEGIDF + +TRARF
Sbjct: 243 AEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARF 302

Query: 307 EELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKN 366
           EELN DLFR  +  V+  LR  K D S + D+V+VGGS RIPK+Q+LLQ+FFNGK L K+
Sbjct: 303 EELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKS 362

Query: 367 INPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVNP 402
           INPDEAVAYGAAVQAA+LSG++S+ V+D+++LDV P
Sbjct: 363 INPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* 1ngf_A* ... Length = 404 Back     alignment and structure
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Length = 675 Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Length = 383 Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Length = 605 Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Length = 509 Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Length = 272 Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Length = 346 Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Length = 320 Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Length = 355 Back     alignment and structure
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3 Length = 89 Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Length = 329 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Length = 377 Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Length = 419 Back     alignment and structure
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus} Length = 66 Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Length = 344 Back     alignment and structure
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus} Length = 84 Back     alignment and structure
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 74 Back     alignment and structure
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A* Length = 50 Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Length = 515 Back     alignment and structure
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens} Length = 65 Back     alignment and structure
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 85 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query475
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 100.0
4b9q_A 605 Chaperone protein DNAK; HET: ATP; 2.40A {Escherich 100.0
3d2f_A 675 Heat shock protein homolog SSE1; nucleotide exchan 100.0
2kho_A 605 Heat shock protein 70; molecular chaperone, HSP70, 100.0
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 100.0
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 100.0
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 100.0
4gni_A409 Putative heat shock protein; HSP70-type ATPase, AT 100.0
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 100.0
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 100.0
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 99.96
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 99.96
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 99.96
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 99.96
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 99.96
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 99.95
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 99.91
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 99.87
4ehu_A276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 99.82
3js6_A355 Uncharacterized PARM protein; partition, segregati 99.81
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 99.75
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 99.71
3qb0_A498 Actin-related protein 4; actin fold, ATP binding, 99.69
4fo0_A593 Actin-related protein 8; chromatin remodeling, nuc 99.55
2d0o_A610 DIOL dehydratase-reactivating factor large subunit 99.51
1nbw_A607 Glycerol dehydratase reactivase alpha subunit; mol 99.49
1v5n_A89 PDI-like hypothetical protein AT1G60420; DC1 domai 99.33
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 99.06
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 98.71
4am6_A 655 Actin-like protein ARP8; nuclear protein, chromati 98.27
3mdq_A315 Exopolyphosphatase; structural genomics, joint cen 97.71
2e2o_A299 Hexokinase; acetate and sugar kinases, HSP70, acti 97.66
1t6c_A315 Exopolyphosphatase; alpha/beta protein, actin-like 97.58
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 97.56
2ivn_A330 O-sialoglycoprotein endopeptidase; UP1 keops compl 97.47
3vgl_A321 Glucokinase; ROK family, transferase; HET: BGC ANP 97.42
3r8e_A321 Hypothetical sugar kinase; ribonuclease H-like mot 97.42
2ch5_A347 NAGK protein; transferase, N-acetylglucosamine, gl 97.37
4db3_A327 Glcnac kinase, N-acetyl-D-glucosamine kinase; stru 97.32
3vov_A302 Glucokinase, hexokinase; ROK, sugar kinase, transf 97.21
3l0q_A554 Xylulose kinase; xlylulose kinase, SGX, PSI, struc 97.12
3cer_A343 Possible exopolyphosphatase-like protein; NESG, BL 97.08
2qm1_A326 Glucokinase; alpha-beta structure, putative helix- 97.02
2gup_A292 ROK family protein; sugar kinase, streptococcus pn 96.95
2itm_A484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 96.95
4htl_A297 Beta-glucoside kinase; structural genomics, sugar 96.94
4bc3_A538 Xylulose kinase; transferase, glucuronate xyluloki 96.91
3ll3_A504 Gluconate kinase; xylulose kinase, nysgx, ATP, ADP 96.91
2zf5_O497 Glycerol kinase; hyperthermophilic archaeon, ATP-b 96.86
3hz6_A511 Xylulokinase; xylulose, structural genomic, chromo 96.8
3eno_A334 Putative O-sialoglycoprotein endopeptidase; hydrol 96.77
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 96.77
1u6z_A 513 Exopolyphosphatase; alpha/beta protein, askha (ace 96.76
3g25_A501 Glycerol kinase; IDP00743, ATP-binding, glycerol m 96.7
3ezw_A526 Glycerol kinase; glycerol metabolism, allosteric r 96.65
3jvp_A572 Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su 96.62
4e1j_A520 Glycerol kinase; structural genomics, PSI-biology, 96.59
2p3r_A510 Glycerol kinase; glycerol metabolism, allosteric r 96.59
3h3n_X506 Glycerol kinase; ATP-binding, glycerol metabolism, 96.58
3ifr_A508 Carbohydrate kinase, FGGY; xylulose kinase, SGX, s 96.54
2dpn_A495 Glycerol kinase; thermus thermophilus HB8, structu 96.51
2ap1_A327 Putative regulator protein; zinc binding protein, 96.48
1z6r_A406 MLC protein; transcriptional repressor, ROK family 96.48
2d4w_A504 Glycerol kinase; alpha and beta protein, ribonucle 96.36
3en9_A 540 Glycoprotease, O-sialoglycoprotein endopeptidase/p 96.33
2aa4_A289 Mannac kinase, putative N-acetylmannosamine kinase 96.29
1z05_A429 Transcriptional regulator, ROK family; structural 96.25
2w40_A503 Glycerol kinase, putative; closed conformation, ma 96.23
1zc6_A305 Probable N-acetylglucosamine kinase; NESG, Q7NU07_ 96.07
3htv_A310 D-allose kinase, allokinase; NP_418508.1, structur 96.05
1zbs_A291 Hypothetical protein PG1100; alpha-beta protein., 95.86
2hoe_A380 N-acetylglucosamine kinase; TM1224, structural gen 95.84
2yhw_A343 Bifunctional UDP-N-acetylglucosamine 2-epimerase/N 95.65
2uyt_A489 Rhamnulokinase; rhamnose degradation, IN-LINE phos 95.63
1sz2_A332 Glucokinase, glucose kinase; ATP-dependent, glucos 95.27
3h6e_A482 Carbohydrate kinase, FGGY; novosphingobium aromati 95.06
3cet_A334 Conserved archaeal protein; Q6M145, MRR63, NESG, X 94.59
1faq_A52 RAF-1; transferase, serine/threonine-protein kinas 94.4
4b6d_A61 RAC GTPase-activating protein 1; signaling protein 94.28
3zyy_X631 Iron-sulfur cluster binding protein; iron-sulfur-b 94.09
1tot_A52 CREB-binding protein; zinc binding, CBP, TAZ2, tra 93.99
2db6_A74 SH3 and cysteine rich domain 3; STAC3, C1 domain, 93.92
1ptq_A50 Protein kinase C delta type; phosphotransferase; 1 93.91
1kbe_A49 Kinase suppressor of RAS; KSR, cysteine-rich domai 93.86
2enz_A65 NPKC-theta, protein kinase C theta type; zinc bind 93.75
2eli_A85 Protein kinase C alpha type; PKC-alpha, PKC-A, str 93.68
2row_A84 RHO-associated protein kinase 2; ATP-binding, coil 93.67
2yuu_A83 NPKC-delta, protein kinase C delta type; metal bin 93.55
2e5r_A63 Dystrobrevin alpha; ZZ domain, structural genomics 93.29
2fnf_X72 Putative RAS effector NORE1; zinc, signal transduc 93.27
4e81_A 219 Chaperone protein DNAK; chaperone; 1.90A {Escheric 93.27
3ven_A 576 O-carbamoyltransferase TOBZ; antibiotic biosynthes 93.13
2dip_A98 Zinc finger SWIM domain-containing protein 2; ZZ d 93.04
1q5l_A135 Chaperone protein DNAK; HSP70, chaperone, heat sho 93.03
3bex_A249 Type III pantothenate kinase; actin-like fold, ATP 92.96
1y8f_A66 UNC-13 homolog A, MUNC13-1; cysteine-rich domain, 92.9
3uej_A65 NPKC-delta, protein kinase C delta type; proteine 92.84
1rfh_A59 RAS association (ralgds/AF-6) domain family 5; zin 92.01
3hi0_A508 Putative exopolyphosphatase; 17739545, structural 91.73
3n8e_A182 Stress-70 protein, mitochondrial; beta-sandwich, h 91.33
2enn_A77 NPKC-theta, protein kinase C theta type; zinc bind 91.19
3epq_A302 Putative fructokinase; SCRK, ADP binding, PSI2, MC 91.04
3dob_A152 Heat shock 70 kDa protein F44E5.5; structural geno 91.02
2yhx_A457 Hexokinase B; transferase(phosphoryl,alcohol accep 90.71
2fc7_A82 ZZZ3 protein; structure genomics, ZZ domain, struc 90.34
3h0x_A152 78 kDa glucose-regulated protein homolog; structur 90.27
3dqg_A151 Heat shock 70 kDa protein F; structural genomics, 90.01
3o8m_A485 Hexokinase; rnaseh-like fold, glycolysis, glucose 89.88
3qbx_A371 Anhydro-N-acetylmuramic acid kinase; acetate and s 89.63
1woq_A267 Inorganic polyphosphate/ATP-glucomannokinase; tran 89.07
3ttc_A657 HYPF, transcriptional regulatory protein; Zn finge 88.02
3ifr_A508 Carbohydrate kinase, FGGY; xylulose kinase, SGX, s 87.59
3cqy_A370 Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1 86.29
4g9i_A772 Hydrogenase maturation protein HYPF; zinc finger, 86.28
2op6_A152 Heat shock 70 kDa protein D; HSP70/peptide-binding 85.76
3mcp_A366 Glucokinase; structural genomics, joint center for 85.03
1u00_A 227 HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A 83.05
3vth_A761 Hydrogenase maturation factor; carbamoyltransfer, 82.71
3h6e_A482 Carbohydrate kinase, FGGY; novosphingobium aromati 82.36
1bdg_A451 Hexokinase; phosphotransferase; HET: GLC; 2.60A {S 81.78
2e1z_A415 Propionate kinase; TDCD, native, acetate kinase, n 80.97
1cza_N917 Hexokinase type I; structurally homologous domains 80.5
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 80.28
3l0q_A554 Xylulose kinase; xlylulose kinase, SGX, PSI, struc 80.08
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
Probab=100.00  E-value=3.2e-76  Score=616.12  Aligned_cols=463  Identities=64%  Similarity=0.951  Sum_probs=413.1

Q ss_pred             CCCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEcCCcEEecHHHHHhhhhCCCceecccHHhhCCCCCChh
Q 041815            6 AAPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVS   85 (475)
Q Consensus         6 ~~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~   85 (475)
                      |+.+||||||||||+||++.+|.++++.|++|++++||+|+|.+++++||+.|+.+...+|+++++++||++|+.++++.
T Consensus         3 m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~   82 (554)
T 1yuw_A            3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAV   82 (554)
T ss_dssp             SCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSH
T ss_pred             CCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHH
Confidence            45799999999999999999999999999999999999999999899999999999999999999999999999999999


Q ss_pred             hhhcccccCeEEEecCCCCceEEEeeCCceeeeeHHHHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 041815           86 VQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDA  165 (475)
Q Consensus        86 v~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~~~~~~r~~l~~a  165 (475)
                      ++...+.+||.++. .++.+.+.+.+.+..+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|
T Consensus        83 v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A  161 (554)
T 1yuw_A           83 VQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDA  161 (554)
T ss_dssp             HHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred             HHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            99999999999884 47888888888888788999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHHHH
Q 041815          166 GAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHF  245 (475)
Q Consensus       166 ~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l  245 (475)
                      ++.||++++++++||+|||++|+.+.....+..++|||+||||||++++++.++.++++++.++.++||++||+.|.+++
T Consensus       162 ~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l  241 (554)
T 1yuw_A          162 GTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHF  241 (554)
T ss_dssp             HHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred             HHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999876543478999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEeccccCccceEEEcHHHHHHHHHHHHHHHHHHHHHHH
Q 041815          246 IQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCL  325 (475)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l  325 (475)
                      .++|.++++.++..+++.+.+|+.+||++|+.|+......+.++.+.+|.++...|+|++|+++++++++++.++++++|
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L  321 (554)
T 1yuw_A          242 IAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKAL  321 (554)
T ss_dssp             HHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHH
T ss_pred             HHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999988989999999999999999999999999999999888888899999999999999999999999999999


Q ss_pred             HhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcCCCCCcccceEEEecccCCC
Q 041815          326 RTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVNPNYN  405 (475)
Q Consensus       326 ~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~~~~~~~~~~~~~d~~p~~~  405 (475)
                      +++++...+++.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.++|...++++++++.|++|+++
T Consensus       322 ~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~sl  401 (554)
T 1yuw_A          322 RDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSL  401 (554)
T ss_dssp             HHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCE
T ss_pred             HHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeEE
Confidence            99999888999999999999999999999999977888899999999999999999999986556688999999999997


Q ss_pred             Ccccc----------cccccc-cccCC-CCCCCCCccccccceec-----cCcccccccccCCCCCCceeecccCCCCCC
Q 041815          406 SPLEL----------KTTTSF-AAQNL-PSRGGHKSHQAHDLQLK-----NHKTLSKCNGCKRPAFGLMYRCELCNFNLH  468 (475)
Q Consensus       406 ~~~~~----------~~~~~~-~~~~~-~~~~~~~~~~~h~l~~~-----~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~  468 (475)
                      +....          +++.|. ..+.+ +..++|+...+|.+++.     +|..++++..-++|-....-..-+..|++.
T Consensus       402 gi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id  481 (554)
T 1yuw_A          402 GIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDID  481 (554)
T ss_dssp             EEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEEC
T ss_pred             EEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEc
Confidence            64221          111222 12223 56788888888888853     466678888877775433333344445444


Q ss_pred             c
Q 041815          469 I  469 (475)
Q Consensus       469 ~  469 (475)
                      .
T Consensus       482 ~  482 (554)
T 1yuw_A          482 A  482 (554)
T ss_dssp             T
T ss_pred             c
Confidence            3
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D Back     alignment and structure
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Back     alignment and structure
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Back     alignment and structure
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} Back     alignment and structure
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A Back     alignment and structure
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 Back     alignment and structure
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3 Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* Back     alignment and structure
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} Back     alignment and structure
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* Back     alignment and structure
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* Back     alignment and structure
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* Back     alignment and structure
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* Back     alignment and structure
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} Back     alignment and structure
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Back     alignment and structure
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} Back     alignment and structure
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus} Back     alignment and structure
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Back     alignment and structure
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} Back     alignment and structure
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} Back     alignment and structure
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Back     alignment and structure
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes} Back     alignment and structure
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* Back     alignment and structure
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* Back     alignment and structure
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} Back     alignment and structure
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Back     alignment and structure
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Back     alignment and structure
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* Back     alignment and structure
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* Back     alignment and structure
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* Back     alignment and structure
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} Back     alignment and structure
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O Back     alignment and structure
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} Back     alignment and structure
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A Back     alignment and structure
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} Back     alignment and structure
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Back     alignment and structure
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Back     alignment and structure
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* Back     alignment and structure
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5 Back     alignment and structure
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12} Back     alignment and structure
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5 Back     alignment and structure
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Back     alignment and structure
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A Back     alignment and structure
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* Back     alignment and structure
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A* Back     alignment and structure
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A Back     alignment and structure
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A Back     alignment and structure
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens} Back     alignment and structure
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans} Back     alignment and structure
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6 Back     alignment and structure
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A* Back     alignment and structure
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A Back     alignment and structure
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens} Back     alignment and structure
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus} Back     alignment and structure
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus} Back     alignment and structure
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Back     alignment and structure
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A* Back     alignment and structure
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6 Back     alignment and structure
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Back     alignment and structure
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A Back     alignment and structure
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus} Back     alignment and structure
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A* Back     alignment and structure
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus} Back     alignment and structure
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} Back     alignment and structure
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Back     alignment and structure
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens} Back     alignment and structure
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Back     alignment and structure
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A Back     alignment and structure
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6 Back     alignment and structure
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Back     alignment and structure
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Back     alignment and structure
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X* Back     alignment and structure
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A* Back     alignment and structure
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A Back     alignment and structure
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis} Back     alignment and structure
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis} Back     alignment and structure
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis} Back     alignment and structure
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Back     alignment and structure
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A Back     alignment and structure
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3 Back     alignment and structure
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A* Back     alignment and structure
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Back     alignment and structure
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 475
d1bupa1185 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPas 1e-82
d1bupa2193 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATP 5e-81
d1dkgd2198 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATP 1e-78
d1dkgd1183 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPas 2e-78
d1jcea2196 c.55.1.1 (A:141-336) Prokaryotic actin homolog Mre 5e-29
d1jcea1137 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB 2e-27
d2zgya2163 c.55.1.1 (A:158-320) Plasmid segregation protein P 2e-23
d2fsja1161 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 3e-20
d1v5na_89 g.49.1.3 (A:) Pdi-like hypothetical protein At1g60 2e-12
d1e4ft2191 c.55.1.1 (T:200-390) Cell division protein FtsA {T 5e-06
d1faqa_52 g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 7e-05
d1xa6a362 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain 2e-04
d1ptqa_50 g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {M 2e-04
d1r79a_84 g.49.1.1 (A:) Diacylglycerol kinase delta {Human ( 0.001
d1huxa_259 c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase comp 0.002
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 185 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  251 bits (642), Expect = 1e-82
 Identities = 139/185 (75%), Positives = 157/185 (84%), Gaps = 1/185 (0%)

Query: 8   PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPT 67
           PA+GIDLG+TYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD E  +GDAAKNQVAMNPT
Sbjct: 2   PAVGIDLGSTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 61

Query: 68  NTVFDAKRLIGRRFGDVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMV 127
           NTVFDAKRLIGRRF D  VQSD+K WPF VV     +P + V  KGE K +  EE+SSMV
Sbjct: 62  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDA-GRPKVQVEYKGETKSFYPEEVSSMV 120

Query: 128 LAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAY 187
           L KM++IAE Y+G  V+NAVVTVPAYF DSQRQATKDAG +AGLNVL+II+EPTAAAIAY
Sbjct: 121 LTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAY 180

Query: 188 GLDRK 192
           GLD+K
Sbjct: 181 GLDKK 185
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 193 Back     information, alignment and structure
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 198 Back     information, alignment and structure
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 183 Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 196 Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 137 Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Length = 163 Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 161 Back     information, alignment and structure
>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 89 Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Length = 191 Back     information, alignment and structure
>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 52 Back     information, alignment and structure
>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62 Back     information, alignment and structure
>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]} Length = 50 Back     information, alignment and structure
>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]} Length = 84 Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Length = 259 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query475
d1bupa2193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 100.0
d1dkgd2198 Heat shock protein 70kDa, ATPase fragment {Escheri 100.0
d1bupa1185 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 100.0
d1dkgd1183 Heat shock protein 70kDa, ATPase fragment {Escheri 100.0
d1jcea2196 Prokaryotic actin homolog MreB {Thermotoga maritim 99.87
d1jcea1137 Prokaryotic actin homolog MreB {Thermotoga maritim 99.87
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 99.66
d2zgya2163 Plasmid segregation protein ParM {Escherichia coli 99.59
d2fsja1161 Hypothetical protein Ta0583 {Archaeon Thermoplasma 99.38
d1v5na_89 Pdi-like hypothetical protein At1g60420 {Thale cre 99.32
d1huxa_259 Hydroxyglutaryl-CoA dehydratase component A {Acida 99.03
d1k8ka2258 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 98.41
d2fxua2225 Actin {Cow (Bos taurus) [TaxId: 9913]} 98.35
d1nbwa3202 ATPase domain of the glycerol dehydratase reactiva 98.34
d2d0oa3203 Diol dehydratase-reactivating factor large subunit 98.31
d1k8kb1190 Actin-related protein 2, Arp2 {Cow (Bos taurus) [T 98.05
d2fxua1140 Actin {Cow (Bos taurus) [TaxId: 9913]} 97.45
d1k8ka1158 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 97.29
d2p3ra2247 Glycerol kinase {Escherichia coli [TaxId: 562]} 96.84
d1r59o2235 Glycerol kinase {Enterococcus casseliflavus [TaxId 96.83
d2i7na2212 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 96.58
d1yuwa1159 DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} 96.54
d1zc6a1114 Probable N-acetylglucosamine kinase CV2896 {Chromo 96.32
d1e4ft1193 Cell division protein FtsA {Thermotoga maritima [T 96.16
d1faqa_52 RAF-1 {Human (Homo sapiens) [TaxId: 9606]} 96.14
d1sz2a1319 Glucokinase Glk {Escherichia coli [TaxId: 562]} 96.07
d2fsja2164 Hypothetical protein Ta0583 {Archaeon Thermoplasma 95.8
d1t6ca2180 Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 95.59
d1kbea_49 Kinase suppressor of Ras, Ksr {Mouse (Mus musculus 95.47
d2ch5a2117 N-acetylglucosamine kinase, NAGK {Human (Homo sapi 95.44
d1tbna_66 Protein kinase c-gamma {Rat (Rattus rattus) [TaxId 94.66
d2fc7a169 Zinc finger ZZ-type-containing protein 3, ZZZ3 {Hu 94.5
d2ewsa1267 Type II pantothenate kinase, CoaW {Staphylococcus 94.41
d1q18a1110 Glucokinase Glk {Escherichia coli [TaxId: 562]} 94.4
d2zgya1157 Plasmid segregation protein ParM {Escherichia coli 94.25
d1xa6a362 Beta-chimaerin, middle domain {Human (Homo sapiens 93.29
d1ptqa_50 Protein kinase C-delta (PKCdelta) {Mouse (Mus musc 92.81
d1u6za3177 Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 92.13
d1dkza2118 DnaK {Escherichia coli [TaxId: 562]} 91.92
d2dipa185 Zinc finger ZZ-type-containing protein 2 {Human (H 91.43
d1u00a2115 Chaperone protein hscA (Hsc66) {Escherichia coli [ 90.13
d2p3ra1252 Glycerol kinase {Escherichia coli [TaxId: 562]} 90.12
d1r79a_84 Diacylglycerol kinase delta {Human (Homo sapiens) 90.06
d2hoea2169 N-acetylglucosamine kinase {Thermotoga maritima [T 89.51
d2aa4a2170 N-acetylmannosamine kinase NanK {Escherichia coli 88.68
d1tota152 CREB-binding protein, CBP {Mouse (Mus musculus) [T 87.88
d1z05a2197 Transcriptional regulator VC2007 {Vibrio cholerae 87.61
d2ap1a1186 Putative regulator protein YcfX {Salmonella typhim 86.72
d2gupa2175 Hypothetical protein SP2142 {Streptococcus pneumon 86.63
d1nu0a_138 Hypothetical protein YqgF (RuvX) {Escherichia coli 85.68
d1z6ra3196 Mlc protein {Escherichia coli [TaxId: 562]} 84.15
d1woqa1129 Inorganic polyphosphate/ATP-glucomannokinase PPGMK 84.11
d1iv0a_98 Hypothetical protein, YqgF homologue {Thermus ther 82.77
d1r59o1252 Glycerol kinase {Enterococcus casseliflavus [TaxId 81.32
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3e-39  Score=289.81  Aligned_cols=190  Identities=74%  Similarity=1.134  Sum_probs=183.6

Q ss_pred             CceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHH
Q 041815          196 EKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAK  275 (475)
Q Consensus       196 ~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K  275 (475)
                      ++++||||+||||+|+|++++.++.++++++.++..+||++||++|++|+.++|.++++.++..+++.+.+|+.+||++|
T Consensus         4 e~~VlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K   83 (193)
T d1bupa2           4 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK   83 (193)
T ss_dssp             CEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEEeCCCeEEEEEEEEeCCEEEEEEecCCCCcchhHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHh
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCceeEEEEeccccCccceEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHH
Q 041815          276 RILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQ  355 (475)
Q Consensus       276 ~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~  355 (475)
                      +.||.+.++.+.++.+..+.+....|||++|+++++|+++++.++++++|++++....+|+.|+|+||+||+|+|++.|+
T Consensus        84 ~~ls~~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGG~sr~p~v~~~i~  163 (193)
T d1bupa2          84 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ  163 (193)
T ss_dssp             HHHTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHH
T ss_pred             hccCCCceEEEEEecccCCCccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHH
Confidence            99999999999999988898999999999999999999999999999999999999899999999999999999999999


Q ss_pred             HHcCCcccccCCCCcchhhchHHHHHHHHc
Q 041815          356 EFFNGKRLCKNINPDEAVAYGAAVQAAVLS  385 (475)
Q Consensus       356 ~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~  385 (475)
                      +.|++.++..+.||++|||+|||++|++||
T Consensus       164 ~~f~~~~i~~~~~p~~aVa~GaA~~aa~ls  193 (193)
T d1bupa2         164 DFFNGKELNKSINPDEAVAYGAAVQAAILS  193 (193)
T ss_dssp             HHTTTCCCBCSSCGGGHHHHHHHHHHHHHC
T ss_pred             HHcCCCCCCCCCChHHHHHHHHHHHHHhhC
Confidence            999888888899999999999999999986
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2d0oa3 c.55.1.6 (A:404-606) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]} Back     information, alignment and structure
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} Back     information, alignment and structure
>d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fsja2 c.55.1.12 (A:1-164) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]} Back     information, alignment and structure
>d2fc7a1 g.44.1.6 (A:8-76) Zinc finger ZZ-type-containing protein 3, ZZZ3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1q18a1 c.55.1.7 (A:2-111) Glucokinase Glk {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2zgya1 c.55.1.1 (A:1-157) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2dipa1 g.44.1.6 (A:8-92) Zinc finger ZZ-type-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tota1 g.44.1.6 (A:1-52) CREB-binding protein, CBP {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1z05a2 c.55.1.10 (A:209-405) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2gupa2 c.55.1.10 (A:115-289) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1nu0a_ c.55.3.8 (A:) Hypothetical protein YqgF (RuvX) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1z6ra3 c.55.1.10 (A:211-406) Mlc protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]} Back     information, alignment and structure
>d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1r59o1 c.55.1.4 (O:5-256) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure