Citrus Sinensis ID: 041824

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
Protein Sequence
MGCASSNLLNQEDELSQLGSSALSQHIVSLTSTTYGLLNVDPPATTPPTRPQRFTLGSILPGEPVRAEVINSWELMSGLGESDNNSLRKAKENPSVNSAVIKSVLERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPLCS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccEEEcccccEEEEEccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccHHHHHHHHHHHHcccccccccEEEEEEEccccccccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHHHHccccccccHHHHHcccccccccccEEEEccEEEcHHHHHHHHHHccccHHHHcccccccccccccccccccEEEccccccccEEEEEccccccccEEEcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHccccccccccccccccEEEEEEEcccccEccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccHHHcccccccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEcccEcccHHHHHHHHHccHHHHHHcccccccccccccccccEEEEEcccccccEEEEEEcccccccEEEEcccccccccEEccccc
Coil and Loop (DISEMBL)
mgcassnllnqedeLSQLGSSALSQHIVSLTSttygllnvdppattpptrpqrftlgsilpgepvraEVINSWELMsglgesdnnslrkakenpsvnSAVIKSVLERFericppdgenkVVIYTTTLRGIRKTYEACKAAKSVIENFGvavserdvsmDRGFKEELRELMMRRRrrssssnnneeeaessvqplppvlprvfvkgryvggAEEVLRIVEEgwfgeliegipirklkgvcqgcadvrffpcfrcngscklvinmqprgktaalrcpdcnenglvlcplcs
Flexible Loop (DISEMBL)
mgcassnlLNQEDELSQLGSSALSQHIVSLTSTTYGLLNVDPPATTPPTRPQRFTLGSILPGEPVRAEVINSWELMSGLGESDNNslrkakenpsvnsAVIKSVLERfericppdgenkvviYTTTLRGIRKTYEACKAAKSVIenfgvavserdvsmdrgFKEELRELmmrrrrrssssnnneeeaessvqplppvlpRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAalrcpdcnenglvlcplcs
Low Complexity Region (SEG)
MGCASSNLLNQEDELSQLGSSALSQHIVSLTSTTYGLLNVDppattpptrpQRFTLGSILPGEPVRAEVINSWELMSGLGESDNNSLRKAKENPSVNSAVIKSVLERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKeelrelmmrrrrrssssnnneeeaessVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPLCS
Disordered region (IsUnstruct)
*************************HIVSLTSTTYGLLNV**************TLGSILPGEPVRAEVINSWEL***********************AVIKSVLERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVS********************************************VLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPL**
Disordered Region (DISOPRED)
*GCASSNL*****************HIVSLTSTTYG********************************************************************************ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM***********************PPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPLCS
Disordered Region (DISEMBL)
MGCASSNLLNQEDELSQLGSSALSQHIVSLTSTTYGLLNVDPPATTPPTRPQRFTLGSILPGEPVRAEVINSWELMSGLGESDNNSLRKAKENPSVNSAVIKSVLERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM*********************PLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPLCS
Disordered Region (DISPRO)
***************SQLGSSALSQHIVSLTSTTYGLLNVDP*************************EVIN*WELMSGLG**********************SVLERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMR******************VQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPLCS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGCASSNLLNQEDELSQLGSSALSQHIVSLTSTTYGLLNVDPPATTPPTRPQRFTLGSILPGEPVRAEVINSWELMSGLGESDNNSLRKAKENPSVNSAVIKSVLERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPLCS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	289	2.2.26 [Sep-21-2011]
Q9FLE8	390	Uncharacterized protein A	no	no	0.723	0.535	0.339	8e-31
Q9LH89	428	Uncharacterized protein A	no	no	0.543	0.366	0.360	2e-27
Q50H32	290	Glutaredoxin domain-conta	yes	no	0.653	0.651	0.307	3e-20
A8MXD5	290	Glutaredoxin domain-conta	yes	no	0.653	0.651	0.298	2e-19
Q9VNL4	454	Glutaredoxin domain-conta	yes	no	0.515	0.328	0.323	7e-19
Q9W4S1	582	Glutaredoxin domain-conta	no	no	0.515	0.256	0.311	2e-18

>sp|Q9FLE8|Y5986_ARATH Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=1 SV=1

 Score =  134 bits (337), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 132/271 (48%), Gaps = 62/271 (22%)

Query: 61  PGEPVRAEVINSWELMSGLGE----SDNNSLR-------------KAKENPSVNSAVIKS 103
           PGEP   E IN+WELM GL +       N LR                 + +V+  + KS
Sbjct: 137 PGEP---ETINTWELMEGLEDVSPLRSPNHLRSFSFDFVRIQPSHDHDHDVAVSFDLPKS 193

Query: 104 VLE-------RFERICPPD----------GENKVVIYTTTLRGIRKTYEACKAAKSVIEN 146
                     R + + PPD          G+ +VV+Y T+LRGIRKTYE C   + ++++
Sbjct: 194 RFHENVKSSCRVDDLDPPDIVSRFKRKTLGKERVVLYFTSLRGIRKTYEDCCNIRIILKS 253

Query: 147 FGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGR 206
            G+ + ERDVSM  GFK+EL++L+          NN           +   LPRVF+  +
Sbjct: 254 LGIRIDERDVSMHSGFKDELKKLL------EGKFNNG----------VGITLPRVFLGNK 297

Query: 207 YVGGAEEVLRIVEEGWFGELIEGIPIRK-----LKGVCQGCADVRFFPCFRCNGSCKLVI 261
           Y+GG EE+ ++ E G   +LI+   + +         C+ C DVRF PC  C+GSCKL  
Sbjct: 298 YLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGFGNECEACGDVRFVPCETCSGSCKLYH 357

Query: 262 NMQPRGKTAA----LRCPDCNENGLVLCPLC 288
             +   +        RCP CNENGL+ C +C
Sbjct: 358 EGEEEDEGVTEYGFQRCPYCNENGLIRCHVC 388

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LH89|Y3885_ARATH Uncharacterized protein At3g28850 OS=Arabidopsis thaliana GN=At3g28850 PE=1 SV=1

 Score =  123 bits (308), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 106/194 (54%), Gaps = 37/194 (19%)

Query: 116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRR 175
           G+ +V++Y T+LRGIRKTYE     + ++++ G+ V ERDVSM  GFK+EL+EL+     
Sbjct: 249 GKERVILYFTSLRGIRKTYEESCDVRVILKSLGIRVDERDVSMHSGFKDELKELL----- 303

Query: 176 RSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGI----P 231
                       E   + +   LPRVF+  +Y+GGAEE+ ++ E+G   +L+ G      
Sbjct: 304 -----------GEKFNKGVGITLPRVFLGRKYIGGAEEIRKLNEDGKLEKLLGGCERVEE 352

Query: 232 IRKLKGV-CQGCADVRFFPCFRCNGSCKL----------------VINMQPRGKTAALRC 274
            +   G+ C+ C DVRF PC  C+GSCK+                  +++   +     C
Sbjct: 353 NQNGNGLECEACGDVRFVPCETCSGSCKVYYEYEDDDDDDDEGDDDESVKEEREYGFQTC 412

Query: 275 PDCNENGLVLCPLC 288
           PDCNENGL+ CP+C
Sbjct: 413 PDCNENGLIRCPVC 426

Arabidopsis thaliana (taxid: 3702)

>sp|Q50H32|GRCR1_MOUSE Glutaredoxin domain-containing cysteine-rich protein 1 OS=Mus musculus GN=Grxcr1 PE=1 SV=1

 Score = 99.4 bits (246), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 19/208 (9%)

Query: 82  SDNNSLRKAKENPSVNSAVIKSVLERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAK 141
           S N ++R  K   S   A+  ++ +  ++       ++VVIYTT LR +R T+E C+  +
Sbjct: 101 SKNGTVRGVKYKVSAGQALFNNLTKVLQQPSADLEFDRVVIYTTCLRVVRTTFERCELVR 160

Query: 142 SVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRV 201
            + +N  V   E++++++  + +EL E    R RR S +               P LP V
Sbjct: 161 KIFQNHRVKFEEKNIALNGDYGKELDE----RCRRVSEA---------------PSLPVV 201

Query: 202 FVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCKLVI 261
           F+ G Y+GGAE++L + E G   +L+  I   +    C  C    F PC  C+GS   V 
Sbjct: 202 FIDGHYLGGAEKILSMNESGELQDLLTKIERVQHPHECPSCGGFGFLPCSVCHGSKMSVF 261

Query: 262 NMQPRGKTAALRCPDCNENGLVLCPLCS 289
                    AL+C  CNENGL  C  C+
Sbjct: 262 RNCFTDAFKALKCTACNENGLQRCKNCT 289

May play a role in actin filament architecture in developing stereocilia of sensory cells.

Mus musculus (taxid: 10090)

>sp|A8MXD5|GRCR1_HUMAN Glutaredoxin domain-containing cysteine-rich protein 1 OS=Homo sapiens GN=GRXCR1 PE=1 SV=1

 Score = 96.7 bits (239), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 19/208 (9%)

Query: 82  SDNNSLRKAKENPSVNSAVIKSVLERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAK 141
           S N ++R  K   S   A+  ++ +  ++       ++VVIYTT LR +R T+E C+  +
Sbjct: 101 SKNGTVRGVKYKVSAGQALFNNLTKVLQQPSTDLEFDRVVIYTTCLRVVRTTFERCELVR 160

Query: 142 SVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRV 201
            + +N  V   E++++++  + +EL E    R RR S +               P LP V
Sbjct: 161 KIFQNHRVKFEEKNIALNGEYGKELDE----RCRRVSEA---------------PSLPVV 201

Query: 202 FVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCKLVI 261
           F+ G Y+GGAE++L + E G   +++  I   +    C  C    F PC  C+GS   + 
Sbjct: 202 FIDGHYLGGAEKILSMNESGELQDILTKIERVQHPHECPSCGGFGFLPCSVCHGSKMSMF 261

Query: 262 NMQPRGKTAALRCPDCNENGLVLCPLCS 289
                    AL+C  CNENGL  C  C+
Sbjct: 262 RNCFTDSFKALKCTACNENGLQRCKNCA 289

May play a role in actin filament architecture in developing stereocilia of sensory cells.

Homo sapiens (taxid: 9606)

>sp|Q9VNL4|GRCR1_DROME Glutaredoxin domain-containing cysteine-rich protein CG31559 OS=Drosophila melanogaster GN=CG31559 PE=1 SV=2

 Score = 94.7 bits (234), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSS 178
           KVV+YTT++  IR+TY  C   K ++    V   ERDV M   ++ E+R+ M   + R  
Sbjct: 306 KVVLYTTSMGIIRETYTKCANVKQILRTLLVKFEERDVFMSVEYQAEMRQRMQSGQVR-- 363

Query: 179 SSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGV 238
                              +P+++V+G+++G AE V R+ E G   +L++          
Sbjct: 364 -------------------VPQLYVEGQHIGDAETVERMNESGELRQLLKPYKSMASTYT 404

Query: 239 CQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPLC 288
           CQ C   R  PC  CNGS K V       +  AL+C +C+E GLV C  C
Sbjct: 405 CQTCGGYRLLPCPSCNGSKKSVHRNHFTAEFVALKCMNCDEVGLVKCHNC 454

Drosophila melanogaster (taxid: 7227)

>sp|Q9W4S1|GRCR2_DROME Glutaredoxin domain-containing cysteine-rich protein CG12206 OS=Drosophila melanogaster GN=CG12206 PE=2 SV=2

 Score = 93.2 bits (230), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 21/170 (12%)

Query: 119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSS 178
           KVV+YTT++  IR TY  C   K ++    +   ERD+ M   +++E+RE M     R  
Sbjct: 434 KVVLYTTSMGIIRDTYAKCANVKKILRTLLIKFEERDIFMSVEYQQEMRERMQDETIR-- 491

Query: 179 SSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGV 238
                              +P++FV+G+ +G A  V R+ E G   +L+           
Sbjct: 492 -------------------VPQLFVEGQLIGDANIVERLNESGELRQLLRPYKSIATAYT 532

Query: 239 CQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPLC 288
           CQ C   R  PC  CNGS K +       +  AL+C +C+E GL+ CP C
Sbjct: 533 CQTCGGYRMLPCPACNGSKKSMHRNHFTAEFVALKCMNCDEVGLIKCPNC 582

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	289
225426560	320	PREDICTED: uncharacterized protein At5g3	0.927	0.837	0.504	7e-78
255555775	327	electron transporter, putative [Ricinus	0.930	0.822	0.487	3e-77
358248808	270	uncharacterized protein LOC100780345 [Gl	0.889	0.951	0.533	2e-75
365222868	327	Hop-interacting protein THI143 [Solanum	0.934	0.825	0.491	4e-75
449452180	314	PREDICTED: uncharacterized protein At5g3	0.920	0.847	0.462	2e-71
297813511	325	glutaredoxin family protein [Arabidopsis	0.927	0.824	0.459	1e-69
15235179	334	Glutaredoxin family protein [Arabidopsis	0.927	0.802	0.453	5e-66
297742450	284	unnamed protein product [Vitis vinifera]	0.771	0.785	0.518	3e-63
357521581	274	hypothetical protein MTR_8g106900 [Medic	0.858	0.905	0.485	3e-63
147790454	236	hypothetical protein VITISV_042863 [Viti	0.608	0.745	0.554	5e-56

>gi|225426560|ref|XP_002272456.1| PREDICTED: uncharacterized protein At5g39865 [Vitis vinifera]

 Score =  296 bits (758), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 172/341 (50%), Positives = 216/341 (63%), Gaps = 73/341 (21%)

Query: 1   MGCASSNLLNQEDELSQLGSSALSQHIVSLTSTTYGLLNVDPPATTPPTRPQ--RFTLGS 58
           MGC SS LLN E+EL QL  S L  HIVSLTSTTYGLLN+DPP           RFTLGS
Sbjct: 1   MGCVSSTLLNHEEELGQLSGSTLGHHIVSLTSTTYGLLNLDPPPQPTHPPTLTPRFTLGS 60

Query: 59  ILPG---EP--VRAE--VINSWELMSGLGESDNNSLR----------------------K 89
           + P    EP  +R+E  VINSWELM+GL   D +S R                      K
Sbjct: 61  VFPSPLSEPRGIRSEPEVINSWELMAGL---DADSFRFPPLPLAPSKPKALAIKETNINK 117

Query: 90  AKENPS-------------VNSAVIK---SVLERFERICPPDGENKVVIYTTTLRGIRKT 133
              NP+             +N +V++   ++L+ FER+CPP+GEN+VV+YTTTLRG+RKT
Sbjct: 118 ENSNPNRPNCGDELRVLKPLNDSVLRQCLALLDGFERLCPPNGENRVVVYTTTLRGVRKT 177

Query: 134 YEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP 193
           +E C A ++ IE  GV++ ERD+SMDRGFKEELRELM               + + S Q 
Sbjct: 178 FEDCNAVRAAIEGLGVSLCERDISMDRGFKEELRELM---------------KGKDSCQM 222

Query: 194 LPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRC 253
           +P   PRVFVKGRYVGGAEEVL+IVEEG  GEL++G+P  +   VC+GC  VRF PCF+C
Sbjct: 223 VP---PRVFVKGRYVGGAEEVLKIVEEGCLGELLQGLPKIRAGEVCEGCGGVRFLPCFQC 279

Query: 254 NGSCKLVINM-----QPRGKTAALRCPDCNENGLVLCPLCS 289
           NGSCK+V+ +     Q +G++  +RCPDCNENGLVLCP+CS
Sbjct: 280 NGSCKMVMMVKEEMEQKQGRSVVVRCPDCNENGLVLCPICS 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555775|ref|XP_002518923.1| electron transporter, putative [Ricinus communis] gi|223541910|gb|EEF43456.1| electron transporter, putative [Ricinus communis]

 Score =  294 bits (752), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 169/347 (48%), Positives = 211/347 (60%), Gaps = 78/347 (22%)

Query: 1   MGCASSNLLNQEDELSQLGSSALSQHIVSLTSTTYGLLNVDPPATTPPT--------RPQ 52
           MGC SSNLLN EDEL+QLGSSALS HIVSLTSTTYGLLN+DPP  TP +         P 
Sbjct: 1   MGCVSSNLLNNEDELTQLGSSALSHHIVSLTSTTYGLLNLDPP--TPQSSATATTPPPPA 58

Query: 53  RFTLGSILPG---EPVR--------AEVINSWELMSGLG--------------------- 80
           RFTLGSI P    EP           E INSWELMSGL                      
Sbjct: 59  RFTLGSIFPSPLCEPKSLWSEPRSLPETINSWELMSGLDTDSFRFSPIIKKDLAYLPNKE 118

Query: 81  ESDNNSLRKAKENPSVNSAVIKSV--------LERFERICPPDGENKVVIYTTTLRGIRK 132
            S+ N L+  K++   N+              LERFE++CPP+G++KVVIYTT+LRGIR+
Sbjct: 119 NSNPNFLKPFKDSSFANTPPPPPPPLKENAHSLERFEKLCPPNGDDKVVIYTTSLRGIRE 178

Query: 133 TYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQ 192
           T++AC   ++ I  FGV + ERDVSMDRGF+EELRELM  +  +++              
Sbjct: 179 TFDACSVVRAAIGGFGVLICERDVSMDRGFREELRELMRGKEPKAT-------------- 224

Query: 193 PLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFR 252
            LP   PRVF+KGRY+G  EEV+RI EEG  GEL++G+P ++   +C GC DVRF PCF 
Sbjct: 225 -LP---PRVFIKGRYIGSVEEVMRIAEEGLMGELLQGLPKKRAGDMCDGCGDVRFLPCFS 280

Query: 253 CNGSCKLVINMQ----------PRGKTAALRCPDCNENGLVLCPLCS 289
           CNGS KLV+ ++           + +T  +RCPDCNENGLVLCP+C+
Sbjct: 281 CNGSSKLVMLVKDEEEEKEPGLKQRRTVVVRCPDCNENGLVLCPICA 327

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248808|ref|NP_001239943.1| uncharacterized protein LOC100780345 [Glycine max] gi|255642823|gb|ACU22113.1| unknown [Glycine max]

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 161/302 (53%), Positives = 205/302 (67%), Gaps = 45/302 (14%)

Query: 1   MGCASSNLLNQEDELS-QLGSSALSQHIVSLTSTTYGLLNVDPPATTPPTRPQRFTLGSI 59
           MGC SSNLLNQ+++ S QLGSSAL  HIVSLTSTTYGLL +DPP+T P     RFTLGS+
Sbjct: 1   MGCVSSNLLNQDEDFSTQLGSSALGHHIVSLTSTTYGLLTLDPPSTPP----SRFTLGSL 56

Query: 60  LPGEPVRAEVINSWELMSGLGESDNNSLR-------KAKEN---PSVNSAVI--KSVLER 107
            P EP   EVINSWELMSGL   D +S R       K KEN   P   S ++   ++ +R
Sbjct: 57  FPSEP---EVINSWELMSGL---DTDSFRFSPLPLPKPKENRLTPPTGSKLLLTPTLADR 110

Query: 108 FERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELR 167
           FE+ICPP+GE +VVIYTT+LRG+R T+EAC A ++ +E FGV + ERDVSM  GF+EELR
Sbjct: 111 FEKICPPNGEKRVVIYTTSLRGVRTTFEACNAVRAALEGFGVVICERDVSMHSGFREELR 170

Query: 168 ELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELI 227
            L+  ++                      V PRVFVKG Y+GGA+E+L++ EEG  G+L+
Sbjct: 171 TLLKGKQVM--------------------VPPRVFVKGLYIGGADEMLKVAEEGLLGDLL 210

Query: 228 EGIPIRKLKGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPL 287
           +G+P +K+  VC GC D+RF PCF CNGSCK ++  Q  G+T  ++C  CNENGLVLCPL
Sbjct: 211 DGLPRKKVGAVCVGCGDLRFLPCFNCNGSCKTLVKEQ--GRTVVVKCTHCNENGLVLCPL 268

Query: 288 CS 289
           C+
Sbjct: 269 CT 270

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|365222868|gb|AEW69786.1| Hop-interacting protein THI143 [Solanum lycopersicum]

 Score =  287 bits (734), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 169/344 (49%), Positives = 215/344 (62%), Gaps = 74/344 (21%)

Query: 1   MGCASSNLLNQEDELSQLGSSA--LSQHIVSLTSTTYGLLNVDPPATTPPTRPQ------ 52
           MGC SS LLNQE+E +Q+G SA   S HIVSLTSTTYGLL +DPP+T PP          
Sbjct: 1   MGCVSSTLLNQENEFTQMGGSAAGFSHHIVSLTSTTYGLLTLDPPSTPPPITVPPTPTLP 60

Query: 53  -RFTLGSILPG---EP--VRAEVINSWELMSGLGESDNN---------SLRKA------- 90
            R TLGS++P    EP  +++++INSWELM+GL  +            SLRK+       
Sbjct: 61  PRHTLGSLVPSPLFEPRILKSDIINSWELMAGLDSTSTTPISDSFRFLSLRKSTPDSSFR 120

Query: 91  -------KEN-----PSVNSAVIK------------SVLERFERICPPDGENKVVIYTTT 126
                  KEN     PS   A+ K            SVL+ FERICPP+G++K+VIYTTT
Sbjct: 121 FLRSSPNKENSSPNIPSFTHALDKTDIFNPTRLSSASVLDGFERICPPNGDDKIVIYTTT 180

Query: 127 LRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEE 186
           LRG+RKT+EAC A +S IE  GV  SERD+SMD+GF+EEL++LM               +
Sbjct: 181 LRGVRKTFEACNAVRSAIEGLGVLYSERDISMDKGFREELKQLM---------------K 225

Query: 187 AESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVR 246
            + S + +P   PRVF KGRY+GGAEEV+RIVEEG FG+L++G+P  K   VC+GC  +R
Sbjct: 226 GKESTELIP---PRVFFKGRYIGGAEEVMRIVEEGNFGDLLQGLPKMKAGSVCEGCGGIR 282

Query: 247 FFPCFRCNGSCKLVIN--MQPRGKTAALRCPDCNENGLVLCPLC 288
           F PCF CNGSCK+V     Q  G+   +RC +CNENGLVLCP+C
Sbjct: 283 FMPCFTCNGSCKMVKEDVEQNEGRAVVVRCSECNENGLVLCPIC 326

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452180|ref|XP_004143838.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus] gi|449527262|ref|XP_004170631.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 156/337 (46%), Positives = 200/337 (59%), Gaps = 71/337 (21%)

Query: 1   MGCASSNLLNQEDELSQLGSSALSQHIVSLTSTTYGLLNVDPPATTPPTRPQRFTLGSIL 60
           MGCASS+LLN +D+  QLGSSAL+ H VSLTSTTYGLLN+DPP+   P           L
Sbjct: 1   MGCASSHLLNHDDDFPQLGSSALTHHFVSLTSTTYGLLNLDPPSAAAPPPLPIPA--KSL 58

Query: 61  PGEPVRAEVINSWELMSGLGESD--------------NNSLRKAKENPS-------VNSA 99
             +P   EVINSWELM GL                   N +   KEN +       V S+
Sbjct: 59  RSDP---EVINSWELMDGLDADSFRFSLLSQSKQFALKNDIDSNKENSNPNFPTQIVESS 115

Query: 100 V---------------------IKSVLERFERICPPDGENKVVIYTTTLRGIRKTYEACK 138
           V                     +K +L+R+E +CPP GEN+VV+YTTTLRGIRKT+E C 
Sbjct: 116 VLRPSSRPAAAAAAAPIAIPSPVKHLLDRYETLCPPSGENRVVVYTTTLRGIRKTFEECN 175

Query: 139 AAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL 198
           A ++ IE  GV + ERDVSMDRGF+EEL+ELM  R + +                   V 
Sbjct: 176 AVRAAIEGAGVQICERDVSMDRGFREELKELMKGRGQEAM------------------VP 217

Query: 199 PRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCK 258
           PRVF++G+Y+G  E+VL++VEEG  GEL+EG+P  K   VC+GC + RF PCF+CNGSCK
Sbjct: 218 PRVFIRGKYIGDGEKVLKMVEEGVLGELLEGLPKIKAGSVCEGCGNARFLPCFQCNGSCK 277

Query: 259 LVINMQPRG------KTAALRCPDCNENGLVLCPLCS 289
           +V+ ++  G      K   ++CPDCNENGLVLCP+CS
Sbjct: 278 IVMGVKKEGHHRHGSKGIVVKCPDCNENGLVLCPICS 314

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297813511|ref|XP_002874639.1| glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata] gi|297320476|gb|EFH50898.1| glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  269 bits (687), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 159/346 (45%), Positives = 200/346 (57%), Gaps = 78/346 (22%)

Query: 1   MGCASSNLLNQEDELSQLG--SSALSQHIVSLTSTTYGLLNVDPPA------------TT 46
           MGC SSNLLN +++  Q+G  SSA   HIV LTSTTYGLL +DPP              T
Sbjct: 1   MGCVSSNLLNHDEDFPQIGGGSSAFGHHIVKLTSTTYGLLTLDPPPPSSAAFSSDNMPMT 60

Query: 47  PPTRPQR-FTLGSILPGEPVRAEVINSWELMSGL---------------------GESDN 84
           PP + +  ++   ++  EP   E+INSWELMSGL                     GE+  
Sbjct: 61  PPDKSKSLWSEPRLIKSEP---EIINSWELMSGLDGESFRFTPLPKTPVKYKVFGGENKE 117

Query: 85  NSLRKAKENPS--VNSAVIK-------------------SVLERFERICPPDGENKVVIY 123
           NS    + NP   +N  V+K                    + E+FERICPP GEN+VV+Y
Sbjct: 118 NS-DPNRRNPRKILNDEVLKPLDPNSDPNLRNPRKSLDLKLDEKFERICPPGGENRVVMY 176

Query: 124 TTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNN 183
           TT+LRG+R+T+EAC A ++ +E+FGV V ERDVSMDRGF+EEL  LM +R +        
Sbjct: 177 TTSLRGVRRTFEACNAVRAAVESFGVVVCERDVSMDRGFREELVSLMAKRVK-------- 228

Query: 184 EEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCA 243
               +  V  LP   PRVFVKG Y+GG EEVLR+VEEG FGELI GIP +K  G C GC 
Sbjct: 229 ----DDGVAALP---PRVFVKGMYIGGVEEVLRLVEEGSFGELIRGIPRKKADGACDGCG 281

Query: 244 DVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPLCS 289
            + F PCFRC+GSCK+V           +RC +CNENGLV CP+CS
Sbjct: 282 GMFFLPCFRCDGSCKMVKGWG--SAAVVVRCSECNENGLVPCPICS 325

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235179|ref|NP_192801.1| Glutaredoxin family protein [Arabidopsis thaliana] gi|4115916|gb|AAD03427.1| F3H7.9 gene product [Arabidopsis thaliana] gi|4539441|emb|CAB40029.1| putative protein [Arabidopsis thaliana] gi|7267760|emb|CAB78186.1| putative protein [Arabidopsis thaliana] gi|332657511|gb|AEE82911.1| Glutaredoxin family protein [Arabidopsis thaliana]

 Score =  257 bits (656), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 161/355 (45%), Positives = 203/355 (57%), Gaps = 87/355 (24%)

Query: 1   MGCASSNLLNQEDELSQLG--SSALSQHIVSLTSTTYGLLNVDPPATTPPTRP--QRFTL 56
           MGC SSNLLN +++ SQ+G  SSA   HIV LTSTTYGLL +DPP    P     ++FT+
Sbjct: 1   MGCVSSNLLNHDEDFSQIGGGSSAFGHHIVKLTSTTYGLLTLDPPPPPSPPMTPPEKFTV 60

Query: 57  GS----------ILPGEPVRAEVINSWELMSGL---------------------GESDNN 85
            +          ++  EP   E+INSWELMSGL                     GE+  N
Sbjct: 61  DTKSKSIWSEPRVIKSEP---EIINSWELMSGLDGESFRFTPLPKTPVKYKVFGGENKEN 117

Query: 86  SLRKAKENP--SVNSAVIK-------------------------SVLERFERICPPDGEN 118
           S   ++ NP  ++N  V+K                          + E+FERICPP GEN
Sbjct: 118 S-DPSRRNPRKNLNDEVLKPLDLNREDSDSNSRSPRKSFKPLDLKLDEKFERICPPGGEN 176

Query: 119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSS 178
           +VV+YTT+LRG+R+T+EAC A ++ +E+FGV V ERDVSMDR F+EEL  LM +R     
Sbjct: 177 RVVMYTTSLRGVRQTFEACNAVRAAVESFGVVVCERDVSMDRRFREELVSLMAKR----- 231

Query: 179 SSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKL--- 235
                    +  V  LP   PRVFVKGRY+GG EEVLR+VEEG FGELI GIP +K    
Sbjct: 232 -------VGDEGVAALP---PRVFVKGRYIGGGEEVLRLVEEGSFGELISGIPRKKAGGC 281

Query: 236 -KGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPLCS 289
             G C GC  + F PCFRCNGSCK+V        +  +RC +CNENGLV CP+CS
Sbjct: 282 ESGACDGCGGLFFLPCFRCNGSCKMVKGWG--SASVVVRCNECNENGLVPCPICS 334

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742450|emb|CBI34599.3| unnamed protein product [Vitis vinifera]

 Score =  248 bits (632), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/266 (51%), Positives = 174/266 (65%), Gaps = 43/266 (16%)

Query: 1   MGCASSNLLNQEDELSQLGSSALSQHIVSLTSTTYGLLNVDPPATTPPTRPQ--RFTLGS 58
           MGC SS LLN E+EL QL  S L  HIVSLTSTTYGLLN+DPP           RFTLGS
Sbjct: 1   MGCVSSTLLNHEEELGQLSGSTLGHHIVSLTSTTYGLLNLDPPPQPTHPPTLTPRFTLGS 60

Query: 59  ILPGEPVRAEVINSWELMSGLGESDNNSLRKAKENPSVNSAVIK---SVLERFERICPPD 115
           + P  P+                S+   +R  K    +N +V++   ++L+ FER+CPP+
Sbjct: 61  VFP-SPL----------------SEPRGIRVLK---PLNDSVLRQCLALLDGFERLCPPN 100

Query: 116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRR 175
           GEN+VV+YTTTLRG+RKT+E C A ++ IE  GV++ ERD+SMDRGFKEELRELM     
Sbjct: 101 GENRVVVYTTTLRGVRKTFEDCNAVRAAIEGLGVSLCERDISMDRGFKEELRELM----- 155

Query: 176 RSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKL 235
                     + + S Q +P   PRVFVKGRYVGGAEEVL+IVEEG  GEL++G+P  + 
Sbjct: 156 ----------KGKDSCQMVP---PRVFVKGRYVGGAEEVLKIVEEGCLGELLQGLPKIRA 202

Query: 236 KGVCQGCADVRFFPCFRCNGSCKLVI 261
             VC+GC  VRF PCF+CNGSCK++I
Sbjct: 203 GEVCEGCGGVRFLPCFQCNGSCKMLI 228

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357521581|ref|XP_003631079.1| hypothetical protein MTR_8g106900 [Medicago truncatula] gi|92870985|gb|ABE80146.1| Thioredoxin fold [Medicago truncatula] gi|355525101|gb|AET05555.1| hypothetical protein MTR_8g106900 [Medicago truncatula] gi|388519077|gb|AFK47600.1| unknown [Medicago truncatula]

 Score =  247 bits (631), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 153/315 (48%), Positives = 186/315 (59%), Gaps = 67/315 (21%)

Query: 1   MGCASSNLLNQEDELSQLGSSALS--QHIVSLTSTTYGLLNVDPPATTPPTRPQRFTLGS 58
           MGC SS+LLN EDE    G+SAL    HIVSLTSTTYGLLN                  +
Sbjct: 1   MGCVSSHLLNHEDEF---GTSALGVGHHIVSLTSTTYGLLNT-------------LDPPT 44

Query: 59  ILPGEPVRAEVINSWELMSGLGESDNNSLRKAKENPSVNSAVIK---------------- 102
                P   E+INSWELM GL   D  S R +   P  +    K                
Sbjct: 45  TTTPPPPPPEIINSWELMEGL---DTESFRFSPLTPPSSKPSHKENTNPNLNLNLNLNPA 101

Query: 103 ------SVLERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDV 156
                 ++ +RFERICPP+GE KVVIYTTTLRG+R+T+EAC A ++  + FGV + ERDV
Sbjct: 102 LKKPGWTLSDRFERICPPNGEKKVVIYTTTLRGVRRTFEACNAVRAAFDAFGVQICERDV 161

Query: 157 SMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLR 216
           SMD GFKEELREL+                 E  V P     PRVFVKG Y+GGAEE+L+
Sbjct: 162 SMDSGFKEELRELL----------------KEKMVVP-----PRVFVKGYYIGGAEEMLK 200

Query: 217 IVEEGWFGELIEGIPIR--KLKGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRC 274
           +VEEG  GE+I+G+P +     GVC+GC D+RF PCFRCNGSCK+V N Q +G T  ++C
Sbjct: 201 VVEEGLLGEVIQGLPRKAVGGGGVCEGCGDMRFLPCFRCNGSCKMV-NKQKQGNTVVVKC 259

Query: 275 PDCNENGLVLCPLCS 289
            DCNENGLV CP+CS
Sbjct: 260 GDCNENGLVQCPICS 274

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147790454|emb|CAN76670.1| hypothetical protein VITISV_042863 [Vitis vinifera]

 Score =  224 bits (570), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 112/202 (55%), Positives = 147/202 (72%), Gaps = 26/202 (12%)

Query: 96  VNSAVIK---SVLERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVS 152
           +N +V++   ++L+ FER+CPP+GEN+VV+YTTTLRG+RKT+E C A ++ IE  GV++ 
Sbjct: 53  LNDSVLRQCLALLDGFERLCPPNGENRVVVYTTTLRGVRKTFEDCNAVRAAIEGLGVSLC 112

Query: 153 ERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAE 212
           ERD+SMDRGFKEELRELM               + + S Q +P   PRVFVKGRYVGGAE
Sbjct: 113 ERDISMDRGFKEELRELM---------------KGKDSCQMVP---PRVFVKGRYVGGAE 154

Query: 213 EVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCKLVINM-----QPRG 267
           EVL IVEEG  GEL++G+P  +   VC+GC  VR  PCF+CNGSCK+V+ +     Q +G
Sbjct: 155 EVLXIVEEGCLGELLQGLPKIRAGEVCEGCGGVRXLPCFQCNGSCKMVMMVKEEMEQKQG 214

Query: 268 KTAALRCPDCNENGLVLCPLCS 289
           ++  +RCPDCNENGLVLCP+CS
Sbjct: 215 RSVVVRCPDCNENGLVLCPICS 236

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	289
TAIR|locus:2139252	334	AT4G10630 [Arabidopsis thalian	0.577	0.5	0.531	2.6e-63
TAIR|locus:2035589	314	AT1G32760 [Arabidopsis thalian	0.332	0.305	0.543	6.4e-57
TAIR|locus:2150640	384	AT5G03870 [Arabidopsis thalian	0.304	0.229	0.537	2.4e-50
TAIR|locus:2080635	417	AT3G57070 [Arabidopsis thalian	0.311	0.215	0.414	7.1e-40
TAIR|locus:504954828	390	AT5G39865 [Arabidopsis thalian	0.314	0.233	0.41	1.2e-35
TAIR|locus:2040267	402	AT2G41330 [Arabidopsis thalian	0.311	0.223	0.414	4.2e-35
TAIR|locus:2164285	239	AT5G06470 [Arabidopsis thalian	0.307	0.372	0.425	3e-33
TAIR|locus:2019479	368	AT1G64500 [Arabidopsis thalian	0.307	0.241	0.446	1e-32
TAIR|locus:2159038	274	AT5G13810 [Arabidopsis thalian	0.304	0.321	0.456	3.8e-31
TAIR|locus:2171223	273	AT5G58530 [Arabidopsis thalian	0.314	0.333	0.454	3.8e-31

TAIR|locus:2139252 AT4G10630 [Arabidopsis thaliana (taxid:3702)]

 Score = 489 (177.2 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
 Identities = 100/188 (53%), Positives = 121/188 (64%)

Query:   106 ERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKXX 165
             E+FERICPP GEN+VV+YTT+LRG+R+T+EAC A ++ +E+FGV V ERDVSMDR F+  
Sbjct:   164 EKFERICPPGGENRVVMYTTSLRGVRQTFEACNAVRAAVESFGVVVCERDVSMDRRFREE 223

Query:   166 XXXXXXXXXXXXXXXXXXXXXXXXXVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGE 225
                                      V  LPP   RVFVKGRY+GG EEVLR+VEEG FGE
Sbjct:   224 LVSLMAKRVGDEG------------VAALPP---RVFVKGRYIGGGEEVLRLVEEGSFGE 268

Query:   226 LIEGIPIRKL----KGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENG 281
             LI GIP +K      G C GC  + F PCFRCNGSCK+V        +  +RC +CNENG
Sbjct:   269 LISGIPRKKAGGCESGACDGCGGLFFLPCFRCNGSCKMVKGWG--SASVVVRCNECNENG 326

Query:   282 LVLCPLCS 289
             LV CP+CS
Sbjct:   327 LVPCPICS 334

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

TAIR|locus:2035589 AT1G32760 [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 6.4e-57, Sum P(3) = 6.4e-57
 Identities = 56/103 (54%), Positives = 72/103 (69%)

Query:   191 VQPLPPVLP-RVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLK--GVCQGCADVRF 247
             V+    VLP RVFVKG+Y+GGAEEV+R+VEEG  GEL++ IP +K +  G C GC  + F
Sbjct:   215 VESTAAVLPPRVFVKGKYIGGAEEVMRLVEEGLLGELLKEIPRKKDRCGGGCGGCGGLAF 274

Query:   248 FPCFRCNGSCKLVINMQPRGKTAAL-RCPDCNENGLVLCPLCS 289
              PC  CNGSCK+V   +  G  A + +C +CNENGLV CP+CS
Sbjct:   275 LPCSGCNGSCKVV---EGWGNDAVVVKCKECNENGLVRCPICS 314

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2150640 AT5G03870 [Arabidopsis thaliana (taxid:3702)]

 Score = 259 (96.2 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
 Identities = 50/93 (53%), Positives = 63/93 (67%)

Query:   198 LPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKG-VCQGCADVRFFPCFRCNGS 256
             +P VFVKGR VG  EEV+R+ EEG  G L+EGIP  +L G  C+GC  +RF  C  CNGS
Sbjct:   296 IPAVFVKGRMVGSVEEVMRLEEEGKLGILLEGIPAARLGGSCCRGCGGMRFMMCVVCNGS 355

Query:   257 CKLVINMQPRGKTAALRCPDCNENGLVLCPLCS 289
             CK+    +   K + ++C  CNENGLVLCP+CS
Sbjct:   356 CKV----REEEKKSMVKCLKCNENGLVLCPICS 384

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2080635 AT3G57070 [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 7.1e-40, Sum P(3) = 7.1e-40
 Identities = 39/94 (41%), Positives = 57/94 (60%)

Query:   195 PPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCN 254
             P  LP+VF++G ++GG EE++++ + G   E+++  P  +  G C+ C D RF PC  C+
Sbjct:   326 PVCLPQVFIRGTHIGGVEEIMQLNDGGELAEMLKDFPACERLGTCRSCGDARFVPCTNCD 385

Query:   255 GSCKLVINMQPRGKTAALRCPDCNENGLVLCPLC 288
             GS K+      R K    RCP CNENGLV C +C
Sbjct:   386 GSTKVFEEQDERFK----RCPKCNENGLVRCRVC 415

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:504954828 AT5G39865 [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 1.2e-35, Sum P(4) = 1.2e-35
 Identities = 41/100 (41%), Positives = 56/100 (56%)

Query:   198 LPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRK-----LKGVCQGCADVRFFPCFR 252
             LPRVF+  +Y+GG EE+ ++ E G   +LI+   + +         C+ C DVRF PC  
Sbjct:   289 LPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGFGNECEACGDVRFVPCET 348

Query:   253 CNGSCKLVIN--MQPRGKT--AALRCPDCNENGLVLCPLC 288
             C+GSCKL      +  G T     RCP CNENGL+ C +C
Sbjct:   349 CSGSCKLYHEGEEEDEGVTEYGFQRCPYCNENGLIRCHVC 388

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2040267 AT2G41330 [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 4.2e-35, Sum P(3) = 4.2e-35
 Identities = 39/94 (41%), Positives = 50/94 (53%)

Query:   195 PPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCN 254
             P  LP+VF++G  +GG EE+  + + G   E+++  P  +  G C  C D RF PC  C 
Sbjct:   311 PVCLPQVFIRGVRIGGIEEIKILNDGGELAEMLKDFPACESIGACDSCGDARFVPCTNCG 370

Query:   255 GSCKLVINMQPRGKTAALRCPDCNENGLVLCPLC 288
             GS K V   Q  G     RC  CNENGLV C  C
Sbjct:   371 GSTK-VFEEQEDGFK---RCNGCNENGLVRCNKC 400

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2164285 AT5G06470 [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
 Identities = 40/94 (42%), Positives = 59/94 (62%)

Query:   199 PRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCK 258
             PR+F++GRY+GGAEEV+ + E G   +L++GI   ++   C+ C + RF  C  CNGS +
Sbjct:   148 PRLFIRGRYIGGAEEVVALNENGKLKKLLQGIS--QVDSPCESCENERFLICSSCNGSTR 205

Query:   259 LVI---NMQPRGKTAALRCPDCNENGLVLCPLCS 289
             L+    + +        RC +CNENGLV CPLC+
Sbjct:   206 LLAEHHDEESSNDNMWTRCRECNENGLVKCPLCT 239

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

TAIR|locus:2019479 AT1G64500 [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
 Identities = 42/94 (44%), Positives = 57/94 (60%)

Query:   199 PRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKL--KG--VCQGCADVRFFPCFRCN 254
             PRVFVKGRY+GGA EV  + E G  G ++    + ++  +G   C+GC   R+ PCF C 
Sbjct:   273 PRVFVKGRYLGGAAEVTAMNENGKLGRVLRWARVERVGEEGRLTCEGCGGARWLPCFECG 332

Query:   255 GSCKLVINMQPRGKTAALRCPDCNENGLVLCPLC 288
             GSCK+      +G+    RC  CNENGL+ CP+C
Sbjct:   333 GSCKVAAVGAAKGERWE-RCVKCNENGLIRCPVC 365

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0005884 "actin filament" evidence=IDA

GO:0009902 "chloroplast relocation" evidence=IMP

GO:0051017 "actin filament bundle assembly" evidence=IDA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2159038 AT5G13810 [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
 Identities = 42/92 (45%), Positives = 59/92 (64%)

Query:   198 LPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSC 257
             LP+VF+ G+YVGGA+ +  + E G   ++++  P+R+   VC  C D+RF PC  C+GS 
Sbjct:   186 LPQVFIMGKYVGGADVIKSLFEIGELAKILKEFPMRQPGFVCHCCGDIRFVPCSNCSGSK 245

Query:   258 KLVINMQPRGKTAALRCPDCNENGLVLCPLCS 289
             KL    + R K    RCP+CNENGL+ CP CS
Sbjct:   246 KLFDEDEDRVK----RCPECNENGLIRCPDCS 273

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

TAIR|locus:2171223 AT5G58530 [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
 Identities = 45/99 (45%), Positives = 60/99 (60%)

Query:   192 QPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLK-GVCQGCADVRFFPC 250
             Q   P LPRVF+ GRY+GGAEEV ++ E G   +L++ +P  K++ GVC+ C   RF PC
Sbjct:   175 QAKTPKLPRVFIGGRYIGGAEEVKQLHEIGELKKLVQELP--KIEPGVCEMCGGHRFVPC 232

Query:   251 FRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPLCS 289
               C+GS K  ++ +  G      C  CNENGLV C  CS
Sbjct:   233 KDCHGSHK--VHTEKLGFRT---CLTCNENGLVRCSSCS 266

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0048653 "anther development" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00000505001 SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (320 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	289
cd03031	147	cd03031, GRX_GRX_like, Glutaredoxin (GRX) family,	2e-63
cd02066	72	cd02066, GRX_family, Glutaredoxin (GRX) family; co	1e-14
pfam00462	60	pfam00462, Glutaredoxin, Glutaredoxin	2e-08
TIGR02181	79	TIGR02181, GRX_bact, Glutaredoxin, GrxC family	5e-06
cd03418	75	cd03418, GRX_GRXb_1_3_like, Glutaredoxin (GRX) fam	5e-06
cd03419	82	cd03419, GRX_GRXh_1_2_like, Glutaredoxin (GRX) fam	5e-04

>gnl|CDD|239329 cd03031, GRX_GRX_like, Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

 Score =  195 bits (499), Expect = 2e-63
 Identities = 83/168 (49%), Positives = 104/168 (61%), Gaps = 22/168 (13%)

Query: 119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSS 178
           +VV+YTT+LRG+RKT+E C   ++++E+F V   ERDVSMD GF+EELREL+    +   
Sbjct: 1   RVVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAELK--- 57

Query: 179 SSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGV 238
                              LPRVFV GRY+GGAEEVLR+ E G   +L++GI  R   GV
Sbjct: 58  ----------------AVSLPRVFVDGRYLGGAEEVLRLNESGELRKLLKGIRARAGGGV 101

Query: 239 CQGCADVRFFPCFRCNGSCKLVI-NMQPRGKTAALRCPDCNENGLVLC 285
           C+GC   RF PC  CNGSCK+   N    G    LRCP+CNENGLV C
Sbjct: 102 CEGCGGARFVPCSECNGSCKVFAENATAAGG--FLRCPECNENGLVRC 147

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive. Length = 147

>gnl|CDD|239017 cd02066, GRX_family, Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

 Score = 67.1 bits (165), Expect = 1e-14
 Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 29/101 (28%)

Query: 119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSS 178
           KVV+++ +      T   CK AK ++E+ G+   E D+  D   +EEL+EL         
Sbjct: 1   KVVVFSKS------TCPYCKRAKRLLESLGIEFEEIDILEDGELREELKEL--------- 45

Query: 179 SSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVE 219
            S               P +P++F+ G ++GG +++  + E
Sbjct: 46  -SGW-------------PTVPQIFINGEFIGGYDDLKALHE 72

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which are members of this family. E. coli GRX2, however, is a 24-kDa protein that belongs to the GSH S-transferase (GST) family. Length = 72

>gnl|CDD|215931 pfam00462, Glutaredoxin, Glutaredoxin

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 29/89 (32%)

Query: 120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSS 179
           VV++T        T   CK AK ++++ GV   E DV  D   +EEL+EL          
Sbjct: 1   VVLFTKP------TCPFCKRAKRLLDSLGVKFEEIDVDEDPEIREELKELSGWPT----- 49

Query: 180 SNNNEEEAESSVQPLPPVLPRVFVKGRYV 208
                             +P+VF+ G ++
Sbjct: 50  ------------------VPQVFIDGEHI 60

Length = 60

>gnl|CDD|233766 TIGR02181, GRX_bact, Glutaredoxin, GrxC family

 Score = 43.4 bits (103), Expect = 5e-06
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 29/102 (28%)

Query: 120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSS 179
           V IYT      +     C  AK+++ + GV  +E  V  D      LR+ MM+R  R + 
Sbjct: 1   VTIYT------KPYCPYCTRAKALLSSKGVTFTEIRVDGD----PALRDEMMQRSGRRT- 49

Query: 180 SNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEG 221
                             +P++F+   +VGG +++  +  EG
Sbjct: 50  ------------------VPQIFIGDVHVGGCDDLYALDREG 73

Glutaredoxins are thioltransferases (disulfide reductases) which utilize glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system. Glutaredoxins utilize the CXXC motif common to thioredoxins and are involved in multiple cellular processes including protection from redox stress, reduction of critical enzymes such as ribonucleotide reductase and the generation of reduced sulfur for iron sulfur cluster formation. Glutaredoxins are capable of reduction of mixed disulfides of glutathione as well as the formation of glutathione mixed disulfides. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides [Energy metabolism, Electron transport]. Length = 79

>gnl|CDD|239510 cd03418, GRX_GRXb_1_3_like, Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 32/105 (30%)

Query: 119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRR--RRR 176
           KV IYT            C  AK++++  GV   E DV  D      LRE M+ R   RR
Sbjct: 1   KVEIYTKPNCPY------CVRAKALLDKKGVDYEEIDVDGDP----ALREEMINRSGGRR 50

Query: 177 SSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEG 221
           +                    +P++F+   ++GG +++  +  +G
Sbjct: 51  T--------------------VPQIFIGDVHIGGCDDLYALERKG 75

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including E. coli GRX1 and GRX3, which are members of this subfamily. Length = 75

>gnl|CDD|239511 cd03419, GRX_GRXh_1_2_like, Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 34/112 (30%)

Query: 119 KVVIYTTTLRGIRKTY-EACKAAKSVIENFGV--AVSERDVSMD-RGFKEELRELMMRRR 174
            VV+++       K+Y   CK AKS+++  GV  AV E D   D    ++ L+EL  +R 
Sbjct: 1   PVVVFS-------KSYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQR- 52

Query: 175 RRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGEL 226
                          +V       P VF+ G+++GG ++++ + + G   +L
Sbjct: 53  ---------------TV-------PNVFIGGKFIGGCDDLMALHKSGKLVKL 82

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, which are members of this subfamily. Also included in this subfamily are the N-terminal GRX domains of proteins similar to human thioredoxin reductase 1 and 3. Length = 82

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	289
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	100.0
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	100.0
cd03030	92	GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3	99.91
TIGR00365	97	monothiol glutaredoxin, Grx4 family. The gene for	99.86
TIGR02189	99	GlrX-like_plant Glutaredoxin-like family. This fam	99.86
PHA03050	108	glutaredoxin; Provisional	99.85
PRK10824	115	glutaredoxin-4; Provisional	99.85
PRK10638	83	glutaredoxin 3; Provisional	99.83
cd03028	90	GRX_PICOT_like Glutaredoxin (GRX) family, PKC-inte	99.82
TIGR02181	79	GRX_bact Glutaredoxin, GrxC family. This family of	99.82
cd03418	75	GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX b	99.78
cd03027	73	GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Eg	99.77
PTZ00062	204	glutaredoxin; Provisional	99.75
KOG1752	104	consensus Glutaredoxin and related proteins [Postt	99.75
TIGR02180	84	GRX_euk Glutaredoxin. This model represents eukary	99.72
COG0695	80	GrxC Glutaredoxin and related proteins [Posttransl	99.69
cd03419	82	GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX h	99.69
cd03029	72	GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hyb	99.68
PF04908	99	SH3BGR: SH3-binding, glutamic acid-rich protein; I	99.68
TIGR02190	79	GlrX-dom Glutaredoxin-family domain. This C-termin	99.67
cd02066	72	GRX_family Glutaredoxin (GRX) family; composed of	99.66
PRK11200	85	grxA glutaredoxin 1; Provisional	99.66
TIGR02183	86	GRXA Glutaredoxin, GrxA family. This model include	99.65
COG0278	105	Glutaredoxin-related protein [Posttranslational mo	99.65
PF00462	60	Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Gl	99.57
PRK12759	410	bifunctional gluaredoxin/ribonucleoside-diphosphat	99.55
KOG0911	227	consensus Glutaredoxin-related protein [Posttransl	99.48
PRK10329	81	glutaredoxin-like protein; Provisional	99.42
TIGR02194	72	GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-red	99.41
TIGR02196	74	GlrX_YruB Glutaredoxin-like protein, YruB-family.	99.13
cd02976	73	NrdH NrdH-redoxin (NrdH) family; NrdH is a small m	99.08
TIGR02200	77	GlrX_actino Glutaredoxin-like protein. This family	98.87
KOG4023	108	consensus Uncharacterized conserved protein [Funct	98.82
cd02973	67	TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-	98.65
cd03041	77	GST_N_2GST_N GST_N family, 2 repeats of the N-term	98.53
cd03040	77	GST_N_mPGES2 GST_N family; microsomal Prostaglandi	98.44
cd00570	71	GST_N_family Glutathione S-transferase (GST) famil	98.34
cd03037	71	GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) sub	98.32
cd03036	111	ArsC_like Arsenate Reductase (ArsC) family, unknow	98.29
cd02977	105	ArsC_family Arsenate Reductase (ArsC) family; comp	98.28
cd03055	89	GST_N_Omega GST_N family, Class Omega subfamily; G	98.16
PRK01655	131	spxA transcriptional regulator Spx; Reviewed	98.15
cd03059	73	GST_N_SspA GST_N family, Stringent starvation prot	98.1
TIGR01617	117	arsC_related transcriptional regulator, Spx/MgsR f	98.03
cd03032	115	ArsC_Spx Arsenate Reductase (ArsC) family, Spx sub	98.0
cd03060	71	GST_N_Omega_like GST_N family, Omega-like subfamil	97.92
PRK12559	131	transcriptional regulator Spx; Provisional	97.92
cd03051	74	GST_N_GTT2_like GST_N family, Saccharomyces cerevi	97.91
PRK13344	132	spxA transcriptional regulator Spx; Reviewed	97.91
cd03035	105	ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb s	97.89
PF13417	75	GST_N_3: Glutathione S-transferase, N-terminal dom	97.86
cd03045	74	GST_N_Delta_Epsilon GST_N family, Class Delta and	97.81
cd03033	113	ArsC_15kD Arsenate Reductase (ArsC) family, 15kD p	97.77
PF05768	81	DUF836: Glutaredoxin-like domain (DUF836); InterPr	97.7
TIGR00411	82	redox_disulf_1 small redox-active disulfide protei	97.68
cd03056	73	GST_N_4 GST_N family, unknown subfamily 4; compose	97.66
cd03054	72	GST_N_Metaxin GST_N family, Metaxin subfamily; com	97.35
COG1393	117	ArsC Arsenate reductase and related proteins, glut	97.33
cd03058	74	GST_N_Tau GST_N family, Class Tau subfamily; GSTs	97.27
cd03034	112	ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC s	97.25
PHA02125	75	thioredoxin-like protein	97.25
cd02975	113	PfPDO_like_N Pyrococcus furiosus protein disulfide	97.25
cd03053	76	GST_N_Phi GST_N family, Class Phi subfamily; compo	97.24
TIGR00014	114	arsC arsenate reductase (glutaredoxin). composed o	97.24
PRK10026	141	arsenate reductase; Provisional	97.22
KOG3029	370	consensus Glutathione S-transferase-related protei	97.21
cd03026	89	AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxid	97.19
cd03052	73	GST_N_GDAP1 GST_N family, Ganglioside-induced diff	97.13
PRK10853	118	putative reductase; Provisional	97.12
TIGR01616	126	nitro_assoc nitrogenase-associated protein. This m	97.12
cd03061	91	GST_N_CLIC GST_N family, Chloride Intracellular Ch	97.08
cd03042	73	GST_N_Zeta GST_N family, Class Zeta subfamily; GST	97.04
TIGR00412	76	redox_disulf_2 small redox-active disulfide protei	97.04
PF13192	76	Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZY	96.95
cd03076	73	GST_N_Pi GST_N family, Class Pi subfamily; GSTs ar	96.87
cd03039	72	GST_N_Sigma_like GST_N family, Class Sigma_like; c	96.8
cd03049	73	GST_N_3 GST_N family, unknown subfamily 3; compose	96.78
cd03048	81	GST_N_Ure2p_like GST_N family, Ure2p-like subfamil	96.78
COG4545	85	Glutaredoxin-related protein [Posttranslational mo	96.77
PRK10387	210	glutaredoxin 2; Provisional	96.75
TIGR02182	209	GRXB Glutaredoxin, GrxB family. This model include	96.65
PF03960	110	ArsC: ArsC family; InterPro: IPR006660 Several bac	96.47
PLN03165	111	chaperone protein dnaJ-related; Provisional	96.42
TIGR01295	122	PedC_BrcD bacteriocin transport accessory protein,	96.3
cd03080	75	GST_N_Metaxin_like GST_N family, Metaxin subfamily	96.28
cd03050	76	GST_N_Theta GST_N family, Class Theta subfamily; c	96.23
cd03038	84	GST_N_etherase_LigE GST_N family, Beta etherase Li	96.2
cd01659	69	TRX_superfamily Thioredoxin (TRX) superfamily; a l	96.17
cd03043	73	GST_N_1 GST_N family, unknown subfamily 1; compose	96.02
PRK09481	211	sspA stringent starvation protein A; Provisional	95.99
cd03044	75	GST_N_EF1Bgamma GST_N family, Gamma subunit of Elo	95.96
cd02949	97	TRX_NTR TRX domain, novel NADPH thioredoxin reduct	95.74
cd02947	93	TRX_family TRX family; composed of two groups: Gro	95.7
cd03046	76	GST_N_GTT1_like GST_N family, Saccharomyces cerevi	95.68
TIGR00862	236	O-ClC intracellular chloride channel protein. Thes	95.59
PF13409	70	GST_N_2: Glutathione S-transferase, N-terminal dom	95.57
cd02953	104	DsbDgamma DsbD gamma family; DsbD gamma is the C-t	95.45
cd03057	77	GST_N_Beta GST_N family, Class Beta subfamily; GST	95.43
cd03047	73	GST_N_2 GST_N family, unknown subfamily 2; compose	95.32
TIGR02187	215	GlrX_arch Glutaredoxin-like domain protein. This f	95.31
TIGR02187	215	GlrX_arch Glutaredoxin-like domain protein. This f	94.93
TIGR03140	515	AhpF alkyl hydroperoxide reductase, F subunit. Thi	94.92
PRK15317	517	alkyl hydroperoxide reductase subunit F; Provision	94.58
PHA02278	103	thioredoxin-like protein	94.46
PRK15113	214	glutathione S-transferase; Provisional	93.85
PTZ00051	98	thioredoxin; Provisional	93.79
TIGR03143	555	AhpF_homolog putative alkyl hydroperoxide reductas	93.62
TIGR01262	210	maiA maleylacetoacetate isomerase. Maleylacetoacet	93.6
PLN02473	214	glutathione S-transferase	93.29
PF00085	103	Thioredoxin: Thioredoxin; InterPro: IPR013766 Thio	93.24
PLN02817	265	glutathione dehydrogenase (ascorbate)	93.05
cd02989	113	Phd_like_TxnDC9 Phosducin (Phd)-like family, Thior	93.03
cd03077	79	GST_N_Alpha GST_N family, Class Alpha subfamily; G	93.02
cd02957	113	Phd_like Phosducin (Phd)-like family; composed of	92.94
KOG0406	231	consensus Glutathione S-transferase [Posttranslati	92.64
cd02985	103	TRX_CDSP32 TRX family, chloroplastic drought-induc	92.61
cd02951	125	SoxW SoxW family; SoxW is a bacterial periplasmic	92.57
TIGR01126	102	pdi_dom protein disulfide-isomerase domain. This m	92.54
cd02954	114	DIM1 Dim1 family; Dim1 is also referred to as U5 s	92.51
TIGR01068	101	thioredoxin thioredoxin. Several proteins, such as	92.41
PLN02378	213	glutathione S-transferase DHAR1	92.4
cd02994	101	PDI_a_TMX PDIa family, TMX subfamily; composed of	92.33
PRK10877	232	protein disulfide isomerase II DsbC; Provisional	92.16
PRK09381	109	trxA thioredoxin; Provisional	91.84
COG3019	149	Predicted metal-binding protein [General function	90.97
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	90.4
PF06953	123	ArsD: Arsenical resistance operon trans-acting rep	90.36
cd02948	102	TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fus	90.26
cd02984	97	TRX_PICOT TRX domain, PICOT (for PKC-interacting c	90.2
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	90.06
cd02956	96	ybbN ybbN protein family; ybbN is a hypothetical p	90.05
KOG0910	150	consensus Thioredoxin-like protein [Posttranslatio	89.93
PF11009	105	DUF2847: Protein of unknown function (DUF2847); In	89.62
PF13098	112	Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_	89.42
PRK10357	202	putative glutathione S-transferase; Provisional	89.24
cd03079	74	GST_N_Metaxin2 GST_N family, Metaxin subfamily, Me	88.91
cd03020	197	DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamil	88.9
cd02962	152	TMX2 TMX2 family; composed of proteins similar to	88.8
cd02961	101	PDI_a_family Protein Disulfide Isomerase (PDIa) fa	88.7
PLN02395	215	glutathione S-transferase	88.52
cd03004	104	PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfam	88.24
PRK10767	371	chaperone protein DnaJ; Provisional	88.0
PRK13972	215	GSH-dependent disulfide bond oxidoreductase; Provi	87.84
cd02972	98	DsbA_family DsbA family; consists of DsbA and DsbA	87.79
cd02959	117	ERp19 Endoplasmic reticulum protein 19 (ERp19) fam	87.74
cd03078	73	GST_N_Metaxin1_like GST_N family, Metaxin subfamil	87.67
COG0625	211	Gst Glutathione S-transferase [Posttranslational m	87.42
cd02965	111	HyaE HyaE family; HyaE is also called HupG and Hox	87.37
PTZ00057	205	glutathione s-transferase; Provisional	87.28
KOG1422	221	consensus Intracellular Cl- channel CLIC, contains	87.13
PRK14300	372	chaperone protein DnaJ; Provisional	87.03
cd02996	108	PDI_a_ERp44 PDIa family, endoplasmic reticulum pro	86.92
cd02963	111	TRX_DnaJ TRX domain, DnaJ domain containing protei	86.91
cd02987	175	Phd_like_Phd Phosducin (Phd)-like family, Phd subf	86.58
PF02798	76	GST_N: Glutathione S-transferase, N-terminal domai	86.3
PRK10996	139	thioredoxin 2; Provisional	86.0
COG0178	935	UvrA Excinuclease ATPase subunit [DNA replication,	85.98
cd03001	103	PDI_a_P5 PDIa family, P5 subfamily; composed of eu	85.97
PF13901	202	DUF4206: Domain of unknown function (DUF4206)	84.85
PRK14284	391	chaperone protein DnaJ; Provisional	84.57
cd02952	119	TRP14_like Human TRX-related protein 14 (TRP14)-li	84.43
PRK14285	365	chaperone protein DnaJ; Provisional	84.14
PRK14298	377	chaperone protein DnaJ; Provisional	84.04
cd03003	101	PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfam	83.94
cd02998	105	PDI_a_ERp38 PDIa family, endoplasmic reticulum pro	83.69
PRK14295	389	chaperone protein DnaJ; Provisional	83.63
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	83.43
PRK14287	371	chaperone protein DnaJ; Provisional	83.42
PRK14290	365	chaperone protein DnaJ; Provisional	83.25
cd03002	109	PDI_a_MPD1_like PDI family, MPD1-like subfamily; c	82.8
cd03065	120	PDI_b_Calsequestrin_N PDIb family, Calsequestrin s	82.76
PRK14292	371	chaperone protein DnaJ; Provisional	82.72
PRK14286	372	chaperone protein DnaJ; Provisional	82.58
PRK14282	369	chaperone protein DnaJ; Provisional	82.45
PRK14301	373	chaperone protein DnaJ; Provisional	82.2
PRK14291	382	chaperone protein DnaJ; Provisional	82.18
KOG2813	406	consensus Predicted molecular chaperone, contains	82.06
PRK14294	366	chaperone protein DnaJ; Provisional	82.05
COG2999	215	GrxB Glutaredoxin 2 [Posttranslational modificatio	81.9
cd03005	102	PDI_a_ERp46 PDIa family, endoplasmic reticulum pro	81.53
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	81.47
cd02950	142	TxlA TRX-like protein A (TxlA) family; TxlA was or	81.44
PRK14285	365	chaperone protein DnaJ; Provisional	81.33
PRK14288	369	chaperone protein DnaJ; Provisional	81.31
PRK14289	386	chaperone protein DnaJ; Provisional	80.97
PRK14296	372	chaperone protein DnaJ; Provisional	80.71
cd02999	100	PDI_a_ERp44_like PDIa family, endoplasmic reticulu	80.62
PRK14873	665	primosome assembly protein PriA; Provisional	80.32
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	80.29
PRK11752	264	putative S-transferase; Provisional	80.22
PRK14280	376	chaperone protein DnaJ; Provisional	80.03

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=8.5e-68  Score=489.22  Aligned_cols=236  Identities=52%  Similarity=0.937  Sum_probs=196.7

Q ss_pred             eEEEeecccccccccCCCCCCCCCCCCccccCCCC--------CCCCCcccccchhhhhcccCCCCcchhccc-------
Q 041824           26 HIVSLTSTTYGLLNVDPPATTPPTRPQRFTLGSIL--------PGEPVRAEVINSWELMSGLGESDNNSLRKA-------   90 (289)
Q Consensus        26 h~v~lts~t~g~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~e~in~welm~gl~~~~~~~~~~~-------   90 (289)
                      |+|+|||||||+|.|      |+++|+|++.....        ..++..||+||+||||.+|+++...+++-+       
T Consensus         1 ~~~~lts~~~~~l~~------~~~~p~~~~~~~k~~~~~~~~~~~~~~~~~~i~s~e~~~~l~~~~~~~~~~p~~~~~~~   74 (281)
T KOG2824|consen    1 HIVSLTSTTYGLLVL------PMTLPPRVTVSGKESKIAPIRDSSSPTGPEVINSWELMLDLDDELHRSCKTPITPTSVS   74 (281)
T ss_pred             Ccccccchhhhheec------cccCCcceecccccccccccccCCCCCchhhhhhhhhccCccccccccccCCCCCcccc
Confidence            899999999999998      66777777775541        234456799999999999998553211111       


Q ss_pred             ------cC----C---------CCC--ch----HHHH----HHHHHhhhcCCCCCCCcEEEEEecCCCCCCCCHHHHHHH
Q 041824           91 ------KE----N---------PSV--NS----AVIK----SVLERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAK  141 (289)
Q Consensus        91 ------~~----~---------~~~--~~----~~~~----~~l~~f~~~~pp~~~~kVVVYttSLrgvR~tC~~C~~ak  141 (289)
                            ..    +         |..  .+    +...    ..+..|+++|||+++++||||+|||||||+||++|..||
T Consensus        75 ~~~~~~~~~~~s~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~Pgge~~VVvY~TsLRgvRkTfE~C~~VR  154 (281)
T KOG2824|consen   75 LRVKALNLLGKSKGSWPPVILKPEKRLSSESGLKELDKSPNKLLLEFKEVCPPGGEDRVVVYTTSLRGVRKTFEDCNAVR  154 (281)
T ss_pred             cccccccccccccCcCCcccccccccccccccccccccccccchhhhhhcCCCCCCceEEEEEcccchhhhhHHHHHHHH
Confidence                  00    0         111  00    1111    477899999999999999999999999999999999999


Q ss_pred             HHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEEEECCeEEechHHHHHHHHhC
Q 041824          142 SVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEG  221 (289)
Q Consensus       142 ~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI~G~~IGG~del~~L~E~G  221 (289)
                      +||++++|.|+||||+||.+|++||++++|..                   ....+||+|||+|+||||+++|++|||.|
T Consensus       155 ~ilesf~V~v~ERDVSMd~~fr~EL~~~lg~~-------------------~~~~~LPrVFV~GryIGgaeeV~~LnE~G  215 (281)
T KOG2824|consen  155 AILESFRVKVDERDVSMDSEFREELQELLGED-------------------EKAVSLPRVFVKGRYIGGAEEVVRLNEEG  215 (281)
T ss_pred             HHHHhCceEEEEecccccHHHHHHHHHHHhcc-------------------cccCccCeEEEccEEeccHHHhhhhhhcc
Confidence            99999999999999999999999999999873                   12357899999999999999999999999


Q ss_pred             cHHHHhccCCCcccCCcccCCCCceeEeCCCCCCcceeeeccCCCCccccccCCccCcCCcccCCCCC
Q 041824          222 WFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPLCS  289 (289)
Q Consensus       222 ~L~~lL~~~~~~~~~~~C~~Cgg~rfvpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLvrCp~C~  289 (289)
                      +|.+||+++| .....+|++|||.||+||..||||||++.+.  ..+..++||++||||||||||+|+
T Consensus       216 kL~~lL~~~p-~~~~~~C~~CGg~rFlpC~~C~GS~kv~~~~--~~~~~~~rC~~CNENGLvrCp~Cs  280 (281)
T KOG2824|consen  216 KLGKLLKGIP-CEGGGVCESCGGARFLPCSNCHGSCKVHEEE--EDDGGVLRCLECNENGLVRCPVCS  280 (281)
T ss_pred             hHHHHHhcCC-CCCCCcCCCcCCcceEecCCCCCceeeeeec--cCCCcEEECcccCCCCceeCCccC
Confidence            9999999999 3356899999999999999999999999853  223459999999999999999996

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=100.00  E-value=1.9e-51  Score=352.34  Aligned_cols=147  Identities=54%  Similarity=1.009  Sum_probs=135.1

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +||||||||+|||+||++|++||+||++++|+|+|+||+||+++++||+++++..                +++.++   
T Consensus         1 ~VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~~~~~~EL~~~~g~~----------------~~~~tv---   61 (147)
T cd03031           1 RVVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAE----------------LKAVSL---   61 (147)
T ss_pred             CEEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCC----------------CCCCCC---
Confidence            5999999999999999999999999999999999999999999999999998753                123345   


Q ss_pred             CEEEECCeEEechHHHHHHHHhCcHHHHhccCCCcccCCcccCCCCceeEeCCCCCCcceeeeccCCCCccccccCCccC
Q 041824          199 PRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRKLKGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCN  278 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~~~~~~~C~~Cgg~rfvpC~~C~GS~K~~~~~~~~g~~~~~rC~~CN  278 (289)
                      |||||+|+||||+|++++|||+|+|+++|++++.......|++|||.|||||..||||+|++.++.+ +...++||++||
T Consensus        62 PqVFI~G~~IGG~del~~L~e~G~L~~lL~~~~~~~~~~~C~~Cgg~rfv~C~~C~Gs~k~~~~~~~-~~~~~~rC~~Cn  140 (147)
T cd03031          62 PRVFVDGRYLGGAEEVLRLNESGELRKLLKGIRARAGGGVCEGCGGARFVPCSECNGSCKVFAENAT-AAGGFLRCPECN  140 (147)
T ss_pred             CEEEECCEEEecHHHHHHHHHcCCHHHHHhhcccccCCCCCCCCCCcCeEECCCCCCcceEEeccCc-ccccEEECCCCC
Confidence            9999999999999999999999999999999988877889999999999999999999999988642 335689999999


Q ss_pred             cCCcccC
Q 041824          279 ENGLVLC  285 (289)
Q Consensus       279 ENGLvrC  285 (289)
                      |||||||
T Consensus       141 engl~~c  147 (147)
T cd03031         141 ENGLVRC  147 (147)
T ss_pred             ccccccC
Confidence            9999999

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif

Probab=99.91  E-value=3.6e-24  Score=170.75  Aligned_cols=90  Identities=21%  Similarity=0.384  Sum_probs=83.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      |+||+||++|+|++...|++++++|++++|+|+|+||++|++.++||+++++..                .+..++   |
T Consensus         2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d~~~r~em~~~~~~~----------------~g~~tv---P   62 (92)
T cd03030           2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMNEENRQWMRENVPNE----------------NGKPLP---P   62 (92)
T ss_pred             EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCCHHHHHHHHHhcCCC----------------CCCCCC---C
Confidence            899999999999999999999999999999999999999999999999998641                012355   9


Q ss_pred             EEEECCeEEechHHHHHHHHhCcHHHHhc
Q 041824          200 RVFVKGRYVGGAEEVLRIVEEGWFGELIE  228 (289)
Q Consensus       200 qIFI~G~~IGG~del~~L~E~G~L~~lL~  228 (289)
                      ||||||+||||+|++.+|+++|+|+++|+
T Consensus        63 QIFi~~~~iGg~ddl~~l~e~g~L~~lLk   91 (92)
T cd03030          63 QIFNGDEYCGDYEAFFEAKENNTLEEFLK   91 (92)
T ss_pred             EEEECCEEeeCHHHHHHHHhCCCHHHHhC
Confidence            99999999999999999999999999986

The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.

>TIGR00365 monothiol glutaredoxin, Grx4 family

Probab=99.86  E-value=2.5e-21  Score=154.49  Aligned_cols=89  Identities=22%  Similarity=0.368  Sum_probs=78.7

Q ss_pred             CCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          115 DGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       115 ~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      ..+++||||+++. --+.+|++|.+||++|+.+||+|+++||..+++.+++|+++.|..                    +
T Consensus         9 i~~~~Vvvf~kg~-~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~~tg~~--------------------t   67 (97)
T TIGR00365         9 IKENPVVLYMKGT-PQFPQCGFSARAVQILKACGVPFAYVNVLEDPEIRQGIKEYSNWP--------------------T   67 (97)
T ss_pred             hccCCEEEEEccC-CCCCCCchHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhCCC--------------------C
Confidence            3578999999853 123489999999999999999999999999999999999887643                    5


Q ss_pred             CCCCCEEEECCeEEechHHHHHHHHhCcHHHHh
Q 041824          195 PPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELI  227 (289)
Q Consensus       195 v~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL  227 (289)
                      +   |||||||++|||+|++.+|+++|+|.++|
T Consensus        68 v---P~vfi~g~~iGG~ddl~~l~~~g~L~~~l   97 (97)
T TIGR00365        68 I---PQLYVKGEFVGGCDIIMEMYQSGELQTLL   97 (97)
T ss_pred             C---CEEEECCEEEeChHHHHHHHHCcChHHhC
Confidence            6   99999999999999999999999999886

The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.

>TIGR02189 GlrX-like_plant Glutaredoxin-like family

Probab=99.86  E-value=2.3e-21  Score=155.17  Aligned_cols=87  Identities=26%  Similarity=0.468  Sum_probs=74.8

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHH---HHHHHHcccccccCCCCCcchhhccCCC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKE---ELRELMMRRRRRSSSSNNNEEEAESSVQ  192 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~re---EL~~llg~~~~~~~~s~~~~~~g~~t~~  192 (289)
                      .+++|+||+++      +||+|.+||++|+++||+|+++||+.+++..+   ++.+++|                    +
T Consensus         6 ~~~~Vvvysk~------~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg--------------------~   59 (99)
T TIGR02189         6 SEKAVVIFSRS------SCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGC--------------------S   59 (99)
T ss_pred             ccCCEEEEECC------CCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcC--------------------C
Confidence            46889999999      99999999999999999999999998866443   3444333                    3


Q ss_pred             CCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCC
Q 041824          193 PLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIP  231 (289)
Q Consensus       193 ~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~  231 (289)
                      .++   |||||||++|||+|++.+|+++|+|+++|+.+.
T Consensus        60 ~tv---P~Vfi~g~~iGG~ddl~~l~~~G~L~~~l~~~~   95 (99)
T TIGR02189        60 PAV---PAVFVGGKLVGGLENVMALHISGSLVPMLKQAG   95 (99)
T ss_pred             CCc---CeEEECCEEEcCHHHHHHHHHcCCHHHHHHHhC
Confidence            356   999999999999999999999999999997653

This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.

>PHA03050 glutaredoxin; Provisional

Probab=99.85  E-value=8e-21  Score=154.98  Aligned_cols=88  Identities=23%  Similarity=0.462  Sum_probs=79.6

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCC---cEEEEEcCC---ChhHHHHHHHHHcccccccCCCCCcchhhcc
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGV---AVSERDVSM---DRGFKEELRELMMRRRRRSSSSNNNEEEAES  189 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV---~y~ErDVs~---d~~~reEL~~llg~~~~~~~~s~~~~~~g~~  189 (289)
                      .+++|+||+++      +||||.+||++|+.++|   .|+++||+.   +.+.+++|.+++|.+                
T Consensus        11 ~~~~V~vys~~------~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~~----------------   68 (108)
T PHA03050         11 ANNKVTIFVKF------TCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGR----------------   68 (108)
T ss_pred             ccCCEEEEECC------CChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCCC----------------
Confidence            46789999999      99999999999999999   799999986   567899999987753                


Q ss_pred             CCCCCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCCC
Q 041824          190 SVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPI  232 (289)
Q Consensus       190 t~~~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~  232 (289)
                          ++   |+|||||++|||+|++++|+++|+|.++|+.+..
T Consensus        69 ----tV---P~IfI~g~~iGG~ddl~~l~~~g~L~~~l~~~~~  104 (108)
T PHA03050         69 ----TV---PRIFFGKTSIGGYSDLLEIDNMDALGDILSSIGV  104 (108)
T ss_pred             ----Cc---CEEEECCEEEeChHHHHHHHHcCCHHHHHHHccc
Confidence                56   9999999999999999999999999999987643

>PRK10824 glutaredoxin-4; Provisional

Probab=99.85  E-value=6e-21  Score=158.13  Aligned_cols=92  Identities=21%  Similarity=0.345  Sum_probs=81.4

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      .+++||||+++- -...+|+||.+|+++|+.+||+|.++||..+.+.+++|++++|.                    +|+
T Consensus        13 ~~~~Vvvf~Kg~-~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~d~~~~~~l~~~sg~--------------------~TV   71 (115)
T PRK10824         13 AENPILLYMKGS-PKLPSCGFSAQAVQALSACGERFAYVDILQNPDIRAELPKYANW--------------------PTF   71 (115)
T ss_pred             hcCCEEEEECCC-CCCCCCchHHHHHHHHHHcCCCceEEEecCCHHHHHHHHHHhCC--------------------CCC
Confidence            468899999951 12348999999999999999999999999999999999988764                    366


Q ss_pred             CCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCC
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIP  231 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~  231 (289)
                         |||||||+||||+|++.+|+++|+|+++|+.+.
T Consensus        72 ---PQIFI~G~~IGG~ddl~~l~~~G~L~~lL~~~~  104 (115)
T PRK10824         72 ---PQLWVDGELVGGCDIVIEMYQRGELQQLIKETA  104 (115)
T ss_pred             ---CeEEECCEEEcChHHHHHHHHCCCHHHHHHHHH
Confidence               999999999999999999999999999998654

>PRK10638 glutaredoxin 3; Provisional

Probab=99.83  E-value=6.5e-20  Score=140.64  Aligned_cols=83  Identities=25%  Similarity=0.455  Sum_probs=76.2

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      |.+|+||+++      +|++|++|+.+|+.+||+|+++||+.+++.++++.++.|..                    ++ 
T Consensus         1 m~~v~ly~~~------~Cp~C~~a~~~L~~~gi~y~~~dv~~~~~~~~~l~~~~g~~--------------------~v-   53 (83)
T PRK10638          1 MANVEIYTKA------TCPFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIKRSGRT--------------------TV-   53 (83)
T ss_pred             CCcEEEEECC------CChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhCCC--------------------Cc-
Confidence            3579999999      99999999999999999999999999988888988877643                    45 


Q ss_pred             CCCEEEECCeEEechHHHHHHHHhCcHHHHhc
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVEEGWFGELIE  228 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~  228 (289)
                        |+|||||++|||++++.+|+++|+|.++|+
T Consensus        54 --P~i~~~g~~igG~~~~~~~~~~g~l~~~~~   83 (83)
T PRK10638         54 --PQIFIDAQHIGGCDDLYALDARGGLDPLLK   83 (83)
T ss_pred             --CEEEECCEEEeCHHHHHHHHHcCCHHHHhC
Confidence              999999999999999999999999999985

>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins

Probab=99.82  E-value=4.5e-20  Score=144.54  Aligned_cols=85  Identities=22%  Similarity=0.361  Sum_probs=75.2

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      .+++||||+++.. ...+|++|.+|+++|+++||+|+++||..|++++++|+++.|..                    ++
T Consensus         6 ~~~~vvvf~k~~~-~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~~~g~~--------------------tv   64 (90)
T cd03028           6 KENPVVLFMKGTP-EEPRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNWP--------------------TF   64 (90)
T ss_pred             ccCCEEEEEcCCC-CCCCCcHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHhCCC--------------------CC
Confidence            4688999998521 23399999999999999999999999999999999999987753                    55


Q ss_pred             CCCCEEEECCeEEechHHHHHHHHhCcHH
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVEEGWFG  224 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E~G~L~  224 (289)
                         |+|||||++|||++++++||++|+|+
T Consensus        65 ---P~vfi~g~~iGG~~~l~~l~~~g~L~   90 (90)
T cd03028          65 ---PQLYVNGELVGGCDIVKEMHESGELQ   90 (90)
T ss_pred             ---CEEEECCEEEeCHHHHHHHHHcCCcC
Confidence               99999999999999999999999984

The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein

>TIGR02181 GRX_bact Glutaredoxin, GrxC family

Probab=99.82  E-value=6.6e-20  Score=138.25  Aligned_cols=79  Identities=29%  Similarity=0.507  Sum_probs=73.4

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      |+||+++      +|++|.+|+++|+++||+|+++||+++++.++++.++.|..                    ++   |
T Consensus         1 v~ly~~~------~Cp~C~~a~~~L~~~~i~~~~~di~~~~~~~~~~~~~~g~~--------------------~v---P   51 (79)
T TIGR02181         1 VTIYTKP------YCPYCTRAKALLSSKGVTFTEIRVDGDPALRDEMMQRSGRR--------------------TV---P   51 (79)
T ss_pred             CEEEecC------CChhHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHHhCCC--------------------Cc---C
Confidence            6899999      99999999999999999999999999999999998876632                    45   9


Q ss_pred             EEEECCeEEechHHHHHHHHhCcHHHHh
Q 041824          200 RVFVKGRYVGGAEEVLRIVEEGWFGELI  227 (289)
Q Consensus       200 qIFI~G~~IGG~del~~L~E~G~L~~lL  227 (289)
                      +|||+|++|||++++.+|+++|+|+++|
T Consensus        52 ~i~i~g~~igg~~~~~~~~~~g~l~~~l   79 (79)
T TIGR02181        52 QIFIGDVHVGGCDDLYALDREGKLDPLL   79 (79)
T ss_pred             EEEECCEEEcChHHHHHHHHcCChhhhC
Confidence            9999999999999999999999999886

This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.

>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=99.78  E-value=2e-18  Score=127.97  Aligned_cols=75  Identities=29%  Similarity=0.499  Sum_probs=67.9

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +|+||+++      +|++|.+|+++|+++||+|+++||+++++.++++.+..|..                   .++   
T Consensus         1 ~i~ly~~~------~Cp~C~~ak~~L~~~~i~~~~i~i~~~~~~~~~~~~~~~~~-------------------~~v---   52 (75)
T cd03418           1 KVEIYTKP------NCPYCVRAKALLDKKGVDYEEIDVDGDPALREEMINRSGGR-------------------RTV---   52 (75)
T ss_pred             CEEEEeCC------CChHHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCC-------------------Ccc---
Confidence            58999999      99999999999999999999999999988888888776642                   134   


Q ss_pred             CEEEECCeEEechHHHHHHHHhC
Q 041824          199 PRVFVKGRYVGGAEEVLRIVEEG  221 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E~G  221 (289)
                      |+|||+|++|||++++++|+++|
T Consensus        53 P~v~i~g~~igg~~~~~~~~~~g   75 (75)
T cd03418          53 PQIFIGDVHIGGCDDLYALERKG   75 (75)
T ss_pred             CEEEECCEEEeChHHHHHHHhCc
Confidence            99999999999999999999987

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i

>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions

Probab=99.77  E-value=2.4e-18  Score=128.60  Aligned_cols=73  Identities=25%  Similarity=0.432  Sum_probs=67.2

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .+|+||+++      +|++|++|+++|+.+||+|+++||.+++..+++|+++++..                    ++  
T Consensus         1 ~~v~ly~~~------~C~~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~~g~~--------------------~v--   52 (73)
T cd03027           1 GRVTIYSRL------GCEDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTGSS--------------------VV--   52 (73)
T ss_pred             CEEEEEecC------CChhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCC--------------------Cc--
Confidence            369999999      99999999999999999999999999999999999987643                    45  


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                       |+|||||++|||++||.+|+|
T Consensus        53 -P~v~i~~~~iGg~~~~~~~~~   73 (73)
T cd03027          53 -PQIFFNEKLVGGLTDLKSLEE   73 (73)
T ss_pred             -CEEEECCEEEeCHHHHHhhcC
Confidence             999999999999999999874

GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.

>PTZ00062 glutaredoxin; Provisional

Probab=99.75  E-value=5.3e-18  Score=152.64  Aligned_cols=91  Identities=18%  Similarity=0.329  Sum_probs=79.8

Q ss_pred             CCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          115 DGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       115 ~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      -..++||||+++.+ ...+|++|++++++|+.+||+|.++||..|++.+++|+++.|.                    .+
T Consensus       110 i~~~~Vvvf~Kg~~-~~p~C~~C~~~k~~L~~~~i~y~~~DI~~d~~~~~~l~~~sg~--------------------~T  168 (204)
T PTZ00062        110 IRNHKILLFMKGSK-TFPFCRFSNAVVNMLNSSGVKYETYNIFEDPDLREELKVYSNW--------------------PT  168 (204)
T ss_pred             HhcCCEEEEEccCC-CCCCChhHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHhCC--------------------CC
Confidence            45789999999411 1238999999999999999999999999999999999988664                    36


Q ss_pred             CCCCCEEEECCeEEechHHHHHHHHhCcHHHHhcc
Q 041824          195 PPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEG  229 (289)
Q Consensus       195 v~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~  229 (289)
                      +   |||||||++|||+|++++|+++|+|+++|..
T Consensus       169 v---PqVfI~G~~IGG~d~l~~l~~~G~L~~~l~~  200 (204)
T PTZ00062        169 Y---PQLYVNGELIGGHDIIKELYESNSLRKVIPD  200 (204)
T ss_pred             C---CeEEECCEEEcChHHHHHHHHcCChhhhhhh
Confidence            6   9999999999999999999999999999864

>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]

Probab=99.75  E-value=6.8e-18  Score=137.84  Aligned_cols=91  Identities=24%  Similarity=0.472  Sum_probs=73.8

Q ss_pred             CCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          115 DGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       115 ~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      ..+++||||+++      +|++|.++|.+|..+++.+..++++.++.-. |+++.+...                ++..+
T Consensus        11 i~~~~VVifSKs------~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~-eiq~~l~~~----------------tg~~t   67 (104)
T KOG1752|consen   11 ISENPVVIFSKS------SCPYCHRAKELLSDLGVNPKVVELDEDEDGS-EIQKALKKL----------------TGQRT   67 (104)
T ss_pred             hhcCCEEEEECC------cCchHHHHHHHHHhCCCCCEEEEccCCCCcH-HHHHHHHHh----------------cCCCC
Confidence            457899999999      9999999999999999999888887764322 444443321                22335


Q ss_pred             CCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCC
Q 041824          195 PPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIP  231 (289)
Q Consensus       195 v~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~  231 (289)
                      +   |+|||+|++|||.+++++||++|+|.++|+.+.
T Consensus        68 v---P~vFI~Gk~iGG~~dl~~lh~~G~L~~~l~~~~  101 (104)
T KOG1752|consen   68 V---PNVFIGGKFIGGASDLMALHKSGELVPLLKEAG  101 (104)
T ss_pred             C---CEEEECCEEEcCHHHHHHHHHcCCHHHHHHHhh
Confidence            5   999999999999999999999999999998753

>TIGR02180 GRX_euk Glutaredoxin

Probab=99.72  E-value=4.4e-17  Score=122.18  Aligned_cols=79  Identities=24%  Similarity=0.558  Sum_probs=67.6

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCc--EEEEEcCCC---hhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVA--VSERDVSMD---RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~--y~ErDVs~d---~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      |++|+++      +|++|++++.+|++++++  |..+||+.+   .+.++++.++.|..                    +
T Consensus         1 V~~f~~~------~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~~--------------------~   54 (84)
T TIGR02180         1 VVVFSKS------YCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQR--------------------T   54 (84)
T ss_pred             CEEEECC------CChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCCC--------------------C
Confidence            6899999      999999999999999999  888888764   34455666655432                    4


Q ss_pred             CCCCCEEEECCeEEechHHHHHHHHhCcHHHHh
Q 041824          195 PPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELI  227 (289)
Q Consensus       195 v~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL  227 (289)
                      +   |+|||||++|||++++.+|+++|+|+++|
T Consensus        55 v---P~v~i~g~~igg~~~~~~~~~~g~l~~~~   84 (84)
T TIGR02180        55 V---PNIFINGKFIGGCSDLLALYKSGKLAELL   84 (84)
T ss_pred             C---CeEEECCEEEcCHHHHHHHHHcCChhhhC
Confidence            4   99999999999999999999999999886

This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.

>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]

Probab=99.69  E-value=6.7e-17  Score=125.09  Aligned_cols=76  Identities=30%  Similarity=0.501  Sum_probs=64.8

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      .|+||+++      +||||.+||++|+++||.|+++|+.++.  +.++.+++..|.+                    ++ 
T Consensus         2 ~v~iyt~~------~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~--------------------tv-   54 (80)
T COG0695           2 NVTIYTKP------GCPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQR--------------------TV-   54 (80)
T ss_pred             CEEEEECC------CCchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCCC--------------------Cc-
Confidence            58999999      9999999999999999999999999987  4444444433432                    56 


Q ss_pred             CCCEEEECCeEEechHHHHHHHHhCcH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVEEGWF  223 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E~G~L  223 (289)
                        |||||||++|||.+++.+++..|.|
T Consensus        55 --P~I~i~~~~igg~~d~~~~~~~~~l   79 (80)
T COG0695          55 --PQIFIGGKHVGGCDDLDALEAKGKL   79 (80)
T ss_pred             --CEEEECCEEEeCcccHHHHHhhccC
Confidence              9999999999999999999988876

>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=99.69  E-value=1.3e-16  Score=119.56  Aligned_cols=79  Identities=27%  Similarity=0.575  Sum_probs=67.8

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC---hhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD---RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d---~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      +|++|++.      +|++|.+|+.+|+++++.|.++|++.+   .+.+++++++.|..                    ++
T Consensus         1 ~v~~y~~~------~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~--------------------~~   54 (82)
T cd03419           1 PVVVFSKS------YCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQR--------------------TV   54 (82)
T ss_pred             CEEEEEcC------CCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCCC--------------------CC
Confidence            58999999      999999999999999999998888765   34466677665532                    44


Q ss_pred             CCCCEEEECCeEEechHHHHHHHHhCcHHHH
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVEEGWFGEL  226 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E~G~L~~l  226 (289)
                         |+|||+|++|||++++.+|+++|+|+++
T Consensus        55 ---P~v~~~g~~igg~~~~~~~~~~g~l~~~   82 (82)
T cd03419          55 ---PNVFIGGKFIGGCDDLMALHKSGKLVKL   82 (82)
T ss_pred             ---CeEEECCEEEcCHHHHHHHHHcCCccCC
Confidence               9999999999999999999999999764

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes

>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria

Probab=99.68  E-value=1.9e-16  Score=117.82  Aligned_cols=70  Identities=23%  Similarity=0.449  Sum_probs=60.6

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +|+||+++      +|++|.+||++|+++||+|+++||+.+. ..++++.+.|..                    ++   
T Consensus         2 ~v~lys~~------~Cp~C~~ak~~L~~~~i~~~~~~v~~~~-~~~~~~~~~g~~--------------------~v---   51 (72)
T cd03029           2 SVSLFTKP------GCPFCARAKAALQENGISYEEIPLGKDI-TGRSLRAVTGAM--------------------TV---   51 (72)
T ss_pred             eEEEEECC------CCHHHHHHHHHHHHcCCCcEEEECCCCh-hHHHHHHHhCCC--------------------Cc---
Confidence            69999999      9999999999999999999999999876 345666665532                    45   


Q ss_pred             CEEEECCeEEechHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~  218 (289)
                      |+|||||++|||+++|.++.
T Consensus        52 P~ifi~g~~igg~~~l~~~l   71 (72)
T cd03029          52 PQVFIDGELIGGSDDLEKYF   71 (72)
T ss_pred             CeEEECCEEEeCHHHHHHHh
Confidence            99999999999999998864

PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.

>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised

Probab=99.68  E-value=1.3e-16  Score=129.25  Aligned_cols=96  Identities=20%  Similarity=0.335  Sum_probs=74.0

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc-ccccccCCCCCcchhhccCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM-RRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg-~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .|.||+||++|.++.-..+.++..||++++|+|+++||++|++.|++|++..| ..+              .+ ....+.
T Consensus         2 ~I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~~e~~r~~mr~~~g~~~~--------------~~-~~~~~l   66 (99)
T PF04908_consen    2 VIKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAMDEEARQWMRENAGPEEK--------------DP-GNGKPL   66 (99)
T ss_dssp             SEEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT-HHHHHHHHHHT--CCC--------------S--TSTT--
T ss_pred             EEEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcCCHHHHHHHHHhcccccc--------------CC-CCCCCC
Confidence            38899999999999999999999999999999999999999999999999885 110              00 001123


Q ss_pred             CCEEEECCeEEechHHHHHHHHhCcHHHHhcc
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVEEGWFGELIEG  229 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~  229 (289)
                      +||||+|++|+|++|++.+++|+++|.++|+-
T Consensus        67 pPqiF~~~~Y~Gdye~f~ea~E~~~L~~fL~L   98 (99)
T PF04908_consen   67 PPQIFNGDEYCGDYEDFEEANENGELEEFLKL   98 (99)
T ss_dssp             S-EEEETTEEEEEHHHHHHHHCTT-HHHHHT-
T ss_pred             CCEEEeCCEEEeeHHHHHHHHhhCHHHHHhCc
Confidence            49999999999999999999999999999963

SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.

>TIGR02190 GlrX-dom Glutaredoxin-family domain

Probab=99.67  E-value=5.4e-16  Score=118.24  Aligned_cols=74  Identities=24%  Similarity=0.417  Sum_probs=62.7

Q ss_pred             CCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          115 DGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       115 ~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      ..+++|+||+++      +|++|.+||++|+.+||+|+++||+.+... ++++++.|..                    +
T Consensus         5 ~~~~~V~ly~~~------~Cp~C~~ak~~L~~~gi~y~~idi~~~~~~-~~~~~~~g~~--------------------~   57 (79)
T TIGR02190         5 RKPESVVVFTKP------GCPFCAKAKATLKEKGYDFEEIPLGNDARG-RSLRAVTGAT--------------------T   57 (79)
T ss_pred             CCCCCEEEEECC------CCHhHHHHHHHHHHcCCCcEEEECCCChHH-HHHHHHHCCC--------------------C
Confidence            357889999999      999999999999999999999999877543 5566655532                    4


Q ss_pred             CCCCCEEEECCeEEechHHHHHHH
Q 041824          195 PPVLPRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       195 v~~LPqIFI~G~~IGG~del~~L~  218 (289)
                      +   |+|||||++|||+++|.++.
T Consensus        58 v---P~i~i~g~~igG~~~l~~~l   78 (79)
T TIGR02190        58 V---PQVFIGGKLIGGSDELEAYL   78 (79)
T ss_pred             c---CeEEECCEEEcCHHHHHHHh
Confidence            5   99999999999999998753

This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.

>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=99.66  E-value=7.1e-16  Score=110.35  Aligned_cols=72  Identities=33%  Similarity=0.662  Sum_probs=65.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +|+||+++      +|++|++|+.+|++++++|.++|+..+.+.+++|+++.|..                    ++   
T Consensus         1 ~v~ly~~~------~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~~--------------------~~---   51 (72)
T cd02066           1 KVVVFSKS------TCPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSGWP--------------------TV---   51 (72)
T ss_pred             CEEEEECC------CCHHHHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHhCCC--------------------Cc---
Confidence            58999999      99999999999999999999999999988888998887642                    44   


Q ss_pred             CEEEECCeEEechHHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E  219 (289)
                      |+||+||++|||++++++|++
T Consensus        52 P~~~~~~~~igg~~~~~~~~~   72 (72)
T cd02066          52 PQIFINGEFIGGYDDLKALHE   72 (72)
T ss_pred             CEEEECCEEEecHHHHHHhhC
Confidence            999999999999999999874

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which

>PRK11200 grxA glutaredoxin 1; Provisional

Probab=99.66  E-value=7.8e-16  Score=118.31  Aligned_cols=75  Identities=23%  Similarity=0.310  Sum_probs=65.9

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh-----CCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN-----FGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~-----~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      +|+||+++      +|++|.+|+++|++     .+|+|+++||..+...+++|.++.+..                  ..
T Consensus         2 ~v~iy~~~------~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~~~~~el~~~~~~~------------------~~   57 (85)
T PRK11200          2 FVVIFGRP------GCPYCVRAKELAEKLSEERDDFDYRYVDIHAEGISKADLEKTVGKP------------------VE   57 (85)
T ss_pred             EEEEEeCC------CChhHHHHHHHHHhhcccccCCcEEEEECCCChHHHHHHHHHHCCC------------------CC
Confidence            69999999      99999999999999     899999999998877788888876642                  12


Q ss_pred             CCCCCCEEEECCeEEechHHHHHHHHh
Q 041824          194 LPPVLPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       194 tv~~LPqIFI~G~~IGG~del~~L~E~  220 (289)
                      ++   |||||||++|||+++|.++++.
T Consensus        58 ~v---P~ifi~g~~igg~~~~~~~~~~   81 (85)
T PRK11200         58 TV---PQIFVDQKHIGGCTDFEAYVKE   81 (85)
T ss_pred             cC---CEEEECCEEEcCHHHHHHHHHH
Confidence            44   9999999999999999998864

>TIGR02183 GRXA Glutaredoxin, GrxA family

Probab=99.65  E-value=8.2e-16  Score=119.48  Aligned_cols=75  Identities=24%  Similarity=0.387  Sum_probs=63.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      |+||+++      +|++|.+||++|+.+     ++.|+++||..+...+++|.++.|..                  ..+
T Consensus         2 V~vys~~------~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~~~~~~~l~~~~g~~------------------~~t   57 (86)
T TIGR02183         2 VVIFGRP------GCPYCVRAKQLAEKLAIERADFEFRYIDIHAEGISKADLEKTVGKP------------------VET   57 (86)
T ss_pred             EEEEeCC------CCccHHHHHHHHHHhCcccCCCcEEEEECCCCHHHHHHHHHHhCCC------------------CCC
Confidence            8999999      999999999999998     46799999997766677888876641                  114


Q ss_pred             CCCCCEEEECCeEEechHHHHHHHHhC
Q 041824          195 PPVLPRVFVKGRYVGGAEEVLRIVEEG  221 (289)
Q Consensus       195 v~~LPqIFI~G~~IGG~del~~L~E~G  221 (289)
                      +   |||||||++|||+++|.++++++
T Consensus        58 V---P~ifi~g~~igG~~dl~~~~~~~   81 (86)
T TIGR02183        58 V---PQIFVDEKHVGGCTDFEQLVKEN   81 (86)
T ss_pred             c---CeEEECCEEecCHHHHHHHHHhc
Confidence            4   99999999999999999998774

This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.

>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=99.65  E-value=6.9e-16  Score=125.52  Aligned_cols=92  Identities=24%  Similarity=0.354  Sum_probs=82.3

Q ss_pred             CCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCC-CcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          115 DGENKVVIYTTTLRGIRKTYEACKAAKSVIENFG-VAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       115 ~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~g-V~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      ...++||||.+... -.+.|.++.+|.+||...| |+|..+||-.|+++|+.|++...                    |+
T Consensus        12 i~~n~VvLFMKGtp-~~P~CGFS~~~vqiL~~~g~v~~~~vnVL~d~eiR~~lk~~s~--------------------WP   70 (105)
T COG0278          12 IKENPVVLFMKGTP-EFPQCGFSAQAVQILSACGVVDFAYVDVLQDPEIRQGLKEYSN--------------------WP   70 (105)
T ss_pred             hhcCceEEEecCCC-CCCCCCccHHHHHHHHHcCCcceeEEeeccCHHHHhccHhhcC--------------------CC
Confidence            35789999999844 4458999999999999999 89999999999999999998743                    66


Q ss_pred             CCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccC
Q 041824          194 LPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGI  230 (289)
Q Consensus       194 tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~  230 (289)
                      |.   ||+||+|++|||.|-+.+|+++|+|+++|+..
T Consensus        71 T~---PQLyi~GEfvGG~DIv~Em~q~GELq~~l~~~  104 (105)
T COG0278          71 TF---PQLYVNGEFVGGCDIVREMYQSGELQTLLKEA  104 (105)
T ss_pred             CC---ceeeECCEEeccHHHHHHHHHcchHHHHHHhc
Confidence            76   99999999999999999999999999999753

>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors

Probab=99.57  E-value=1.2e-14  Score=104.83  Aligned_cols=60  Identities=38%  Similarity=0.657  Sum_probs=55.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      |+||++.      +|++|.+++++|+++||+|+++||+.+++.+++|+++.|..                    ++   |
T Consensus         1 V~vy~~~------~C~~C~~~~~~L~~~~i~y~~~dv~~~~~~~~~l~~~~g~~--------------------~~---P   51 (60)
T PF00462_consen    1 VVVYTKP------GCPYCKKAKEFLDEKGIPYEEVDVDEDEEAREELKELSGVR--------------------TV---P   51 (60)
T ss_dssp             EEEEEST------TSHHHHHHHHHHHHTTBEEEEEEGGGSHHHHHHHHHHHSSS--------------------SS---S
T ss_pred             cEEEEcC------CCcCHHHHHHHHHHcCCeeeEcccccchhHHHHHHHHcCCC--------------------cc---C
Confidence            7999999      99999999999999999999999999999999999987643                    45   9


Q ss_pred             EEEECCeEE
Q 041824          200 RVFVKGRYV  208 (289)
Q Consensus       200 qIFI~G~~I  208 (289)
                      +|||||++|
T Consensus        52 ~v~i~g~~I   60 (60)
T PF00462_consen   52 QVFIDGKFI   60 (60)
T ss_dssp             EEEETTEEE
T ss_pred             EEEECCEEC
Confidence            999999987

Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....

>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional

Probab=99.55  E-value=1.9e-14  Score=140.89  Aligned_cols=93  Identities=20%  Similarity=0.232  Sum_probs=72.5

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      +++|+||+++      +||+|.+||++|+.+||+|+++||+.++...+.+.+. +..           .+...+|..++ 
T Consensus         1 m~~V~vys~~------~Cp~C~~aK~~L~~~gi~~~~idi~~~~~~~~~~~~~-~~~-----------~~~~~~g~~tv-   61 (410)
T PRK12759          1 MVEVRIYTKT------NCPFCDLAKSWFGANDIPFTQISLDDDVKRAEFYAEV-NKN-----------ILLVEEHIRTV-   61 (410)
T ss_pred             CCcEEEEeCC------CCHHHHHHHHHHHHCCCCeEEEECCCChhHHHHHHHH-hhc-----------cccccCCCCcc-
Confidence            4689999999      9999999999999999999999999877554433332 210           00001233355 


Q ss_pred             CCCEEEECCeEEechHHHHHHHHhCcHHHHhccCCC
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPI  232 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~  232 (289)
                        |||||||++|||++++++  .+|+|.++|++.+-
T Consensus        62 --P~ifi~~~~igGf~~l~~--~~g~l~~~~~~~~~   93 (410)
T PRK12759         62 --PQIFVGDVHIGGYDNLMA--RAGEVIARVKGSSL   93 (410)
T ss_pred             --CeEEECCEEEeCchHHHH--HhCCHHHHhcCCcc
Confidence              999999999999999987  99999999998653

>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=99.48  E-value=1.4e-13  Score=125.62  Aligned_cols=92  Identities=17%  Similarity=0.302  Sum_probs=82.2

Q ss_pred             CCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          115 DGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       115 ~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      +..++|+||.++.+ -...|.+.+++..||+.++|+|...||..|.+.|+-|+++..                    |+|
T Consensus       136 v~a~~v~lFmKG~p-~~P~CGFS~~~v~iL~~~nV~~~~fdIL~DeelRqglK~fSd--------------------WPT  194 (227)
T KOG0911|consen  136 VKAKPVMLFMKGTP-EEPKCGFSRQLVGILQSHNVNYTIFDVLTDEELRQGLKEFSD--------------------WPT  194 (227)
T ss_pred             cccCeEEEEecCCC-CcccccccHHHHHHHHHcCCCeeEEeccCCHHHHHHhhhhcC--------------------CCC
Confidence            56788999999844 456899999999999999999999999999999988888743                    667


Q ss_pred             CCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccC
Q 041824          195 PPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGI  230 (289)
Q Consensus       195 v~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~  230 (289)
                      .   |||||+|++|||.|-+.+||++|+|...|+.+
T Consensus       195 f---PQlyI~GEFiGGlDIl~~m~~~geL~~~l~~~  227 (227)
T KOG0911|consen  195 F---PQLYVKGEFIGGLDILKEMHEKGELVYTLKEA  227 (227)
T ss_pred             c---cceeECCEeccCcHHHHHHhhcccHHHHhhcC
Confidence            6   99999999999999999999999999998753

>PRK10329 glutaredoxin-like protein; Provisional

Probab=99.42  E-value=1.2e-12  Score=101.50  Aligned_cols=65  Identities=25%  Similarity=0.263  Sum_probs=57.8

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +|+||+++      +|++|.++|.+|+++||+|+++||+.+++.+++++.. |..                    ++   
T Consensus         2 ~v~lYt~~------~Cp~C~~ak~~L~~~gI~~~~idi~~~~~~~~~~~~~-g~~--------------------~v---   51 (81)
T PRK10329          2 RITIYTRN------DCVQCHATKRAMESRGFDFEMINVDRVPEAAETLRAQ-GFR--------------------QL---   51 (81)
T ss_pred             EEEEEeCC------CCHhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHc-CCC--------------------Cc---
Confidence            69999999      9999999999999999999999999999888888763 432                    45   


Q ss_pred             CEEEECCeEEechHH
Q 041824          199 PRVFVKGRYVGGAEE  213 (289)
Q Consensus       199 PqIFI~G~~IGG~de  213 (289)
                      |+|+|++..|+||+.
T Consensus        52 Pvv~i~~~~~~Gf~~   66 (81)
T PRK10329         52 PVVIAGDLSWSGFRP   66 (81)
T ss_pred             CEEEECCEEEecCCH
Confidence            999999999999954

>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH

Probab=99.41  E-value=7.8e-13  Score=98.84  Aligned_cols=64  Identities=19%  Similarity=0.338  Sum_probs=56.2

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      |+||+++      +|++|++||++|+++||+|+++||..+++.++++++. |..                    ++   |
T Consensus         1 v~ly~~~------~Cp~C~~ak~~L~~~~i~~~~~di~~~~~~~~~~~~~-g~~--------------------~v---P   50 (72)
T TIGR02194         1 ITVYSKN------NCVQCKMTKKALEEHGIAFEEINIDEQPEAIDYVKAQ-GFR--------------------QV---P   50 (72)
T ss_pred             CEEEeCC------CCHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHc-CCc--------------------cc---C
Confidence            6899999      9999999999999999999999999999888888754 532                    45   9


Q ss_pred             EEEECCe-EEechHH
Q 041824          200 RVFVKGR-YVGGAEE  213 (289)
Q Consensus       200 qIFI~G~-~IGG~de  213 (289)
                      +|||+|. +|||++.
T Consensus        51 ~v~~~g~~~~~G~~~   65 (72)
T TIGR02194        51 VIVADGDLSWSGFRP   65 (72)
T ss_pred             EEEECCCcEEeccCH
Confidence            9999775 9999965

NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.

>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family

Probab=99.13  E-value=5.1e-10  Score=80.47  Aligned_cols=66  Identities=30%  Similarity=0.449  Sum_probs=57.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +|+||+++      +|++|++++.+|+.+++.|.++|++.++..++++.+..|..                    ++   
T Consensus         1 ~i~lf~~~------~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~~~~~~--------------------~v---   51 (74)
T TIGR02196         1 KVKVYTTP------WCPPCKKAKEYLTSKGIAFEEIDVEKDSAAREEVLKVLGQR--------------------GV---   51 (74)
T ss_pred             CEEEEcCC------CChhHHHHHHHHHHCCCeEEEEeccCCHHHHHHHHHHhCCC--------------------cc---
Confidence            48999999      99999999999999999999999998888788887776642                    34   


Q ss_pred             CEEEECCeEEechHH
Q 041824          199 PRVFVKGRYVGGAEE  213 (289)
Q Consensus       199 PqIFI~G~~IGG~de  213 (289)
                      |.++++|+.++|++.
T Consensus        52 P~~~~~~~~~~g~~~   66 (74)
T TIGR02196        52 PVIVIGHKIIVGFDP   66 (74)
T ss_pred             cEEEECCEEEeeCCH
Confidence            999999999988854

This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.

>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile

Probab=99.08  E-value=7.9e-10  Score=79.44  Aligned_cols=66  Identities=30%  Similarity=0.427  Sum_probs=57.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +|++|+++      +|++|.+++.+|+.++++|..+|++.+...+++++++.+..                    .+   
T Consensus         1 ~v~l~~~~------~c~~c~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~~~~--------------------~v---   51 (73)
T cd02976           1 EVTVYTKP------DCPYCKATKRFLDERGIPFEEVDVDEDPEALEELKKLNGYR--------------------SV---   51 (73)
T ss_pred             CEEEEeCC------CChhHHHHHHHHHHCCCCeEEEeCCCCHHHHHHHHHHcCCc--------------------cc---
Confidence            48999999      99999999999999999999999998888888888764422                    34   


Q ss_pred             CEEEECCeEEechHH
Q 041824          199 PRVFVKGRYVGGAEE  213 (289)
Q Consensus       199 PqIFI~G~~IGG~de  213 (289)
                      |.|+++|+.|+|++.
T Consensus        52 P~i~~~~~~i~g~~~   66 (73)
T cd02976          52 PVVVIGDEHLSGFRP   66 (73)
T ss_pred             CEEEECCEEEecCCH
Confidence            999999999999875

In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou

>TIGR02200 GlrX_actino Glutaredoxin-like protein

Probab=98.87  E-value=2.1e-08  Score=73.55  Aligned_cols=65  Identities=18%  Similarity=0.310  Sum_probs=53.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHH-cccccccCCCCCcchhhccCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELM-MRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~ll-g~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +|+||+++      +|++|++++.+|+.++++|+++|++.++...++++++. +..                    ++  
T Consensus         1 ~v~ly~~~------~C~~C~~~~~~L~~~~~~~~~idi~~~~~~~~~~~~~~~~~~--------------------~v--   52 (77)
T TIGR02200         1 TITVYGTT------WCGYCAQLMRTLDKLGAAYEWVDIEEDEGAADRVVSVNNGNM--------------------TV--   52 (77)
T ss_pred             CEEEEECC------CChhHHHHHHHHHHcCCceEEEeCcCCHhHHHHHHHHhCCCc--------------------ee--
Confidence            58999999      99999999999999999999999998887777877774 322                    34  


Q ss_pred             CCEEEE-CCeEEechH
Q 041824          198 LPRVFV-KGRYVGGAE  212 (289)
Q Consensus       198 LPqIFI-~G~~IGG~d  212 (289)
                       |+|++ +|+.+....
T Consensus        53 -P~i~~~~g~~l~~~~   67 (77)
T TIGR02200        53 -PTVKFADGSFLTNPS   67 (77)
T ss_pred             -CEEEECCCeEecCCC
Confidence             99976 667776543

This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.

>KOG4023 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.82  E-value=1.1e-08  Score=83.63  Aligned_cols=100  Identities=17%  Similarity=0.299  Sum_probs=84.6

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      -|.||++|.+|.+........+..||+...|.|+++||.+..+.++++.......++.        .    .|.+.+   
T Consensus         3 ~irvyvasssg~~eik~kqqevv~~Ld~~ki~fk~~di~~~e~~~~~~~~~~~~e~r~--------~----~GnplP---   67 (108)
T KOG4023|consen    3 VIRVYVASSSGSTEIKKKQQEVVRFLDANKIGFKEIDITAYEEVRQWMDNNVPDEKRP--------L----NGNPLP---   67 (108)
T ss_pred             ceEEEEecCCCchHHHhhhhhhhhhhhcccCCcceeeccchhhhHHHHHhcCChhhcC--------C----CCCCCC---
Confidence            5889999999999999999999999999999999999999888887777655322110        0    234566   


Q ss_pred             CEEEECCeEEechHHHHHHHHhCcHHHHhccCCCc
Q 041824          199 PRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIR  233 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~~  233 (289)
                      ||||-+++|.|+||.+.+..|++.|.++|+.+|..
T Consensus        68 Pqifn~d~Y~Gdye~F~ea~E~ntl~eFL~lap~~  102 (108)
T KOG4023|consen   68 PQIFNGDQYCGDYELFFEAVEQNTLQEFLGLAPPP  102 (108)
T ss_pred             cccccCccccccHHHHHHHHHHHHHHHHHccCCCc
Confidence            99999999999999999999999999999988765

>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)

Probab=98.65  E-value=6.8e-08  Score=70.16  Aligned_cols=58  Identities=12%  Similarity=0.192  Sum_probs=46.9

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      +|++|+++      +|++|.+++.+|+.+     +|.|.++|++.++    ++.+..|..                    
T Consensus         2 ~v~~f~~~------~C~~C~~~~~~l~~l~~~~~~i~~~~id~~~~~----~l~~~~~i~--------------------   51 (67)
T cd02973           2 NIEVFVSP------TCPYCPDAVQAANRIAALNPNISAEMIDAAEFP----DLADEYGVM--------------------   51 (67)
T ss_pred             EEEEEECC------CCCCcHHHHHHHHHHHHhCCceEEEEEEcccCH----hHHHHcCCc--------------------
Confidence            58999999      999999999999875     7999999998764    344444432                    


Q ss_pred             CCCCCCEEEECCeEEe
Q 041824          194 LPPVLPRVFVKGRYVG  209 (289)
Q Consensus       194 tv~~LPqIFI~G~~IG  209 (289)
                      ++   |+|||+|++++
T Consensus        52 ~v---Pti~i~~~~~~   64 (67)
T cd02973          52 SV---PAIVINGKVEF   64 (67)
T ss_pred             cc---CEEEECCEEEE
Confidence            34   99999999876

All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri

>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins

Probab=98.53  E-value=8.2e-07  Score=66.92  Aligned_cols=72  Identities=10%  Similarity=0.139  Sum_probs=56.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      ++||+.+      .|++|.+|+.+|+.+||+|+++||..+....+++.++.+..                    ++   |
T Consensus         2 ~~Ly~~~------~sp~~~kv~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~p~~--------------------~v---P   52 (77)
T cd03041           2 LELYEFE------GSPFCRLVREVLTELELDVILYPCPKGSPKRDKFLEKGGKV--------------------QV---P   52 (77)
T ss_pred             ceEecCC------CCchHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHhCCCC--------------------cc---c
Confidence            6799999      99999999999999999999999986655566776553321                    45   9


Q ss_pred             EEEE--CCeEEechHHHHHHHHh
Q 041824          200 RVFV--KGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       200 qIFI--~G~~IGG~del~~L~E~  220 (289)
                      .+..  +|..+.+...+.+..++
T Consensus        53 ~l~~~~~~~~l~es~~I~~yL~~   75 (77)
T cd03041          53 YLVDPNTGVQMFESADIVKYLFK   75 (77)
T ss_pred             EEEeCCCCeEEEcHHHHHHHHHH
Confidence            9876  36788888888776543

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2

Probab=98.44  E-value=2.4e-06  Score=63.64  Aligned_cols=69  Identities=14%  Similarity=0.284  Sum_probs=53.6

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +|.||+..      .|++|++|+.+|+.+||+|++++++.  ..+.+++ ..+.                    .++   
T Consensus         1 ~i~Ly~~~------~~p~c~kv~~~L~~~gi~y~~~~~~~--~~~~~~~-~~~~--------------------~~v---   48 (77)
T cd03040           1 KITLYQYK------TCPFCCKVRAFLDYHGIPYEVVEVNP--VSRKEIK-WSSY--------------------KKV---   48 (77)
T ss_pred             CEEEEEcC------CCHHHHHHHHHHHHCCCceEEEECCc--hhHHHHH-HhCC--------------------Ccc---
Confidence            58899999      99999999999999999999999854  3344543 2221                    134   


Q ss_pred             CEEEEC----CeEEechHHHHHHHH
Q 041824          199 PRVFVK----GRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI~----G~~IGG~del~~L~E  219 (289)
                      |.++++    |+.|.....+.+..+
T Consensus        49 P~l~~~~~~~~~~l~eS~~I~~yL~   73 (77)
T cd03040          49 PILRVESGGDGQQLVDSSVIISTLK   73 (77)
T ss_pred             CEEEECCCCCccEEEcHHHHHHHHH
Confidence            999987    788888888876554

Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.

>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=98.34  E-value=1.8e-06  Score=60.13  Aligned_cols=68  Identities=16%  Similarity=0.135  Sum_probs=52.6

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCE
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPR  200 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPq  200 (289)
                      .+|+..      .|++|.+++.+|+.+||+|+.+++..+....+++++..+.                       ..+|.
T Consensus         2 ~ly~~~------~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~P~   52 (71)
T cd00570           2 KLYYFP------GSPRSLRVRLALEEKGLPYELVPVDLGEGEQEEFLALNPL-----------------------GKVPV   52 (71)
T ss_pred             EEEeCC------CCccHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHhcCCC-----------------------CCCCE
Confidence            578888      8999999999999999999999998654333344443321                       24499


Q ss_pred             EEECCeEEechHHHHHH
Q 041824          201 VFVKGRYVGGAEEVLRI  217 (289)
Q Consensus       201 IFI~G~~IGG~del~~L  217 (289)
                      |+++|..++....+.+.
T Consensus        53 l~~~~~~~~es~~I~~y   69 (71)
T cd00570          53 LEDGGLVLTESLAILEY   69 (71)
T ss_pred             EEECCEEEEcHHHHHHH
Confidence            99999999998877654

In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma

>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E

Probab=98.32  E-value=3.6e-06  Score=61.84  Aligned_cols=68  Identities=10%  Similarity=0.190  Sum_probs=52.0

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCE
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPR  200 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPq  200 (289)
                      .+|+..      .|++|.++|.+|..+||+|+++++..+.. ..+ .+..+.                    .++   |.
T Consensus         2 ~Ly~~~------~~p~~~rvr~~L~~~gl~~~~~~~~~~~~-~~~-~~~~~~--------------------~~v---P~   50 (71)
T cd03037           2 KLYIYE------HCPFCVKARMIAGLKNIPVEQIILQNDDE-ATP-IRMIGA--------------------KQV---PI   50 (71)
T ss_pred             ceEecC------CCcHhHHHHHHHHHcCCCeEEEECCCCch-HHH-HHhcCC--------------------Ccc---CE
Confidence            588888      99999999999999999999999875432 122 222221                    134   99


Q ss_pred             EEEC-CeEEechHHHHHHHH
Q 041824          201 VFVK-GRYVGGAEEVLRIVE  219 (289)
Q Consensus       201 IFI~-G~~IGG~del~~L~E  219 (289)
                      |+++ |..+++...+.+..+
T Consensus        51 L~~~~~~~l~es~aI~~yL~   70 (71)
T cd03037          51 LEKDDGSFMAESLDIVAFID   70 (71)
T ss_pred             EEeCCCeEeehHHHHHHHHh
Confidence            9997 899999999887654

coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.

>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC

Probab=98.29  E-value=1.2e-06  Score=71.42  Aligned_cols=47  Identities=23%  Similarity=0.438  Sum_probs=43.4

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      |.||+++      .|++|++|+++|+++||+|+++|+..++..++||.++++.
T Consensus         1 i~iY~~~------~C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~el~~~~~~   47 (111)
T cd03036           1 LKFYEYP------KCSTCRKAKKWLDEHGVDYTAIDIVEEPPSKEELKKWLEK   47 (111)
T ss_pred             CEEEECC------CCHHHHHHHHHHHHcCCceEEecccCCcccHHHHHHHHHH
Confidence            5799999      9999999999999999999999999998888899887764

Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.

>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx

Probab=98.28  E-value=1.1e-06  Score=70.13  Aligned_cols=48  Identities=25%  Similarity=0.359  Sum_probs=44.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHccc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRR  173 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~  173 (289)
                      |+||+++      +|++|++|+++|+++||+|+++||..++...++|+++++..
T Consensus         1 i~iY~~~------~C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~~l~~~~~~~   48 (105)
T cd02977           1 ITIYGNP------NCSTSRKALAWLEEHGIEYEFIDYLKEPPTKEELKELLAKL   48 (105)
T ss_pred             CEEEECC------CCHHHHHHHHHHHHcCCCcEEEeeccCCCCHHHHHHHHHhc
Confidence            5799999      99999999999999999999999998888888999887653

ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.

>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=98.16  E-value=1.3e-05  Score=62.25  Aligned_cols=75  Identities=11%  Similarity=0.109  Sum_probs=57.0

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      |-....+.||+..      .|++|.+++.+|+.+|++|+.++++... ..+++.+..+..                    
T Consensus        13 ~~~~~~~~Ly~~~------~sp~~~kv~~~L~~~gl~~~~~~v~~~~-~~~~~~~~np~~--------------------   65 (89)
T cd03055          13 PPVPGIIRLYSMR------FCPYAQRARLVLAAKNIPHEVININLKD-KPDWFLEKNPQG--------------------   65 (89)
T ss_pred             CCCCCcEEEEeCC------CCchHHHHHHHHHHcCCCCeEEEeCCCC-CcHHHHhhCCCC--------------------
Confidence            3445679999999      9999999999999999999999987643 224455443321                    


Q ss_pred             CCCCCCEEEEC-CeEEechHHHHHHH
Q 041824          194 LPPVLPRVFVK-GRYVGGAEEVLRIV  218 (289)
Q Consensus       194 tv~~LPqIFI~-G~~IGG~del~~L~  218 (289)
                      .+   |.++++ |..|.....+.++.
T Consensus        66 ~v---PvL~~~~g~~l~eS~aI~~yL   88 (89)
T cd03055          66 KV---PALEIDEGKVVYESLIICEYL   88 (89)
T ss_pred             Cc---CEEEECCCCEEECHHHHHHhh
Confidence            34   999998 88888887776654

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega

>PRK01655 spxA transcriptional regulator Spx; Reviewed

Probab=98.15  E-value=4.7e-06  Score=70.08  Aligned_cols=46  Identities=20%  Similarity=0.474  Sum_probs=42.6

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      |+||+++      +|++|++|+++|+++||+|+++||..++..++||++++.
T Consensus         2 i~iY~~~------~C~~C~ka~~~L~~~gi~~~~idi~~~~~~~~eL~~~l~   47 (131)
T PRK01655          2 VTLFTSP------SCTSCRKAKAWLEEHDIPFTERNIFSSPLTIDEIKQILR   47 (131)
T ss_pred             EEEEeCC------CChHHHHHHHHHHHcCCCcEEeeccCChhhHHHHHHHHH
Confidence            7899999      999999999999999999999999999888888887764

>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E

Probab=98.10  E-value=2e-05  Score=57.47  Aligned_cols=70  Identities=19%  Similarity=0.216  Sum_probs=53.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      ++||+..      .|++|++++.+|+.+|++|++++++... ..+++++....                    ..+   |
T Consensus         1 ~~ly~~~------~~~~~~~v~~~l~~~gi~~~~~~v~~~~-~~~~~~~~~p~--------------------~~v---P   50 (73)
T cd03059           1 MTLYSGP------DDVYSHRVRIVLAEKGVSVEIIDVDPDN-PPEDLAELNPY--------------------GTV---P   50 (73)
T ss_pred             CEEEECC------CChhHHHHHHHHHHcCCccEEEEcCCCC-CCHHHHhhCCC--------------------CCC---C
Confidence            4689999      9999999999999999999999887542 23455554321                    134   9


Q ss_pred             EEEECCeEEechHHHHHHHH
Q 041824          200 RVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       200 qIFI~G~~IGG~del~~L~E  219 (289)
                      .+..+|..+.....+.+..+
T Consensus        51 ~l~~~~~~l~es~aI~~yL~   70 (73)
T cd03059          51 TLVDRDLVLYESRIIMEYLD   70 (73)
T ss_pred             EEEECCEEEEcHHHHHHHHH
Confidence            99888888888777776554

coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.

>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family

Probab=98.03  E-value=1.1e-05  Score=66.03  Aligned_cols=47  Identities=23%  Similarity=0.412  Sum_probs=42.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      |.||+.+      +|++|++|+++|+++||+|+++|+..++..++||.+++..
T Consensus         1 i~iY~~~------~C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~el~~l~~~   47 (117)
T TIGR01617         1 IKVYGSP------NCTTCKKARRWLEANGIEYQFIDIGEDGPTREELLDILSL   47 (117)
T ss_pred             CEEEeCC------CCHHHHHHHHHHHHcCCceEEEecCCChhhHHHHHHHHHH
Confidence            5799999      9999999999999999999999999988888888877653

This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.

>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes

Probab=98.00  E-value=1.6e-05  Score=64.98  Aligned_cols=46  Identities=28%  Similarity=0.520  Sum_probs=42.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      |.||+.+      .|+.|++|+++|+.+||.|+++|+..++-.++||++.+.
T Consensus         2 i~iY~~~------~C~~c~ka~~~L~~~gi~~~~idi~~~~~~~~el~~~~~   47 (115)
T cd03032           2 IKLYTSP------SCSSCRKAKQWLEEHQIPFEERNLFKQPLTKEELKEILS   47 (115)
T ss_pred             EEEEeCC------CCHHHHHHHHHHHHCCCceEEEecCCCcchHHHHHHHHH
Confidence            7899999      999999999999999999999999988777888887765

It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.

>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs

Probab=97.92  E-value=5.7e-05  Score=55.67  Aligned_cols=66  Identities=15%  Similarity=0.278  Sum_probs=50.3

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCE
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPR  200 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPq  200 (289)
                      ++|+..      .|++|.+++.+|+.+|++|+.++|+.... .++++++....                    ++   |.
T Consensus         2 ~ly~~~------~~p~~~rv~~~L~~~gl~~e~~~v~~~~~-~~~~~~~np~~--------------------~v---P~   51 (71)
T cd03060           2 ILYSFR------RCPYAMRARMALLLAGITVELREVELKNK-PAEMLAASPKG--------------------TV---PV   51 (71)
T ss_pred             EEEecC------CCcHHHHHHHHHHHcCCCcEEEEeCCCCC-CHHHHHHCCCC--------------------CC---CE
Confidence            689998      99999999999999999999999876422 34565543321                    45   99


Q ss_pred             EEEC-CeEEechHHHHH
Q 041824          201 VFVK-GRYVGGAEEVLR  216 (289)
Q Consensus       201 IFI~-G~~IGG~del~~  216 (289)
                      +..+ |..|.....+.+
T Consensus        52 L~~~~g~~l~eS~aI~~   68 (71)
T cd03060          52 LVLGNGTVIEESLDIMR   68 (71)
T ss_pred             EEECCCcEEecHHHHHH
Confidence            9995 888876666554

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r

>PRK12559 transcriptional regulator Spx; Provisional

Probab=97.92  E-value=2e-05  Score=66.50  Aligned_cols=46  Identities=26%  Similarity=0.510  Sum_probs=42.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      |+||+.+      .|+.|++|+++|+.+||+|+++|+..++-.++||++++.
T Consensus         2 i~iY~~~------~C~~crkA~~~L~~~gi~~~~~di~~~~~s~~el~~~l~   47 (131)
T PRK12559          2 VVLYTTA------SCASCRKAKAWLEENQIDYTEKNIVSNSMTVDELKSILR   47 (131)
T ss_pred             EEEEeCC------CChHHHHHHHHHHHcCCCeEEEEeeCCcCCHHHHHHHHH
Confidence            7899999      999999999999999999999999988877788877754

>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S

Probab=97.91  E-value=3.8e-05  Score=55.64  Aligned_cols=68  Identities=13%  Similarity=0.145  Sum_probs=49.7

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      .||+..      .|++|.+++.+|+.+|++|++++++...  ...+++.+.....                    .+   
T Consensus         2 ~Ly~~~------~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~~--------------------~v---   52 (74)
T cd03051           2 KLYDSP------TAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPAG--------------------TV---   52 (74)
T ss_pred             EEEeCC------CCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCCC--------------------CC---
Confidence            689998      9999999999999999999988887532  2334555543321                    34   


Q ss_pred             CEEEE-CCeEEechHHHHHH
Q 041824          199 PRVFV-KGRYVGGAEEVLRI  217 (289)
Q Consensus       199 PqIFI-~G~~IGG~del~~L  217 (289)
                      |.+.+ +|..+.....+.+.
T Consensus        53 P~l~~~~~~~l~es~aI~~y   72 (74)
T cd03051          53 PVLELDDGTVITESVAICRY   72 (74)
T ss_pred             CEEEeCCCCEEecHHHHHHH
Confidence            99997 66777766666554

cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.

>PRK13344 spxA transcriptional regulator Spx; Reviewed

Probab=97.91  E-value=2.1e-05  Score=66.44  Aligned_cols=46  Identities=24%  Similarity=0.442  Sum_probs=41.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      |+||+.+      .|+.|++|+++|+++||+|+++|+..++-.++||.+++.
T Consensus         2 i~iY~~~------~C~~crkA~~~L~~~~i~~~~~d~~~~~~s~~eL~~~l~   47 (132)
T PRK13344          2 IKIYTIS------SCTSCKKAKTWLNAHQLSYKEQNLGKEPLTKEEILAILT   47 (132)
T ss_pred             EEEEeCC------CCHHHHHHHHHHHHcCCCeEEEECCCCCCCHHHHHHHHH
Confidence            7899999      999999999999999999999999988777777776653

>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC

Probab=97.89  E-value=2.2e-05  Score=63.81  Aligned_cols=46  Identities=22%  Similarity=0.260  Sum_probs=42.1

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      |+||+.+      +|..|++|+++|+++||+|+++|+..++--.+||++++.
T Consensus         1 i~iy~~~------~C~~crka~~~L~~~~i~~~~~di~~~p~s~~eL~~~l~   46 (105)
T cd03035           1 ITLYGIK------NCDTVKKARKWLEARGVAYTFHDYRKDGLDAATLERWLA   46 (105)
T ss_pred             CEEEeCC------CCHHHHHHHHHHHHcCCCeEEEecccCCCCHHHHHHHHH
Confidence            6799999      999999999999999999999999998877888887765

The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.

>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A

Probab=97.86  E-value=7.6e-05  Score=55.78  Aligned_cols=68  Identities=13%  Similarity=0.211  Sum_probs=55.1

Q ss_pred             EEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEE
Q 041824          122 IYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRV  201 (289)
Q Consensus       122 VYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqI  201 (289)
                      +|...      .|++|.+|+.+|+.+||+|+.+++..... .+++.++.+..                    ++   |.+
T Consensus         1 Ly~~~------~Sp~~~kv~~~l~~~~i~~~~~~v~~~~~-~~~~~~~~p~~--------------------~v---PvL   50 (75)
T PF13417_consen    1 LYGFP------GSPYSQKVRLALEEKGIPYELVPVDPEEK-RPEFLKLNPKG--------------------KV---PVL   50 (75)
T ss_dssp             EEEET------TSHHHHHHHHHHHHHTEEEEEEEEBTTST-SHHHHHHSTTS--------------------BS---SEE
T ss_pred             CCCcC------CChHHHHHHHHHHHcCCeEEEeccCcccc-hhHHHhhcccc--------------------cc---eEE
Confidence            57888      99999999999999999999999986543 56666654321                    34   999


Q ss_pred             EECCeEEechHHHHHHHH
Q 041824          202 FVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       202 FI~G~~IGG~del~~L~E  219 (289)
                      ..||..|.+...+.+..+
T Consensus        51 ~~~g~~l~dS~~I~~yL~   68 (75)
T PF13417_consen   51 VDDGEVLTDSAAIIEYLE   68 (75)
T ss_dssp             EETTEEEESHHHHHHHHH
T ss_pred             EECCEEEeCHHHHHHHHH
Confidence            999999999988887654

...

>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=97.81  E-value=9.4e-05  Score=54.19  Aligned_cols=70  Identities=16%  Similarity=0.275  Sum_probs=52.3

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC--hhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD--RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d--~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.||+..      .|++|++++.+|+.+|++|++++++..  ....+++.+.....                    .+  
T Consensus         1 ~~Ly~~~------~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~~--------------------~v--   52 (74)
T cd03045           1 IDLYYLP------GSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQH--------------------TV--   52 (74)
T ss_pred             CEEEeCC------CCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcCC--------------------CC--
Confidence            3689998      999999999999999999999888752  22345666543221                    34  


Q ss_pred             CCEEEECCeEEechHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~  218 (289)
                       |.+.++|..|-....+.+..
T Consensus        53 -P~l~~~~~~l~es~aI~~yL   72 (74)
T cd03045          53 -PTLVDNGFVLWESHAILIYL   72 (74)
T ss_pred             -CEEEECCEEEEcHHHHHHHH
Confidence             99998988887777666543

GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.

>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC

Probab=97.77  E-value=4.7e-05  Score=62.82  Aligned_cols=47  Identities=21%  Similarity=0.302  Sum_probs=41.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      .|+||+.+      .|..|++|+++|+++||+|+++|+..++--++||++++.
T Consensus         1 ~i~iy~~p------~C~~crkA~~~L~~~gi~~~~~d~~~~p~s~~eL~~~l~   47 (113)
T cd03033           1 DIIFYEKP------GCANNARQKALLEAAGHEVEVRDLLTEPWTAETLRPFFG   47 (113)
T ss_pred             CEEEEECC------CCHHHHHHHHHHHHcCCCcEEeehhcCCCCHHHHHHHHH
Confidence            37899999      999999999999999999999999987766777777654

It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.

>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors

Probab=97.70  E-value=0.00033  Score=53.84  Aligned_cols=53  Identities=25%  Similarity=0.391  Sum_probs=42.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC----CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF----GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~----gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      +|++|++.      .|.-|..|+.+|+..    ++.++++||+.|++    |.++.+.                     .
T Consensus         1 ~l~l~~k~------~C~LC~~a~~~L~~~~~~~~~~l~~vDI~~d~~----l~~~Y~~---------------------~   49 (81)
T PF05768_consen    1 TLTLYTKP------GCHLCDEAKEILEEVAAEFPFELEEVDIDEDPE----LFEKYGY---------------------R   49 (81)
T ss_dssp             -EEEEE-S------SSHHHHHHHHHHHHCCTTSTCEEEEEETTTTHH----HHHHSCT---------------------S
T ss_pred             CEEEEcCC------CCChHHHHHHHHHHHHhhcCceEEEEECCCCHH----HHHHhcC---------------------C
Confidence            58999999      999999999999964    46789999997754    6666553                     3


Q ss_pred             CCCCCEEEECC
Q 041824          195 PPVLPRVFVKG  205 (289)
Q Consensus       195 v~~LPqIFI~G  205 (289)
                      +   |.|+++|
T Consensus        50 I---PVl~~~~   57 (81)
T PF05768_consen   50 I---PVLHIDG   57 (81)
T ss_dssp             T---SEEEETT
T ss_pred             C---CEEEEcC
Confidence            4   9999999

Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.

>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1

Probab=97.68  E-value=0.00021  Score=52.90  Aligned_cols=36  Identities=36%  Similarity=0.547  Sum_probs=29.1

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----CC--CcEEEEEcCCCh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----FG--VAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~g--V~y~ErDVs~d~  160 (289)
                      +|+||+++      +|++|+.++.+|+.    ++  +.+..+|+..++
T Consensus         2 ~v~~f~~~------~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~~~   43 (82)
T TIGR00411         2 KIELFTSP------TCPYCPAAKRVVEEVAKEMGDAVEVEYINVMENP   43 (82)
T ss_pred             EEEEEECC------CCcchHHHHHHHHHHHHHhcCceEEEEEeCccCH
Confidence            58899999      99999999999864    44  667788887654

This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.

>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs

Probab=97.66  E-value=0.00026  Score=51.31  Aligned_cols=68  Identities=15%  Similarity=0.227  Sum_probs=50.6

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      .+|+..      .|++|.+++.+|+.+|++|++++|+...  ...+++.+....                       ..+
T Consensus         2 ~Ly~~~------~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~-----------------------~~v   52 (73)
T cd03056           2 KLYGFP------LSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPN-----------------------GEV   52 (73)
T ss_pred             EEEeCC------CCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCC-----------------------CCC
Confidence            688888      9999999999999999999999987532  233455543221                       134


Q ss_pred             CEEEECCeEEechHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRI  217 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L  217 (289)
                      |.+..+|..|.....+.+.
T Consensus        53 P~l~~~~~~i~es~aI~~y   71 (73)
T cd03056          53 PVLELDGRVLAESNAILVY   71 (73)
T ss_pred             CEEEECCEEEEcHHHHHHH
Confidence            9999999888777666543

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins

Probab=97.35  E-value=0.0019  Score=47.55  Aligned_cols=62  Identities=13%  Similarity=0.186  Sum_probs=48.3

Q ss_pred             CCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEEEECCeE
Q 041824          128 RGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRY  207 (289)
Q Consensus       128 rgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI~G~~  207 (289)
                      .++...|++|.+++.+|+.+||+|+.+++....         ....                      ..+|.+.++|+.
T Consensus        10 ~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~~---------~~p~----------------------g~vP~l~~~g~~   58 (72)
T cd03054          10 FGLPSLSPECLKVETYLRMAGIPYEVVFSSNPW---------RSPT----------------------GKLPFLELNGEK   58 (72)
T ss_pred             CCCCCCCHHHHHHHHHHHhCCCceEEEecCCcc---------cCCC----------------------cccCEEEECCEE
Confidence            455568999999999999999999999997532         1111                      134999999999


Q ss_pred             EechHHHHHHHHh
Q 041824          208 VGGAEEVLRIVEE  220 (289)
Q Consensus       208 IGG~del~~L~E~  220 (289)
                      +.+...+.+..++
T Consensus        59 l~es~~I~~yL~~   71 (72)
T cd03054          59 IADSEKIIEYLKK   71 (72)
T ss_pred             EcCHHHHHHHHhh
Confidence            9999888776543

Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.

>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]

Probab=97.33  E-value=0.00041  Score=57.87  Aligned_cols=47  Identities=21%  Similarity=0.386  Sum_probs=42.0

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      .|.||..+      .|.-|++|+++|+++||+|+++|+..++--++||++++.
T Consensus         2 ~itiy~~p------~C~t~rka~~~L~~~gi~~~~~~y~~~~~s~~eL~~~l~   48 (117)
T COG1393           2 MITIYGNP------NCSTCRKALAWLEEHGIEYTFIDYLKTPPSREELKKILS   48 (117)
T ss_pred             eEEEEeCC------CChHHHHHHHHHHHcCCCcEEEEeecCCCCHHHHHHHHH
Confidence            38999999      999999999999999999999999987767777777764

>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=97.27  E-value=0.0018  Score=47.76  Aligned_cols=71  Identities=10%  Similarity=0.036  Sum_probs=50.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      +.+|+..      .|++|.+++.+|+.+|++|++++++... ...+++++....                   ..+   |
T Consensus         1 ~~Ly~~~------~sp~~~~v~~~l~~~gl~~~~~~~~~~~-~~~~~~~~~p~~-------------------~~v---P   51 (74)
T cd03058           1 VKLLGAW------ASPFVLRVRIALALKGVPYEYVEEDLGN-KSELLLASNPVH-------------------KKI---P   51 (74)
T ss_pred             CEEEECC------CCchHHHHHHHHHHcCCCCEEEEeCccc-CCHHHHHhCCCC-------------------CCC---C
Confidence            3688888      8999999999999999999998886531 123344332110                   134   9


Q ss_pred             EEEECCeEEechHHHHHHHH
Q 041824          200 RVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       200 qIFI~G~~IGG~del~~L~E  219 (289)
                      .+..+|.-+.....+.+..+
T Consensus        52 ~l~~~~~~l~eS~aI~~yL~   71 (74)
T cd03058          52 VLLHNGKPICESLIIVEYID   71 (74)
T ss_pred             EEEECCEEeehHHHHHHHHH
Confidence            99888888887777766544

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,

>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli

Probab=97.25  E-value=0.00055  Score=55.88  Aligned_cols=46  Identities=22%  Similarity=0.316  Sum_probs=39.8

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      |+||+.+      .|.-|++|+++|+++|++|+++|+..++=-.+||.+++.
T Consensus         1 i~iy~~~------~C~t~rkA~~~L~~~~i~~~~~di~~~~~t~~el~~~l~   46 (112)
T cd03034           1 ITIYHNP------RCSKSRNALALLEEAGIEPEIVEYLKTPPTAAELRELLA   46 (112)
T ss_pred             CEEEECC------CCHHHHHHHHHHHHCCCCeEEEecccCCcCHHHHHHHHH
Confidence            5799999      999999999999999999999999887655666666654

E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.

>PHA02125 thioredoxin-like protein

Probab=97.25  E-value=0.0012  Score=49.66  Aligned_cols=42  Identities=21%  Similarity=0.309  Sum_probs=29.2

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      |++|+++      +|+.|+.++.+|+...  |..+||+.+.  ..++.+..+
T Consensus         2 iv~f~a~------wC~~Ck~~~~~l~~~~--~~~~~vd~~~--~~~l~~~~~   43 (75)
T PHA02125          2 IYLFGAE------WCANCKMVKPMLANVE--YTYVDVDTDE--GVELTAKHH   43 (75)
T ss_pred             EEEEECC------CCHhHHHHHHHHHHHh--heEEeeeCCC--CHHHHHHcC
Confidence            7899999      9999999999998654  4445554333  124554444

>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding

Probab=97.25  E-value=0.0024  Score=51.79  Aligned_cols=59  Identities=17%  Similarity=0.312  Sum_probs=38.6

Q ss_pred             HHHHHHH-hhhcCCCCCCCcEEEEE-ecCCCCCCCCHHHHHHHHHHHhCC-----CcEEEEEcCCChhHHHHHHHHHc
Q 041824          101 IKSVLER-FERICPPDGENKVVIYT-TTLRGIRKTYEACKAAKSVIENFG-----VAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       101 ~~~~l~~-f~~~~pp~~~~kVVVYt-tSLrgvR~tC~~C~~ak~iL~~~g-----V~y~ErDVs~d~~~reEL~~llg  171 (289)
                      +...|.. |.+.=  .....||||. ++      +|++|+.++.+|+...     |.|..+|++.++    ++.+..+
T Consensus         7 ~~~~~~~~~~~~l--~~~~~vvv~f~a~------wC~~C~~~~~~l~~la~~~~~i~~~~vd~d~~~----~l~~~~~   72 (113)
T cd02975           7 DRKALKEEFFKEM--KNPVDLVVFSSKE------GCQYCEVTKQLLEELSELSDKLKLEIYDFDEDK----EKAEKYG   72 (113)
T ss_pred             HHHHHHHHHHHHh--CCCeEEEEEeCCC------CCCChHHHHHHHHHHHHhcCceEEEEEeCCcCH----HHHHHcC
Confidence            3445554 54431  3344577774 56      9999999999998653     678889988654    4554444

PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.

>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins

Probab=97.24  E-value=0.0023  Score=47.10  Aligned_cols=71  Identities=11%  Similarity=0.045  Sum_probs=52.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.+|+..      .|++|.+++.+|+..|++|+.+.++...  ...++++++...                       ..
T Consensus         2 ~~Ly~~~------~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~-----------------------~~   52 (76)
T cd03053           2 LKLYGAA------MSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPF-----------------------GQ   52 (76)
T ss_pred             eEEEeCC------CChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCC-----------------------CC
Confidence            5788888      8999999999999999999998887532  122344443221                       23


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                      +|.+..+|..|.....+.+..+
T Consensus        53 vP~l~~~g~~l~es~aI~~yL~   74 (76)
T cd03053          53 IPALEDGDLKLFESRAITRYLA   74 (76)
T ss_pred             CCEEEECCEEEEcHHHHHHHHh
Confidence            4999999988888888777654

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t

>TIGR00014 arsC arsenate reductase (glutaredoxin)

Probab=97.24  E-value=0.00058  Score=56.02  Aligned_cols=46  Identities=17%  Similarity=0.266  Sum_probs=40.8

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      |.||+.+      .|.-|++|+++|+++|+.|+++|+..++=-.+||.+++.
T Consensus         1 i~iy~~~------~C~t~rkA~~~L~~~~i~~~~~di~~~p~t~~el~~~l~   46 (114)
T TIGR00014         1 VTIYHNP------RCSKSRNTLALLEDKGIEPEVVKYLKNPPTKSELEAIFA   46 (114)
T ss_pred             CEEEECC------CCHHHHHHHHHHHHCCCCeEEEeccCCCcCHHHHHHHHH
Confidence            5799999      999999999999999999999999987766777777664

composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.

>PRK10026 arsenate reductase; Provisional

Probab=97.22  E-value=0.00066  Score=58.49  Aligned_cols=48  Identities=17%  Similarity=0.243  Sum_probs=42.9

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      ..|.||+.+      .|.-|++|+++|+++|++|+++|+..++--.+||+.++.
T Consensus         2 ~~i~iY~~p------~Cst~RKA~~wL~~~gi~~~~~d~~~~ppt~~eL~~~l~   49 (141)
T PRK10026          2 SNITIYHNP------ACGTSRNTLEMIRNSGTEPTIIHYLETPPTRDELVKLIA   49 (141)
T ss_pred             CEEEEEeCC------CCHHHHHHHHHHHHCCCCcEEEeeeCCCcCHHHHHHHHH
Confidence            468999999      999999999999999999999999888766777777764

>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]

Probab=97.21  E-value=0.0014  Score=63.04  Aligned_cols=84  Identities=15%  Similarity=0.355  Sum_probs=61.8

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      =++|+|---      |||+|.+||++|+=+||+|..+.|+  +-.|+|++-                        .+...
T Consensus        89 L~l~LyQye------tCPFCcKVrAFLDyhgisY~VVEVn--pV~r~eIk~------------------------SsykK  136 (370)
T KOG3029|consen   89 LDLVLYQYE------TCPFCCKVRAFLDYHGISYAVVEVN--PVLRQEIKW------------------------SSYKK  136 (370)
T ss_pred             ceEEEEeec------cCchHHHHHHHHhhcCCceEEEEec--chhhhhccc------------------------ccccc
Confidence            479999998      9999999999999999999999986  444555542                        12334


Q ss_pred             CCEEEECCeEEechHHHHHHH------HhCcHHHHhccCCCc
Q 041824          198 LPRVFVKGRYVGGAEEVLRIV------EEGWFGELIEGIPIR  233 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~------E~G~L~~lL~~~~~~  233 (289)
                      +|.+.|+|+-+-...-+..+.      ..-.|.++++-.|..
T Consensus       137 VPil~~~Geqm~dSsvIIs~laTyLq~~~q~l~eiiq~yPa~  178 (370)
T KOG3029|consen  137 VPILLIRGEQMVDSSVIISLLATYLQDKRQDLGEIIQMYPAT  178 (370)
T ss_pred             ccEEEeccceechhHHHHHHHHHHhccCCCCHHHHHHhcccc
Confidence            499999888665554444433      334588888877754

>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides

Probab=97.19  E-value=0.0011  Score=52.25  Aligned_cols=61  Identities=15%  Similarity=0.247  Sum_probs=45.8

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESS  190 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t  190 (289)
                      +.-+|.+|+++      +|++|..++++++..     +|.|..+|++..+    ++.+..+-                  
T Consensus        12 ~pv~i~~F~~~------~C~~C~~~~~~~~~l~~~~~~i~~~~vd~~~~~----e~a~~~~V------------------   63 (89)
T cd03026          12 GPINFETYVSL------SCHNCPDVVQALNLMAVLNPNIEHEMIDGALFQ----DEVEERGI------------------   63 (89)
T ss_pred             CCEEEEEEECC------CCCCcHHHHHHHHHHHHHCCCceEEEEEhHhCH----HHHHHcCC------------------
Confidence            34469999998      999999999988764     7899999998654    33333343                  


Q ss_pred             CCCCCCCCCEEEECCeEEe
Q 041824          191 VQPLPPVLPRVFVKGRYVG  209 (289)
Q Consensus       191 ~~~tv~~LPqIFI~G~~IG  209 (289)
                           ..+|.++|||+.++
T Consensus        64 -----~~vPt~vidG~~~~   77 (89)
T cd03026          64 -----MSVPAIFLNGELFG   77 (89)
T ss_pred             -----ccCCEEEECCEEEE
Confidence                 23499999998765

AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.

>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells

Probab=97.13  E-value=0.0021  Score=48.30  Aligned_cols=69  Identities=17%  Similarity=0.184  Sum_probs=51.7

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh--HHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG--FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~--~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +++|...      .+++|.+++.+|+.+|++|+.+.+.....  ..+++.++....                    .+  
T Consensus         1 ~~ly~~~------~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~g--------------------~v--   52 (73)
T cd03052           1 LVLYHWT------QSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPTG--------------------EV--   52 (73)
T ss_pred             CEEecCC------CCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcCC--------------------CC--
Confidence            4688888      89999999999999999999988865322  234566553321                    45  


Q ss_pred             CCEEEECCeEEechHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRI  217 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L  217 (289)
                       |.+..||..|.....+.+.
T Consensus        53 -P~L~~~g~~l~Es~aI~~y   71 (73)
T cd03052          53 -PVLIHGDNIICDPTQIIDY   71 (73)
T ss_pred             -CEEEECCEEEEcHHHHHHH
Confidence             9999899888777776654

More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.

>PRK10853 putative reductase; Provisional

Probab=97.12  E-value=0.0008  Score=55.92  Aligned_cols=46  Identities=22%  Similarity=0.255  Sum_probs=40.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      |+||+.+      .|.-|++|+++|+++||+|+++|+-.++--.+||++++.
T Consensus         2 i~iy~~~------~C~t~rkA~~~L~~~~i~~~~~d~~k~p~s~~eL~~~l~   47 (118)
T PRK10853          2 VTLYGIK------NCDTIKKARRWLEAQGIDYRFHDYRVDGLDSELLQGFID   47 (118)
T ss_pred             EEEEcCC------CCHHHHHHHHHHHHcCCCcEEeehccCCcCHHHHHHHHH
Confidence            7899999      999999999999999999999999887766777777664

>TIGR01616 nitro_assoc nitrogenase-associated protein

Probab=97.12  E-value=0.00089  Score=56.43  Aligned_cols=46  Identities=15%  Similarity=0.270  Sum_probs=39.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHH
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELM  170 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~ll  170 (289)
                      .|+||..+      .|.-|++|+++|+++||+|+++|+-.++--++||+.++
T Consensus         2 ~i~iY~~p------~Cst~RKA~~~L~~~gi~~~~~d~~~~p~t~~eL~~~l   47 (126)
T TIGR01616         2 TIIFYEKP------GCANNARQKAALKASGHDVEVQDILKEPWHADTLRPYF   47 (126)
T ss_pred             eEEEEeCC------CCHHHHHHHHHHHHCCCCcEEEeccCCCcCHHHHHHHH
Confidence            47899999      99999999999999999999999987765566666554

This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.

>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins

Probab=97.08  E-value=0.0069  Score=48.52  Aligned_cols=78  Identities=19%  Similarity=0.294  Sum_probs=55.8

Q ss_pred             cEEEEEecCCC--CCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRG--IRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrg--vR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      .|-+|.+.-++  -...|++|++++.+|..+||+|+.++|++... -+.+.++.-..                    .+ 
T Consensus         5 ~~el~vka~~~~~~~g~cpf~~rvrl~L~eKgi~ye~~~vd~~~~-p~~~~~~nP~g--------------------~v-   62 (91)
T cd03061           5 EIELFVKASSDGESIGNCPFCQRLFMVLWLKGVVFNVTTVDMKRK-PEDLKDLAPGT--------------------QP-   62 (91)
T ss_pred             cEEEEEEeccCCCCCCCChhHHHHHHHHHHCCCceEEEEeCCCCC-CHHHHHhCCCC--------------------CC-
Confidence            46677665432  24689999999999999999999988876432 13444443211                    34 


Q ss_pred             CCCEEEECCeEEechHHHHHHHHh
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E~  220 (289)
                        |.+..+|..|...+.+.++.++
T Consensus        63 --PvL~~~~~~i~eS~~I~eYLde   84 (91)
T cd03061          63 --PFLLYNGEVKTDNNKIEEFLEE   84 (91)
T ss_pred             --CEEEECCEEecCHHHHHHHHHH
Confidence              9999999999888888776653

They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI

>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=97.04  E-value=0.0026  Score=46.12  Aligned_cols=68  Identities=12%  Similarity=0.213  Sum_probs=48.9

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      .+|+..      .++.|.+++.+|+.+||+|+.+.+++..  ...+++++....                       ..+
T Consensus         2 ~L~~~~------~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~-----------------------~~v   52 (73)
T cd03042           2 ILYSYF------RSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQ-----------------------GLV   52 (73)
T ss_pred             EEecCC------CCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCC-----------------------CCC
Confidence            577777      7789999999999999999998887632  223455544221                       234


Q ss_pred             CEEEECCeEEechHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRI  217 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L  217 (289)
                      |.+..+|..+.....+.+.
T Consensus        53 P~l~~~~~~l~es~aI~~y   71 (73)
T cd03042          53 PTLVIDGLVLTQSLAIIEY   71 (73)
T ss_pred             CEEEECCEEEEcHHHHHHH
Confidence            9999999888777666554

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.

>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2

Probab=97.04  E-value=0.0021  Score=48.69  Aligned_cols=31  Identities=26%  Similarity=0.543  Sum_probs=26.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHH----HHHHHhCCCcEEEEEcC
Q 041824          120 VVIYTTTLRGIRKTYEACKAA----KSVIENFGVAVSERDVS  157 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~a----k~iL~~~gV~y~ErDVs  157 (289)
                      |.+|+ +      +|+.|+.+    ++++++++++++.++|+
T Consensus         3 i~~~a-~------~C~~C~~~~~~~~~~~~e~~~~~~~~~v~   37 (76)
T TIGR00412         3 IQIYG-T------GCANCQMTEKNVKKAVEELGIDAEFEKVT   37 (76)
T ss_pred             EEEEC-C------CCcCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence            66776 7      99999999    67888899999999998

This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.

>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B

Probab=96.95  E-value=0.005  Score=46.52  Aligned_cols=55  Identities=24%  Similarity=0.441  Sum_probs=37.3

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHH----HHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKS----VIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~----iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      |.+ .++      +|++|.++.+    ++..+++.++.+|+. +   .+++ ...|-                       
T Consensus         3 I~v-~~~------~C~~C~~~~~~~~~~~~~~~i~~ei~~~~-~---~~~~-~~ygv-----------------------   47 (76)
T PF13192_consen    3 IKV-FSP------GCPYCPELVQLLKEAAEELGIEVEIIDIE-D---FEEI-EKYGV-----------------------   47 (76)
T ss_dssp             EEE-ECS------SCTTHHHHHHHHHHHHHHTTEEEEEEETT-T---HHHH-HHTT------------------------
T ss_pred             EEE-eCC------CCCCcHHHHHHHHHHHHhcCCeEEEEEcc-C---HHHH-HHcCC-----------------------
Confidence            555 466      8999996666    556789999999983 3   2344 33342                       


Q ss_pred             CCCCEEEECCe--EEe
Q 041824          196 PVLPRVFVKGR--YVG  209 (289)
Q Consensus       196 ~~LPqIFI~G~--~IG  209 (289)
                      ..+|.|+|||+  +.|
T Consensus        48 ~~vPalvIng~~~~~G   63 (76)
T PF13192_consen   48 MSVPALVINGKVVFVG   63 (76)
T ss_dssp             SSSSEEEETTEEEEES
T ss_pred             CCCCEEEECCEEEEEe
Confidence            34499999998  445

...

>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=96.87  E-value=0.0074  Score=44.82  Aligned_cols=69  Identities=16%  Similarity=0.203  Sum_probs=50.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      +++|...      .++.|.+++.+|...|++|+.+.++.+ ...++++....                       ...+|
T Consensus         2 ~~Ly~~~------~~~~~~~v~~~L~~~~i~~e~~~v~~~-~~~~~~~~~~p-----------------------~~~vP   51 (73)
T cd03076           2 YTLTYFP------VRGRAEAIRLLLADQGISWEEERVTYE-EWQESLKPKML-----------------------FGQLP   51 (73)
T ss_pred             cEEEEeC------CcchHHHHHHHHHHcCCCCEEEEecHH-HhhhhhhccCC-----------------------CCCCC
Confidence            5788877      689999999999999999999988752 22333332211                       12349


Q ss_pred             EEEECCeEEechHHHHHHH
Q 041824          200 RVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       200 qIFI~G~~IGG~del~~L~  218 (289)
                      .+..+|..|.....+.+..
T Consensus        52 ~l~~~~~~l~es~aI~~yL   70 (73)
T cd03076          52 CFKDGDLTLVQSNAILRHL   70 (73)
T ss_pred             EEEECCEEEEcHHHHHHHH
Confidence            9999999888887777654

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w

>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha

Probab=96.80  E-value=0.0064  Score=44.57  Aligned_cols=68  Identities=12%  Similarity=0.185  Sum_probs=47.2

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCE
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPR  200 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPq  200 (289)
                      ++|...      .++.|.+++.+|+.+|++|+.+.++.......++....             +          ...+|.
T Consensus         2 ~Ly~~~------~~~~~~~v~~~l~~~gi~~e~~~~~~~~~~~~~~~~~~-------------p----------~~~vP~   52 (72)
T cd03039           2 KLTYFN------IRGRGEPIRLLLADAGVEYEDVRITYEEWPELDLKPTL-------------P----------FGQLPV   52 (72)
T ss_pred             EEEEEc------CcchHHHHHHHHHHCCCCcEEEEeCHHHhhhhhhccCC-------------c----------CCCCCE
Confidence            577777      77999999999999999999998864321111111111             1          123499


Q ss_pred             EEECCeEEechHHHHHH
Q 041824          201 VFVKGRYVGGAEEVLRI  217 (289)
Q Consensus       201 IFI~G~~IGG~del~~L  217 (289)
                      +..+|..|.....+.+.
T Consensus        53 L~~~~~~l~es~aI~~y   69 (72)
T cd03039          53 LEIDGKKLTQSNAILRY   69 (72)
T ss_pred             EEECCEEEEecHHHHHH
Confidence            99999888877776654

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma

>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs

Probab=96.78  E-value=0.0056  Score=44.89  Aligned_cols=67  Identities=12%  Similarity=0.025  Sum_probs=47.5

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHh--CCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIEN--FGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~--~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      .+|...      .|++|.+++.+|+.  +|++|+.+.++.. ...+++.+....                    ..+   
T Consensus         2 ~Ly~~~------~s~~~~~~~~~l~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~--------------------~~v---   51 (73)
T cd03049           2 KLLYSP------TSPYVRKVRVAAHETGLGDDVELVLVNPW-SDDESLLAVNPL--------------------GKI---   51 (73)
T ss_pred             EEecCC------CCcHHHHHHHHHHHhCCCCCcEEEEcCcc-cCChHHHHhCCC--------------------CCC---
Confidence            578877      89999999999999  8999999988742 122344443221                    134   


Q ss_pred             CEEEE-CCeEEechHHHHHH
Q 041824          199 PRVFV-KGRYVGGAEEVLRI  217 (289)
Q Consensus       199 PqIFI-~G~~IGG~del~~L  217 (289)
                      |.+.. ||..|.....+.+.
T Consensus        52 P~l~~~~g~~l~es~aI~~y   71 (73)
T cd03049          52 PALVLDDGEALFDSRVICEY   71 (73)
T ss_pred             CEEEECCCCEEECHHHHHhh
Confidence            99875 77777776666554

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs

Probab=96.78  E-value=0.0079  Score=45.05  Aligned_cols=70  Identities=16%  Similarity=0.161  Sum_probs=50.4

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC--hhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD--RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d--~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.+|...      . ++|.+++.+|+..|++|+.+.+...  ....+++.++...                    ..+  
T Consensus         2 ~~Ly~~~------~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~--------------------~~v--   52 (81)
T cd03048           2 ITLYTHG------T-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPN--------------------GRI--   52 (81)
T ss_pred             eEEEeCC------C-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcC--------------------CCC--
Confidence            5788876      6 9999999999999999998777642  2234555554322                    134  


Q ss_pred             CCEEEEC---CeEEechHHHHHHHH
Q 041824          198 LPRVFVK---GRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~---G~~IGG~del~~L~E  219 (289)
                       |.+..+   |..|.....+.+..+
T Consensus        53 -P~l~~~~~~g~~l~eS~aI~~yL~   76 (81)
T cd03048          53 -PAIVDHNGTPLTVFESGAILLYLA   76 (81)
T ss_pred             -CEEEeCCCCceEEEcHHHHHHHHH
Confidence             999887   788887777766543

Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and

>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=96.77  E-value=0.0039  Score=49.23  Aligned_cols=35  Identities=14%  Similarity=0.274  Sum_probs=31.6

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD  159 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d  159 (289)
                      +-++|.+.      .||+|..+++.|++.+|+|+++||...
T Consensus         3 kp~lfgsn------~Cpdca~a~eyl~rl~v~yd~VeIt~S   37 (85)
T COG4545           3 KPKLFGSN------LCPDCAPAVEYLERLNVDYDFVEITES   37 (85)
T ss_pred             Cceeeccc------cCcchHHHHHHHHHcCCCceeeehhhh
Confidence            34789999      999999999999999999999999753

>PRK10387 glutaredoxin 2; Provisional

Probab=96.75  E-value=0.0068  Score=52.54  Aligned_cols=70  Identities=13%  Similarity=0.213  Sum_probs=51.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      +.+|+..      .|++|.+|+.+|+.+||+|+.++++.... ... .+..+.                    .++   |
T Consensus         1 ~~Ly~~~------~sp~~~kv~~~L~~~gi~y~~~~~~~~~~-~~~-~~~~p~--------------------~~V---P   49 (210)
T PRK10387          1 MKLYIYD------HCPFCVKARMIFGLKNIPVELIVLANDDE-ATP-IRMIGQ--------------------KQV---P   49 (210)
T ss_pred             CEEEeCC------CCchHHHHHHHHHHcCCCeEEEEcCCCch-hhH-HHhcCC--------------------ccc---c
Confidence            4689888      89999999999999999999999865432 112 122211                    145   9


Q ss_pred             EE-EECCeEEechHHHHHHHHh
Q 041824          200 RV-FVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       200 qI-FI~G~~IGG~del~~L~E~  220 (289)
                      .| ..+|..|.....+.+..++
T Consensus        50 vL~~~~g~~l~eS~aI~~yL~~   71 (210)
T PRK10387         50 ILQKDDGSYMPESLDIVHYIDE   71 (210)
T ss_pred             eEEecCCeEecCHHHHHHHHHH
Confidence            98 5688999998888876654

>TIGR02182 GRXB Glutaredoxin, GrxB family

Probab=96.65  E-value=0.0071  Score=53.58  Aligned_cols=68  Identities=12%  Similarity=0.181  Sum_probs=50.3

Q ss_pred             EEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEE
Q 041824          122 IYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRV  201 (289)
Q Consensus       122 VYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqI  201 (289)
                      +|+..      .|++|.+|+.+|..+|++|+.+++..+.. ... .+..+.                    .++   |.+
T Consensus         2 Ly~~~------~sp~~~kvr~~L~~~gl~~e~~~~~~~~~-~~~-~~~np~--------------------g~v---P~l   50 (209)
T TIGR02182         2 LYIYD------HCPFCVRARMIFGLKNIPVEKHVLLNDDE-ETP-IRMIGA--------------------KQV---PIL   50 (209)
T ss_pred             eecCC------CCChHHHHHHHHHHcCCCeEEEECCCCcc-hhH-HHhcCC--------------------CCc---ceE
Confidence            67777      89999999999999999999998865432 111 222111                    134   999


Q ss_pred             E-ECCeEEechHHHHHHHHh
Q 041824          202 F-VKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       202 F-I~G~~IGG~del~~L~E~  220 (289)
                      . .||..|.+...+.+..++
T Consensus        51 ~~~~g~~l~es~~I~~yL~~   70 (209)
T TIGR02182        51 QKDDGRAMPESLDIVAYFDK   70 (209)
T ss_pred             EeeCCeEeccHHHHHHHHHH
Confidence            7 788999999888886654

This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.

>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []

Probab=96.47  E-value=0.007  Score=48.85  Aligned_cols=43  Identities=28%  Similarity=0.396  Sum_probs=31.2

Q ss_pred             EEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          123 YTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       123 YttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      |..+      .|.-|++|+++|+++||.|+++|+..++--++||.+++.
T Consensus         1 Y~~~------~C~t~rka~~~L~~~gi~~~~~d~~k~p~s~~el~~~l~   43 (110)
T PF03960_consen    1 YGNP------NCSTCRKALKWLEENGIEYEFIDYKKEPLSREELRELLS   43 (110)
T ss_dssp             EE-T------T-HHHHHHHHHHHHTT--EEEEETTTS---HHHHHHHHH
T ss_pred             CcCC------CCHHHHHHHHHHHHcCCCeEeehhhhCCCCHHHHHHHHH
Confidence            6666      999999999999999999999999987766677776654

This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=96.42  E-value=0.003  Score=52.68  Aligned_cols=54  Identities=22%  Similarity=0.584  Sum_probs=41.5

Q ss_pred             cCCcccCCCCceeEeCCCCCCcceeeeccCCCCccccccCCccCcCCcccCCCCC
Q 041824          235 LKGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVLCPLCS  289 (289)
Q Consensus       235 ~~~~C~~Cgg~rfvpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLvrCp~C~  289 (289)
                      ....|..|.|.+...|..|+|+-.+..... .......+|+.|+-.|.+.|+.|.
T Consensus        40 ~~v~C~~C~GsG~~~C~~C~G~G~v~~~~~-g~~q~~~~C~~C~G~Gk~~C~~C~   93 (111)
T PLN03165         40 NTQPCFPCSGTGAQVCRFCVGSGNVTVELG-GGEKEVSKCINCDGAGSLTCTTCQ   93 (111)
T ss_pred             cCCCCCCCCCCCCcCCCCCcCcCeEEEEeC-CcEEEEEECCCCCCcceeeCCCCC
Confidence            356789998888889999999976654321 122346799999999999999983

>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative

Probab=96.30  E-value=0.035  Score=45.93  Aligned_cols=38  Identities=11%  Similarity=0.123  Sum_probs=28.1

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHH----HhCCCcEEEEEcCCCh
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVI----ENFGVAVSERDVSMDR  160 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL----~~~gV~y~ErDVs~d~  160 (289)
                      +.-||.|+.+      ||++|+.+.-+|    +..++++..+|++.+.
T Consensus        24 ~~~iv~f~~~------~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd~~~   65 (122)
T TIGR01295        24 ETATFFIGRK------TCPYCRKFSGTLSGVVAQTKAPIYYIDSENNG   65 (122)
T ss_pred             CcEEEEEECC------CChhHHHHhHHHHHHHHhcCCcEEEEECCCcc
Confidence            3346666777      999999965555    4567889999998654

This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.

>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs

Probab=96.28  E-value=0.037  Score=41.14  Aligned_cols=69  Identities=13%  Similarity=0.250  Sum_probs=49.5

Q ss_pred             EEEEEec-CCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          120 VVIYTTT-LRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       120 VVVYttS-LrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      ++||... -.+....+++|.+|+.+|+..|++|+.+.++.-        ....                    .   ..+
T Consensus         2 ~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~~--------~~~p--------------------~---g~v   50 (75)
T cd03080           2 ITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGLA--------KRSP--------------------K---GKL   50 (75)
T ss_pred             EEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCcc--------cCCC--------------------C---CCC
Confidence            4556554 234455789999999999999999998888631        1111                    1   234


Q ss_pred             CEEEECCeEEechHHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E  219 (289)
                      |.+..+|+.|.....+.+..+
T Consensus        51 Pvl~~~g~~l~eS~~I~~yL~   71 (75)
T cd03080          51 PFIELNGEKIADSELIIDHLE   71 (75)
T ss_pred             CEEEECCEEEcCHHHHHHHHH
Confidence            999999999998888777554

Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele

>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase

Probab=96.23  E-value=0.034  Score=41.12  Aligned_cols=71  Identities=10%  Similarity=0.175  Sum_probs=49.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +++|...      ..+.|++++.+|+..|++|+.+.++...  ...+++.++...                       ..
T Consensus         1 ~~ly~~~------~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~-----------------------~~   51 (76)
T cd03050           1 LKLYYDL------MSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPF-----------------------GK   51 (76)
T ss_pred             CEEeeCC------CChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcC-----------------------CC
Confidence            3588888      8899999999999999999988886422  122344443221                       23


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                      +|.+..+|..|-....+.+..+
T Consensus        52 vP~L~~~~~~l~eS~aI~~Yl~   73 (76)
T cd03050          52 VPAIVDGDFTLAESVAILRYLA   73 (76)
T ss_pred             CCEEEECCEEEEcHHHHHHHHH
Confidence            3999888887777666665543

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC

>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor

Probab=96.20  E-value=0.015  Score=44.04  Aligned_cols=75  Identities=13%  Similarity=0.131  Sum_probs=50.8

Q ss_pred             EEEEec-CCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh--HHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          121 VIYTTT-LRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG--FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       121 VVYttS-LrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~--~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .+|+.. ..+.+..+++|.+++.+|..+||+|+.+.++....  ..+++ ....                    .   ..
T Consensus         2 ~~~~~~~~~~~~~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p--------------------~---~~   57 (84)
T cd03038           2 TLYDLAGKDPVRAFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGG--------------------F---YT   57 (84)
T ss_pred             eeEeccCCCCCCCcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCC--------------------C---ce
Confidence            455442 23567789999999999999999999988875321  11122 1111                    1   23


Q ss_pred             CCEEEEC-CeEEechHHHHHHHH
Q 041824          198 LPRVFVK-GRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~-G~~IGG~del~~L~E  219 (289)
                      +|.+..+ |+.|.....+.+..+
T Consensus        58 vP~L~~~~~~~l~eS~aI~~yL~   80 (84)
T cd03038          58 VPVIVDGSGEVIGDSFAIAEYLE   80 (84)
T ss_pred             eCeEEECCCCEEeCHHHHHHHHH
Confidence            3999888 899988888877654

This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.

>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold

Probab=96.17  E-value=0.02  Score=37.25  Aligned_cols=40  Identities=28%  Similarity=0.467  Sum_probs=32.8

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHH-----hCCCcEEEEEcCCChhHHHH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIE-----NFGVAVSERDVSMDRGFKEE  165 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~-----~~gV~y~ErDVs~d~~~reE  165 (289)
                      |++|..+      +|++|.+++..|+     ..++.+..+|+.......+.
T Consensus         1 l~~~~~~------~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   45 (69)
T cd01659           1 LVLFYAP------WCPFCQALRPVLAELALLNKGVKFEAVDVDEDPALEKE   45 (69)
T ss_pred             CEEEECC------CChhHHhhhhHHHHHHhhCCCcEEEEEEcCCChHHhhH
Confidence            4677777      9999999999999     67899999999877654443

Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.

>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs

Probab=96.02  E-value=0.045  Score=40.73  Aligned_cols=66  Identities=12%  Similarity=0.072  Sum_probs=48.0

Q ss_pred             CCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh-hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEEEECCeE
Q 041824          129 GIRKTYEACKAAKSVIENFGVAVSERDVSMDR-GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRY  207 (289)
Q Consensus       129 gvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~-~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI~G~~  207 (289)
                      |.+..++++.+++-+|+.+||+|+.+.+.... ...+++++....                       ..+|.+..+|..
T Consensus         5 ~~~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~~~~~~~~~~nP~-----------------------g~vP~L~~~g~~   61 (73)
T cd03043           5 GNKNYSSWSLRPWLLLKAAGIPFEEILVPLYTPDTRARILEFSPT-----------------------GKVPVLVDGGIV   61 (73)
T ss_pred             cCCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCccccHHHHhhCCC-----------------------CcCCEEEECCEE
Confidence            56779999999999999999999998887532 123444443221                       234999999988


Q ss_pred             EechHHHHHH
Q 041824          208 VGGAEEVLRI  217 (289)
Q Consensus       208 IGG~del~~L  217 (289)
                      |.....+.++
T Consensus        62 l~eS~aI~~Y   71 (73)
T cd03043          62 VWDSLAICEY   71 (73)
T ss_pred             EEcHHHHHHH
Confidence            8777666553

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>PRK09481 sspA stringent starvation protein A; Provisional

Probab=95.99  E-value=0.039  Score=48.57  Aligned_cols=71  Identities=14%  Similarity=0.194  Sum_probs=53.0

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      ..+.+|+..      .|++|.+++-+|+..||+|+.+.|+.. ...+++.++.-.                    ..+  
T Consensus         9 ~~~~Ly~~~------~s~~~~rv~~~L~e~gl~~e~~~v~~~-~~~~~~~~~nP~--------------------g~V--   59 (211)
T PRK09481          9 SVMTLFSGP------TDIYSHQVRIVLAEKGVSVEIEQVEKD-NLPQDLIDLNPY--------------------QSV--   59 (211)
T ss_pred             CeeEEeCCC------CChhHHHHHHHHHHCCCCCEEEeCCcc-cCCHHHHHhCCC--------------------CCC--
Confidence            358899988      899999999999999999999988753 123455554221                    134  


Q ss_pred             CCEEEECCeEEechHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~  218 (289)
                       |.+..+|..|--...+.+..
T Consensus        60 -PvL~~~g~~l~ES~AIl~YL   79 (211)
T PRK09481         60 -PTLVDRELTLYESRIIMEYL   79 (211)
T ss_pred             -CEEEECCEEeeCHHHHHHHH
Confidence             99999998887776666544

>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis

Probab=95.96  E-value=0.036  Score=41.14  Aligned_cols=69  Identities=13%  Similarity=0.024  Sum_probs=48.5

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh-HHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG-FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~-~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      .+|+..      .|++|.+++-+|+..|++|+.++|+...+ ..++++++...                    ..+   |
T Consensus         2 ~Ly~~~------~~~~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~nP~--------------------~~v---P   52 (75)
T cd03044           2 TLYTYP------GNPRSLKILAAAKYNGLDVEIVDFQPGKENKTPEFLKKFPL--------------------GKV---P   52 (75)
T ss_pred             eEecCC------CCccHHHHHHHHHHcCCceEEEecccccccCCHHHHHhCCC--------------------CCC---C
Confidence            467777      88999999999999999999998886432 22445544221                    134   9


Q ss_pred             EEEEC-CeEEechHHHHHHH
Q 041824          200 RVFVK-GRYVGGAEEVLRIV  218 (289)
Q Consensus       200 qIFI~-G~~IGG~del~~L~  218 (289)
                      .+..+ |..|-....+.++.
T Consensus        53 ~L~~~~g~~l~es~aI~~yL   72 (75)
T cd03044          53 AFEGADGFCLFESNAIAYYV   72 (75)
T ss_pred             EEEcCCCCEEeeHHHHHHHH
Confidence            99884 77776666665543

EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot

>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains

Probab=95.74  E-value=0.058  Score=41.80  Aligned_cols=36  Identities=28%  Similarity=0.520  Sum_probs=28.1

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh------CCCcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN------FGVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~------~gV~y~ErDVs~d~~  161 (289)
                      +++|+++      +|+.|+.+..+|+.      .++.|..+|++.+++
T Consensus        17 lv~f~a~------~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d~~~~   58 (97)
T cd02949          17 LVLYTSP------TCGPCRTLKPILNKVIDEFDGAVHFVEIDIDEDQE   58 (97)
T ss_pred             EEEEECC------CChhHHHHHHHHHHHHHHhCCceEEEEEECCCCHH
Confidence            4556666      99999999998876      457788999887654

The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.

>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains

Probab=95.70  E-value=0.047  Score=39.40  Aligned_cols=37  Identities=27%  Similarity=0.302  Sum_probs=30.2

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh-----CCCcEEEEEcCCChhH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN-----FGVAVSERDVSMDRGF  162 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~-----~gV~y~ErDVs~d~~~  162 (289)
                      +++|+++      +|+.|..++.+|+.     .++.|..+|++.+..+
T Consensus        14 ll~~~~~------~C~~C~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   55 (93)
T cd02947          14 VVDFWAP------WCGPCKAIAPVLEELAEEYPKVKFVKVDVDENPEL   55 (93)
T ss_pred             EEEEECC------CChhHHHhhHHHHHHHHHCCCceEEEEECCCChhH
Confidence            5566666      99999999999988     7889999999875543

Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio

>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S

Probab=95.68  E-value=0.053  Score=39.56  Aligned_cols=69  Identities=7%  Similarity=0.017  Sum_probs=47.4

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      .+|+..      . ..+.+++.+|+..|++|+.+.++...  ...+++.++...                       ..+
T Consensus         2 ~l~~~~------~-~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~-----------------------~~v   51 (76)
T cd03046           2 TLYHLP------R-SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPL-----------------------GKV   51 (76)
T ss_pred             EEEeCC------C-CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCC-----------------------CCC
Confidence            466654      3 45789999999999999988886531  223444443221                       234


Q ss_pred             CEEEECCeEEechHHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E  219 (289)
                      |.+..+|..|.....+.+..+
T Consensus        52 P~l~~~g~~l~es~aI~~yL~   72 (76)
T cd03046          52 PVLVDGDLVLTESAAIILYLA   72 (76)
T ss_pred             CEEEECCEEEEcHHHHHHHHH
Confidence            999999998988888777654

cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb

>TIGR00862 O-ClC intracellular chloride channel protein

Probab=95.59  E-value=0.096  Score=48.42  Aligned_cols=77  Identities=14%  Similarity=0.163  Sum_probs=56.2

Q ss_pred             EEEEEecCCCCC--CCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIR--KTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR--~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      |.+|.+.-..-+  ..|++|++|+.+|..+||+|+.+.|+.... .+++.++....                    .+  
T Consensus         3 ~el~~ka~~~~~~~~~cp~~~rv~i~L~ekgi~~e~~~vd~~~~-~~~fl~inP~g--------------------~v--   59 (236)
T TIGR00862         3 IELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRK-PEDLQNLAPGT--------------------HP--   59 (236)
T ss_pred             eEEEEecCCCCCcCCCCHhHHHHHHHHHHcCCCcEEEEECCCCC-CHHHHHHCcCC--------------------CC--
Confidence            567777632222  589999999999999999999988876432 34555543221                    34  


Q ss_pred             CCEEEECCeEEechHHHHHHHHh
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E~  220 (289)
                       |.+..+|..|.....+.++.++
T Consensus        60 -PvL~~~g~~l~ES~aI~eYL~e   81 (236)
T TIGR00862        60 -PFLTYNTEVKTDVNKIEEFLEE   81 (236)
T ss_pred             -CEEEECCEEeecHHHHHHHHHH
Confidence             9998899999988888887664

These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.

>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B

Probab=95.57  E-value=0.032  Score=41.29  Aligned_cols=65  Identities=17%  Similarity=0.177  Sum_probs=46.9

Q ss_pred             CCHHHHHHHHHHHhCCCcEEEEEcCC--Ch-hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEEEE-CCeEE
Q 041824          133 TYEACKAAKSVIENFGVAVSERDVSM--DR-GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFV-KGRYV  208 (289)
Q Consensus       133 tC~~C~~ak~iL~~~gV~y~ErDVs~--d~-~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI-~G~~I  208 (289)
                      .||++++++-+|+.+|++|+..-+..  +. ...+++.++.+..                    ++   |.+.. +|+.|
T Consensus         1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~~--------------------~V---P~L~~~~g~vi   57 (70)
T PF13409_consen    1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPRG--------------------KV---PVLVDPDGTVI   57 (70)
T ss_dssp             T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT---------------------SS---SEEEETTTEEE
T ss_pred             CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcCe--------------------EE---EEEEECCCCEe
Confidence            48999999999999999998766632  11 1225666664431                    45   99998 89999


Q ss_pred             echHHHHHHHHh
Q 041824          209 GGAEEVLRIVEE  220 (289)
Q Consensus       209 GG~del~~L~E~  220 (289)
                      .....+.++.++
T Consensus        58 ~eS~~I~~yL~~   69 (70)
T PF13409_consen   58 NESLAILEYLEE   69 (70)
T ss_dssp             ESHHHHHHHHHH
T ss_pred             eCHHHHHHHHhc
Confidence            998888876653

...

>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD

Probab=95.45  E-value=0.057  Score=42.06  Aligned_cols=48  Identities=17%  Similarity=0.150  Sum_probs=31.2

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHH-------HhC--CCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVI-------ENF--GVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL-------~~~--gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      -+|.|+++      +|++|++....+       +.+  ++.+-.+|++.+.....++.+..+.
T Consensus        14 vlv~f~a~------wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~i   70 (104)
T cd02953          14 VFVDFTAD------WCVTCKVNEKVVFSDPEVQAALKKDVVLLRADWTKNDPEITALLKRFGV   70 (104)
T ss_pred             EEEEEEcc------hhHHHHHHHHHhcCCHHHHHHHhCCeEEEEEecCCCCHHHHHHHHHcCC
Confidence            35667777      999999887443       111  5777788887665444556655543

It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.

>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=95.43  E-value=0.08  Score=39.08  Aligned_cols=68  Identities=12%  Similarity=0.218  Sum_probs=46.3

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      .+|+..      .+ .+.+++.+|..+|++|+.++++...  ...++++++....                    .+   
T Consensus         2 ~Ly~~~------~~-~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~~--------------------~v---   51 (77)
T cd03057           2 KLYYSP------GA-CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPKG--------------------QV---   51 (77)
T ss_pred             EEEeCC------CC-chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCCC--------------------CC---
Confidence            477766      44 4789999999999999988876532  2245566543321                    34   


Q ss_pred             CEEEEC-CeEEechHHHHHHH
Q 041824          199 PRVFVK-GRYVGGAEEVLRIV  218 (289)
Q Consensus       199 PqIFI~-G~~IGG~del~~L~  218 (289)
                      |.+..+ |..+.....+.+..
T Consensus        52 P~l~~~~g~~l~eS~aI~~yL   72 (77)
T cd03057          52 PALVLDDGEVLTESAAILQYL   72 (77)
T ss_pred             CEEEECCCcEEEcHHHHHHHH
Confidence            988887 77777776666554

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.

>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs

Probab=95.32  E-value=0.1  Score=38.27  Aligned_cols=68  Identities=10%  Similarity=0.036  Sum_probs=47.6

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      .+|...      ..+++.+++.+|+.+|++|+.+++....  ...+++++....                    ..+   
T Consensus         2 ~l~~~~------~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~--------------------~~v---   52 (73)
T cd03047           2 TIWGRR------SSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPN--------------------GRV---   52 (73)
T ss_pred             EEEecC------CCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCC--------------------CCC---
Confidence            578777      6789999999999999999988876422  223445543221                    134   


Q ss_pred             CEEEECCeEEechHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRI  217 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L  217 (289)
                      |.+..+|..|.....+.+.
T Consensus        53 P~L~~~~~~l~eS~aI~~Y   71 (73)
T cd03047          53 PVLEDGDFVLWESNAILRY   71 (73)
T ss_pred             CEEEECCEEEECHHHHHHH
Confidence            9998888887766665543

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.

>TIGR02187 GlrX_arch Glutaredoxin-like domain protein

Probab=95.31  E-value=0.048  Score=48.74  Aligned_cols=39  Identities=13%  Similarity=0.207  Sum_probs=30.5

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChh
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRG  161 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~  161 (289)
                      .-.|++|+++      +|++|..++.+|+.+     .|.+..+|+..+++
T Consensus       134 pv~I~~F~a~------~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~~~~~  177 (215)
T TIGR02187       134 PVRIEVFVTP------TCPYCPYAVLMAHKFALANDKILGEMIEANENPD  177 (215)
T ss_pred             CcEEEEEECC------CCCCcHHHHHHHHHHHHhcCceEEEEEeCCCCHH
Confidence            4467779999      999999999999864     46677788876543

This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.

>TIGR02187 GlrX_arch Glutaredoxin-like domain protein

Probab=94.93  E-value=0.23  Score=44.42  Aligned_cols=50  Identities=16%  Similarity=0.282  Sum_probs=33.9

Q ss_pred             CCCCcEEEEEe---cCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          115 DGENKVVIYTT---TLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       115 ~~~~kVVVYtt---SLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      .+...|++|++   +      +|+.|+.+..+|+..     ++.+..+|++.+.  -.++.+..+.
T Consensus        18 ~~~~~i~~f~~~~a~------wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~~~--~~~l~~~~~V   75 (215)
T TIGR02187        18 KNPVEIVVFTDNDKE------GCQYCKETEQLLEELSEVSPKLKLEIYDFDTPE--DKEEAEKYGV   75 (215)
T ss_pred             CCCeEEEEEcCCCCC------CCCchHHHHHHHHHHHhhCCCceEEEEecCCcc--cHHHHHHcCC
Confidence            44556889988   6      999999999998654     3556677777542  2344444443

This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.

>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit

Probab=94.92  E-value=0.026  Score=56.82  Aligned_cols=61  Identities=16%  Similarity=0.236  Sum_probs=42.9

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESS  190 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t  190 (289)
                      ++-.|.+|.+.      +|++|..|+++++.+     +|..+.+|....++    +.+..+..                 
T Consensus       117 ~~~~i~~f~~~------~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~~~~~~----~~~~~~v~-----------------  169 (515)
T TIGR03140       117 GPLHFETYVSL------TCQNCPDVVQALNQMALLNPNISHTMIDGALFQD----EVEALGIQ-----------------  169 (515)
T ss_pred             CCeEEEEEEeC------CCCCCHHHHHHHHHHHHhCCCceEEEEEchhCHH----HHHhcCCc-----------------
Confidence            45579999999      999999999998765     45566666664432    33332321                 


Q ss_pred             CCCCCCCCCEEEECCeEEe
Q 041824          191 VQPLPPVLPRVFVKGRYVG  209 (289)
Q Consensus       191 ~~~tv~~LPqIFI~G~~IG  209 (289)
                         .+   |++||||+.++
T Consensus       170 ---~V---P~~~i~~~~~~  182 (515)
T TIGR03140       170 ---GV---PAVFLNGEEFH  182 (515)
T ss_pred             ---cc---CEEEECCcEEE
Confidence               34   99999998664

This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.

>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional

Probab=94.58  E-value=0.036  Score=55.71  Aligned_cols=61  Identities=16%  Similarity=0.246  Sum_probs=43.7

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESS  190 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t  190 (289)
                      ++-.|.+|.+.      +|++|..|+++++..     .|.++.+|....++    +.+..+..                 
T Consensus       116 ~~~~i~~fv~~------~Cp~Cp~~v~~~~~~a~~~~~i~~~~id~~~~~~----~~~~~~v~-----------------  168 (517)
T PRK15317        116 GDFHFETYVSL------SCHNCPDVVQALNLMAVLNPNITHTMIDGALFQD----EVEARNIM-----------------  168 (517)
T ss_pred             CCeEEEEEEcC------CCCCcHHHHHHHHHHHHhCCCceEEEEEchhCHh----HHHhcCCc-----------------
Confidence            45569999999      999999999988764     56677777765443    33333321                 


Q ss_pred             CCCCCCCCCEEEECCeEEe
Q 041824          191 VQPLPPVLPRVFVKGRYVG  209 (289)
Q Consensus       191 ~~~tv~~LPqIFI~G~~IG  209 (289)
                         .+   |++||||+.+.
T Consensus       169 ---~V---P~~~i~~~~~~  181 (517)
T PRK15317        169 ---AV---PTVFLNGEEFG  181 (517)
T ss_pred             ---cc---CEEEECCcEEE
Confidence               34   99999997654

>PHA02278 thioredoxin-like protein

Probab=94.46  E-value=0.24  Score=39.94  Aligned_cols=50  Identities=20%  Similarity=0.292  Sum_probs=31.5

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCChhHHHHHHHHHc
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      .+.|+||..+     .+|+.|+.+..+|+..      .+++..+||+.++.-.+++.+..+
T Consensus        14 ~~~vvV~F~A-----~WCgpCk~m~p~l~~l~~~~~~~~~~~~vdvd~~~~d~~~l~~~~~   69 (103)
T PHA02278         14 KKDVIVMITQ-----DNCGKCEILKSVIPMFQESGDIKKPILTLNLDAEDVDREKAVKLFD   69 (103)
T ss_pred             CCcEEEEEEC-----CCCHHHHhHHHHHHHHHhhhcCCceEEEEECCccccccHHHHHHCC
Confidence            4445555444     3999999988877543      356888899865322344555544

>PRK15113 glutathione S-transferase; Provisional

Probab=93.85  E-value=0.35  Score=42.63  Aligned_cols=73  Identities=8%  Similarity=0.126  Sum_probs=50.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      .+++|...-.    .+++|.+|+-+|..+||+|+.+.|+...  ...+++.++.-.                    ..+ 
T Consensus         5 ~~~Ly~~~~~----~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~--------------------g~V-   59 (214)
T PRK15113          5 AITLYSDAHF----FSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLT--------------------RRV-   59 (214)
T ss_pred             eEEEEeCCCC----CCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCC--------------------CCC-
Confidence            4789986411    5799999999999999999988887532  123455554221                    134 


Q ss_pred             CCCEEEECCeEEechHHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~  218 (289)
                        |.+.+||..|--...+.++.
T Consensus        60 --P~L~~~~~~l~ES~aI~~YL   79 (214)
T PRK15113         60 --PTLQHDDFELSESSAIAEYL   79 (214)
T ss_pred             --CEEEECCEEEecHHHHHHHH
Confidence              99999998776666666543

>PTZ00051 thioredoxin; Provisional

Probab=93.79  E-value=0.33  Score=36.92  Aligned_cols=35  Identities=17%  Similarity=0.175  Sum_probs=26.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh-----CCCcEEEEEcCCCh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN-----FGVAVSERDVSMDR  160 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~-----~gV~y~ErDVs~d~  160 (289)
                      |+.|+.+      +|+.|+++...|+.     .++.|-.+|++...
T Consensus        22 li~f~~~------~C~~C~~~~~~l~~l~~~~~~~~~~~vd~~~~~   61 (98)
T PTZ00051         22 IVDFYAE------WCGPCKRIAPFYEECSKEYTKMVFVKVDVDELS   61 (98)
T ss_pred             EEEEECC------CCHHHHHHhHHHHHHHHHcCCcEEEEEECcchH
Confidence            4556666      99999999888876     36788888887543

>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit

Probab=93.62  E-value=0.23  Score=50.59  Aligned_cols=59  Identities=15%  Similarity=0.109  Sum_probs=42.8

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHH----hC-CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIE----NF-GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESS  190 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~----~~-gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t  190 (289)
                      ++-.|.||.++      +|++|.++.+.++    .. +|.++.+|+...+    |+.+..+-                  
T Consensus       476 ~~~~i~v~~~~------~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~~~~----~~~~~~~v------------------  527 (555)
T TIGR03143       476 KPVNIKIGVSL------SCTLCPDVVLAAQRIASLNPNVEAEMIDVSHFP----DLKDEYGI------------------  527 (555)
T ss_pred             CCeEEEEEECC------CCCCcHHHHHHHHHHHHhCCCceEEEEECcccH----HHHHhCCc------------------
Confidence            44568899999      9999988877654    44 7999999998654    34433332                  


Q ss_pred             CCCCCCCCCEEEECCeE
Q 041824          191 VQPLPPVLPRVFVKGRY  207 (289)
Q Consensus       191 ~~~tv~~LPqIFI~G~~  207 (289)
                           ..+|.+||||+.
T Consensus       528 -----~~vP~~~i~~~~  539 (555)
T TIGR03143       528 -----MSVPAIVVDDQQ  539 (555)
T ss_pred             -----eecCEEEECCEE
Confidence                 233999999963

This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).

>TIGR01262 maiA maleylacetoacetate isomerase

Probab=93.60  E-value=0.16  Score=43.94  Aligned_cols=69  Identities=12%  Similarity=0.173  Sum_probs=48.8

Q ss_pred             EEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCC-C--hhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          122 IYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSM-D--RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       122 VYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~-d--~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      ||+..      .++++.+|+.+|..+||+|+.+.++. .  ....+++.++...                       ..+
T Consensus         2 Ly~~~------~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~-----------------------g~v   52 (210)
T TIGR01262         2 LYSYW------RSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQ-----------------------GLV   52 (210)
T ss_pred             cccCC------CCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCC-----------------------CcC
Confidence            56666      77999999999999999999988874 1  1122344443211                       234


Q ss_pred             CEEEECCeEEechHHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E  219 (289)
                      |.+.+||..|-....+.+..+
T Consensus        53 P~L~~~g~~l~ES~aI~~yl~   73 (210)
T TIGR01262        53 PTLDIDGEVLTQSLAIIEYLE   73 (210)
T ss_pred             CEEEECCEEeecHHHHHHHHH
Confidence            999999988888777776543

Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.

>PLN02473 glutathione S-transferase

Probab=93.29  E-value=0.35  Score=42.18  Aligned_cols=71  Identities=13%  Similarity=-0.010  Sum_probs=50.2

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC--hhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD--RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d--~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.+|...      ..+++.+|+-+|..+||+|+.+.|+..  .....++.++...                    ..+  
T Consensus         3 ~kLy~~~------~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~--------------------g~v--   54 (214)
T PLN02473          3 VKVYGQI------KAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPF--------------------GQV--   54 (214)
T ss_pred             eEEecCC------CCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCC--------------------CCC--
Confidence            5688877      789999999999999999998766532  1223344433211                    134  


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                       |.+..+|..|.....+.+..+
T Consensus        55 -P~L~~~g~~l~ES~aI~~YL~   75 (214)
T PLN02473         55 -PAIEDGDLKLFESRAIARYYA   75 (214)
T ss_pred             -CeEEECCEEEEehHHHHHHHH
Confidence             999999998888877777543

>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms

Probab=93.24  E-value=1.1  Score=33.71  Aligned_cols=28  Identities=25%  Similarity=0.495  Sum_probs=22.2

Q ss_pred             CCHHHHHHHHHHHh----C--CCcEEEEEcCCCh
Q 041824          133 TYEACKAAKSVIEN----F--GVAVSERDVSMDR  160 (289)
Q Consensus       133 tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~  160 (289)
                      +|+.|+.++..|..    +  +|.|-.+|++.++
T Consensus        28 ~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~   61 (103)
T PF00085_consen   28 WCPPCKAFKPILEKLAKEYKDNVKFAKVDCDENK   61 (103)
T ss_dssp             TSHHHHHHHHHHHHHHHHTTTTSEEEEEETTTSH
T ss_pred             CCCccccccceecccccccccccccchhhhhccc
Confidence            99999999987753    3  5888899998663

Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....

>PLN02817 glutathione dehydrogenase (ascorbate)

Probab=93.05  E-value=0.34  Score=45.26  Aligned_cols=63  Identities=13%  Similarity=0.165  Sum_probs=45.5

Q ss_pred             CCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEEEECCeEEechH
Q 041824          133 TYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAE  212 (289)
Q Consensus       133 tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI~G~~IGG~d  212 (289)
                      .|++|.+|+-+|+.+||+|+.+.|+... .-+++.++.-.                    ..+   |.+..+|..|....
T Consensus        72 ~cp~s~rV~i~L~ekgi~ye~~~vdl~~-~~~~fl~iNP~--------------------GkV---PvL~~d~~~L~ES~  127 (265)
T PLN02817         72 DCPFCQRVLLTLEEKHLPYDMKLVDLTN-KPEWFLKISPE--------------------GKV---PVVKLDEKWVADSD  127 (265)
T ss_pred             CCcHHHHHHHHHHHcCCCCEEEEeCcCc-CCHHHHhhCCC--------------------CCC---CEEEECCEEEecHH
Confidence            7999999999999999999988776532 12334443211                    134   99999998887777


Q ss_pred             HHHHHHH
Q 041824          213 EVLRIVE  219 (289)
Q Consensus       213 el~~L~E  219 (289)
                      .+.+..+
T Consensus       128 aI~~YL~  134 (265)
T PLN02817        128 VITQALE  134 (265)
T ss_pred             HHHHHHH
Confidence            7766554

>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif

Probab=93.03  E-value=0.49  Score=38.33  Aligned_cols=39  Identities=13%  Similarity=0.096  Sum_probs=28.1

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh-----CCCcEEEEEcCCChh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN-----FGVAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~-----~gV~y~ErDVs~d~~  161 (289)
                      ..|+||..+     .+|+.|+.+...|+.     .++.|..+|++..++
T Consensus        23 ~~vvV~f~a-----~~c~~C~~~~p~l~~la~~~~~i~f~~Vd~~~~~~   66 (113)
T cd02989          23 ERVVCHFYH-----PEFFRCKIMDKHLEILAKKHLETKFIKVNAEKAPF   66 (113)
T ss_pred             CcEEEEEEC-----CCCccHHHHHHHHHHHHHHcCCCEEEEEEcccCHH
Confidence            345555443     299999999888865     268899999987653

The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.

>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=93.02  E-value=0.82  Score=34.48  Aligned_cols=71  Identities=13%  Similarity=0.153  Sum_probs=46.3

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      +++|...      ..+.|.+++.+|+..|++|+.+.++..+++. +++.- ...                    ....+|
T Consensus         2 ~~Ly~~~------~~~~~~~v~~~l~~~gi~~e~~~v~~~~~~~-~~~~~-~~~--------------------~~g~vP   53 (79)
T cd03077           2 PVLHYFN------GRGRMESIRWLLAAAGVEFEEKFIESAEDLE-KLKKD-GSL--------------------MFQQVP   53 (79)
T ss_pred             CEEEEeC------CCChHHHHHHHHHHcCCCcEEEEeccHHHHH-hhccc-cCC--------------------CCCCCC
Confidence            5688887      5578889999999999999988876532221 11110 000                    012349


Q ss_pred             EEEECCeEEechHHHHHHH
Q 041824          200 RVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       200 qIFI~G~~IGG~del~~L~  218 (289)
                      .+.+||..|.....+....
T Consensus        54 ~L~~~g~~l~ES~AI~~YL   72 (79)
T cd03077          54 MVEIDGMKLVQTRAILNYI   72 (79)
T ss_pred             EEEECCEEEeeHHHHHHHH
Confidence            9999998887766665543

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the

>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions

Probab=92.94  E-value=0.32  Score=38.86  Aligned_cols=33  Identities=18%  Similarity=0.348  Sum_probs=24.7

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh----C-CCcEEEEEcCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN----F-GVAVSERDVSM  158 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~----~-gV~y~ErDVs~  158 (289)
                      ||.|+++      +|+.|+.+...|+.    + ++.|-.+|++.
T Consensus        28 vv~F~a~------~c~~C~~l~~~l~~la~~~~~v~f~~vd~~~   65 (113)
T cd02957          28 VVHFYEP------GFPRCKILDSHLEELAAKYPETKFVKINAEK   65 (113)
T ss_pred             EEEEeCC------CCCcHHHHHHHHHHHHHHCCCcEEEEEEchh
Confidence            4456666      99999999888864    2 57788888864

Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te

>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]

Probab=92.64  E-value=0.79  Score=42.82  Aligned_cols=75  Identities=12%  Similarity=0.131  Sum_probs=54.3

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHH-HHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEEL-RELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL-~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      +.|.||+.-      .||+.+||+-.|+.+||+|+.++++-..  +-++ .+..--                   ...+ 
T Consensus         8 ~~vrL~~~w------~sPfa~R~~iaL~~KgI~yE~veedl~~--Ks~~ll~~np~-------------------hkKV-   59 (231)
T KOG0406|consen    8 GTVKLLGMW------FSPFAQRVRIALKLKGIPYEYVEEDLTN--KSEWLLEKNPV-------------------HKKV-   59 (231)
T ss_pred             CeEEEEEee------cChHHHHHHHHHHhcCCceEEEecCCCC--CCHHHHHhccc-------------------cccC-
Confidence            679999998      9999999999999999999988877532  2233 322111                   1134 


Q ss_pred             CCCEEEECCeEEechHHHHHHHHhCc
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVEEGW  222 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E~G~  222 (289)
                        |.+..||+.|.-.-.+.++.++-.
T Consensus        60 --PvL~Hn~k~i~ESliiveYiDe~w   83 (231)
T KOG0406|consen   60 --PVLEHNGKPICESLIIVEYIDETW   83 (231)
T ss_pred             --CEEEECCceehhhHHHHHHHHhhc
Confidence              999999999876666666555433

>cd02985 TRX_CDSP32 TRX family, chloroplastic drought-induced stress protein of 32 kD (CDSP32); CDSP32 is composed of two TRX domains, a C-terminal TRX domain which contains a redox active CXXC motif and an N-terminal TRX-like domain which contains an SXXS sequence instead of the redox active motif

Probab=92.61  E-value=0.88  Score=35.81  Aligned_cols=36  Identities=6%  Similarity=-0.020  Sum_probs=26.2

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCCh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~  160 (289)
                      -||-|+.+      +|+.|+.....|+..     ++.|-.+|++.+.
T Consensus        18 vvv~F~a~------wC~~C~~~~p~l~~la~~~~~v~~~~vd~d~~~   58 (103)
T cd02985          18 VVLEFALK------HSGPSVKIYPTMVKLSRTCNDVVFLLVNGDEND   58 (103)
T ss_pred             EEEEEECC------CCHhHHHHhHHHHHHHHHCCCCEEEEEECCCCh
Confidence            35555556      999999888888652     5778888887654

CDSP32 is a stress-inducible TRX, i.e., it acts as a TRX by reducing protein disulfides and is induced by environmental and oxidative stress conditions. It plays a critical role in plastid defense against oxidative damage, a role related to its function as a physiological electron donor to BAS1, a plastidic 2-cys peroxiredoxin. Plants lacking CDSP32 exhibit decreased photosystem II photochemical efficiencies and chlorophyll retention compared to WT controls, as well as an increased proportion of BAS1 in its overoxidized monomeric form.

>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation

Probab=92.57  E-value=0.62  Score=37.46  Aligned_cols=35  Identities=11%  Similarity=0.127  Sum_probs=22.6

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHH-------h--CCCcEEEEEcCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIE-------N--FGVAVSERDVSMD  159 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~-------~--~gV~y~ErDVs~d  159 (289)
                      -+|.|+++      +|++|++....+.       .  .++.+..+|++.+
T Consensus        17 vlv~f~a~------wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~   60 (125)
T cd02951          17 LLLLFSQP------GCPYCDKLKRDYLNDPAVQAYIRAHFVVVYINIDGD   60 (125)
T ss_pred             EEEEEeCC------CCHHHHHHHHHhcCcHHHHHHHHhheEEEEEEccCC
Confidence            35566666      9999998875441       1  2455667777654

Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.

>TIGR01126 pdi_dom protein disulfide-isomerase domain

Probab=92.54  E-value=0.69  Score=34.83  Aligned_cols=39  Identities=13%  Similarity=0.256  Sum_probs=26.9

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHh-------C-CCcEEEEEcCCCh
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIEN-------F-GVAVSERDVSMDR  160 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~-------~-gV~y~ErDVs~d~  160 (289)
                      +..-||+|+++      +|+.|+.....|+.       . ++.+..+|.+.+.
T Consensus        13 ~~~~~i~f~~~------~C~~c~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   59 (102)
T TIGR01126        13 NKDVLVEFYAP------WCGHCKNLAPEYEKLAKELKGDPDIVLAKVDATAEK   59 (102)
T ss_pred             CCcEEEEEECC------CCHHHHhhChHHHHHHHHhccCCceEEEEEEccchH
Confidence            34457788888      99999987666643       1 2667777776553

This model describes a domain of eukaryotic protein disulfide isomerases, generally found in two copies. The high cutoff for total score reflects the expectation of finding both copies. The domain is similar to thioredoxin but the redox-active disulfide region motif is APWCGHCK.

>cd02954 DIM1 Dim1 family; Dim1 is also referred to as U5 small nuclear ribonucleoprotein particle (snRNP)-specific 15kD protein

Probab=92.51  E-value=0.55  Score=39.13  Aligned_cols=43  Identities=9%  Similarity=0.162  Sum_probs=29.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC-----C-CcEEEEEcCCChhHHHHHHHHHcc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF-----G-VAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~-----g-V~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      ||-|+.+      +|+.|+.+..+|+..     + +.|-.+|++.+++    +.+..+.
T Consensus        18 VV~F~A~------WCgpCk~m~P~le~la~~~~~~v~f~kVDvD~~~~----la~~~~V   66 (114)
T cd02954          18 VIRFGRD------WDPVCMQMDEVLAKIAEDVSNFAVIYLVDIDEVPD----FNKMYEL   66 (114)
T ss_pred             EEEEECC------CChhHHHHHHHHHHHHHHccCceEEEEEECCCCHH----HHHHcCC
Confidence            4446666      999999998888543     2 5688999987753    4444443

It is a component of U5 snRNP, which pre-assembles with U4/U6 snRNPs to form a [U4/U6:U5] tri-snRNP complex required for pre-mRNA splicing. Dim1 interacts with multiple splicing-associated proteins, suggesting that it functions at multiple control points in the splicing of pre-mRNA as part of a large spliceosomal complex involving many protein-protein interactions. U5 snRNP contains seven core proteins (common to all snRNPs) and nine U5-specific proteins, one of which is Dim1. Dim1 adopts a thioredoxin fold but does not contain the redox active CXXC motif. It is essential for G2/M phase transition, as a consequence to its role in pre-mRNA splicing.

>TIGR01068 thioredoxin thioredoxin

Probab=92.41  E-value=1.3  Score=33.07  Aligned_cols=36  Identities=17%  Similarity=0.311  Sum_probs=25.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      |+.|.++      +|+.|+.+...|+.    +  .+.|-.+|++.+.+
T Consensus        18 vi~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~   59 (101)
T TIGR01068        18 LVDFWAP------WCGPCKMIAPILEELAKEYEGKVKFVKLNVDENPD   59 (101)
T ss_pred             EEEEECC------CCHHHHHhCHHHHHHHHHhcCCeEEEEEECCCCHH
Confidence            4445555      99999998777754    2  37788888886643

Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model.

>PLN02378 glutathione S-transferase DHAR1

Probab=92.40  E-value=0.57  Score=41.49  Aligned_cols=64  Identities=9%  Similarity=0.142  Sum_probs=45.2

Q ss_pred             CCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEEEECCeEEech
Q 041824          132 KTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGA  211 (289)
Q Consensus       132 ~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI~G~~IGG~  211 (289)
                      ..|++|++|+-+|+.+|++|+.+.|+.... -+++.++...                    ..+   |.+-.+|..|.-.
T Consensus        18 ~~~p~~~rv~~~L~e~gl~~e~~~v~~~~~-~~~~l~inP~--------------------G~V---PvL~~~~~~l~ES   73 (213)
T PLN02378         18 GDCPFSQRALLTLEEKSLTYKIHLINLSDK-PQWFLDISPQ--------------------GKV---PVLKIDDKWVTDS   73 (213)
T ss_pred             CCCcchHHHHHHHHHcCCCCeEEEeCcccC-CHHHHHhCCC--------------------CCC---CEEEECCEEecCH
Confidence            579999999999999999999877765321 2234443221                    145   9998899888776


Q ss_pred             HHHHHHHH
Q 041824          212 EEVLRIVE  219 (289)
Q Consensus       212 del~~L~E  219 (289)
                      ..+.+..+
T Consensus        74 ~aI~~YL~   81 (213)
T PLN02378         74 DVIVGILE   81 (213)
T ss_pred             HHHHHHHH
Confidence            66666544

>cd02994 PDI_a_TMX PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX

Probab=92.33  E-value=1.1  Score=34.43  Aligned_cols=37  Identities=22%  Similarity=0.422  Sum_probs=27.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh-------CCCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN-------FGVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~-------~gV~y~ErDVs~d~~  161 (289)
                      -+|.|.++      +|+.|+++...|+.       .+|.+-.+|++.++.
T Consensus        19 ~lv~f~a~------wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~   62 (101)
T cd02994          19 WMIEFYAP------WCPACQQLQPEWEEFADWSDDLGINVAKVDVTQEPG   62 (101)
T ss_pred             EEEEEECC------CCHHHHHHhHHHHHHHHhhccCCeEEEEEEccCCHh
Confidence            47777777      99999998877753       246677888876543

TMX is a type I integral membrane protein; the N-terminal redox active TRX domain is present in the endoplasmic reticulum (ER) lumen while the C-terminus is oriented towards the cytoplasm. It is expressed in many cell types and its active site motif (CPAC) is unique. In vitro, TMX reduces interchain disulfides of insulin and renatures inactive RNase containing incorrect disulfide bonds. The C. elegans homolog, DPY-11, is expressed only in the hypodermis and resides in the cytoplasm. It is required for body and sensory organ morphogeneis. Another uncharacterized TRX-related transmembrane protein, human TMX4, is included in the alignment. The active site sequence of TMX4 is CPSC.

>PRK10877 protein disulfide isomerase II DsbC; Provisional

Probab=92.16  E-value=0.83  Score=41.90  Aligned_cols=37  Identities=16%  Similarity=0.450  Sum_probs=28.0

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhC---CCcEEEEEc
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVIENF---GVAVSERDV  156 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~---gV~y~ErDV  156 (289)
                      +.+...|++|+=.      .|+||+++...|+.+   +|.+..+.+
T Consensus       105 ~~~k~~I~vFtDp------~CpyCkkl~~~l~~~~~~~v~v~~~~~  144 (232)
T PRK10877        105 PQEKHVITVFTDI------TCGYCHKLHEQMKDYNALGITVRYLAF  144 (232)
T ss_pred             CCCCEEEEEEECC------CChHHHHHHHHHHHHhcCCeEEEEEec
Confidence            4556678899988      999999998888875   466655433

>PRK09381 trxA thioredoxin; Provisional

Probab=91.84  E-value=0.72  Score=36.00  Aligned_cols=38  Identities=13%  Similarity=0.369  Sum_probs=26.6

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      .-||.|+++      +|+.|+.+...|+.    +  ++.+-.+|++.++.
T Consensus        23 ~vvv~f~~~------~C~~C~~~~p~~~~l~~~~~~~~~~~~vd~~~~~~   66 (109)
T PRK09381         23 AILVDFWAE------WCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG   66 (109)
T ss_pred             eEEEEEECC------CCHHHHHHhHHHHHHHHHhCCCcEEEEEECCCChh
Confidence            345566666      99999999877753    3  36677888876543

>COG3019 Predicted metal-binding protein [General function prediction only]

Probab=90.97  E-value=1.6  Score=38.30  Aligned_cols=78  Identities=18%  Similarity=0.242  Sum_probs=58.4

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      ...++++|..+      +|.=|+.--+.|+..|+.+..++...    .+.+++++|..-          ..+      .-
T Consensus        24 ~~~~~~vyksP------nCGCC~~w~~~mk~~Gf~Vk~~~~~d----~~alK~~~gIp~----------e~~------SC   77 (149)
T COG3019          24 QATEMVVYKSP------NCGCCDEWAQHMKANGFEVKVVETDD----FLALKRRLGIPY----------EMQ------SC   77 (149)
T ss_pred             ceeeEEEEeCC------CCccHHHHHHHHHhCCcEEEEeecCc----HHHHHHhcCCCh----------hhc------cc
Confidence            34579999999      99999999999999999988877753    456777777541          111      12


Q ss_pred             CCCCEEEECCeEEech---HHHHHHHHhCc
Q 041824          196 PVLPRVFVKGRYVGGA---EEVLRIVEEGW  222 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~---del~~L~E~G~  222 (289)
                         =...|||.||=|.   +++.+|.+++.
T Consensus        78 ---HT~VI~Gy~vEGHVPa~aI~~ll~~~p  104 (149)
T COG3019          78 ---HTAVINGYYVEGHVPAEAIARLLAEKP  104 (149)
T ss_pred             ---cEEEEcCEEEeccCCHHHHHHHHhCCC
Confidence               4678999999885   77777766655

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=90.40  E-value=0.18  Score=50.04  Aligned_cols=54  Identities=26%  Similarity=0.526  Sum_probs=40.6

Q ss_pred             CCcccCCCCc------eeEeCCCCCCcceeeeccCCCCccccccCCccCcCCcc---cCCCCC
Q 041824          236 KGVCQGCADV------RFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLV---LCPLCS  289 (289)
Q Consensus       236 ~~~C~~Cgg~------rfvpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLv---rCp~C~  289 (289)
                      ...|..|.|.      .-..|..|+|+-.+....+..-......|+.||-.|-+   .|+.|.
T Consensus       142 ~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~~pC~~C~  204 (371)
T COG0484         142 SVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCK  204 (371)
T ss_pred             eeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECCCCCCCCC
Confidence            4689999988      67899999999876655422112346899999999987   599883

>PF06953 ArsD: Arsenical resistance operon trans-acting repressor ArsD; InterPro: IPR010712 This family consists of several bacterial arsenical resistance operon trans-acting repressor ArsD proteins

Probab=90.36  E-value=0.66  Score=39.32  Aligned_cols=81  Identities=17%  Similarity=0.214  Sum_probs=42.8

Q ss_pred             CCcEEEEEecCCCCCCCCHH--------HHHHHHHHHhCCCcEEEEEcCCChhHH---HHHHHHHcccccccCCCCCcch
Q 041824          117 ENKVVIYTTTLRGIRKTYEA--------CKAAKSVIENFGVAVSERDVSMDRGFK---EELRELMMRRRRRSSSSNNNEE  185 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~--------C~~ak~iL~~~gV~y~ErDVs~d~~~r---eEL~~llg~~~~~~~~s~~~~~  185 (289)
                      |++|.||--.|==..-.|..        =..+...|+..||.+.-.+++.++...   +.+.+++...            
T Consensus         1 M~~i~ifepamCC~tGvCG~~vd~eL~~~a~~~~~Lk~~gv~v~RyNL~~~P~aF~~n~~V~~~L~~~------------   68 (123)
T PF06953_consen    1 MKKIEIFEPAMCCSTGVCGPSVDPELVRFAADLDWLKEQGVEVERYNLAQNPQAFVENPEVNQLLQTE------------   68 (123)
T ss_dssp             --EEEEEE-S-SSTTS-SSSS--HHHHHHHHHHHHHHHTT-EEEEEETTT-TTHHHHSHHHHHHHHHH------------
T ss_pred             CCceEEeccccccccCccCCCCCHHHHHHHHHHHHHHhCCceEEEEccccCHHHHHhCHHHHHHHHHc------------
Confidence            35666776664211112221        235567789999999999999887542   2344444332            


Q ss_pred             hhccCCCCCCCCCCEEEECCeEE--echHHHHHH
Q 041824          186 EAESSVQPLPPVLPRVFVKGRYV--GGAEEVLRI  217 (289)
Q Consensus       186 ~g~~t~~~tv~~LPqIFI~G~~I--GG~del~~L  217 (289)
                              ....||.++|||+.+  |.|=...+|
T Consensus        69 --------G~e~LPitlVdGeiv~~G~YPt~eEl   94 (123)
T PF06953_consen   69 --------GAEALPITLVDGEIVKTGRYPTNEEL   94 (123)
T ss_dssp             ---------GGG-SEEEETTEEEEESS---HHHH
T ss_pred             --------CcccCCEEEECCEEEEecCCCCHHHH
Confidence                    124579999999865  666554443

ArsD is a trans-acting repressor of the arsRDABC operon that confers resistance to arsenicals and antimonials in Escherichia coli. It possesses two-pairs of vicinal cysteine residues, Cys(12)-Cys(13) and Cys(112)-Cys(113), that potentially form separate binding sites for the metalloids that trigger dissociation of ArsD from the operon. However, as a homodimer it has four vicinal cysteine pairs [].; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent, 0046685 response to arsenic-containing substance; PDB: 3MWH_A 3KGK_A 3KTB_B.

>cd02948 TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fusion protein family; most members of this group are fusion proteins which contain one redox active TRX domain containing a CXXC motif and three NDPK domains, and are characterized as intermediate chains (ICs) of axonemal outer arm dynein

Probab=90.26  E-value=2  Score=33.66  Aligned_cols=33  Identities=21%  Similarity=0.319  Sum_probs=23.1

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----CC---CcEEEEEcC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----FG---VAVSERDVS  157 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~g---V~y~ErDVs  157 (289)
                      -||.|+++      +|+.|+.+...|+.    ++   +.|..+|++
T Consensus        20 vvv~F~a~------wC~~Ck~~~p~l~~~~~~~~~~~~~~~~vd~d   59 (102)
T cd02948          20 TVVDVYQE------WCGPCKAVVSLFKKIKNELGDDLLHFATAEAD   59 (102)
T ss_pred             EEEEEECC------cCHhHHHHhHHHHHHHHHcCCCcEEEEEEeCC
Confidence            35566666      99999988877754    32   456677776

Dyneins are molecular motors that generate force against microtubules to produce cellular movement, and are divided into two classes: axonemal and cytoplasmic. They are supramolecular complexes consisting of three protein groups classified according to size: dynein heavy, intermediate and light chains. Axonemal dyneins form two structures, the inner and outer arms, which are attached to doublet microtubules throughout the cilia and flagella. The human homolog is the sperm-specific Sptrx-2, presumed to be a component of the human sperm axoneme architecture. Included in this group is another human protein, TRX-like protein 2, a smaller fusion protein containing one TRX and one NDPK domain, which

>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes

Probab=90.20  E-value=1.9  Score=32.53  Aligned_cols=36  Identities=19%  Similarity=0.148  Sum_probs=25.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh------CCCcEEEEEcCCCh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN------FGVAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~------~gV~y~ErDVs~d~  160 (289)
                      -||.|..+      +|..|+++...|+.      ..+.+-.+|++..+
T Consensus        17 v~v~f~~~------~C~~C~~~~~~l~~l~~~~~~~i~~~~vd~~~~~   58 (97)
T cd02984          17 LVLHFWAP------WAEPCKQMNQVFEELAKEAFPSVLFLSIEAEELP   58 (97)
T ss_pred             EEEEEECC------CCHHHHHHhHHHHHHHHHhCCceEEEEEccccCH
Confidence            35566666      99999999888875      25666677776443

PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=90.06  E-value=0.44  Score=35.54  Aligned_cols=44  Identities=27%  Similarity=0.612  Sum_probs=25.1

Q ss_pred             ceeEeCCCCCCcceeeeccCC--CCccccccCCccCcCCccc----CCCC
Q 041824          245 VRFFPCFRCNGSCKLVINMQP--RGKTAALRCPDCNENGLVL----CPLC  288 (289)
Q Consensus       245 ~rfvpC~~C~GS~K~~~~~~~--~g~~~~~rC~~CNENGLvr----Cp~C  288 (289)
                      .....|..|+|+-.++.....  ........|+.|+=.|.+.    |+.|
T Consensus        13 ~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C   62 (66)
T PF00684_consen   13 KKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTC   62 (66)
T ss_dssp             TT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSS
T ss_pred             CCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCC
Confidence            445788888888766554321  1112357888888888775    7766

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain

Probab=90.05  E-value=1.8  Score=32.75  Aligned_cols=35  Identities=11%  Similarity=0.195  Sum_probs=24.1

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCCh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDR  160 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~  160 (289)
                      ||.|.++      +|+.|+++...|..    +  .+.+-.+|++.+.
T Consensus        16 lv~f~a~------wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~   56 (96)
T cd02956          16 VVDFWAP------RSPPSKELLPLLERLAEEYQGQFVLAKVNCDAQP   56 (96)
T ss_pred             EEEEECC------CChHHHHHHHHHHHHHHHhCCcEEEEEEeccCCH
Confidence            5555566      99999999877764    2  3455677777654

Its gene has been sequenced from several gammaproteobacteria and actinobacteria.

>KOG0910 consensus Thioredoxin-like protein [Posttranslational modification, protein turnover, chaperones]

Probab=89.93  E-value=0.39  Score=42.19  Aligned_cols=50  Identities=12%  Similarity=0.193  Sum_probs=35.6

Q ss_pred             HhhhcCCCCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCChhH
Q 041824          107 RFERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDRGF  162 (289)
Q Consensus       107 ~f~~~~pp~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~~~  162 (289)
                      .|+.+-...+..=||-|+..      +|..|+.+.-+|+.+      .+++..+|++.+.+.
T Consensus        52 ~~~~~Vi~S~~PVlVdF~A~------WCgPCk~l~P~l~~~~~~~~g~~k~~kvdtD~~~el  107 (150)
T KOG0910|consen   52 EFDDKVINSDVPVLVDFHAE------WCGPCKMLGPILEELVSEYAGKFKLYKVDTDEHPEL  107 (150)
T ss_pred             HHHHHHHccCCCEEEEEecC------cCccHhHhhHHHHHHHHhhcCeEEEEEEccccccch
Confidence            34444333344457888888      999999999999764      466788999887653

>PF11009 DUF2847: Protein of unknown function (DUF2847); InterPro: IPR022551 Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol

Probab=89.62  E-value=3.1  Score=34.43  Aligned_cols=66  Identities=23%  Similarity=0.268  Sum_probs=46.0

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESS  190 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t  190 (289)
                      ...|+||-=|     -+|+=+..|..-|+.+      .+++..+||-.++..-.++.+.+|-.                 
T Consensus        19 ~~~~~iFKHS-----t~C~IS~~a~~~~e~~~~~~~~~~~~y~l~v~~~R~vSn~IAe~~~V~-----------------   76 (105)
T PF11009_consen   19 EKPVLIFKHS-----TRCPISAMALREFEKFWEESPDEIPVYYLDVIEYRPVSNAIAEDFGVK-----------------   76 (105)
T ss_dssp             -SEEEEEEE------TT-HHHHHHHHHHHHHHHHHT----EEEEEGGGGHHHHHHHHHHHT-------------------
T ss_pred             cCcEEEEEeC-----CCChhhHHHHHHHHHHhhcCCccceEEEEEEEeCchhHHHHHHHhCCC-----------------
Confidence            4568888877     1499999988877653      29999999999999999999999864                 


Q ss_pred             CCCCCCCCCEEEE--CCeEEe
Q 041824          191 VQPLPPVLPRVFV--KGRYVG  209 (289)
Q Consensus       191 ~~~tv~~LPqIFI--~G~~IG  209 (289)
                        .-.   |||++  ||+.|=
T Consensus        77 --HeS---PQ~ili~~g~~v~   92 (105)
T PF11009_consen   77 --HES---PQVILIKNGKVVW   92 (105)
T ss_dssp             ----S---SEEEEEETTEEEE
T ss_pred             --cCC---CcEEEEECCEEEE
Confidence              123   99886  887663

The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018 from TIGRFAMS), is described as thioredoxin reductase-like. ; PDB: 3IV4_A.

>PF13098 Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_A 2L57_A 1EEJ_B 1TJD_A 1JZD_B 1JZO_A 1G0T_B 3GV1_A 1V58_A 2H0H_A

Probab=89.42  E-value=1.8  Score=33.63  Aligned_cols=24  Identities=25%  Similarity=0.378  Sum_probs=15.8

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHH
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIE  145 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~  145 (289)
                      +...|++|+..      +|++|+++...+.
T Consensus         5 ~k~~v~~F~~~------~C~~C~~~~~~~~   28 (112)
T PF13098_consen    5 GKPIVVVFTDP------WCPYCKKLEKELF   28 (112)
T ss_dssp             SSEEEEEEE-T------T-HHHHHHHHHHH
T ss_pred             CCEEEEEEECC------CCHHHHHHHHHHH
Confidence            34456667677      9999998866665

...

>PRK10357 putative glutathione S-transferase; Provisional

Probab=89.24  E-value=1.2  Score=38.40  Aligned_cols=32  Identities=6%  Similarity=-0.035  Sum_probs=28.6

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSM  158 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~  158 (289)
                      .+|+..      .++++++|+-+|+.+||+|+.++++.
T Consensus         2 ~Ly~~~------~s~~~~~v~~~L~~~gv~ye~~~~~~   33 (202)
T PRK10357          2 KLIGSY------TSPFVRKISILLLEKGITFEFVNELP   33 (202)
T ss_pred             eeecCC------CCchHHHHHHHHHHcCCCCeEEecCC
Confidence            578887      88999999999999999999988875

>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait

Probab=88.91  E-value=1.2  Score=34.39  Aligned_cols=55  Identities=15%  Similarity=0.163  Sum_probs=40.0

Q ss_pred             HHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEEEECCeEEechHHH
Q 041824          135 EACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEV  214 (289)
Q Consensus       135 ~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI~G~~IGG~del  214 (289)
                      +.|.++..+|+..|++|+.+++...           ...         ++       ...+   |.|-+||+.|+...-+
T Consensus        18 ~~~~kv~~~L~elglpye~~~~~~~-----------~~~---------~P-------~GkV---P~L~~dg~vI~eS~aI   67 (74)
T cd03079          18 ASCLAVQTFLKMCNLPFNVRCRANA-----------EFM---------SP-------SGKV---PFIRVGNQIVSEFGPI   67 (74)
T ss_pred             CCHHHHHHHHHHcCCCcEEEecCCc-----------ccc---------CC-------CCcc---cEEEECCEEEeCHHHH
Confidence            7899999999999999998865321           000         00       0134   9999999999998887


Q ss_pred             HHHHH
Q 041824          215 LRIVE  219 (289)
Q Consensus       215 ~~L~E  219 (289)
                      ..+.+
T Consensus        68 l~yL~   72 (74)
T cd03079          68 VQFVE   72 (74)
T ss_pred             HHHHh
Confidence            76543

Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.

>cd03020 DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold

Probab=88.90  E-value=2.3  Score=37.21  Aligned_cols=38  Identities=21%  Similarity=0.344  Sum_probs=29.2

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHHH--hCCCcEEEEEcC
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVIE--NFGVAVSERDVS  157 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~--~~gV~y~ErDVs  157 (289)
                      +.++..|++|+-.      .|++|+++...|+  ..+|.+..+-+.
T Consensus        75 ~~~~~~i~~f~D~------~Cp~C~~~~~~l~~~~~~v~v~~~~~p  114 (197)
T cd03020          75 GNGKRVVYVFTDP------DCPYCRKLEKELKPNADGVTVRIFPVP  114 (197)
T ss_pred             CCCCEEEEEEECC------CCccHHHHHHHHhhccCceEEEEEEcC
Confidence            3456678888888      9999999999997  456777666553

They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins. DsbC and DsbG are kept in their reduced state by the cytoplasmic membrane protein DsbD, which utilizes the TRX/TRX reductase system in the cytosol as a source of reducing equivalents. DsbG differ from DsbC in that it has a more limited substrate specificity, and it may preferentially act later in the folding process to catalyze disulfide rearrangements in folded or partially folded proteins. Also included in the alignment is the predicted protein TrbB, whose gene was sequenced from the enterohemorrhagic E. coli type IV pilus gene cluster, which is required for efficient plasmid transfer.

>cd02962 TMX2 TMX2 family; composed of proteins similar to human TMX2, a 372-amino acid TRX-related transmembrane protein, identified and characterized through the cloning of its cDNA from a human fetal library

Probab=88.80  E-value=1.6  Score=37.85  Aligned_cols=38  Identities=16%  Similarity=0.216  Sum_probs=28.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh----C---CCcEEEEEcCCChhHH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN----F---GVAVSERDVSMDRGFK  163 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~----~---gV~y~ErDVs~d~~~r  163 (289)
                      ||.|.++      +|+.|+++...|+.    +   ++.|-.+|++.+++..
T Consensus        51 vV~Fya~------wC~~Ck~l~p~l~~la~~~~~~~v~f~~VDvd~~~~la   95 (152)
T cd02962          51 LVEFFTT------WSPECVNFAPVFAELSLKYNNNNLKFGKIDIGRFPNVA   95 (152)
T ss_pred             EEEEECC------CCHHHHHHHHHHHHHHHHcccCCeEEEEEECCCCHHHH
Confidence            6677777      99999998877743    2   4778899998776443

It contains a TRX domain but the redox active CXXC motif is replaced with SXXC. Sequence analysis predicts that TMX2 may be a Type I membrane protein, with its C-terminal half protruding on the luminal side of the endoplasmic reticulum (ER). In addition to the TRX domain, transmembrane region and ER-retention signal, TMX2 also contains a Myb DNA-binding domain repeat signature and a dileucine motif in the tail.

>cd02961 PDI_a_family Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants

Probab=88.70  E-value=2  Score=31.56  Aligned_cols=36  Identities=22%  Similarity=0.324  Sum_probs=24.6

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh----C----CCcEEEEEcCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN----F----GVAVSERDVSMD  159 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~----gV~y~ErDVs~d  159 (289)
                      .-+|+|+++      +|+.|+.+...|+.    +    ++.+..+|.+.+
T Consensus        17 ~~~v~f~~~------~C~~C~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~   60 (101)
T cd02961          17 DVLVEFYAP------WCGHCKALAPEYEKLAKELKGDGKVVVAKVDCTAN   60 (101)
T ss_pred             cEEEEEECC------CCHHHHhhhHHHHHHHHHhccCCceEEEEeeccch
Confidence            456666776      99999998887754    3    355566666643

Members of this family include PDI and PDI-related proteins like ERp72, ERp57 (or ERp60), ERp44, P5, PDIR, ERp46 and the transmembrane PDIs. PDI, ERp57, ERp72, P5, PDIR and ERp46 are all oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. These proteins usually contain multiple copies of a redox active TRX (a) domain containing a CXXC motif, and may also contain one or more redox inactive TRX-like (b) domains. Only one a domain is required for the oxidase function but multiple copies

>PLN02395 glutathione S-transferase

Probab=88.52  E-value=2.2  Score=37.07  Aligned_cols=71  Identities=15%  Similarity=0.121  Sum_probs=48.8

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.||...      . ..+.+|+-+|..+|++|+.+.|+...  ...+++.++...                    ..+  
T Consensus         3 ~~ly~~~------~-~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~--------------------g~v--   53 (215)
T PLN02395          3 LKVYGPA------F-ASPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPF--------------------GVV--   53 (215)
T ss_pred             EEEEcCC------c-CcHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCC--------------------CCC--
Confidence            5778743      2 35799999999999999988876421  123455554321                    134  


Q ss_pred             CCEEEECCeEEechHHHHHHHHh
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E~  220 (289)
                       |.+..+|..|-....+.++.++
T Consensus        54 -P~L~~~~~~l~ES~aI~~YL~~   75 (215)
T PLN02395         54 -PVIVDGDYKIFESRAIMRYYAE   75 (215)
T ss_pred             -CEEEECCEEEEcHHHHHHHHHH
Confidence             9999999888888777776543

>cd03004 PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains

Probab=88.24  E-value=2.8  Score=32.26  Aligned_cols=37  Identities=16%  Similarity=0.164  Sum_probs=26.1

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCCh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDR  160 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~  160 (289)
                      .-||.|+++      +|+.|+++...++.    +  .+.+-.+|.+.++
T Consensus        21 ~v~v~f~a~------wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~   63 (104)
T cd03004          21 PWLVDFYAP------WCGPCQALLPELRKAARALKGKVKVGSVDCQKYE   63 (104)
T ss_pred             eEEEEEECC------CCHHHHHHHHHHHHHHHHhcCCcEEEEEECCchH
Confidence            346667777      99999988776653    2  3667788887654

This subfamily is composed of the three TRX domains located at the C-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation. Also included in the alignment is the single complete TRX domain of an uncharacterized protein from Tetraodon nigroviridis, which also contains a DnaJ domain at its N-terminus.

>PRK10767 chaperone protein DnaJ; Provisional

Probab=88.00  E-value=0.43  Score=46.52  Aligned_cols=65  Identities=22%  Similarity=0.519  Sum_probs=40.7

Q ss_pred             HHHHhccCCCc---ccCCcccCCCCcee------EeCCCCCCcceeeeccCCCCccccccCCccCcCCcc---cCCCCC
Q 041824          223 FGELIEGIPIR---KLKGVCQGCADVRF------FPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLV---LCPLCS  289 (289)
Q Consensus       223 L~~lL~~~~~~---~~~~~C~~Cgg~rf------vpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLv---rCp~C~  289 (289)
                      |++++.+....   .....|..|.|.+.      ..|..|+|+-++......  ......|+.|+-.|.+   +|+.|.
T Consensus       126 Lee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~--~~~~~~C~~C~G~G~~~~~~C~~C~  202 (371)
T PRK10767        126 LEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGF--FTVQQTCPTCHGRGKIIKDPCKKCH  202 (371)
T ss_pred             hHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEeece--EEEEEeCCCCCCceeECCCCCCCCC
Confidence            55555443321   12457888887663      589999999766544311  1134688888888866   688773

>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional

Probab=87.84  E-value=2.6  Score=36.95  Aligned_cols=43  Identities=14%  Similarity=0.263  Sum_probs=30.8

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh--HHHHHHHH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG--FKEELREL  169 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~--~reEL~~l  169 (289)
                      +.||...       .++|.+|+-+|+.+||+|+.++|+...+  ...++.++
T Consensus         2 ~~Ly~~~-------~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~i   46 (215)
T PRK13972          2 IDLYFAP-------TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRI   46 (215)
T ss_pred             eEEEECC-------CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhh
Confidence            4577654       3789999999999999999888865322  23455554

>cd02972 DsbA_family DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins

Probab=87.79  E-value=1.7  Score=31.72  Aligned_cols=34  Identities=21%  Similarity=0.291  Sum_probs=25.8

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMD  159 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d  159 (289)
                      |++|+..      .|++|..+...|+..      ++.+..+.+...
T Consensus         1 i~~f~d~------~Cp~C~~~~~~l~~~~~~~~~~~~~~~~~~~~~   40 (98)
T cd02972           1 IVEFFDP------LCPYCYLFEPELEKLLYADDGGVRVVYRPFPLL   40 (98)
T ss_pred             CeEEECC------CCHhHHhhhHHHHHHHhhcCCcEEEEEeccccC
Confidence            5678888      999999998888763      567777776543

Members of this family contain a redox active CXXC motif (except GSTK and HCCA isomerase) imbedded in a TRX fold, and an alpha helical insert of about 75 residues (shorter in DsbC and DsbG) relative to TRX. DsbA is involved in the oxidative protein folding pathway in prokaryotes, catalyzing disulfide bond formation of proteins secreted into the bacterial periplasm. DsbC and DsbG function as protein disulfide isomerases and chaperones to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins.

>cd02959 ERp19 Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain

Probab=87.74  E-value=1.3  Score=36.25  Aligned_cols=35  Identities=20%  Similarity=0.255  Sum_probs=26.3

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh------CCCcEEEEEcCCCh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN------FGVAVSERDVSMDR  160 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~------~gV~y~ErDVs~d~  160 (289)
                      +|.|+++      +|++|+.....+..      ....|..+|++.+.
T Consensus        23 lV~F~a~------WC~~C~~~~~~~~~~~~~~~~~~~fv~v~vd~~~   63 (117)
T cd02959          23 MLLIHKT------WCGACKALKPKFAESKEISELSHNFVMVNLEDDE   63 (117)
T ss_pred             EEEEeCC------cCHHHHHHHHHHhhhHHHHhhcCcEEEEEecCCC
Confidence            4456666      99999999887776      34568888888664

Denaturation studies indicate that the reduced form is more stable than the oxidized form, suggesting that the protein is involved in disulfide bond formation. In vitro, ERp19 has been shown to possess thiol-disulfide oxidase activity which is dependent on the presence of both active site cysteines. Although described as protein disulfide isomerase (PDI)-like, the protein does not complement for PDI activity. ERp19 shows a wide tissue distribution but is most abundant in liver, testis, heart and kidney.

>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi

Probab=87.67  E-value=6.1  Score=29.79  Aligned_cols=61  Identities=15%  Similarity=0.267  Sum_probs=45.0

Q ss_pred             CCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEEEECCeE
Q 041824          128 RGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRY  207 (289)
Q Consensus       128 rgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI~G~~  207 (289)
                      .|+....++|-++..+|+-.|++|+.+... ++.        ..-                      -..||.|..+|+.
T Consensus        10 ~g~ps~sp~clk~~~~Lr~~~~~~~v~~~~-n~~--------~sp----------------------~gkLP~l~~~~~~   58 (73)
T cd03078          10 WGLPSVDPECLAVLAYLKFAGAPLKVVPSN-NPW--------RSP----------------------TGKLPALLTSGTK   58 (73)
T ss_pred             CCCCcCCHHHHHHHHHHHcCCCCEEEEecC-CCC--------CCC----------------------CCccCEEEECCEE
Confidence            456667799999999999999999765332 210        000                      0246999999999


Q ss_pred             EechHHHHHHHH
Q 041824          208 VGGAEEVLRIVE  219 (289)
Q Consensus       208 IGG~del~~L~E  219 (289)
                      |++++.+.+..+
T Consensus        59 i~d~~~Ii~~L~   70 (73)
T cd03078          59 ISGPEKIIEYLR   70 (73)
T ss_pred             ecChHHHHHHHH
Confidence            999999887654

Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.

>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]

Probab=87.42  E-value=1.7  Score=37.86  Aligned_cols=71  Identities=14%  Similarity=0.146  Sum_probs=49.4

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh-hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR-GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~-~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      .+|...      ..++|.+|+-+|..+|++|+.+.|+... ...+++.++....                    .+   |
T Consensus         2 ~L~~~~------~sp~~~kv~l~l~e~g~~ye~~~v~~~~~~~~~~~~~~nP~g--------------------kV---P   52 (211)
T COG0625           2 KLYGSP------TSPYSRKVRLALEEKGLPYEIVLVDLDAEQKPPDFLALNPLG--------------------KV---P   52 (211)
T ss_pred             eeecCC------CCcchHHHHHHHHHcCCCceEEEeCcccccCCHHHHhcCCCC--------------------CC---C
Confidence            356665      5599999999999999999999998764 3345555543221                    45   9


Q ss_pred             EEEECCe-EEechHHHHHHHHh
Q 041824          200 RVFVKGR-YVGGAEEVLRIVEE  220 (289)
Q Consensus       200 qIFI~G~-~IGG~del~~L~E~  220 (289)
                      .+-.++- .|-....|.++.++
T Consensus        53 vL~~~~~~~l~ES~AI~~YL~~   74 (211)
T COG0625          53 ALVDDDGEVLTESGAILEYLAE   74 (211)
T ss_pred             EEeeCCCCeeecHHHHHHHHHh
Confidence            9988775 56666666655443

>cd02965 HyaE HyaE family; HyaE is also called HupG and HoxO

Probab=87.37  E-value=2.1  Score=35.65  Aligned_cols=48  Identities=8%  Similarity=0.104  Sum_probs=29.8

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhC-----C-CcEEEEEcCCChhHHHHHHHHHcc
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENF-----G-VAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----g-V~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      ...|+.|+.+    -+.|+.|..+.-+|+..     + +.|-.+|++.++    ++....+-
T Consensus        28 ~~~v~~f~~~----~~~cp~c~~i~P~leela~e~~~~v~f~kVdid~~~----~la~~f~V   81 (111)
T cd02965          28 GDLVLLLAGD----PVRFPEVLDVAVVLPELLKAFPGRFRAAVVGRADEQ----ALAARFGV   81 (111)
T ss_pred             CCEEEEecCC----cccCcchhhhHhHHHHHHHHCCCcEEEEEEECCCCH----HHHHHcCC
Confidence            3345555555    01299999999888653     2 456678887664    55555554

They are proteins serving a critical role in the assembly of multimeric [NiFe] hydrogenases, the enzymes that catalyze the oxidation of molecular hydrogen to enable microorganisms to utilize hydrogen as the sole energy source. The E. coli HyaE protein is a chaperone that specifically interacts with the twin-arginine translocation (Tat) signal peptide of the [NiFe] hydrogenase-1 beta subunit precursor. Tat signal peptides target precursor proteins to the Tat protein export system, which facilitates the transport of fully folded proteins across the inner membrane. HyaE may be involved in regulating the traffic of [NiFe] hydrogenase-1 on the Tat transport pathway.

>PTZ00057 glutathione s-transferase; Provisional

Probab=87.28  E-value=6  Score=34.63  Aligned_cols=74  Identities=9%  Similarity=0.265  Sum_probs=47.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh-HHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG-FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~-~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +++||.-.      .-..+.+++-+|+..||+|+.+.+....+ +. +.++.....        .|          ....
T Consensus         4 ~~~L~y~~------~~~~~~~vrl~L~~~gi~ye~~~~~~~~~~~~-~~~~~~~~~--------~n----------P~g~   58 (205)
T PTZ00057          4 EIVLYYFD------ARGKAELIRLIFAYLGIEYTDKRFGENGDAFI-EFKNFKKEK--------DT----------PFEQ   58 (205)
T ss_pred             ceEEEecC------CCcchHHHHHHHHHcCCCeEEEeccccchHHH-HHHhccccC--------CC----------CCCC
Confidence            47889877      44778899999999999999998754221 11 112111000        01          1124


Q ss_pred             CCEEEECCeEEechHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRI  217 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L  217 (289)
                      +|.+.+||..|....-+.+.
T Consensus        59 vP~L~~~~~~l~eS~AI~~Y   78 (205)
T PTZ00057         59 VPILEMDNIIFAQSQAIVRY   78 (205)
T ss_pred             CCEEEECCEEEecHHHHHHH
Confidence            49999999888777666653

>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]

Probab=87.13  E-value=2  Score=39.86  Aligned_cols=63  Identities=19%  Similarity=0.258  Sum_probs=48.4

Q ss_pred             CCCHHHHHHHHHHHhCCCcEEE--EEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEEEECCeEEe
Q 041824          132 KTYEACKAAKSVIENFGVAVSE--RDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVG  209 (289)
Q Consensus       132 ~tC~~C~~ak~iL~~~gV~y~E--rDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI~G~~IG  209 (289)
                      --|++|+++-..|..++++|..  +|++.-+   ++++.+....                    .+   |.|-.|+..+-
T Consensus        19 Gdcpf~qr~~m~L~~k~~~f~vttVd~~~kp---~~f~~~sp~~--------------------~~---P~l~~d~~~~t   72 (221)
T KOG1422|consen   19 GDCPFCQRLFMTLELKGVPFKVTTVDLSRKP---EWFLDISPGG--------------------KP---PVLKFDEKWVT   72 (221)
T ss_pred             CCChhHHHHHHHHHHcCCCceEEEeecCCCc---HHHHhhCCCC--------------------CC---CeEEeCCceec
Confidence            4799999999999999999875  5555444   4666665432                    34   99999999999


Q ss_pred             chHHHHHHHHh
Q 041824          210 GAEEVLRIVEE  220 (289)
Q Consensus       210 G~del~~L~E~  220 (289)
                      ..+.+.+..|+
T Consensus        73 Ds~~Ie~~Lee   83 (221)
T KOG1422|consen   73 DSDKIEEFLEE   83 (221)
T ss_pred             cHHHHHHHHHH
Confidence            99888765543

>PRK14300 chaperone protein DnaJ; Provisional

Probab=87.03  E-value=0.47  Score=46.44  Aligned_cols=66  Identities=23%  Similarity=0.437  Sum_probs=41.6

Q ss_pred             cHHHHhccCCCc---ccCCcccCCCCce------eEeCCCCCCcceeeeccCCCCccccccCCccCcCCcc---cCCCCC
Q 041824          222 WFGELIEGIPIR---KLKGVCQGCADVR------FFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLV---LCPLCS  289 (289)
Q Consensus       222 ~L~~lL~~~~~~---~~~~~C~~Cgg~r------fvpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLv---rCp~C~  289 (289)
                      .|++++.+....   .....|..|.|.+      ...|..|+|+-+++.....  ......|+.|+-.|.+   +|+.|.
T Consensus       128 sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~--~~~~~~C~~C~G~G~~~~~~C~~C~  205 (372)
T PRK14300        128 NLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGF--FTIEQACHKCQGNGQIIKNPCKKCH  205 (372)
T ss_pred             EHHHHhCCceEEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEEEEeece--EEEEEeCCCCCccceEeCCCCCCCC
Confidence            355555554321   1235677777754      5789999999776653211  1134689999988865   688773

>cd02996 PDI_a_ERp44 PDIa family, endoplasmic reticulum protein 44 (ERp44) subfamily; ERp44 is an ER-resident protein, induced during stress, involved in thiol-mediated ER retention

Probab=86.92  E-value=2.3  Score=33.23  Aligned_cols=36  Identities=11%  Similarity=0.107  Sum_probs=25.9

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC------------CCcEEEEEcCCCh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF------------GVAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~------------gV~y~ErDVs~d~  160 (289)
                      -+|.|.++      +|++|++....|+..            .+.|-.+|.+.++
T Consensus        21 vlv~F~a~------wC~~C~~~~p~~~~~a~~~~~~~~~~~~~~~~~vd~d~~~   68 (108)
T cd02996          21 VLVNFYAD------WCRFSQMLHPIFEEAAAKIKEEFPDAGKVVWGKVDCDKES   68 (108)
T ss_pred             EEEEEECC------CCHHHHhhHHHHHHHHHHHhhccCCCCcEEEEEEECCCCH
Confidence            35666777      999999998877521            3667778887653

It contains an N-terminal TRX domain, similar to that of PDIa, with a CXFS motif followed by two redox inactive TRX-like domains, homologous to the b and b' domains of PDI. The CXFS motif in the N-terminal domain allows ERp44 to form stable reversible mixed disulfides with its substrates. Through this activity, ERp44 mediates the ER localization of Ero1alpha, a protein that oxidizes protein disulfide isomerases into their active form. ERp44 also prevents the secretion of unassembled cargo protein with unpaired cysteines. It also modulates the activity of inositol 1,4,5-triphosphate type I receptor (IP3R1), an intracellular channel protein that mediates calcium release from the ER to the cytosol.

>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain

Probab=86.91  E-value=5.6  Score=31.68  Aligned_cols=36  Identities=17%  Similarity=0.314  Sum_probs=25.1

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHH----h---CCCcEEEEEcCCCh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIE----N---FGVAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~----~---~gV~y~ErDVs~d~  160 (289)
                      -||.|.++      +|+.|+....+|+    .   .++.+-.+|++.++
T Consensus        27 vlV~F~a~------wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d~~~   69 (111)
T cd02963          27 YLIKITSD------WCFSCIHIEPVWKEVIQELEPLGVGIATVNAGHER   69 (111)
T ss_pred             EEEEEECC------ccHhHHHhhHHHHHHHHHHHhcCceEEEEeccccH
Confidence            35556666      9999987765543    2   35778888887654

DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.

>cd02987 Phd_like_Phd Phosducin (Phd)-like family, Phd subfamily; Phd is a cytosolic regulator of G protein functions

Probab=86.58  E-value=2.2  Score=37.44  Aligned_cols=35  Identities=20%  Similarity=0.232  Sum_probs=24.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C-CCcEEEEEcCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F-GVAVSERDVSM  158 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~-gV~y~ErDVs~  158 (289)
                      .|||+...     .+|+.|+.+..+|+.    + .|.|..+|++.
T Consensus        85 ~VVV~Fya-----~wc~~Ck~m~~~l~~LA~~~~~vkF~kVd~d~  124 (175)
T cd02987          85 TVVVHIYE-----PGIPGCAALNSSLLCLAAEYPAVKFCKIRASA  124 (175)
T ss_pred             EEEEEEEC-----CCCchHHHHHHHHHHHHHHCCCeEEEEEeccc
Confidence            46655543     299999988877754    3 47788888874

It specifically binds G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane. This impedes the formation of a functional G protein trimer (G protein alphabetagamma), thereby inhibiting G protein-mediated signal transduction. Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-terminal helical domain.

>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione

Probab=86.30  E-value=4.8  Score=30.01  Aligned_cols=60  Identities=13%  Similarity=0.149  Sum_probs=40.6

Q ss_pred             HHHHHHHHHHhCCCcEEEEEcCCC--hhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEEEEC-CeEEechH
Q 041824          136 ACKAAKSVIENFGVAVSERDVSMD--RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVK-GRYVGGAE  212 (289)
Q Consensus       136 ~C~~ak~iL~~~gV~y~ErDVs~d--~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI~-G~~IGG~d  212 (289)
                      .+..++.+|+..||+|+.+.++.+  ....+|+.+.....                      ..+|.+-++ |..|-..-
T Consensus        11 ~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~----------------------g~vP~l~~~~~~~l~es~   68 (76)
T PF02798_consen   11 RSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMF----------------------GKVPALEDGDGFVLTESN   68 (76)
T ss_dssp             TTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTS----------------------SSSSEEEETTTEEEESHH
T ss_pred             chHHHHHHHHHhcccCceEEEecccccccchhhhhccccc----------------------ceeeEEEECCCCEEEcHH
Confidence            789999999999999998877653  33336666553220                      134999999 98887766


Q ss_pred             HHHHH
Q 041824          213 EVLRI  217 (289)
Q Consensus       213 el~~L  217 (289)
                      .+.+.
T Consensus        69 AI~~Y   73 (76)
T PF02798_consen   69 AILRY   73 (76)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66554

The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....

>PRK10996 thioredoxin 2; Provisional

Probab=86.00  E-value=4.5  Score=33.84  Aligned_cols=37  Identities=14%  Similarity=0.231  Sum_probs=25.2

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|+.|+.....|..    +  ++.|-.+|++.++.
T Consensus        55 vvv~F~a~------wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~   97 (139)
T PRK10996         55 VVIDFWAP------WCGPCRNFAPIFEDVAAERSGKVRFVKVNTEAERE   97 (139)
T ss_pred             EEEEEECC------CCHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCHH
Confidence            35556666      99999988777654    2  45666778876543

>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]

Probab=85.98  E-value=0.87  Score=49.56  Aligned_cols=52  Identities=19%  Similarity=0.408  Sum_probs=36.8

Q ss_pred             eEEechHHHHHHHHhCcHHHHhccCCCcc-----cCCcccCCCCcee------------EeCCCCCCcce
Q 041824          206 RYVGGAEEVLRIVEEGWFGELIEGIPIRK-----LKGVCQGCADVRF------------FPCFRCNGSCK  258 (289)
Q Consensus       206 ~~IGG~del~~L~E~G~L~~lL~~~~~~~-----~~~~C~~Cgg~rf------------vpC~~C~GS~K  258 (289)
                      .|+|-||++++|..+=. +...++..+..     .++.|+.|+|-++            |||+.|+|.+-
T Consensus       696 TYtg~Fd~IR~lFA~tp-eAK~rGyk~grFSFNvkGGRCe~C~GdG~ikIeM~FLpdVyv~CevC~GkRY  764 (935)
T COG0178         696 TYTGVFDDIRELFAGTP-EAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEVCHGKRY  764 (935)
T ss_pred             chhcchHHHHHHHhcCh-HHHHcCCCcccccccCCCcCCccccCCceEEEEeccCCCceeeCCCcCCccc
Confidence            47788999998875433 33334443322     3689999999886            89999999863

>cd03001 PDI_a_P5 PDIa family, P5 subfamily; composed of eukaryotic proteins similar to human P5, a PDI-related protein with a domain structure of aa'b (where a and a' are redox active TRX domains and b is a redox inactive TRX-like domain)

Probab=85.97  E-value=4.5  Score=30.64  Aligned_cols=36  Identities=17%  Similarity=0.186  Sum_probs=24.9

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCCh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~  160 (289)
                      -+++|.++      +|+.|++.+..|..    +  .+.+-.+|++.+.
T Consensus        21 vlv~f~a~------~C~~C~~~~~~~~~~~~~~~~~~~~~~id~~~~~   62 (103)
T cd03001          21 WLVEFYAP------WCGHCKNLAPEWKKAAKALKGIVKVGAVDADVHQ   62 (103)
T ss_pred             EEEEEECC------CCHHHHHHhHHHHHHHHHhcCCceEEEEECcchH
Confidence            35556666      99999998877754    2  4567778877554

Like PDI, P5 is located in the endoplasmic reticulum (ER) and displays both isomerase and chaperone activities, which are independent of each other. Compared to PDI, the isomerase and chaperone activities of P5 are lower. The first cysteine in the CXXC motif of both redox active domains in P5 is necessary for isomerase activity. The P5 gene was first isolated as an amplified gene from a hydroxyurea-resistant hamster cell line. The zebrafish P5 homolog has been implicated to play a critical role in establishing left/right asymmetries in the embryonic midline. Some members of this subfamily are P5-like proteins containing only one redox active TRX domain.

>PF13901 DUF4206: Domain of unknown function (DUF4206)

Probab=84.85  E-value=0.24  Score=44.76  Aligned_cols=84  Identities=18%  Similarity=0.336  Sum_probs=59.4

Q ss_pred             CEEEECCeEEechHHHHHHHHhCcHHHHhccCCCcc--cCCcccCCCCceeEeCCCCCCcceeeeccCCCCccccccCCc
Q 041824          199 PRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIRK--LKGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPD  276 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~~~--~~~~C~~Cgg~rfvpC~~C~GS~K~~~~~~~~g~~~~~rC~~  276 (289)
                      |.-+++.-++=...||.++. +|.|.+.|+.+-...  ....|+-|-+.+| .|..|+.+.-++--+ .   ....||+.
T Consensus       104 ~~hl~~~~~~YSl~DL~~v~-~G~L~~~L~~l~~~~~~HV~~C~lC~~kGf-iCe~C~~~~~IfPF~-~---~~~~~C~~  177 (202)
T PF13901_consen  104 RDHLLEDPHLYSLADLVQVK-SGQLLPQLEKLVQFAEKHVYSCELCQQKGF-ICEICNSDDIIFPFQ-I---DTTVRCPK  177 (202)
T ss_pred             hhhhhhCCceEcHHHHHHHh-hchHHHHHHHHHHHHHHHHHHhHHHHhCCC-CCccCCCCCCCCCCC-C---CCeeeCCc
Confidence            77778888888889998874 799999988764322  2348999999998 799999984333222 1   13789999


Q ss_pred             cCcCCc------ccCCCC
Q 041824          277 CNENGL------VLCPLC  288 (289)
Q Consensus       277 CNENGL------vrCp~C  288 (289)
                      |+--=-      ..||.|
T Consensus       178 C~~v~H~~C~~~~~CpkC  195 (202)
T PF13901_consen  178 CKSVFHKSCFRKKSCPKC  195 (202)
T ss_pred             CccccchhhcCCCCCCCc
Confidence            874211      457766

>PRK14284 chaperone protein DnaJ; Provisional

Probab=84.57  E-value=0.91  Score=44.75  Aligned_cols=51  Identities=31%  Similarity=0.681  Sum_probs=33.5

Q ss_pred             CCcccCCCCcee------EeCCCCCCcceeeeccCCCCccccccCCccCcCCcc---cCCCC
Q 041824          236 KGVCQGCADVRF------FPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       236 ~~~C~~Cgg~rf------vpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLv---rCp~C  288 (289)
                      ...|..|.|.+.      ..|..|+|+-.++.....  ......|+.|+-.|.+   .|+.|
T Consensus       158 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~--~~~~~~C~~C~G~G~~~~~~C~~C  217 (391)
T PRK14284        158 YKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGF--FSMASTCPECGGEGRVITDPCSVC  217 (391)
T ss_pred             eccCCCCcccccCCCCCCeecCccCCeeEEEEEece--EEEEEECCCCCCCCcccCCcCCCC
Confidence            357888876654      679999999765543211  1134688888888865   57777

>cd02952 TRP14_like Human TRX-related protein 14 (TRP14)-like family; composed of proteins similar to TRP14, a 14kD cytosolic protein that shows disulfide reductase activity in vitro with a different substrate specificity compared with another human cytosolic protein, TRX1

Probab=84.43  E-value=2.8  Score=35.07  Aligned_cols=28  Identities=18%  Similarity=0.140  Sum_probs=20.8

Q ss_pred             CCHHHHHHHHHH----HhC--CCcEEEEEcCCCh
Q 041824          133 TYEACKAAKSVI----ENF--GVAVSERDVSMDR  160 (289)
Q Consensus       133 tC~~C~~ak~iL----~~~--gV~y~ErDVs~d~  160 (289)
                      +|+.|+.+.-+|    +.+  ++.|..+|+...+
T Consensus        39 WC~pCr~~~P~l~~l~~~~~~~v~fv~Vdvd~~~   72 (119)
T cd02952          39 WCPDCVKAEPVVREALKAAPEDCVFIYCDVGDRP   72 (119)
T ss_pred             CCHhHHhhchhHHHHHHHCCCCCEEEEEEcCCcc
Confidence            999999776655    444  4788899997643

TRP14 catalyzes the reduction of small disulfide-containing peptides but does not reduce disulfides of ribonucleotide reductase, peroxiredoxin and methionine sulfoxide reductase, which are TRX1 substrates. TRP14 also plays a role in tumor necrosis factor (TNF)-alpha signaling pathways, distinct from that of TRX1. Its depletion promoted TNF-alpha induced activation of c-Jun N-terminal kinase and mitogen-activated protein kinases.

>PRK14285 chaperone protein DnaJ; Provisional

Probab=84.14  E-value=0.98  Score=44.20  Aligned_cols=51  Identities=27%  Similarity=0.615  Sum_probs=32.7

Q ss_pred             CCcccCCCCce------eEeCCCCCCcceeeeccCCCCccccccCCccCcCCcc---cCCCC
Q 041824          236 KGVCQGCADVR------FFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       236 ~~~C~~Cgg~r------fvpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLv---rCp~C  288 (289)
                      ...|..|.|.+      -..|..|+|+-.+......  ......|+.|+-.|-+   .|+.|
T Consensus       146 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~--~~~~~~C~~C~G~G~~~~~~C~~C  205 (365)
T PRK14285        146 NMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGF--FRVTTTCPKCYGNGKIISNPCKSC  205 (365)
T ss_pred             cccCCCCCCcccCCCCCCccCCCccCceeEEecCce--eEEeeecCCCCCcccccCCCCCCC
Confidence            35677777765      3578899998766543211  1134678888888754   57776

>PRK14298 chaperone protein DnaJ; Provisional

Probab=84.04  E-value=1  Score=44.32  Aligned_cols=66  Identities=23%  Similarity=0.542  Sum_probs=39.8

Q ss_pred             HHHHhccCCCc---ccCCcccCCCCcee------EeCCCCCCcceeeeccCCC-C-ccccccCCccCcCCcc---cCCCC
Q 041824          223 FGELIEGIPIR---KLKGVCQGCADVRF------FPCFRCNGSCKLVINMQPR-G-KTAALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       223 L~~lL~~~~~~---~~~~~C~~Cgg~rf------vpC~~C~GS~K~~~~~~~~-g-~~~~~rC~~CNENGLv---rCp~C  288 (289)
                      |++++.+....   .....|..|.|.+.      ..|..|+|+-.++...... + ......|+.|+-.|.+   +|+.|
T Consensus       125 lee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C  204 (377)
T PRK14298        125 LEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVC  204 (377)
T ss_pred             HHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCC
Confidence            55555543321   12357888887665      6799999997665432111 1 1124678888888854   57777

>cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains

Probab=83.94  E-value=3.9  Score=31.44  Aligned_cols=36  Identities=14%  Similarity=0.256  Sum_probs=25.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCCh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~  160 (289)
                      -+|.|+++      +|+.|+++...++..      .+.+-.+|++.++
T Consensus        21 ~~v~f~a~------wC~~C~~~~p~~~~~a~~~~~~~~~~~vd~~~~~   62 (101)
T cd03003          21 WFVNFYSP------RCSHCHDLAPTWREFAKEMDGVIRIGAVNCGDDR   62 (101)
T ss_pred             EEEEEECC------CChHHHHhHHHHHHHHHHhcCceEEEEEeCCccH
Confidence            35566666      999999988887542      2556778887654

This subfamily is comprised of the first TRX domain of ERdj5 located after the DnaJ domain at the N-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation.

>cd02998 PDI_a_ERp38 PDIa family, endoplasmic reticulum protein 38 (ERp38) subfamily; composed of proteins similar to the P5-like protein first isolated from alfalfa, which contains two redox active TRX (a) domains at the N-terminus, like human P5, and a C-terminal domain with homology to the C-terminal domain of ERp29, unlike human P5

Probab=83.69  E-value=4.1  Score=30.69  Aligned_cols=34  Identities=21%  Similarity=0.309  Sum_probs=24.4

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C----CCcEEEEEcCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F----GVAVSERDVSM  158 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~----gV~y~ErDVs~  158 (289)
                      -|+.|+++      +|+.|++...+++.    +    ++.+-.+|.+.
T Consensus        21 ~~v~f~a~------~C~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~   62 (105)
T cd02998          21 VLVEFYAP------WCGHCKNLAPEYEKLAAVFANEDDVVIAKVDADE   62 (105)
T ss_pred             EEEEEECC------CCHHHHhhChHHHHHHHHhCCCCCEEEEEEECCC
Confidence            46677777      99999988777654    2    35566777776

The cDNA clone of this protein (named G1) was isolated from an alfalfa cDNA library by screening with human protein disulfide isomerase (PDI) cDNA. The G1 protein is constitutively expressed in all major organs of the plant and its expression is induced by treatment with tunicamycin, indicating that it may be a glucose-regulated protein. The G1 homolog in the eukaryotic social amoeba Dictyostelium discoideum is also described as a P5-like protein, which is located in the endoplasmic reticulum (ER) despite the absence of an ER-retrieval signal. G1 homologs from Aspergillus niger and Neurospora crassa have also been characterized, and are named TIGA and ER

>PRK14295 chaperone protein DnaJ; Provisional

Probab=83.63  E-value=0.83  Score=45.09  Aligned_cols=51  Identities=29%  Similarity=0.746  Sum_probs=33.4

Q ss_pred             CCcccCCCCcee------EeCCCCCCcceeeeccCCCCccccccCCccCcCCcc---cCCCC
Q 041824          236 KGVCQGCADVRF------FPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       236 ~~~C~~Cgg~rf------vpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLv---rCp~C  288 (289)
                      ...|..|.|.+.      ..|..|+|+-.+....  ++.....+|+.|+-.|.+   .|+.|
T Consensus       166 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~--g~~~~~~~C~~C~G~G~~~~~~C~~C  225 (389)
T PRK14295        166 QAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS--GGFSLSEPCPDCKGRGLIADDPCLVC  225 (389)
T ss_pred             cccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe--cceEEEEecCCCcceeEEeccCCCCC
Confidence            346777776553      6788999887665442  222245688888888865   47777

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=83.43  E-value=0.94  Score=44.48  Aligned_cols=53  Identities=28%  Similarity=0.534  Sum_probs=36.7

Q ss_pred             CcccCCCCcee-----EeCCCCCCcceeeeccCCCC---ccccccCCccCcCCcc-----cCCCCC
Q 041824          237 GVCQGCADVRF-----FPCFRCNGSCKLVINMQPRG---KTAALRCPDCNENGLV-----LCPLCS  289 (289)
Q Consensus       237 ~~C~~Cgg~rf-----vpC~~C~GS~K~~~~~~~~g---~~~~~rC~~CNENGLv-----rCp~C~  289 (289)
                      ..|..|-|.++     .+|..|+|+.-.....+...   ....++|..||..|-+     +|+.|.
T Consensus       128 ~iCs~C~GsGgksg~~~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~  193 (337)
T KOG0712|consen  128 FICSKCSGSGGKSGSAPKCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCS  193 (337)
T ss_pred             ccCCcCCCCCCCCCCCCCCCCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccc
Confidence            46777766655     45999999964332211111   2346899999999999     999994

>PRK14287 chaperone protein DnaJ; Provisional

Probab=83.42  E-value=1.1  Score=43.90  Aligned_cols=54  Identities=24%  Similarity=0.619  Sum_probs=36.1

Q ss_pred             CCcccCCCCce------eEeCCCCCCcceeeeccCCC-Cc-cccccCCccCcCCcc---cCCCCC
Q 041824          236 KGVCQGCADVR------FFPCFRCNGSCKLVINMQPR-GK-TAALRCPDCNENGLV---LCPLCS  289 (289)
Q Consensus       236 ~~~C~~Cgg~r------fvpC~~C~GS~K~~~~~~~~-g~-~~~~rC~~CNENGLv---rCp~C~  289 (289)
                      ...|..|.|.+      ...|..|+|+-.+....... |. .....|+.|+-.|.+   .|+.|.
T Consensus       138 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~  202 (371)
T PRK14287        138 EETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCG  202 (371)
T ss_pred             eccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCC
Confidence            35788887765      46799999997665443111 10 124689999999976   588773

>PRK14290 chaperone protein DnaJ; Provisional

Probab=83.25  E-value=1.1  Score=43.73  Aligned_cols=52  Identities=25%  Similarity=0.646  Sum_probs=34.2

Q ss_pred             CCcccCCCCcee-----EeCCCCCCcceeeeccCCCCcc---ccccCCccCcCCc---ccCCCC
Q 041824          236 KGVCQGCADVRF-----FPCFRCNGSCKLVINMQPRGKT---AALRCPDCNENGL---VLCPLC  288 (289)
Q Consensus       236 ~~~C~~Cgg~rf-----vpC~~C~GS~K~~~~~~~~g~~---~~~rC~~CNENGL---vrCp~C  288 (289)
                      ...|..|.|.+.     ..|..|+|+-++..... .|..   ...+|+.|+-.|-   ..|+.|
T Consensus       149 ~~~C~~C~G~g~~~~~~~~C~~C~G~G~~~~~~~-~g~~~~~~~~~C~~C~G~G~~~~~~C~~C  211 (365)
T PRK14290        149 NAMCPDCSGTGAKNGKLITCPTCHGTGQQRIVRG-QGFFRMVTVTTCRTCGGRGRIPEEKCPRC  211 (365)
T ss_pred             cccCCCCccccCCCCCCccCCCCCCcCEEEEEec-cCeEEEEEEEeCCCCCCceeEccCCCCCC
Confidence            356777777664     67999999976654432 1211   1357888888884   468877

>cd03002 PDI_a_MPD1_like PDI family, MPD1-like subfamily; composed of eukaryotic proteins similar to Saccharomyces cerevisiae MPD1 protein, which contains a single redox active TRX domain located at the N-terminus, and an ER retention signal at the C-terminus indicative of an ER-resident protein

Probab=82.80  E-value=5.3  Score=30.73  Aligned_cols=34  Identities=21%  Similarity=0.179  Sum_probs=23.6

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSM  158 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~  158 (289)
                      -+|.|.++      +|+.|++....|+..      .+.+-.+|++.
T Consensus        21 ~lv~f~a~------wC~~C~~~~~~~~~~a~~~~~~~~~~~v~~~~   60 (109)
T cd03002          21 TLVEFYAP------WCGHCKNLKPEYAKAAKELDGLVQVAAVDCDE   60 (109)
T ss_pred             EEEEEECC------CCHHHHhhChHHHHHHHHhcCCceEEEEecCc
Confidence            46667777      999999887766543      34556667765

MPD1 has been shown to suppress the maturation defect of carboxypeptidase Y caused by deletion of the yeast PDI1 gene. Other characterized members of this subfamily include the Aspergillus niger prpA protein and Giardia PDI-1. PrpA is non-essential to strain viability, however, its transcript level is induced by heterologous protein expression suggesting a possible role in oxidative protein folding during high protein production. Giardia PDI-1 has the ability to refold scrambled RNase and exhibits transglutaminase activity.

>cd03065 PDI_b_Calsequestrin_N PDIb family, Calsequestrin subfamily, N-terminal TRX-fold domain; Calsequestrin is the major calcium storage protein in the sarcoplasmic reticulum (SR) of skeletal and cardiac muscle

Probab=82.76  E-value=5.2  Score=33.36  Aligned_cols=47  Identities=19%  Similarity=0.239  Sum_probs=31.9

Q ss_pred             CCcEEEEEecCCCCCCCCH--HHH----------HHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          117 ENKVVIYTTTLRGIRKTYE--ACK----------AAKSVIENFGVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~--~C~----------~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      +.-||+|..+     .+|.  +|+          .+.++|+..+|.+-.+|++.++    +|.+..|.
T Consensus        27 ~~~vvv~f~a-----~wc~p~~Ck~~~~~p~~~~~aa~~l~~~~v~~~kVD~d~~~----~La~~~~I   85 (120)
T cd03065          27 DVLCLLYHEP-----VESDKEAQKQFQMEELVLELAAQVLEDKGIGFGLVDSKKDA----KVAKKLGL   85 (120)
T ss_pred             CceEEEEECC-----CcCChhhChhhcchhhHHHHHHHHhhcCCCEEEEEeCCCCH----HHHHHcCC
Confidence            4457788777     1443  586          3556677779999999999775    45555554

It stores calcium ions in sufficient quantities (up to 20 mM) to allow repetitive contractions and is essential to maintain movement, respiration and heart beat. A missense mutation in human cardiac calsequestrin is associated with catecholamine-induced polymorphic ventricular tachycardia (CPVT), a rare disease characterized by seizures or sudden death in response to physiologic or emotional stress. Calsequestrin is a highly acidic protein with up to 50 calcium binding sites formed simply by the clustering of two or more acidic residues. The monomer contains three redox inactive TRX-fold domains. Calsequestrin is condensed as a linear polymer in the SR lumen and is membrane-anchored through binding with intra-membrane proteins triadin, junctin and ryanodine receptor (RyR) Ca2

>PRK14292 chaperone protein DnaJ; Provisional

Probab=82.72  E-value=1.2  Score=43.59  Aligned_cols=67  Identities=21%  Similarity=0.506  Sum_probs=41.2

Q ss_pred             cHHHHhccCCCc---ccCCcccCCCCce-------eEeCCCCCCcceeeeccCC-CCc-cccccCCccCcCCcc---cCC
Q 041824          222 WFGELIEGIPIR---KLKGVCQGCADVR-------FFPCFRCNGSCKLVINMQP-RGK-TAALRCPDCNENGLV---LCP  286 (289)
Q Consensus       222 ~L~~lL~~~~~~---~~~~~C~~Cgg~r-------fvpC~~C~GS~K~~~~~~~-~g~-~~~~rC~~CNENGLv---rCp  286 (289)
                      .|++++.+..+.   .....|..|.|.+       ...|..|+|+-.+...... .|. .....|+.|+-.|.+   .|+
T Consensus       122 sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~  201 (371)
T PRK14292        122 TLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCT  201 (371)
T ss_pred             cHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCC
Confidence            355665553321   1235788888765       4679999999766543210 010 013589999888866   677


Q ss_pred             CC
Q 041824          287 LC  288 (289)
Q Consensus       287 ~C  288 (289)
                      .|
T Consensus       202 ~C  203 (371)
T PRK14292        202 VC  203 (371)
T ss_pred             CC
Confidence            77

>PRK14286 chaperone protein DnaJ; Provisional

Probab=82.58  E-value=0.98  Score=44.30  Aligned_cols=65  Identities=23%  Similarity=0.453  Sum_probs=37.4

Q ss_pred             cHHHHhccCCCc---ccCCcccCCCCcee------EeCCCCCCcceeeeccCCCCccccccCCccCcCCcc---cCCCC
Q 041824          222 WFGELIEGIPIR---KLKGVCQGCADVRF------FPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       222 ~L~~lL~~~~~~---~~~~~C~~Cgg~rf------vpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLv---rCp~C  288 (289)
                      .|++++.+....   .....|..|.|.+.      ..|..|+|+-.+......  ......|+.|+--|.+   +|+.|
T Consensus       133 tLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~--~~~~~~C~~C~G~G~~~~~~C~~C  209 (372)
T PRK14286        133 SLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGF--FSVATTCPTCRGKGTVISNPCKTC  209 (372)
T ss_pred             EHHHHhCCeeEEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEece--EEEEEeCCCCCceeeEecccCCCC
Confidence            355555543321   12357888887664      678888888755443211  1124577777777643   56666

>PRK14282 chaperone protein DnaJ; Provisional

Probab=82.45  E-value=1.3  Score=43.33  Aligned_cols=52  Identities=21%  Similarity=0.669  Sum_probs=33.7

Q ss_pred             CcccCCCCce------eEeCCCCCCcceeeeccCCC-C-ccccccCCccCcCCcc---cCCCC
Q 041824          237 GVCQGCADVR------FFPCFRCNGSCKLVINMQPR-G-KTAALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       237 ~~C~~Cgg~r------fvpC~~C~GS~K~~~~~~~~-g-~~~~~rC~~CNENGLv---rCp~C  288 (289)
                      ..|..|.|.+      ...|..|+|+-.++...... | ......|+.|+-.|.+   .|+.|
T Consensus       153 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C  215 (369)
T PRK14282        153 ETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHEC  215 (369)
T ss_pred             ccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCC
Confidence            5677777755      46799999997665432110 1 1124688888888865   57776

>PRK14301 chaperone protein DnaJ; Provisional

Probab=82.20  E-value=0.99  Score=44.29  Aligned_cols=65  Identities=26%  Similarity=0.531  Sum_probs=37.6

Q ss_pred             cHHHHhccCCCc---ccCCcccCCCCcee------EeCCCCCCcceeeeccCCCCccccccCCccCcCCcc---cCCCC
Q 041824          222 WFGELIEGIPIR---KLKGVCQGCADVRF------FPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       222 ~L~~lL~~~~~~---~~~~~C~~Cgg~rf------vpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLv---rCp~C  288 (289)
                      .|++++.+....   .....|..|.|.+.      ..|..|+|+-.+......  ......|+.|+-.|.+   .|+.|
T Consensus       127 tLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~--~~~~~~C~~C~G~G~~~~~~C~~C  203 (373)
T PRK14301        127 SFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGF--FQIAVPCPVCRGEGRVITHPCPKC  203 (373)
T ss_pred             cHHHHhCCceEEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeee--EEEEEeCCCCCceeeecCCCCCCC
Confidence            355555543321   12356777777654      568888888766543211  1124678888777754   57766

>PRK14291 chaperone protein DnaJ; Provisional

Probab=82.18  E-value=1.1  Score=44.01  Aligned_cols=64  Identities=22%  Similarity=0.481  Sum_probs=39.9

Q ss_pred             HHHHhccCCCc---ccCCcccCCCCce------eEeCCCCCCcceeeeccCCCCccccccCCccCcCCcc--cCCCC
Q 041824          223 FGELIEGIPIR---KLKGVCQGCADVR------FFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLV--LCPLC  288 (289)
Q Consensus       223 L~~lL~~~~~~---~~~~~C~~Cgg~r------fvpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLv--rCp~C  288 (289)
                      |++++.+....   .....|..|.|.+      ...|..|+|+-.++.....  ......|+.|+--|.+  .|+.|
T Consensus       140 Lee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~--~~~~~~C~~C~G~G~~~~~C~~C  214 (382)
T PRK14291        140 LEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGF--FRISQTCPTCGGEGVLREPCSKC  214 (382)
T ss_pred             HHHhhCCEEEEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEecce--EEEEecCCCCCCceEEccCCCCC
Confidence            55555543321   1235788888766      4679999999766554211  1234688888888854  47776

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=82.06  E-value=1.3  Score=43.73  Aligned_cols=21  Identities=29%  Similarity=0.741  Sum_probs=16.5

Q ss_pred             CcccCCCCceeEeCCCCCCcc
Q 041824          237 GVCQGCADVRFFPCFRCNGSC  257 (289)
Q Consensus       237 ~~C~~Cgg~rfvpC~~C~GS~  257 (289)
                      ..|.+|-|.+-+.|..|||+-
T Consensus       188 ~~ch~c~gRG~~vc~gc~g~G  208 (406)
T KOG2813|consen  188 TFCHACLGRGAMVCHGCSGSG  208 (406)
T ss_pred             hhhhcccCCCceeccCcCCCC
Confidence            468888888888888888775

>PRK14294 chaperone protein DnaJ; Provisional

Probab=82.05  E-value=1.2  Score=43.49  Aligned_cols=51  Identities=25%  Similarity=0.585  Sum_probs=32.5

Q ss_pred             CCcccCCCCcee------EeCCCCCCcceeeeccCCCCccccccCCccCcCCcc---cCCCC
Q 041824          236 KGVCQGCADVRF------FPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       236 ~~~C~~Cgg~rf------vpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLv---rCp~C  288 (289)
                      ...|..|.|.+.      ..|..|+|+-.+......  ......|+.|+-.|.+   .|+.|
T Consensus       144 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~--~~~~~~C~~C~G~G~~~~~~C~~C  203 (366)
T PRK14294        144 LETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGF--FSIRTTCPRCRGMGKVIVSPCKTC  203 (366)
T ss_pred             cccCCCCCCccccCCCCcccCCCcCCeEEEEEEeee--EEEEeeCCCCCCcCeecCcCCCCC
Confidence            356777777654      578999988765533211  1134678888877755   57666

>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]

Probab=81.90  E-value=2.1  Score=39.24  Aligned_cols=77  Identities=16%  Similarity=0.159  Sum_probs=51.7

Q ss_pred             EEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEE
Q 041824          122 IYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRV  201 (289)
Q Consensus       122 VYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqI  201 (289)
                      +|.-.      .||+|.+||.++--++|++++.=+..|.+.-  =....|.+                    .|   |.+
T Consensus         3 LYIYd------HCPfcvrarmi~Gl~nipve~~vL~nDDe~T--p~rmiG~K--------------------qV---PiL   51 (215)
T COG2999           3 LYIYD------HCPFCVRARMIFGLKNIPVELHVLLNDDEET--PIRMIGQK--------------------QV---PIL   51 (215)
T ss_pred             eeEec------cChHHHHHHHHhhccCCChhhheeccCcccC--hhhhhccc--------------------cc---ceE
Confidence            56666      9999999999999999999988777654311  12233433                    34   776


Q ss_pred             EE-CCeEEechHHHHHHHHhCcHHHHhcc
Q 041824          202 FV-KGRYVGGAEEVLRIVEEGWFGELIEG  229 (289)
Q Consensus       202 FI-~G~~IGG~del~~L~E~G~L~~lL~~  229 (289)
                      .- +|++++-.=++.+...+-.=..+|.+
T Consensus        52 ~Kedg~~m~ESlDIV~y~d~~~~~~~lt~   80 (215)
T COG2999          52 QKEDGRAMPESLDIVHYVDELDGKPLLTG   80 (215)
T ss_pred             EccccccchhhhHHHHHHHHhcCchhhcc
Confidence            64 88999887777766544333344433

>cd03005 PDI_a_ERp46 PDIa family, endoplasmic reticulum protein 46 (ERp46) subfamily; ERp46 is an ER-resident protein containing three redox active TRX domains

Probab=81.53  E-value=4.3  Score=30.68  Aligned_cols=36  Identities=19%  Similarity=0.321  Sum_probs=24.2

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC---------CCcEEEEEcCCCh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF---------GVAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~---------gV~y~ErDVs~d~  160 (289)
                      -+|.|+++      +|+.|+.....|+..         .+.+-.+|.+.+.
T Consensus        19 ~lv~f~a~------wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~   63 (102)
T cd03005          19 HFVKFFAP------WCGHCKRLAPTWEQLAKKFNNENPSVKIAKVDCTQHR   63 (102)
T ss_pred             EEEEEECC------CCHHHHHhCHHHHHHHHHHhccCCcEEEEEEECCCCh
Confidence            45666666      999999877666432         3566677776554

Yeast complementation studies show that ERp46 can substitute for protein disulfide isomerase (PDI) function in vivo. It has been detected in many tissues, however, transcript and protein levels do not correlate in all tissues, suggesting regulation at a posttranscriptional level. An identical protein, named endoPDI, has been identified as an endothelial PDI that is highly expressed in the endothelium of tumors and hypoxic lesions. It has a protective effect on cells exposed to hypoxia.

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=81.47  E-value=1.9  Score=32.09  Aligned_cols=37  Identities=24%  Similarity=0.683  Sum_probs=25.2

Q ss_pred             CCcccCCCCcee---------------EeCCCCCCcceeeeccCCCCccccccCCccCcCC
Q 041824          236 KGVCQGCADVRF---------------FPCFRCNGSCKLVINMQPRGKTAALRCPDCNENG  281 (289)
Q Consensus       236 ~~~C~~Cgg~rf---------------vpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENG  281 (289)
                      ...|..|.|.++               .+|+.|+|+-+++ +        ..+|+.|+-+|
T Consensus        15 ~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i-~--------~~~C~~C~G~g   66 (66)
T PF00684_consen   15 PKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII-E--------KDPCKTCKGSG   66 (66)
T ss_dssp             -EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE--T--------SSB-SSSTTSS
T ss_pred             CcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE-C--------CCCCCCCCCcC
Confidence            458999998776               4799999998886 3        35899998654

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>cd02950 TxlA TRX-like protein A (TxlA) family; TxlA was originally isolated from the cyanobacterium Synechococcus

Probab=81.44  E-value=4.7  Score=33.96  Aligned_cols=35  Identities=11%  Similarity=0.202  Sum_probs=24.1

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMD  159 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d  159 (289)
                      -||.|.++      +|+.|+.....|..    +  .+.|..+|++.+
T Consensus        23 vvV~F~A~------WC~~C~~~~p~l~~l~~~~~~~~~~v~v~vd~~   63 (142)
T cd02950          23 TLVEFYAD------WCTVCQEMAPDVAKLKQKYGDQVNFVMLNVDNP   63 (142)
T ss_pred             EEEEEECC------cCHHHHHhHHHHHHHHHHhccCeeEEEEEcCCc
Confidence            35556666      99999988877764    2  356777777643

It is found only in oxygenic photosynthetic organisms. TRX is a small enzyme that participate in redox reactions, via the reversible oxidation of an active site dithiol present in a CXXC motif. Disruption of the txlA gene suggests that the protein is involved in the redox regulation of the structure and function of photosynthetic apparatus. The plant homolog (designated as HCF164) is localized in the chloroplast and is involved in the assembly of the cytochrome b6f complex, which takes a central position in photosynthetic electron transport.

>PRK14285 chaperone protein DnaJ; Provisional

Probab=81.33  E-value=1.3  Score=43.43  Aligned_cols=38  Identities=24%  Similarity=0.690  Sum_probs=29.3

Q ss_pred             CcccCCCCceeE-----------eCCCCCCcceeeeccCCCCccccccCCccCcCCccc
Q 041824          237 GVCQGCADVRFF-----------PCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVL  284 (289)
Q Consensus       237 ~~C~~Cgg~rfv-----------pC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLvr  284 (289)
                      ..|..|.|.+.+           +|..|+|.-++.          ..+|..|+-.|.++
T Consensus       164 ~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~----------~~~C~~C~G~g~v~  212 (365)
T PRK14285        164 SICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKII----------SNPCKSCKGKGSLK  212 (365)
T ss_pred             ccCCCccCceeEEecCceeEEeeecCCCCCccccc----------CCCCCCCCCCCEEe
Confidence            479999997654           899999987663          24799999888763

>PRK14288 chaperone protein DnaJ; Provisional

Probab=81.31  E-value=1.3  Score=43.34  Aligned_cols=50  Identities=26%  Similarity=0.660  Sum_probs=31.2

Q ss_pred             CcccCCCCcee-----EeCCCCCCcceeeeccCCCCccccccCCccCcCCcc---cCCCC
Q 041824          237 GVCQGCADVRF-----FPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       237 ~~C~~Cgg~rf-----vpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLv---rCp~C  288 (289)
                      ..|..|.|.+.     ..|..|+|+-.+......  ......|+.|+-.|.+   .|+.|
T Consensus       141 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~g~--~~~~~~C~~C~G~G~~~~~~C~~C  198 (369)
T PRK14288        141 SVCESCDGTGAKDKALETCKQCNGQGQVFMRQGF--MSFAQTCGACQGKGKIIKTPCQAC  198 (369)
T ss_pred             ccCCCCCCcccCCCCCcCCCCCCCCcEEEEEece--EEEEEecCCCCCCceEccccCccC
Confidence            46888877663     568888888766544311  1124578888777743   46666

>PRK14289 chaperone protein DnaJ; Provisional

Probab=80.97  E-value=1.4  Score=43.33  Aligned_cols=66  Identities=26%  Similarity=0.544  Sum_probs=40.1

Q ss_pred             HHHHhccCCCc---ccCCcccCCCCce------eEeCCCCCCcceeeeccCCC-C-ccccccCCccCcCCcc---cCCCC
Q 041824          223 FGELIEGIPIR---KLKGVCQGCADVR------FFPCFRCNGSCKLVINMQPR-G-KTAALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       223 L~~lL~~~~~~---~~~~~C~~Cgg~r------fvpC~~C~GS~K~~~~~~~~-g-~~~~~rC~~CNENGLv---rCp~C  288 (289)
                      |++++.+....   .....|..|.|.+      ...|..|+|+-+++...... | ......|+.|+-.|-+   +|+.|
T Consensus       138 Lee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C  217 (386)
T PRK14289        138 LKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKC  217 (386)
T ss_pred             HHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCC
Confidence            55555553321   1235788887655      47899999997766543110 1 1124688888888865   67777

>PRK14296 chaperone protein DnaJ; Provisional

Probab=80.71  E-value=1.7  Score=42.76  Aligned_cols=66  Identities=26%  Similarity=0.550  Sum_probs=39.5

Q ss_pred             cHHHHhccCCCc---ccCCcccCCCCcee------EeCCCCCCcceeeeccCCCCcc---ccccCCccCcCCcc---cCC
Q 041824          222 WFGELIEGIPIR---KLKGVCQGCADVRF------FPCFRCNGSCKLVINMQPRGKT---AALRCPDCNENGLV---LCP  286 (289)
Q Consensus       222 ~L~~lL~~~~~~---~~~~~C~~Cgg~rf------vpC~~C~GS~K~~~~~~~~g~~---~~~rC~~CNENGLv---rCp  286 (289)
                      .|++++.+....   .....|..|.|.+.      ..|..|+|+-.++..... |.+   ....|+.|+--|-+   .|+
T Consensus       132 tlee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~-g~~~~q~~~~C~~C~G~G~~~~~~C~  210 (372)
T PRK14296        132 TFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNM-GFFQFQQSAKCNVCNGAGKIIKNKCK  210 (372)
T ss_pred             cHHHhhCCeeEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEec-cceEEEEEecCCCcCCcceeeccccc
Confidence            355555554321   12356888887664      579999999766554321 111   13578888877765   477


Q ss_pred             CC
Q 041824          287 LC  288 (289)
Q Consensus       287 ~C  288 (289)
                      .|
T Consensus       211 ~C  212 (372)
T PRK14296        211 NC  212 (372)
T ss_pred             CC
Confidence            77

>cd02999 PDI_a_ERp44_like PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44

Probab=80.62  E-value=6.3  Score=31.02  Aligned_cols=33  Identities=6%  Similarity=0.064  Sum_probs=24.0

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVS  157 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs  157 (289)
                      -||.|+.+      +|+.|++..-.|+..     ++.+-.+|.+
T Consensus        21 vlV~F~a~------WC~~C~~~~p~l~~la~~~~~~~~~~vd~~   58 (100)
T cd02999          21 TAVLFYAS------WCPFSASFRPHFNALSSMFPQIRHLAIEES   58 (100)
T ss_pred             EEEEEECC------CCHHHHhHhHHHHHHHHHhccCceEEEECC
Confidence            46667777      999999998777543     4666667765

CXXS is still a redox active motif; however, the mixed disulfide formed with the substrate is more stable than those formed by CXXC motif proteins. PDI-related proteins are usually involved in the oxidative protein folding in the ER by acting as catalysts and folding assistants. ERp44 is involved in thiol-mediated retention in the ER.

>PRK14873 primosome assembly protein PriA; Provisional

Probab=80.32  E-value=1.9  Score=45.79  Aligned_cols=46  Identities=28%  Similarity=0.576  Sum_probs=35.0

Q ss_pred             CCcccCCCCceeEeCCCCCCcceeeeccCCCCccccccCCccCcCC-cccCCCCC
Q 041824          236 KGVCQGCADVRFFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENG-LVLCPLCS  289 (289)
Q Consensus       236 ~~~C~~Cgg~rfvpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENG-LvrCp~C~  289 (289)
                      .-.|..||-  -+.|++|+++...+...   +   .++|.+|+-.- --+||.|.
T Consensus       383 ~l~C~~Cg~--~~~C~~C~~~L~~h~~~---~---~l~Ch~CG~~~~p~~Cp~Cg  429 (665)
T PRK14873        383 SLACARCRT--PARCRHCTGPLGLPSAG---G---TPRCRWCGRAAPDWRCPRCG  429 (665)
T ss_pred             eeEhhhCcC--eeECCCCCCceeEecCC---C---eeECCCCcCCCcCccCCCCc
Confidence            358999996  48899999997765432   2   68999997643 45899994

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=80.29  E-value=1.5  Score=42.35  Aligned_cols=53  Identities=25%  Similarity=0.618  Sum_probs=33.6

Q ss_pred             CCcccCCCCce------eEeCCCCCCcceeeeccCCC-C-ccccccCCccCcCCcc---cCCCC
Q 041824          236 KGVCQGCADVR------FFPCFRCNGSCKLVINMQPR-G-KTAALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       236 ~~~C~~Cgg~r------fvpC~~C~GS~K~~~~~~~~-g-~~~~~rC~~CNENGLv---rCp~C  288 (289)
                      ...|..|.|.+      ...|..|+|+-.++...... | ......|+.|+-.|.+   .|+.|
T Consensus       143 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C  206 (354)
T TIGR02349       143 KESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTC  206 (354)
T ss_pred             CCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCC
Confidence            35788887766      56799999987655433110 0 0113578888888865   47777

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK11752 putative S-transferase; Provisional

Probab=80.22  E-value=9  Score=35.36  Aligned_cols=76  Identities=13%  Similarity=0.214  Sum_probs=49.4

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCC--hhHHHHHHHHHcccccccCCCCCcch
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMD--RGFKEELRELMMRRRRRSSSSNNNEE  185 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d--~~~reEL~~llg~~~~~~~~s~~~~~  185 (289)
                      +.+.+.+.+|+.       ..++|.+|+-+|+..      |++|+.+.|...  .....|+.++.-.             
T Consensus        39 ~~~~~~~~Ly~~-------~s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~-------------   98 (264)
T PRK11752         39 PVGKHPLQLYSL-------GTPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPN-------------   98 (264)
T ss_pred             CCCCCCeEEecC-------CCCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCC-------------
Confidence            455667999974       569999999999986      888987776542  1223455544221             


Q ss_pred             hhccCCCCCCCCCCEEEECC----eEEechHHHHHHHH
Q 041824          186 EAESSVQPLPPVLPRVFVKG----RYVGGAEEVLRIVE  219 (289)
Q Consensus       186 ~g~~t~~~tv~~LPqIFI~G----~~IGG~del~~L~E  219 (289)
                             .++   |.+..++    ..|--...|.++.+
T Consensus        99 -------GkV---P~Lv~~dg~~~~~L~ES~AIl~YL~  126 (264)
T PRK11752         99 -------SKI---PALLDRSGNPPIRVFESGAILLYLA  126 (264)
T ss_pred             -------CCC---CEEEeCCCCCCeEEEcHHHHHHHHH
Confidence                   134   9998752    46666666666443

>PRK14280 chaperone protein DnaJ; Provisional

Probab=80.03  E-value=1.6  Score=42.90  Aligned_cols=66  Identities=27%  Similarity=0.612  Sum_probs=39.0

Q ss_pred             HHHHhccCCCc---ccCCcccCCCCce------eEeCCCCCCcceeeeccCCC-C-ccccccCCccCcCCcc---cCCCC
Q 041824          223 FGELIEGIPIR---KLKGVCQGCADVR------FFPCFRCNGSCKLVINMQPR-G-KTAALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       223 L~~lL~~~~~~---~~~~~C~~Cgg~r------fvpC~~C~GS~K~~~~~~~~-g-~~~~~rC~~CNENGLv---rCp~C  288 (289)
                      |++++.+....   .....|..|.|.+      ...|..|+|+-.+....... | ......|+.|+-.|.+   .|+.|
T Consensus       127 Lee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C  206 (376)
T PRK14280        127 FEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTC  206 (376)
T ss_pred             HHHHhCCceeEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCC
Confidence            55555543321   1235788888766      46799999987665432110 1 0124578888888864   57777

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	289
1t1v_A	93	SH3BGRL3, SH3 domain-binding glutamic acid-rich pr	6e-23
1u6t_A	121	SH3 domain-binding glutamic acid-rich-like protein	7e-21
2ct6_A	111	SH3 domain-binding glutamic acid-rich-like protein	2e-18
3rhb_A	113	ATGRXC5, glutaredoxin-C5, chloroplastic; thioredox	2e-07
2khp_A	92	Glutaredoxin; thioredoxin type domain, ssgcid, ele	5e-07
3h8q_A	114	Thioredoxin reductase 3; oxidoreductase, structura	9e-07
2ht9_A	146	Glutaredoxin-2; thioredoxin fold, iron-sulfur clus	1e-06
2cq9_A	130	GLRX2 protein, glutaredoxin 2; glutathione-S-trans	1e-06
1fov_A	82	Glutaredoxin 3, GRX3; active site disulfide, CIS P	2e-06
3qmx_A	99	Glutaredoxin A, glutaredoxin 3; electron transport	2e-06
2e7p_A	116	Glutaredoxin; thioredoxin fold, poplar, electron t	2e-06
3l4n_A	127	Monothiol glutaredoxin-6; C-terminal domain of GRX	4e-06
2hze_A	114	Glutaredoxin-1; thioredoxin fold, arsenic, dimethy	8e-06
3c1r_A	118	Glutaredoxin-1; oxidized form, oxidoreductase, cyt	1e-05
1kte_A	105	Thioltransferase; redox-active center, electron tr	1e-05
2klx_A	89	Glutaredoxin; thioredoxin type domain, ssgcid, ele	2e-05
3ctg_A	129	Glutaredoxin-2; reduced form, electron transport,	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
3msz_A	89	Glutaredoxin 1; alpha-beta sandwich, center for st	1e-04
3ic4_A	92	Glutaredoxin (GRX-1); structural genomics, PSI, MC	5e-04

>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A Length = 93

 Score = 89.5 bits (222), Expect = 6e-23
 Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 21/108 (19%)

Query: 119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSS 178
            + +Y+T++ G R+          +++   +     D+S D   ++E+R L    +    
Sbjct: 3   GLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKA--- 59

Query: 179 SSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGEL 226
                               P++     Y G  E  +  VE+    E 
Sbjct: 60  ------------------TPPQIVNGNHYCGDYELFVEAVEQDTLQEF 89

>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A Length = 121

 Score = 85.1 bits (210), Expect = 7e-21
 Identities = 14/112 (12%), Positives = 37/112 (33%), Gaps = 15/112 (13%)

Query: 120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSS 179
           + +Y  +  G     +  +     +E   +   E+D++ +   ++ +RE +    R +  
Sbjct: 2   IRVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPA-- 59

Query: 180 SNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIP 231
                           P+ P++F + +Y G  +      E       +    
Sbjct: 60  -------------TGYPLPPQIFNESQYRGDYDAFFEARENNAVYAFLGLTA 98

>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 78.1 bits (192), Expect = 2e-18
 Identities = 12/112 (10%), Positives = 36/112 (32%), Gaps = 15/112 (13%)

Query: 120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSS 179
           + ++  +  G     +  +     +E   +   E D++M    ++ + + +   ++ +  
Sbjct: 10  IRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQG 69

Query: 180 SNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIP 231
           +               P+ P++F   RY G  +      E       +    
Sbjct: 70  N---------------PLPPQIFNGDRYCGDYDSFFESKESNTVFSFLGLKS 106

>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A* Length = 113

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 25/105 (23%)

Query: 117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRR 176
           EN VVIY+ T       Y  C   K++ +  GV     ++        +L++++ R   +
Sbjct: 18  ENTVVIYSKTWCS----Y--CTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQ 71

Query: 177 SSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEG 221
            +                   +P VFV G+++GG  + +++  +G
Sbjct: 72  HT-------------------VPNVFVCGKHIGGCTDTVKLNRKG 97

>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis} Length = 92

 Score = 46.0 bits (110), Expect = 5e-07
 Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 29/110 (26%)

Query: 119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSS 178
            V+IYT         Y  C  AK+++   G   +E D S       ELR  M  R  R++
Sbjct: 7   DVIIYTRPGCP----Y--CARAKALLARKGAEFNEIDASAT----PELRAEMQERSGRNT 56

Query: 179 SSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIE 228
                               P++F+   +VGG +++  + +EG    L++
Sbjct: 57  -------------------FPQIFIGSVHVGGCDDLYALEDEGKLDSLLK 87

>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} Length = 114

 Score = 45.7 bits (109), Expect = 9e-07
 Identities = 18/107 (16%), Positives = 39/107 (36%), Gaps = 30/107 (28%)

Query: 117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVA--VSERDVSMDRGFKEELRELMMRRR 174
            ++VVI++ +       +      K +  + GV   V E D   D      ++E++    
Sbjct: 16  RSRVVIFSKSYCP----H--STRVKELFSSLGVECNVLELDQVDDG---ARVQEVLSEIT 66

Query: 175 RRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEG 221
            + +                   +P +FV   +VGG ++  +  + G
Sbjct: 67  NQKT-------------------VPNIFVNKVHVGGCDQTFQAYQSG 94

>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A* Length = 146

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 30/107 (28%)

Query: 117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVA--VSERDVSMDRGFKEELRELMMRRR 174
           +N VVI++ T       Y  C  AK +  +  V   V E D+        + ++ + +  
Sbjct: 48  DNCVVIFSKTSCS----Y--CTMAKKLFHDMNVNYKVVELDLLEYG---NQFQDALYKMT 98

Query: 175 RRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEG 221
              +                   +PR+FV G ++GGA +  R+ +EG
Sbjct: 99  GERT-------------------VPRIFVNGTFIGGATDTHRLHKEG 126

>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 130

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 30/107 (28%)

Query: 117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVA--VSERDVSMDRGFKEELRELMMRRR 174
           +N VVI++ T       Y  C  AK +  +  V   V E D+        + ++ + +  
Sbjct: 26  DNCVVIFSKTSCS----Y--CTMAKKLFHDMNVNYKVVELDLLEYG---NQFQDALYKMT 76

Query: 175 RRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEG 221
              +                   +PR+FV G ++GGA +  R+ +EG
Sbjct: 77  GERT-------------------VPRIFVNGTFIGGATDTHRLHKEG 104

>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A* Length = 82

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 29/110 (26%)

Query: 119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSS 178
            V IYT         Y  C  AK+++ + GV+  E  +  +       RE M++R  R++
Sbjct: 2   NVEIYTKETCP----Y--CHRAKALLSSKGVSFQELPIDGN----AAKREEMIKRSGRTT 51

Query: 179 SSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIE 228
                              +P++F+  +++GG +++  +   G    L++
Sbjct: 52  -------------------VPQIFIDAQHIGGYDDLYALDARGGLDPLLK 82

>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} Length = 99

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 32/113 (28%)

Query: 118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRR--R 175
            K+ IYT +       +  C  A ++++  GV   E  +  D     E RE M  R   +
Sbjct: 16  AKIEIYTWSTCP----F--CMRALALLKRKGVEFQEYCIDGDN----EAREAMAARANGK 65

Query: 176 RSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIE 228
           RS                    LP++F+  +++GG +++  +   G    L+ 
Sbjct: 66  RS--------------------LPQIFIDDQHIGGCDDIYALDGAGKLDPLLH 98

>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A Length = 116

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 33/128 (25%)

Query: 96  VNSAVIKSVLERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGV--AVSE 153
           ++   + + L++ + +        VV+++ T  G    Y  C   K ++   G    V E
Sbjct: 1   MSKQELDAALKKAKELA---SSAPVVVFSKTYCG----Y--CNRVKQLLTQVGASYKVVE 51

Query: 154 RDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEE 213
            D   D     +L+  +     R +                   +P VF+ G+ +GG + 
Sbjct: 52  LDELSD---GSQLQSALAHWTGRGT-------------------VPNVFIGGKQIGGCDT 89

Query: 214 VLRIVEEG 221
           V+   +  
Sbjct: 90  VVEKHQRN 97

>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae} Length = 127

 Score = 44.3 bits (105), Expect = 4e-06
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 35/111 (31%)

Query: 117 ENKVVIYTTTLRGIRKTYEA-CKAAKSVIENFGV-----AVSERDVSMDRGFKEELRELM 170
            + ++I++       K+  +  K  K ++EN         + E D        EEL+E +
Sbjct: 13  LSPIIIFS-------KSTCSYSKGMKELLENEYQFIPNYYIIELDKHGHG---EELQEYI 62

Query: 171 MRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEG 221
                R +                   +P + V G   GG EE+ ++  +G
Sbjct: 63  KLVTGRGT-------------------VPNLLVNGVSRGGNEEIKKLHTQG 94

>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B Length = 114

 Score = 43.0 bits (102), Expect = 8e-06
 Identities = 18/109 (16%), Positives = 35/109 (32%), Gaps = 31/109 (28%)

Query: 117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSM--DRGFKEELRELMMRR- 173
            NKV I+          +  C+ A  ++  F       ++    +   + ELR+   +  
Sbjct: 18  NNKVTIFVKYTCP----F--CRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQIT 71

Query: 174 -RRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEG 221
             +              +V       PR+F     +GG  ++L I    
Sbjct: 72  GGK--------------TV-------PRIFFGKTSIGGYSDLLEIDNMD 99

>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A* Length = 118

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 15/111 (13%), Positives = 41/111 (36%), Gaps = 34/111 (30%)

Query: 117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFG------VAVSERDVSMDRGFKEELRELM 170
           EN++ + + T       Y  C AA + +          V V + +   +     +++  +
Sbjct: 24  ENEIFVASKTYCP----Y--CHAALNTLFEKLKVPRSKVLVLQLNDMKEG---ADIQAAL 74

Query: 171 MRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEG 221
                + +                   +P +++ G+++GG +++  + E G
Sbjct: 75  YEINGQRT-------------------VPNIYINGKHIGGNDDLQELRETG 106

>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A* Length = 105

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 13/112 (11%), Positives = 35/112 (31%), Gaps = 37/112 (33%)

Query: 117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFG-----VAVSERDVSMDRGFKEELRELMM 171
             KVV++          +  C+  + ++         +   +   + D        +  +
Sbjct: 11  PGKVVVFIKPTCP----F--CRKTQELLSQLPFKEGLLEFVDITATSD----TNEIQDYL 60

Query: 172 RRR--RRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEG 221
           ++    R+                    +PRVF+    +GG  ++  + + G
Sbjct: 61  QQLTGART--------------------VPRVFIGKECIGGCTDLESMHKRG 92

>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae} Length = 89

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 21/106 (19%), Positives = 44/106 (41%), Gaps = 34/106 (32%)

Query: 118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRR--R 175
            ++++YT         Y  CK A+ +++  GV  ++ D S        LR+ M++R   R
Sbjct: 6   KEIILYTRPNCP----Y--CKRARDLLDKKGVKYTDIDAS------TSLRQEMVQRANGR 53

Query: 176 RSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEG 221
            +                     P++F+   +VGG +++  +  +G
Sbjct: 54  NT--------------------FPQIFIGDYHVGGCDDLYALENKG 79

>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A* Length = 129

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 23/158 (14%), Positives = 57/158 (36%), Gaps = 37/158 (23%)

Query: 79  LGESDNNSLRKAKENPSVNSAVIKSVLERFERICPPDGENKVVIYTTTLRGIRKTYEACK 138
           +G S ++    +   P  +  V +  +   + +    G+ +V +   T       Y  CK
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMVSQETVAHVKDLI---GQKEVFVAAKTYCP----Y--CK 51

Query: 139 AAKSVIENFG------VAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQ 192
           A  S +            V E D   +     E+++ +     + +              
Sbjct: 52  ATLSTLFQELNVPKSKALVLELDEMSNG---SEIQDALEEISGQKT-------------- 94

Query: 193 PLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGI 230
                +P V++ G+++GG  ++  + + G   E+++ +
Sbjct: 95  -----VPNVYINGKHIGGNSDLETLKKNGKLAEILKPV 127

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 2e-05
 Identities = 25/220 (11%), Positives = 61/220 (27%), Gaps = 74/220 (33%)

Query: 7   NLLNQEDELSQL----------GSSALSQHIVSLTSTTYGLL-------NVDPPATTPPT 49
           +++  +D +S                + + +  +    Y  L          P   T   
Sbjct: 53  HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY 112

Query: 50  RPQR---FTLGSILPGEPV-RAEVINSWELMSGLGESDNNSLRKAKENPSVNSAVI---- 101
             QR   +    +     V R +     +L          +L + +   +V   +I    
Sbjct: 113 IEQRDRLYNDNQVFAKYNVSRLQPY--LKL--------RQALLELRPAKNV---LIDGVL 159

Query: 102 ---KSVL-------ERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENF---- 147
              K+ +        + +            I+   L+        C + ++V+E      
Sbjct: 160 GSGKTWVALDVCLSYKVQC-KMDFK-----IFWLNLK-------NCNSPETVLEMLQKLL 206

Query: 148 ------GVAVSERDVSMDRGF---KEELRELMMRRRRRSS 178
                   + S+   ++       + ELR L+  +   + 
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246

>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A* Length = 89

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 19/92 (20%), Positives = 28/92 (30%), Gaps = 22/92 (23%)

Query: 119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSS 178
           KV IYT         Y  C  AK   E   +A  E  +          R        +S 
Sbjct: 5   KVKIYTRNGCP----Y--CVWAKQWFEENNIAFDETIIDDY-----AQRSKFYDEMNQSG 53

Query: 179 SSNNNEEEAESSVQPLPPVLPRVFVKGRYVGG 210
                      +V       P++F+   ++GG
Sbjct: 54  KVIFPIS----TV-------PQIFIDDEHIGG 74

>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus} Length = 92

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 24/95 (25%)

Query: 119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSS 178
           +V++Y  +       +  CK     ++  GV      +    G   E R+ ++ +    S
Sbjct: 13  EVLMYGLSTCP----H--CKRTLEFLKREGVDFEVIWIDKLEG---EERKKVIEKVHSIS 63

Query: 179 SSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEE 213
            S         SV       P V    ++V G  E
Sbjct: 64  GS--------YSV-------PVVVKGDKHVLGYNE 83

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	289
3zyw_A	111	Glutaredoxin-3; metal binding protein; 1.84A {Homo	99.88
2wul_A	118	Glutaredoxin related protein 5; chromosome 14 open	99.87
1u6t_A	121	SH3 domain-binding glutamic acid-rich-like protein	99.87
1t1v_A	93	SH3BGRL3, SH3 domain-binding glutamic acid-rich pr	99.87
3ipz_A	109	Monothiol glutaredoxin-S14, chloroplastic; electro	99.86
2ct6_A	111	SH3 domain-binding glutamic acid-rich-like protein	99.85
3gx8_A	121	Monothiol glutaredoxin-5, mitochondrial; TRX fold,	99.85
2wem_A	118	Glutaredoxin-related protein 5; chromosome 14 open	99.85
3qmx_A	99	Glutaredoxin A, glutaredoxin 3; electron transport	99.83
3l4n_A	127	Monothiol glutaredoxin-6; C-terminal domain of GRX	99.83
2wci_A	135	Glutaredoxin-4; redox-active center, iron-sulfur c	99.83
1wik_A	109	Thioredoxin-like protein 2; picot homology 2 domai	99.83
2yan_A	105	Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {H	99.82
3h8q_A	114	Thioredoxin reductase 3; oxidoreductase, structura	99.81
3rhb_A	113	ATGRXC5, glutaredoxin-C5, chloroplastic; thioredox	99.8
3ctg_A	129	Glutaredoxin-2; reduced form, electron transport,	99.76
2khp_A	92	Glutaredoxin; thioredoxin type domain, ssgcid, ele	99.75
2klx_A	89	Glutaredoxin; thioredoxin type domain, ssgcid, ele	99.74
1fov_A	82	Glutaredoxin 3, GRX3; active site disulfide, CIS P	99.73
3c1r_A	118	Glutaredoxin-1; oxidized form, oxidoreductase, cyt	99.73
1aba_A	87	Glutaredoxin; electron transport; HET: MES; 1.45A	99.71
1kte_A	105	Thioltransferase; redox-active center, electron tr	99.71
2hze_A	114	Glutaredoxin-1; thioredoxin fold, arsenic, dimethy	99.68
2jad_A	362	Yellow fluorescent protein glutaredoxin fusion pro	99.66
2cq9_A	130	GLRX2 protein, glutaredoxin 2; glutathione-S-trans	99.63
2ht9_A	146	Glutaredoxin-2; thioredoxin fold, iron-sulfur clus	99.62
2lqo_A	92	Putative glutaredoxin RV3198.1/MT3292; TRX fold, o	99.61
3msz_A	89	Glutaredoxin 1; alpha-beta sandwich, center for st	99.61
1ego_A	85	Glutaredoxin; electron transport; NMR {Escherichia	99.46
3nzn_A	103	Glutaredoxin; structural genomics, PSI2, MCSG, pro	99.44
2x8g_A	598	Thioredoxin glutathione reductase; redox-active ce	99.44
3ic4_A	92	Glutaredoxin (GRX-1); structural genomics, PSI, MC	99.43
1nm3_A	241	Protein HI0572; hybrid, peroxiredoxin, glutaredoxi	99.43
2e7p_A	116	Glutaredoxin; thioredoxin fold, poplar, electron t	99.3
1h75_A	81	Glutaredoxin-like protein NRDH; electron transport	99.3
1r7h_A	75	NRDH-redoxin; thioredoxin, glutaredoxin, redox pro	99.29
2k8s_A	80	Thioredoxin; dimer, structural genomics, PSI-2, pr	98.96
1wjk_A	100	C330018D20RIK protein; glutaredoxin, thioredoxin f	98.94
1ttz_A	87	Conserved hypothetical protein; structural genomic	98.8
2fgx_A	107	Putative thioredoxin; NET3, NESG, GFT-glutaredoxin	98.76
1z3e_A	132	Regulatory protein SPX; bacterial transcription re	98.66
1rw1_A	114	Conserved hypothetical protein YFFB; thioredoxin f	98.66
2kok_A	120	Arsenate reductase; brucellosis, zoonotic, oxidore	98.62
2axo_A	270	Hypothetical protein ATU2684; alpha beta protein.,	98.35
3l78_A	120	Regulatory protein SPX; transcription, transcripti	98.27
3rdw_A	121	Putative arsenate reductase; structural genomics,	98.26
1s3c_A	141	Arsenate reductase; ARSC, arsenite, oxidoreductase	98.24
3gkx_A	120	Putative ARSC family related protein; ARSC family	98.21
3fz4_A	120	Putative arsenate reductase; APC61768, structural	98.17
3f0i_A	119	Arsenate reductase; structural genomics, IDP01300,	97.97
1nho_A	85	Probable thioredoxin; beta sheet, alpha helix, oxi	97.8
3kp8_A	106	Vkorc1/thioredoxin domain protein; blood coagulati	97.64
1fo5_A	85	Thioredoxin; disulfide oxidoreductase, structural	97.56
3ir4_A	218	Glutaredoxin 2; glutathione, IDP00895, structural	97.5
3kp9_A	291	Vkorc1/thioredoxin domain protein; warfarin, disul	97.47
2ahe_A	267	Chloride intracellular channel protein 4; glutathi	97.35
2r4v_A	247	XAP121, chloride intracellular channel protein 2;	97.29
2cz2_A	223	Maleylacetoacetate isomerase; structural genomics,	97.24
3vln_A	241	GSTO-1, glutathione S-transferase omega-1; GST fol	97.22
4hi7_A	228	GI20122; GST, glutathione S-transferase, enzyme fu	97.16
1e6b_A	221	Glutathione S-transferase; 1.65A {Arabidopsis thal	97.12
4hoj_A	210	REGF protein; GST, glutathione S-transferase, enzy	97.1
3qav_A	243	RHO-class glutathione S-transferase; cytosol; 2.10	97.1
3rbt_A	246	Glutathione transferase O1; glutathione S-transfer	97.09
3fy7_A	250	Chloride intracellular channel protein 3; GST, glu	97.09
1oyj_A	231	Glutathione S-transferase; herbicide detoxificatio	97.09
2hls_A	243	Protein disulfide oxidoreductase; thioredoxin fold	97.07
1hyu_A	521	AHPF, alkyl hydroperoxide reductase subunit F; thi	97.07
2l6c_A	110	Thioredoxin; oxidoreductase; NMR {Desulfovibrio vu	97.03
4g10_A	265	Glutathione S-transferase homolog; thioredoxin fol	97.03
3lyp_A	215	Stringent starvation protein A; structural genomic	97.02
1yy7_A	213	SSPA, stringent starvation protein A; GST fold, tr	97.0
2a2r_A	210	Glutathione S-transferase P; detoxification, nitri	97.0
2v6k_A	214	Maleylpyruvate isomerase; glutathione-S-transferas	96.97
3q18_A	239	GSTO-2, glutathione S-transferase omega-2; glutath	96.96
1zl9_A	207	GST class-sigma, glutathione S-transferase 5; glut	96.95
3lyk_A	216	Stringent starvation protein A homolog; structural	96.93
3n5o_A	235	Glutathione transferase; seattle structural genomi	96.93
2imi_A	221	Epsilon-class glutathione S-transferase; HET: GSH;	96.91
1okt_A	211	Glutathione S-transferase; GST; 1.9A {Plasmodium f	96.91
1k0m_A	241	CLIC1, NCC27, chloride intracellular channel prote	96.89
1pn9_A	209	GST class-delta, glutathione S-transferase 1-6; pr	96.87
3ay8_A	216	Glutathione S-transferase; GST fold, GST binding,	96.87
1gwc_A	230	Glutathione S-transferase TSI-1; herbicide detoxif	96.87
1yq1_A	208	Glutathione S-transferase; nematoda, structural ge	96.87
1axd_A	209	Glutathione S-transferase I; transferase, herbicid	96.86
2vo4_A	219	2,4-D inducible glutathione S-transferase; herbici	96.86
2on5_A	206	Nagst-2, Na glutathione S-transferase 2; hookworm;	96.86
1v2a_A	210	Glutathione transferase GST1-6; glutathione S-tran	96.83
2ws2_A	204	NU-class GST, glutathione S-transferase; parasite,	96.83
2on7_A	206	Nagst-1, Na glutathione S-transferase 1; hookworm;	96.82
1gnw_A	211	Glutathione S-transferase; herbicide detoxificatio	96.81
1tw9_A	206	Glutathione S-transferase 2; 1.71A {Heligmosomoide	96.79
1aw9_A	216	Glutathione S-transferase III; herbicide detoxific	96.79
2cvd_A	198	Glutathione-requiring prostaglandin D synthase; gl	96.75
3lxz_A	229	Glutathione S-transferase family protein; structur	96.72
3m3m_A	210	Glutathione S-transferase; PSI-II, structural geno	96.72
1w4v_A	119	Thioredoxin, mitochondrial; antioxidant enzyme, mi	96.72
2c3n_A	247	Glutathione S-transferase theta 1; glutathione tra	96.72
3gyk_A	175	27KDA outer membrane protein; APC61738.2, siliciba	96.71
1syr_A	112	Thioredoxin; SGPP, structural genomics, PSI, prote	96.71
2e0q_A	104	Thioredoxin; electron transport; 1.49A {Sulfolobus	96.71
3bby_A	215	Uncharacterized GST-like protein YFCF; NP_416804.1	96.69
2yzu_A	109	Thioredoxin; redox protein, electron transport, st	96.65
1z9h_A	290	Membrane-associated prostaglandin E synthase-2; me	96.65
4dej_A	231	Glutathione S-transferase related protein; transfe	96.65
4iel_A	229	Glutathione S-transferase, N-terminal domain PROT;	96.62
3m8n_A	225	Possible glutathione S-transferase; PSI-II, struct	96.6
1thx_A	115	Thioredoxin, thioredoxin 2; oxido-reductase, elect	96.6
3ic8_A	310	Uncharacterized GST-like proteinprotein; glutathio	96.58
1ljr_A	244	HGST T2-2, glutathione S-transferase; HET: GSH; 3.	96.58
1k0d_A	260	URE2 protein; nitrate assimilation, structural gen	96.57
4ags_A	471	Thiol-dependent reductase 1; transferase, leishman	96.56
1t3b_A	211	Thiol:disulfide interchange protein DSBC; oxidored	96.54
2i4a_A	107	Thioredoxin; acidophIle, disulfide exchange, oxido	96.54
3f6d_A	219	Adgstd4-4, glutathione transferase GST1-4; HET: GT	96.54
1r5a_A	218	Glutathione transferase; glutathione S-transferase	96.53
2hnl_A	225	Glutathione S-transferase 1; prostaglandin synthas	96.53
2gsq_A	202	Squid GST, glutathione S-transferase; squid digest	96.52
1dby_A	107	Chloroplast thioredoxin M CH2; thioredoxin CH2, ch	96.52
3ibh_A	233	GST-II, saccharomyces cerevisiae GTT2; glutathione	96.51
1fb6_A	105	Thioredoxin M; electron transport; 2.10A {Spinacia	96.5
1ep7_A	112	Thioredoxin CH1, H-type; electron transport; 2.10A	96.5
3m9j_A	105	Thioredoxin; oxidoreductase; 1.10A {Homo sapiens}	96.49
3m0f_A	213	Uncharacterized protein GST_N; PSI-2, NYSGXRC, glu	96.46
3gnj_A	111	Thioredoxin domain protein; APC92103, STR genomics	96.45
2vm1_A	118	Thioredoxin, thioredoxin H isoform 1.; oxidoreduct	96.44
2vim_A	104	Thioredoxin, TRX; thioredoxin fold, oxidoreductase	96.43
4f03_A	253	Glutathione transferase; GST fold; 1.80A {Phaneroc	96.4
3niv_A	222	Glutathione S-transferase; structural genomics, PS	96.37
3ein_A	209	GST class-theta, glutathione S-transferase 1-1; de	96.36
3ubk_A	242	Glutathione transferase; GSH binding; 1.95A {Lepto	96.35
2oe3_A	114	Thioredoxin-3; electron transport, alpha/beta sand	96.34
1xfl_A	124	Thioredoxin H1; AT3G51030, structural genomics, pr	96.33
1nhy_A	219	EF-1-gamma 1, elongation factor 1-gamma 1; protein	96.33
4hz2_A	230	Glutathione S-transferase domain; glutathione,enzy	96.33
2wb9_A	211	Glutathione transferase sigma class; thioredoxin f	96.3
2xc2_A	117	Thioredoxinn; oxidoreductase, protein disulfide re	96.28
1eej_A	216	Thiol:disulfide interchange protein; oxidoreductas	96.27
1vf1_A	229	Glutathione S-transferase 3; detoxification; HET:	96.24
1k3y_A	221	GSTA1-1, glutathione S-transferase A1; S-hexyl glu	96.2
2trx_A	108	Thioredoxin; electron transport; 1.68A {Escherichi	96.2
3vk9_A	216	Glutathione S-transferase delta; glutathione bindi	96.19
4ags_A	471	Thiol-dependent reductase 1; transferase, leishman	96.19
3f3q_A	109	Thioredoxin-1; His TAG, electron transport, cytopl	96.17
1m0u_A	249	GST2 gene product; flight muscle protein, sigma, t	96.15
3cxg_A	133	Putative thioredoxin; malaria, structural GEN oxid	96.13
3r2q_A	202	Uncharacterized GST-like protein YIBF; transferase	96.11
4glt_A	225	Glutathione S-transferase-like protein; structural	96.11
2vlu_A	122	Thioredoxin, thioredoxin H isoform 2.; oxidoreduct	96.09
2l57_A	126	Uncharacterized protein; structural genomics, unkn	96.08
3ik7_A	222	Glutathione S-transferase A4; human GST A4-4, enzy	96.08
1ti3_A	113	Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Popul	96.05
2yv7_A	260	CG10997-PA, LD46306P, CLIC; dmclic, chloride ION c	96.05
3iv4_A	112	Putative oxidoreductase; APC23140, meticillin-resi	96.05
1faa_A	124	Thioredoxin F; electron transport; 1.85A {Spinacia	96.03
2wz9_A	153	Glutaredoxin-3; protein binding; 1.55A {Homo sapie	96.03
3d6i_A	112	Monothiol glutaredoxin-3; thioredoxin-like, electr	96.02
1z6m_A	175	Conserved hypothetical protein; structural genomic	95.99
3qfa_C	116	Thioredoxin; protein-protein complex, rossmann fol	95.99
1ilo_A	77	Conserved hypothetical protein MTH895; beta-alpha-	95.99
1nsw_A	105	Thioredoxin, TRX; thermostability, electron transp	95.98
3die_A	106	Thioredoxin, TRX; electron transport, SWAP domain,	95.94
1r26_A	125	Thioredoxin; redox-active disulfide, electron tran	95.93
1zma_A	118	Bacterocin transport accessory protein; alpha-beta	95.92
1tu7_A	208	Glutathione S-transferase 2; HET: GSH; 1.50A {Onch	95.89
3gtu_B	224	Glutathione S-transferase; conjugation, detoxifica	95.88
1v98_A	140	Thioredoxin; oxidoreductase, structural genomics,	95.85
4euy_A	105	Uncharacterized protein; structural genomics, PSI-	95.85
1gh2_A	107	Thioredoxin-like protein; redox-active center, ele	95.82
3aps_A	122	DNAJ homolog subfamily C member 10; thioredoxin fo	95.82
1xwb_A	106	Thioredoxin; dimerization, redox regulation, THI X	95.78
2i1u_A	121	Thioredoxin, TRX, MPT46; redox protein, electron t	95.76
3uvt_A	111	Thioredoxin domain-containing protein 5; thioredox	95.73
3hz4_A	140	Thioredoxin; NYSGXRC, PSI-II, reduced form, protei	95.7
2f51_A	118	Thioredoxin; electron transport; 1.90A {Trichomona	95.68
1zzo_A	136	RV1677; thioredoxin fold, structural genomics, PSI	95.68
3tco_A	109	Thioredoxin (TRXA-1); disulfide oxidoreductase, ox	95.67
3tou_A	226	Glutathione S-transferase protein; GSH binding sit	95.67
2j23_A	121	Thioredoxin; immune protein, autoreactivity, cross	95.65
1t00_A	112	Thioredoxin, TRX; redox regulation, multifunction	95.63
1x5e_A	126	Thioredoxin domain containing protein 1; TMX, TXND	95.58
2o8v_B	128	Thioredoxin 1; disulfide crosslinked complex, oxid	95.58
1b48_A	221	GST, mgsta4-4, protein (glutathione S-transferase)	95.56
2yv9_A	291	Chloride intracellular channel EXC-4; chloride ION	95.55
3cbu_A	214	Probable GST-related protein; thioredoxin fold, GS	95.55
2ppt_A	155	Thioredoxin-2; thiredoxin, zinc finger, oxidoreduc	95.46
2pu9_C	111	TRX-F, thioredoxin F-type, chloroplast; protein-pr	95.41
2ycd_A	230	Glutathione S-transferase; SOIL bacteria, herbicid	95.4
3p2a_A	148	Thioredoxin 2, putative thioredoxin-like protein;	95.28
3d22_A	139	TRXH4, thioredoxin H-type; electron transport, cyt	95.28
2voc_A	112	Thioredoxin; electron transport, homodimer, disulf	95.24
1mek_A	120	Protein disulfide isomerase; electron transport, r	95.2
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	95.18
4ikh_A	244	Glutathione S-transferase; enzyme function initiat	95.17
2ju5_A	154	Thioredoxin disulfide isomerase; protein, oxidored	95.05
4hz4_A	217	Glutathione-S-transferase; enzyme function initiat	95.04
2l5l_A	136	Thioredoxin; structural genomics, electron transpo	94.94
1x5d_A	133	Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC	94.94
3ul3_B	128	Thioredoxin, thioredoxin-2; PTEX, oxidoreductase;	94.88
1gsu_A	219	GST, CGSTM1-1, class-MU glutathione S-transferase;	94.87
2c4j_A	218	Glutathione S-transferase MU 2; glutathione transf	94.72
1oe8_A	211	Glutathione S-transferase; schistosomiasis, detoxi	94.68
2fhe_A	216	GST, glutathione S-transferase; transferase-substr	94.68
2dj1_A	140	Protein disulfide-isomerase A4; protein ERP-72, ER	94.62
4exj_A	238	Uncharacterized protein; transferase-like protein,	94.54
2yj7_A	106	LPBCA thioredoxin; oxidoreductase; 1.65A {Syntheti	93.53
3iso_A	218	Putative glutathione transferase; GST; HET: GSH; 1	94.49
2ywm_A	229	Glutaredoxin-like protein; redox protein, structur	94.47
3fk8_A	133	Disulphide isomerase; APC61824.1, xylella fastidio	94.43
1wou_A	123	Thioredoxin -related protein, 14 kDa; electron tra	94.42
3hxs_A	141	Thioredoxin, TRXP; electron transport; 2.00A {Bact	94.37
3c8e_A	288	YGHU, glutathione S-transferase homologue; glutath	94.33
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	94.31
1v58_A	241	Thiol:disulfide interchange protein DSBG; reduced	94.3
2x64_A	207	Glutathione-S-transferase; detoxification enzyme;	94.28
3gx0_A	215	GST-like protein YFCG; transferase, glutathione, g	94.23
3lsz_A	225	Glutathione S-transferase; xenobiotic, biodegradat	94.17
3emx_A	135	Thioredoxin; structural genomics, oxidoreductase,	94.15
1kng_A	156	Thiol:disulfide interchange protein CYCY; thioredo	94.14
1dug_A	234	Chimera of glutathione S-transferase-synthetic lin	94.09
4id0_A	214	Glutathione S-transferase-like protein YIBF; GST,	93.97
3zzx_A	105	Thioredoxin; oxidoreductase; 1.88A {Litopenaeus va	93.93
3h93_A	192	Thiol:disulfide interchange protein DSBA; disulfid	93.92
2kuc_A	130	Putative disulphide-isomerase; structural genomics	93.79
3hd5_A	195	Thiol:disulfide interchange protein DSBA; protein	93.67
2f9s_A	151	Thiol-disulfide oxidoreductase RESA; thioredoxin-l	93.66
1lu4_A	136	Soluble secreted antigen MPT53; thioredoxin-like f	93.59
3gv1_A	147	Disulfide interchange protein; neisseria gonorrhoe	93.46
2fwh_A	134	Thiol:disulfide interchange protein DSBD; thioredo	93.42
3uar_A	227	Glutathione S-transferase; GSH binding site; HET:	93.38
4ecj_A	244	Glutathione S-transferase; transferase-like protei	93.3
3ha9_A	165	Uncharacterized thioredoxin-like protein; PSI, MCS	93.2
3or5_A	165	Thiol:disulfide interchange protein, thioredoxin p	93.09
2rem_A	193	Disulfide oxidoreductase; disulfide oxidoreductase	93.07
3eur_A	142	Uncharacterized protein; PSI2,MCSG, conserved prot	92.76
1n2a_A	201	Glutathione S-transferase; HET: GTS; 1.90A {Escher	92.57
2znm_A	195	Thiol:disulfide interchange protein DSBA; thioredo	92.54
2pvq_A	201	Glutathione S-transferase; xenobiotics detoxificat	92.53
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	92.34
3h79_A	127	Thioredoxin-like protein; thioredoxin fold, cataly	92.23
3ewl_A	142	Uncharacterized conserved protein BF1870; alpha-be	92.23
2dml_A	130	Protein disulfide-isomerase A6; thioredoxin domain	92.08
1qgv_A	142	Spliceosomal protein U5-15KD; snRNP, thioredoxin,	91.97
1pmt_A	203	PMGST, GST B1-1, glutathione transferase; glutathi	91.83
1a8l_A	226	Protein disulfide oxidoreductase; PDI, thioredoxin	91.51
2lrn_A	152	Thiol:disulfide interchange protein; structural ge	91.49
2dj3_A	133	Protein disulfide-isomerase A4; protein ERP-72, ER	91.46
2dsa_A	203	Glutathione S-transferase; HET: GSH HPX; 2.10A {Bu	91.41
4gf0_A	215	Glutathione S-transferase; GST, enzyme function in	91.37
3ppu_A	352	Glutathione-S-transferase; GST fold; HET: GSH; 2.3	91.25
3gix_A	149	Thioredoxin-like protein 4B; PRE-mRNA splicing, TX	91.1
2lst_A	130	Thioredoxin; structural genomics, NEW YORK structu	90.42
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	91.03
1o73_A	144	Tryparedoxin; electron transport, trypanosomatid,	90.86
1f2e_A	201	Glutathione S-transferase; GST complexed with glut	90.83
2lja_A	152	Putative thiol-disulfide oxidoreductase; structura	90.42
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	90.26
3dxb_A	222	Thioredoxin N-terminally fused to PUF60(UHM); spli	89.96
2dj0_A	137	Thioredoxin-related transmembrane protein 2; AVLA2	89.67
2b1k_A	168	Thiol:disulfide interchange protein DSBE; C-termin	89.61
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	89.53
3kgk_A	110	Arsenical resistance operon trans-acting represso;	89.3
2av4_A	160	Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECI	89.29
2b5x_A	148	YKUV protein, TRXY; thioredoxin-like, oxidoreducta	88.99
1o8x_A	146	Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrot	88.98
1wmj_A	130	Thioredoxin H-type; structural genomics, program f	88.77
2l5o_A	153	Putative thioredoxin; structural genomics, unknown	88.5
3ia1_A	154	THIO-disulfide isomerase/thioredoxin; oxidoreducta	88.4
1xg8_A	111	Hypothetical protein SA0798; structural genomics,	88.2
3h1n_A	252	Probable glutathione S-transferase; APC84167, bord	88.03
3fkf_A	148	Thiol-disulfide oxidoreductase; structural genomic	87.73
3hcz_A	148	Possible thiol-disulfide isomerase; APC61559.2, cy	87.66
1i5g_A	144	Tryparedoxin II; electron transport; HET: TS5; 1.4	87.44
3idv_A	241	Protein disulfide-isomerase A4; thioredoxin-like f	87.21
3kcm_A	154	Thioredoxin family protein; SGX, thioredoxin prote	87.13
3m1g_A	362	Putative glutathione S-transferase; ECM4-like subf	86.96
1a8l_A	226	Protein disulfide oxidoreductase; PDI, thioredoxin	86.9
2djj_A	121	PDI, protein disulfide-isomerase; thioredoxin fold	86.76
3qou_A	287	Protein YBBN; thioredoxin-like fold, tetratricopep	86.67
3gl3_A	152	Putative thiol:disulfide interchange protein DSBE;	86.3
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	86.17
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	85.26
3s9f_A	165	Tryparedoxin; thioredoxin fold, disulfide reductas	85.08
1b8x_A	280	Protein (AML-1B); nuclear matrix targeting signal	85.08
1z6n_A	167	Hypothetical protein PA1234; alpha-beta-alpha sand	84.72
3ktb_A	106	Arsenical resistance operon trans-acting represso;	84.08
3lwa_A	183	Secreted thiol-disulfide isomerase; thioredoxin, P	83.4
2dbc_A	135	PDCL2, unnamed protein product; phosducin-like pro	83.27
3kh7_A	176	Thiol:disulfide interchange protein DSBE; TRX-like	83.09
2trc_P	217	Phosducin, MEKA, PP33; transducin, beta-gamma, sig	82.98
3ph9_A	151	Anterior gradient protein 3 homolog; thioredoxin f	82.89
3idv_A	241	Protein disulfide-isomerase A4; thioredoxin-like f	82.51
3q6o_A	244	Sulfhydryl oxidase 1; protein disulfide isomerase,	81.09
1bg5_A	254	MAB, fusion protein of alpha-Na,K-ATPase with glut	81.07

>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}

Probab=99.88  E-value=3.1e-22  Score=160.87  Aligned_cols=93  Identities=11%  Similarity=0.200  Sum_probs=81.5

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      ..++||||++.... ..+|++|.+||++|+.+||+|+++||..|++.+++|++++|..                    ++
T Consensus        14 ~~~~Vvlf~kg~~~-~~~Cp~C~~ak~~L~~~gi~y~~~di~~d~~~~~~l~~~~g~~--------------------tv   72 (111)
T 3zyw_A           14 HAAPCMLFMKGTPQ-EPRCGFSKQMVEILHKHNIQFSSFDIFSDEEVRQGLKAYSSWP--------------------TY   72 (111)
T ss_dssp             TSSSEEEEESBCSS-SBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTCC--------------------SS
T ss_pred             hcCCEEEEEecCCC-CCcchhHHHHHHHHHHcCCCeEEEECcCCHHHHHHHHHHHCCC--------------------CC
Confidence            46789999991110 1199999999999999999999999999999999999987643                    55


Q ss_pred             CCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCCC
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPI  232 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~  232 (289)
                         |+|||||++|||+|++.+|+++|+|.++|+.++.
T Consensus        73 ---P~ifi~g~~iGG~d~l~~l~~~G~L~~~L~~a~~  106 (111)
T 3zyw_A           73 ---PQLYVSGELIGGLDIIKELEASEELDTICPKAAE  106 (111)
T ss_dssp             ---CEEEETTEEEECHHHHHHHHHTTCHHHHSCCCCC
T ss_pred             ---CEEEECCEEEecHHHHHHHHHCCCHHHHHHhCcc
Confidence               9999999999999999999999999999988764

>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}

Probab=99.87  E-value=3.8e-22  Score=164.31  Aligned_cols=93  Identities=20%  Similarity=0.395  Sum_probs=81.7

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCC-cEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGV-AVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV-~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      +++||||+++.+ ...+|+||.+|+++|+.+|| +|.++||..|++.+++|++++|.                    +|+
T Consensus        19 ~~~VvvF~Kgt~-~~P~C~fc~~ak~lL~~~gv~~~~~~~v~~~~~~r~~l~~~sg~--------------------~Tv   77 (118)
T 2wul_A           19 KDKVVVFLKGTP-EQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYSNW--------------------PTI   77 (118)
T ss_dssp             HSSEEEEESBCS-SSBSSHHHHHHHHHHHHTTCCSCEEEETTSCHHHHHHHHHHHTC--------------------CSS
T ss_pred             cCCEEEEEcCCC-CCCCCHHHHHHHHHHHHhCCcCeEeecccCCHHHHHHHHHhccC--------------------CCC
Confidence            578999999721 12259999999999999999 69999999999999999999874                    366


Q ss_pred             CCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCCCc
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIR  233 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~~  233 (289)
                         |||||||+||||+|+|.+|+++|+|.++|+.+...
T Consensus        78 ---PqIFI~g~~IGG~Ddl~~l~~~GeL~~lL~~~Gi~  112 (118)
T 2wul_A           78 ---PQVYLNGEFVGGCDILLQMHQNGDLVEELKKLGIH  112 (118)
T ss_dssp             ---CEEEETTEEEECHHHHHHHHHHTHHHHHHHHTTCC
T ss_pred             ---CeEeECCEEECCHHHHHHHHHCCCHHHHHHHcCCc
Confidence               99999999999999999999999999999876543

>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A

Probab=99.87  E-value=3.1e-22  Score=165.85  Aligned_cols=99  Identities=15%  Similarity=0.267  Sum_probs=79.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      |+||+|++.+.+++...|.+||+||+++||+|+|+||++|+++|+||.++++..+        .+.    .|..++   |
T Consensus         2 V~vYtt~~c~~c~~kk~c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~~~~~--------~~~----~G~~tv---P   66 (121)
T 1u6t_A            2 IRVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENS--------RPA----TGYPLP---P   66 (121)
T ss_dssp             EEEEECTTCSCHHHHHHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHSCGGG--------SCS----SSSCCS---C
T ss_pred             EEEEecCCCCCccchHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhccccc--------ccc----CCCcCC---C
Confidence            8999999444443444448999999999999999999999999999999984220        000    022355   9


Q ss_pred             EEEECCeEEechHHHHHHHHhCcHHHHhccCCCc
Q 041824          200 RVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIR  233 (289)
Q Consensus       200 qIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~~  233 (289)
                      ||||||+||||+|+|.+|++.|+|+++|...+..
T Consensus        67 QIFi~~~~iGG~Dd~~~l~e~g~L~~lL~~~~~~  100 (121)
T 1u6t_A           67 QIFNESQYRGDYDAFFEARENNAVYAFLGLTAPP  100 (121)
T ss_dssp             EEEETTEEEEEHHHHHHHHHTTCHHHHHTCCCCT
T ss_pred             EEEECCEEEechHHHHHhhhhChHHHHHcCCCCC
Confidence            9999999999999999999999999999876653

>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A

Probab=99.87  E-value=6.1e-22  Score=152.48  Aligned_cols=86  Identities=19%  Similarity=0.344  Sum_probs=77.8

Q ss_pred             CCcEEEEEecCCCCCCCCHHH------HHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccC
Q 041824          117 ENKVVIYTTTLRGIRKTYEAC------KAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESS  190 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C------~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t  190 (289)
                      +.+|+||+++      +|++|      .+|+++|+.+||+|+++||+.+++.+++|++++|..                 
T Consensus         1 M~~v~ly~~~------~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~~~~~~~l~~~~g~~-----------------   57 (93)
T 1t1v_A            1 MSGLRVYSTS------VTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNP-----------------   57 (93)
T ss_dssp             CCCEEEEECS------SCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSCHHHHHHHHHHTTCT-----------------
T ss_pred             CCCEEEEEcC------CCCCchhhHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCC-----------------
Confidence            4689999999      99999      999999999999999999999999999999987631                 


Q ss_pred             CCCCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhcc
Q 041824          191 VQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEG  229 (289)
Q Consensus       191 ~~~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~  229 (289)
                       ..++   |||||||++|||+|++.+|+++|+|.++|+.
T Consensus        58 -~~~v---P~ifi~g~~igG~d~l~~l~~~g~L~~~l~~   92 (93)
T 1t1v_A           58 -KATP---PQIVNGNHYCGDYELFVEAVEQDTLQEFLKL   92 (93)
T ss_dssp             -TCCS---CEEEETTEEEEEHHHHHHHHHTTCHHHHTTC
T ss_pred             -CCCC---CEEEECCEEEeCHHHHHHHHhcCCHHHHhCC
Confidence             1244   9999999999999999999999999999963

>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A

Probab=99.86  E-value=1.5e-21  Score=155.53  Aligned_cols=91  Identities=18%  Similarity=0.332  Sum_probs=80.6

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      .+++|+||+++.. ..++|++|++|+++|+.+||+|+++||..+++.+++|++++|..                    ++
T Consensus        16 ~~~~Vvvy~k~t~-~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~~~~~~~~l~~~~g~~--------------------tv   74 (109)
T 3ipz_A           16 NSEKVVLFMKGTR-DFPMCGFSNTVVQILKNLNVPFEDVNILENEMLRQGLKEYSNWP--------------------TF   74 (109)
T ss_dssp             TSSSEEEEESBCS-SSBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTCS--------------------SS
T ss_pred             ccCCEEEEEecCC-CCCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHHCCC--------------------CC
Confidence            4678999999632 22379999999999999999999999999999999999987643                    55


Q ss_pred             CCCCEEEECCeEEechHHHHHHHHhCcHHHHhccC
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGI  230 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~  230 (289)
                         |+|||||++|||+|++.+|+++|+|.++|+.+
T Consensus        75 ---P~ifi~g~~iGG~d~l~~l~~~G~L~~~L~~a  106 (109)
T 3ipz_A           75 ---PQLYIGGEFFGGCDITLEAFKTGELQEEVEKA  106 (109)
T ss_dssp             ---CEEEETTEEEECHHHHHHHHHHSHHHHHHHHH
T ss_pred             ---CeEEECCEEEeCHHHHHHHHHcCcHHHHHHHh
Confidence               99999999999999999999999999999753

>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.85  E-value=3.4e-21  Score=154.19  Aligned_cols=95  Identities=14%  Similarity=0.213  Sum_probs=81.3

Q ss_pred             CcEEEEEecCCCCCCCCHHHH------HHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACK------AAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSV  191 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~------~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~  191 (289)
                      .+|+||+++      +|++|+      +|+++|+.+||+|+++||++|++.+++|+++++...            .+.++
T Consensus         8 m~V~vy~~~------~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~~~~~~------------~~~~g   69 (111)
T 2ct6_A            8 MVIRVFIAS------SSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEK------------KPTQG   69 (111)
T ss_dssp             CCEEEEECS------SCSCHHHHHHHHHHHHHHHHTTCCEEEEETTTCHHHHHHHHHSCCTTT------------CCSSS
T ss_pred             cEEEEEEcC------CCCCcccchhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhcccc------------cccCC
Confidence            479999999      999999      899999999999999999999999999998864210            00012


Q ss_pred             CCCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCCCc
Q 041824          192 QPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIR  233 (289)
Q Consensus       192 ~~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~~  233 (289)
                      +.++   |||||||++|||+|++.+|+++|+|+++|+..++.
T Consensus        70 ~~tv---P~vfi~g~~iGG~d~l~~l~~~g~L~~~L~~~~~~  108 (111)
T 2ct6_A           70 NPLP---PQIFNGDRYCGDYDSFFESKESNTVFSFLGLKSGP  108 (111)
T ss_dssp             SCCS---CEEEETTEEEEEHHHHHHHHTTTCHHHHHTCCSSS
T ss_pred             CCCC---CEEEECCEEEeCHHHHHHHHHcCCHHHHHcCCCCC
Confidence            4455   99999999999999999999999999999887754

>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}

Probab=99.85  E-value=6.1e-21  Score=155.68  Aligned_cols=94  Identities=18%  Similarity=0.324  Sum_probs=82.8

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCc---EEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVA---VSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQ  192 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~---y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~  192 (289)
                      ..++||||+++.. ...+|++|.+||++|+.+||+   |+++||..+++.+++|++++|.+                   
T Consensus        14 ~~~~Vvvfsk~t~-~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~~~~~~~~l~~~sg~~-------------------   73 (121)
T 3gx8_A           14 ESAPVVLFMKGTP-EFPKCGFSRATIGLLGNQGVDPAKFAAYNVLEDPELREGIKEFSEWP-------------------   73 (121)
T ss_dssp             HSCSEEEEESBCS-SSBCTTHHHHHHHHHHHHTBCGGGEEEEECTTCHHHHHHHHHHHTCC-------------------
T ss_pred             ccCCEEEEEeccC-CCCCCccHHHHHHHHHHcCCCcceEEEEEecCCHHHHHHHHHHhCCC-------------------
Confidence            3678999999732 234799999999999999999   99999999999999999987743                   


Q ss_pred             CCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCCCc
Q 041824          193 PLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIR  233 (289)
Q Consensus       193 ~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~~  233 (289)
                       ++   |||||||++|||+|++.+|+++|+|.++|+.+...
T Consensus        74 -tv---P~vfI~g~~iGG~d~l~~l~~~G~L~~~L~~~g~~  110 (121)
T 3gx8_A           74 -TI---PQLYVNKEFIGGCDVITSMARSGELADLLEEAQAL  110 (121)
T ss_dssp             -SS---CEEEETTEEEESHHHHHHHHHHTHHHHHHHHTTCB
T ss_pred             -CC---CeEEECCEEEecHHHHHHHHHcCChHHHHHHcCCC
Confidence             56   99999999999999999999999999999876543

>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0

Probab=99.83  E-value=2.1e-20  Score=147.04  Aligned_cols=84  Identities=23%  Similarity=0.398  Sum_probs=77.7

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHH-cccccccCCCCCcchhhccCCCCC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELM-MRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~ll-g~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      ..++|+||+++      +|++|++|+.+|+.+||+|+++||+.+++.+++|++++ |..                    +
T Consensus        14 ~~~~v~vy~~~------~Cp~C~~ak~~L~~~~i~y~~idI~~~~~~~~~l~~~~~g~~--------------------~   67 (99)
T 3qmx_A           14 VSAKIEIYTWS------TCPFCMRALALLKRKGVEFQEYCIDGDNEAREAMAARANGKR--------------------S   67 (99)
T ss_dssp             CCCCEEEEECT------TCHHHHHHHHHHHHHTCCCEEEECTTCHHHHHHHHHHTTTCC--------------------C
T ss_pred             CCCCEEEEEcC------CChhHHHHHHHHHHCCCCCEEEEcCCCHHHHHHHHHHhCCCC--------------------C
Confidence            45689999999      99999999999999999999999999999999999887 432                    4


Q ss_pred             CCCCCEEEECCeEEechHHHHHHHHhCcHHHHhc
Q 041824          195 PPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIE  228 (289)
Q Consensus       195 v~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~  228 (289)
                      +   |+|||||++|||++++.+|+++|+|.++|+
T Consensus        68 v---P~ifi~g~~igG~d~l~~~~~~g~L~~~L~   98 (99)
T 3qmx_A           68 L---PQIFIDDQHIGGCDDIYALDGAGKLDPLLH   98 (99)
T ss_dssp             S---CEEEETTEEEESHHHHHHHHHTTCHHHHHT
T ss_pred             C---CEEEECCEEEeChHHHHHHHHcCCHHHHhc
Confidence            5   999999999999999999999999999986

>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}

Probab=99.83  E-value=8.4e-21  Score=156.94  Aligned_cols=97  Identities=20%  Similarity=0.251  Sum_probs=81.8

Q ss_pred             HHHHhhhcCCCCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhC---CCcEEEEEcCCC---hhHHHHHHHHHccccccc
Q 041824          104 VLERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENF---GVAVSERDVSMD---RGFKEELRELMMRRRRRS  177 (289)
Q Consensus       104 ~l~~f~~~~pp~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~---gV~y~ErDVs~d---~~~reEL~~llg~~~~~~  177 (289)
                      +.+.|.++   ..+++|+||+++      +|++|.+||++|+..   +++|+++||+.+   .+.+++|++++|.+    
T Consensus         3 p~~~~~~i---i~~~~Vvvysk~------~Cp~C~~ak~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~----   69 (127)
T 3l4n_A            3 VQKEYSLI---LDLSPIIIFSKS------TCSYSKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRG----   69 (127)
T ss_dssp             HHHHHHHH---HTSCSEEEEECT------TCHHHHHHHHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHSCC----
T ss_pred             HHHHHHHH---HccCCEEEEEcC------CCccHHHHHHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHHcCCC----
Confidence            34455554   357789999999      999999999999985   899999999876   45677777776643    


Q ss_pred             CCCCCcchhhccCCCCCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCCC
Q 041824          178 SSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPI  232 (289)
Q Consensus       178 ~~s~~~~~~g~~t~~~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~  232 (289)
                                      ++   |||||||++|||+|++.+|+++|+|.++|+.+..
T Consensus        70 ----------------tV---P~IfI~G~~IGG~ddl~~l~~~G~L~~lL~~~g~  105 (127)
T 3l4n_A           70 ----------------TV---PNLLVNGVSRGGNEEIKKLHTQGKLLESLQVWSD  105 (127)
T ss_dssp             ----------------SS---CEEEETTEECCCHHHHHHHHHTTCHHHHHHHTCT
T ss_pred             ----------------Cc---ceEEECCEEEcCHHHHHHHHHCCCHHHHHHHhcC
Confidence                            56   9999999999999999999999999999988654

>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A

Probab=99.83  E-value=1.2e-20  Score=157.70  Aligned_cols=90  Identities=20%  Similarity=0.324  Sum_probs=81.4

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      +++|+||+++++. +.+|++|.+|+++|+.+||+|+++||.++++.+++|++++|..                    ++ 
T Consensus        34 ~~~Vvvy~ks~~~-~~~Cp~C~~ak~~L~~~gv~y~~vdI~~d~~~~~~L~~~~G~~--------------------tv-   91 (135)
T 2wci_A           34 ENPILLYMKGSPK-LPSCGFSAQAVQALAACGERFAYVDILQNPDIRAELPKYANWP--------------------TF-   91 (135)
T ss_dssp             HCSEEEEESBCSS-SBSSHHHHHHHHHHHTTCSCCEEEEGGGCHHHHHHHHHHHTCC--------------------SS-
T ss_pred             cCCEEEEEEecCC-CCCCccHHHHHHHHHHcCCceEEEECCCCHHHHHHHHHHHCCC--------------------Cc-
Confidence            4679999997655 4599999999999999999999999999999999999987643                    55 


Q ss_pred             CCCEEEECCeEEechHHHHHHHHhCcHHHHhccC
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGI  230 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~  230 (289)
                        |+|||||++|||+|++.+|+++|+|.++|+.+
T Consensus        92 --P~VfI~G~~iGG~d~l~~l~~~G~L~~~L~~~  123 (135)
T 2wci_A           92 --PQLWVDGELVGGCDIVIEMYQRGELQQLIKET  123 (135)
T ss_dssp             --CEEEETTEEEESHHHHHHHHHHTHHHHHHHHH
T ss_pred             --CEEEECCEEEEChHHHHHHHHCChHHHHHHHc
Confidence              99999999999999999999999999999754

>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1

Probab=99.83  E-value=2.4e-20  Score=147.57  Aligned_cols=92  Identities=17%  Similarity=0.307  Sum_probs=81.7

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      +++|+||+++.+ .+.+|++|++|+++|+.+||+|+++||+.|++.+++|++++|..                    ++ 
T Consensus        14 ~~~vvvy~~g~~-~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g~~--------------------~v-   71 (109)
T 1wik_A           14 KASVMLFMKGNK-QEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSNWP--------------------TY-   71 (109)
T ss_dssp             TSSEEEEESSTT-TCCCSSTHHHHHHHHHHTCSCEEEEESSSCHHHHHHHHHHHSCC--------------------SS-
T ss_pred             cCCEEEEEecCC-CCCCCchHHHHHHHHHHcCCCeEEEECCCCHHHHHHHHHHhCCC--------------------CC-
Confidence            567999999544 23499999999999999999999999999999999999887643                    45 


Q ss_pred             CCCEEEECCeEEechHHHHHHHHhCcHHHHhccCCC
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPI  232 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~  232 (289)
                        |+|||||++|||++++.+|+++|+|.++|+.+.+
T Consensus        72 --P~ifi~g~~igG~d~l~~l~~~g~L~~~L~~a~~  105 (109)
T 1wik_A           72 --PQLYVRGDLVGGLDIVKELKDNGELLPILKGESG  105 (109)
T ss_dssp             --CEEECSSSEEECHHHHHHHHHHTCSHHHHHTCCS
T ss_pred             --CEEEECCEEEcCHHHHHHHHHCCCHHHHHhcccC
Confidence              9999999999999999999999999999987554

>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}

Probab=99.82  E-value=8.1e-20  Score=143.16  Aligned_cols=89  Identities=20%  Similarity=0.344  Sum_probs=78.9

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      +++|+||+++.++ +.+|++|++++.+|+.++|+|.++||+.+++.+++|.++.|..                    ++ 
T Consensus        16 ~~~vvvf~~g~~~-~~~C~~C~~~~~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g~~--------------------~v-   73 (105)
T 2yan_A           16 KASVMLFMKGNKQ-EAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKAYSNWP--------------------TY-   73 (105)
T ss_dssp             SSSEEEEESBCSS-SBCTTHHHHHHHHHHHHTCCCEEEEGGGCHHHHHHHHHHHTCC--------------------SS-
T ss_pred             cCCEEEEEecCCC-CCCCccHHHHHHHHHHCCCCeEEEECCCCHHHHHHHHHHHCCC--------------------CC-
Confidence            4579999994332 3499999999999999999999999999999999999887643                    45 


Q ss_pred             CCCEEEECCeEEechHHHHHHHHhCcHHHHhcc
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEG  229 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~  229 (289)
                        |+|||||++|||+|++.+|+++|+|.++|+.
T Consensus        74 --P~v~i~g~~igg~d~~~~l~~~g~L~~~l~~  104 (105)
T 2yan_A           74 --PQLYVKGELVGGLDIVKELKENGELLPILRG  104 (105)
T ss_dssp             --CEEEETTEEEECHHHHHHHHHTTCHHHHHTT
T ss_pred             --CeEEECCEEEeChHHHHHHHHCCCHHHHhcc
Confidence              9999999999999999999999999999964

>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0

Probab=99.81  E-value=1.1e-19  Score=145.05  Aligned_cols=84  Identities=20%  Similarity=0.414  Sum_probs=74.3

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC---hhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD---RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d---~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      +++|+||+++      +|++|++|+.+|+.+||+|+++||+.+   .+.+++|++..|..                    
T Consensus        16 ~~~v~vy~~~------~Cp~C~~ak~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~--------------------   69 (114)
T 3h8q_A           16 RSRVVIFSKS------YCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQK--------------------   69 (114)
T ss_dssp             HCSEEEEECT------TCHHHHHHHHHHHHTTCCCEEEETTTSTTHHHHHHHHHHHHSCC--------------------
T ss_pred             cCCEEEEEcC------CCCcHHHHHHHHHHcCCCcEEEEecCCCChHHHHHHHHHHhCCC--------------------
Confidence            5679999999      999999999999999999999999963   34567777776642                    


Q ss_pred             CCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhcc
Q 041824          194 LPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEG  229 (289)
Q Consensus       194 tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~  229 (289)
                      ++   |+|||||++|||+|++.+|+++|+|.++|+.
T Consensus        70 tv---P~vfi~g~~igG~d~l~~l~~~G~L~~~l~~  102 (114)
T 3h8q_A           70 TV---PNIFVNKVHVGGCDQTFQAYQSGLLQKLLQE  102 (114)
T ss_dssp             SS---CEEEETTEEEESHHHHHHHHHHTHHHHHHHS
T ss_pred             cc---CEEEECCEEEeCHHHHHHHHHCCCHHHHhcC
Confidence            55   9999999999999999999999999999984

>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*

Probab=99.80  E-value=2.6e-19  Score=141.13  Aligned_cols=86  Identities=24%  Similarity=0.422  Sum_probs=74.4

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC----hhHHHHHHHHHcccccccCCCCCcchhhccCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD----RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQ  192 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d----~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~  192 (289)
                      +++|+||+++      +|++|++++.+|+.+||+|+++||+.+    ++.+++|.++.|..                   
T Consensus        18 ~~~v~vy~~~------~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~~~~~l~~~~g~~-------------------   72 (113)
T 3rhb_A           18 ENTVVIYSKT------WCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQH-------------------   72 (113)
T ss_dssp             HSSEEEEECT------TCHHHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHHHHHHHSCC-------------------
T ss_pred             cCCEEEEECC------CChhHHHHHHHHHHcCCCCeEEEeecCCCChHHHHHHHHHHhCCC-------------------
Confidence            3569999999      999999999999999999999999874    55667777766532                   


Q ss_pred             CCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCC
Q 041824          193 PLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIP  231 (289)
Q Consensus       193 ~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~  231 (289)
                       ++   |+|||||++|||++++.+|+++|+|.++|+.+.
T Consensus        73 -tv---P~ifi~g~~igG~~~~~~~~~~g~L~~~l~~~~  107 (113)
T 3rhb_A           73 -TV---PNVFVCGKHIGGCTDTVKLNRKGDLELMLAEAN  107 (113)
T ss_dssp             -SS---CEEEETTEEEESHHHHHHHHHHTHHHHHHTC--
T ss_pred             -Cc---CEEEECCEEEcCcHHHHHHHHcCCHHHHHHHHh
Confidence             45   999999999999999999999999999998764

>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*

Probab=99.76  E-value=1.9e-18  Score=141.87  Aligned_cols=85  Identities=16%  Similarity=0.404  Sum_probs=76.1

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHH-HHHHHhCC---CcEEEEEcCCCh---hHHHHHHHHHcccccccCCCCCcchhhcc
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAA-KSVIENFG---VAVSERDVSMDR---GFKEELRELMMRRRRRSSSSNNNEEEAES  189 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~a-k~iL~~~g---V~y~ErDVs~d~---~~reEL~~llg~~~~~~~~s~~~~~~g~~  189 (289)
                      +++|+||+++      +|++|.+| +.+|+.++   ++|+++||+.++   +.+++|+++.|..                
T Consensus        36 ~~~Vvvy~~~------~Cp~C~~a~k~~L~~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~----------------   93 (129)
T 3ctg_A           36 QKEVFVAAKT------YCPYCKATLSTLFQELNVPKSKALVLELDEMSNGSEIQDALEEISGQK----------------   93 (129)
T ss_dssp             HSSEEEEECT------TCHHHHHHHHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCC----------------
T ss_pred             CCCEEEEECC------CCCchHHHHHHHHHhcCccCCCcEEEEccccCCHHHHHHHHHHHhCCC----------------
Confidence            4569999999      99999999 99999999   999999999874   5678888887643                


Q ss_pred             CCCCCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccC
Q 041824          190 SVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGI  230 (289)
Q Consensus       190 t~~~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~  230 (289)
                          ++   |+|||||++|||+|++.+|+++|+|.++|+.+
T Consensus        94 ----tV---P~vfi~g~~igG~d~l~~l~~~G~L~~~L~~a  127 (129)
T 3ctg_A           94 ----TV---PNVYINGKHIGGNSDLETLKKNGKLAEILKPV  127 (129)
T ss_dssp             ----SS---CEEEETTEEEESHHHHHHHHHTTHHHHHTTTT
T ss_pred             ----CC---CEEEECCEEEcCHHHHHHHHHCCCHHHHHHHH
Confidence                45   99999999999999999999999999999764

>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}

Probab=99.75  E-value=1.1e-17  Score=126.36  Aligned_cols=87  Identities=26%  Similarity=0.469  Sum_probs=79.7

Q ss_pred             CCCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCC
Q 041824          113 PPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQ  192 (289)
Q Consensus       113 pp~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~  192 (289)
                      +|+.+++|++|+++      +|++|++++.+|+.++|+|+++||+.++..++++.++.+..                   
T Consensus         1 ~p~~m~~v~ly~~~------~C~~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~~-------------------   55 (92)
T 2khp_A            1 GPGSMVDVIIYTRP------GCPYCARAKALLARKGAEFNEIDASATPELRAEMQERSGRN-------------------   55 (92)
T ss_dssp             CCCCCCCEEEEECT------TCHHHHHHHHHHHHTTCCCEEEESTTSHHHHHHHHHHHTSS-------------------
T ss_pred             CCCCcccEEEEECC------CChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhCCC-------------------
Confidence            36667899999999      99999999999999999999999999888888998887643                   


Q ss_pred             CCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhc
Q 041824          193 PLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIE  228 (289)
Q Consensus       193 ~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~  228 (289)
                       ++   |+||+||++|||++++.+++++|+|+++|+
T Consensus        56 -~v---P~l~~~g~~i~g~~~i~~~~~~~~l~~~l~   87 (92)
T 2khp_A           56 -TF---PQIFIGSVHVGGCDDLYALEDEGKLDSLLK   87 (92)
T ss_dssp             -CC---CEEEETTEEEESHHHHHHHHTTTCHHHHHH
T ss_pred             -Cc---CEEEECCEEEcCHHHHHHHHHcCCHHHHHh
Confidence             45   999999999999999999999999999996

>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}

Probab=99.74  E-value=5.5e-18  Score=127.80  Aligned_cols=87  Identities=22%  Similarity=0.507  Sum_probs=77.9

Q ss_pred             CCCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHH-cccccccCCCCCcchhhccCC
Q 041824          113 PPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELM-MRRRRRSSSSNNNEEEAESSV  191 (289)
Q Consensus       113 pp~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~ll-g~~~~~~~~s~~~~~~g~~t~  191 (289)
                      ||..+++|++|+++      +|++|++++.+|+.++++|+++||+  ++.++++.++. |..                  
T Consensus         1 ~~~mm~~v~~y~~~------~C~~C~~~~~~L~~~~i~~~~vdv~--~~~~~~l~~~~~~~~------------------   54 (89)
T 2klx_A            1 GPGSMKEIILYTRP------NCPYCKRARDLLDKKGVKYTDIDAS--TSLRQEMVQRANGRN------------------   54 (89)
T ss_dssp             CCCCCCCEEEESCS------CCTTTHHHHHHHHHHTCCEEEECSC--HHHHHHHHHHHHSSC------------------
T ss_pred             CCCCcceEEEEECC------CChhHHHHHHHHHHcCCCcEEEECC--HHHHHHHHHHhCCCC------------------
Confidence            57778899999999      9999999999999999999999998  66778888877 532                  


Q ss_pred             CCCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccC
Q 041824          192 QPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGI  230 (289)
Q Consensus       192 ~~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~  230 (289)
                        ++   |+||+||++|||++++.+++++|+|.++|+.+
T Consensus        55 --~v---P~l~~~g~~i~g~~~i~~~~~~g~l~~~l~~~   88 (89)
T 2klx_A           55 --TF---PQIFIGDYHVGGCDDLYALENKGKLDSLLQDV   88 (89)
T ss_dssp             --CS---CEEEETTEECCSHHHHHHHHHHTTHHHHHHHH
T ss_pred             --Cc---CEEEECCEEEeChHHHHHHHHcCcHHHHHhhc
Confidence              45   99999999999999999999999999999753

>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*

Probab=99.73  E-value=2e-17  Score=121.35  Aligned_cols=81  Identities=25%  Similarity=0.450  Sum_probs=74.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +|++|+++      +|++|++++.+|+.+||+|+++||+.++..++++.+..|..                    ++   
T Consensus         2 ~i~~y~~~------~C~~C~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~~~~--------------------~v---   52 (82)
T 1fov_A            2 NVEIYTKE------TCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRT--------------------TV---   52 (82)
T ss_dssp             CEEEEECS------SCHHHHHHHHHHHHHTCCCEEEECTTCSHHHHHHHHHHSSC--------------------CS---
T ss_pred             cEEEEECC------CChhHHHHHHHHHHCCCCcEEEECCCCHHHHHHHHHHhCCC--------------------Cc---
Confidence            68999999      99999999999999999999999999888888888877643                    45   


Q ss_pred             CEEEECCeEEechHHHHHHHHhCcHHHHhc
Q 041824          199 PRVFVKGRYVGGAEEVLRIVEEGWFGELIE  228 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E~G~L~~lL~  228 (289)
                      |+||+||++|||++++.+++++|+|+++|+
T Consensus        53 P~l~~~g~~i~g~~~i~~~~~~g~l~~~l~   82 (82)
T 1fov_A           53 PQIFIDAQHIGGYDDLYALDARGGLDPLLK   82 (82)
T ss_dssp             CEEEETTEEEESHHHHHHHHHTTCSHHHHC
T ss_pred             CEEEECCEEEeCHHHHHHHHHCCCHHHHhC
Confidence            999999999999999999999999999984

>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*

Probab=99.73  E-value=7.5e-18  Score=135.62  Aligned_cols=85  Identities=25%  Similarity=0.460  Sum_probs=75.8

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHH-HHHHHhCC---CcEEEEEcCCCh---hHHHHHHHHHcccccccCCCCCcchhhcc
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAA-KSVIENFG---VAVSERDVSMDR---GFKEELRELMMRRRRRSSSSNNNEEEAES  189 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~a-k~iL~~~g---V~y~ErDVs~d~---~~reEL~~llg~~~~~~~~s~~~~~~g~~  189 (289)
                      +++|+||+++      +|++|+++ +.+|+.++   |+|.++||+.++   +.+++|.+++|..                
T Consensus        24 ~~~Vvvf~~~------~Cp~C~~alk~~L~~~~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~----------------   81 (118)
T 3c1r_A           24 ENEIFVASKT------YCPYCHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQR----------------   81 (118)
T ss_dssp             HSSEEEEECS------SCHHHHHHHHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCC----------------
T ss_pred             cCcEEEEEcC------CCcCHHHHHHHHHHHcCCCCCCeEEEECccCCChHHHHHHHHHHhCCC----------------
Confidence            3469999999      99999999 99999999   999999999874   4778888887643                


Q ss_pred             CCCCCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccC
Q 041824          190 SVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGI  230 (289)
Q Consensus       190 t~~~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~  230 (289)
                          ++   |+|||||++|||+|++.+|+++|+|+++|+.+
T Consensus        82 ----tv---P~vfi~g~~igG~d~l~~l~~~g~L~~~L~~~  115 (118)
T 3c1r_A           82 ----TV---PNIYINGKHIGGNDDLQELRETGELEELLEPI  115 (118)
T ss_dssp             ----SS---CEEEETTEEEESHHHHHHHHHHTHHHHHHHHH
T ss_pred             ----Cc---CEEEECCEEEEcHHHHHHHHHCCcHHHHHHHc
Confidence                45   99999999999999999999999999999753

>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A

Probab=99.71  E-value=6.6e-17  Score=122.35  Aligned_cols=80  Identities=18%  Similarity=0.253  Sum_probs=67.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcC-----CChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVS-----MDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs-----~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      +|+||++++..  .+|++|.+||++|+.+||+|+++||+     .+++.+++|++++|..                  ..
T Consensus         1 ~v~iY~~~~~~--~~Cp~C~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~------------------~~   60 (87)
T 1aba_A            1 MFKVYGYDSNI--HKCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRD------------------TQ   60 (87)
T ss_dssp             CEEEEECCTTT--SCCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCS------------------CC
T ss_pred             CEEEEEeCCCC--CcCccHHHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCC------------------CC
Confidence            48999998655  48999999999999999999999999     8899999999988753                  00


Q ss_pred             CCCCCCEEEE-CCeEEechHHHHHHH
Q 041824          194 LPPVLPRVFV-KGRYVGGAEEVLRIV  218 (289)
Q Consensus       194 tv~~LPqIFI-~G~~IGG~del~~L~  218 (289)
                      ...++||||| ||++|||++++.+|+
T Consensus        61 ~~~tvP~v~i~~g~~igG~d~l~~~~   86 (87)
T 1aba_A           61 IGLTMPQVFAPDGSHIGGFDQLREYF   86 (87)
T ss_dssp             TTCCSCEEECTTSCEEESHHHHHHHT
T ss_pred             CCCccCEEEEECCEEEeCHHHHHHhc
Confidence            0014599999 999999999998876

>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*

Probab=99.71  E-value=8.5e-17  Score=123.90  Aligned_cols=86  Identities=19%  Similarity=0.390  Sum_probs=76.5

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCc---EEEEEcCCC---hhHHHHHHHHHcccccccCCCCCcchhhcc
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVA---VSERDVSMD---RGFKEELRELMMRRRRRSSSSNNNEEEAES  189 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~---y~ErDVs~d---~~~reEL~~llg~~~~~~~~s~~~~~~g~~  189 (289)
                      .+++|++|+++      +|++|++++.+|+.++++   |.++||+.+   ++.+++|.+..|..                
T Consensus        10 ~~~~v~~f~~~------~C~~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~----------------   67 (105)
T 1kte_A           10 QPGKVVVFIKP------TCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGAR----------------   67 (105)
T ss_dssp             CTTCEEEEECS------SCHHHHHHHHHHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCC----------------
T ss_pred             ccCCEEEEEcC------CCHhHHHHHHHHHHcCCCCCccEEEEccCCCCHHHHHHHHHHHhCCC----------------
Confidence            35679999999      999999999999999999   999999987   46777888877643                


Q ss_pred             CCCCCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccC
Q 041824          190 SVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGI  230 (289)
Q Consensus       190 t~~~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~  230 (289)
                          ++   |+|||+|++|||++++.+++++|+|+++|+.+
T Consensus        68 ----~v---P~i~~~g~~i~g~~~~~~~~~~g~L~~~l~~~  101 (105)
T 1kte_A           68 ----TV---PRVFIGKECIGGCTDLESMHKRGELLTRLQQV  101 (105)
T ss_dssp             ----CS---CEEEETTEEEESHHHHHHHHHHTHHHHHHHHH
T ss_pred             ----Cc---CeEEECCEEEeccHHHHHHHHCCcHHHHHHHc
Confidence                45   99999999999999999999999999999764

>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B

Probab=99.68  E-value=2.6e-16  Score=124.86  Aligned_cols=87  Identities=21%  Similarity=0.420  Sum_probs=78.0

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCc---EEEEEcCCCh---hHHHHHHHHHcccccccCCCCCcchhhcc
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVA---VSERDVSMDR---GFKEELRELMMRRRRRSSSSNNNEEEAES  189 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~---y~ErDVs~d~---~~reEL~~llg~~~~~~~~s~~~~~~g~~  189 (289)
                      .+++|++|+++      +|++|++++.+|+.++++   |.++||+.++   +.+++|.+..|..                
T Consensus        17 ~~~~vv~f~~~------~Cp~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~----------------   74 (114)
T 2hze_A           17 ANNKVTIFVKY------TCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGK----------------   74 (114)
T ss_dssp             CTTCEEEEECT------TCHHHHHHHHHHTTSCBCTTSEEEEEGGGSSSHHHHHHHHHHHHSCC----------------
T ss_pred             ccCCEEEEEeC------CChhHHHHHHHHHHcCCCcCceEEEEccCCCChHHHHHHHHHHhCCC----------------
Confidence            46789999999      999999999999999999   9999999875   6778888877643                


Q ss_pred             CCCCCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCC
Q 041824          190 SVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIP  231 (289)
Q Consensus       190 t~~~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~  231 (289)
                          ++   |+|||||++|||++++..++++|+|.++|+...
T Consensus        75 ----~v---P~v~i~g~~igg~~~~~~~~~~~~L~~~L~~~g  109 (114)
T 2hze_A           75 ----TV---PRIFFGKTSIGGYSDLLEIDNMDALGDILSSIG  109 (114)
T ss_dssp             ----SS---CEEEETTEEEESHHHHHHHHHTTCHHHHHHHTT
T ss_pred             ----Cc---CEEEECCEEEeCcHHHHHHHHCChHHHHHHHcC
Confidence                45   999999999999999999999999999998654

>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}

Probab=99.66  E-value=6.1e-17  Score=155.37  Aligned_cols=88  Identities=25%  Similarity=0.393  Sum_probs=76.6

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHH-HHHhCCCcEEEEEc------CCChhHHHHHHHHHcccccccCCCCCcchhhc
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKS-VIENFGVAVSERDV------SMDRGFKEELRELMMRRRRRSSSSNNNEEEAE  188 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~-iL~~~gV~y~ErDV------s~d~~~reEL~~llg~~~~~~~~s~~~~~~g~  188 (289)
                      .+++|+||+++      +|++|.+|++ +|+.+||+|+++||      +++++++++|++++|.+               
T Consensus       259 ~~~~VvVYsk~------~CPyC~~Ak~~LL~~~gV~y~eidVlEld~~~~~~e~~~~L~~~tG~~---------------  317 (362)
T 2jad_A          259 AENEIFVASKT------YCPYSHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQR---------------  317 (362)
T ss_dssp             HTCSEEEEECT------TCHHHHHHHHHHHTTTCCCTTTEEEEEGGGSTTHHHHHHHHHHHHCCC---------------
T ss_pred             ccCCEEEEEcC------CCcchHHHHHHHHHHcCCCcceEEEEEeccccCCHHHHHHHHHHHCCC---------------
Confidence            36789999999      9999999997 89999999877776      34677889999887643               


Q ss_pred             cCCCCCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCCC
Q 041824          189 SSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPI  232 (289)
Q Consensus       189 ~t~~~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~  232 (289)
                           ++   |||||||++|||+|+|.+|+++|+|+++|+.+..
T Consensus       318 -----TV---PqVFI~Gk~IGG~DdL~~L~~~GeL~~lL~~~~~  353 (362)
T 2jad_A          318 -----TV---PNIYINGKHIGGNDDLQELRETGELEELLEPILA  353 (362)
T ss_dssp             -----SS---CEEEETTEEEESHHHHHHHHHSSHHHHHHHHHC-
T ss_pred             -----Cc---CEEEECCEEEEChHHHHHhhhCChHHHHHHhCch
Confidence                 56   9999999999999999999999999999987553

>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.63  E-value=7.1e-16  Score=125.76  Aligned_cols=85  Identities=28%  Similarity=0.514  Sum_probs=76.4

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC---hhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD---RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d---~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      ++|+||+++      +|++|++++.+|+.++++|+++||+.+   ++++++|.++.|..                    +
T Consensus        27 ~~vvvf~~~------~Cp~C~~~~~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~--------------------~   80 (130)
T 2cq9_A           27 NCVVIFSKT------SCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGER--------------------T   80 (130)
T ss_dssp             SSEEEEECS------SCSHHHHHHHHHHHHTCCCEEEETTTSTTHHHHHHHHHHHHSSC--------------------C
T ss_pred             CcEEEEEcC------CChHHHHHHHHHHHcCCCcEEEECcCCcCcHHHHHHHHHHhCCC--------------------C
Confidence            469999999      999999999999999999999999987   67777888877643                    4


Q ss_pred             CCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCC
Q 041824          195 PPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIP  231 (289)
Q Consensus       195 v~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~  231 (289)
                      +   |+|||||++|||++++.++++.|+|.++|+.+.
T Consensus        81 v---P~l~i~G~~igg~~~l~~~~~~~~L~~~L~~~g  114 (130)
T 2cq9_A           81 V---PRIFVNGTFIGGATDTHRLHKEGKLLPLVHQCY  114 (130)
T ss_dssp             S---SEEEETTEEEEEHHHHHHHHHHTSSHHHHHHHS
T ss_pred             c---CEEEECCEEEcChHHHHHHHHcCcHHHHHHHcC
Confidence            5   999999999999999999999999999998753

>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*

Probab=99.62  E-value=1.7e-15  Score=127.00  Aligned_cols=85  Identities=28%  Similarity=0.514  Sum_probs=76.4

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC---hhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD---RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d---~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      ++|+||+++      +|++|++++.+|+.++++|+++||+.+   ++.+++|.++.|..                    +
T Consensus        49 ~~Vvvf~~~------~Cp~C~~~k~~L~~~~i~~~~vdId~~~~~~~~~~~L~~~~g~~--------------------t  102 (146)
T 2ht9_A           49 NCVVIFSKT------SCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGER--------------------T  102 (146)
T ss_dssp             CSEEEEECT------TCHHHHHHHHHHHHHTCCCEEEEGGGCTTHHHHHHHHHHHHSCC--------------------C
T ss_pred             CCEEEEECC------CChhHHHHHHHHHHcCCCeEEEECccCcCCHHHHHHHHHHhCCC--------------------C
Confidence            369999999      999999999999999999999999987   66777888877643                    4


Q ss_pred             CCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCC
Q 041824          195 PPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIP  231 (289)
Q Consensus       195 v~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~  231 (289)
                      +   |+|||||++|||++++..++++|+|.++|+.+.
T Consensus       103 v---P~ifi~G~~igG~d~l~~l~~~g~L~~~L~~~g  136 (146)
T 2ht9_A          103 V---PRIFVNGTFIGGATDTHRLHKEGKLLPLVHQCY  136 (146)
T ss_dssp             S---CEEEETTEEEESHHHHHHHHHTTCHHHHHHHTT
T ss_pred             c---CeEEECCEEEeCchHHHHHHHcChHHHHHHHcC
Confidence            5   999999999999999999999999999998764

>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}

Probab=99.61  E-value=2.1e-15  Score=118.28  Aligned_cols=68  Identities=21%  Similarity=0.233  Sum_probs=59.4

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      ..+|+||+++      +|++|.+||++|+++||+|+++||+.|++.++++.++.+..                   .++ 
T Consensus         3 ta~I~vYs~~------~Cp~C~~aK~~L~~~gi~y~~idi~~d~~~~~~~~~~~~G~-------------------~tV-   56 (92)
T 2lqo_A            3 TAALTIYTTS------WCGYCLRLKTALTANRIAYDEVDIEHNRAAAEFVGSVNGGN-------------------RTV-   56 (92)
T ss_dssp             SSCEEEEECT------TCSSHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHHHSSSS-------------------SCS-
T ss_pred             CCcEEEEcCC------CCHhHHHHHHHHHhcCCceEEEEcCCCHHHHHHHHHHcCCC-------------------CEe-
Confidence            4579999999      99999999999999999999999999999999999886322                   255 


Q ss_pred             CCCEEEE-CCeEEechH
Q 041824          197 VLPRVFV-KGRYVGGAE  212 (289)
Q Consensus       197 ~LPqIFI-~G~~IGG~d  212 (289)
                        |+||| ||..++|++
T Consensus        57 --P~I~i~Dg~~l~~~~   71 (92)
T 2lqo_A           57 --PTVKFADGSTLTNPS   71 (92)
T ss_dssp             --CEEEETTSCEEESCC
T ss_pred             --CEEEEeCCEEEeCCC
Confidence              99999 688888863

>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*

Probab=99.61  E-value=2.3e-15  Score=111.57  Aligned_cols=79  Identities=20%  Similarity=0.177  Sum_probs=63.7

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh--HHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG--FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~--~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      -+|+||+++      +|++|++++.+|+.+|++|++++|+.+.+  .+++|.++.|..                  ...+
T Consensus         4 m~v~ly~~~------~Cp~C~~~~~~L~~~~i~~~~~~vd~~~~~~~~~el~~~~g~~------------------~~~~   59 (89)
T 3msz_A            4 MKVKIYTRN------GCPYCVWAKQWFEENNIAFDETIIDDYAQRSKFYDEMNQSGKV------------------IFPI   59 (89)
T ss_dssp             CCEEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTTTCC------------------SSCC
T ss_pred             eEEEEEEcC------CChhHHHHHHHHHHcCCCceEEEeecCCChhHHHHHHHHhCCC------------------CCCC
Confidence            469999999      99999999999999999999998876543  556777766541                  0011


Q ss_pred             CCCCEEEECCeEEechHHHHHHHHh
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E~  220 (289)
                      .++|+|||||++|||++++.+++++
T Consensus        60 ~~vP~i~i~g~~i~g~~~i~~~~~~   84 (89)
T 3msz_A           60 STVPQIFIDDEHIGGFTELKANADK   84 (89)
T ss_dssp             CSSCEEEETTEEEESHHHHHHTHHH
T ss_pred             CccCEEEECCEEEeChHHHHHHHHH
Confidence            3449999999999999999998764

>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A

Probab=99.46  E-value=3.5e-14  Score=104.54  Aligned_cols=77  Identities=22%  Similarity=0.333  Sum_probs=64.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh-----CCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN-----FGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~-----~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      +|++|+++      +|++|++++.+|+.     .+|.|.++||+.++..+++|.+..|..                    
T Consensus         2 ~v~~f~~~------~C~~C~~~~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~~--------------------   55 (85)
T 1ego_A            2 QTVIFGRS------GCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKP--------------------   55 (85)
T ss_dssp             EEEEECCT------TSTHHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCC--------------------
T ss_pred             EEEEEeCC------CCCCHHHHHHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhCCC--------------------
Confidence            58999999      99999999999998     899999999987655556787776621                    


Q ss_pred             CCCCCCEEEECCeEEechHHHHHHHHhCc
Q 041824          194 LPPVLPRVFVKGRYVGGAEEVLRIVEEGW  222 (289)
Q Consensus       194 tv~~LPqIFI~G~~IGG~del~~L~E~G~  222 (289)
                       +.++|+||+||++|||++++.++++++-
T Consensus        56 -~~~vP~i~~~g~~i~~~~~l~~~~~~~~   83 (85)
T 1ego_A           56 -VETVPQIFVDQQHIGGYTDFAAWVKENL   83 (85)
T ss_dssp             -SCCSCEEEETTEEEESSHHHHHHHHHHH
T ss_pred             -CceeCeEEECCEEEECHHHHHHHHHHhc
Confidence             1234999999999999999999988753

>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}

Probab=99.44  E-value=2.4e-13  Score=105.89  Aligned_cols=74  Identities=23%  Similarity=0.285  Sum_probs=57.3

Q ss_pred             CCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCC-ChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          115 DGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSM-DRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       115 ~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~-d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      .++++|+||+++      +|++|++++.+|+.++++|+++||+. +.+.++++.+.+...                .+..
T Consensus        19 ~~~~~v~ly~~~------~Cp~C~~ak~~L~~~~i~y~~vdI~~~~~~~~~~~~~~l~~~----------------~g~~   76 (103)
T 3nzn_A           19 VDRGKVIMYGLS------TCVWCKKTKKLLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRF----------------NPSV   76 (103)
T ss_dssp             BCCSCEEEEECS------SCHHHHHHHHHHHHHTBCEEEEEGGGCCHHHHHHHHHHHHHH----------------CTTC
T ss_pred             CCCCeEEEEcCC------CCchHHHHHHHHHHcCCCcEEEEeeccCcccHHHHHHHHHHh----------------CCCC
Confidence            356789999999      99999999999999999999999997 344444554332211                0122


Q ss_pred             CCCCCCEEEECC-eEEechHH
Q 041824          194 LPPVLPRVFVKG-RYVGGAEE  213 (289)
Q Consensus       194 tv~~LPqIFI~G-~~IGG~de  213 (289)
                      ++   |+|||+| ++|||+++
T Consensus        77 ~v---P~l~i~~~~~igg~~~   94 (103)
T 3nzn_A           77 SF---PTTIINDEKAIVGFKE   94 (103)
T ss_dssp             CS---CEEEETTTEEEESCCH
T ss_pred             cc---CEEEECCCEEEEcCCH
Confidence            45   9999999 99999976

>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*

Probab=99.44  E-value=2.2e-13  Score=134.23  Aligned_cols=84  Identities=18%  Similarity=0.401  Sum_probs=75.5

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC---hhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD---RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d---~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      +++|+||+++      +|++|.++|++|+.++++|+++||+.+   ++++++|++++|..                    
T Consensus        17 ~~~v~vy~~~------~Cp~C~~~k~~L~~~~i~~~~~dv~~~~~~~~~~~~l~~~~g~~--------------------   70 (598)
T 2x8g_A           17 SAAVILFSKT------TCPYCKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSKIE--------------------   70 (598)
T ss_dssp             HCSEEEEECT------TCHHHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHTHHHHSCC--------------------
T ss_pred             cCCEEEEECC------CChhHHHHHHHHHHCCCCcEEEEcccCcchHHHHHHHHHHhCCc--------------------
Confidence            4679999999      999999999999999999999999875   66778888776642                    


Q ss_pred             CCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhcc
Q 041824          194 LPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEG  229 (289)
Q Consensus       194 tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~  229 (289)
                      ++   |+|||+|++|||++++.++++.|+|+++|..
T Consensus        71 tv---P~v~i~g~~igG~~~l~~~~~~g~L~~~l~~  103 (598)
T 2x8g_A           71 TV---PQMFVRGKFIGDSQTVLKYYSNDELAGIVNE  103 (598)
T ss_dssp             CS---CEEEETTEEEECHHHHHHHHHTTCHHHHHHC
T ss_pred             ee---CEEEECCEEEEeeehhhhhhhcCcchhhccc
Confidence            45   9999999999999999999999999999965

>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}

Probab=99.43  E-value=1.7e-13  Score=103.14  Aligned_cols=68  Identities=19%  Similarity=0.213  Sum_probs=56.4

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCC-Ch----hHHHHHHHHHcccccccCCCCCcchhhccCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSM-DR----GFKEELRELMMRRRRRSSSSNNNEEEAESSV  191 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~-d~----~~reEL~~llg~~~~~~~~s~~~~~~g~~t~  191 (289)
                      +.+|+||+++      +|++|++++.+|+.+|++|+++||+. +.    +..++|.+..|..                  
T Consensus        11 M~~v~ly~~~------~Cp~C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~------------------   66 (92)
T 3ic4_A           11 MAEVLMYGLS------TCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSY------------------   66 (92)
T ss_dssp             CSSSEEEECT------TCHHHHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSS------------------
T ss_pred             CceEEEEECC------CChHHHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCC------------------
Confidence            5679999999      99999999999999999999999984 22    2346666665532                  


Q ss_pred             CCCCCCCCEEEECCeEEechHH
Q 041824          192 QPLPPVLPRVFVKGRYVGGAEE  213 (289)
Q Consensus       192 ~~tv~~LPqIFI~G~~IGG~de  213 (289)
                        ++   |+||+||++|||+++
T Consensus        67 --~v---P~l~~~g~~i~G~~~   83 (92)
T 3ic4_A           67 --SV---PVVVKGDKHVLGYNE   83 (92)
T ss_dssp             --CS---CEEEETTEEEESCCH
T ss_pred             --Cc---CEEEECCEEEeCCCH
Confidence              45   999999999999954

>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10

Probab=99.43  E-value=4e-13  Score=117.84  Aligned_cols=84  Identities=20%  Similarity=0.396  Sum_probs=68.6

Q ss_pred             HHHHHhhhcCCCCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCC
Q 041824          103 SVLERFERICPPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNN  182 (289)
Q Consensus       103 ~~l~~f~~~~pp~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~  182 (289)
                      +.|+.....  ...+..|+||+++      +|++|++||++|+.+||+|+++||..++. +++|+++.|..         
T Consensus       157 ~il~~l~~~--~i~~~~i~ly~~~------~Cp~C~~a~~~L~~~~i~~~~~~i~~~~~-~~~l~~~~g~~---------  218 (241)
T 1nm3_A          157 TMLKYLAPQ--HQVQESISIFTKP------GCPFCAKAKQLLHDKGLSFEEIILGHDAT-IVSVRAVSGRT---------  218 (241)
T ss_dssp             HHHHHHCTT--SCCCCCEEEEECS------SCHHHHHHHHHHHHHTCCCEEEETTTTCC-HHHHHHHTCCS---------
T ss_pred             HHHHHhhhh--ccccceEEEEECC------CChHHHHHHHHHHHcCCceEEEECCCchH-HHHHHHHhCCC---------
Confidence            444444433  2467789999999      99999999999999999999999998754 57888876643         


Q ss_pred             cchhhccCCCCCCCCCCEEEECCeEEechHHHHHHH
Q 041824          183 NEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       183 ~~~~g~~t~~~tv~~LPqIFI~G~~IGG~del~~L~  218 (289)
                                 ++   |+|||||++|||++++.++.
T Consensus       219 -----------~v---P~~~~~g~~i~g~~~i~~~l  240 (241)
T 1nm3_A          219 -----------TV---PQVFIGGKHIGGSDDLEKYF  240 (241)
T ss_dssp             -----------SS---CEEEETTEEEESHHHHHHC-
T ss_pred             -----------Cc---CEEEECCEEEECHHHHHHHh
Confidence                       45   99999999999999998764

>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A

Probab=99.30  E-value=1.7e-11  Score=94.96  Aligned_cols=87  Identities=18%  Similarity=0.363  Sum_probs=73.1

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh---HHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG---FKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~---~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      .+.|++|+++      +|++|++++.+|+.+++.|..+||+.+..   .+.++.+..|.                     
T Consensus        19 ~~~vv~f~a~------~C~~C~~~~~~l~~~~~~~~~v~v~~~~~~~~~~~~l~~~~~v---------------------   71 (116)
T 2e7p_A           19 SAPVVVFSKT------YCGYCNRVKQLLTQVGASYKVVELDELSDGSQLQSALAHWTGR---------------------   71 (116)
T ss_dssp             SSSEEEEECT------TCHHHHHHHHHHHHHTCCCEEEEGGGSTTHHHHHHHHHHHHSC---------------------
T ss_pred             CCCEEEEECC------CChhHHHHHHHHHHcCCCeEEEEccCCCChHHHHHHHHHHhCC---------------------
Confidence            3579999999      99999999999999999999999987654   34455555543                     


Q ss_pred             CCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCCC
Q 041824          194 LPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPI  232 (289)
Q Consensus       194 tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~  232 (289)
                        ..+|++|++|+.|||++.+..++..++|.++|+.+..
T Consensus        72 --~~~Pt~~~~g~~v~~~~~~~~~~~~~~l~~~l~~~g~  108 (116)
T 2e7p_A           72 --GTVPNVFIGGKQIGGCDTVVEKHQRNELLPLLQDAAA  108 (116)
T ss_dssp             --CSSCEEEETTEEEECHHHHHHHHHTTCHHHHHHHTTC
T ss_pred             --CCcCEEEECCEEECChHHHHHHHhCChHHHHHHHccc
Confidence              2349999999999999999999999999999987654

>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1

Probab=99.30  E-value=6.1e-12  Score=92.10  Aligned_cols=75  Identities=24%  Similarity=0.248  Sum_probs=60.8

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +|++|+++      +|++|++++.+|+.++|+|.++||+.+++.++++++ .|.                       ..+
T Consensus         2 ~v~~f~~~------~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~-~g~-----------------------~~v   51 (81)
T 1h75_A            2 RITIYTRN------DCVQCHATKRAMENRGFDFEMINVDRVPEAAEALRA-QGF-----------------------RQL   51 (81)
T ss_dssp             CEEEEECT------TCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHH-TTC-----------------------CSS
T ss_pred             EEEEEcCC------CChhHHHHHHHHHHCCCCeEEEECCCCHHHHHHHHH-hCC-----------------------Ccc
Confidence            58999999      999999999999999999999999998877776664 332                       234


Q ss_pred             CEEEECCeEEechHHHHHHHHhCcHHHHhccC
Q 041824          199 PRVFVKGRYVGGAEEVLRIVEEGWFGELIEGI  230 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E~G~L~~lL~~~  230 (289)
                      |+||+||+++||++.       .+|+++|+.+
T Consensus        52 P~~~~~g~~~~g~~~-------~~l~~~l~~~   76 (81)
T 1h75_A           52 PVVIAGDLSWSGFRP-------DMINRLHPAP   76 (81)
T ss_dssp             CEEEETTEEEESCCH-------HHHGGGSCCC
T ss_pred             CEEEECCEEEecCCH-------HHHHHHHhcc
Confidence            999999999999863       2356666543

>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1

Probab=99.29  E-value=1.5e-11  Score=88.14  Aligned_cols=65  Identities=23%  Similarity=0.367  Sum_probs=55.6

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +|++|+++      +|++|++++.+|+.+||+|+++||+.+++.+++++. .|..                    ++   
T Consensus         2 ~i~~y~~~------~C~~C~~~~~~l~~~~i~~~~~di~~~~~~~~~~~~-~~~~--------------------~v---   51 (75)
T 1r7h_A            2 SITLYTKP------ACVQCTATKKALDRAGLAYNTVDISLDDEARDYVMA-LGYV--------------------QA---   51 (75)
T ss_dssp             CEEEEECT------TCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHH-TTCB--------------------CC---
T ss_pred             eEEEEeCC------CChHHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHH-cCCC--------------------cc---
Confidence            58999999      999999999999999999999999998877777743 3322                    34   


Q ss_pred             CEEEECCeEEechHH
Q 041824          199 PRVFVKGRYVGGAEE  213 (289)
Q Consensus       199 PqIFI~G~~IGG~de  213 (289)
                      |++++||+++||++.
T Consensus        52 P~l~~~g~~~~g~~~   66 (75)
T 1r7h_A           52 PVVEVDGEHWSGFRP   66 (75)
T ss_dssp             CEEEETTEEEESCCH
T ss_pred             CEEEECCeEEcCCCH
Confidence            999999999999864

>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}

Probab=98.96  E-value=3.7e-10  Score=83.27  Aligned_cols=71  Identities=13%  Similarity=0.157  Sum_probs=54.3

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHH----HHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKS----VIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~----iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      .+|++|+++      +|++|++++.    +++.++++|+++||+.|.+..+ +.+..|.+                    
T Consensus         2 ~~~~~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~gv~--------------------   54 (80)
T 2k8s_A            2 ASKAIFYHA------GCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIA-EAEKAGVK--------------------   54 (80)
T ss_dssp             CEEEEEEEC------SCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHH-HHHHHTCC--------------------
T ss_pred             cceEEEeCC------CCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHH-HHHHcCCC--------------------
Confidence            469999999      9999999999    6777899999999987533333 33444532                    


Q ss_pred             CCCCCCEEEECCe--EEechHHHHHHH
Q 041824          194 LPPVLPRVFVKGR--YVGGAEEVLRIV  218 (289)
Q Consensus       194 tv~~LPqIFI~G~--~IGG~del~~L~  218 (289)
                         ++|+|||||+  ++|+..+..+|.
T Consensus        55 ---~vPt~~i~g~~~~~G~~~~~~~l~   78 (80)
T 2k8s_A           55 ---SVPALVIDGAAFHINFGAGIDDLK   78 (80)
T ss_dssp             ---EEEEEEETTEEEEEEEEEEHHHHC
T ss_pred             ---cCCEEEECCEEEEeccCcCHHHhh
Confidence               3499999999  889876665553

>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1

Probab=98.94  E-value=1.2e-09  Score=84.99  Aligned_cols=75  Identities=13%  Similarity=0.216  Sum_probs=57.8

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHH--hCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIE--NFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~--~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      +..|++|+++      +|++|++++.+|+  ..+|+|.++||+. ++. ++|.+..| .                    +
T Consensus        16 ~~~v~~f~~~------~C~~C~~~~~~L~~l~~~i~~~~vdi~~-~~~-~el~~~~g-~--------------------~   66 (100)
T 1wjk_A           16 LPVLTLFTKA------PCPLCDEAKEVLQPYKDRFILQEVDITL-PEN-STWYERYK-F--------------------D   66 (100)
T ss_dssp             CCEEEEEECS------SCHHHHHHHHHTSTTSSSSEEEEEETTS-STT-HHHHHHSS-S--------------------S
T ss_pred             CCEEEEEeCC------CCcchHHHHHHHHHhhhCCeEEEEECCC-cch-HHHHHHHC-C--------------------C
Confidence            4469999999      9999999999999  6789999999982 222 56666655 4                    4


Q ss_pred             CCCCCEEEECCeE--EechHHHHHHHHhCcHHHHhccC
Q 041824          195 PPVLPRVFVKGRY--VGGAEEVLRIVEEGWFGELIEGI  230 (289)
Q Consensus       195 v~~LPqIFI~G~~--IGG~del~~L~E~G~L~~lL~~~  230 (289)
                      +   |+||+||+.  +||++.       .+|+++|+.+
T Consensus        67 v---P~l~~~g~~~~~~g~~~-------~~l~~~l~~~   94 (100)
T 1wjk_A           67 I---PVFHLNGQFLMMHRVNT-------SKLEKQLRKL   94 (100)
T ss_dssp             C---SEEEESSSEEEESSCCH-------HHHHHHHHSS
T ss_pred             C---CEEEECCEEEEecCCCH-------HHHHHHHHHH
Confidence            5   999999998  888764       2466666543

>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A

Probab=98.80  E-value=1.7e-08  Score=77.72  Aligned_cols=59  Identities=14%  Similarity=0.124  Sum_probs=49.4

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCc-EEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVA-VSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~-y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +|++|+++      +|+.|+.++.+|+..++. |.++||+.+++    |.+..|.                     .+  
T Consensus         2 ~vv~f~a~------~C~~C~~~~~~L~~~~~~~~~~vdid~~~~----l~~~~g~---------------------~v--   48 (87)
T 1ttz_A            2 ALTLYQRD------DCHLCDQAVEALAQARAGAFFSVFIDDDAA----LESAYGL---------------------RV--   48 (87)
T ss_dssp             CEEEEECS------SCHHHHHHHHHHHHTTCCCEEEEECTTCHH----HHHHHTT---------------------TC--
T ss_pred             EEEEEECC------CCchHHHHHHHHHHHHHhheEEEECCCCHH----HHHHhCC---------------------Cc--
Confidence            59999999      999999999999999997 99999998875    4444442                     24  


Q ss_pred             CCEEE-ECCeEEech
Q 041824          198 LPRVF-VKGRYVGGA  211 (289)
Q Consensus       198 LPqIF-I~G~~IGG~  211 (289)
                       |+|+ +||+.++|.
T Consensus        49 -Ptl~~~~G~~v~g~   62 (87)
T 1ttz_A           49 -PVLRDPMGRELDWP   62 (87)
T ss_dssp             -SEEECTTCCEEESC
T ss_pred             -CeEEEECCEEEeCC
Confidence             9999 899999754

>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}

Probab=98.76  E-value=1.3e-08  Score=81.96  Aligned_cols=61  Identities=10%  Similarity=0.122  Sum_probs=50.2

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHh----CCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIEN----FGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQ  192 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~  192 (289)
                      +..|++|+++      +|++|++++.+|+.    ++|+|.++||+.|++.    .+..|.                    
T Consensus        29 m~~vv~y~~~------~C~~C~~a~~~L~~l~~e~~i~~~~vDId~d~~l----~~~ygv--------------------   78 (107)
T 2fgx_A           29 PRKLVVYGRE------GCHLCEEMIASLRVLQKKSWFELEVINIDGNEHL----TRLYND--------------------   78 (107)
T ss_dssp             CCCEEEEECS------SCHHHHHHHHHHHHHHHHSCCCCEEEETTTCHHH----HHHSTT--------------------
T ss_pred             ccEEEEEeCC------CChhHHHHHHHHHHHHHhcCCeEEEEECCCCHHH----HHHhCC--------------------
Confidence            5679999999      99999999999998    8999999999988653    333332                    


Q ss_pred             CCCCCCCEE--EECCeEE--ech
Q 041824          193 PLPPVLPRV--FVKGRYV--GGA  211 (289)
Q Consensus       193 ~tv~~LPqI--FI~G~~I--GG~  211 (289)
                       .   +|+|  |+||+.+  |++
T Consensus        79 -~---VP~l~~~~dG~~v~~g~~   97 (107)
T 2fgx_A           79 -R---VPVLFAVNEDKELCHYFL   97 (107)
T ss_dssp             -S---CSEEEETTTTEEEECSSC
T ss_pred             -C---CceEEEEECCEEEEecCC
Confidence             2   4999  9999988  544

>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A

Probab=98.66  E-value=3.6e-08  Score=80.84  Aligned_cols=47  Identities=19%  Similarity=0.457  Sum_probs=43.2

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      .|+||+++      +|++|++|+++|+.+||+|+++||..++..+++|+++++
T Consensus         2 mi~lY~~~------~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~el~~~l~   48 (132)
T 1z3e_A            2 MVTLYTSP------SCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILR   48 (132)
T ss_dssp             CEEEEECT------TCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHH
T ss_pred             eEEEEeCC------CChHHHHHHHHHHHcCCceEEEEccCCCccHHHHHHHHH
Confidence            38999999      999999999999999999999999998877888888764

>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12

Probab=98.66  E-value=3.1e-08  Score=79.32  Aligned_cols=47  Identities=15%  Similarity=0.103  Sum_probs=38.4

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh---hHHHHHHHHHc
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR---GFKEELRELMM  171 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~---~~reEL~~llg  171 (289)
                      .|+||+++      +|++|++|+++|+.+||+|+++||..++   +..+++.+.+|
T Consensus         1 ~i~iY~~~------~C~~C~kak~~L~~~gi~~~~~di~~~~~~~~~l~~~~~~~g   50 (114)
T 1rw1_A            1 TYVLYGIK------ACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWCAEHG   50 (114)
T ss_dssp             CEEEEECS------SCHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHHHHHHC
T ss_pred             CEEEEECC------CChHHHHHHHHHHHCCCceEEEeecCCCCCHHHHHHHHHhCC
Confidence            38999999      9999999999999999999999998655   44444444444

>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}

Probab=98.62  E-value=6.1e-08  Score=78.22  Aligned_cols=47  Identities=17%  Similarity=0.253  Sum_probs=38.4

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh---hHHHHHHHHHc
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR---GFKEELRELMM  171 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~---~~reEL~~llg  171 (289)
                      .|+||+++      +|++|++|+++|+++||+|+++||..++   +..+++.+.+|
T Consensus         6 ~i~iY~~~------~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~~l~~~~~~~g   55 (120)
T 2kok_A            6 SVTIYGIK------NCDTMKKARIWLEDHGIDYTFHDYKKEGLDAETLDRFLKTVP   55 (120)
T ss_dssp             CEEEEECS------SCHHHHHHHHHHHHHTCCEEEEEHHHHCCCHHHHHHHHHHSC
T ss_pred             EEEEEECC------CChHHHHHHHHHHHcCCcEEEEeeeCCCCCHHHHHHHHHHcC
Confidence            59999999      9999999999999999999999998655   33334444444

>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19

Probab=98.35  E-value=5.8e-07  Score=83.22  Aligned_cols=67  Identities=19%  Similarity=0.285  Sum_probs=46.7

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhC----CC---cEE--EEE--cCCChhHHH-------HHHHHHcccccccCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENF----GV---AVS--ERD--VSMDRGFKE-------ELRELMMRRRRRSSS  179 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~----gV---~y~--ErD--Vs~d~~~re-------EL~~llg~~~~~~~~  179 (289)
                      ..|.|||+.      +|++|.+|+++|+.+    +|   .|+  ++|  ...|+..+.       ++.+..|.       
T Consensus        44 ~~VelyTs~------gCp~C~~Ak~lL~~~~~~~~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~-------  110 (270)
T 2axo_A           44 GVVELFTSQ------GCASCPPADEALRKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGR-------  110 (270)
T ss_dssp             CEEEEEECT------TCTTCHHHHHHHHHHHHHTSSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTC-------
T ss_pred             cEEEEEeCC------CCCChHHHHHHHHHhhccCCeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCC-------
Confidence            579999999      999999999999998    87   555  222  113332222       23333332       


Q ss_pred             CCCcchhhccCCCCCCCCC--CEEEECCe-EEechHH
Q 041824          180 SNNNEEEAESSVQPLPPVL--PRVFVKGR-YVGGAEE  213 (289)
Q Consensus       180 s~~~~~~g~~t~~~tv~~L--PqIFI~G~-~IGG~de  213 (289)
                                      .++  |||||||+ ++||+|.
T Consensus       111 ----------------~tVyTPqI~Ing~~~v~G~d~  131 (270)
T 2axo_A          111 ----------------NGVYTPQAILNGRDHVKGADV  131 (270)
T ss_dssp             ----------------SCCCSSEEEETTTEEEETTCH
T ss_pred             ----------------CcccCCEEEECCEEeecCCCH
Confidence                            234  99999999 7999975

>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12

Probab=98.27  E-value=1e-06  Score=71.31  Aligned_cols=47  Identities=15%  Similarity=0.378  Sum_probs=43.7

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      |+||+++      +|++|++|+++|+++||+|+++||..++..++||+++++.
T Consensus         2 i~iY~~~------~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~l~~   48 (120)
T 3l78_A            2 VTLFLSP------SCTSCRKARAWLNRHDVVFQEHNIMTSPLSRDELLKILSY   48 (120)
T ss_dssp             EEEEECS------SCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHHH
T ss_pred             EEEEeCC------CCHHHHHHHHHHHHcCCCeEEEecccCCCcHHHHHHHHhh
Confidence            7899999      9999999999999999999999999988888899888763

>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}

Probab=98.26  E-value=5.1e-07  Score=73.53  Aligned_cols=50  Identities=16%  Similarity=0.222  Sum_probs=44.6

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      |..|+||+++      .|+.|++|+++|+.+||.|+++||..++..++||+++++.
T Consensus         4 M~~i~iY~~p------~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~   53 (121)
T 3rdw_A            4 MKDVTIYHNP------RCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQ   53 (121)
T ss_dssp             --CCEEECCT------TCHHHHHHHHHHHTTTCCCEEECTTTSCCCHHHHHHHHHH
T ss_pred             CCcEEEEECC------CCHHHHHHHHHHHHcCCCcEEEeeccCCCcHHHHHHHHHh
Confidence            5679999999      9999999999999999999999999988888888887754

>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A

Probab=98.24  E-value=6.3e-07  Score=74.95  Aligned_cols=49  Identities=16%  Similarity=0.207  Sum_probs=43.3

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      ..|+||+++      +|++|++|+++|+.+||.|+++||..++..++||+++++.
T Consensus         2 ~~itiY~~p------~C~~crkak~~L~~~gi~~~~idi~~~~~~~~eL~~~~~~   50 (141)
T 1s3c_A            2 SNITIYHNP------ASGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIAD   50 (141)
T ss_dssp             -CCEEECCT------TCHHHHHHHHHHHHTTCCCEEECTTTSCCCHHHHHHHHHH
T ss_pred             CcEEEEECC------CChHHHHHHHHHHHcCCCEEEEECCCCCccHHHHHHHhcc
Confidence            468999999      9999999999999999999999999887778888776653

>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0

Probab=98.21  E-value=1.3e-06  Score=71.07  Aligned_cols=48  Identities=19%  Similarity=0.237  Sum_probs=44.4

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      .|+||+++      .|+.|++|+++|+.+||.|+++||..++..++||.++++.
T Consensus         5 ~i~iY~~p------~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~   52 (120)
T 3gkx_A            5 KTLFLQYP------ACSTCQKAKKWLIENNIEYTNRLIVDDNPTVEELKAWIPL   52 (120)
T ss_dssp             CCEEEECT------TCHHHHHHHHHHHHTTCCCEEEETTTTCCCHHHHHHHHHH
T ss_pred             EEEEEECC------CChHHHHHHHHHHHcCCceEEEecccCcCCHHHHHHHHHH
Confidence            48999999      9999999999999999999999999998888898888764

>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0

Probab=98.17  E-value=1.8e-06  Score=70.16  Aligned_cols=47  Identities=13%  Similarity=0.296  Sum_probs=44.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      |+||+++      .|+.|++|+++|+.+||.|+++||..++-.++||+++++.
T Consensus         5 i~iY~~~------~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~   51 (120)
T 3fz4_A            5 LTFYEYP------KCSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLEN   51 (120)
T ss_dssp             EEEEECS------SCHHHHHHHHHHHHHTCCEEEEETTTSCCCHHHHHHHHHH
T ss_pred             EEEEeCC------CChHHHHHHHHHHHcCCceEEEEeccCchhHHHHHHHHHH
Confidence            8999999      9999999999999999999999999998888899888764

>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}

Probab=97.97  E-value=2.1e-06  Score=69.72  Aligned_cols=48  Identities=25%  Similarity=0.307  Sum_probs=43.1

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      .|+||+++      .|+.|++|+++|+.+||+|+++||..++-.++||++++..
T Consensus         5 ~i~iY~~p------~C~~c~ka~~~L~~~gi~~~~~di~~~~~t~~eL~~~l~~   52 (119)
T 3f0i_A            5 SVVIYHNP------KCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQ   52 (119)
T ss_dssp             CCEEECCT------TCHHHHHHHHHHHHTTCCCEEECHHHHCCCHHHHHHHHHH
T ss_pred             EEEEEECC------CChHHHHHHHHHHHcCCceEEEEeccCcCcHHHHHHHHHH
Confidence            58999999      9999999999999999999999999877777888877654

>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1

Probab=97.80  E-value=1.1e-05  Score=57.80  Aligned_cols=68  Identities=22%  Similarity=0.367  Sum_probs=48.7

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESS  190 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t  190 (289)
                      +..|++|+++      +|++|+++...|+..      ++.|..+|++.+++.    .+..|                   
T Consensus         2 m~~vv~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~----~~~~~-------------------   52 (85)
T 1nho_A            2 VVNIEVFTSP------TCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREK----AIEYG-------------------   52 (85)
T ss_dssp             CCCEEEESCS------SSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGG----GGGTC-------------------
T ss_pred             eEEEEEEECC------CCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHH----HHhCC-------------------
Confidence            3468899999      999999999888762      689999999877532    22222                   


Q ss_pred             CCCCCCCCCEEEECCe--EEec--hHHHHHH
Q 041824          191 VQPLPPVLPRVFVKGR--YVGG--AEEVLRI  217 (289)
Q Consensus       191 ~~~tv~~LPqIFI~G~--~IGG--~del~~L  217 (289)
                          +..+|.++++|+  ++|.  .+++.++
T Consensus        53 ----v~~~Pt~~~~G~~~~~G~~~~~~l~~~   79 (85)
T 1nho_A           53 ----LMAVPAIAINGVVRFVGAPSREELFEA   79 (85)
T ss_dssp             ----SSCSSEEEETTTEEEECSSCCHHHHHH
T ss_pred             ----ceeeCEEEECCEEEEccCCCHHHHHHH
Confidence                234599999998  6775  3555443

>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}

Probab=97.64  E-value=4.2e-05  Score=59.79  Aligned_cols=69  Identities=13%  Similarity=0.065  Sum_probs=50.1

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh--HHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG--FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~--~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      .||.|+++      +|++|++++.+|+...-.|..+|++.+..  ...++.+..+.                       .
T Consensus        15 ~vV~F~A~------WC~~C~~~~p~~~~~a~~~~~v~~~~~~~~~~~~~l~~~~~V-----------------------~   65 (106)
T 3kp8_A           15 GGTMYGAY------WCPHCQDQKELFGAAFDQVPYVECSPNGPGTPQAQECTEAGI-----------------------T   65 (106)
T ss_dssp             TCEEEECT------TCHHHHHHHHHHGGGGGGSCEEESCTTCTTSCCCHHHHHTTC-----------------------C
T ss_pred             EEEEEECC------CCHHHHHHHHHHHHHHHhCCEEEEecccccchhHHHHHHcCC-----------------------e
Confidence            38899999      99999999999998877777888874422  22344444443                       3


Q ss_pred             CCCEEEECCeEEechHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLR  216 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~  216 (289)
                      .+|.++|+|+.+.|..+..+
T Consensus        66 ~~PT~~i~G~~~~G~~~~~~   85 (106)
T 3kp8_A           66 SYPTWIINGRTYTGVRSLEA   85 (106)
T ss_dssp             SSSEEEETTEEEESCCCHHH
T ss_pred             EeCEEEECCEEecCCCCHHH
Confidence            44999999998877655443

>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1

Probab=97.56  E-value=1.7e-05  Score=56.76  Aligned_cols=37  Identities=30%  Similarity=0.442  Sum_probs=30.4

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCCh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDR  160 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~  160 (289)
                      -.|++|+++      +|++|+++...|+.    +  ++.|..+|++.++
T Consensus         4 ~~vv~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~   46 (85)
T 1fo5_A            4 VKIELFTSP------MCPHCPAAKRVVEEVANEMPDAVEVEYINVMENP   46 (85)
T ss_dssp             EEEEEEECC------CSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSC
T ss_pred             eEEEEEeCC------CCCchHHHHHHHHHHHHHcCCceEEEEEECCCCH
Confidence            358889998      99999999888876    2  6888899998765

>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A

Probab=97.50  E-value=0.00032  Score=59.23  Aligned_cols=72  Identities=14%  Similarity=0.235  Sum_probs=56.6

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +++.||+..      .|++|.+++.+|+.+||+|+.++|+.....  +..++.+.                    .++  
T Consensus         2 ~~~~Ly~~~------~sp~~~~v~~~l~~~gi~~~~~~v~~~~~~--~~~~~~p~--------------------~~v--   51 (218)
T 3ir4_A            2 NAMKLYIYD------HCPFCVKARMIFGLKNIPVELNVLQNDDEA--TPTRMIGQ--------------------KMV--   51 (218)
T ss_dssp             CCCEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTTCCH--HHHHHHSS--------------------SCS--
T ss_pred             CeEEEEcCC------CCchHHHHHHHHHHcCCceEEEECCCcchh--hhhhcCCC--------------------cee--
Confidence            468999999      999999999999999999999999875432  22333332                    145  


Q ss_pred             CCEEE-ECCeEEechHHHHHHHHh
Q 041824          198 LPRVF-VKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       198 LPqIF-I~G~~IGG~del~~L~E~  220 (289)
                       |.|. .||..|.....+.+..++
T Consensus        52 -P~l~~~~g~~l~eS~aI~~yL~~   74 (218)
T 3ir4_A           52 -PILQKDDSRYLPESMDIVHYVDN   74 (218)
T ss_dssp             -CEEECTTSCEEECHHHHHHHHHH
T ss_pred             -eeEEEeCCeEeeCHHHHHHHHHH
Confidence             9999 899999999888876554

>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}

Probab=97.47  E-value=6.6e-05  Score=69.82  Aligned_cols=70  Identities=13%  Similarity=0.080  Sum_probs=50.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC-h-hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD-R-GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d-~-~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      .||+|+.+      +|++|++++.+|++..-.+..+|++.+ . +...++.+..+.                       .
T Consensus       200 ~vV~F~A~------WC~~Ck~l~p~le~lA~~l~~Vd~d~~d~~~~~~~la~~~gI-----------------------~  250 (291)
T 3kp9_A          200 GGTMYGAY------WCPHCQDQKELFGAAFDQVPYVECSPNGPGTPQAQECTEAGI-----------------------T  250 (291)
T ss_dssp             TCEEEECT------TCHHHHHHHHHHGGGGGGSCEEESCSSCSSSCCCHHHHTTTC-----------------------C
T ss_pred             CEEEEECC------CCHHHHHHHHHHHHHHHHcCEEEEeecCchhhHHHHHHHcCC-----------------------c
Confidence            48999999      999999999999987655566777632 1 213344444333                       3


Q ss_pred             CCCEEEECCeEEechHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRI  217 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L  217 (289)
                      .+|++|+||+.+.|..+..+|
T Consensus       251 ~vPT~~i~G~~~~G~~~~~~L  271 (291)
T 3kp9_A          251 SYPTWIINGRTYTGVRSLEAL  271 (291)
T ss_dssp             STTEEEETTEEEESCCCHHHH
T ss_pred             ccCeEEECCEEecCCCCHHHH
Confidence            449999999999998766543

>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A

Probab=97.35  E-value=0.00041  Score=61.78  Aligned_cols=83  Identities=16%  Similarity=0.165  Sum_probs=57.1

Q ss_pred             CCCCCcEEEEEecCCC--CCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCC
Q 041824          114 PDGENKVVIYTTTLRG--IRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSV  191 (289)
Q Consensus       114 p~~~~kVVVYttSLrg--vR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~  191 (289)
                      |..+..|+||.+..+.  ....|++|.+|+.+|+.+||+|+.+.|+... ..+++.++...                   
T Consensus        13 ~~~~~~i~ly~~~~~~~~~~~~~p~~~rv~~~L~~~gi~ye~~~v~~~~-~~~~~~~~nP~-------------------   72 (267)
T 2ahe_A           13 EDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKR-KPADLQNLAPG-------------------   72 (267)
T ss_dssp             ---CCCEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEECTTS-CCHHHHHHSTT-------------------
T ss_pred             cccCCCEEEEEecCCCccCCCCCchHHHHHHHHHHcCCCCEEEEeCccc-ChHHHHHhCCC-------------------
Confidence            3567789999433210  1238999999999999999999998887531 12345544321                   


Q ss_pred             CCCCCCCCEEEECCeEEechHHHHHHHHh
Q 041824          192 QPLPPVLPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       192 ~~tv~~LPqIFI~G~~IGG~del~~L~E~  220 (289)
                       ..+   |.|..||..|.....+.++.++
T Consensus        73 -gkV---PvL~~~g~~l~ES~aI~~YL~~   97 (267)
T 2ahe_A           73 -THP---PFITFNSEVKTDVNKIEEFLEE   97 (267)
T ss_dssp             -CCS---CEEEETTEEECCHHHHHHHHHH
T ss_pred             -CCC---CEEEECCEEecCHHHHHHHHHH
Confidence             134   9999999999988888776543

>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*

Probab=97.29  E-value=0.00069  Score=59.08  Aligned_cols=73  Identities=16%  Similarity=0.229  Sum_probs=51.4

Q ss_pred             CCcEEEE--------EecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhc
Q 041824          117 ENKVVIY--------TTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAE  188 (289)
Q Consensus       117 ~~kVVVY--------ttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~  188 (289)
                      +..+.||        +..      .|++|.+|+.+|+.+||+|+.+.|+.. ...+++.++...                
T Consensus        11 ~~~i~ly~~~~~~~~~~~------~sp~~~rv~~~L~~~gi~ye~~~v~~~-~~~~~~~~~nP~----------------   67 (247)
T 2r4v_A           11 DPEIELFVKAGSDGESIG------NCPFCQRLFMILWLKGVKFNVTTVDMT-RKPEELKDLAPG----------------   67 (247)
T ss_dssp             CCCEEEEEEBCTTSSSBC------SCHHHHHHHHHHHHHTCCCEEEEECCC-----------CC----------------
T ss_pred             CCCEEEEEecCcccccCC------CChhHHHHHHHHHHcCCCcEEEEcCcc-cchHHHHHhCCC----------------
Confidence            4569999        555      999999999999999999999988754 122344443221                


Q ss_pred             cCCCCCCCCCCEEEECCeEEechHHHHHHHH
Q 041824          189 SSVQPLPPVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       189 ~t~~~tv~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                          ..+   |.|..||..|.....+.++.+
T Consensus        68 ----g~v---P~L~~~g~~l~ES~aI~~YL~   91 (247)
T 2r4v_A           68 ----TNP---PFLVYNKELKTDFIKIEEFLE   91 (247)
T ss_dssp             ----SSS---CEEEETTEEECCHHHHHHHHH
T ss_pred             ----CCC---CEEEECCEeccCHHHHHHHHH
Confidence                134   999999999988888877654

>2cz2_A Maleylacetoacetate isomerase; structural genomics, GST, GSTZ1-1, NPPSFA, national project protein structural and functional analyses; HET: GSH; 1.40A {Mus musculus} PDB: 2cz3_A 1fw1_A*

Probab=97.24  E-value=0.0014  Score=55.51  Aligned_cols=74  Identities=14%  Similarity=0.204  Sum_probs=57.1

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh----HHHHHHHHHcccccccCCCCCcchhhccCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG----FKEELRELMMRRRRRSSSSNNNEEEAESSVQ  192 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~----~reEL~~llg~~~~~~~~s~~~~~~g~~t~~  192 (289)
                      +.+++||+..      .|++|.+|+.+|+..||+|+.+.|+....    ..+++.++...                    
T Consensus        10 ~~~~~Ly~~~------~sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~e~~~~~~~~~nP~--------------------   63 (223)
T 2cz2_A           10 AGKPILYSYF------RSSCSWRVRIALALKGIDYEIVPINLIKDGGQQFTEEFQTLNPM--------------------   63 (223)
T ss_dssp             -CCCEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCSSGGGCGGGSHHHHHHCTT--------------------
T ss_pred             cCceEEEecC------CCChHHHHHHHHHhcCCCCeEEEeecccCchhhcCHHHhccCCC--------------------
Confidence            3569999998      89999999999999999999999986432    33455554321                    


Q ss_pred             CCCCCCCEEEECCeEEechHHHHHHHH
Q 041824          193 PLPPVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       193 ~tv~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                      ..+   |.+..||..|.....+.++.+
T Consensus        64 g~v---P~L~~~g~~l~eS~aI~~yL~   87 (223)
T 2cz2_A           64 KQV---PALKIDGITIVQSLAIMEYLE   87 (223)
T ss_dssp             CCS---CEEEETTEEEESHHHHHHHHH
T ss_pred             CCC---CEEEECCEEEeeHHHHHHHHH
Confidence            134   999999999998888877554

>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*

Probab=97.22  E-value=0.00087  Score=57.43  Aligned_cols=76  Identities=13%  Similarity=0.130  Sum_probs=57.9

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      +..+++++||+..      .|++|.+++.+|+..||+|+.+.|+... ..+++.++...                    .
T Consensus        18 ~~~~~~~~Ly~~~------~sp~~~~v~~~L~~~gi~ye~~~v~~~~-~~~~~~~~~P~--------------------g   70 (241)
T 3vln_A           18 PVPEGSIRIYSMR------FSPFAERTRLVLKAKGIRHEVININLKN-KPEWFFKKNPF--------------------G   70 (241)
T ss_dssp             CCCTTCEEEEECT------TCHHHHHHHHHHHHHTCCEEEEEBCTTS-CCTTHHHHCTT--------------------C
T ss_pred             CCCCCeEEEEcCC------CCcHHHHHHHHHHHcCCCCeEEecCccc-CCHHHHHhCCC--------------------C
Confidence            3456789999999      9999999999999999999999997642 12234444221                    1


Q ss_pred             CCCCCCEEEE-CCeEEechHHHHHHHH
Q 041824          194 LPPVLPRVFV-KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       194 tv~~LPqIFI-~G~~IGG~del~~L~E  219 (289)
                      .+   |.+.+ ||..|.....+.+..+
T Consensus        71 ~v---P~L~~~~g~~l~eS~aI~~yL~   94 (241)
T 3vln_A           71 LV---PVLENSQGQLIYESAITCEYLD   94 (241)
T ss_dssp             CS---CEEECTTCCEEESHHHHHHHHH
T ss_pred             CC---CEEEECCCcEEEcHHHHHHHHH
Confidence            34   99999 9999988888776544

>4hi7_A GI20122; GST, glutathione S-transferase, enzyme function initiative, structural genomics, unknown function; HET: GSH; 1.25A {Drosophila mojavensis}

Probab=97.16  E-value=0.0014  Score=55.86  Aligned_cols=74  Identities=11%  Similarity=0.104  Sum_probs=55.2

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC--hhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD--RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d--~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      |.|.|||...      .|++|++|+-+|+.+||+|+.+.|+..  ....+++.++...                    ..
T Consensus         1 M~kpiLY~~~------~Sp~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~nP~--------------------g~   54 (228)
T 4hi7_A            1 MVKPILYGID------ASPPVRAVKLTLAALQLPYDYKIVNLMNKEQHSEEYLKKNPQ--------------------HT   54 (228)
T ss_dssp             --CCEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHHHCTT--------------------CC
T ss_pred             CCceEEEECC------CChHHHHHHHHHHHhCCCCEEEEecCCCcccCCHHHHHhCCC--------------------Cc
Confidence            3466899999      999999999999999999998887653  2234455554321                    13


Q ss_pred             CCCCCEEEECCeEEechHHHHHHHH
Q 041824          195 PPVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       195 v~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                      +   |.+..||..|.....+.+..+
T Consensus        55 v---P~L~d~~~~l~eS~aI~~YL~   76 (228)
T 4hi7_A           55 V---PLLEDGDANIADSHAIMAYLV   76 (228)
T ss_dssp             S---CEEEETTEEEESHHHHHHHHH
T ss_pred             e---eeEEECCEEEechHHHHHHHH
Confidence            4   999999999998888777543

>1e6b_A Glutathione S-transferase; 1.65A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5

Probab=97.12  E-value=0.0021  Score=54.16  Aligned_cols=75  Identities=11%  Similarity=0.179  Sum_probs=56.4

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      +.++.||+..      .|++|.+|+.+|+..||+|+.+.|+...  ...+++.++...                    ..
T Consensus         6 ~~~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~--------------------g~   59 (221)
T 1e6b_A            6 EEKLKLYSYW------RSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPM--------------------GT   59 (221)
T ss_dssp             --CCEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCTTTTGGGCHHHHHHCTT--------------------CC
T ss_pred             CCCeEEEecC------CCCchHHHHHHHHHcCCCCEEEEecCCcccccCHHHHhhCCC--------------------CC
Confidence            4568999998      8999999999999999999999997532  233455554321                    13


Q ss_pred             CCCCCEEEECCeEEechHHHHHHHHh
Q 041824          195 PPVLPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       195 v~~LPqIFI~G~~IGG~del~~L~E~  220 (289)
                      +   |.+..||..|.....+.++.++
T Consensus        60 v---P~L~~~g~~l~eS~aI~~yL~~   82 (221)
T 1e6b_A           60 V---PALVDGDVVINDSFAIIMYLDE   82 (221)
T ss_dssp             S---SEEEETTEEEESHHHHHHHHHH
T ss_pred             C---CEEEECCEEEeeHHHHHHHHHH
Confidence            4   9999999999988888776543

>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}

Probab=97.10  E-value=0.0014  Score=55.00  Aligned_cols=70  Identities=11%  Similarity=0.179  Sum_probs=53.4

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      +.+|+..      +||+|++|+-+|+.+||+|+.+.|+.... .+++.++...                    ..+   |
T Consensus         4 m~LY~~~------~sP~~~rvr~~L~e~gi~~e~~~v~~~~~-~~~~~~~nP~--------------------g~v---P   53 (210)
T 4hoj_A            4 MTLYSGI------TCPFSHRCRFVLYEKGMDFEIKDIDIYNK-PEDLAVMNPY--------------------NQV---P   53 (210)
T ss_dssp             CEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTTSC-CHHHHHHCTT--------------------CCS---C
T ss_pred             EEEecCC------CChHHHHHHHHHHHcCCCCEEEEeCCCCC-CHHHHHHCCC--------------------CCC---c
Confidence            6799998      99999999999999999999988875321 2345544321                    134   9


Q ss_pred             EEEECCeEEechHHHHHHHH
Q 041824          200 RVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       200 qIFI~G~~IGG~del~~L~E  219 (289)
                      .+..||..|.....+.+..+
T Consensus        54 vL~~~~~~l~ES~aI~~yL~   73 (210)
T 4hoj_A           54 VLVERDLVLHESNIINEYID   73 (210)
T ss_dssp             EEEETTEEEESHHHHHHHHH
T ss_pred             EEEECCEEEeccHHHHHHHH
Confidence            99999999988877776544

>3qav_A RHO-class glutathione S-transferase; cytosol; 2.10A {Laternula elliptica} PDB: 3qaw_A*

Probab=97.10  E-value=0.0022  Score=55.37  Aligned_cols=77  Identities=18%  Similarity=0.172  Sum_probs=57.0

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCC
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSV  191 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~  191 (289)
                      +..+.++++|...      .|++|.+|+.+|+..||+|+.+.|+...  ...+++.++....                  
T Consensus        21 Ms~~~~~~Ly~~~------~sp~~~rv~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~nP~g------------------   76 (243)
T 3qav_A           21 MATTSKPFVYWGS------GSPPCWKVLLVLQEKKIDYDEKIISFSKKEHKSEEILELNPRG------------------   76 (243)
T ss_dssp             ----CCCEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCTTTTGGGSHHHHHHCTTC------------------
T ss_pred             ccccCccEEEeCC------CCcchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCCC------------------
Confidence            3445679999999      9999999999999999999999887532  2335555543221                  


Q ss_pred             CCCCCCCCEEEECCeEEechHHHHHHHH
Q 041824          192 QPLPPVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       192 ~~tv~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                        .+   |.+..||..|.....+.++.+
T Consensus        77 --~v---PvL~~~g~~l~eS~aI~~YL~   99 (243)
T 3qav_A           77 --QV---PTFTDGDVVVNESTAICMYLE   99 (243)
T ss_dssp             --CS---CEEEETTEEECSHHHHHHHHH
T ss_pred             --CC---CEEEECCEEEecHHHHHHHHH
Confidence              34   999999999988887776544

>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A {Bombyx mori}

Probab=97.09  E-value=0.0019  Score=56.03  Aligned_cols=73  Identities=12%  Similarity=0.112  Sum_probs=56.8

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      ..+++||+..      .|++|.+|+.+|+..||+|+.+.|+... ..+++.++...                       .
T Consensus        24 ~~~~~Ly~~~------~sp~~~~v~~~L~~~gi~ye~~~v~~~~-~~~~~~~~nP~-----------------------g   73 (246)
T 3rbt_A           24 TDKLRLYHVD------MNPYGHRVLLVLEAKRIKYEVYRLDPLR-LPEWFRAKNPR-----------------------L   73 (246)
T ss_dssp             CSSEEEEECT------TCHHHHHHHHHHHHTTBCEEEEECCSSS-CCHHHHHHCTT-----------------------C
T ss_pred             CCceEEEecC------CCccHHHHHHHHHHcCCCceEEEeCccc-CCHHHHHhCCC-----------------------C
Confidence            7789999999      9999999999999999999999997643 23345554322                       1


Q ss_pred             CCCEEEE-CCe---EEechHHHHHHHH
Q 041824          197 VLPRVFV-KGR---YVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI-~G~---~IGG~del~~L~E  219 (289)
                      .+|.|.+ ||.   .|.....+.+..+
T Consensus        74 ~vP~L~~~~g~~~~~l~eS~aI~~yL~  100 (246)
T 3rbt_A           74 KIPVLEIPTDQGDRFLFESVVICDYLD  100 (246)
T ss_dssp             BSCEEEECCTTSCEEECCHHHHHHHHH
T ss_pred             CCCEEEecCCCCceeeeCHHHHHHHHH
Confidence            3499999 888   8888877776544

>3fy7_A Chloride intracellular channel protein 3; GST, glutathione, CLIC, chloride channel, ION transport, ionic channel, nucleus, transport, gated channel; 1.95A {Homo sapiens} PDB: 3kjy_A

Probab=97.09  E-value=0.0019  Score=56.52  Aligned_cols=80  Identities=13%  Similarity=0.149  Sum_probs=52.2

Q ss_pred             CCCcEEEEEecCCC--CCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          116 GENKVVIYTTTLRG--IRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       116 ~~~kVVVYttSLrg--vR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      .+.+|.||.+.-+.  .-..||+|.+|+.+|+..||+|+.+.|+.. ...+++.++...                    .
T Consensus        22 ~~~~i~l~~ka~~~~~s~~~sP~~~rv~~~L~~~gi~ye~~~v~~~-~~~~~~~~~nP~--------------------g   80 (250)
T 3fy7_A           22 AETKLQLFVKASEDGESVGHCPSCQRLFMVLLLKGVPFTLTTVDTR-RSPDVLKDFAPG--------------------S   80 (250)
T ss_dssp             ---CEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEEC-----------------------------------C
T ss_pred             cCCCceEEEEeCCCCCCCCCChHHHHHHHHHHHcCCccEEEECCCc-cChHHHHhhCCC--------------------C
Confidence            35579999986442  225899999999999999999999888764 223345444321                    1


Q ss_pred             CCCCCCEEEECCeEEechHHHHHHHH
Q 041824          194 LPPVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       194 tv~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                      .+   |.+.+||..|.....+.+..+
T Consensus        81 ~V---PvL~~dg~~l~ES~aI~~YL~  103 (250)
T 3fy7_A           81 QL---PILLYDSDAKTDTLQIEDFLE  103 (250)
T ss_dssp             CS---CEEEETTEEECCHHHHHHHHH
T ss_pred             CC---CEEEECCEEecCHHHHHHHHH
Confidence            34   999999999998888877654

>1oyj_A Glutathione S-transferase; herbicide detoxification; HET: GSH; 1.95A {Oryza sativa} SCOP: a.45.1.1 c.47.1.5

Probab=97.09  E-value=0.0021  Score=54.95  Aligned_cols=75  Identities=13%  Similarity=0.137  Sum_probs=56.4

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      .+.+++||+..      .|++|.+|+.+|+.+||+|+.+.|+.. ...+++.++....                   ..+
T Consensus         3 ~~~~~~Ly~~~------~sp~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~nP~~-------------------g~v   56 (231)
T 1oyj_A            3 EEKELVLLDFW------VSPFGQRCRIAMAEKGLEFEYREEDLG-NKSDLLLRSNPVH-------------------RKI   56 (231)
T ss_dssp             CSCCEEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTT-SCCHHHHHHSTTT-------------------CCS
T ss_pred             CCCceEEEeCC------CChHHHHHHHHHHHCCCCCeEEecCcc-cCCHHHHhhCCCC-------------------CCC
Confidence            46789999998      999999999999999999999988753 1223444432210                   134


Q ss_pred             CCCCEEEECCeEEechHHHHHHHH
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                         |.+..||..|.....+.++.+
T Consensus        57 ---P~L~~~g~~l~eS~aI~~yL~   77 (231)
T 1oyj_A           57 ---PVLLHAGRPVSESLVILQYLD   77 (231)
T ss_dssp             ---CEEEETTEEEESHHHHHHHHH
T ss_pred             ---CEEEECCEEEecHHHHHHHHH
Confidence               999999999998888777554

>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}

Probab=97.07  E-value=0.0016  Score=57.43  Aligned_cols=57  Identities=9%  Similarity=0.060  Sum_probs=42.9

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh----------CCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN----------FGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEA  187 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~----------~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g  187 (289)
                      ..|++|+++      +|++|+++..+|+.          .+|.+..+|++.+++    +.+..+.               
T Consensus       140 ~~vv~F~a~------wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~----~~~~~~V---------------  194 (243)
T 2hls_A          140 VHIETIITP------SCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPD----IADKYGV---------------  194 (243)
T ss_dssp             EEEEEEECS------SCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHH----HHHHTTC---------------
T ss_pred             cEEEEEECC------CCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHH----HHHHcCC---------------
Confidence            346779998      99999999999876          478899999987653    3333332               


Q ss_pred             ccCCCCCCCCCCEEEECCeE
Q 041824          188 ESSVQPLPPVLPRVFVKGRY  207 (289)
Q Consensus       188 ~~t~~~tv~~LPqIFI~G~~  207 (289)
                              ..+|++||||+.
T Consensus       195 --------~~vPt~~i~G~~  206 (243)
T 2hls_A          195 --------MSVPSIAINGYL  206 (243)
T ss_dssp             --------CSSSEEEETTEE
T ss_pred             --------eeeCeEEECCEE
Confidence                    244999999984

>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A

Probab=97.07  E-value=0.00098  Score=64.96  Aligned_cols=75  Identities=17%  Similarity=0.202  Sum_probs=54.9

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESS  190 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t  190 (289)
                      +...|++|+++      +|++|+.+..+|+..     +|.|..+|++..+    ++.+..+..                 
T Consensus       117 ~~~~i~~f~a~------~C~~C~~~~~~l~~~a~~~~~v~~~~vd~~~~~----~~~~~~~i~-----------------  169 (521)
T 1hyu_A          117 GDFEFETYYSL------SCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQ----NEITERNVM-----------------  169 (521)
T ss_dssp             SCEEEEEEECT------TCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCH----HHHHHTTCC-----------------
T ss_pred             CCcceEEEECC------CCcCcHHHHHHHHHHHhHcCceEEEEEechhhH----HHHHHhCCC-----------------
Confidence            34569999999      999999998888753     5778888987553    455554432                 


Q ss_pred             CCCCCCCCCEEEECCeEEech----HHHHHHHHhCcH
Q 041824          191 VQPLPPVLPRVFVKGRYVGGA----EEVLRIVEEGWF  223 (289)
Q Consensus       191 ~~~tv~~LPqIFI~G~~IGG~----del~~L~E~G~L  223 (289)
                         ++   |++||||+.++.-    +++.++.+.+.+
T Consensus       170 ---sv---Pt~~i~g~~~~~G~~~~~~l~~~l~~~~~  200 (521)
T 1hyu_A          170 ---GV---PAVFVNGKEFGQGRMTLTEIVAKVDTGAE  200 (521)
T ss_dssp             ---SS---SEEEETTEEEEESCCCHHHHHHHHCCSSC
T ss_pred             ---cc---CEEEECCEEEecCCCCHHHHHHHHhhccc
Confidence               34   9999999988643    677777766643

>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A

Probab=97.03  E-value=0.0016  Score=49.53  Aligned_cols=59  Identities=20%  Similarity=0.374  Sum_probs=42.8

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQ  192 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~  192 (289)
                      ..||.|+++      +|++|+++...|+..     ++.|..+|++.+++    +.+..+.                    
T Consensus        21 ~~vv~f~a~------wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~----l~~~~~v--------------------   70 (110)
T 2l6c_A           21 DAIVFFHKN------LCPHCKNMEKVLDKFGARAPQVAISSVDSEARPE----LMKELGF--------------------   70 (110)
T ss_dssp             EEEEEEECS------SCSTHHHHHHHHHHHHTTCTTSCEEEEEGGGCHH----HHHHTTC--------------------
T ss_pred             CEEEEEECC------CCHhHHHHHHHHHHHHHHCCCcEEEEEcCcCCHH----HHHHcCC--------------------
Confidence            346777777      999999999988764     47788899876543    4444443                    


Q ss_pred             CCCCCCCEEEE--CCeEEe
Q 041824          193 PLPPVLPRVFV--KGRYVG  209 (289)
Q Consensus       193 ~tv~~LPqIFI--~G~~IG  209 (289)
                         ..+|.+++  +|+.+.
T Consensus        71 ---~~~Pt~~~~~~G~~v~   86 (110)
T 2l6c_A           71 ---ERVPTLVFIRDGKVAK   86 (110)
T ss_dssp             ---CSSCEEEEEESSSEEE
T ss_pred             ---cccCEEEEEECCEEEE
Confidence               23499888  998776

>4g10_A Glutathione S-transferase homolog; thioredoxin fold; HET: MSE GSH; 1.20A {Sphingomonas paucimobilis}

Probab=97.03  E-value=0.0018  Score=57.49  Aligned_cols=76  Identities=14%  Similarity=0.189  Sum_probs=53.9

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      ..+.++||...      .|++|++|+-+|+.+||+|+.+.|+....--+.+.....-.                   ..+
T Consensus         3 ~p~~~~LY~~~------~sP~~~rv~i~L~e~gi~ye~~~vd~~~~~pe~~~~~~nP~-------------------g~V   57 (265)
T 4g10_A            3 EPQELTIYHIP------GCPFSERVEIMLELKGLRMKDVEIDISKPRPDWLLAKTGGT-------------------TAL   57 (265)
T ss_dssp             CCCCCEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTTSCCCHHHHHHHTSC-------------------CCS
T ss_pred             CCCceEEEecC------CChHHHHHHHHHHHhCCCCEEEEeCCCCCCcHHHHHhcCCC-------------------Ccc
Confidence            45679999999      99999999999999999999888865321112232222211                   134


Q ss_pred             CCCCEEEE-CCeEEechHHHHHHHH
Q 041824          196 PVLPRVFV-KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       196 ~~LPqIFI-~G~~IGG~del~~L~E  219 (289)
                         |.|-+ ||..|-....|.++.+
T Consensus        58 ---PvL~~d~g~~l~ES~aI~~YL~   79 (265)
T 4g10_A           58 ---PLLDVENGESLKESMVILRYLE   79 (265)
T ss_dssp             ---CEEECTTSCEEECHHHHHHHHH
T ss_pred             ---ceEEECCCeEEeccHHHHHHHh
Confidence               99987 7788887777776543

>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A

Probab=97.02  E-value=0.0014  Score=55.14  Aligned_cols=71  Identities=13%  Similarity=0.127  Sum_probs=53.6

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      ++.||...      .|++|.+|+.+|+..||+|+.+.|+.. ...+++.++....                    .+   
T Consensus         8 ~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~~P~g--------------------~v---   57 (215)
T 3lyp_A            8 RLACYSDP------ADHYSHRVRIVLAEKGVSAEIISVEAG-RQPPKLIEVNPYG--------------------SL---   57 (215)
T ss_dssp             CCEEEECT------TCHHHHHHHHHHHHHTCCCEEEECC----CCHHHHHHCTTC--------------------CS---
T ss_pred             CeEEEeCC------CCchHHHHHHHHHHCCCCcEEEecCcc-cccHHHHHHCCCC--------------------Cc---
Confidence            78999999      999999999999999999999998754 2234555543221                    34   


Q ss_pred             CEEEECCeEEechHHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E  219 (289)
                      |.|..||..|.....+.+..+
T Consensus        58 P~L~~~g~~l~eS~aI~~yL~   78 (215)
T 3lyp_A           58 PTLVDRDLALWESTVVMEYLD   78 (215)
T ss_dssp             SEEECC-CEEESHHHHHHHHH
T ss_pred             CeEEECCEEeecHHHHHHHHH
Confidence            999999999998888776554

>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET: CIT; 2.02A {Yersinia pestis}

Probab=97.00  E-value=0.0024  Score=53.81  Aligned_cols=72  Identities=14%  Similarity=0.207  Sum_probs=55.6

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      ..++||+..      .|++|.+|+.+|+..||+|+.+.|+.+ ...+++.++...                    ..+  
T Consensus         9 ~~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~~P~--------------------g~v--   59 (213)
T 1yy7_A            9 SVMTLFSGP------TDIFSHQVRIVLAEKGVSVEIEQVEAD-NLPQDLIDLNPY--------------------RTV--   59 (213)
T ss_dssp             SSEEEEECT------TCHHHHHHHHHHHHHTCCEEEEECCTT-SCCHHHHHHCTT--------------------CCS--
T ss_pred             CceEEEcCC------CChhHHHHHHHHHHcCCCCeEEeCCcc-cCcHHHHHHCCC--------------------CCC--
Confidence            458999998      899999999999999999999999753 122445544321                    134  


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                       |.+..||..|.....+.++.+
T Consensus        60 -P~L~~~g~~l~eS~aI~~yL~   80 (213)
T 1yy7_A           60 -PTLVDRELTLYESRIIMEYLD   80 (213)
T ss_dssp             -SEEEETTEEEESHHHHHHHHH
T ss_pred             -CEEEECCEEEecHHHHHHHHH
Confidence             999999999998888877654

>2a2r_A Glutathione S-transferase P; detoxification, nitric oxide carrier, S- nitrosoglutathione; HET: MES GSN; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 11gs_A* 12gs_A* 14gs_A* 16gs_A* 18gs_A* 21gs_A* 13gs_A* 2a2s_A* 3dd3_A* 3dgq_A* 3n9j_A* 3pgt_A* 1pgt_A* 2pgt_A* 4pgt_A* 22gs_A* 17gs_A* 3gus_A* 10gs_A* 1aqv_A* ...

Probab=97.00  E-value=0.0026  Score=53.28  Aligned_cols=73  Identities=12%  Similarity=0.121  Sum_probs=54.9

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .+++||+..      .|++|.+|+.+|+..||+|+.+.|+......+++++....                    ..+  
T Consensus         2 ~~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~P~--------------------g~v--   53 (210)
T 2a2r_A            2 PPYTVVYFP------VRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLY--------------------GQL--   53 (210)
T ss_dssp             CSEEEEECS------SSGGGHHHHHHHHHTTCCEEEEECCHHHHHHSHHHHHSTT--------------------SCS--
T ss_pred             CceEEEEeC------CcchHHHHHHHHHHcCCCceEEEecHHhhchhhccCCCCC--------------------CCC--
Confidence            468899988      8999999999999999999999997532112344443221                    134  


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                       |.+..||..|.....+.+..+
T Consensus        54 -P~L~~~g~~l~eS~aI~~yL~   74 (210)
T 2a2r_A           54 -PKFQDGDLTLYQSNTILRHLG   74 (210)
T ss_dssp             -CEEEETTEEEECHHHHHHHHH
T ss_pred             -CEEEECCEEEeeHHHHHHHHH
Confidence             999999999998888777554

>2v6k_A Maleylpyruvate isomerase; glutathione-S-transferase, GST, plasmid, bacterial, biodegradation, fumaryl pyruvate; HET: TGG; 1.3A {Ralstonia SP} PDB: 2jl4_A*

Probab=96.97  E-value=0.0024  Score=53.25  Aligned_cols=72  Identities=14%  Similarity=0.194  Sum_probs=54.9

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      ++.||+..      .|++|.+|+.+|+..||+|+.+.|+...  ...+++.++...                    ..+ 
T Consensus         2 ~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~--------------------g~v-   54 (214)
T 2v6k_A            2 KMKLYNFW------RSGTSHRLRIALNLKGVPYEYLAVHLGKEEHLKDAFKALNPQ--------------------QLV-   54 (214)
T ss_dssp             CCEEEECS------SCHHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHHHCTT--------------------CCS-
T ss_pred             eeEEEecC------CCCcHHHHHHHHHHCCCCceEEecCCCcccccCHHHHhcCCC--------------------CcC-
Confidence            57899988      8999999999999999999999887642  223455554321                    134 


Q ss_pred             CCCEEEECCeEEechHHHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E  219 (289)
                        |.+..||..|.....+.+..+
T Consensus        55 --P~L~~~g~~l~eS~aI~~yL~   75 (214)
T 2v6k_A           55 --PALDTGAQVLIQSPAIIEWLE   75 (214)
T ss_dssp             --CEEECSSCEEECHHHHHHHHH
T ss_pred             --CEEEECCEEEecHHHHHHHHH
Confidence              999888889998888877554

>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase, dehydroascorbate reductase, reductase; 1.70A {Homo sapiens} PDB: 3q19_A* 3qag_A*

Probab=96.96  E-value=0.0014  Score=56.24  Aligned_cols=76  Identities=9%  Similarity=0.059  Sum_probs=55.9

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      |....+++||+..      .|++|.+|+.+|+..||+|+.+.|+... ..+++.++..                    . 
T Consensus        18 ~~~~~~~~Ly~~~------~sp~~~~v~~~L~~~gi~~e~~~v~~~~-~~~~~~~~nP--------------------~-   69 (239)
T 3q18_A           18 PVPEGLIRIYSMR------FCPYSHRTRLVLKAKDIRHEVVNINLRN-KPEWYYTKHP--------------------F-   69 (239)
T ss_dssp             CCCTTCEEEEECT------TCHHHHHHHHHHHHTTCCEEEEEBCSSS-CCGGGGGTST--------------------T-
T ss_pred             CCCCCeEEEEeCC------CChHHHHHHHHHHHcCCCcEEEecCccc-CCHHHHhcCC--------------------C-
Confidence            3456689999998      9999999999999999999999987542 1112222211                    1 


Q ss_pred             CCCCCCEEEE-CCeEEechHHHHHHHH
Q 041824          194 LPPVLPRVFV-KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       194 tv~~LPqIFI-~G~~IGG~del~~L~E  219 (289)
                        ..+|.+.+ ||..|.....+.+..+
T Consensus        70 --g~vP~L~~~~g~~l~eS~aI~~yL~   94 (239)
T 3q18_A           70 --GHIPVLETSQSQLIYESVIACEYLD   94 (239)
T ss_dssp             --CCSCEEECTTCCEECSHHHHHHHHH
T ss_pred             --CCCCEEEeCCCceeecHHHHHHHHH
Confidence              23499999 9999988887776543

>1zl9_A GST class-sigma, glutathione S-transferase 5; glutathione transferase, C.elegans; HET: GSH; 2.01A {Caenorhabditis elegans}

Probab=96.95  E-value=0.0035  Score=52.28  Aligned_cols=74  Identities=14%  Similarity=0.163  Sum_probs=56.4

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      ..+++|+..      .+++|.+++.+|+..||+|+.+.|+.+.  ..+++++.|..                  .   ..
T Consensus         2 ~~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~--~~~~~~~~~~P------------------~---g~   52 (207)
T 1zl9_A            2 VSYKLTYFN------GRGAGEVSRQIFAYAGQQYEDNRVTQEQ--WPALKETCAAP------------------F---GQ   52 (207)
T ss_dssp             CCEEEEEES------SSGGGHHHHHHHHHHTCCCEEEEECTTT--HHHHHHTTCST------------------T---SC
T ss_pred             CceEEEEcC------CCchHHHHHHHHHHcCCCceEEEecHHH--HHHHhhccCCC------------------C---CC
Confidence            468999998      8899999999999999999999998532  35555542211                  1   23


Q ss_pred             CCEEEECCeEEechHHHHHHHHh
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E~  220 (289)
                      +|.+..||..|.....+.+..++
T Consensus        53 vP~L~~~g~~l~eS~aI~~yL~~   75 (207)
T 1zl9_A           53 LPFLEVDGKKLAQSHAIARFLAR   75 (207)
T ss_dssp             SCEEEETTEEEECHHHHHHHHHH
T ss_pred             CCEEEECCEEEeeHHHHHHHHHH
Confidence            49999999999998888776543

>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}

Probab=96.93  E-value=0.0029  Score=53.35  Aligned_cols=71  Identities=15%  Similarity=0.263  Sum_probs=55.6

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      .++||+..      .|++|.+|+.+|+..||+|+.+.|+... ..+++.++...                    ..+   
T Consensus         6 ~~~Ly~~~------~sp~~~~v~~~L~~~gi~~e~~~v~~~~-~~~~~~~~~P~--------------------g~v---   55 (216)
T 3lyk_A            6 VMTLFSNK------DDIYCHQVKIVLAEKGVLYENAEVDLQA-LPEDLMELNPY--------------------GTV---   55 (216)
T ss_dssp             CEEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTTS-CCHHHHHHCTT--------------------CCS---
T ss_pred             eEEEEeCC------CChhHHHHHHHHHHcCCCcEEEeCCccc-CcHHHHhhCCC--------------------CCc---
Confidence            48999999      9999999999999999999999987642 23455554322                    134   


Q ss_pred             CEEEECCeEEechHHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E  219 (289)
                      |.+..||..|.....+.+..+
T Consensus        56 P~L~~~g~~l~eS~aI~~yL~   76 (216)
T 3lyk_A           56 PTLVDRDLVLFNSRIIMEYLD   76 (216)
T ss_dssp             CEEEETTEEEESHHHHHHHHH
T ss_pred             CeEEECCeEecCHHHHHHHHH
Confidence            999999999998888877554

>3n5o_A Glutathione transferase; seattle structural genomics center for infectious disease, S GST, pathogenic fungus, coccidioidomycosis; HET: GSH; 1.85A {Coccidioides immitis} PDB: 3lg6_A*

Probab=96.93  E-value=0.0032  Score=53.50  Aligned_cols=72  Identities=11%  Similarity=0.124  Sum_probs=55.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC--hhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD--RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d--~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      +++||+..      .|++|.+|+.+|+.+||+|+.+.|+..  ....+++.++...                    ..+ 
T Consensus         9 ~~~Ly~~~------~s~~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~nP~--------------------g~v-   61 (235)
T 3n5o_A            9 NFELYGYF------RSSCSGRLRIAFHLKSIPYTRHPVNLLKGEQHSDTYKSLNPT--------------------NTV-   61 (235)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHCTT--------------------CCS-
T ss_pred             CeEEEecC------CCcHHHHHHHHHHHcCCccEEEecccccccccCHHHHhcCCC--------------------CCC-
Confidence            59999998      899999999999999999999988753  2233455555322                    134 


Q ss_pred             CCCEEEECC-----------eEEechHHHHHHHH
Q 041824          197 VLPRVFVKG-----------RYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~G-----------~~IGG~del~~L~E  219 (289)
                        |.|.++|           ..|.....|.++.+
T Consensus        62 --P~L~~~~g~~~~~~~~~~~~l~eS~aI~~yL~   93 (235)
T 3n5o_A           62 --PLLVVSNINNTVSPSSASFSIGQSLAALEYLE   93 (235)
T ss_dssp             --CEEEEESSCCSSSTTCSEEEECSHHHHHHHHH
T ss_pred             --CEEEeCCCccccccccCceeehhHHHHHHHHH
Confidence              9999988           88888877776544

>2imi_A Epsilon-class glutathione S-transferase; HET: GSH; 1.40A {Anopheles gambiae} PDB: 2il3_A* 2imk_A*

Probab=96.91  E-value=0.0026  Score=53.72  Aligned_cols=73  Identities=15%  Similarity=0.334  Sum_probs=54.5

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      .+++||+..      .|++|.+++.+|+..||+|+.+.|+...  ...+++.++...                       
T Consensus         2 ~~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~-----------------------   52 (221)
T 2imi_A            2 SNLVLYTLH------LSPPCRAVELTAKALGLELEQKTINLLTGDHLKPEFVKLNPQ-----------------------   52 (221)
T ss_dssp             CCEEEEECT------TCHHHHHHHHHHHHHTCCEEEEECCGGGTGGGSHHHHTTCTT-----------------------
T ss_pred             CceEEeeCC------CCccHHHHHHHHHHcCCCceEEEccccccccCCHHHHhhCcC-----------------------
Confidence            468999998      9999999999999999999999987532  122344332111                       


Q ss_pred             CCCCEEEECCeEEechHHHHHHHH
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                      ..+|.+..||..|.....+.+..+
T Consensus        53 g~vP~L~~~g~~l~eS~aI~~yL~   76 (221)
T 2imi_A           53 HTIPVLDDNGTIITESHAIMIYLV   76 (221)
T ss_dssp             CCSCEEEETTEEEESHHHHHHHHH
T ss_pred             CCCCEEEECCEEEeeHHHHHHHHH
Confidence            234999889999998888877544

>1okt_A Glutathione S-transferase; GST; 1.9A {Plasmodium falciparum} SCOP: a.45.1.1 c.47.1.5 PDB: 1pa3_A 1q4j_A* 3fr9_A* 3frc_A* 2aaw_A* 3fr6_A 3fr3_A*

Probab=96.91  E-value=0.0027  Score=53.18  Aligned_cols=77  Identities=8%  Similarity=0.225  Sum_probs=55.2

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHH--HcccccccCCCCCcchhhccCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELREL--MMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~l--lg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      +.+++||...      .|++|.+|+-+|+..||+|+.+.|+...+...++++.  .+..          +       .  
T Consensus         2 m~~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~----------P-------~--   56 (211)
T 1okt_A            2 GDNIVLYYFD------ARGKAELIRLIFAYLGIEYTDKRFGVNGDAFVEFKNFKKEKDT----------P-------F--   56 (211)
T ss_dssp             CCCEEEEEES------SSTTTHHHHHHHHHHTCCCEEEEETSSSCHHHHHHHHHHHSCC----------S-------S--
T ss_pred             CCccEEEEEC------CCchhHHHHHHHHHcCCCceeeeccCCHHHHHHHhhccccccC----------C-------C--
Confidence            3468999999      8999999999999999999999886432223444431  0011          0       1  


Q ss_pred             CCCCCEEEECCeEEechHHHHHHHH
Q 041824          195 PPVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       195 v~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                       ..+|.+..||..|.....+.+..+
T Consensus        57 -g~vP~L~~~g~~l~eS~aI~~yL~   80 (211)
T 1okt_A           57 -EQVPILQIGDLILAQSQAIVRYLS   80 (211)
T ss_dssp             -SCSCEEEETTEEEECHHHHHHHHH
T ss_pred             -CCCCEEEECCEEeehHHHHHHHHH
Confidence             234999999999998888777554

>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A 3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A

Probab=96.89  E-value=0.0038  Score=54.24  Aligned_cols=80  Identities=13%  Similarity=0.079  Sum_probs=56.9

Q ss_pred             CCCcEEEEEecCC-CC-CCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          116 GENKVVIYTTTLR-GI-RKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       116 ~~~kVVVYttSLr-gv-R~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      ++..+.+|.+.-+ |. ...|++|.+|+.+|+.+||+|+.+.|+.. ...+++.++...                    .
T Consensus         4 ~~~~~~Ly~~~~~~g~~~~~sp~~~rv~~~L~~~gi~ye~~~v~~~-~~~~~~~~~nP~--------------------g   62 (241)
T 1k0m_A            4 EQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTK-RRTETVQKLCPG--------------------G   62 (241)
T ss_dssp             --CCEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEECTT-SCCHHHHHHCTT--------------------C
T ss_pred             CCCceEEEeecCCCCCCCCCCHHHHHHHHHHHHcCCccEEEEcCCc-ccHHHHHHhCCC--------------------C
Confidence            3557999988622 11 24899999999999999999999888753 223445544321                    1


Q ss_pred             CCCCCCEEEECCeEEechHHHHHHHH
Q 041824          194 LPPVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       194 tv~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                      .+   |.+..||..|.....+.+..+
T Consensus        63 ~V---PvL~~~g~~l~eS~aI~~yL~   85 (241)
T 1k0m_A           63 EL---PFLLYGTEVHTDTNKIEEFLE   85 (241)
T ss_dssp             CS---SEEEETTEEEECHHHHHHHHH
T ss_pred             CC---CEEEECCEEecCHHHHHHHHH
Confidence            34   999999999988888877654

>1pn9_A GST class-delta, glutathione S-transferase 1-6; protein inhibitor complex; HET: GTX; 2.00A {Anopheles gambiae} SCOP: a.45.1.1 c.47.1.5

Probab=96.87  E-value=0.0045  Score=51.80  Aligned_cols=71  Identities=14%  Similarity=0.187  Sum_probs=53.8

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.||+..      .|++|.+|+.+|+..||+|+.+.|+...  ....++.++...                    .++  
T Consensus         1 ~~Ly~~~------~sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~--------------------g~v--   52 (209)
T 1pn9_A            1 MDFYYLP------GSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQ--------------------HCI--   52 (209)
T ss_dssp             CEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHCTT--------------------CCS--
T ss_pred             CeEEeCC------CCccHHHHHHHHHHcCCCcEEEEecccCCCcCCHHHHhhCCC--------------------CCC--
Confidence            4689888      8999999999999999999999887522  223455554321                    134  


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                       |.+..||..|.....+.+..+
T Consensus        53 -P~L~~~g~~l~eS~aI~~yL~   73 (209)
T 1pn9_A           53 -PTLVDNGFALWESRAIQIYLA   73 (209)
T ss_dssp             -SEEEETTEEEESHHHHHHHHH
T ss_pred             -CEEEECCEEEEeHHHHHHHHH
Confidence             999999999999888877554

>3ay8_A Glutathione S-transferase; GST fold, GST binding, cytosolic; 2.10A {Bombyx mori}

Probab=96.87  E-value=0.0033  Score=52.85  Aligned_cols=73  Identities=10%  Similarity=0.108  Sum_probs=55.8

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      .+++||+..      .|++|.+|+.+|+..||+|+.+.|+...  ...+++.++...                    ..+
T Consensus         2 ~~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~--------------------g~v   55 (216)
T 3ay8_A            2 SSLKLYHFP------VSGPSRGALLAARAIGIPIQIEIVNLFKKEQLQESFLKLNPQ--------------------HCV   55 (216)
T ss_dssp             CCCEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTTCGGGCCHHHHHHSSS--------------------CCS
T ss_pred             CceEEecCC------CCccHHHHHHHHHHcCCCceEEEeccccccccCHHHHhhCCC--------------------CCC
Confidence            357899998      8999999999999999999999987532  123455554321                    134


Q ss_pred             CCCCEEEECCeEEechHHHHHHHH
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                         |.+..||..|.....+.+..+
T Consensus        56 ---P~L~~~g~~l~eS~aI~~yL~   76 (216)
T 3ay8_A           56 ---PTLDDNNFVLWESRAIACYLA   76 (216)
T ss_dssp             ---SEEEETTEEEECHHHHHHHHH
T ss_pred             ---CeEEECCEEEEcHHHHHHHHH
Confidence               999999999998888777554

>1gwc_A Glutathione S-transferase TSI-1; herbicide detoxification, plant, TAU class; HET: GTX; 2.25A {Aegilops tauschii} SCOP: a.45.1.1 c.47.1.5

Probab=96.87  E-value=0.0039  Score=52.81  Aligned_cols=73  Identities=11%  Similarity=0.083  Sum_probs=54.6

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .++.||+..      .|++|.+++.+|+..||+|+.+.|+.. ...+++.++....                      ..
T Consensus         5 ~~~~Ly~~~------~sp~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~nP~~----------------------g~   55 (230)
T 1gwc_A            5 DDLKLLGAW------PSPFVTRVKLALALKGLSYEDVEEDLY-KKSELLLKSNPVH----------------------KK   55 (230)
T ss_dssp             CCEEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTT-SCCHHHHHHSTTT----------------------CC
T ss_pred             CcEEEEeCC------CChHHHHHHHHHHHcCCCCeEEecccc-cCCHHHHhhCCCC----------------------Cc
Confidence            579999999      999999999999999999999988753 1123343332110                      13


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                      +|.+..||..|.....+.+..+
T Consensus        56 vP~L~~~g~~l~eS~aI~~yL~   77 (230)
T 1gwc_A           56 IPVLIHNGAPVCESMIILQYID   77 (230)
T ss_dssp             SCEEEETTEEEESHHHHHHHHH
T ss_pred             cCEEEECCEEeecHHHHHHHHH
Confidence            4999999999988888777554

>1yq1_A Glutathione S-transferase; nematoda, structural genomics, PSI, protein structure initiative; 3.00A {Caenorhabditis elegans}

Probab=96.87  E-value=0.0019  Score=53.66  Aligned_cols=72  Identities=13%  Similarity=0.076  Sum_probs=54.0

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .++.+|+..      .|++|.+|+.+|+..||+|+.+.|+.. ....+++++...                       ..
T Consensus         2 ~~~~Ly~~~------~s~~~~~vr~~L~~~gi~~e~~~v~~~-~~~~~~~~~~P~-----------------------g~   51 (208)
T 1yq1_A            2 PSYKLTYFF------FRGLGEPIRLLFHLAGVQFEEVRMNPD-QTWLDIKDSTPM-----------------------KQ   51 (208)
T ss_dssp             CCEEEEEES------SSTTTHHHHHHHHHHTCCCEEEEECTT-TCCHHHHHTSTT-----------------------SC
T ss_pred             CceEEEEeC------CCCchHHHHHHHHHcCCCeEEEEeccc-chhhhhhccCCC-----------------------CC
Confidence            468999999      899999999999999999999888741 112344433211                       13


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                      +|.+..||..|.....+.+..+
T Consensus        52 vP~L~~~g~~l~eS~aI~~yL~   73 (208)
T 1yq1_A           52 LPVLNIDGFELPQSGAILRYLA   73 (208)
T ss_dssp             SCEEEESSCEECCHHHHHHHHH
T ss_pred             CCEEEECCEEEeeHHHHHHHHH
Confidence            4999999999998888777554

>1axd_A Glutathione S-transferase I; transferase, herbicide detoxification, transferase-transfera inhibitor complex; HET: GGL CYW; 2.50A {Zea mays} SCOP: a.45.1.1 c.47.1.5 PDB: 1bye_A*

Probab=96.86  E-value=0.0019  Score=53.50  Aligned_cols=72  Identities=8%  Similarity=0.008  Sum_probs=54.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      .+.+|+..      .|++|.+++.+|+..||+|+.+.|+...  ...+++.++...                       .
T Consensus         2 ~~~Ly~~~------~sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~-----------------------g   52 (209)
T 1axd_A            2 PMKLYGAV------MSWNLTRCATALEEAGSDYEIVPINFATAEHKSPEHLVRNPF-----------------------G   52 (209)
T ss_dssp             CEEEESCT------TCTTHHHHHHHHHHHTCCEEEECCCTTTTGGGSHHHHTTCTT-----------------------C
T ss_pred             ceEEEeCC------CCchHHHHHHHHHhcCCCCEEEeccccccCcCChHHHHhCcC-----------------------C
Confidence            47899988      8999999999999999999999887642  122344332111                       2


Q ss_pred             CCCEEEECCeEEechHHHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E  219 (289)
                      .+|.+..||..|.....+.+..+
T Consensus        53 ~vP~L~~~g~~l~eS~aI~~yL~   75 (209)
T 1axd_A           53 QVPALQDGDLYLFESRAICKYAA   75 (209)
T ss_dssp             CSCEEEETTEEEESHHHHHHHHH
T ss_pred             CCCeEEECCEEEecHHHHHHHHH
Confidence            34999999999999888877554

>2vo4_A 2,4-D inducible glutathione S-transferase; herbicide, TAU class GST, S-(P-nitrobenzyl- glutathione); HET: GTB 4NM; 1.75A {Glycine max} PDB: 3fhs_A*

Probab=96.86  E-value=0.005  Score=51.85  Aligned_cols=72  Identities=10%  Similarity=0.111  Sum_probs=54.2

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      ++.+|+..      .|++|.+++.+|+..||+|+.+.++.. ...+++.++....                      ..+
T Consensus         4 ~~~Ly~~~------~sp~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~nP~~----------------------g~v   54 (219)
T 2vo4_A            4 EVVLLDFW------PSPFGMRVRIALAEKGIKYEYKEEDLR-NKSPLLLQMNPVH----------------------KKI   54 (219)
T ss_dssp             CEEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCTT-SCCHHHHHHCTTT----------------------CCS
T ss_pred             ceEEEecc------CCchHHHHHHHHHHcCCCceEEecCcc-cCCHHHHHhCCCC----------------------CcC
Confidence            68999998      899999999999999999999988753 1123444332110                      134


Q ss_pred             CEEEECCeEEechHHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E  219 (289)
                      |.+..||..|.....+.+..+
T Consensus        55 P~L~~~g~~l~eS~aI~~yL~   75 (219)
T 2vo4_A           55 PVLIHNGKPICESLIAVQYIE   75 (219)
T ss_dssp             CEEEETTEEEESHHHHHHHHH
T ss_pred             CEEEECCEeeehHHHHHHHHH
Confidence            999999999998888777654

>2on5_A Nagst-2, Na glutathione S-transferase 2; hookworm; HET: GSH; 1.90A {Necator americanus}

Probab=96.86  E-value=0.0022  Score=53.19  Aligned_cols=71  Identities=7%  Similarity=0.056  Sum_probs=53.8

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .++.+|+..      .|++|.+++.+|+..||+|+.+.|+.+.  ..++++...                    .   ..
T Consensus         2 ~~~~Ly~~~------~s~~~~~vr~~L~~~gi~ye~~~v~~~~--~~~~~~~~P--------------------~---g~   50 (206)
T 2on5_A            2 VHYKLTYFA------GRGLAEPIRQIFALAGQKYEDVRYTFQE--WPKHKDEMP--------------------F---GQ   50 (206)
T ss_dssp             CCEEEEEES------SSGGGHHHHHHHHHHTCCCEEEEECTTT--GGGGGGGST--------------------T---SC
T ss_pred             CceEEEecC------CCcchHHHHHHHHHcCCCceEEEecHHH--HHHhccCCC--------------------C---CC
Confidence            468999998      8999999999999999999999987532  123332211                    1   23


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                      +|.+..||..|.....+.+..+
T Consensus        51 vP~L~~~g~~l~eS~aI~~yL~   72 (206)
T 2on5_A           51 IPVLEEDGKQLAQSFAIARYLS   72 (206)
T ss_dssp             SCEEEETTEEEESHHHHHHHHH
T ss_pred             CCEEEECCEEEecHHHHHHHHH
Confidence            4999999999999888877654

>1v2a_A Glutathione transferase GST1-6; glutathione S-transferase, detoxification, xenobiotics; HET: GTS; 2.15A {Anopheles dirus} SCOP: a.45.1.1 c.47.1.5

Probab=96.83  E-value=0.0064  Score=50.74  Aligned_cols=71  Identities=13%  Similarity=0.218  Sum_probs=54.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh-hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR-GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~-~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +.+|+..      .|++|.+|+.+|+..||+|+.+.|+... +..+++.++...                    ..+   
T Consensus         1 ~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~nP~--------------------g~v---   51 (210)
T 1v2a_A            1 MDYYYSL------ISPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKLNPQ--------------------HTI---   51 (210)
T ss_dssp             CEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCTT--------------------CCS---
T ss_pred             CeEEeCC------CCccHHHHHHHHHHcCCCcEEEECCcccchhhHHHHHhCCC--------------------CCc---
Confidence            4688888      8999999999999999999999887632 223555554221                    134   


Q ss_pred             CEEEECCeEEechHHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E  219 (289)
                      |.+..||..|.....+.+..+
T Consensus        52 P~L~~~g~~l~eS~aI~~yL~   72 (210)
T 1v2a_A           52 PTLVDNGHVVWESYAIVLYLV   72 (210)
T ss_dssp             CEEEETTEEEESHHHHHHHHH
T ss_pred             CeEEECCEEEEcHHHHHHHHH
Confidence            999999999999888877554

>2ws2_A NU-class GST, glutathione S-transferase; parasite, nematode; 2.01A {Haemonchus contortus}

Probab=96.83  E-value=0.0029  Score=52.53  Aligned_cols=72  Identities=13%  Similarity=0.103  Sum_probs=54.1

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .+++||+..      .|++|.+++.+|+.+||+|+.+.|+.+.  ..+++++..                    .   ..
T Consensus         2 ~~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~--~~~~~~~~P--------------------~---g~   50 (204)
T 2ws2_A            2 VHYKLTYFN------GRGAAEIIRQVFVLAGQDYEDVRLTHEE--WPKHKASMP--------------------F---GQ   50 (204)
T ss_dssp             CCEEEEEES------SSGGGHHHHHHHHHTTCCCEEEEECTTT--GGGTGGGST--------------------T---SC
T ss_pred             CccEEEEeC------CCchHHHHHHHHHHcCCCceEEEecHhh--HHHhhhcCC--------------------C---CC
Confidence            468999999      8999999999999999999999887531  123322211                    1   13


Q ss_pred             CCEEEECCeEEechHHHHHHHHh
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E~  220 (289)
                      +|.+..||..|.....+.+..++
T Consensus        51 vP~L~~~g~~l~eS~aI~~yL~~   73 (204)
T 2ws2_A           51 LPVLEVDGKQLPQSVAIVRYLAR   73 (204)
T ss_dssp             SCEEEETTEEEESHHHHHHHHHH
T ss_pred             CCEEEECCEEeecHHHHHHHHHH
Confidence            49999999999998888776543

>2on7_A Nagst-1, Na glutathione S-transferase 1; hookworm; 2.40A {Necator americanus}

Probab=96.82  E-value=0.0037  Score=51.82  Aligned_cols=71  Identities=8%  Similarity=0.046  Sum_probs=53.5

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .++++|...      .|++|.+|+.+|+..||+|+.+.|+.  +...+++++..                    .   ..
T Consensus         2 ~~~~Ly~~~------~s~~~~~vr~~L~~~gi~~e~~~v~~--~~~~~~~~~~P--------------------~---g~   50 (206)
T 2on7_A            2 VHYKLTYFA------IRGAGECARQIFALADQEFEDVRLDK--EQFAKVKPDLP--------------------F---GQ   50 (206)
T ss_dssp             CCEEEEEES------SSTTTHHHHHHHHHHTCCCEEEEECH--HHHHHHGGGSS--------------------S---SC
T ss_pred             CceEEEEcC------CCcchHHHHHHHHHcCCCeeEEEecH--HHHHHhCcCCC--------------------C---CC
Confidence            468999998      88999999999999999999999873  11233332211                    1   13


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                      +|.+..||..|.....+.+..+
T Consensus        51 vP~L~~~g~~l~eS~aI~~yL~   72 (206)
T 2on7_A           51 VPVLEVDGKQLAQSLAICRYLA   72 (206)
T ss_dssp             SCEEEETTEEEECHHHHHHHHH
T ss_pred             CCEEEECCEEEeeHHHHHHHHH
Confidence            4999999999999888877654

>1gnw_A Glutathione S-transferase; herbicide detoxification; HET: GTX; 2.20A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5 PDB: 1bx9_A*

Probab=96.81  E-value=0.002  Score=53.56  Aligned_cols=72  Identities=8%  Similarity=0.028  Sum_probs=52.9

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh--HHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG--FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~--~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      .+.||+..      .|++|.+++.+|+.+||+|+.+.|+....  ...++.++..                    .   .
T Consensus         2 ~~~Ly~~~------~sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P--------------------~---g   52 (211)
T 1gnw_A            2 GIKVFGHP------ASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNP--------------------F---G   52 (211)
T ss_dssp             CEEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSTTGGGTCT--------------------T---C
T ss_pred             eeEEEeCC------CCcchHHHHHHHHhcCCCcEEEEeccccccccCHHHHHhCC--------------------C---C
Confidence            47899998      99999999999999999999998875321  1122222111                    1   2


Q ss_pred             CCCEEEECCeEEechHHHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E  219 (289)
                      .+|.+..||..|.....+.+..+
T Consensus        53 ~vP~L~~~g~~l~eS~aI~~yL~   75 (211)
T 1gnw_A           53 QVPAFEDGDLKLFESRAITQYIA   75 (211)
T ss_dssp             CSCEEEETTEEEECHHHHHHHHH
T ss_pred             CCCEEEECCEEEeCHHHHHHHHH
Confidence            34999999999998888877554

>1tw9_A Glutathione S-transferase 2; 1.71A {Heligmosomoides polygyrus} SCOP: a.45.1.1 c.47.1.5

Probab=96.79  E-value=0.0036  Score=51.86  Aligned_cols=71  Identities=11%  Similarity=0.080  Sum_probs=53.1

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .++++|+..      .|++|.+++.+|+..||+|+.+.|+.+  ...+++++..                    .   ..
T Consensus         2 ~~~~Ly~~~------~s~~~~~v~~~L~~~gi~ye~~~v~~~--~~~~~~~~~P--------------------~---g~   50 (206)
T 1tw9_A            2 VHYKLTYFN------GRGAGECARQVFALADQKYEDVRLTQE--TFVPLKATFP--------------------F---GQ   50 (206)
T ss_dssp             CCEEEEEES------SSGGGHHHHHHHHHTTCCCEEEEECHH--HHGGGGGGST--------------------T---SC
T ss_pred             CceEEEEcC------CCccHHHHHHHHHHcCCCceEEEeCHH--HHHHHcccCC--------------------C---CC
Confidence            468999998      889999999999999999999998731  1122222111                    1   23


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                      +|.+..||..|.....+.+..+
T Consensus        51 vP~L~~~g~~l~eS~aI~~yL~   72 (206)
T 1tw9_A           51 VPVLEVDGQQLAQSQAICRYLA   72 (206)
T ss_dssp             SCEEEETTEEEECHHHHHHHHH
T ss_pred             CCEEEECCEEEecHHHHHHHHH
Confidence            4999999999999888877654

>1aw9_A Glutathione S-transferase III; herbicide detoxification; 2.20A {Zea mays} SCOP: a.45.1.1 c.47.1.5

Probab=96.79  E-value=0.0012  Score=55.22  Aligned_cols=72  Identities=11%  Similarity=0.140  Sum_probs=53.0

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh--HHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG--FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~--~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      ++.||+..      .|++|.+++.+|+..||+|+.+.|+....  ...++.++..                    .   .
T Consensus         2 ~~~Ly~~~------~sp~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~P--------------------~---g   52 (216)
T 1aw9_A            2 PLKLYGMP------LSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNP--------------------F---G   52 (216)
T ss_dssp             CEEEESCT------TCHHHHHHHHHHHHTTCCEEEECCCSSTTSSCCCSGGGTCT--------------------T---C
T ss_pred             ceEEEecC------CCccHHHHHHHHHHcCCccEEEecCccccccCCHHHHHhCC--------------------C---C
Confidence            47899988      99999999999999999999998875321  1112221111                    1   2


Q ss_pred             CCCEEEECCeEEechHHHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E  219 (289)
                      .+|.+..||..|.....+.+..+
T Consensus        53 ~vP~L~~~g~~l~eS~aI~~yL~   75 (216)
T 1aw9_A           53 QIPALVDGDEVLFESRAINRYIA   75 (216)
T ss_dssp             CSCEEEETTEEEESHHHHHHHHH
T ss_pred             CcCEEEECCEEeeCHHHHHHHHH
Confidence            34999999999999888887654

>2cvd_A Glutathione-requiring prostaglandin D synthase; glutathione-S-transferase, isomerase; HET: GSH HQL; 1.45A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1iyi_A* 1v40_A* 1iyh_A* 3vi5_A* 3vi7_A* 2vcq_A* 2vcw_A* 2vcx_A* 2vcz_A* 2vd0_A* 2vd1_A* 3kxo_A* 3ee2_A* 1pd2_1*

Probab=96.75  E-value=0.0053  Score=50.79  Aligned_cols=71  Identities=7%  Similarity=0.079  Sum_probs=54.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      ++.+|+..      .+++|.+|+.+|+..||+|+.+.|+.+  ...++.++...                       ..+
T Consensus         2 ~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~--~~~~~~~~~P~-----------------------g~v   50 (198)
T 2cvd_A            2 NYKLTYFN------MRGRAEIIRYIFAYLDIQYEDHRIEQA--DWPEIKSTLPF-----------------------GKI   50 (198)
T ss_dssp             CEEEEEES------SSGGGHHHHHHHHHTTCCCEEEEECGG--GHHHHHTTSTT-----------------------SCS
T ss_pred             CcEEEEcC------CCchHHHHHHHHHHcCCCceEEEeCHH--HHHHhccCCCC-----------------------CCC
Confidence            47899998      899999999999999999999988752  23344332111                       134


Q ss_pred             CEEEECCeEEechHHHHHHHHh
Q 041824          199 PRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E~  220 (289)
                      |.+..||..|.....+.+..++
T Consensus        51 P~L~~~g~~l~eS~aI~~yL~~   72 (198)
T 2cvd_A           51 PILEVDGLTLHQSLAIARYLTK   72 (198)
T ss_dssp             CEEEETTEEEECHHHHHHHHHT
T ss_pred             CEEEECCEEEecHHHHHHHHHH
Confidence            9999999999998888876654

>3lxz_A Glutathione S-transferase family protein; structural genomics, PP0183, PSI-2, protein structure initiative; 1.76A {Pseudomonas putida} PDB: 3pr8_A*

Probab=96.72  E-value=0.0042  Score=52.55  Aligned_cols=69  Identities=13%  Similarity=0.147  Sum_probs=53.1

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      +.||+..      .|++|.+|+.+|+..||+|+.+.|..+  ...++.++...                       ..+|
T Consensus         3 ~~Ly~~~------~sp~~~~v~~~L~~~gi~ye~~~v~~~--~~~~~~~~~P~-----------------------g~vP   51 (229)
T 3lxz_A            3 LKLYGFS------VSNYYNMVKLALLEKGLTFEEVTFYGG--QAPQALEVSPR-----------------------GKVP   51 (229)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHTTCCEEEEECCCC--SCHHHHTTSTT-----------------------SCSC
T ss_pred             EEEEeCC------CCchHHHHHHHHHHcCCCCEEEecCCC--CCHHHHhhCCC-----------------------CCcC
Confidence            7899998      999999999999999999999999543  23344433211                       1349


Q ss_pred             EEEECCeEEechHHHHHHHH
Q 041824          200 RVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       200 qIFI~G~~IGG~del~~L~E  219 (289)
                      .|.++|..|.....+.+..+
T Consensus        52 ~L~~~~~~l~eS~aI~~yL~   71 (229)
T 3lxz_A           52 VLETEHGFLSETSVILDYIE   71 (229)
T ss_dssp             EEEETTEEEESHHHHHHHHH
T ss_pred             eEEeCCceeecHHHHHHHHH
Confidence            99999988988888777554

>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics; HET: GSH; 1.75A {Pseudomonas fluorescens}

Probab=96.72  E-value=0.0054  Score=51.08  Aligned_cols=74  Identities=12%  Similarity=0.168  Sum_probs=55.1

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      ..+.||...      .|++|.+|+.+|+..||+|+.+.|+...  ...+++.++...                       
T Consensus         2 ~~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~-----------------------   52 (210)
T 3m3m_A            2 SLYKVYGDY------RSGNCYKIKLMLNLLGLPYEWQAVDILGGDTQTEAFLAKNPN-----------------------   52 (210)
T ss_dssp             CCEEEEECT------TSHHHHHHHHHHHHTTCCEEEEECCTTTTTTSSHHHHTTCTT-----------------------
T ss_pred             CeEEEeCCC------CCCcHHHHHHHHHHcCCCCEEEEecCCCccccCHHHHhhCCC-----------------------
Confidence            358899998      8999999999999999999999987521  222344432211                       


Q ss_pred             CCCCEEEE-CCeEEechHHHHHHHHh
Q 041824          196 PVLPRVFV-KGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       196 ~~LPqIFI-~G~~IGG~del~~L~E~  220 (289)
                      ..+|.+.+ ||..|.....+.+..++
T Consensus        53 g~vP~L~~d~g~~l~eS~aI~~yL~~   78 (210)
T 3m3m_A           53 GKIPVLELEDGTCLWESNAILNFLAD   78 (210)
T ss_dssp             CCSCEEEETTSCEEECHHHHHHHHHT
T ss_pred             CCCCEEEecCCEEEecHHHHHHHHhc
Confidence            23499996 88889888888877665

>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A

Probab=96.72  E-value=0.021  Score=43.75  Aligned_cols=37  Identities=19%  Similarity=0.233  Sum_probs=27.8

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCCh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDR  160 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~  160 (289)
                      .-||.|+++      +|++|+++...|+.    +  +|.|..+|++.+.
T Consensus        33 ~vlv~f~a~------~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~   75 (119)
T 1w4v_A           33 PVVVDFHAQ------WCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHT   75 (119)
T ss_dssp             CEEEEEECT------TCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTH
T ss_pred             cEEEEEECC------CCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCH
Confidence            345666666      99999998877764    2  5888899988765

>2c3n_A Glutathione S-transferase theta 1; glutathione transferase, polymorphism; 1.5A {Homo sapiens} PDB: 2c3q_A* 2c3t_A

Probab=96.72  E-value=0.0065  Score=52.70  Aligned_cols=73  Identities=10%  Similarity=0.095  Sum_probs=55.4

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      ..|++|...      .|++|++|+.+|+..||+|+.+.|+...  ...+++.++...                    ..+
T Consensus         8 ~~~~ly~~~------~sp~~rkv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~--------------------gkV   61 (247)
T 2c3n_A            8 MGLELYLDL------LSQPCRAVYIFAKKNDIPFELRIVDLIKGQHLSDAFAQVNPL--------------------KKV   61 (247)
T ss_dssp             -CEEEEECT------TSHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHCTT--------------------CCS
T ss_pred             cceEEeecC------CChhHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCC--------------------CcC
Confidence            369999999      9999999999999999999999887532  123445544221                    134


Q ss_pred             CCCCEEEECCeEEechHHHHHHHH
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                         |.+..||..|.....+.+..+
T Consensus        62 ---PvL~d~g~~l~ES~aI~~YL~   82 (247)
T 2c3n_A           62 ---PALKDGDFTLTESVAILLYLT   82 (247)
T ss_dssp             ---CEEEETTEEEECHHHHHHHHH
T ss_pred             ---cEEEECCEEEEcHHHHHHHHH
Confidence               999999999988888777554

>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}

Probab=96.71  E-value=0.0066  Score=49.59  Aligned_cols=38  Identities=21%  Similarity=0.360  Sum_probs=27.5

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHh----C-CCcEEEEEcC
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVIEN----F-GVAVSERDVS  157 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~-gV~y~ErDVs  157 (289)
                      +.++-.|++|+..      +|++|.+....|+.    + .|.+..+++.
T Consensus        20 ~~a~v~i~~f~d~------~Cp~C~~~~~~l~~l~~~~~~v~~~~~~~p   62 (175)
T 3gyk_A           20 PEGDVTVVEFFDY------NCPYCRRAMAEVQGLVDADPNVRLVYREWP   62 (175)
T ss_dssp             TTCSEEEEEEECT------TCHHHHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred             CCCCEEEEEEECC------CCccHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            4455568889999      99999987666543    4 3577788764

>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1

Probab=96.71  E-value=0.016  Score=43.74  Aligned_cols=36  Identities=17%  Similarity=0.155  Sum_probs=28.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh-----CCCcEEEEEcCCCh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN-----FGVAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~-----~gV~y~ErDVs~d~  160 (289)
                      -||.|+++      +|++|+++...|+.     .+|.|..+|++.++
T Consensus        29 vlv~f~a~------~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~   69 (112)
T 1syr_A           29 VIVDFFAE------WCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVS   69 (112)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTH
T ss_pred             EEEEEECC------CCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCH
Confidence            35556666      99999999988876     36889999998765

>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A

Probab=96.71  E-value=0.014  Score=42.11  Aligned_cols=37  Identities=16%  Similarity=0.259  Sum_probs=28.2

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C-CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F-GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~-gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+.    + ++.+..+|++.+++
T Consensus        19 ~~v~f~~~------~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~~~   60 (104)
T 2e0q_A           19 AVVDFWAE------WCAPCLILAPIIEELAEDYPQVGFGKLNSDENPD   60 (104)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHH
T ss_pred             EEEEEECC------CChhHHHHhHHHHHHHHHcCCceEEEEECCCCHH
Confidence            35566666      99999999887765    2 58899999987653

>3bby_A Uncharacterized GST-like protein YFCF; NP_416804.1, glutathione S-transferase, N-terminal domain, S genomics; 1.85A {Escherichia coli}

Probab=96.69  E-value=0.0071  Score=50.66  Aligned_cols=75  Identities=7%  Similarity=0.101  Sum_probs=49.4

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      .+++||+..-    ..|++|.+|+.+|+..||+|+.+.|+...  ...+++.++...                    ..+
T Consensus         5 ~~~~Ly~~~~----~~s~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~--------------------g~v   60 (215)
T 3bby_A            5 PAITLWSDAH----FFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGYGQT--------------------RRV   60 (215)
T ss_dssp             CCEEEEEETT----SCCHHHHHHHHHHHHHTCCCEEEEEC--------------------------------------CC
T ss_pred             CCEEEEecCC----CCCcHHHHHHHHHHHcCCCCEEEEecCccccccCHHHHhhCCC--------------------CCC
Confidence            5789999751    16899999999999999999998887532  122344433221                    134


Q ss_pred             CCCCEEEECCeEEechHHHHHHHH
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                         |.|..||..|.....+.+..+
T Consensus        61 ---P~L~~~g~~l~eS~aI~~yL~   81 (215)
T 3bby_A           61 ---PLLQIDDFELSESSAIAEYLE   81 (215)
T ss_dssp             ---CEEEETTEEEESHHHHHHHHH
T ss_pred             ---CEEEeCCeEeecHHHHHHHHH
Confidence               999999999998888877554

>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A

Probab=96.65  E-value=0.015  Score=42.56  Aligned_cols=37  Identities=16%  Similarity=0.290  Sum_probs=27.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+..      ++.|..+|++.+++
T Consensus        21 ~lv~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~   63 (109)
T 2yzu_A           21 VLVDFWAE------WCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPK   63 (109)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHH
T ss_pred             EEEEEECC------CCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHh
Confidence            35566666      999999988777653      47888899887653

>1z9h_A Membrane-associated prostaglandin E synthase-2; membran associated protein, indomethacin, isomerase; HET: IMN; 2.60A {Macaca fascicularis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pbj_A*

Probab=96.65  E-value=0.0021  Score=57.47  Aligned_cols=72  Identities=8%  Similarity=0.213  Sum_probs=51.7

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      .+..++||+..      .|++|.+|+.+|+.+||+|+.++|+...  +.|++ +.+                    ..++
T Consensus        11 ~~~~~~Ly~~~------~sp~~~~v~~~L~~~gi~~~~~~v~~~~--~~~~~-~~p--------------------~~~v   61 (290)
T 1z9h_A           11 SRLQLTLYQYK------TCPFCSKVRAFLDFHALPYQVVEVNPVL--RAEIK-FSS--------------------YRKV   61 (290)
T ss_dssp             --CEEEEEECT------TCHHHHHHHHHHHHTTCCEEEEECCTTT--CGGGT-TCS--------------------CCSS
T ss_pred             CCCCEEEEeCC------CChHHHHHHHHHHHcCCCeEEEECChhh--HHHHH-HcC--------------------CCCC
Confidence            34569999998      9999999999999999999999996321  12221 111                    1244


Q ss_pred             CCCCEEEEC--C--eEEechHHHHHHHH
Q 041824          196 PVLPRVFVK--G--RYVGGAEEVLRIVE  219 (289)
Q Consensus       196 ~~LPqIFI~--G--~~IGG~del~~L~E  219 (289)
                         |.|.++  |  ..|.....+.++.+
T Consensus        62 ---P~l~~~~~g~~~~l~eS~aI~~yL~   86 (290)
T 1z9h_A           62 ---PILVAQEGESSQQLNDSSVIISALK   86 (290)
T ss_dssp             ---CEEEEEETTEEEEECSHHHHHHHHH
T ss_pred             ---CEEEECCCCCeEEecCHHHHHHHHH
Confidence               999984  3  68888888877654

>4dej_A Glutathione S-transferase related protein; transferase-like protein, transcription regulation; 2.90A {Idiomarina loihiensis}

Probab=96.65  E-value=0.0061  Score=52.61  Aligned_cols=74  Identities=15%  Similarity=0.186  Sum_probs=56.2

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      ...+.||+..      .|++|.+|+.+|+..||+|+.+.|+.. ...+++.++....                   ..+ 
T Consensus        10 ~~~~~Ly~~~------~sp~~~~vr~~L~~~gi~~e~~~v~~~-~~~~~~~~~nP~~-------------------g~v-   62 (231)
T 4dej_A           10 RSVMTLYSGK------DDLKSHQVRLVLAEKGVGVEITYVTDE-STPEDLLQLNPYP-------------------EAK-   62 (231)
T ss_dssp             CSSCEEEECS------SCHHHHHHHHHHHHHTCBCEEEECCSS-CCCHHHHHHCCSS-------------------SCC-
T ss_pred             CceEEEEcCC------CChHHHHHHHHHHHcCCCcEEEEcCcc-cCCHHHHHhCCCC-------------------CCC-
Confidence            3458999999      999999999999999999999998754 2234455443220                   134 


Q ss_pred             CCCEEEECCeEEechHHHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E  219 (289)
                        |.+..||..|.....+.+..+
T Consensus        63 --PvL~~~g~~l~eS~aI~~YL~   83 (231)
T 4dej_A           63 --PTLVDRELVLYNAQIIMEYLD   83 (231)
T ss_dssp             --SEEEETTEEEESHHHHHHHHH
T ss_pred             --CEEEECCEEEEcHHHHHHHHH
Confidence              999999999998888877554

>4iel_A Glutathione S-transferase, N-terminal domain PROT; GST, glutathione S-transferase, enzyme function initiative, structural genomics; HET: GSH; 1.60A {Burkholderia ambifaria}

Probab=96.62  E-value=0.0037  Score=53.27  Aligned_cols=72  Identities=8%  Similarity=0.055  Sum_probs=52.6

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      -+.||+..      .|++|.+|+.+|+.+||+|+.+.|+...  ...+++.++...                       .
T Consensus        23 m~~Ly~~~------~sp~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~P~-----------------------g   73 (229)
T 4iel_A           23 MLHILGKI------PSINVRKVLWLCTELNLPFEQEDWGAGFRTTNDPAYLALNPN-----------------------G   73 (229)
T ss_dssp             CEEEESCT------TCHHHHHHHHHHHHHTCCEEEECCC-------CHHHHTTCTT-----------------------C
T ss_pred             eEEEecCC------CCcchHHHHHHHHHCCCCcEEEEecCCcCCcCCHHHHhcCCC-----------------------C
Confidence            48999998      9999999999999999999999887532  122333332111                       2


Q ss_pred             CCCEEEECCeEEechHHHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E  219 (289)
                      .+|.+.+||..|.....+.++.+
T Consensus        74 ~vP~L~~~g~~l~eS~aI~~yL~   96 (229)
T 4iel_A           74 LVPVIKDDGFVLWESNTIIRYLA   96 (229)
T ss_dssp             CSCEEEETTEEEECHHHHHHHHH
T ss_pred             CCCEEEECCEEEEeHHHHHHHHH
Confidence            34999999999998888877554

>3m8n_A Possible glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, nysgxrc; 2.04A {Rhodopseudomonas palustris}

Probab=96.60  E-value=0.0056  Score=51.89  Aligned_cols=74  Identities=11%  Similarity=0.149  Sum_probs=55.0

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      ..+.||+..      .|++|.+|+.+|+..||+|+.+.|+...  ....++.++...                       
T Consensus         2 ~~~~Ly~~~------~sp~~~~vr~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~-----------------------   52 (225)
T 3m8n_A            2 SLYKLYSMQ------RSGNSYKVRLALALLDAPYRAVEVDILRGESRTPDFLAKNPS-----------------------   52 (225)
T ss_dssp             CCEEEEECT------TCHHHHHHHHHHHHTTCCEEEEECCGGGTTTSSHHHHTTCTT-----------------------
T ss_pred             CceEEecCC------CCCCHHHHHHHHHHcCCCeEEEEeCCCCCccCCHHHHHhCCC-----------------------
Confidence            358899999      9999999999999999999999887532  122334332111                       


Q ss_pred             CCCCEEEE-CCeEEechHHHHHHHHh
Q 041824          196 PVLPRVFV-KGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       196 ~~LPqIFI-~G~~IGG~del~~L~E~  220 (289)
                      ..+|.|.+ ||..|.....+.+..+.
T Consensus        53 g~vP~L~~~~g~~l~eS~aI~~yL~~   78 (225)
T 3m8n_A           53 GQVPLLETAPGRYLAESNAILWYLAV   78 (225)
T ss_dssp             CCSSEEECSTTCEEECHHHHHHHHHT
T ss_pred             CCCCEEEeCCCCEEEcHHHHHHHHHc
Confidence            23499997 77899988888877665

>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1

Probab=96.60  E-value=0.021  Score=42.31  Aligned_cols=39  Identities=10%  Similarity=0.250  Sum_probs=28.9

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      ..-||.|+++      +|++|+++...|+.    +  .|.|..+|++.+++
T Consensus        26 ~~~lv~f~~~------~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~   70 (115)
T 1thx_A           26 QPVLVYFWAS------WCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPT   70 (115)
T ss_dssp             SCEEEEEECT------TCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHH
T ss_pred             ceEEEEEECC------CCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHH
Confidence            3346666666      99999998877764    3  48888999987753

>3ic8_A Uncharacterized GST-like proteinprotein; glutathione, transferase, PSI, MCSG, structural genomics; 2.40A {Pseudomonas syringae PV}

Probab=96.58  E-value=0.0053  Score=55.16  Aligned_cols=73  Identities=14%  Similarity=0.062  Sum_probs=56.2

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      ..++||...      .+++|.+++.+|+.+||+|+.+.|+... ...++.++.+-.                   ..+  
T Consensus         2 ~~~~Ly~~~------~sp~~~kvr~~L~~~gi~ye~~~v~~~~-~~~~~~~~n~P~-------------------g~v--   53 (310)
T 3ic8_A            2 SELILHHYP------TSLFAEKARLMLGFKGVNWRSVTIPSIM-PKPDLTALTGGY-------------------RKT--   53 (310)
T ss_dssp             CCEEEEECT------TCGGGHHHHHHHHHHTCEEEEEECCSSS-CCHHHHHHHSSC-------------------CCS--
T ss_pred             CeEEEEecC------CCcHHHHHHHHHHhcCCCcEEEEcCCCC-CcHHHHHhcCCC-------------------Cce--
Confidence            468999999      8999999999999999999999887521 234555554211                   134  


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                       |.|.+||..|.....+.++.+
T Consensus        54 -PvL~~~g~~l~eS~aI~~yL~   74 (310)
T 3ic8_A           54 -PVLQIGADIYCDTALMARRLE   74 (310)
T ss_dssp             -CEEEETTEEECSHHHHHHHHH
T ss_pred             -eEEEECCEEEcCHHHHHHHHH
Confidence             999999999988887776544

>1ljr_A HGST T2-2, glutathione S-transferase; HET: GSH; 3.20A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 2ljr_A 3ljr_A*

Probab=96.58  E-value=0.0064  Score=52.41  Aligned_cols=71  Identities=10%  Similarity=0.112  Sum_probs=53.7

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.||+..      .|++|.+|+.+|+..||+|+.+.|+...  ...+++.++...                    ..+  
T Consensus         3 ~~Ly~~~------~sp~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~nP~--------------------g~v--   54 (244)
T 1ljr_A            3 LELFLDL------VSQPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSL--------------------GKL--   54 (244)
T ss_dssp             CEEEECT------TSHHHHHHHHHHHHTTCCCEEEECCTTTTGGGSHHHHTTCTT--------------------CCS--
T ss_pred             EEEEecC------CCcchHHHHHHHHHcCCCCeEEEecccccccCCHHHHHhCCC--------------------CcC--
Confidence            6799988      8999999999999999999999987642  223444433211                    134  


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                       |.+..||..|.....+.+..+
T Consensus        55 -P~L~d~g~~l~eS~aI~~YL~   75 (244)
T 1ljr_A           55 -PTLKDGDFILTESSAILIYLS   75 (244)
T ss_dssp             -CEEEETTEEEECHHHHHHHHH
T ss_pred             -cEEEECCEEEEchHHHHHHHH
Confidence             999999999999888877544

>1k0d_A URE2 protein; nitrate assimilation, structural genomics, gene regulation; HET: GSH; 2.20A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5 PDB: 1jzr_A* 1k0b_A* 1k0c_A* 1k0a_A* 1g6w_A 1g6y_A 1hqo_A

Probab=96.57  E-value=0.0096  Score=51.92  Aligned_cols=74  Identities=7%  Similarity=0.022  Sum_probs=54.9

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      +..+.||+..      .|++|.+|+.+|+..||+|+.+.|+...  ....++.++...                    ..
T Consensus        17 m~~~~Ly~~~------~~p~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~--------------------g~   70 (260)
T 1k0d_A           17 LEGYTLFSHR------SAPNGFKVAIVLSELGFHYNTIFLDFNLGEHRAPEFVSVNPN--------------------AR   70 (260)
T ss_dssp             SSSEEEEECT------TCHHHHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHTTCTT--------------------CC
T ss_pred             CCcEEEEcCC------CCccHHHHHHHHHHCCCCceEEEecCccccccCHHHHhhCCC--------------------CC
Confidence            4679999998      9999999999999999999998887532  223444433211                    13


Q ss_pred             CCCCCEEEE---CCeEEechHHHHHHHH
Q 041824          195 PPVLPRVFV---KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       195 v~~LPqIFI---~G~~IGG~del~~L~E  219 (289)
                      +   |.+..   ||..|.....+.+..+
T Consensus        71 v---P~L~~~~~~g~~l~ES~aI~~YL~   95 (260)
T 1k0d_A           71 V---PALIDHGMDNLSIWESGAILLHLV   95 (260)
T ss_dssp             S---CEEEEGGGTTEEEESHHHHHHHHH
T ss_pred             c---CEEEecCCCCeEEECHHHHHHHHH
Confidence            4   99988   7888988877776543

>4ags_A Thiol-dependent reductase 1; transferase, leishmaniasis, DE-gluathionylation; HET: MSE GSH; 2.30A {Leishmania infantum}

Probab=96.56  E-value=0.0079  Score=56.75  Aligned_cols=75  Identities=13%  Similarity=0.229  Sum_probs=57.8

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      +..++||+..      .|++|.+|+.+|+.+||+|+.+.|+......+++.++....                    .+ 
T Consensus        24 ~~~~~Ly~~~------~sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~nP~g--------------------~v-   76 (471)
T 4ags_A           24 ARALKLYVSA------TCPFCHRVEIVAREKQVSYDRVAVGLREEMPQWYKQINPRE--------------------TV-   76 (471)
T ss_dssp             -CCEEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCCGGGCCHHHHHHCTTC--------------------CS-
T ss_pred             CCceEEECCC------CCchHHHHHHHHHHcCCCCEEEEeCCCCCccHHHHhhCCCC--------------------cc-
Confidence            4579999998      99999999999999999999999986433344565553321                    34 


Q ss_pred             CCCEEEECC---eEEechHHHHHHHHh
Q 041824          197 VLPRVFVKG---RYVGGAEEVLRIVEE  220 (289)
Q Consensus       197 ~LPqIFI~G---~~IGG~del~~L~E~  220 (289)
                        |.|.+++   ..|.....+.+..++
T Consensus        77 --P~L~~~~~~g~~l~eS~aI~~yL~~  101 (471)
T 4ags_A           77 --PTLEVGNADKRFMFESMLIAQYLDN  101 (471)
T ss_dssp             --CEEEECSSSCEEEESHHHHHHHHHH
T ss_pred             --CeEEECCcCeEEEecHHHHHHHHHH
Confidence              9999987   888888888776544

>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1

Probab=96.54  E-value=0.0037  Score=53.99  Aligned_cols=37  Identities=14%  Similarity=0.366  Sum_probs=28.2

Q ss_pred             CCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhC---CCcEEEEEcC
Q 041824          115 DGENKVVIYTTTLRGIRKTYEACKAAKSVIENF---GVAVSERDVS  157 (289)
Q Consensus       115 ~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~---gV~y~ErDVs  157 (289)
                      .+...|++|+..      +|++|++....|+.+   +|.+..+.+.
T Consensus        85 ~~k~~vv~F~d~------~Cp~C~~~~~~l~~~~~~~v~v~~~~~p  124 (211)
T 1t3b_A           85 NEKHVVTVFMDI------TCHYCHLLHQQLKEYNDLGITVRYLAFP  124 (211)
T ss_dssp             TCSEEEEEEECT------TCHHHHHHHTTHHHHHHTTEEEEEEECC
T ss_pred             CCCEEEEEEECC------CCHhHHHHHHHHHHHHhCCcEEEEEECC
Confidence            445568889998      999999987777654   7888777664

>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}

Probab=96.54  E-value=0.017  Score=42.39  Aligned_cols=37  Identities=14%  Similarity=0.215  Sum_probs=27.8

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+..      ++.|..+|++.+++
T Consensus        23 ~lv~f~~~------~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~   65 (107)
T 2i4a_A           23 VLVDFWAE------WCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPE   65 (107)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCH
T ss_pred             EEEEEECC------CChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHH
Confidence            35556666      999999998887652      57888899887653

>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A {Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*

Probab=96.54  E-value=0.0068  Score=50.80  Aligned_cols=71  Identities=14%  Similarity=0.168  Sum_probs=54.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.||+..      .|++|.+|+.+|+..||+|+.+.|+...  ....++.++...                    ..+  
T Consensus         1 m~Ly~~~------~s~~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~P~--------------------g~v--   52 (219)
T 3f6d_A            1 MDFYYLP------GSAPCRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKLNPQ--------------------HCI--   52 (219)
T ss_dssp             CEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHHHCTT--------------------CCS--
T ss_pred             CEEEeCC------CCCchHHHHHHHHHcCCCceEEEccCcccccCCHHHHhhCCC--------------------Ccc--
Confidence            4689988      9999999999999999999999887532  223455554321                    134  


Q ss_pred             CCEEEE-CCeEEechHHHHHHHH
Q 041824          198 LPRVFV-KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI-~G~~IGG~del~~L~E  219 (289)
                       |.+.. ||..|.....+.+..+
T Consensus        53 -P~L~~~~g~~l~eS~aI~~yL~   74 (219)
T 3f6d_A           53 -PTLVDEDGFVLWESRAIQIYLV   74 (219)
T ss_dssp             -CEEECTTSCEEESHHHHHHHHH
T ss_pred             -CeEEeCCCCEEEcHHHHHHHHH
Confidence             99999 9999998888877554

>1r5a_A Glutathione transferase; glutathione S-transferase, GST, GSH, mosquito, detoxification, xenobiotics; HET: GTS; 2.50A {Anopheles cracens} SCOP: a.45.1.1 c.47.1.5

Probab=96.53  E-value=0.011  Score=49.76  Aligned_cols=72  Identities=15%  Similarity=0.222  Sum_probs=53.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      .++||+..      .|++|.+|+.+|+..||+|+.+.|+...  ....++.++...                    ..+ 
T Consensus         2 ~~~Ly~~~------~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~nP~--------------------g~v-   54 (218)
T 1r5a_A            2 TTVLYYLP------ASPPCRSVLLLAKMIGVELDLKVLNIMEGEQLKPDFVELNPQ--------------------HCI-   54 (218)
T ss_dssp             CEEEEECT------TCHHHHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHTTCTT--------------------CCS-
T ss_pred             eEEEEeCC------CChhHHHHHHHHHHcCCCCeEEecCcccccccCHHHHhhCCC--------------------CCc-
Confidence            37899988      8999999999999999999999987642  122344432111                    134 


Q ss_pred             CCCEEEECCeEEechHHHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E  219 (289)
                        |.+..||..|.....+.+..+
T Consensus        55 --P~L~~~g~~l~eS~aI~~yL~   75 (218)
T 1r5a_A           55 --PTMDDHGLVLWESRVILSYLV   75 (218)
T ss_dssp             --SEEEETTEEEECHHHHHHHHH
T ss_pred             --CEEEECCEEEEcHHHHHHHHH
Confidence              999999999988888777544

>2hnl_A Glutathione S-transferase 1; prostaglandin synthase, river BLI onchocerca volvulus, immune modulation; HET: GSH; 2.00A {Onchocerca volvulus}

Probab=96.53  E-value=0.0069  Score=51.69  Aligned_cols=72  Identities=10%  Similarity=0.074  Sum_probs=54.3

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      +..++||+..      .+++|.+++.+|+..||+|+.+.|+.  +...++.++..                    .   .
T Consensus        25 m~~~~Ly~~~------~s~~~~~vr~~L~~~gi~ye~~~v~~--~~~~~~~~~nP--------------------~---g   73 (225)
T 2hnl_A           25 MEKYTLTYFN------GRGRAEVIRLLFALANVSYEDNRITR--DEWKYLKPRTP--------------------F---G   73 (225)
T ss_dssp             CCCEEEEEES------SSGGGHHHHHHHHHHTCCCEEEEECH--HHHHHHGGGSS--------------------S---S
T ss_pred             CCCeEEEEcC------CCCchHHHHHHHHHCCCCeeEEEeCh--hhhHHhccCCC--------------------C---C
Confidence            5579999998      88999999999999999999999874  22233332211                    1   2


Q ss_pred             CCCEEEECCeEEechHHHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E  219 (289)
                      .+|.+..||..|.....+.++.+
T Consensus        74 ~vPvL~~~g~~l~eS~aI~~YL~   96 (225)
T 2hnl_A           74 HVPMLNVSGNVLGESHAIELLLG   96 (225)
T ss_dssp             CSCEEEETTEEEECHHHHHHHHH
T ss_pred             CCCEEEECCEEEecHHHHHHHHH
Confidence            34999999999998888777554

>2gsq_A Squid GST, glutathione S-transferase; squid digestive gland, sigma class; HET: GBI; 2.20A {Ommastrephes sloani} SCOP: a.45.1.1 c.47.1.5 PDB: 1gsq_A*

Probab=96.52  E-value=0.0077  Score=49.94  Aligned_cols=71  Identities=15%  Similarity=0.178  Sum_probs=53.9

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      ++.+|+..      .+++|.+++.+|+..||+|+.+.|+.+.  ..++++....              |      .+   
T Consensus         2 ~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~--~~~~~~~~P~--------------g------~v---   50 (202)
T 2gsq_A            2 KYTLHYFP------LMGRAELCRFVLAAHGEEFTDRVVEMAD--WPNLKATMYS--------------N------AM---   50 (202)
T ss_dssp             CEEEEECS------SSGGGHHHHHHHHHTTCCCEEEECCTTT--HHHHGGGSGG--------------G------SS---
T ss_pred             CcEEEEcC------CCchhHHHHHHHHHcCCCeeEEEeCHHH--HHhhcccCCC--------------C------CC---
Confidence            47899988      8899999999999999999999998632  2344332211              1      34   


Q ss_pred             CEEEECCeEEechHHHHHHHHh
Q 041824          199 PRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E~  220 (289)
                      |.+..||..|.....+.+..++
T Consensus        51 P~L~~~g~~l~eS~aI~~yL~~   72 (202)
T 2gsq_A           51 PVLDIDGTKMSQSMCIARHLAR   72 (202)
T ss_dssp             CEEEETTEEECCHHHHHHHHHH
T ss_pred             CEEEECCEEEecHHHHHHHHHH
Confidence            9999999999988888776543

>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1

Probab=96.52  E-value=0.03  Score=41.16  Aligned_cols=39  Identities=8%  Similarity=0.186  Sum_probs=28.6

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      ..-||.|+++      +|++|++....|+.    +  .+.+..+|++.+++
T Consensus        20 ~~~lv~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~   64 (107)
T 1dby_A           20 VPVLVDFWAP------WCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPN   64 (107)
T ss_dssp             SCEEEEEECT------TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred             CcEEEEEECC------CCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHH
Confidence            3345666666      99999998877765    3  47788888887654

>3ibh_A GST-II, saccharomyces cerevisiae GTT2; glutathione S-transferase, transferase; HET: GSH; 2.10A {Saccharomyces cerevisiae} PDB: 3erf_A* 3erg_A*

Probab=96.51  E-value=0.0071  Score=50.91  Aligned_cols=73  Identities=12%  Similarity=0.135  Sum_probs=54.1

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCC--cEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGV--AVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV--~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      .+++||...      .|++|.+|+-+|+.+||  +|+.++|+...  ....++.++...                    .
T Consensus        17 ~~~~Ly~~~------~sp~~~~v~~~L~~~gi~~~~~~~~v~~~~~~~~~~~~~~~nP~--------------------g   70 (233)
T 3ibh_A           17 QKMIIYDTP------AGPYPARVRIALAEKNMLSSVQFVRINLWKGEHKKPEFLAKNYS--------------------G   70 (233)
T ss_dssp             --CEEEECT------TCHHHHHHHHHHHHTTCGGGCEEEECCGGGTGGGSHHHHHHCTT--------------------C
T ss_pred             cceEEecCC------CCCccHHHHHHHHhcCCCCCceEEEeccccccccChHHhccCCC--------------------C
Confidence            479999999      89999999999999999  99998887532  223455554321                    1


Q ss_pred             CCCCCCEEE-ECCeEEechHHHHHHHH
Q 041824          194 LPPVLPRVF-VKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       194 tv~~LPqIF-I~G~~IGG~del~~L~E  219 (289)
                      .+   |.+. .||..|.....+.++.+
T Consensus        71 ~v---P~L~~~~g~~l~eS~aI~~yL~   94 (233)
T 3ibh_A           71 TV---PVLELDDGTLIAECTAITEYID   94 (233)
T ss_dssp             CS---CEEECTTCCEEESHHHHHHHHH
T ss_pred             cc---ceEEecCCeEEecHHHHHHHHH
Confidence            34   9999 68888988887776544

>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C

Probab=96.50  E-value=0.033  Score=40.61  Aligned_cols=39  Identities=21%  Similarity=0.295  Sum_probs=28.1

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      ..-|+.|+++      +|++|+++...|+.    +  .+.+..+|++.+++
T Consensus        19 ~~~~v~f~~~------~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~   63 (105)
T 1fb6_A           19 VPVMVDFWAP------WCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPG   63 (105)
T ss_dssp             SCEEEEEECT------TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred             CcEEEEEECC------CChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHH
Confidence            3345666666      99999998887764    3  37788888887653

>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A

Probab=96.50  E-value=0.025  Score=42.00  Aligned_cols=37  Identities=27%  Similarity=0.325  Sum_probs=28.0

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+.    +  ++.|..+|++.+++
T Consensus        27 ~vv~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~   69 (112)
T 1ep7_A           27 IVVDFTAT------WCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAA   69 (112)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHH
T ss_pred             EEEEEECC------CCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHH
Confidence            45666666      99999998887765    3  58888899886643

>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...

Probab=96.49  E-value=0.033  Score=40.74  Aligned_cols=39  Identities=26%  Similarity=0.239  Sum_probs=30.0

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHh-----CCCcEEEEEcCCChh
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIEN-----FGVAVSERDVSMDRG  161 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~-----~gV~y~ErDVs~d~~  161 (289)
                      ..-||.|+++      +|++|+++...|+.     .++.+..+|++.+++
T Consensus        21 ~~~~v~f~~~------~C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   64 (105)
T 3m9j_A           21 KLVVVDFSAT------WCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQD   64 (105)
T ss_dssp             SCEEEEEECT------TCHHHHHHHHHHHHHHHHSTTSEEEEEETTTCHH
T ss_pred             CeEEEEEECC------CChhhHHHHHHHHHHHHHccCeEEEEEEhhhhHH
Confidence            3345566666      99999999988876     368889999987654

>3m0f_A Uncharacterized protein GST_N; PSI-2, NYSGXRC, glutathione, structural genomics, protein structure initiative; HET: GSH; 1.60A {Pseudomonas fluorescens} PDB: 3lxt_A*

Probab=96.46  E-value=0.0058  Score=51.01  Aligned_cols=70  Identities=9%  Similarity=0.142  Sum_probs=53.8

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      +.||...      .|++|.+|+.+|+..||+|+.+.|+.... .+++.++....                    .+   |
T Consensus         3 ~~Ly~~~------~sp~~~~v~~~l~~~gi~~e~~~v~~~~~-~~~~~~~nP~g--------------------~v---P   52 (213)
T 3m0f_A            3 LKLIGML------DSPYVRRVAISLKSLGLPFEHHSLSVFST-FEQFKAINPVV--------------------KA---P   52 (213)
T ss_dssp             CEEESCT------TSHHHHHHHHHHHHHTCCCEEECCCTTTT-HHHHHHHCTTC--------------------CS---S
T ss_pred             EEEecCC------CCCcHHHHHHHHHHCCCCcEEEEecCCCC-cHHHHhcCCCC--------------------Cc---C
Confidence            6788888      89999999999999999999998875433 45666553221                    34   9


Q ss_pred             EEE-ECCeEEechHHHHHHHH
Q 041824          200 RVF-VKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       200 qIF-I~G~~IGG~del~~L~E  219 (289)
                      .+. .||..|.....+.+..+
T Consensus        53 ~L~~~~g~~l~eS~aI~~yL~   73 (213)
T 3m0f_A           53 TLVCEGGEVLMDSSLIIDYLE   73 (213)
T ss_dssp             EEECTTCCEEESHHHHHHHHH
T ss_pred             eEEeCCCcEEEcHHHHHHHHH
Confidence            998 68888988877776544

>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0

Probab=96.45  E-value=0.031  Score=41.24  Aligned_cols=39  Identities=15%  Similarity=0.376  Sum_probs=29.2

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCChh
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDRG  161 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~~  161 (289)
                      ..-||.|+++      +|++|+++...|+..      ++.|..+|++.+++
T Consensus        23 ~~vlv~f~a~------~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~   67 (111)
T 3gnj_A           23 KACLVMFSRK------NCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKT   67 (111)
T ss_dssp             CCEEEEEECS------SCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHH
T ss_pred             CEEEEEEeCC------CChhHHHHHHHHHHHHHHcCCceEEEEEECCcChh
Confidence            3446666666      999999998888742      38888999987653

>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A

Probab=96.44  E-value=0.022  Score=42.56  Aligned_cols=37  Identities=16%  Similarity=0.346  Sum_probs=28.4

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+..     ++.|..+|++.+++
T Consensus        31 ~vv~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~   72 (118)
T 2vm1_A           31 VIIDFTAS------WCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKD   72 (118)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHH
T ss_pred             EEEEEECC------CCHhHHHHhHHHHHHHHHCCCcEEEEEEcccCHH
Confidence            45666666      999999988877653     68888999987643

>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}

Probab=96.43  E-value=0.032  Score=40.60  Aligned_cols=37  Identities=19%  Similarity=0.291  Sum_probs=28.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+..     ++.|..+|++.+++
T Consensus        22 ~~v~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~   63 (104)
T 2vim_A           22 IVVDFFAQ------WCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEE   63 (104)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHH
T ss_pred             EEEEEECC------CCHHHHHhhHHHHHHHHHCCCCEEEEEeccCCHH
Confidence            35556666      999999998888753     78899999987653

>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*

Probab=96.40  E-value=0.015  Score=49.34  Aligned_cols=88  Identities=10%  Similarity=0.136  Sum_probs=53.1

Q ss_pred             cEEEEEecCCC---CCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          119 KVVIYTTTLRG---IRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       119 kVVVYttSLrg---vR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      .|++|--...-   -...||+|.+||.+|..+||+|+.+.|+... ....+..+ |...        .+..-+.....+ 
T Consensus         4 pi~lYd~~~~~~~~~~~~SP~~~kvr~~L~~kgi~y~~~~v~~~~-~~~~~~~~-g~~~--------~~~~~~~~P~~~-   72 (253)
T 4f03_A            4 PIVFYDIPSNERIKHSPWSPNTWKIRYALNYKGLKYKTEWVEYPD-IAGVVQKL-GGKP--------TEKTPDGRDHYT-   72 (253)
T ss_dssp             CEEEEECCCCGGGTTCCCCHHHHHHHHHHHHHTCCEEEEECCGGG-HHHHHHHH-TCCC--------SEECTTCCEECC-
T ss_pred             CeEEeecCCCCCCCCCCcChhHHHHHHHHHHcCCCCEEEEEcccc-chhhhhhc-CCCC--------chhhHhhCCCCc-
Confidence            59999533110   1237999999999999999999999887532 22333333 3220        000000001123 


Q ss_pred             CCCCEEEE--CCeEEechHHHHHHHH
Q 041824          196 PVLPRVFV--KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       196 ~~LPqIFI--~G~~IGG~del~~L~E  219 (289)
                        +|.|..  +|..|.....+.+..+
T Consensus        73 --VPvL~~~d~g~~l~ES~aI~~YL~   96 (253)
T 4f03_A           73 --LPVIYDPNTKKVVEDSAAIAKYLD   96 (253)
T ss_dssp             --SCEEEETTTTEEEESHHHHHHHHH
T ss_pred             --cCeEEeCCCCEEEecHHHHHHHHH
Confidence              499987  5788888777776554

>3niv_A Glutathione S-transferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.30A {Legionella pneumophila subsp}

Probab=96.37  E-value=0.0095  Score=50.12  Aligned_cols=71  Identities=13%  Similarity=0.262  Sum_probs=48.2

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh----hHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR----GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~----~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      +.||+..      .|++|.+|+.+|+..||+|+.+.|+...    ...+++.++...                    ..+
T Consensus         3 ~~Ly~~~------~s~~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~~~P~--------------------g~v   56 (222)
T 3niv_A            3 LILYDYF------RSTACYRVRIALNLKKIAYEKIEVHLVNNGGEQHSLQYHQINPQ--------------------ELV   56 (222)
T ss_dssp             -CEEECT------TCHHHHHHHHHHHHTTCCCCEEECCC---------------------------------------CC
T ss_pred             EEEEcCC------CCcHHHHHHHHHHHcCCCcEEEEeccccccccccCHHHHhcCCC--------------------CCc
Confidence            5789888      8999999999999999999999887543    123344443221                    134


Q ss_pred             CCCCEEEECCeEEechHHHHHHHH
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                         |.|..||..|.....+.+..+
T Consensus        57 ---P~L~~~g~~l~eS~aI~~yL~   77 (222)
T 3niv_A           57 ---PSLDINGQILSQSMAIIDYLE   77 (222)
T ss_dssp             ---SEEEETTEEEECHHHHHHHHH
T ss_pred             ---CEEEECCEEeecHHHHHHHHH
Confidence               999999999998888777554

>3ein_A GST class-theta, glutathione S-transferase 1-1; delta-class GST; HET: GSH; 1.13A {Drosophila melanogaster} PDB: 3mak_A* 3f6f_A 3gh6_A* 1jlv_A*

Probab=96.36  E-value=0.0075  Score=50.15  Aligned_cols=71  Identities=14%  Similarity=0.270  Sum_probs=52.6

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh--HHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG--FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~--~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.||+..      .|++|.+++.+|+..||+|+.+.|+....  ..+++.++...                       ..
T Consensus         2 ~~Ly~~~------~s~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~-----------------------g~   52 (209)
T 3ein_A            2 VDFYYLP------GSSPCRSVIMTAKAVGVELNKKLLNLQAGEHLKPEFLKINPQ-----------------------HT   52 (209)
T ss_dssp             CEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCGGGTGGGSHHHHTTCTT-----------------------CC
T ss_pred             eEEecCC------CCccHHHHHHHHHHcCCCcEEEEcccccCCcCCHHHHhcCCC-----------------------CC
Confidence            4689888      99999999999999999999988875321  23344332111                       13


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                      +|.+..||..|.....+.+..+
T Consensus        53 vP~L~~~g~~l~eS~aI~~yL~   74 (209)
T 3ein_A           53 IPTLVDNGFALWESRAIQVYLV   74 (209)
T ss_dssp             SCEEEETTEEEECHHHHHHHHH
T ss_pred             CCEEEECCEEEEcHHHHHHHHH
Confidence            4999999999998888776544

>3ubk_A Glutathione transferase; GSH binding; 1.95A {Leptospira interrogans serovar lai} PDB: 3ubl_A*

Probab=96.35  E-value=0.0046  Score=53.24  Aligned_cols=71  Identities=10%  Similarity=0.137  Sum_probs=53.2

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      ..++||+..      .|++|.+|+.+|+..||+|+.+.|..+  ...++.++...                    ..+  
T Consensus         2 ~~~~Ly~~~------~sp~~~~v~~~L~~~gi~ye~~~v~~~--~~~~~~~~nP~--------------------g~v--   51 (242)
T 3ubk_A            2 VMIKLHGAS------ISNYVNKVKLGILEKGLEYEQIRIAPS--QEEDFLKISPM--------------------GKI--   51 (242)
T ss_dssp             CCEEEESCT------TCHHHHHHHHHHHHHTCCEEEECCCCC--CCHHHHTTSTT--------------------CCS--
T ss_pred             CeEEEEeCC------CChHHHHHHHHHHHcCCCcEEEecCCc--cCHHHHhcCCC--------------------CCc--
Confidence            348899988      999999999999999999999999543  23344433211                    134  


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                       |.|.++|..|.....+.+..+
T Consensus        52 -PvL~~~~~~l~eS~aI~~YL~   72 (242)
T 3ubk_A           52 -PVLEMDGKFIFESGAILEFLD   72 (242)
T ss_dssp             -CEEEETTEEECCHHHHHHHHH
T ss_pred             -CeEEECCceEecHHHHHHHHH
Confidence             999999988888777776544

>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A

Probab=96.34  E-value=0.015  Score=44.64  Aligned_cols=37  Identities=19%  Similarity=0.258  Sum_probs=29.1

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|+.|+++...|+..     +|.|..+|++.+++
T Consensus        33 vvv~F~a~------wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~~   74 (114)
T 2oe3_A           33 LVIDFYAT------WCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPD   74 (114)
T ss_dssp             EEEEEECT------TCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHH
T ss_pred             EEEEEECC------CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
Confidence            35566666      999999998888764     68899999987754

>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1

Probab=96.33  E-value=0.022  Score=44.31  Aligned_cols=36  Identities=17%  Similarity=0.249  Sum_probs=27.2

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~  161 (289)
                      ||.|+++      +|++|+++...|+..     +|.|..+|++.+++
T Consensus        42 vv~f~a~------wC~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~~~   82 (124)
T 1xfl_A           42 VVDFTAS------WCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKS   82 (124)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHH
T ss_pred             EEEEECC------CCHHHHHHHHHHHHHHHHCCCcEEEEEECccCHH
Confidence            5556666      999999998887753     67788888876643

>1nhy_A EF-1-gamma 1, elongation factor 1-gamma 1; protein synthesis, GST-like, translation; 3.00A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5

Probab=96.33  E-value=0.0068  Score=50.77  Aligned_cols=69  Identities=10%  Similarity=0.053  Sum_probs=52.5

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .++.||+ .      .+++|.+++.+|+..||+|+.+.++   ...+++.++...                    ..+  
T Consensus         2 ~~~~Ly~-~------~~~~~~~v~~~l~~~gi~~e~~~~~---~~~~~~~~~nP~--------------------g~v--   49 (219)
T 1nhy_A            2 SQGTLYA-N------FRIRTWVPRGLVKALKLDVKVVTPD---AAAEQFARDFPL--------------------KKV--   49 (219)
T ss_dssp             TTCEEEC-C------SSHHHHHHHHHHHHHTCCCEEECGG---GCHHHHHHHCTT--------------------CCS--
T ss_pred             CceEEec-C------CCCChHHHHHHHHHcCCCceeeccc---CCCHHHHHHCCC--------------------CCC--
Confidence            4578998 6      7899999999999999999999887   223455544321                    134  


Q ss_pred             CCEEEE-CCeEEechHHHHHHHH
Q 041824          198 LPRVFV-KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI-~G~~IGG~del~~L~E  219 (289)
                       |.+.. ||..|.....+.+..+
T Consensus        50 -P~L~~~~g~~l~eS~aI~~yL~   71 (219)
T 1nhy_A           50 -PAFVGPKGYKLTEAMAINYYLV   71 (219)
T ss_dssp             -SEEECGGGCEEESHHHHHHHHH
T ss_pred             -CeEEcCCCCEEecHHHHHHHHH
Confidence             99998 8889988888777554

>4hz2_A Glutathione S-transferase domain; glutathione,enzyme function initiative; HET: GSH; 1.50A {Xanthobacter autotrophicus}

Probab=96.33  E-value=0.011  Score=50.58  Aligned_cols=74  Identities=18%  Similarity=0.162  Sum_probs=56.6

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      -+.||...      .|++|.+|+.+|+..||+|+.+.|+...  ...+++.++...                    ..+ 
T Consensus        22 m~~Ly~~~------~sp~~~~vr~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~--------------------g~v-   74 (230)
T 4hz2_A           22 SMRIYGMN------GSGNCWKAAQILSLTGHDFEWVETSSGAAGTRSADFLALNAI--------------------GKV-   74 (230)
T ss_dssp             CCEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCSSTTTTTSHHHHHHCTT--------------------CCS-
T ss_pred             hheeeCCC------CCccHHHHHHHHHHcCCCceEEEecCCCCccCCHHHHhhCCC--------------------CCC-
Confidence            37899998      9999999999999999999998887532  233455554322                    134 


Q ss_pred             CCCEEE-ECCeEEechHHHHHHHHhC
Q 041824          197 VLPRVF-VKGRYVGGAEEVLRIVEEG  221 (289)
Q Consensus       197 ~LPqIF-I~G~~IGG~del~~L~E~G  221 (289)
                        |.+. .||..|.....+.+..++.
T Consensus        75 --PvL~~~~g~~l~eS~aI~~yL~~~   98 (230)
T 4hz2_A           75 --PVVVLDDGTALRESNAILLHFAEG   98 (230)
T ss_dssp             --CEEECTTSCEEECHHHHHHHHHTT
T ss_pred             --CEEEecCCEEeeCHHHHHHHHhcc
Confidence              9999 8999999988888776653

>2wb9_A Glutathione transferase sigma class; thioredoxin fold; HET: GSH; 1.59A {Fasciola hepatica} PDB: 2wdu_A*

Probab=96.30  E-value=0.014  Score=48.57  Aligned_cols=71  Identities=13%  Similarity=0.198  Sum_probs=53.5

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      ..+.||...      .+++|.+++.+|+..||+|+.+.|+.+.  ..++++....              |      .+  
T Consensus         4 ~~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~--~~~~~~~~P~--------------g------~v--   53 (211)
T 2wb9_A            4 QHFKLWYFQ------FRGRAEPIRLLLTCAGVKFEDYQFTMDQ--WPTIKPTLPG--------------G------RV--   53 (211)
T ss_dssp             CEEEEEEES------SCGGGHHHHHHHHHTTCCCEEEEECTTT--HHHHGGGSGG--------------G------CS--
T ss_pred             CceEEEEeC------CCCchHHHHHHHHHcCCCceEEEechhh--HHHhCcCCCC--------------C------CC--
Confidence            468999988      8899999999999999999999987532  2444432211              1      34  


Q ss_pred             CCEEEECC-----eEEechHHHHHHHH
Q 041824          198 LPRVFVKG-----RYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G-----~~IGG~del~~L~E  219 (289)
                       |.+.++|     ..|.....+.+..+
T Consensus        54 -P~L~~~~~~g~~~~l~eS~aI~~yL~   79 (211)
T 2wb9_A           54 -PLLDVTGPDGKLRRYQESMAIARLLA   79 (211)
T ss_dssp             -CEEEEECTTSCEEEEESHHHHHHHHH
T ss_pred             -CEEEECCCCccceeecCHHHHHHHHH
Confidence             9999988     88988887777554

>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A

Probab=96.28  E-value=0.037  Score=41.85  Aligned_cols=37  Identities=19%  Similarity=0.224  Sum_probs=28.4

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC----CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF----GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~----gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+..    ++.+..+|++.+++
T Consensus        36 ~vv~f~a~------wC~~C~~~~~~~~~~~~~~~~~~~~vd~~~~~~   76 (117)
T 2xc2_A           36 VVVDFFAT------WCGPCKTIAPLFKELSEKYDAIFVKVDVDKLEE   76 (117)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHTTSSSEEEEEETTTSHH
T ss_pred             EEEEEECC------CCHhHHHHhHHHHHHHHHcCcEEEEEECCccHH
Confidence            45566676      999999998888754    78888889876643

>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A

Probab=96.27  E-value=0.0096  Score=51.33  Aligned_cols=37  Identities=14%  Similarity=0.374  Sum_probs=28.2

Q ss_pred             CCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhC---CCcEEEEEcC
Q 041824          115 DGENKVVIYTTTLRGIRKTYEACKAAKSVIENF---GVAVSERDVS  157 (289)
Q Consensus       115 ~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~---gV~y~ErDVs  157 (289)
                      .+...|++|+..      +|++|++....|+.+   +|.+..+.+.
T Consensus        85 ~~k~~vv~F~d~------~Cp~C~~~~~~l~~l~~~~v~v~~~~~p  124 (216)
T 1eej_A           85 QEKHVITVFTDI------TCGYCHKLHEQMADYNALGITVRYLAFP  124 (216)
T ss_dssp             TCCEEEEEEECT------TCHHHHHHHTTHHHHHHTTEEEEEEECC
T ss_pred             CCCEEEEEEECC------CCHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence            445568888888      999999988777654   7888777663

>1vf1_A Glutathione S-transferase 3; detoxification; HET: GSH; 1.77A {Gallus gallus} PDB: 1vf2_A* 1vf3_A* 1vf4_A

Probab=96.24  E-value=0.021  Score=48.68  Aligned_cols=75  Identities=16%  Similarity=0.134  Sum_probs=54.3

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      ..+.||+..      .+++|.+|+.+|+..||+|+.+.|+.... ..+++......                  ...+  
T Consensus         3 ~~~~Ly~~~------~s~~~~~vr~~L~~~gi~ye~~~v~~~~~-~~~~~~~~~nP------------------~g~v--   55 (229)
T 1vf1_A            3 AKPVLYYFN------GRGKMESIRWLLAAAGVEFEEVFLETREQ-YEKLLQSGILM------------------FQQV--   55 (229)
T ss_dssp             CCCEEEECS------SCTTTHHHHHHHHHTTCCCEEEECCSHHH-HHHHHHHTCST------------------TSCS--
T ss_pred             CCeEEEEeC------CCchhHHHHHHHHHcCCCCeeEecCcHHH-HHHHHHhcCCC------------------CCCC--
Confidence            457899988      88999999999999999999999874222 23344331011                  1134  


Q ss_pred             CCEEEECCeEEechHHHHHHHHh
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E~  220 (289)
                       |.+..||..|.....+.+..++
T Consensus        56 -P~L~~~g~~l~eS~aI~~YL~~   77 (229)
T 1vf1_A           56 -PMVEIDGMKLVQTRAILNYIAG   77 (229)
T ss_dssp             -CEEEETTEEEESHHHHHHHHHH
T ss_pred             -CEEEECCEEEEcHHHHHHHHHH
Confidence             9999999999988888776543

>1k3y_A GSTA1-1, glutathione S-transferase A1; S-hexyl glutatione, water structu transferase; HET: GTX; 1.30A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1gsf_A* 1guh_A* 1gsd_A* 1k3o_A 1k3l_A* 1pl1_A* 1pkz_A 1pkw_A* 2r6k_A* 1gse_A* 3u6v_A 1usb_A* 1ydk_A* 3q74_A 3ktl_A* 1pl2_A* 2r3x_A* 1xwg_A 3l0h_A* 1ags_A* ...

Probab=96.20  E-value=0.017  Score=48.77  Aligned_cols=75  Identities=13%  Similarity=0.135  Sum_probs=53.8

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      ..+.+|+..      .+++|.+|+.+|+..||+|+.+.|+.... ..++++... .          +       .   ..
T Consensus         2 ~~~~Ly~~~------~s~~~~~vr~~L~~~gi~ye~~~v~~~~~-~~~~~~~~~-n----------P-------~---g~   53 (221)
T 1k3y_A            2 EKPKLHYFN------ARGRMESTRWLLAAAGVEFEEKFIKSAED-LDKLRNDGY-L----------M-------F---QQ   53 (221)
T ss_dssp             CCCEEEEES------SSTTTHHHHHHHHHHTCCCEEEEECSHHH-HHHHHHTTC-C----------T-------T---SC
T ss_pred             CCcEEEEeC------CCchhHHHHHHHHHcCCCceEEEeCchhH-HHHHhhhcC-C----------C-------C---CC
Confidence            457899988      88999999999999999999999874222 223332200 1          0       1   13


Q ss_pred             CCEEEECCeEEechHHHHHHHHh
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E~  220 (289)
                      +|.+..||..|.....+.+..++
T Consensus        54 vPvL~~~g~~l~eS~aI~~yL~~   76 (221)
T 1k3y_A           54 VPMVEIDGMKLVQTRAILNYIAS   76 (221)
T ss_dssp             SCEEEETTEEEESHHHHHHHHHH
T ss_pred             CCEEEECCEEEecHHHHHHHHHH
Confidence            49999999999988888776543

>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...

Probab=96.20  E-value=0.029  Score=41.33  Aligned_cols=37  Identities=14%  Similarity=0.382  Sum_probs=27.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+.    +  .+.+..+|++.+++
T Consensus        23 ~~v~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~   65 (108)
T 2trx_A           23 ILVDFWAE------WCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG   65 (108)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTT
T ss_pred             EEEEEECC------CCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHH
Confidence            35566666      99999998887765    3  47788888887654

>3vk9_A Glutathione S-transferase delta; glutathione binding; 2.00A {Bombyx mori}

Probab=96.19  E-value=0.016  Score=49.02  Aligned_cols=71  Identities=13%  Similarity=0.218  Sum_probs=54.1

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC--hhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD--RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d--~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.+|..+      .+++|++|+-+|+.+||+|+.+.|+..  ....+++.++...                    ..+  
T Consensus         3 mkLY~~~------~S~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~--------------------g~v--   54 (216)
T 3vk9_A            3 IDLYYVP------GSAPCRAVLLTAKALNLNLNLKLVDLHHGEQLKPEYLKLNPQ--------------------HTV--   54 (216)
T ss_dssp             CEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCGGGTGGGSHHHHHHCTT--------------------CCS--
T ss_pred             EEEEeCC------CChhHHHHHHHHHHcCCCCEEEEeCCCCCccCCHHHHHhCCC--------------------Ccc--
Confidence            6799999      899999999999999999998877643  2334555554321                    134  


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                       |.+..||..|.....+.+..+
T Consensus        55 -P~L~d~g~~l~eS~aI~~YL~   75 (216)
T 3vk9_A           55 -PTLVDDGLSIWESRAIITYLV   75 (216)
T ss_dssp             -CEEEETTEEECCHHHHHHHHH
T ss_pred             -ceEecCCceeechHHHHHHHH
Confidence             999999999988888777543

>4ags_A Thiol-dependent reductase 1; transferase, leishmaniasis, DE-gluathionylation; HET: MSE GSH; 2.30A {Leishmania infantum}

Probab=96.19  E-value=0.0074  Score=56.97  Aligned_cols=78  Identities=14%  Similarity=0.138  Sum_probs=57.5

Q ss_pred             CCCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCC
Q 041824          113 PPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQ  192 (289)
Q Consensus       113 pp~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~  192 (289)
                      ++..+.+++||...      .|++|.+++.+|+..||+|+.+.|+... ..+++.++...                    
T Consensus       246 ~~~~~~~~~L~~~~------~sp~~~rv~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~P~--------------------  298 (471)
T 4ags_A          246 MMGANGGHVLYSNL------FCPFVDRARLASELRKFQMHIVEVPLHP-QPEWYKYINPR--------------------  298 (471)
T ss_dssp             TGGGTTSCEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCCSS-CCTTHHHHCTT--------------------
T ss_pred             CCCCCCcEEEEecC------CCchHHHHHHHHHHCCCCcEEEEecCCc-CcHHHHHhCCC--------------------
Confidence            34566789999999      9999999999999999999999987641 12233333221                    


Q ss_pred             CCCCCCCEEEE-CCeEEechHHHHHHHHh
Q 041824          193 PLPPVLPRVFV-KGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       193 ~tv~~LPqIFI-~G~~IGG~del~~L~E~  220 (289)
                      .++   |.|.+ ||..|.....+.+..++
T Consensus       299 g~v---P~L~~~~g~~l~eS~aI~~yL~~  324 (471)
T 4ags_A          299 DTV---PALFTPSGEAVHESQLIVQYIDC  324 (471)
T ss_dssp             CCS---CEEECTTSCEEESHHHHHHHHHH
T ss_pred             CCc---CeEEeCCCcEeecHHHHHHHHHh
Confidence            134   99987 88888888777766543

>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B

Probab=96.17  E-value=0.058  Score=40.62  Aligned_cols=37  Identities=24%  Similarity=0.184  Sum_probs=28.6

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh-----CCCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN-----FGVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~-----~gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|++....|+.     .++.|..+|++.+++
T Consensus        27 vlv~f~a~------wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~   68 (109)
T 3f3q_A           27 VVVDFYAT------WCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGD   68 (109)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHH
T ss_pred             EEEEEECC------cCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
Confidence            35556666      99999999888875     268888999987654

>1m0u_A GST2 gene product; flight muscle protein, sigma, transferase; HET: GSH; 1.75A {Drosophila melanogaster} SCOP: a.45.1.1 c.47.1.5

Probab=96.15  E-value=0.017  Score=50.87  Aligned_cols=72  Identities=13%  Similarity=0.127  Sum_probs=55.1

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      +.++.||...      .|++|.+++.+|+.+||+|+.+.|+.+.  ..+++++...              |      .+ 
T Consensus        47 m~~~~Ly~~~------~s~~~~~vr~~L~~~gi~ye~~~v~~~~--~~e~~~~nP~--------------g------kV-   97 (249)
T 1m0u_A           47 KHSYTLFYFN------VKALAEPLRYLFAYGNQEYEDVRVTRDE--WPALKPTMPM--------------G------QM-   97 (249)
T ss_dssp             CCCEEEEEES------SSGGGHHHHHHHHHHTCCCEEEEECTTT--HHHHGGGSGG--------------G------CS-
T ss_pred             CCCeEEEEcC------CcccHHHHHHHHHHcCCCcEEEEeCHHH--HHHHhhcCCC--------------C------CC-
Confidence            5679999999      8999999999999999999999997532  2344332211              1      34 


Q ss_pred             CCCEEEECCeEEechHHHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E  219 (289)
                        |.+..||..|.....+.++.+
T Consensus        98 --PvL~~~g~~l~ES~aI~~YL~  118 (249)
T 1m0u_A           98 --PVLEVDGKRVHQSISMARFLA  118 (249)
T ss_dssp             --CEEEETTEEEECHHHHHHHHH
T ss_pred             --CEEEECCEEEecHHHHHHHHH
Confidence              999999999988888777654

>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}

Probab=96.13  E-value=0.033  Score=43.92  Aligned_cols=36  Identities=19%  Similarity=0.306  Sum_probs=27.8

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC----CCcEEEEEcCCCh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF----GVAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~----gV~y~ErDVs~d~  160 (289)
                      -||.|+++      +|+.|+++..+|+..    +|.|..+|++.+.
T Consensus        43 vvv~F~a~------wC~~C~~~~p~l~~l~~~~~v~~~~vd~~~~~   82 (133)
T 3cxg_A           43 IVIKFGAV------WCKPCNKIKEYFKNQLNYYYVTLVDIDVDIHP   82 (133)
T ss_dssp             EEEEEECT------TCHHHHHTHHHHHGGGGTEECEEEEEETTTCH
T ss_pred             EEEEEECC------CCHHHHHHHHHHHHHHHhcCEEEEEEeccchH
Confidence            35666777      999999999999875    4667788887654

>3r2q_A Uncharacterized GST-like protein YIBF; transferase, glutathione; HET: GSH; 1.05A {Escherichia coli}

Probab=96.11  E-value=0.0035  Score=51.61  Aligned_cols=71  Identities=7%  Similarity=-0.003  Sum_probs=50.8

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      +.+|+..      .|++|.+++.+|+..||+|+.+.|+... ..+++.++..                    .   ..+|
T Consensus         1 m~Ly~~~------~sp~~~~v~~~l~~~gi~~e~~~v~~~~-~~~~~~~~~P--------------------~---g~vP   50 (202)
T 3r2q_A            1 MKLVGSY------TSPFVRKLSILLLEKGITFEFINELPYN-ADNGVAQFNP--------------------L---GKVP   50 (202)
T ss_dssp             CEEEECS------SCHHHHHHHHHHHHTTCCCEEEECCTTS-SSCSCTTTCT--------------------T---CCSC
T ss_pred             CEEEeCC------CCcHHHHHHHHHHHcCCCCeEEEecCCC-CcHHHHHhCC--------------------C---CCcC
Confidence            4689988      9999999999999999999999987530 1111111111                    1   2349


Q ss_pred             EEE-ECCeEEechHHHHHHHHh
Q 041824          200 RVF-VKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       200 qIF-I~G~~IGG~del~~L~E~  220 (289)
                      .+. .||..|.....+.+..++
T Consensus        51 ~L~~~~g~~l~eS~aI~~yL~~   72 (202)
T 3r2q_A           51 VLVTEEGECWFDSPIIAEYIEL   72 (202)
T ss_dssp             EEECTTSCEECSHHHHHHHHHH
T ss_pred             eEEecCCcEEecHHHHHHHHHH
Confidence            999 689899888887776543

>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}

Probab=96.11  E-value=0.0042  Score=53.18  Aligned_cols=70  Identities=9%  Similarity=0.078  Sum_probs=50.4

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      ..||.+.      +||+|++|+-+|..+||+|+.+.|+.... .+++.++..                    ...+   |
T Consensus        23 MKLy~~~------~SP~~~rVr~~L~e~gi~~e~~~v~~~~~-~~~~~~~nP--------------------~gkV---P   72 (225)
T 4glt_A           23 MKLLYSN------TSPYARKVRVVAAEKRIDVDMVLVVLADP-ECPVADHNP--------------------LGKI---P   72 (225)
T ss_dssp             CEEEECS------SCHHHHHHHHHHHHHTCCCEEEECCTTCS-SSCGGGTCT--------------------TCCS---C
T ss_pred             ceEecCC------CCHHHHHHHHHHHHhCCCCEEEEeCCCCC-CHHHHHhCC--------------------CCCC---C
Confidence            4699999      99999999999999999999998875321 012222211                    1134   9


Q ss_pred             EEEE-CCeEEechHHHHHHHH
Q 041824          200 RVFV-KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       200 qIFI-~G~~IGG~del~~L~E  219 (289)
                      .+.+ ||..|.....+.+..+
T Consensus        73 vL~~~dG~~l~ES~aI~~YL~   93 (225)
T 4glt_A           73 VLILPDGESLYDSRVIVEYLD   93 (225)
T ss_dssp             EEECTTSCEECSHHHHHHHHH
T ss_pred             EEEeCCCCEEeehHHHHHHHH
Confidence            9887 6788988877777654

>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*

Probab=96.09  E-value=0.068  Score=40.39  Aligned_cols=38  Identities=18%  Similarity=0.274  Sum_probs=29.0

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh----C-CCcEEEEEcCCChh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN----F-GVAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~-gV~y~ErDVs~d~~  161 (289)
                      .-||.|+++      +|++|+++...|+.    + ++.|..+|++.+++
T Consensus        36 ~~vv~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~   78 (122)
T 2vlu_A           36 LVVIDFTAS------WCGPCRIMAPVFADLAKKFPNAVFLKVDVDELKP   78 (122)
T ss_dssp             CEEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHH
T ss_pred             EEEEEEECC------CCHHHHHHHHHHHHHHHHCCCcEEEEEECCCCHH
Confidence            346666666      99999999888775    2 58888999987653

>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}

Probab=96.08  E-value=0.056  Score=41.34  Aligned_cols=33  Identities=9%  Similarity=0.186  Sum_probs=24.8

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh------CCCcEEEEEc
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN------FGVAVSERDV  156 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~------~gV~y~ErDV  156 (289)
                      .-||.|+++      +|++|++....|+.      .+|.|..+|+
T Consensus        28 ~~lv~f~a~------wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~   66 (126)
T 2l57_A           28 PTIIMFKTD------TCPYCVEMQKELSYVSKEREGKFNIYYARL   66 (126)
T ss_dssp             CEEEEEECS------SCHHHHHHHHHHHHHHHHSSSSCEEEEEET
T ss_pred             cEEEEEECC------CCccHHHHHHHHHHHHHHhcCCeEEEEEeC
Confidence            345666666      99999998887765      3678888883

>3ik7_A Glutathione S-transferase A4; human GST A4-4, enzyme, cytoplasm, polymorphism; HET: BOB; 1.97A {Homo sapiens} PDB: 1gum_A 1gul_A*

Probab=96.08  E-value=0.028  Score=47.23  Aligned_cols=74  Identities=16%  Similarity=0.174  Sum_probs=54.6

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      ++++||...      .+++|.+++.+|+..||+|+.+.|+..    +++.++....                  ......
T Consensus         3 ~~~~Ly~~~------~s~~~~~v~~~L~~~gi~ye~~~v~~~----~~~~~~~p~~------------------~~p~g~   54 (222)
T 3ik7_A            3 ARPKLHYPN------GRGRMESVRWVLAAAGVEFDEEFLETK----EQLYKLQDGN------------------HLLFQQ   54 (222)
T ss_dssp             CSCEEEECS------SCTTTHHHHHHHHHTTCCCEEEECCSH----HHHHHHHHTT------------------CSTTSC
T ss_pred             CCcEEEEeC------CCcchHHHHHHHHHcCCCeeEEeeCcH----HHHHHhhhcC------------------CCCCCC
Confidence            368899999      889999999999999999999999753    3444332210                  000123


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                      +|.+..||..|.....+.+..+
T Consensus        55 vP~L~~~g~~l~eS~aI~~yL~   76 (222)
T 3ik7_A           55 VPMVEIDGMKLVQTRSILHYIA   76 (222)
T ss_dssp             SCEEEETTEEEESHHHHHHHHH
T ss_pred             CCEEEECCEEeehHHHHHHHHH
Confidence            4999999999998888777554

>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1

Probab=96.05  E-value=0.025  Score=41.97  Aligned_cols=37  Identities=22%  Similarity=0.328  Sum_probs=27.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChhH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRGF  162 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~~  162 (289)
                      ||.|+++      +|++|+++...|+..     +|.|..+|++.+++.
T Consensus        30 vv~f~~~------~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~   71 (113)
T 1ti3_A           30 VVDFTAS------WCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAV   71 (113)
T ss_dssp             EEEEECS------SCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHH
T ss_pred             EEEEECC------CCHHHHHHHHHHHHHHHhCCCcEEEEEEccccHHH
Confidence            4456666      999999988777653     688888898876543

>2yv7_A CG10997-PA, LD46306P, CLIC; dmclic, chloride ION channel, GST fold, metal transport; 1.70A {Drosophila melanogaster}

Probab=96.05  E-value=0.016  Score=51.48  Aligned_cols=80  Identities=13%  Similarity=0.137  Sum_probs=54.7

Q ss_pred             CCcEEEEEecCC---CCCCCCHHHHHHHHHH----HhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhcc
Q 041824          117 ENKVVIYTTTLR---GIRKTYEACKAAKSVI----ENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAES  189 (289)
Q Consensus       117 ~~kVVVYttSLr---gvR~tC~~C~~ak~iL----~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~  189 (289)
                      +..|++|....+   .....|++|.+|+.+|    +.+||+|+.+.|+... ..+++.++...                 
T Consensus        20 ~~~i~Ly~~~~s~~~~~~~~cP~~~rv~~~L~ll~~~~gi~ye~~~v~~~~-~~~~~~~~nP~-----------------   81 (260)
T 2yv7_A           20 VPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQK-PPPDFRTNFEA-----------------   81 (260)
T ss_dssp             CCEEEEEEEBCTTTSSSBCCCHHHHHHHHHHHHHHHTTSSEEEEEEECTTS-CC-----CCTT-----------------
T ss_pred             CccEEEEEeccCCCCCccCcChHHHHHHHHHHhHHHhcCCCceEEEecccc-CCHHHHhhCCC-----------------
Confidence            457999976643   3346899999999999    8899999998887531 12233332111                 


Q ss_pred             CCCCCCCCCCEEEECCeEEechHHHHHHHHh
Q 041824          190 SVQPLPPVLPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       190 t~~~tv~~LPqIFI~G~~IGG~del~~L~E~  220 (289)
                         ..+   |.+..||..|.....+.++.++
T Consensus        82 ---gkV---PvL~d~g~~l~ES~aI~~YL~~  106 (260)
T 2yv7_A           82 ---THP---PILIDNGLAILENEKIERHIMK  106 (260)
T ss_dssp             ---CCS---CEEEETTEEECSHHHHHHHHHH
T ss_pred             ---CCC---CEEEECCEEEeCHHHHHHHHHH
Confidence               134   9999999999888877776554

>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}

Probab=96.05  E-value=0.03  Score=45.33  Aligned_cols=65  Identities=15%  Similarity=0.167  Sum_probs=49.6

Q ss_pred             CcEEEEE-ecCCCCCCCCHHHHHHHHHHHhC----CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCC
Q 041824          118 NKVVIYT-TTLRGIRKTYEACKAAKSVIENF----GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQ  192 (289)
Q Consensus       118 ~kVVVYt-tSLrgvR~tC~~C~~ak~iL~~~----gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~  192 (289)
                      +.|+||. ++      +|+-|+.+...|+.+    .++|..+||..++..-.++.+.+|-+                   
T Consensus        25 ~~vvi~khat------wCgpc~~~~~~~e~~~~~~~v~~~~vdVde~r~~Sn~IA~~~~V~-------------------   79 (112)
T 3iv4_A           25 KYVFVLKHSE------TCPISANAYDQFNKFLYERDMDGYYLIVQQERDLSDYIAKKTNVK-------------------   79 (112)
T ss_dssp             SEEEEEEECT------TCHHHHHHHHHHHHHHHHHTCCEEEEEGGGGHHHHHHHHHHHTCC-------------------
T ss_pred             CCEEEEEECC------cCHhHHHHHHHHHHHhccCCceEEEEEeecCchhhHHHHHHhCCc-------------------
Confidence            3455555 55      999999998888765    79999999998877777888887753                   


Q ss_pred             CCCCCCCEEEE--CCeEEec
Q 041824          193 PLPPVLPRVFV--KGRYVGG  210 (289)
Q Consensus       193 ~tv~~LPqIFI--~G~~IGG  210 (289)
                         -..||+++  ||+.|.-
T Consensus        80 ---h~sPq~il~k~G~~v~~   96 (112)
T 3iv4_A           80 ---HESPQAFYFVNGEMVWN   96 (112)
T ss_dssp             ---CCSSEEEEEETTEEEEE
T ss_pred             ---cCCCeEEEEECCEEEEE
Confidence               12388876  9988765

>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1

Probab=96.03  E-value=0.08  Score=40.23  Aligned_cols=34  Identities=24%  Similarity=0.199  Sum_probs=26.4

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh-----CCCcEEEEEcC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN-----FGVAVSERDVS  157 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~-----~gV~y~ErDVs  157 (289)
                      .-||.|+++      +|++|++....|+.     .++.|..+|++
T Consensus        39 ~~vv~f~a~------wC~~C~~~~~~l~~~~~~~~~~~~~~vd~~   77 (124)
T 1faa_A           39 PVVLDMFTQ------WCGPCKAMAPKYEKLAEEYLDVIFLKLDCN   77 (124)
T ss_dssp             CEEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEECS
T ss_pred             EEEEEEECC------cCHhHHHHhHHHHHHHHHCCCCEEEEEecC
Confidence            345666666      99999998888865     26888899987

>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A

Probab=96.03  E-value=0.027  Score=45.28  Aligned_cols=38  Identities=13%  Similarity=0.107  Sum_probs=29.6

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~  161 (289)
                      .-||.|+.+      +|+.|+++...|+..     +|.|..+|++.+++
T Consensus        34 ~vvv~F~a~------wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~~   76 (153)
T 2wz9_A           34 LLVVHFWAP------WAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPE   76 (153)
T ss_dssp             CEEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHH
T ss_pred             eEEEEEECC------CCHhHHHHHHHHHHHHHHcCCeEEEEEECCCCHH
Confidence            345666666      999999998888764     78999999987653

>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}

Probab=96.02  E-value=0.032  Score=41.60  Aligned_cols=38  Identities=29%  Similarity=0.316  Sum_probs=26.8

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh-------CCCcEEEEEcCCChh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN-------FGVAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~-------~gV~y~ErDVs~d~~  161 (289)
                      .-||.|+++      +|++|+++...|+.       .++.|..+|++.+++
T Consensus        23 ~~~v~f~a~------wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   67 (112)
T 3d6i_A           23 LIVLYFHTS------WAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSE   67 (112)
T ss_dssp             CEEEEEECC------C--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHH
T ss_pred             EEEEEEECC------CCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHH
Confidence            345566666      99999999888762       368899999987653

>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13

Probab=95.99  E-value=0.031  Score=45.63  Aligned_cols=38  Identities=8%  Similarity=0.107  Sum_probs=28.8

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHH----HHHHhC----CCcEEEEEcC
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAK----SVIENF----GVAVSERDVS  157 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak----~iL~~~----gV~y~ErDVs  157 (289)
                      +.++-.|++|+-.      .||+|.+..    .+++.+    .|++..+++.
T Consensus        25 ~~a~v~i~~f~D~------~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~   70 (175)
T 1z6m_A           25 SNAPVKMIEFINV------RCPYCRKWFEESEELLAQSVKSGKVERIIKLFD   70 (175)
T ss_dssp             TTCSEEEEEEECT------TCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred             CCCCeEEEEEECC------CCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCC
Confidence            3445568889988      999999877    466654    5888888875

>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*

Probab=95.99  E-value=0.066  Score=40.87  Aligned_cols=37  Identities=24%  Similarity=0.208  Sum_probs=28.4

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+..     +|.|..+|++.+++
T Consensus        34 vlv~F~a~------wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~   75 (116)
T 3qfa_C           34 VVVDFSAT------WCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQD   75 (116)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHH
T ss_pred             EEEEEECC------CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
Confidence            35556666      999999999888763     57788899987653

>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1

Probab=95.99  E-value=0.023  Score=39.65  Aligned_cols=49  Identities=12%  Similarity=0.159  Sum_probs=33.3

Q ss_pred             CCHHHHHHHHHHH----hCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEEEECCeEE
Q 041824          133 TYEACKAAKSVIE----NFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYV  208 (289)
Q Consensus       133 tC~~C~~ak~iL~----~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI~G~~I  208 (289)
                      +|+.|+++...|+    .++..+...+|+ +.    ++.+..+..                       .+|.++++|+.+
T Consensus        10 wC~~C~~~~~~l~~~~~~~~~~~~~~~v~-~~----~~~~~~~v~-----------------------~~Pt~~~~G~~~   61 (77)
T 1ilo_A           10 GCANCQMLEKNAREAVKELGIDAEFEKIK-EM----DQILEAGLT-----------------------ALPGLAVDGELK   61 (77)
T ss_dssp             SSSTTHHHHHHHHHHHHHTTCCEEEEEEC-SH----HHHHHHTCS-----------------------SSSCEEETTEEE
T ss_pred             CChhHHHHHHHHHHHHHHcCCceEEEEec-CH----HHHHHCCCC-----------------------cCCEEEECCEEE
Confidence            9999999877654    466677777776 32    344444432                       349999999876


Q ss_pred             e
Q 041824          209 G  209 (289)
Q Consensus       209 G  209 (289)
                      .
T Consensus        62 ~   62 (77)
T 1ilo_A           62 I   62 (77)
T ss_dssp             E
T ss_pred             E
Confidence            4

>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A

Probab=95.98  E-value=0.05  Score=39.83  Aligned_cols=38  Identities=18%  Similarity=0.278  Sum_probs=28.0

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      .-||.|+++      +|++|++....|+.    +  .+.+..+|++.+++
T Consensus        19 ~~~v~f~~~------~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~   62 (105)
T 1nsw_A           19 PVLVDFWAA------WCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPE   62 (105)
T ss_dssp             CEEEEEECT------TCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHH
T ss_pred             cEEEEEECC------CCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHH
Confidence            345666666      99999998887764    3  37888899887653

>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A

Probab=95.94  E-value=0.063  Score=39.10  Aligned_cols=39  Identities=21%  Similarity=0.345  Sum_probs=28.6

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      ..-||.|+++      +|++|+++...|+.    +  .+.+..+|++.+++
T Consensus        20 ~~~lv~f~~~------~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~   64 (106)
T 3die_A           20 GVQLVDFWAT------ACGPCKMIAPVLEELAADYEGKADILKLDVDENPS   64 (106)
T ss_dssp             SEEEEEEECS------BCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred             CcEEEEEECC------CCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHH
Confidence            3345666666      99999999877764    2  37788899887754

>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1

Probab=95.93  E-value=0.063  Score=42.04  Aligned_cols=39  Identities=18%  Similarity=0.241  Sum_probs=29.8

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChh
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRG  161 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~  161 (289)
                      ..-||.|+++      +|++|+++...|+..     +|.|..+|++.+++
T Consensus        38 k~vvv~F~a~------wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~   81 (125)
T 1r26_A           38 ILTVAWFTAV------WCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSE   81 (125)
T ss_dssp             SCEEEEEECT------TCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHH
T ss_pred             CEEEEEEECC------cCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
Confidence            3346666666      999999988887752     68999999987653

>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1

Probab=95.92  E-value=0.048  Score=41.37  Aligned_cols=49  Identities=6%  Similarity=-0.014  Sum_probs=31.8

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHH----hCCCcEEEEEcCCCh--hHHHHHHHHHcc
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIE----NFGVAVSERDVSMDR--GFKEELRELMMR  172 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~----~~gV~y~ErDVs~d~--~~reEL~~llg~  172 (289)
                      .-||.|+.+      +|++|+++...|+    .+++.+..+|++...  +...++.+..+.
T Consensus        31 ~~~v~f~a~------wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i   85 (118)
T 1zma_A           31 TATFFIGRK------TCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGI   85 (118)
T ss_dssp             CEEEEEECT------TCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTC
T ss_pred             eEEEEEECC------CCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCC
Confidence            346666666      9999999765554    457788888887643  233345555443

>1tu7_A Glutathione S-transferase 2; HET: GSH; 1.50A {Onchocerca volvulus} SCOP: a.45.1.1 c.47.1.5 PDB: 1tu8_A*

Probab=95.89  E-value=0.013  Score=48.91  Aligned_cols=70  Identities=7%  Similarity=0.102  Sum_probs=51.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      ++++|+..      .+++|.+|+.+|+..||+|+.+.|+....  .+++++..                    .   ..+
T Consensus         2 ~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~~--~~~~~~nP--------------------~---g~v   50 (208)
T 1tu7_A            2 SYKLTYFS------IRGLAEPIRLFLVDQDIKFIDDRIAKDDF--SSIKSQFQ--------------------F---GQL   50 (208)
T ss_dssp             CEEEEEES------SSGGGHHHHHHHHHTTCCCEEEEECGGGS--TTTGGGST--------------------T---SCS
T ss_pred             CcEEEEcC------CCcchHHHHHHHHHcCCCceEEEEcHHHH--HHhccCCC--------------------C---CCC
Confidence            47899998      88999999999999999999988875321  12222111                    1   134


Q ss_pred             CEEEECCeEEechHHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E  219 (289)
                      |.+..||..|.....+.+..+
T Consensus        51 P~L~~~g~~l~eS~aI~~yL~   71 (208)
T 1tu7_A           51 PCLYDGDQQIVQSGAILRHLA   71 (208)
T ss_dssp             CEEEETTEEEESHHHHHHHHH
T ss_pred             CEEEECCEEEEcHHHHHHHHH
Confidence            999999999988887777554

>3gtu_B Glutathione S-transferase; conjugation, detoxification, cytosolic, heterodimer; 2.80A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5

Probab=95.88  E-value=0.044  Score=46.29  Aligned_cols=78  Identities=14%  Similarity=0.124  Sum_probs=54.2

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh----HHHHHHHHHcccccccCCCCCcchhhccCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG----FKEELRELMMRRRRRSSSSNNNEEEAESSVQ  192 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~----~reEL~~llg~~~~~~~~s~~~~~~g~~t~~  192 (289)
                      ..+++||...      .+++|.+|+.+|+..||+|+.+.|+....    .-+.+..+....         |+        
T Consensus         3 ~~~~~Ly~~~------~s~~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~~~~~~---------~P--------   59 (224)
T 3gtu_B            3 ESSMVLGYWD------IRGLAHAIRLLLEFTDTSYEEKRYTCGEAPDYDRSQWLDVKFKLD---------LD--------   59 (224)
T ss_dssp             CCCEEEEEES------SSGGGHHHHHHHHHTTCCEEEEEECCCCSSSCCCHHHHHHHTTSC---------CS--------
T ss_pred             CCCcEEEEeC------CCcchHHHHHHHHHcCCCceEEEeecCCcccccHHHHHhhhhhcC---------CC--------
Confidence            4568999998      88999999999999999999998875321    112233331110         00        


Q ss_pred             CCCCCCCEEEECCeEEechHHHHHHHH
Q 041824          193 PLPPVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       193 ~tv~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                        ...+|.+..||..|.....+.+..+
T Consensus        60 --~g~vP~L~d~g~~l~eS~aI~~yL~   84 (224)
T 3gtu_B           60 --FPNLPYLLDGKNKITQSNAILRYIA   84 (224)
T ss_dssp             --SCCSSEEEETTEEEESHHHHHHHHH
T ss_pred             --CCCCCEEEECCEEeecHHHHHHHHH
Confidence              1234999888888988887777554

>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}

Probab=95.85  E-value=0.051  Score=42.57  Aligned_cols=37  Identities=16%  Similarity=0.332  Sum_probs=28.0

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+.+...|+.    +  +|.|..+|++.+++
T Consensus        53 vvv~f~~~------~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~   95 (140)
T 1v98_A           53 TLVDFFAP------WCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPG   95 (140)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH
T ss_pred             EEEEEECC------CCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHH
Confidence            45566666      99999999888775    2  47888899987653

>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}

Probab=95.85  E-value=0.035  Score=41.28  Aligned_cols=36  Identities=11%  Similarity=0.054  Sum_probs=26.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~  161 (289)
                      ||.|+++      +|+.|+++...|+..     ++.+..+|++.+++
T Consensus        22 lv~f~a~------wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~~   62 (105)
T 4euy_A           22 LLFIKTE------NCGVCDVMLRKVNYVLENYNYVEKIEILLQDMQE   62 (105)
T ss_dssp             EEEEEES------SCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC--
T ss_pred             EEEEeCC------CCcchHHHHHHHHHHHHHcCCceEEEEECCCCHH
Confidence            5556666      999999998888762     67788899987764

>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1

Probab=95.82  E-value=0.049  Score=40.34  Aligned_cols=37  Identities=22%  Similarity=0.284  Sum_probs=29.1

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+..     ++.|..+|++.+++
T Consensus        24 v~v~f~a~------wC~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   65 (107)
T 1gh2_A           24 AVVKFTMR------GCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQG   65 (107)
T ss_dssp             EEEEEECS------SCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHH
T ss_pred             EEEEEECC------CChhhHHHHHHHHHHHHHCCCcEEEEEECccCHH
Confidence            45666666      999999999888763     68899999987653

>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}

Probab=95.82  E-value=0.11  Score=39.27  Aligned_cols=39  Identities=15%  Similarity=0.113  Sum_probs=29.6

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCChh
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDRG  161 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~~  161 (289)
                      ..-||.|+++      +|++|+++...|+..      +|.|..+|++.+++
T Consensus        22 ~~~lv~f~a~------~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   66 (122)
T 3aps_A           22 THWVVDFYAP------WCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQ   66 (122)
T ss_dssp             SCEEEEEECT------TCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHH
T ss_pred             CeEEEEEECC------CCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHH
Confidence            3346666666      999999998888752      58899999987653

>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A

Probab=95.78  E-value=0.05  Score=39.66  Aligned_cols=37  Identities=24%  Similarity=0.275  Sum_probs=27.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+.    +  ++.+..+|++.+++
T Consensus        23 ~vv~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~   65 (106)
T 1xwb_A           23 VVLDFFAT------WCGPCKMISPKLVELSTQFADNVVVLKVDVDECED   65 (106)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH
T ss_pred             EEEEEECC------cCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHH
Confidence            35556666      99999998877765    3  67788888886643

>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A

Probab=95.76  E-value=0.091  Score=39.41  Aligned_cols=39  Identities=23%  Similarity=0.312  Sum_probs=29.2

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      ..-||.|+++      +|++|+++...|+.    +  ++.|..+|++.+++
T Consensus        31 ~~~lv~f~~~------~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~   75 (121)
T 2i1u_A           31 KPVLVDFWAT------WCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPE   75 (121)
T ss_dssp             SCEEEEEECT------TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred             CcEEEEEECC------CCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHH
Confidence            3346666666      99999999887764    2  58888999987653

>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A

Probab=95.73  E-value=0.066  Score=39.34  Aligned_cols=37  Identities=22%  Similarity=0.425  Sum_probs=27.4

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC---------CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF---------GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~---------gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+..         +|.+..+|++.+++
T Consensus        24 ~lv~f~~~------~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   69 (111)
T 3uvt_A           24 TFIKFYAP------WCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN   69 (111)
T ss_dssp             EEEEEECS------SCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHH
T ss_pred             EEEEEECC------CChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHh
Confidence            46667777      999999998887652         46677888876653

>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}

Probab=95.70  E-value=0.072  Score=42.01  Aligned_cols=39  Identities=15%  Similarity=0.342  Sum_probs=29.1

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCChh
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDRG  161 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~~  161 (289)
                      ..-||.|+++      +|+.|+++...|+..      .|.|..+|++.+++
T Consensus        25 ~~vlv~F~a~------wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~   69 (140)
T 3hz4_A           25 KPVVVMFYSP------ACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPW   69 (140)
T ss_dssp             SCEEEEEECT------TCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHH
T ss_pred             CcEEEEEECC------CChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHh
Confidence            3346667777      999999988877653      38888999987754

>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}

Probab=95.68  E-value=0.075  Score=40.78  Aligned_cols=38  Identities=16%  Similarity=0.194  Sum_probs=29.9

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh-----CCCcEEEEEcCCChh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN-----FGVAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~-----~gV~y~ErDVs~d~~  161 (289)
                      .-||.|+++      +|++|+++...|+.     .++.|..+|++.+++
T Consensus        25 ~vlv~f~a~------wC~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~   67 (118)
T 2f51_A           25 LVLVDFFAT------WCGPCQRLGQILPSIAEANKDVTFIKVDVDKNGN   67 (118)
T ss_dssp             CEEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHH
T ss_pred             EEEEEEECC------CCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCHH
Confidence            345666666      99999999888876     478999999987753

>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A

Probab=95.68  E-value=0.11  Score=39.08  Aligned_cols=45  Identities=11%  Similarity=0.076  Sum_probs=30.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChhHHHHHHHH
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRGFKEELREL  169 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~~reEL~~l  169 (289)
                      -|+.|..+      +|++|.+....|+..     ++.+..++++.+.+..+++.+.
T Consensus        28 ~ll~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (136)
T 1zzo_A           28 AVLWFWAP------WCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNK   77 (136)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHH
T ss_pred             EEEEEEcC------CChhHHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHH
Confidence            35556666      999999887766654     6888888887655444444333

>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0

Probab=95.67  E-value=0.1  Score=38.02  Aligned_cols=36  Identities=8%  Similarity=0.173  Sum_probs=27.2

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      ||.|+++      +|++|++....|+.    +  .+.|..+|++.+++
T Consensus        25 lv~f~~~------~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~   66 (109)
T 3tco_A           25 LVDCWAE------WCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQK   66 (109)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHH
T ss_pred             EEEEECC------CCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHH
Confidence            5566666      99999998877764    3  37788899887654

>3tou_A Glutathione S-transferase protein; GSH binding site, GSH; HET: GSH; 1.75A {Ralstonia solanacearum} PDB: 3tot_A*

Probab=95.67  E-value=0.011  Score=50.11  Aligned_cols=71  Identities=4%  Similarity=0.012  Sum_probs=51.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      +.||+..      .|++|.+++.+|+..||+|+.+.|+..... +++.++..                    .   ..+|
T Consensus         3 ~~Ly~~~------~sp~~~~vr~~L~~~gi~ye~~~v~~~~~~-~~~~~~nP--------------------~---g~vP   52 (226)
T 3tou_A            3 MKLIGSH------ASPYTRKVRVVLAEKKIDYQFVLEDVWNAD-TQIHQFNP--------------------L---GKVP   52 (226)
T ss_dssp             CEEEECS------SCHHHHHHHHHHHHTTCCCEEEECCTTSTT-CCGGGTCT--------------------T---CCSC
T ss_pred             EEEecCC------CCchHHHHHHHHHHcCCCcEEEecCccCCc-HHHHHhCC--------------------C---CCCC
Confidence            5789998      999999999999999999999988753211 11211111                    1   2349


Q ss_pred             EEEE-CCeEEechHHHHHHHHh
Q 041824          200 RVFV-KGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       200 qIFI-~G~~IGG~del~~L~E~  220 (289)
                      .+.+ ||..|.....+.+..++
T Consensus        53 vL~~~~g~~l~eS~aI~~yL~~   74 (226)
T 3tou_A           53 CLVMDDGGALFDSRVIAEYADT   74 (226)
T ss_dssp             EEECTTSCEECSHHHHHHHHHH
T ss_pred             EEEeCCCCEeccHHHHHHHHHH
Confidence            9997 78888888887776543

>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}

Probab=95.65  E-value=0.067  Score=41.04  Aligned_cols=38  Identities=24%  Similarity=0.246  Sum_probs=28.5

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhC-------CCcEEEEEcCCChh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENF-------GVAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~-------gV~y~ErDVs~d~~  161 (289)
                      .-||.|+++      +|+.|+++...|+..       +|.|..+|++.+++
T Consensus        35 ~vvv~f~a~------~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~   79 (121)
T 2j23_A           35 VVVIDFWAT------WCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQ   79 (121)
T ss_dssp             CEEEEEECT------TCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHH
T ss_pred             EEEEEEECC------CCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHH
Confidence            345566666      999999999888752       38888999987654

>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}

Probab=95.63  E-value=0.11  Score=38.40  Aligned_cols=37  Identities=11%  Similarity=0.328  Sum_probs=27.6

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      -||.|+.+      +|++|++....|+.    +  .+.+..+|++.+++
T Consensus        26 ~vv~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~   68 (112)
T 1t00_A           26 VLVDFWAA------WCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPG   68 (112)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred             EEEEEECC------CCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHH
Confidence            45666666      99999988877764    3  47788899887653

>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.58  E-value=0.082  Score=40.40  Aligned_cols=37  Identities=19%  Similarity=0.329  Sum_probs=28.8

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh-------CCCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN-------FGVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~-------~gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+.       .+|.|..+|++.+.+
T Consensus        25 vlv~f~a~------wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~   68 (126)
T 1x5e_A           25 WMIEFYAP------WCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPG   68 (126)
T ss_dssp             EEEEEECS------SCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHH
T ss_pred             EEEEEECC------CCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHH
Confidence            46666666      99999999888765       268899999987654

>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}

Probab=95.58  E-value=0.024  Score=44.48  Aligned_cols=36  Identities=8%  Similarity=0.230  Sum_probs=26.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCCh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~  160 (289)
                      -||.|+++      +|++|+++...|+.    +  +|.|..+|++.++
T Consensus        43 vlv~F~a~------wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~   84 (128)
T 2o8v_B           43 ILVDFWAE------WCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNP   84 (128)
T ss_dssp             EEEEEECS------SCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCC
T ss_pred             EEEEEECC------CCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH
Confidence            35666666      99999998877764    3  4778888887664

>1b48_A GST, mgsta4-4, protein (glutathione S-transferase); subunit cooperativity; HET: HAG GSH; 2.60A {Mus musculus} SCOP: a.45.1.1 c.47.1.5 PDB: 1guk_A

Probab=95.56  E-value=0.013  Score=49.64  Aligned_cols=75  Identities=13%  Similarity=0.130  Sum_probs=52.8

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .++++|+..      .+++|.+++.+|+..||+|+.+.|+..+. ..++++. +..          +       .   ..
T Consensus         2 ~~~~Ly~~~------~s~~~~~v~~~L~~~gi~ye~~~v~~~~~-~~~~~~~-~~n----------P-------~---g~   53 (221)
T 1b48_A            2 AKPKLYYFN------GRGRMESIRWLLAAAGVEFEEEFLETREQ-YEKMQKD-GHL----------L-------F---GQ   53 (221)
T ss_dssp             CCCEEEBCS------SCTTTHHHHHHHHHHTCCCCCCBCCCHHH-HHHHHTT-TCS----------S-------S---SC
T ss_pred             CceEEEEeC------CCcchHHHHHHHHHcCCCceEEEeCchHh-HHHHHhc-CCC----------C-------C---CC
Confidence            467899988      88999999999999999999888863221 2222221 001          1       1   13


Q ss_pred             CCEEEECCeEEechHHHHHHHHh
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E~  220 (289)
                      +|.+..||..|.....+.+..++
T Consensus        54 vP~L~~~g~~l~eS~aI~~YL~~   76 (221)
T 1b48_A           54 VPLVEIDGMMLTQTRAILSYLAA   76 (221)
T ss_dssp             SCEEEETTEEECCHHHHHHHHHH
T ss_pred             CCEEEECCEEEecHHHHHHHHHH
Confidence            49999999999888887775543

>2yv9_A Chloride intracellular channel EXC-4; chloride ION channel, CLIC, GST fold, metal transport; 1.60A {Caenorhabditis elegans}

Probab=95.55  E-value=0.074  Score=47.85  Aligned_cols=80  Identities=11%  Similarity=0.085  Sum_probs=57.1

Q ss_pred             CCCCcEEEEEecCC--CC-CCCCHHHHHHHHHH----HhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhh
Q 041824          115 DGENKVVIYTTTLR--GI-RKTYEACKAAKSVI----ENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEA  187 (289)
Q Consensus       115 ~~~~kVVVYttSLr--gv-R~tC~~C~~ak~iL----~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g  187 (289)
                      +.+..|.+|....+  +. ...|++|++|+.+|    +.+||+|+.+.|+....  . ++++...               
T Consensus        15 ~~~~~i~Ly~~~~~~~~~~~~~cP~~~rv~~~L~lL~e~kgi~ye~~~vd~~~~--p-fl~~nP~---------------   76 (291)
T 2yv9_A           15 QSKPLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNVNSE--A-FKKNFLG---------------   76 (291)
T ss_dssp             GGSCEEEEEEEBCSSCTTSBCCCHHHHHHHHHHHHHHHTTSCEEEEEEECTTCH--H-HHHHHTT---------------
T ss_pred             CCCCCEEEEEecCCCCcCccCcChHHHHHHHHHHHHHHhcCceeEEEEeCCCCh--h-HHhcCCC---------------
Confidence            34556999988743  22 24799999999999    78899999988876422  2 4444321               


Q ss_pred             ccCCCCCCCCCCEEEE--CCeEEechHHHHHHHHh
Q 041824          188 ESSVQPLPPVLPRVFV--KGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       188 ~~t~~~tv~~LPqIFI--~G~~IGG~del~~L~E~  220 (289)
                           ..+   |.+..  ||..|.-...+.++.++
T Consensus        77 -----GkV---PvL~d~~~g~~l~ES~aI~~YL~~  103 (291)
T 2yv9_A           77 -----AQP---PIMIEEEKELTYTDNREIEGRIFH  103 (291)
T ss_dssp             -----CCS---CEEEEGGGTEEECSHHHHHHHHHH
T ss_pred             -----CCC---CEEEEcCCCeEEeCHHHHHHHHHH
Confidence                 135   99988  89999888888776654

>3cbu_A Probable GST-related protein; thioredoxin fold, GST C-terminal domain-like fold, structura genomics, joint center for structural genomics; 2.05A {Ralstonia eutropha}

Probab=95.55  E-value=0.022  Score=47.30  Aligned_cols=67  Identities=9%  Similarity=0.032  Sum_probs=50.4

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      +.||+..      .|++|.+|+.+|+..||+|+.+.|+.. ....++                |+ .         ..+|
T Consensus         3 ~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~----------------~P-~---------g~vP   49 (214)
T 3cbu_A            3 LKLCGFA------ASNYYNKVKLALLEKNVPFEEVLAWIG-ETDTTA----------------TP-A---------GKVP   49 (214)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHTCCEEEEECCTT-SSCTTT----------------ST-T---------CCSC
T ss_pred             EEEecCC------CCcHhHHHHHHHHhCCCCCEEEecCcc-cCCccc----------------CC-C---------CCCC
Confidence            7899988      899999999999999999999998741 000111                11 1         1349


Q ss_pred             EEEECCeEEechHHHHHHHH
Q 041824          200 RVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       200 qIFI~G~~IGG~del~~L~E  219 (289)
                      .+..+|..|.....+.+..+
T Consensus        50 ~L~~~~~~l~eS~aI~~yL~   69 (214)
T 3cbu_A           50 YMITESGSLCESEVINEYLE   69 (214)
T ss_dssp             EEEETTEEECSHHHHHHHHH
T ss_pred             EEEECCeeeecHHHHHHHHH
Confidence            99999999988888777554

>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}

Probab=95.46  E-value=0.14  Score=41.66  Aligned_cols=38  Identities=11%  Similarity=0.115  Sum_probs=28.9

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh------CCCcEEEEEcCCChh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN------FGVAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~------~gV~y~ErDVs~d~~  161 (289)
                      .-||.|+.+      +|++|+.....|+.      .+|.|..+|++.+++
T Consensus        66 ~vlv~F~a~------wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~  109 (155)
T 2ppt_A           66 PLLVDFWAP------WCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPA  109 (155)
T ss_dssp             CEEEEEECT------TCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTH
T ss_pred             cEEEEEECC------CCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHH
Confidence            346666666      99999998887764      258899999987653

>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A

Probab=95.41  E-value=0.071  Score=39.74  Aligned_cols=33  Identities=21%  Similarity=0.099  Sum_probs=25.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVS  157 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs  157 (289)
                      -||.|+++      +|++|+++...|+..     +|.|..+|++
T Consensus        27 vlv~f~a~------wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~   64 (111)
T 2pu9_C           27 VVLDMFTQ------WCGPSKAMAPKYEKLAEEYLDVIFLKLDCN   64 (111)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEECS
T ss_pred             EEEEEECC------cCHhHHHHCHHHHHHHHHCCCeEEEEEecC
Confidence            35556666      999999998888652     6888899997

>2ycd_A Glutathione S-transferase; SOIL bacteria, herbicide detoxification; HET: GTB; 1.40A {Agrobacterium tumefaciens} PDB: 3lq7_A

Probab=95.40  E-value=0.0084  Score=51.09  Aligned_cols=73  Identities=7%  Similarity=0.045  Sum_probs=52.0

Q ss_pred             cEEEEEecCCCCCCCC-----HHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          119 KVVIYTTTLRGIRKTY-----EACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       119 kVVVYttSLrgvR~tC-----~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      +++||...      .|     ++|.+++.+|+..||+|+.+.|+.......++.++..                    . 
T Consensus        18 ~~~Ly~~~------~s~~~~~~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~nP--------------------~-   70 (230)
T 2ycd_A           18 TITVFERS------PDGGRGLARDMPVRWALEEVGQPYHVRRLSFEAMKEASHLAYQP--------------------F-   70 (230)
T ss_dssp             EEEEESSC------TTTTSSCSTHHHHHHHHHHHTCCCEEEEECHHHHTSTTGGGTCT--------------------T-
T ss_pred             eEEEecCC------CccccCCCccHHHHHHHHHcCCCceEEEeCccccCCHHHHhcCC--------------------C-
Confidence            69999988      77     8999999999999999999988741100111111110                    1 


Q ss_pred             CCCCCCEEEECCeEEechHHHHHHHHh
Q 041824          194 LPPVLPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       194 tv~~LPqIFI~G~~IGG~del~~L~E~  220 (289)
                        ..+|.+..||..|.....+.+..++
T Consensus        71 --g~vP~L~~~g~~l~eS~aI~~yL~~   95 (230)
T 2ycd_A           71 --GQIPSYEQGDLILFESGAIVMHIAQ   95 (230)
T ss_dssp             --SCSCEEEETTEEEECHHHHHHHHHH
T ss_pred             --CCCCEEEECCEEEEcHHHHHHHHHH
Confidence              2349999999999988888776543

>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}

Probab=95.28  E-value=0.19  Score=39.60  Aligned_cols=37  Identities=8%  Similarity=0.145  Sum_probs=28.0

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh------CCCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN------FGVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~------~gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|++....|+.      ..+.|..+|++.+++
T Consensus        58 vlv~F~a~------wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~  100 (148)
T 3p2a_A           58 MVIDFWAP------WCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPA  100 (148)
T ss_dssp             EEEEEECS------SCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred             EEEEEECC------CCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHH
Confidence            35566666      99999998887765      257788899887653

>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A

Probab=95.28  E-value=0.11  Score=40.46  Aligned_cols=37  Identities=5%  Similarity=-0.017  Sum_probs=28.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|++....|+..     +|.|..+|++.+++
T Consensus        49 vvv~f~a~------wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~~   90 (139)
T 3d22_A           49 VLANFSAR------WCGPSRQIAPYYIELSENYPSLMFLVIDVDELSD   90 (139)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHH
T ss_pred             EEEEEECC------CCHHHHHHHHHHHHHHHHCCCCEEEEEeCcccHH
Confidence            35556666      999999988887753     68899999987643

>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A

Probab=95.24  E-value=0.033  Score=41.97  Aligned_cols=37  Identities=14%  Similarity=0.118  Sum_probs=28.2

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh------CCCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN------FGVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~------~gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|++....|+.      .+|.|..+|++.+++
T Consensus        20 ~lv~f~a~------wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~   62 (112)
T 2voc_A           20 VLADFWAP------WCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQE   62 (112)
T ss_dssp             EEEEEECT------TBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCS
T ss_pred             EEEEEECC------CCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHH
Confidence            45556666      99999988887765      258899999987654

>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2

Probab=95.20  E-value=0.015  Score=43.21  Aligned_cols=37  Identities=14%  Similarity=0.188  Sum_probs=27.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh---------CCCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN---------FGVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~---------~gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+.         ..|.|..+|++.+++
T Consensus        27 ~lv~f~~~------~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~   72 (120)
T 1mek_A           27 LLVEFYAP------WCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESD   72 (120)
T ss_dssp             EEEEEECS------SCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCS
T ss_pred             EEEEEECC------CCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHH
Confidence            35666776      99999988877764         247788899887653

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=95.18  E-value=0.01  Score=43.85  Aligned_cols=49  Identities=27%  Similarity=0.655  Sum_probs=33.8

Q ss_pred             CcccCCCCcee------EeCCCCCCcceeeeccCCCCcc-ccccCCccCcCCcc---cCCCC
Q 041824          237 GVCQGCADVRF------FPCFRCNGSCKLVINMQPRGKT-AALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       237 ~~C~~Cgg~rf------vpC~~C~GS~K~~~~~~~~g~~-~~~rC~~CNENGLv---rCp~C  288 (289)
                      ..|..|.|.+.      ..|+.|+|+-+++...   |.+ ....|+.|+-.|.+   +|+.|
T Consensus        12 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---g~~~~~~~C~~C~G~G~~~~~~C~~C   70 (79)
T 1exk_A           12 EECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ---GFFAVQQTCPHCQGRGTLIKDPCNKC   70 (79)
T ss_dssp             EECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE---TTEEEEEECTTTTTSSEECSSBCGGG
T ss_pred             eECCCCcccccCCCccCCCCCCCcCeEEEEEEc---CCCEEeeECcCCCCccEECCCcCCCC
Confidence            46777776663      6899999997765432   111 23578888888888   78877

>4ikh_A Glutathione S-transferase; enzyme function initiative, EFI, structural genomics; HET: GSH; 2.10A {Pseudomonas protegens}

Probab=95.17  E-value=0.061  Score=45.88  Aligned_cols=77  Identities=12%  Similarity=0.176  Sum_probs=53.9

Q ss_pred             CCCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccC
Q 041824          113 PPDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESS  190 (289)
Q Consensus       113 pp~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t  190 (289)
                      |+..+..++||...       |++|.+|+.+|+..||+|+.+.|+...  ....++.++...                  
T Consensus        16 ~~~~~~~~~Ly~~~-------~~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~------------------   70 (244)
T 4ikh_A           16 PAQFPEWIQLYSLP-------TPNGVKVSIMLEEIGLPYEAHRVSFETQDQMTPEFLSVSPN------------------   70 (244)
T ss_dssp             CCSSTTSEEEEECS-------SHHHHHHHHHHHHHTCCEEEEECCTTTTTTSSHHHHTTCTT------------------
T ss_pred             cccCCCeeEEEeCC-------CCChHHHHHHHHHcCCCceEEEecCCCCCcCChHHHhcCCC------------------
Confidence            44455689999864       699999999999999999998887542  123344433211                  


Q ss_pred             CCCCCCCCCEEEE----CC--eEEechHHHHHHHH
Q 041824          191 VQPLPPVLPRVFV----KG--RYVGGAEEVLRIVE  219 (289)
Q Consensus       191 ~~~tv~~LPqIFI----~G--~~IGG~del~~L~E  219 (289)
                           ..+|.|.+    ||  ..|.....+.++.+
T Consensus        71 -----g~vP~L~~~dg~dG~~~~l~eS~aI~~yL~  100 (244)
T 4ikh_A           71 -----NKIPAILDPHGPGDQPLALFESGAILIYLA  100 (244)
T ss_dssp             -----SCSCEEEETTCGGGCCEEEESHHHHHHHHH
T ss_pred             -----CCCCEEEecCCCCCCceeEEcHHHHHHHHH
Confidence                 13499998    35  68888877776544

>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}

Probab=95.05  E-value=0.08  Score=42.72  Aligned_cols=36  Identities=11%  Similarity=0.130  Sum_probs=24.3

Q ss_pred             cEEEEE--ecCCCCCCCCHHHHHHHHHH-------Hh--CCCcEEEEEcCCCh
Q 041824          119 KVVIYT--TTLRGIRKTYEACKAAKSVI-------EN--FGVAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYt--tSLrgvR~tC~~C~~ak~iL-------~~--~gV~y~ErDVs~d~  160 (289)
                      .|+||.  .+      +|+.|++....|       +.  .++.+..+|++.+.
T Consensus        49 ~vlv~F~ga~------wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~   95 (154)
T 2ju5_A           49 PIGLFFTGSD------WCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKN   95 (154)
T ss_dssp             CEEEEEECTT------TCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSC
T ss_pred             eEEEEEeCCC------CCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCcccc
Confidence            366655  56      999999888666       21  35667777877653

>4hz4_A Glutathione-S-transferase; enzyme function initiative; 1.62A {Actinobacillus pleuropneumoniae}

Probab=95.04  E-value=0.05  Score=45.59  Aligned_cols=71  Identities=10%  Similarity=0.048  Sum_probs=51.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh---HHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG---FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~---~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      .+++|...      .. .|.+|+-+|+..||+|+.+.|+....   ..+++.++...                       
T Consensus         3 ~~~Ly~~~------~~-~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~nP~-----------------------   52 (217)
T 4hz4_A            3 MITLHYLK------QS-CSHRIVWLLEALGLDYELKIYDRLEGTGFAPEELKAQHPL-----------------------   52 (217)
T ss_dssp             CEEEEEES------SS-TTHHHHHHHHHHTCCCEEEEECCCTTTCCCCHHHHTTSTT-----------------------
T ss_pred             eEEEeecC------CC-cHHHHHHHHHHcCCCceEEEEecCcccccCCHHHHhcCCC-----------------------
Confidence            47899876      44 69999999999999999998876421   13344433211                       


Q ss_pred             CCCCEEEECCeEEechHHHHHHHH
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                      ..+|.+..||..|.....+.+..+
T Consensus        53 g~vP~L~~~g~~l~eS~aI~~yL~   76 (217)
T 4hz4_A           53 GKAPVLQDGDLVLAEGNAIIQHLL   76 (217)
T ss_dssp             CCSCEEEETTEEEECHHHHHHHHH
T ss_pred             CCCCEEEECCEeeecHHHHHHHHH
Confidence            134999999999998888876543

>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}

Probab=94.94  E-value=0.17  Score=39.55  Aligned_cols=38  Identities=11%  Similarity=0.343  Sum_probs=28.7

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      .-||.|+++      +|++|+++...|+.    +  .|.|..+|++.+++
T Consensus        40 ~~lv~f~a~------wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~   83 (136)
T 2l5l_A           40 PAIVDFYAD------WCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQE   83 (136)
T ss_dssp             CEEEEEECT------TSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred             EEEEEEECC------cCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHH
Confidence            346667777      99999998887764    3  48888999987653

>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.94  E-value=0.16  Score=38.68  Aligned_cols=37  Identities=14%  Similarity=0.127  Sum_probs=26.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----------CCCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----------FGVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----------~gV~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|++|+++...|+.          ..|.|..+|++.+++
T Consensus        28 ~lv~f~a~------wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   74 (133)
T 1x5d_A           28 WMVEFYAP------WCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQV   74 (133)
T ss_dssp             EEEEEECT------TCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCH
T ss_pred             EEEEEECC------CCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHH
Confidence            35566666      99999977766543          357788889887653

>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}

Probab=94.88  E-value=0.08  Score=40.90  Aligned_cols=57  Identities=12%  Similarity=0.300  Sum_probs=39.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      ||.|+++      +|++|++....|+..      +|.+..+|++.++    ++.+..+.                     
T Consensus        46 lv~F~a~------wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~----~l~~~~~v---------------------   94 (128)
T 3ul3_B           46 VLYFFAK------WCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNE----SLARKFSV---------------------   94 (128)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCH----HHHHHTTC---------------------
T ss_pred             EEEEECC------CCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH----HHHHHcCC---------------------
Confidence            4556666      999999988877642      4677788887664    34444443                     


Q ss_pred             CCCCCCEEEE--CCeEEe
Q 041824          194 LPPVLPRVFV--KGRYVG  209 (289)
Q Consensus       194 tv~~LPqIFI--~G~~IG  209 (289)
                        ..+|.+++  +|+.+.
T Consensus        95 --~~~Pt~~~~~~G~~~~  110 (128)
T 3ul3_B           95 --KSLPTIILLKNKTMLA  110 (128)
T ss_dssp             --CSSSEEEEEETTEEEE
T ss_pred             --CCcCEEEEEECCEEEE
Confidence              23488877  888665

>1gsu_A GST, CGSTM1-1, class-MU glutathione S-transferase; detoxification enzyme, S-hexyl glutathione; HET: GTX; 1.94A {Gallus gallus} SCOP: a.45.1.1 c.47.1.5 PDB: 1c72_A*

Probab=94.87  E-value=0.1  Score=43.89  Aligned_cols=76  Identities=14%  Similarity=0.083  Sum_probs=51.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh----HHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG----FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~----~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      +.+|...      .+++|.+++.+|+..||+|+.+.|+....    ..+++.++...          +-.      .   
T Consensus         2 ~~L~~~~------~~~~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~~~~~----------~~P------~---   56 (219)
T 1gsu_A            2 VTLGYWD------IRGLAHAIRLLLEYTETPYQERRYKAGPAPDFDPSDWTNEKEKL----------GLD------F---   56 (219)
T ss_dssp             EEEEEES------SSGGGHHHHHHHHHTTCCEEEEEECCCSTTSCCTHHHHTTGGGS----------CCS------S---
T ss_pred             cEEEEeC------CCchhHHHHHHHHHcCCCceEEEeccCcccccchhhHhhhcccC----------CCC------C---
Confidence            4688887      78999999999999999999988875321    12333322100          000      1   


Q ss_pred             CCCCEEEECCeEEechHHHHHHHHh
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E~  220 (289)
                      ..+|.+..||..|.....+.+..++
T Consensus        57 g~vP~L~d~g~~l~eS~aI~~yL~~   81 (219)
T 1gsu_A           57 PNLPYLIDGDVKLTQSNAILRYIAR   81 (219)
T ss_dssp             CCSSEEEETTEEEESHHHHHHHHHH
T ss_pred             CCCCEEEECCEEEecHHHHHHHHHH
Confidence            1349999899999988888776543

>2c4j_A Glutathione S-transferase MU 2; glutathione transferase, multigene family; HET: GSO; 1.35A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1xw5_A* 1ykc_A* 2ab6_A* 2gtu_A 3gtu_A 3gur_A* 1hna_A* 1hnb_A* 1hnc_A* 1xw6_A* 1xwk_A* 1yj6_A* 2f3m_A* 2dc5_A 1gtu_A 4gtu_A 6gsu_A* 6gsv_A* 6gsw_A* 2gst_A* ...

Probab=94.72  E-value=0.11  Score=43.56  Aligned_cols=75  Identities=12%  Similarity=0.123  Sum_probs=51.2

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh---HHHHH-HHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG---FKEEL-RELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~---~reEL-~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      +.+|...      .+++|.+|+.+|+..||+|+.+.|+....   .+.+. ..+...                  |.+ .
T Consensus         3 ~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~------------------g~P-~   57 (218)
T 2c4j_A            3 MTLGYWN------IRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKL------------------GLD-F   57 (218)
T ss_dssp             EEEEEES------SSGGGHHHHHHHHHTTCCEEEEEECCCCTTTTCCHHHHTTTTSS------------------CCS-S
T ss_pred             cEEEEeC------CCchhHHHHHHHHHcCCCceEEEeecCcccccchhHHhhhcccc------------------CCC-C
Confidence            6788888      88999999999999999999988875421   12222 211100                  000 1


Q ss_pred             CCCCEEEECCeEEechHHHHHHHH
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                      ..+|.+..||..|.....+.+..+
T Consensus        58 g~vP~L~d~~~~l~eS~aI~~yL~   81 (218)
T 2c4j_A           58 PNLPYLIDGTHKITQSNAILRYIA   81 (218)
T ss_dssp             CCSSEEEETTEEEESHHHHHHHHH
T ss_pred             CCCCEEEECCeEeeeHHHHHHHHH
Confidence            234999888999988888777554

>1oe8_A Glutathione S-transferase; schistosomiasis, detoxifying enzyme, prostaglandin D2 synthase, vaccine candidate; HET: GSH; 1.65A {Schistosoma haematobium} SCOP: a.45.1.1 c.47.1.5 PDB: 1oe7_A* 2c80_A* 2ca8_A* 2f8f_A* 2c8u_A 2caq_A* 2cai_A* 1u3i_A*

Probab=94.68  E-value=0.045  Score=45.40  Aligned_cols=71  Identities=10%  Similarity=0.150  Sum_probs=50.0

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      ..+++|...      .+++|.+++.+|+..||+|+.+.|+...  .++++....                    .   ..
T Consensus         4 ~~~~Ly~~~------~s~~~~~v~~~L~~~gi~~e~~~v~~~~--~~~~~~~~P--------------------~---g~   52 (211)
T 1oe8_A            4 DHIKVIYFN------GRGRAESIRMTLVAAGVNYEDERISFQD--WPKIKPTIP--------------------G---GR   52 (211)
T ss_dssp             CEEEEEESC------TTSTTHHHHHHHHHTTCCCEEEECCTTT--HHHHGGGST--------------------T---SC
T ss_pred             CceEEEEeC------CCChHHHHHHHHHHcCCCceEEEechHh--HHHhcccCC--------------------C---CC
Confidence            468899988      8899999999999999999999997632  122222111                    1   13


Q ss_pred             CCEEEECCeE-----EechHHHHHHHH
Q 041824          198 LPRVFVKGRY-----VGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~-----IGG~del~~L~E  219 (289)
                      +|.+.++|..     |.....+.+..+
T Consensus        53 vP~L~~~~~~g~~~~l~eS~aI~~yL~   79 (211)
T 1oe8_A           53 LPAVKITDNHGHVKWMVESLAIARYMA   79 (211)
T ss_dssp             SCEEEEECTTCCEEEEESHHHHHHHHH
T ss_pred             CCEEEECCccccceeeccHHHHHHHHH
Confidence            4999886643     777777666543

>2fhe_A GST, glutathione S-transferase; transferase-substrate complex; HET: GSH; 2.30A {Fasciola hepatica} SCOP: a.45.1.1 c.47.1.5 PDB: 2wrt_A 1fhe_A*

Probab=94.68  E-value=0.14  Score=42.96  Aligned_cols=75  Identities=12%  Similarity=0.064  Sum_probs=50.8

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      ++.+|.-.      .+++|.+++.+|+..||+|+.+.|+... ..+++.... ..        |.+       .   ..+
T Consensus         1 ~~~L~y~~------~~~~~~~v~~~L~~~gi~ye~~~v~~~~-~~~~~~~~~-~~--------~~P-------~---g~v   54 (216)
T 2fhe_A            1 PAKLGYWK------IRGLQQPVRLLLEYLGEKYEEQIYERDD-GEKWFSKKF-EL--------GLD-------L---PNL   54 (216)
T ss_dssp             CEEEEEES------SSTTTHHHHHHHHHTTCCEEEEEECTTC-HHHHHHHTT-TS--------CCS-------S---CCS
T ss_pred             CcEEEEcC------CCchhHHHHHHHHHcCCCceEEeeCCCc-hhhhhcccc-cc--------CCC-------C---CCC
Confidence            36788887      7899999999999999999999887631 112222211 10        000       1   234


Q ss_pred             CEEEECCeEEechHHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E  219 (289)
                      |.+..||..|.....+.+..+
T Consensus        55 P~L~d~g~~l~eS~aI~~YL~   75 (216)
T 2fhe_A           55 PYYIDDKCKLTQSLAILRYIA   75 (216)
T ss_dssp             SEEECSSCEEESHHHHHHHHH
T ss_pred             CEEEECCEEEEeHHHHHHHHH
Confidence            999888888988887777554

>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=94.62  E-value=0.079  Score=41.02  Aligned_cols=35  Identities=17%  Similarity=0.209  Sum_probs=25.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh-------C--CCcEEEEEcCCCh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN-------F--GVAVSERDVSMDR  160 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~-------~--gV~y~ErDVs~d~  160 (289)
                      ||.|+++      +|++|++....|+.       .  .|.|..+|++.+.
T Consensus        38 lv~f~a~------wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~   81 (140)
T 2dj1_A           38 LLEFYAP------WCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS   81 (140)
T ss_dssp             EEEECCT------TCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH
T ss_pred             EEEEECC------CCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH
Confidence            5555566      99999988776654       1  2778888887664

>4exj_A Uncharacterized protein; transferase-like protein, transcription regulation, transfer structural genomics; 1.64A {Lodderomyces elongisporus nrrl yb-4239}

Probab=94.54  E-value=0.13  Score=43.95  Aligned_cols=69  Identities=10%  Similarity=0.093  Sum_probs=49.1

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC--hhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD--RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d--~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      ++|+.       .|++|.+|+.+|+..||+|+.+.|+..  ....+++.++...                    ..+   
T Consensus         5 lLy~~-------~s~~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~P~--------------------g~v---   54 (238)
T 4exj_A            5 ILYTG-------PTGNGRKPLVLGKLLNAPIKVHMFHWPTKDIQEDWYLKLNPA--------------------GIV---   54 (238)
T ss_dssp             EEEEC-------SSTTTHHHHHHHHHTTCSEEEEECC-CCSGGGSHHHHHHCTT--------------------CCS---
T ss_pred             eEeeC-------CCCchHHHHHHHHHcCCCceEEEecccCCccCCHHHHhhCCC--------------------CCC---
Confidence            37765       379999999999999999999988763  2334455554321                    134   


Q ss_pred             CEEEE-CCeEEechHHHHHHHH
Q 041824          199 PRVFV-KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI-~G~~IGG~del~~L~E  219 (289)
                      |.+.. ||..|.....+.+..+
T Consensus        55 PvL~~~dg~~l~eS~aI~~yL~   76 (238)
T 4exj_A           55 PTLVDDKGTPITESNNILLYIA   76 (238)
T ss_dssp             CEEECTTSCEEESHHHHHHHHH
T ss_pred             CEEEeCCCcEEeeHHHHHHHHH
Confidence            99988 4788988887776543

>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}

Probab=93.53  E-value=0.0065  Score=44.14  Aligned_cols=37  Identities=19%  Similarity=0.288  Sum_probs=25.4

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCCh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDR  160 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~  160 (289)
                      .-||.|+++      +|++|+++...|+..      ++.+..+|++.+.
T Consensus        21 ~~~v~f~~~------~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~   63 (106)
T 2yj7_A           21 PVLVDFWAP------WCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENP   63 (106)
Confidence            346666777      999999998877653      3555566665543

>3iso_A Putative glutathione transferase; GST; HET: GSH; 1.90A {Clonorchis sinensis}

Probab=94.49  E-value=0.063  Score=44.98  Aligned_cols=74  Identities=15%  Similarity=0.076  Sum_probs=50.6

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcC-CChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVS-MDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs-~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +.||...      .+++|.+|+-+|+..||+|+.+.|+ ...  .+.+.......         |+          ...+
T Consensus         3 ~~Ly~~~------~s~~~~~vr~~L~~~gi~ye~~~v~~~~~--~~~~~~~~~~~---------~P----------~g~v   55 (218)
T 3iso_A            3 PVLGYWK------IRGLAQPIRLLLEYVGDSYEEHSYGRCDG--EKWQNDKHNLG---------LE----------LPNL   55 (218)
T ss_dssp             CEEEEES------SSGGGHHHHHHHHHHTCCCEEEEECTTCH--HHHHHHTTSSC---------CS----------SCCS
T ss_pred             cEEEEeC------CCcchHHHHHHHHHcCCCceeeccCCCCH--HHHHhhchhcC---------CC----------CCCC
Confidence            6788888      8899999999999999999999986 211  12222211110         00          1234


Q ss_pred             CEEEECCeEEechHHHHHHHHh
Q 041824          199 PRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E~  220 (289)
                      |.+..||..|.....+.+..++
T Consensus        56 P~L~d~~~~l~eS~aI~~yL~~   77 (218)
T 3iso_A           56 PYYKDGNFSLTQSLAILRYIAD   77 (218)
T ss_dssp             SEEEETTEEEESHHHHHHHHHH
T ss_pred             CeEEECCEEEecHHHHHHHHHH
Confidence            9998888989888777765543

>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A

Probab=94.47  E-value=0.055  Score=45.83  Aligned_cols=54  Identities=19%  Similarity=0.308  Sum_probs=39.8

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      |+.|+++      +|++|+++...|+..     +|.+..+|++.+++    +.+..+.                      
T Consensus       140 ~v~F~a~------wC~~C~~~~~~~~~~~~~~~~v~~~~vd~~~~~~----l~~~~~v----------------------  187 (229)
T 2ywm_A          140 IWVFVTT------SCGYCPSAAVMAWDFALANDYITSKVIDASENQD----LAEQFQV----------------------  187 (229)
T ss_dssp             EEEEECT------TCTTHHHHHHHHHHHHHHCTTEEEEEEEGGGCHH----HHHHTTC----------------------
T ss_pred             EEEEECC------CCcchHHHHHHHHHHHHHCCCeEEEEEECCCCHH----HHHHcCC----------------------
Confidence            3458888      999999999888764     68888999986643    4444443                      


Q ss_pred             CCCCCEEEECCe
Q 041824          195 PPVLPRVFVKGR  206 (289)
Q Consensus       195 v~~LPqIFI~G~  206 (289)
                       ..+|.++++|+
T Consensus       188 -~~~Pt~~~~G~  198 (229)
T 2ywm_A          188 -VGVPKIVINKG  198 (229)
T ss_dssp             -CSSSEEEEGGG
T ss_pred             -cccCEEEECCE
Confidence             23499999887

>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}

Probab=94.43  E-value=0.21  Score=38.45  Aligned_cols=31  Identities=16%  Similarity=0.336  Sum_probs=24.2

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHH--h------CCCcEEEEEc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIE--N------FGVAVSERDV  156 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~--~------~gV~y~ErDV  156 (289)
                      ||.|+++      +|++|++....|+  .      .++.+..+|+
T Consensus        33 lv~f~a~------wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~   71 (133)
T 3fk8_A           33 LLVFGAN------WCTDCRALDKSLRNQKNTALIAKHFEVVKIDV   71 (133)
T ss_dssp             EEEEECT------TCHHHHHHHHHHTSHHHHHHHHHHCEEEEEEC
T ss_pred             EEEEcCC------CCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeC
Confidence            5556666      9999999998887  2      3677888888

>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A

Probab=94.42  E-value=0.35  Score=37.19  Aligned_cols=41  Identities=20%  Similarity=0.239  Sum_probs=29.2

Q ss_pred             CCcEEEEEecC--CCCCCCCHHHHHHHHHHHh------CCCcEEEEEcC
Q 041824          117 ENKVVIYTTTL--RGIRKTYEACKAAKSVIEN------FGVAVSERDVS  157 (289)
Q Consensus       117 ~~kVVVYttSL--rgvR~tC~~C~~ak~iL~~------~gV~y~ErDVs  157 (289)
                      .+.|+||..+-  +.-|.+|++|+++..+|+.      .++.|..+|+.
T Consensus        24 ~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~   72 (123)
T 1wou_A           24 GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVG   72 (123)
T ss_dssp             TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECC
T ss_pred             CCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECC
Confidence            34566666662  2334489999999988876      26778889994

>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A

Probab=94.37  E-value=0.38  Score=37.20  Aligned_cols=37  Identities=14%  Similarity=0.336  Sum_probs=27.2

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      -||.|+.+      +|++|++....|+.    +  .|.+..+|++.+++
T Consensus        54 vlv~f~a~------wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~   96 (141)
T 3hxs_A           54 AIVDFYAD------WCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPE   96 (141)
T ss_dssp             EEEEEECT------TCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred             EEEEEECC------CCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHH
Confidence            35556666      99999998877764    3  47788889887653

>3c8e_A YGHU, glutathione S-transferase homologue; glutathione transferase homologue, E. coli; HET: GSH; 1.50A {Escherichia coli}

Probab=94.33  E-value=0.16  Score=45.29  Aligned_cols=75  Identities=12%  Similarity=0.140  Sum_probs=53.1

Q ss_pred             CCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchh
Q 041824          115 DGENKVVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEE  186 (289)
Q Consensus       115 ~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~  186 (289)
                      .+...+.||+.       .|++|.+|+.+|+..      ||+|+.+.|+...  ...+++.++...              
T Consensus        40 ~~~~~~~Ly~~-------~sp~~~rvr~~L~e~~~~g~kgi~ye~~~v~~~~~e~~~~~~~~~nP~--------------   98 (288)
T 3c8e_A           40 VGKHPLQLYSL-------GTPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPN--------------   98 (288)
T ss_dssp             CCSSSEEEEEC-------SSHHHHHHHHHHHHHHHTTCGGGCEEEEECCGGGTGGGBHHHHHHCTT--------------
T ss_pred             CCCCceEEecC-------CCCChHHHHHHHHHhhhcccCCCCcEEEEeccccccccCHHHHHhCCC--------------
Confidence            34556899963       589999999999998      9999998887532  123455554321              


Q ss_pred             hccCCCCCCCCCCEEEECC----eEEechHHHHHHHH
Q 041824          187 AESSVQPLPPVLPRVFVKG----RYVGGAEEVLRIVE  219 (289)
Q Consensus       187 g~~t~~~tv~~LPqIFI~G----~~IGG~del~~L~E  219 (289)
                            ..+   |.|..+|    ..|.....+.++.+
T Consensus        99 ------gkV---PvL~~~~g~~~~~l~ES~aI~~YL~  126 (288)
T 3c8e_A           99 ------SKI---PALRDHTHNPPIRVFESGSILLYLA  126 (288)
T ss_dssp             ------CCS---CEEEETTSSSCEEEESHHHHHHHHH
T ss_pred             ------CCC---CEEEeCCCCCceEEeCHHHHHHHHH
Confidence                  134   9999875    78888777776544

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.31  E-value=0.036  Score=43.38  Aligned_cols=50  Identities=28%  Similarity=0.656  Sum_probs=34.8

Q ss_pred             CcccCCCCce------eEeCCCCCCcceeeeccCCCCccccccCCccCcCCcc---cCCCC
Q 041824          237 GVCQGCADVR------FFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       237 ~~C~~Cgg~r------fvpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLv---rCp~C  288 (289)
                      ..|..|.|.+      ...|+.|+|+-.+......  ......|+.|+-.|.+   +|+.|
T Consensus        29 ~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~G~--~~~~~~C~~C~G~G~~i~~~C~~C   87 (104)
T 2ctt_A           29 DTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGP--FVMRSTCRRCGGRGSIIISPCVVC   87 (104)
T ss_dssp             EECSSSSSSSSCTTCCCEECSSSSSSCEEEEEETT--EEEEEECSSSSSSSEECSSCCSSS
T ss_pred             eECCCCcCCccCCCCCCccCCCCCCCEEEEEEeCC--EEEEEECCcCCCcceECCCcCCCC
Confidence            5788887765      5789999999766543211  1124678888888877   68877

>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A

Probab=94.30  E-value=0.14  Score=44.96  Aligned_cols=38  Identities=16%  Similarity=0.106  Sum_probs=28.1

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHH----HhCCCcEEEEEcC
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVI----ENFGVAVSERDVS  157 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL----~~~gV~y~ErDVs  157 (289)
                      +.++..|++|+-.      +|++|++....|    +..+|.|..+++.
T Consensus        95 ~~ak~~v~~F~D~------~Cp~C~~~~~~l~~~~~~g~v~v~~~~~p  136 (241)
T 1v58_A           95 KDAPVIVYVFADP------FCPYCKQFWQQARPWVDSGKVQLRTLLVG  136 (241)
T ss_dssp             TTCSEEEEEEECT------TCHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred             CCCCeEEEEEECC------CChhHHHHHHHHHHHHhCCcEEEEEEECC
Confidence            3444468889999      999999985544    4446888888874

>2x64_A Glutathione-S-transferase; detoxification enzyme; HET: GSH; 2.30A {Xylella fastidiosa}

Probab=94.28  E-value=0.097  Score=43.24  Aligned_cols=71  Identities=11%  Similarity=0.088  Sum_probs=50.1

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      .+.+|...      . +.|.+|+.+|+..||+|+.+.|+......+++.++...                       ..+
T Consensus         2 ~~~Ly~~~------~-s~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~P~-----------------------g~v   51 (207)
T 2x64_A            2 HMKLYIMP------G-ACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLALNPS-----------------------GAV   51 (207)
T ss_dssp             CEEEEECT------T-STTHHHHHHHHHHTCCEEEEECCTTTTSSHHHHTTCTT-----------------------CCS
T ss_pred             eEEEEcCC------C-CcHHHHHHHHHHcCCCcceEEecccccCChhHHhcCCC-----------------------CcC
Confidence            46788865      3 35899999999999999999987542112344432111                       134


Q ss_pred             CEEEECCeEEechHHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E  219 (289)
                      |.+..||..|.....+.+..+
T Consensus        52 P~L~~~g~~l~eS~aI~~yL~   72 (207)
T 2x64_A           52 PALQVGDWVLTQNAAILNYIT   72 (207)
T ss_dssp             CEEEETTEEECCHHHHHHHHH
T ss_pred             CeEeECCEEEeeHHHHHHHHH
Confidence            999999999998888877554

>3gx0_A GST-like protein YFCG; transferase, glutathione, glutathione disulfide, disulfide bond oxidoreductase; HET: GDS; 2.30A {Escherichia coli}

Probab=94.23  E-value=0.17  Score=41.94  Aligned_cols=70  Identities=10%  Similarity=0.139  Sum_probs=49.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.||+.       .|++|.+|+.+|+.+||+|+.+.|+...  ...+++.++...                       ..
T Consensus         2 ~~Ly~~-------~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~-----------------------g~   51 (215)
T 3gx0_A            2 IDLYFA-------PTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPN-----------------------NK   51 (215)
T ss_dssp             EEEEEC-------SSHHHHHHHHHHHHHTCCEEEEECCTTTTGGGSHHHHTTCTT-----------------------SC
T ss_pred             eEEEeC-------CCCChHHHHHHHHHcCCCcEEEecCCCCCCCCChHHHHhCCC-----------------------CC
Confidence            567854       3799999999999999999999887643  123344432211                       13


Q ss_pred             CCEEEEC---C----eEEechHHHHHHHH
Q 041824          198 LPRVFVK---G----RYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~---G----~~IGG~del~~L~E  219 (289)
                      +|.+.++   |    ..|.....+.+..+
T Consensus        52 vP~L~~~~~~~dG~~~~l~eS~aI~~yL~   80 (215)
T 3gx0_A           52 IPAIVDHSPADGGEPLSLFESGAILLYLA   80 (215)
T ss_dssp             SCEEEESSCTTCCSCEEEESHHHHHHHHH
T ss_pred             CCEEEeCCCCCCCCceEEEcHHHHHHHHH
Confidence            4999998   4    78888887776544

>3lsz_A Glutathione S-transferase; xenobiotic, biodegradative metabolism, PSI2, NYSGXRC, structural genomics, protein structure initiative; HET: GSH; 1.70A {Rhodobacter sphaeroides}

Probab=94.17  E-value=0.049  Score=45.80  Aligned_cols=70  Identities=7%  Similarity=0.015  Sum_probs=51.2

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC-----h---h-----HHHHHHHHHcccccccCCCCCcchh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD-----R---G-----FKEELRELMMRRRRRSSSSNNNEEE  186 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d-----~---~-----~reEL~~llg~~~~~~~~s~~~~~~  186 (289)
                      +.+|...      .+ +|.+|+.+|+..||+|+.+.|+..     .   +     ..+++.++...              
T Consensus         3 ~~Ly~~~------~s-~~~~v~~~L~~~gi~ye~~~v~~~~~~~d~~~~e~~~~~~~~~~~~~nP~--------------   61 (225)
T 3lsz_A            3 LKIYGVY------RS-RASRPLWLLAELDLPFEHVPVIQANRVAHPHGPEAPLNTASAAYLAVNPL--------------   61 (225)
T ss_dssp             CEEESCS------SS-TTHHHHHHHHHHTCCCEEECCBCGGGSSCTTSTTCCSBTTCHHHHTTCTT--------------
T ss_pred             EEEEeCC------CC-chHHHHHHHHHcCCCcEEEEeecccccccccccccccccCCHHHHhhCcC--------------
Confidence            6789888      88 999999999999999999888642     0   0     22344433211              


Q ss_pred             hccCCCCCCCCCCEEEECCeEEechHHHHHHHH
Q 041824          187 AESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       187 g~~t~~~tv~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                               ..+|.+..||..|.....+.+..+
T Consensus        62 ---------g~vP~L~~~g~~l~eS~aI~~yL~   85 (225)
T 3lsz_A           62 ---------GQIPCLEEEGLILTESLAITLHIA   85 (225)
T ss_dssp             ---------CCSCEEEETTEEEESHHHHHHHHH
T ss_pred             ---------CCCCeEEECCEEEEcHHHHHHHHH
Confidence                     234999999999998888776554

>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}

Probab=94.15  E-value=0.37  Score=37.69  Aligned_cols=34  Identities=9%  Similarity=0.040  Sum_probs=26.2

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----CCCcEEEEEcCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----FGVAVSERDVSM  158 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~gV~y~ErDVs~  158 (289)
                      -||.|+++      +|+.|++....|+.    +++.|..+|+..
T Consensus        34 vlv~F~a~------wC~~C~~~~p~l~~l~~~~~v~~~~vd~~~   71 (135)
T 3emx_A           34 AILAVYSK------TCPHCHRDWPQLIQASKEVDVPIVMFIWGS   71 (135)
T ss_dssp             EEEEEEET------TCHHHHHHHHHHHHHHTTCCSCEEEEEECT
T ss_pred             EEEEEECC------cCHhhhHhChhHHHHHHHCCCEEEEEECCC
Confidence            35566666      99999998877764    568888999954

>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10

Probab=94.14  E-value=0.57  Score=36.30  Aligned_cols=45  Identities=4%  Similarity=0.014  Sum_probs=31.9

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC---C-CcEEEEEcCCChhHHHHHHHH
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF---G-VAVSERDVSMDRGFKEELREL  169 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~---g-V~y~ErDVs~d~~~reEL~~l  169 (289)
                      -||.|..+      +|++|.+....|+..   + |.+..++++.+.+...++.+.
T Consensus        45 ~ll~f~~~------~C~~C~~~~~~l~~l~~~~~v~~v~v~~~~~~~~~~~~~~~   93 (156)
T 1kng_A           45 SLVNVWAS------WCVPCHDEAPLLTELGKDKRFQLVGINYKDAADNARRFLGR   93 (156)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHTTCTTSEEEEEEESCCHHHHHHHHHH
T ss_pred             EEEEEEcc------cCHhHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHH
Confidence            35666666      999999988888765   3 888888887766544444433

>1dug_A Chimera of glutathione S-transferase-synthetic linker-C-terminal fibrinogen gamma...; gamma chain integrin fragment; HET: GSH; 1.80A {Schistosoma japonicum} SCOP: a.45.1.1 c.47.1.5 PDB: 1gne_A* 3qmz_T 1y6e_A 1m9a_A* 1gtb_A* 1gta_A* 1m99_A* 1m9b_A* 1ua5_A* 1u87_A* 1u88_A* 3crt_A* 3cru_A* 3d0z_A*

Probab=94.09  E-value=0.15  Score=43.71  Aligned_cols=75  Identities=11%  Similarity=0.034  Sum_probs=50.9

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      ++++|...      .+++|.+|+.+|+..||+|+.+.|+... ..+++.... ..        |.+       .   ..+
T Consensus         1 ~~~L~y~~------~s~~~~~vr~~L~~~gi~ye~~~v~~~~-~~~~~~~~~-~~--------~~P-------~---g~v   54 (234)
T 1dug_A            1 SPILGYWK------IKGLVQPTRLLLEYLEEKYEEHLYERDE-GDKWRNKKF-EL--------GLE-------F---PNL   54 (234)
T ss_dssp             CCEEEEES------SSGGGHHHHHHHHHHTCCCEEEEECTTC-HHHHHHHTT-SS--------CCS-------S---CCS
T ss_pred             CcEEEEcC------CCCchHHHHHHHHHcCCCceEEEeCCCc-hhhHhhhcc-cc--------CCC-------C---CCC
Confidence            35788888      7899999999999999999999987531 112222211 10        000       1   234


Q ss_pred             CEEEECCeEEechHHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E  219 (289)
                      |.+..||..|.....|.+..+
T Consensus        55 P~L~d~g~~l~eS~aI~~YL~   75 (234)
T 1dug_A           55 PYYIDGDVKLTQSMAIIRYIA   75 (234)
T ss_dssp             SEEECSSCEEESHHHHHHHHH
T ss_pred             CEEEECCEEEecHHHHHHHHH
Confidence            999888888988887777554

>4id0_A Glutathione S-transferase-like protein YIBF; GST, enzyme function initiative, structural genomics; HET: GSF; 1.10A {Pseudomonas fluorescens} PDB: 4ibp_A*

Probab=93.97  E-value=0.033  Score=46.22  Aligned_cols=72  Identities=7%  Similarity=0.068  Sum_probs=49.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh---HHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG---FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~---~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      +.+|...      .|++|.+++.+|+..||+|+.+.|+.+..   ..+++.++..                    .   .
T Consensus         3 ~~Ly~~~------~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~~~nP--------------------~---g   53 (214)
T 4id0_A            3 LTLFHNP------ASPYVRKVMVLLHETGQLNRVALQASQLSPVAPDAALNQDNP--------------------L---G   53 (214)
T ss_dssp             EEEEECS------SCHHHHHHHHHHHHHTCGGGEEEEECCCCSSSCCSSCCTTCT--------------------T---C
T ss_pred             eEEecCC------CCChHHHHHHHHHHcCCCcceEEeecccCccCCcHHHHhcCC--------------------C---c
Confidence            7899998      99999999999999999987655543211   1111111111                    1   2


Q ss_pred             CCCEEE-ECCeEEechHHHHHHHHh
Q 041824          197 VLPRVF-VKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       197 ~LPqIF-I~G~~IGG~del~~L~E~  220 (289)
                      .+|.+. .||..|.....+.+..++
T Consensus        54 ~vP~L~~~~g~~l~eS~aI~~yL~~   78 (214)
T 4id0_A           54 KIPALRLDNGQVLYDSRVILDYLDQ   78 (214)
T ss_dssp             CSSEEECTTSCEECSHHHHHHHHHH
T ss_pred             CCCeEEecCCcEeecHHHHHHHHHH
Confidence            349999 688888888877765543

>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}

Probab=93.93  E-value=0.36  Score=36.95  Aligned_cols=36  Identities=28%  Similarity=0.354  Sum_probs=27.2

Q ss_pred             EEE-EEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChh
Q 041824          120 VVI-YTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVV-YttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~  161 (289)
                      |+| |+++      +|+.|+.+...|+..     ++.|-.+|++.+++
T Consensus        23 vvv~F~a~------wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~   64 (105)
T 3zzx_A           23 VVIDFYAT------WCGPCKMIAPKLEELSQSMSDVVFLKVDVDECED   64 (105)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHCTTEEEEEEETTTCHH
T ss_pred             EEEEEECC------CCCCccCCCcchhhhhhccCCeEEEEEecccCHH
Confidence            444 6666      999999998888653     56778899887654

>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0

Probab=93.92  E-value=0.27  Score=40.65  Aligned_cols=36  Identities=19%  Similarity=0.108  Sum_probs=25.7

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHH----hCC--CcEEEEEcC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIE----NFG--VAVSERDVS  157 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~----~~g--V~y~ErDVs  157 (289)
                      +.-.|+.|+..      +|++|.+....|+    .++  |.|..+.+.
T Consensus        25 ~~~~i~~f~d~------~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~   66 (192)
T 3h93_A           25 GKIEVVELFWY------GCPHCYAFEPTIVPWSEKLPADVHFVRLPAL   66 (192)
T ss_dssp             TSEEEEEEECT------TCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred             CCCEEEEEECC------CChhHHHhhHHHHHHHHhCCCCeEEEEEehh
Confidence            34468899998      9999998877765    343  456666664

>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}

Probab=93.79  E-value=0.12  Score=39.48  Aligned_cols=19  Identities=32%  Similarity=0.302  Sum_probs=14.2

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVI  144 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL  144 (289)
                      ||.|+.+      +|++|++....|
T Consensus        31 lv~f~a~------wC~~C~~~~~~~   49 (130)
T 2kuc_A           31 FVDCFTT------WCGPCKRLSKVV   49 (130)
T ss_dssp             EEEECCT------TCTHHHHHHHHG
T ss_pred             EEEEECC------CCccHHHHHHHh
Confidence            5555555      999999887766

>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}

Probab=93.67  E-value=0.27  Score=40.74  Aligned_cols=38  Identities=18%  Similarity=0.405  Sum_probs=27.7

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMD  159 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d  159 (289)
                      +.-.|++|+..      +|++|.+....|+.    +  +|.|..+++..+
T Consensus        25 ~~~~vv~f~d~------~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~~~   68 (195)
T 3hd5_A           25 GKIEVLEFFAY------TCPHCAAIEPMVEDWAKTAPQDVVLKQVPIAFN   68 (195)
T ss_dssp             TCEEEEEEECT------TCHHHHHHHHHHHHHHHTCCTTEEEEEEECCSS
T ss_pred             CCeEEEEEECC------CCccHHHhhHHHHHHHHHCCCCeEEEEEecccC
Confidence            34468888888      99999987766654    3  466778888643

>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A

Probab=93.66  E-value=0.53  Score=36.58  Aligned_cols=38  Identities=21%  Similarity=0.219  Sum_probs=25.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh-------CCCcEEEEEcCCChhHH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN-------FGVAVSERDVSMDRGFK  163 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~-------~gV~y~ErDVs~d~~~r  163 (289)
                      ||.|..+      +|+.|.+....|..       .+|.+..++++.+++..
T Consensus        30 lv~F~~~------~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~   74 (151)
T 2f9s_A           30 FLNFWGT------WCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAV   74 (151)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHH
T ss_pred             EEEEECC------CCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHH
Confidence            4555666      99999976665543       36888888887665433

>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10

Probab=93.59  E-value=0.83  Score=34.29  Aligned_cols=44  Identities=16%  Similarity=0.166  Sum_probs=29.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C-CCcEEEEEcCCChhHHHHHHH
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F-GVAVSERDVSMDRGFKEELRE  168 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~-gV~y~ErDVs~d~~~reEL~~  168 (289)
                      -||.|..+      +|+.|.+....|+.    + ++.+..++++.+.+..+++.+
T Consensus        27 ~lv~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   75 (136)
T 1lu4_A           27 AVLWFWTP------WCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVS   75 (136)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHH
T ss_pred             EEEEEECC------cChhHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHH
Confidence            35556666      99999987766654    3 677888888775544444433

>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}

Probab=93.46  E-value=0.27  Score=40.49  Aligned_cols=38  Identities=21%  Similarity=0.335  Sum_probs=29.9

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCC-CcEEEEEcC
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFG-VAVSERDVS  157 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~g-V~y~ErDVs  157 (289)
                      +.++..||+|+-.      .|++|+++...|+.++ |++..+++-
T Consensus        12 ~~a~~~vv~f~D~------~Cp~C~~~~~~l~~l~~v~v~~~~~P   50 (147)
T 3gv1_A           12 GNGKLKVAVFSDP------DCPFCKRLEHEFEKMTDVTVYSFMMP   50 (147)
T ss_dssp             TTCCEEEEEEECT------TCHHHHHHHHHHTTCCSEEEEEEECC
T ss_pred             CCCCEEEEEEECC------CChhHHHHHHHHhhcCceEEEEEEcc
Confidence            3455678889988      9999999999998874 566677654

>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A

Probab=93.42  E-value=0.26  Score=38.43  Aligned_cols=48  Identities=10%  Similarity=0.096  Sum_probs=31.2

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHH-------HhC-CCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVI-------ENF-GVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL-------~~~-gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      -||.|+.+      +|++|+++...|       +.+ ++.+..+|++.+.+...++.+..+.
T Consensus        34 vlv~F~a~------wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v   89 (134)
T 2fwh_A           34 VMLDLYAD------WCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNV   89 (134)
T ss_dssp             EEEEEECT------TCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTC
T ss_pred             EEEEEECC------CCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCC
Confidence            35556666      999999976433       233 6888889987654444556555543

>3uar_A Glutathione S-transferase; GSH binding site; HET: GSH; 2.60A {Methylococcus capsulatus} PDB: 3uap_A*

Probab=93.38  E-value=0.1  Score=44.41  Aligned_cols=70  Identities=11%  Similarity=0.209  Sum_probs=49.3

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh---HHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG---FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~---~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      +.||...      .. .|.+|+.+|+..||+|+.+.|+....   ..+++.++...                    ..+ 
T Consensus         3 ~~Ly~~~------~s-~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~nP~--------------------g~v-   54 (227)
T 3uar_A            3 MKLYYFP------GA-CSLAPHIVLREAGLDFELENVDLGTKKTGSGADFLQVNPK--------------------GYV-   54 (227)
T ss_dssp             EEEEECT------TS-TTHHHHHHHHHHTCCEEEEEEETTTTEETTCCBHHHHCTT--------------------CCS-
T ss_pred             EEEecCC------Cc-chHHHHHHHHHcCCCceEEEeccCcCcccCCHHHHHhCCC--------------------CCC-
Confidence            6788876      43 49999999999999999888865431   12344444221                    134 


Q ss_pred             CCCEEEE-CCeEEechHHHHHHHH
Q 041824          197 VLPRVFV-KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI-~G~~IGG~del~~L~E  219 (289)
                        |.+.+ ||..|.....+.++.+
T Consensus        55 --P~L~~~dg~~l~eS~aI~~YL~   76 (227)
T 3uar_A           55 --PALQLDDGQVLTEDQVILQYLA   76 (227)
T ss_dssp             --CEEECTTCCEEECHHHHHHHHH
T ss_pred             --CeEEECCCCEEecHHHHHHHHH
Confidence              99998 6778888888877554

>4ecj_A Glutathione S-transferase; transferase-like protein, transcription regulation; HET: GSH; 1.76A {Pseudomonas aeruginosa} PDB: 4eci_A*

Probab=93.30  E-value=0.22  Score=42.88  Aligned_cols=71  Identities=14%  Similarity=0.162  Sum_probs=49.6

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      -++||..       .|++|.+|+-+|+..||+|+.+.|+...  ....++.++...                    ..+ 
T Consensus         3 m~~Ly~~-------~sp~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~nP~--------------------g~v-   54 (244)
T 4ecj_A            3 MIDLYTA-------ATPNGHKVSIALEEMGLPYRVHALSFDKKEQKAPEFLRINPN--------------------GRI-   54 (244)
T ss_dssp             CEEEEEC-------SSHHHHHHHHHHHHHTCCEEEEECCGGGTGGGSHHHHTTCTT--------------------CCS-
T ss_pred             EEEEecC-------CCcCHHHHHHHHHHcCCCceEEEecCCCCCcCCHHHHhcCCC--------------------CCC-
Confidence            4778864       4799999999999999999999887532  123344433211                    134 


Q ss_pred             CCCEEEEC-C--eEEechHHHHHHHH
Q 041824          197 VLPRVFVK-G--RYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~-G--~~IGG~del~~L~E  219 (289)
                        |.|.++ |  ..|.....+.+..+
T Consensus        55 --PvL~~~dg~~~~l~eS~aI~~YL~   78 (244)
T 4ecj_A           55 --PAIVDRDNDDFAVFESGAILIYLA   78 (244)
T ss_dssp             --CEEEEGGGTTEEEESHHHHHHHHH
T ss_pred             --CEEEECCCCeEEEecHHHHHHHHH
Confidence              999986 4  48888877776554

>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}

Probab=93.20  E-value=0.69  Score=36.58  Aligned_cols=32  Identities=9%  Similarity=0.306  Sum_probs=21.8

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh----C-CCcEEEEEcC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN----F-GVAVSERDVS  157 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~----~-gV~y~ErDVs  157 (289)
                      ||.|..+      +|++|.+....|..    + +|.+..++++
T Consensus        41 lv~F~~~------~C~~C~~~~~~l~~l~~~~~~v~vv~i~~d   77 (165)
T 3ha9_A           41 ILWFMAA------WCPSCVYMADLLDRLTEKYREISVIAIDFW   77 (165)
T ss_dssp             EEEEECT------TCTTHHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred             EEEEECC------CCcchhhhHHHHHHHHHHcCCcEEEEEEec
Confidence            5556666      99999877665554    4 5666667666

>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0

Probab=93.09  E-value=0.9  Score=35.49  Aligned_cols=41  Identities=12%  Similarity=0.115  Sum_probs=27.2

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh-------CCCcEEEEEcCCChhHHHHH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN-------FGVAVSERDVSMDRGFKEEL  166 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~-------~gV~y~ErDVs~d~~~reEL  166 (289)
                      ||.|..+      +|++|.+....|..       .+|.+..++++.+.+..+++
T Consensus        38 lv~f~~~------~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~   85 (165)
T 3or5_A           38 IVNFFAT------WCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNY   85 (165)
T ss_dssp             EEEEECT------TSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHH
T ss_pred             EEEEEcC------cCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHH
Confidence            5556666      99999987766654       24677777777665544444

>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}

Probab=93.07  E-value=0.39  Score=39.38  Aligned_cols=35  Identities=17%  Similarity=0.064  Sum_probs=23.7

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHH----HhCC--CcEEEEEcC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVI----ENFG--VAVSERDVS  157 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL----~~~g--V~y~ErDVs  157 (289)
                      .-.|++|+-.      +||+|......|    +.++  |.|..+.+.
T Consensus        26 ~v~i~~f~d~------~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~   66 (193)
T 2rem_A           26 KIEVVEIFGY------TCPHCAHFDSKLQAWGARQAKDVRFTLVPAV   66 (193)
T ss_dssp             CEEEEEEECT------TCHHHHHHHHHHHHHHHTSCTTEEEEEEECC
T ss_pred             CeEEEEEECC------CChhHhhhhHHHHHHHHhcCCceEEEEeCcc
Confidence            3368888888      999998765544    4454  556666664

>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}

Probab=92.76  E-value=0.64  Score=35.91  Aligned_cols=35  Identities=9%  Similarity=0.056  Sum_probs=23.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh----------CCCcEEEEEcCCCh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN----------FGVAVSERDVSMDR  160 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~----------~gV~y~ErDVs~d~  160 (289)
                      |+.|..+      +|+.|.+....|..          .++.+--++++.+.
T Consensus        35 ll~F~a~------wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~   79 (142)
T 3eur_A           35 LLFINNP------GCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEEL   79 (142)
T ss_dssp             EEEECCS------SSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCH
T ss_pred             EEEEECC------CCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCH
Confidence            4445556      99999876555544          56777777776553

>1n2a_A Glutathione S-transferase; HET: GTS; 1.90A {Escherichia coli} SCOP: a.45.1.1 c.47.1.5 PDB: 1a0f_A*

Probab=92.57  E-value=0.077  Score=43.75  Aligned_cols=70  Identities=7%  Similarity=0.152  Sum_probs=47.0

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh---HHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG---FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~---~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .||...      .++ |.+++.+|+..||+|+.+.|+....   ..+++.++..                    .   ..
T Consensus         2 ~Ly~~~------~s~-~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP--------------------~---g~   51 (201)
T 1n2a_A            2 KLFYKP------GAC-SLASHITLRESGKDFTLVSVDLMKKRLENGDDYFAVNP--------------------K---GQ   51 (201)
T ss_dssp             EEEECT------TST-THHHHHHHHHTTCCCEEEEEETTTTEETTCCBGGGTCT--------------------T---CC
T ss_pred             eeecCC------Ccc-hHHHHHHHHHcCCCCeeEEEeCCCccccCCHHHHhhCc--------------------C---CC
Confidence            578776      664 8999999999999999888765321   1122222211                    1   23


Q ss_pred             CCEEEE-CCeEEechHHHHHHHHh
Q 041824          198 LPRVFV-KGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       198 LPqIFI-~G~~IGG~del~~L~E~  220 (289)
                      +|.+.+ ||..|.....+.+..++
T Consensus        52 vP~L~~~~g~~l~eS~aI~~yL~~   75 (201)
T 1n2a_A           52 VPALLLDDGTLLTEGVAIMQYLAD   75 (201)
T ss_dssp             SCEEECTTSCEEESHHHHHHHHHH
T ss_pred             CCeEEecCCcEEecHHHHHHHHHH
Confidence            499986 78888888887776543

>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A

Probab=92.54  E-value=0.42  Score=39.32  Aligned_cols=36  Identities=11%  Similarity=0.122  Sum_probs=23.9

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHH----HHHHHHHhCCCc--EEEEEcC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACK----AAKSVIENFGVA--VSERDVS  157 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~----~ak~iL~~~gV~--y~ErDVs  157 (289)
                      +...|++|+-.      +|++|.    .+.++++.++..  |..+.+.
T Consensus        22 ~~~~i~~f~d~------~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~   63 (195)
T 2znm_A           22 GKIEVLEFFGY------FCVHCHHFDPLLLKLGKALPSDAYLRTEHVV   63 (195)
T ss_dssp             SSEEEEEEECT------TSCCTTSSCHHHHHHHHHSCTTEEEEEEECC
T ss_pred             CCcEEEEEECC------CChhHHHHhHHHHHHHHHCCCceEEEEeccc
Confidence            44467888888      999996    456666677555  4445543

>2pvq_A Glutathione S-transferase; xenobiotics detoxification, H-site; HET: GSH; 1.80A {Ochrobactrum anthropi} PDB: 2nto_A*

Probab=92.53  E-value=0.089  Score=43.38  Aligned_cols=70  Identities=10%  Similarity=0.155  Sum_probs=48.1

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh---HHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG---FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~---~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .+|+..      .++ |.+++.+|+..||+|+.+.|+....   ...++.++..                    .   ..
T Consensus         2 ~Ly~~~------~s~-~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~~P--------------------~---g~   51 (201)
T 2pvq_A            2 KLYYKV------GAA-SLAPHIILSEAGLPYELEAVDLKAKKTADGGDYFAVNP--------------------R---GA   51 (201)
T ss_dssp             EEEECT------TST-THHHHHHHHHHTCCCEEEECBTTTTBCTTSCBGGGTCT--------------------T---CC
T ss_pred             eeeeCC------Ccc-HHHHHHHHHhcCCCceEEEecccccCCCCCHHHHhhCc--------------------C---CC
Confidence            578877      665 9999999999999999998875321   0112222111                    1   23


Q ss_pred             CCEEE-ECCeEEechHHHHHHHHh
Q 041824          198 LPRVF-VKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       198 LPqIF-I~G~~IGG~del~~L~E~  220 (289)
                      +|.+. -||..|.....+.+..++
T Consensus        52 vP~L~~~~g~~l~eS~aI~~yL~~   75 (201)
T 2pvq_A           52 VPALEVKPGTVITQNAAILQYIGD   75 (201)
T ss_dssp             SCEEEEETTEEEESHHHHHHHHHH
T ss_pred             CCEEEeCCCCEEehHHHHHHHHHH
Confidence            49998 588899888888776543

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=92.34  E-value=0.09  Score=38.68  Aligned_cols=38  Identities=26%  Similarity=0.628  Sum_probs=30.6

Q ss_pred             CcccCCCCceeE-----------eCCCCCCcceeeeccCCCCccccccCCccCcCCccc
Q 041824          237 GVCQGCADVRFF-----------PCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVL  284 (289)
Q Consensus       237 ~~C~~Cgg~rfv-----------pC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLvr  284 (289)
                      ..|..|.|.+.+           +|+.|+|+-++.          ..+|+.|+-.|.++
T Consensus        29 ~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~----------~~~C~~C~G~G~~~   77 (79)
T 1exk_A           29 QTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI----------KDPCNKCHGHGRVE   77 (79)
T ss_dssp             EECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC----------SSBCGGGTTSSEEE
T ss_pred             CCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEEC----------CCcCCCCCCeEEEe
Confidence            479999988754           899999997763          23899999998774

>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0

Probab=92.23  E-value=0.35  Score=37.00  Aligned_cols=37  Identities=14%  Similarity=0.076  Sum_probs=28.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC-----------CCcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF-----------GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----------gV~y~ErDVs~d~~  161 (289)
                      -+|.|+++      +|++|++....|+..           +|.+-.+|++.+++
T Consensus        36 vlv~F~a~------wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~   83 (127)
T 3h79_A           36 VFVLYYVP------WSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPD   83 (127)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHH
T ss_pred             EEEEEECC------ccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHh
Confidence            46666777      999999999888763           36788888887643

>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}

Probab=92.23  E-value=0.62  Score=35.71  Aligned_cols=37  Identities=14%  Similarity=0.174  Sum_probs=24.8

Q ss_pred             EEEEEecCCCCCCCCHHHHHH----------HHHHHhCCCcEEEEEcCCChhH
Q 041824          120 VVIYTTTLRGIRKTYEACKAA----------KSVIENFGVAVSERDVSMDRGF  162 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~a----------k~iL~~~gV~y~ErDVs~d~~~  162 (289)
                      ||.|..+      +|+.|.+.          .+.+...++.+--++++.+.+.
T Consensus        31 ll~F~a~------~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~   77 (142)
T 3ewl_A           31 MLFFYDP------DCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREE   77 (142)
T ss_dssp             EEEECCS------SCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHH
T ss_pred             EEEEECC------CCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHH
Confidence            4445556      99999985          3344456788888888765443

>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=92.08  E-value=0.52  Score=35.77  Aligned_cols=38  Identities=11%  Similarity=0.122  Sum_probs=27.5

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh----CC--CcEEEEEcCCChh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN----FG--VAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~g--V~y~ErDVs~d~~  161 (289)
                      .-||.|+++      +|++|+++...|+.    ++  +.|..+|++.+.+
T Consensus        37 ~~lv~f~a~------wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   80 (130)
T 2dml_A           37 LWLVEFYAP------WCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQS   80 (130)
T ss_dssp             CEEEEEECT------TCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHH
T ss_pred             eEEEEEECC------CCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHH
Confidence            346666666      99999988777654    32  7788899887653

>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A

Probab=91.97  E-value=0.38  Score=38.48  Aligned_cols=36  Identities=11%  Similarity=0.102  Sum_probs=26.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      ||.|+.+      +|+.|++....|+.    +  .+.|..+|++.+++
T Consensus        27 lv~F~a~------wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~   68 (142)
T 1qgv_A           27 VIRFGHD------WDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPD   68 (142)
T ss_dssp             EEEEECT------TSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT
T ss_pred             EEEEECC------CCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHH
Confidence            4556666      99999998887764    2  47788888886643

>1pmt_A PMGST, GST B1-1, glutathione transferase; glutathione-conjugating, A putative oxidoreduct; HET: GSH; 2.50A {Proteus mirabilis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pmt_A*

Probab=91.83  E-value=0.099  Score=43.16  Aligned_cols=70  Identities=10%  Similarity=0.163  Sum_probs=47.3

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh--H-HHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG--F-KEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~--~-reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .+|+..      .++ |.+++.+|+..||+|+.+.|+....  . ..++.++..                    .   ..
T Consensus         2 ~Ly~~~------~s~-~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP--------------------~---g~   51 (203)
T 1pmt_A            2 KLYYTP------GSC-SLSPHIVLRETGLDFSIERIDLRTKKTESGKDFLAINP--------------------K---GQ   51 (203)
T ss_dssp             EEEECT------TST-THHHHHHHHHTTCCCEEEEEETTTTEETTSCBGGGTCT--------------------T---CC
T ss_pred             eeeccC------Ccc-hHHHHHHHHHcCCCceEEEeccccccccCCHHHHhcCC--------------------C---CC
Confidence            578777      564 8999999999999999888765321  0 112222111                    1   23


Q ss_pred             CCEEE-ECCeEEechHHHHHHHHh
Q 041824          198 LPRVF-VKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       198 LPqIF-I~G~~IGG~del~~L~E~  220 (289)
                      +|.+. .||..|.....+.+..++
T Consensus        52 vP~L~~~~g~~l~eS~aI~~yL~~   75 (203)
T 1pmt_A           52 VPVLQLDNGDILTEGVAIVQYLAD   75 (203)
T ss_dssp             SCEEECTTSCEEESHHHHHHHHHT
T ss_pred             CCeEEecCCcEEeeHHHHHHHHHH
Confidence            49998 578889888888776654

>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A

Probab=91.51  E-value=0.54  Score=39.32  Aligned_cols=36  Identities=11%  Similarity=0.099  Sum_probs=28.6

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh----------CCCcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN----------FGVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~----------~gV~y~ErDVs~d~~  161 (289)
                      ||.|+++      +|++|+++...|+.          .+|.+..+|++.+++
T Consensus       138 ~v~F~a~------wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~  183 (226)
T 1a8l_A          138 ILVFVTP------TCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPE  183 (226)
T ss_dssp             EEEEECS------SCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHH
T ss_pred             EEEEeCC------CCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHH
Confidence            6778888      99999998888765          268888999986643

>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}

Probab=91.49  E-value=1.3  Score=34.49  Aligned_cols=35  Identities=9%  Similarity=0.118  Sum_probs=23.1

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh-------CCCcEEEEEcCCCh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN-------FGVAVSERDVSMDR  160 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~-------~gV~y~ErDVs~d~  160 (289)
                      ||.|..+      +|+.|.+....|+.       .++.+..++++.+.
T Consensus        33 ll~F~a~------~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~   74 (152)
T 2lrn_A           33 LVDFWFA------GCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRRE   74 (152)
T ss_dssp             EEEEECT------TCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCH
T ss_pred             EEEEECC------CChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCH
Confidence            5556666      99999986655543       34667777776543

>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=91.46  E-value=0.074  Score=40.83  Aligned_cols=34  Identities=9%  Similarity=0.336  Sum_probs=24.6

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC--------CCcEEEEEcCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF--------GVAVSERDVSMD  159 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~--------gV~y~ErDVs~d  159 (289)
                      ||.|+++      +|++|+++...|+..        .|.|..+|++.+
T Consensus        29 lv~f~a~------wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~   70 (133)
T 2dj3_A           29 LIEFYAP------WCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAN   70 (133)
T ss_dssp             EEEECCT------TCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTS
T ss_pred             EEEEECC------CChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcC
Confidence            5555566      999999998888752        466777777654

>2dsa_A Glutathione S-transferase; HET: GSH HPX; 2.10A {Burkholderia xenovorans} PDB: 2gdr_A*

Probab=91.41  E-value=0.1  Score=43.10  Aligned_cols=69  Identities=12%  Similarity=0.172  Sum_probs=45.9

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh---HHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG---FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~---~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .+|+..      .++ |.+++.+|+..||+|+.+.|+....   ..+++.++..                    .   ..
T Consensus         2 ~Ly~~~------~s~-~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~~P--------------------~---g~   51 (203)
T 2dsa_A            2 KLYYSP------GAC-SLSPHIALREAGLNFELVQVDLASKKTASGQDYLEVNP--------------------A---GY   51 (203)
T ss_dssp             EEEECT------TST-THHHHHHHHHHTCCCEEEEEETTTTEETTCCBGGGTCT--------------------T---CC
T ss_pred             eeeecC------Ccc-hHHHHHHHHHcCCCCeEEEEeCCCCcccCCHHHHHhCC--------------------C---CC
Confidence            578776      554 8999999999999999888875321   1112222111                    1   23


Q ss_pred             CCEEEE-CCeEEechHHHHHHHH
Q 041824          198 LPRVFV-KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI-~G~~IGG~del~~L~E  219 (289)
                      +|.+.+ ||..|.....+.+..+
T Consensus        52 vP~L~~~~g~~l~eS~aI~~yL~   74 (203)
T 2dsa_A           52 VPCLQLDDGRTLTEGPAIVQYVA   74 (203)
T ss_dssp             SCEEECTTSCEEESHHHHHHHHH
T ss_pred             CCEEEecCCcEEecHHHHHHHHH
Confidence            499986 7788888887777544

>4gf0_A Glutathione S-transferase; GST, enzyme function initiative, EFI, structural genomics; HET: GSH; 1.75A {Sulfitobacter}

Probab=91.37  E-value=0.61  Score=38.88  Aligned_cols=71  Identities=14%  Similarity=0.142  Sum_probs=47.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC--hhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD--RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d--~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      -+.+|+..      . +.+.+|+-+|+..||+|+.+.|+..  .....++.++...                    ..+ 
T Consensus         3 m~kLY~~p------~-s~s~~vr~~L~e~gl~ye~~~v~~~~~~~~~~~~l~~nP~--------------------g~v-   54 (215)
T 4gf0_A            3 MLTLYFTP------G-TISVAVAIAIEEAALPYQPVRVDFATAEQTKPDYLAINPK--------------------GRV-   54 (215)
T ss_dssp             SEEEEECT------T-STHHHHHHHHHHTTCCEEEEECCGGGTGGGSHHHHTTCTT--------------------CCS-
T ss_pred             cEEEEeCC------C-CcHHHHHHHHHHhCCCCEEEEECCCCCccCCHHHHHhCCC--------------------CCc-
Confidence            36789765      2 3578999999999999999888643  2223444432111                    134 


Q ss_pred             CCCEEEEC-CeEEechHHHHHHHH
Q 041824          197 VLPRVFVK-GRYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~-G~~IGG~del~~L~E  219 (289)
                        |.+.++ |..|.....+.+..+
T Consensus        55 --P~L~~d~g~~l~ES~aI~~YL~   76 (215)
T 4gf0_A           55 --PALRLEDDTILTETGALLDYVA   76 (215)
T ss_dssp             --CEEECTTSCEEECHHHHHHHHH
T ss_pred             --ceEEecCCcEEechHHHHHHHH
Confidence              999886 778877777766543

>3ppu_A Glutathione-S-transferase; GST fold; HET: GSH; 2.30A {Phanerochaete chrysosporium}

Probab=91.25  E-value=0.96  Score=42.47  Aligned_cols=31  Identities=10%  Similarity=0.078  Sum_probs=28.0

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCc
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVA  150 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~  150 (289)
                      |...++..||...      .||+|++|+-+|..+|+.
T Consensus        72 ~~e~gry~Ly~s~------~CP~a~Rv~i~l~lKGL~  102 (352)
T 3ppu_A           72 TPEKGRYHLYVSY------ACPWATRTLIVRKLKGLE  102 (352)
T ss_dssp             CCCTTSEEEEECS------SCHHHHHHHHHHHHTTCT
T ss_pred             CCCCCcEEEEEeC------CCchHHHHHHHHHHcCCC
Confidence            4457789999999      999999999999999986

>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A

Probab=91.10  E-value=0.57  Score=37.74  Aligned_cols=36  Identities=14%  Similarity=0.173  Sum_probs=26.6

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC-----C-CcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF-----G-VAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~-----g-V~y~ErDVs~d~~  161 (289)
                      ||.|.++      +|+.|++....|+..     + +.+..+|++.+++
T Consensus        27 lv~F~a~------WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~   68 (149)
T 3gix_A           27 VLRFGRD------EDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAV   68 (149)
T ss_dssp             EEEEECT------TSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCH
T ss_pred             EEEEECC------CCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHH
Confidence            4456666      999999998888753     2 6677888876654

>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}

Probab=90.42  E-value=0.041  Score=42.24  Aligned_cols=19  Identities=11%  Similarity=0.433  Sum_probs=14.8

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVI  144 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL  144 (289)
                      ||.|+++      +|++|++....|
T Consensus        23 lv~f~a~------wC~~C~~~~~~~   41 (130)
T 2lst_A           23 MVYFHSE------HCPYCQQMNTFV   41 (130)
Confidence            5556667      999999987666

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.03  E-value=0.17  Score=39.50  Aligned_cols=38  Identities=24%  Similarity=0.576  Sum_probs=30.5

Q ss_pred             CcccCCCCceeE-----------eCCCCCCcceeeeccCCCCccccccCCccCcCCccc
Q 041824          237 GVCQGCADVRFF-----------PCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVL  284 (289)
Q Consensus       237 ~~C~~Cgg~rfv-----------pC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLvr  284 (289)
                      ..|..|+|.+.+           +|+.|+|+-+++          ..+|+.|+-.|.++
T Consensus        46 ~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i----------~~~C~~C~G~G~v~   94 (104)
T 2ctt_A           46 QHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII----------ISPCVVCRGAGQAK   94 (104)
T ss_dssp             EECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC----------SSCCSSSSSCSEEC
T ss_pred             ccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC----------CCcCCCCCCeeEEE
Confidence            579999998753           899999987764          24799999988775

>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10

Probab=90.86  E-value=1.4  Score=33.71  Aligned_cols=35  Identities=9%  Similarity=0.184  Sum_probs=23.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh--------CCCcEEEEEcCCCh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN--------FGVAVSERDVSMDR  160 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~--------~gV~y~ErDVs~d~  160 (289)
                      ||.|..+      +|+.|++....|..        .++.+..++++.+.
T Consensus        32 ll~F~a~------wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~   74 (144)
T 1o73_A           32 FLYFSAS------WCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENE   74 (144)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSH
T ss_pred             EEEEECc------CCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCH
Confidence            4455566      99999987766654        25666777776543

>1f2e_A Glutathione S-transferase; GST complexed with glutathione, thioredoxin superfamily fold transferase; HET: GSH; 2.30A {Sphingomonas paucimobilis} SCOP: a.45.1.1 c.47.1.5

Probab=90.83  E-value=0.17  Score=41.61  Aligned_cols=70  Identities=10%  Similarity=0.140  Sum_probs=47.0

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh-H--HHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG-F--KEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~-~--reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .||+..      . ++|.+|+.+|+..||+|+.+.|+.... .  .+++.++...                    ..+  
T Consensus         2 ~Ly~~~------~-~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~~P~--------------------g~v--   52 (201)
T 1f2e_A            2 KLFISP------G-ACSLAPHIALRETGADFEAVKVDLAVRKTEAGEDFLTVNPS--------------------GKV--   52 (201)
T ss_dssp             EEEECT------T-STTHHHHHHHHHHTCCCEEEEEETTTTEETTSCBHHHHCTT--------------------CCS--
T ss_pred             eeeecC------C-ccHHHHHHHHHHcCCCceEEEeecCCCCCCCChHHHccCcC--------------------CCC--
Confidence            577754      2 568999999999999999887764321 1  1334443221                    134  


Q ss_pred             CCEEE-ECCeEEechHHHHHHHHh
Q 041824          198 LPRVF-VKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       198 LPqIF-I~G~~IGG~del~~L~E~  220 (289)
                       |.+. .||..|.....+.+..++
T Consensus        53 -P~L~~~~g~~l~eS~aI~~yL~~   75 (201)
T 1f2e_A           53 -PALTLDSGETLTENPAILLYIAD   75 (201)
T ss_dssp             -CEEECTTSCEEESHHHHHHHHHH
T ss_pred             -ceEEecCCcEeeHHHHHHHHHHH
Confidence             9998 478888888887775543

>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}

Probab=90.42  E-value=0.52  Score=36.46  Aligned_cols=36  Identities=8%  Similarity=0.192  Sum_probs=22.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHH----HhC---CCcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVI----ENF---GVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL----~~~---gV~y~ErDVs~d~~  161 (289)
                      ||.|..+      +|+.|.+....|    +.+   ++.+..++++.+.+
T Consensus        34 lv~f~~~------~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~   76 (152)
T 2lja_A           34 YIDVWAT------WCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKK   76 (152)
T ss_dssp             EEEECCS------SCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHH
T ss_pred             EEEEECC------cCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHH
Confidence            4455555      999998655444    333   46677777776553

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=90.26  E-value=1.1  Score=37.58  Aligned_cols=37  Identities=11%  Similarity=0.131  Sum_probs=27.7

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCCh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDR  160 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~  160 (289)
                      .-||.|+++      +|+.|+++...|+.    +  .|.|-.+|++.++
T Consensus       116 ~vlv~F~a~------wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~  158 (210)
T 3apq_A          116 LWFVNFYSP------GCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDR  158 (210)
T ss_dssp             CEEEEEECT------TCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCH
T ss_pred             cEEEEEeCC------CChhHHHHHHHHHHHHHHhcCceEEEEEECCccH
Confidence            346666777      99999998887764    2  3778888988765

>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}

Probab=89.96  E-value=0.54  Score=40.05  Aligned_cols=37  Identities=14%  Similarity=0.382  Sum_probs=27.0

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----CC--CcEEEEEcCCChh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----FG--VAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~g--V~y~ErDVs~d~~  161 (289)
                      -||.|+++      +|+.|++....|+.    ++  +.|..+|++.+++
T Consensus        33 vvv~F~a~------wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~   75 (222)
T 3dxb_A           33 ILVDFWAE------WCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG   75 (222)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTT
T ss_pred             EEEEEECC------cCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHH
Confidence            35556666      99999998877764    33  7788889887654

>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.67  E-value=0.23  Score=38.65  Aligned_cols=36  Identities=14%  Similarity=0.337  Sum_probs=27.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh----C---CCcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN----F---GVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~----~---gV~y~ErDVs~d~~  161 (289)
                      ||.|+++      +|+.|+++...|+.    +   ++.|..+|++.+++
T Consensus        30 lv~f~a~------wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~   72 (137)
T 2dj0_A           30 IVEFFAN------WSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTD   72 (137)
T ss_dssp             EEEECCT------TCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHH
T ss_pred             EEEEECC------CCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHH
Confidence            6666666      99999988877764    2   57888888877654

>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A

Probab=89.61  E-value=3.2  Score=32.75  Aligned_cols=43  Identities=16%  Similarity=0.166  Sum_probs=29.2

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh---CCCcEEEEEcCCChhHHHHHHH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN---FGVAVSERDVSMDRGFKEELRE  168 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~---~gV~y~ErDVs~d~~~reEL~~  168 (289)
                      ||.|..+      +|++|.+....|+.   .++.+..++++.+++...++.+
T Consensus        55 ll~F~a~------~C~~C~~~~~~l~~l~~~~v~vv~v~~~~~~~~~~~~~~  100 (168)
T 2b1k_A           55 LLNVWAT------WCPTCRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLK  100 (168)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHTTCCEEEEEESCCHHHHHHHHH
T ss_pred             EEEEECC------CCHHHHHHHHHHHHHHHCCCEEEEEECCCChHHHHHHHH
Confidence            5555666      99999987666543   3899999998776544333333

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=89.53  E-value=0.21  Score=44.88  Aligned_cols=52  Identities=23%  Similarity=0.475  Sum_probs=31.2

Q ss_pred             CcccCCCCce-----eEeCCCCCCcceeeeccCCCCc--cccccCCccCcCC-----cccCCCC
Q 041824          237 GVCQGCADVR-----FFPCFRCNGSCKLVINMQPRGK--TAALRCPDCNENG-----LVLCPLC  288 (289)
Q Consensus       237 ~~C~~Cgg~r-----fvpC~~C~GS~K~~~~~~~~g~--~~~~rC~~CNENG-----LvrCp~C  288 (289)
                      ..|..|.|.+     ...|..|+|+-.++.....+..  .....|+.|+-.|     -..|+.|
T Consensus        39 ~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~~~C~~C  102 (248)
T 1nlt_A           39 ILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSC  102 (248)
T ss_dssp             EECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTTSBCSSS
T ss_pred             EeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEeccCCCCccc
Confidence            4677777665     3678888888655433211110  1245788888777     4457777

>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A

Probab=89.30  E-value=0.82  Score=37.04  Aligned_cols=59  Identities=15%  Similarity=0.200  Sum_probs=38.8

Q ss_pred             HHHHHHHhCCCcEEEEEcCCChhHHH---HHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEEEECCeEE--ech--
Q 041824          139 AAKSVIENFGVAVSERDVSMDRGFKE---ELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYV--GGA--  211 (289)
Q Consensus       139 ~ak~iL~~~gV~y~ErDVs~d~~~re---EL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI~G~~I--GG~--  211 (289)
                      .+..+|+.+||.++..++..++....   .+.+++...                    .+..||.++|||+.+  |-|  
T Consensus        31 ~~~~~lk~~Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~--------------------G~~~LP~~~VDGevv~~G~yPt   90 (110)
T 3kgk_A           31 TDVQWLKQSGVQIERFNLAQQPMSFVQNEKVKAFIEAS--------------------GAEGLPLLLLDGETVMAGRYPK   90 (110)
T ss_dssp             HHHHHHHHHTCCEEEEETTTCTTHHHHSHHHHHHHHHH--------------------CGGGCCEEEETTEEEEESSCCC
T ss_pred             HHHHHHHHCCCeEEEEccccChHHHhcCHHHHHHHHHc--------------------CcccCCEEEECCEEEEeccCCC
Confidence            56778899999999999998875322   233333221                    124569999999865  444  


Q ss_pred             -HHHHHH
Q 041824          212 -EEVLRI  217 (289)
Q Consensus       212 -del~~L  217 (289)
                       +|+.++
T Consensus        91 ~eEl~~~   97 (110)
T 3kgk_A           91 RAELARW   97 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence             554443

>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}

Probab=89.29  E-value=0.56  Score=40.19  Aligned_cols=37  Identities=8%  Similarity=0.130  Sum_probs=28.4

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChhH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRGF  162 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~~  162 (289)
                      ||-|+.+      ||+.|+.+.-+|++    +  .+.|..+||+..+++
T Consensus        45 VVdF~A~------WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~   87 (160)
T 2av4_A           45 CIRFGHD------YDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDF   87 (160)
T ss_dssp             EEEEECT------TSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTT
T ss_pred             EEEEECC------CChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHH
Confidence            4446666      99999999888864    3  378899999977653

>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A

Probab=88.99  E-value=1.3  Score=33.61  Aligned_cols=34  Identities=12%  Similarity=0.312  Sum_probs=23.4

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----CC--CcEEEEEcCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----FG--VAVSERDVSM  158 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~g--V~y~ErDVs~  158 (289)
                      -||.|..+      +|++|.+....|+.    ++  +.+..++++.
T Consensus        32 ~lv~f~~~------~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~   71 (148)
T 2b5x_A           32 TLIHFWSI------SCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPR   71 (148)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHHTTTSEEEEEECCC
T ss_pred             EEEEEEcC------CCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCC
Confidence            35566666      99999987666653    22  7777777764

>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A

Probab=88.98  E-value=1.8  Score=33.50  Aligned_cols=35  Identities=3%  Similarity=-0.017  Sum_probs=23.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh--------CCCcEEEEEcCCCh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN--------FGVAVSERDVSMDR  160 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~--------~gV~y~ErDVs~d~  160 (289)
                      ||.|..+      +|+.|++....|+.        .++.+..++++.+.
T Consensus        32 ll~F~a~------wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~   74 (146)
T 1o8x_A           32 FFYFSAS------WCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEE   74 (146)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSH
T ss_pred             EEEEEcc------CCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCH
Confidence            4445555      99999977666543        25667777776543

>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}

Probab=88.77  E-value=0.042  Score=41.85  Aligned_cols=38  Identities=18%  Similarity=0.334  Sum_probs=28.0

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C-CCcEEEEEcCCChhH
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F-GVAVSERDVSMDRGF  162 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~-gV~y~ErDVs~d~~~  162 (289)
                      -||.|+++      +|++|+++...|+.    + +|.|..+|++.+.++
T Consensus        39 ~vv~f~~~------~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~   81 (130)
T 1wmj_A           39 VIIDFTAS------WCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEV   81 (130)
T ss_dssp             CBEECCSS------SCSCSSSSHHHHHHHHHHCTTBCCEECCTTTSGGG
T ss_pred             EEEEEECC------CChhHHHHHHHHHHHHHHCCCCEEEEEeccchHHH
Confidence            46666666      99999987776664    3 688888888876543

>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}

Probab=88.50  E-value=1.3  Score=34.13  Aligned_cols=34  Identities=12%  Similarity=0.149  Sum_probs=21.3

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh-------CCCcEEEEEcCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN-------FGVAVSERDVSMD  159 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~-------~gV~y~ErDVs~d  159 (289)
                      ||.|..+      +|++|.+....|+.       .++.+..++++.+
T Consensus        32 lv~f~~~------~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~   72 (153)
T 2l5o_A           32 LINFWFP------SCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPID   72 (153)
T ss_dssp             EEEEECT------TCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTS
T ss_pred             EEEEECC------CCccHHHHHHHHHHHHHHhccCCeEEEEEecCCC
Confidence            5555666      99999876655543       2466666665433

>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}

Probab=88.40  E-value=2.8  Score=32.36  Aligned_cols=32  Identities=19%  Similarity=0.256  Sum_probs=23.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh----CCCcEEEEEcC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN----FGVAVSERDVS  157 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~----~gV~y~ErDVs  157 (289)
                      ||.|..+      +|+.|.+....|..    +++.+..++++
T Consensus        34 ll~f~~~------~C~~C~~~~~~l~~l~~~~~v~~v~v~~d   69 (154)
T 3ia1_A           34 VIVFWAS------WCTVCKAEFPGLHRVAEETGVPFYVISRE   69 (154)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHHHCCCEEEEECC
T ss_pred             EEEEEcc------cChhHHHHHHHHHHHHHHcCCeEEEEeCC
Confidence            5556666      99999987666654    38888888884

>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17

Probab=88.20  E-value=2.3  Score=34.48  Aligned_cols=76  Identities=18%  Similarity=0.312  Sum_probs=46.4

Q ss_pred             CCcEEEEEecCCCCCCCCHHH------HHHHHHHHh--------CCCcEEEEEcCCChh----HHHHHHHHHcccccccC
Q 041824          117 ENKVVIYTTTLRGIRKTYEAC------KAAKSVIEN--------FGVAVSERDVSMDRG----FKEELRELMMRRRRRSS  178 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C------~~ak~iL~~--------~gV~y~ErDVs~d~~----~reEL~~llg~~~~~~~  178 (289)
                      +-.|+||...     ..|.-|      +....+|+.        ..+.|.++||...++    ..+++.++.-..     
T Consensus         7 ~v~i~VYGAe-----~iCASCVnaPSSkeTyEWLqAal~RKyp~~~f~~~YIDI~~~~~~l~d~~~~~ae~I~ed-----   76 (111)
T 1xg8_A            7 SNAVVVYGAD-----VICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQD-----   76 (111)
T ss_dssp             CEEEEEEECS-----SCCGGGSSSCCHHHHHHHHHHHHHHHCTTSCEEEEEEETTTC---CCHHHHHHHHHHHTT-----
T ss_pred             EEEEEEEccc-----ccchhccCCCCchhHHHHHHHHHhCcCCCCceEEEEEeccCCccchhHHHHHHHHHHhhc-----
Confidence            3468999987     356666      455555552        345678999976533    244555554332     


Q ss_pred             CCCCcchhhccCCCCCCCCCCEEEECCeEEe-chHHHHHHH
Q 041824          179 SSNNNEEEAESSVQPLPPVLPRVFVKGRYVG-GAEEVLRIV  218 (289)
Q Consensus       179 ~s~~~~~~g~~t~~~tv~~LPqIFI~G~~IG-G~del~~L~  218 (289)
                                   .   .-.|.|.|+|++|| |.-.++...
T Consensus        77 -------------e---~FYPlV~indeiVaEGnp~LK~I~  101 (111)
T 1xg8_A           77 -------------E---LFYPLITMNDEYVADGYIQTKQIT  101 (111)
T ss_dssp             -------------S---SCSSEEEETTEEEEESSCCHHHHH
T ss_pred             -------------c---ccceEEEECCEEeecCCccHHHHH
Confidence                         1   12499999999998 555555443

>3h1n_A Probable glutathione S-transferase; APC84167, bordetella bronchisepti structural genomics, PSI-2, protein structure initiative; 1.83A {Bordetella bronchiseptica RB50}

Probab=88.03  E-value=0.61  Score=40.33  Aligned_cols=72  Identities=7%  Similarity=0.056  Sum_probs=51.0

Q ss_pred             cEEEEEecCCCCCCC-CHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHc--ccccccCCCCCcchhhccCCCCCC
Q 041824          119 KVVIYTTTLRGIRKT-YEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMM--RRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       119 kVVVYttSLrgvR~t-C~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg--~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      .+.||...      . .+.+.+|+-+|+..||+|+.+.|+.+....+   +.+.  ..         |          ..
T Consensus        21 ~~~L~y~~------g~~~~a~~vr~~L~~~gi~ye~~~v~~~~~~~~---~~~~~k~~---------n----------P~   72 (252)
T 3h1n_A           21 AYDLWYWD------GIPGRGEFVRLALEAGKIPYRDRAREPGEDMLD---DMRRRRDT---------P----------PF   72 (252)
T ss_dssp             CEEEECCS------SSCTTHHHHHHHHHHHTCCEEEGGGSTTCCHHH---HHTSCCSS---------C----------CS
T ss_pred             ceEEEeCC------CCCcchHHHHHHHHhCCCCceEEeecCchhhHH---HHhhccCC---------C----------CC
Confidence            47888876      3 5889999999999999999998884322222   2322  11         1          12


Q ss_pred             CCCCEEEECCeEEechHHHHHHHH
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                       .+|.+..||..|.....+.++..
T Consensus        73 -kVPvL~d~g~~l~ES~AI~~YL~   95 (252)
T 3h1n_A           73 -APPYLVADGMTIAQTANILLFLG   95 (252)
T ss_dssp             -SSCEEEETTEEEESHHHHHHHHH
T ss_pred             -CCCEEEECCEEeecHHHHHHHHH
Confidence             55999999999988877776554

>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}

Probab=87.73  E-value=0.95  Score=34.48  Aligned_cols=35  Identities=11%  Similarity=0.257  Sum_probs=22.7

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHH----hC----CCcEEEEEcCCCh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIE----NF----GVAVSERDVSMDR  160 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~----~~----gV~y~ErDVs~d~  160 (289)
                      ||.|..+      +|++|.+....|.    .+    ++.+..++++.+.
T Consensus        37 ll~F~~~------~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~   79 (148)
T 3fkf_A           37 LLNFWAS------WCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDR   79 (148)
T ss_dssp             EEEEECG------GGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCH
T ss_pred             EEEEECC------CCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCH
Confidence            5556666      9999987765554    33    3556666666554

>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}

Probab=87.66  E-value=1.2  Score=33.99  Aligned_cols=36  Identities=8%  Similarity=0.290  Sum_probs=24.2

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh-------CCCcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN-------FGVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~-------~gV~y~ErDVs~d~~  161 (289)
                      ||.|..+      +|++|.+....|..       .++.+..++++.+.+
T Consensus        35 ll~f~~~------~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~   77 (148)
T 3hcz_A           35 ILFFWDS------QCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDE   77 (148)
T ss_dssp             EEEEECG------GGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSH
T ss_pred             EEEEECC------CCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHH
Confidence            4556666      99999866555543       357777888876544

>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A

Probab=87.44  E-value=1.8  Score=33.29  Aligned_cols=35  Identities=6%  Similarity=-0.012  Sum_probs=22.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh--------CCCcEEEEEcCCCh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN--------FGVAVSERDVSMDR  160 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~--------~gV~y~ErDVs~d~  160 (289)
                      ||.|..+      +|+.|++....|+.        .++.+..++++.+.
T Consensus        32 ll~F~a~------wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~   74 (144)
T 1i5g_A           32 FFYFSAS------WCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESA   74 (144)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSH
T ss_pred             EEEEECC------CCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCH
Confidence            4445555      99999987766653        25666677776543

>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A

Probab=87.21  E-value=1.8  Score=36.10  Aligned_cols=36  Identities=14%  Similarity=0.207  Sum_probs=26.7

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC-------C--CcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF-------G--VAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~-------g--V~y~ErDVs~d~~  161 (289)
                      +|.|+.+      +|+.|++....|+..       +  |.+..+|++.+.+
T Consensus        36 ~v~F~a~------wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~   80 (241)
T 3idv_A           36 LLEFYAP------WCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASV   80 (241)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHH
T ss_pred             EEEEECC------CCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHH
Confidence            5556666      999999988766542       2  8889999987653

>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}

Probab=87.13  E-value=4.7  Score=30.97  Aligned_cols=34  Identities=9%  Similarity=0.127  Sum_probs=22.1

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh----C---CCcEEEEEcCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN----F---GVAVSERDVSMD  159 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~----~---gV~y~ErDVs~d  159 (289)
                      ||.|..+      +|+.|.+....|..    +   ++.+..++++.+
T Consensus        32 ll~f~~~------~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~   72 (154)
T 3kcm_A           32 IVNFWAT------WCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEG   72 (154)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTT
T ss_pred             EEEEECC------CCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCc
Confidence            4456666      99999986665543    3   455666666654

>3m1g_A Putative glutathione S-transferase; ECM4-like subfamily, GST_C family, structural genomics, PSI- protein structure initiative; 2.10A {Corynebacterium glutamicum}

Probab=86.96  E-value=0.7  Score=43.85  Aligned_cols=37  Identities=5%  Similarity=0.012  Sum_probs=30.6

Q ss_pred             CCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCc-EEEEEcC
Q 041824          115 DGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVA-VSERDVS  157 (289)
Q Consensus       115 ~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~-y~ErDVs  157 (289)
                      ...+++.||...      .|++|++|+-+|+.+||+ +..+|+.
T Consensus        57 ~e~gr~~LY~~~------~cP~a~Rv~I~L~lkGL~e~i~vdl~   94 (362)
T 3m1g_A           57 VEAGRYRLVAAR------ACPWAHRTVITRRLLGLENVISLGLT   94 (362)
T ss_dssp             CCTTSEEEEECT------TCHHHHHHHHHHHHHTCTTTSEEEEC
T ss_pred             CCCCeEEEEecC------CCccHHHHHHHHHHhCCCceEEEecc
Confidence            456789999999      999999999999999998 2245554

>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A

Probab=86.90  E-value=1.4  Score=36.81  Aligned_cols=34  Identities=15%  Similarity=0.202  Sum_probs=26.4

Q ss_pred             EEEEEecCCCCCC-CCHHHHHHHHHHHh-----CCCcEEEEEcCC
Q 041824          120 VVIYTTTLRGIRK-TYEACKAAKSVIEN-----FGVAVSERDVSM  158 (289)
Q Consensus       120 VVVYttSLrgvR~-tC~~C~~ak~iL~~-----~gV~y~ErDVs~  158 (289)
                      +++|..+     . +|++|++++.+|+.     -+|.|..+|++.
T Consensus        25 ~lv~f~~-----~~~C~~C~~~~~~~~~la~~~~~v~~~~vd~~~   64 (226)
T 1a8l_A           25 KLIVFVR-----KDHCQYCDQLKQLVQELSELTDKLSYEIVDFDT   64 (226)
T ss_dssp             EEEEEEC-----SSSCTTHHHHHHHHHHHHTTCTTEEEEEEETTS
T ss_pred             EEEEEec-----CCCCchhHHHHHHHHHHHhhCCceEEEEEeCCC
Confidence            3466665     2 79999999999987     457888999874

>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A

Probab=86.76  E-value=0.75  Score=34.32  Aligned_cols=37  Identities=16%  Similarity=0.311  Sum_probs=27.5

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhC-----------CCcEEEEEcCCCh
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENF-----------GVAVSERDVSMDR  160 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----------gV~y~ErDVs~d~  160 (289)
                      .-||.|+++      +|++|++....|+..           +|.|..+|++.++
T Consensus        27 ~vlv~f~a~------wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~   74 (121)
T 2djj_A           27 DVLIEFYAP------WCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND   74 (121)
T ss_dssp             CEEEEEECS------SCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC
T ss_pred             CEEEEEECC------CCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc
Confidence            346666666      999999988887652           5778888987653

>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*

Probab=86.67  E-value=1.1  Score=39.09  Aligned_cols=36  Identities=8%  Similarity=0.318  Sum_probs=26.9

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCCh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~  160 (289)
                      -||.|+.+      ||+.|+.....|+.    +  .|.|..+|++.++
T Consensus        29 v~v~f~a~------wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~   70 (287)
T 3qou_A           29 VLFYFWSE------RSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQ   70 (287)
T ss_dssp             EEEEEECT------TCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCH
T ss_pred             EEEEEECC------CChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCH
Confidence            35556666      99999987777764    2  3888999998765

>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}

Probab=86.30  E-value=4.2  Score=31.15  Aligned_cols=36  Identities=11%  Similarity=0.225  Sum_probs=24.4

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh-------CCCcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN-------FGVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~-------~gV~y~ErDVs~d~~  161 (289)
                      ||.|..+      +|++|......|..       .++.+..++++.+.+
T Consensus        32 ll~f~~~------~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~   74 (152)
T 3gl3_A           32 YLDFWAS------WCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTG   74 (152)
T ss_dssp             EEEEECT------TCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHH
T ss_pred             EEEEECC------cCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHH
Confidence            4456666      99999876655543       357777788776543

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=86.17  E-value=0.4  Score=43.03  Aligned_cols=40  Identities=23%  Similarity=0.538  Sum_probs=30.0

Q ss_pred             CcccCCCCcee---------------EeCCCCCCcceeeeccCCCCccccccCCccCcCCccc
Q 041824          237 GVCQGCADVRF---------------FPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVL  284 (289)
Q Consensus       237 ~~C~~Cgg~rf---------------vpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLvr  284 (289)
                      ..|..|+|.+.               .+|+.|+|+-+++..        ..+|+.|+-.|.++
T Consensus        55 ~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~--------~~~C~~C~G~g~~~  109 (248)
T 1nlt_A           55 KKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDP--------KDRCKSCNGKKVEN  109 (248)
T ss_dssp             CCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCT--------TSBCSSSTTSCEEE
T ss_pred             ccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEecc--------CCCCcccCCCceEe
Confidence            57999988764               379999999777533        24899998888753

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=85.26  E-value=0.43  Score=33.73  Aligned_cols=23  Identities=26%  Similarity=0.696  Sum_probs=13.1

Q ss_pred             cccCCCCcee---EeCCCCCCcceee
Q 041824          238 VCQGCADVRF---FPCFRCNGSCKLV  260 (289)
Q Consensus       238 ~C~~Cgg~rf---vpC~~C~GS~K~~  260 (289)
                      .|..|+|.+.   -+|..|+|+.++.
T Consensus        11 ~C~~C~GsG~~i~~~C~~C~G~G~v~   36 (53)
T 3lcz_A           11 TCPNCNGSGREEPEPCPKCLGKGVIL   36 (53)
T ss_dssp             ECTTTTTSCEETTEECTTTTTSSEEE
T ss_pred             cCcCCcccccCCCCcCCCCCCcEEEE
Confidence            4666665555   4566666665443

>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}

Probab=85.08  E-value=3.6  Score=33.09  Aligned_cols=35  Identities=3%  Similarity=0.115  Sum_probs=22.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh--------CCCcEEEEEcCCCh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN--------FGVAVSERDVSMDR  160 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~--------~gV~y~ErDVs~d~  160 (289)
                      ||.|..+      +|+.|++....|+.        .++.+..++++.+.
T Consensus        52 ll~F~a~------wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~   94 (165)
T 3s9f_A           52 FFYFSAS------WCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEE   94 (165)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSH
T ss_pred             EEEEECC------cChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCH
Confidence            4445566      99999977666543        25666677776553

>1b8x_A Protein (AML-1B); nuclear matrix targeting signal protein, signal protein; 2.70A {Escherichia coli} SCOP: a.45.1.1 c.47.1.5

Probab=85.08  E-value=0.28  Score=43.91  Aligned_cols=74  Identities=12%  Similarity=0.088  Sum_probs=47.3

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      ++||.-.      .+++|.+++.+|+.+||+|+.+.|+.... .+++.... ..         |..      .   ..+|
T Consensus         2 ~~Lyy~~------~s~~~~~vr~~L~e~gi~ye~~~v~~~~~-~~~~~~~~-~l---------n~P------~---gkVP   55 (280)
T 1b8x_A            2 PILGYWK------IKGLVQPTRLLLEYLEEKYEEHLYERDEG-DKWRNKKF-EL---------GLE------F---PNLP   55 (280)
T ss_dssp             CCCEEES------SSTTTHHHHHHHHHTTCCCCCEEECSSTT-TTTTSSTT-TT---------CCS------S---CCSS
T ss_pred             cEEEEeC------CCchHHHHHHHHHHcCCCcEEEEeCCCCh-hhhhhhhh-cc---------CCC------C---CCCC
Confidence            4567777      78999999999999999999888874200 00111000 00         000      1   1349


Q ss_pred             EEEECCeEEechHHHHHHHH
Q 041824          200 RVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       200 qIFI~G~~IGG~del~~L~E  219 (289)
                      .|..||..|.....+.+..+
T Consensus        56 vL~d~g~~l~ES~aI~~YL~   75 (280)
T 1b8x_A           56 YYIDGDVKLTQSMAIIRYIA   75 (280)
T ss_dssp             BEECSSCEECSHHHHHHHHH
T ss_pred             EEEECCEEEEcHHHHHHHHH
Confidence            99888888888877776544

>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A

Probab=84.72  E-value=0.95  Score=37.83  Aligned_cols=33  Identities=3%  Similarity=0.125  Sum_probs=24.1

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVS  157 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs  157 (289)
                      .||.|+.+      +|++|++..-+|+..     +|.+..+|++
T Consensus        57 vvv~F~A~------WC~pC~~~~P~l~~l~~~~~~v~~~~v~~d   94 (167)
T 1z6n_A           57 RLLVAGEM------WCPDCQINLAALDFAQRLQPNIELAIISKG   94 (167)
T ss_dssp             EEEEECCT------TCHHHHHHHHHHHHHHHHCTTEEEEEECHH
T ss_pred             EEEEEECC------CChhHHHHHHHHHHHHHHCCCcEEEEEECC
Confidence            46677777      999999988887753     4556666654

>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}

Probab=84.08  E-value=2  Score=34.58  Aligned_cols=82  Identities=11%  Similarity=0.221  Sum_probs=50.3

Q ss_pred             CCCcEEEEEecCC---CCC-----CCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHH---HHHHHHcccccccCCCCCcc
Q 041824          116 GENKVVIYTTTLR---GIR-----KTYEACKAAKSVIENFGVAVSERDVSMDRGFKE---ELRELMMRRRRRSSSSNNNE  184 (289)
Q Consensus       116 ~~~kVVVYttSLr---gvR-----~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~re---EL~~llg~~~~~~~~s~~~~  184 (289)
                      .|++|.||--.|=   |+-     +.=-.=..+..+|+.+||.++..++..++....   .+.+++...           
T Consensus         3 ~M~~i~ifepamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~-----------   71 (106)
T 3ktb_A            3 AMKKIEIFDPAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNLRDEPQVYVSNKTVNDFLQKH-----------   71 (106)
T ss_dssp             CCCCEEEEECSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEETTTCTTHHHHSHHHHHHHHTT-----------
T ss_pred             CCceEEEechhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEccccChHHHhcCHHHHHHHHHc-----------
Confidence            3678888877531   111     001122356778899999999999999875322   334444322           


Q ss_pred             hhhccCCCCCCCCCCEEEECCeEE--ech---HHHHHH
Q 041824          185 EEAESSVQPLPPVLPRVFVKGRYV--GGA---EEVLRI  217 (289)
Q Consensus       185 ~~g~~t~~~tv~~LPqIFI~G~~I--GG~---del~~L  217 (289)
                               .+..||.++|||+.+  |-|   +|+.++
T Consensus        72 ---------G~~~LP~~~VDGevv~~G~yPt~eEl~~~  100 (106)
T 3ktb_A           72 ---------GADALPITLVDGEIAVSQTYPTTKQMSEW  100 (106)
T ss_dssp             ---------CGGGCSEEEETTEEEECSSCCCHHHHHHH
T ss_pred             ---------CcccCCEEEECCEEEEeccCCCHHHHHHH
Confidence                     234579999999876  444   554443

>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}

Probab=83.40  E-value=13  Score=29.73  Aligned_cols=43  Identities=12%  Similarity=0.174  Sum_probs=26.1

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHH-------HhCCC------cEEEEEcCC-ChhHHHHHHH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVI-------ENFGV------AVSERDVSM-DRGFKEELRE  168 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL-------~~~gV------~y~ErDVs~-d~~~reEL~~  168 (289)
                      ||.|..+      +|+.|......|       ...|+      .+.-++++. +++..+++.+
T Consensus        63 lv~F~a~------~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~  119 (183)
T 3lwa_A           63 ILNAWGQ------WCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVT  119 (183)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHH
T ss_pred             EEEEECC------cCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHH
Confidence            4445555      999998655444       34568      787888876 4444444433

>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=83.27  E-value=1.7  Score=33.99  Aligned_cols=35  Identities=17%  Similarity=0.161  Sum_probs=24.5

Q ss_pred             cEEE-EEecCCCCCCCCHHHHHHHHHHHh----C-CCcEEEEEcCCC
Q 041824          119 KVVI-YTTTLRGIRKTYEACKAAKSVIEN----F-GVAVSERDVSMD  159 (289)
Q Consensus       119 kVVV-YttSLrgvR~tC~~C~~ak~iL~~----~-gV~y~ErDVs~d  159 (289)
                      .|+| |+.+      +|+.|+++...|+.    + +|.|..+|++..
T Consensus        32 ~vvv~f~a~------wC~~C~~~~p~l~~la~~~~~v~~~~vd~~~~   72 (135)
T 2dbc_A           32 WVVIHLYRS------SVPMCLVVNQHLSVLARKFPETKFVKAIVNSC   72 (135)
T ss_dssp             EEEEEECCT------TCHHHHHHHHHHHHHHHHCSSEEEEEECCSSS
T ss_pred             EEEEEEECC------CChHHHHHHHHHHHHHHHCCCcEEEEEEhhcC
Confidence            3555 5555      99999999887764    2 466777777654

>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A

Probab=83.09  E-value=12  Score=30.26  Aligned_cols=45  Identities=13%  Similarity=0.115  Sum_probs=29.8

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh---CCCcEEEEEcCCChhHHHHHHHHH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN---FGVAVSERDVSMDRGFKEELRELM  170 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~---~gV~y~ErDVs~d~~~reEL~~ll  170 (289)
                      ||.|..+      +|+.|.+....|+.   .+|.+.-++++.+.+...++.+..
T Consensus        62 ll~F~a~------~C~~C~~~~~~l~~l~~~~v~vv~vs~~d~~~~~~~~~~~~  109 (176)
T 3kh7_A           62 LVNVWGT------WCPSCRVEHPELTRLAEQGVVIYGINYKDDNAAAIKWLNEL  109 (176)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHTTCEEEEEEESCCHHHHHHHHHHT
T ss_pred             EEEEECC------cCHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHc
Confidence            5555666      99999877655543   388888888876665444444443

>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6

Probab=82.98  E-value=1  Score=39.11  Aligned_cols=32  Identities=25%  Similarity=0.234  Sum_probs=25.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVS  157 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs  157 (289)
                      ||.|+.+      +|+.|+.+..+|+..     +|.|..+|++
T Consensus       124 vV~F~a~------wC~~C~~l~p~l~~la~~~~~v~f~~vd~~  160 (217)
T 2trc_P          124 VVNIYED------GVRGCDALNSSLECLAAEYPMVKFCKIRAS  160 (217)
T ss_dssp             EEEEECT------TSTTHHHHHHHHHHHHTTCTTSEEEEEEHH
T ss_pred             EEEEECC------CCccHHHHHHHHHHHHHHCCCeEEEEEECC
Confidence            4555556      999999999998862     5778888885

>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A

Probab=82.89  E-value=0.67  Score=38.35  Aligned_cols=33  Identities=15%  Similarity=0.043  Sum_probs=23.7

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC-------CCcEEEEEcCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF-------GVAVSERDVSM  158 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~-------gV~y~ErDVs~  158 (289)
                      +|.|+++      +|+.|+.....+...       ++.|..+||+.
T Consensus        48 lV~F~A~------WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~   87 (151)
T 3ph9_A           48 MVIHHLE------DCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMH   87 (151)
T ss_dssp             EEEECCT------TCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESS
T ss_pred             EEEEECC------CCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecC
Confidence            4455566      999999988877642       34688888874

>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A

Probab=82.51  E-value=1.9  Score=36.03  Aligned_cols=36  Identities=14%  Similarity=0.278  Sum_probs=25.1

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHh----C-----CCcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIEN----F-----GVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~----~-----gV~y~ErDVs~d~~  161 (289)
                      ||.|+++      +|+.|++....|..    +     .|.|-.+|++.+++
T Consensus       151 ~v~f~a~------wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~  195 (241)
T 3idv_A          151 LVEFYAP------WCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETD  195 (241)
T ss_dssp             EEEEECT------TCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHH
T ss_pred             EEEEECC------CCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHH
Confidence            5556777      99999866544432    1     28899999987653

>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}

Probab=81.09  E-value=3.2  Score=35.47  Aligned_cols=45  Identities=9%  Similarity=0.063  Sum_probs=29.2

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C-----CCcEEEEEcCCChhHHHHHHHHHc
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F-----GVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~-----gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      -||.|+++      +|++|++....|+.    +     +|.+-.+|++.+.  ..++.+..+
T Consensus        33 vlv~F~a~------wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~--~~~l~~~~~   86 (244)
T 3q6o_A           33 WAVEFFAS------WCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEET--NSAVCRDFN   86 (244)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTT--THHHHHHTT
T ss_pred             EEEEEECC------cCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchh--hHHHHHHcC
Confidence            35566677      99999998777754    2     5778888885432  134444444

>1bg5_A MAB, fusion protein of alpha-Na,K-ATPase with glutathione S-transferase; ankyrin binding, carrier crystallization, ION transport; 2.60A {Rattus norvegicus} SCOP: a.45.1.1 c.47.1.5

Probab=81.07  E-value=0.3  Score=42.39  Aligned_cols=74  Identities=11%  Similarity=0.034  Sum_probs=46.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      +.||+..      .+++|.+++.+|+..||+|+.+.|+... ..+++.... ..        |.+       .   ..+|
T Consensus         3 ~~Ly~~~------~s~~~~~vr~~L~~~gi~ye~~~v~~~~-~~~~~~~~~-~~--------~~P-------~---g~VP   56 (254)
T 1bg5_A            3 PILGYWK------IKGLVQPTRLLLEYLEEKYEEHLYERDE-GDKWRNKKF-EL--------GLE-------F---PNLP   56 (254)
T ss_dssp             CBCCSCS------CSTTTHHHHHHHHHTTCCCBCCCCCGGG-THHHHHHTT-TT--------CCS-------S---CCSS
T ss_pred             cEEEEeC------CcchhHHHHHHHHHcCCCceEEeeCCCC-HHHHhhccc-cc--------CCC-------C---CCCC
Confidence            4566666      7899999999999999999988876421 112222211 00        000       1   1349


Q ss_pred             EEEECCeEEechHHHHHHHH
Q 041824          200 RVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       200 qIFI~G~~IGG~del~~L~E  219 (289)
                      .+..||..|.....+.++.+
T Consensus        57 vL~d~~~~l~eS~aI~~yL~   76 (254)
T 1bg5_A           57 YYIDGDVKLTQSMAIIRYIA   76 (254)
T ss_dssp             BCCCSSCCCBSHHHHHHHHH
T ss_pred             EEEECCEEEecHHHHHHHHH
Confidence            88877777777777766554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	289
d1t1va_	93	c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [Tax	8e-16
d1fova_	82	c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)	5e-07
d1ktea_	105	c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)	8e-06
d1wika_	109	c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (M	1e-05
d1egoa_	85	c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)	4e-05
d1nm3a1	74	c.47.1.1 (A:166-239) C-terminal, Grx domain of Hyb	5e-04
d1r7ha_	74	c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Cory	0.003

>d1t1va_ c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 93

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: SH3BGR (SH3-binding, glutamic acid-rich protein-like)
domain: SH3BGRL3
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.2 bits (169), Expect = 8e-16
 Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 21/110 (19%)

Query: 118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRS 177
           + + +Y+T++ G R+          +++   +     D+S D   ++E+R L    +   
Sbjct: 2   SGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKA-- 59

Query: 178 SSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELI 227
                                P++     Y G  E  +  VE+    E +
Sbjct: 60  -------------------TPPQIVNGNHYCGDYELFVEAVEQDTLQEFL 90

>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]} Length = 82

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli, Grx3 [TaxId: 562]

 Score = 44.6 bits (105), Expect = 5e-07
 Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 29/110 (26%)

Query: 119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSS 178
            V IYT            C  AK+++ + GV+  E  +  +   +EE+ +   R      
Sbjct: 2   NVEIYTKETCPY------CHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGR------ 49

Query: 179 SSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIE 228
                              +P++F+  +++GG +++  +   G    L++
Sbjct: 50  -----------------TTVPQIFIDAQHIGGYDDLYALDARGGLDPLLK 82

>d1ktea_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Pig (Sus scrofa) [TaxId: 9823]} Length = 105

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 42.0 bits (98), Expect = 8e-06
 Identities = 12/113 (10%), Positives = 33/113 (29%), Gaps = 25/113 (22%)

Query: 117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVS-MDRGFKEELRELMMRRRR 175
             KVV++         T   C+  + ++          +   +         +  +++  
Sbjct: 11  PGKVVVFIKP------TCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQL- 63

Query: 176 RSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIE 228
                                 +PRVF+    +GG  ++  + + G     ++
Sbjct: 64  -----------------TGARTVPRVFIGKECIGGCTDLESMHKRGELLTRLQ 99

>d1wika_ c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 109

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.5 bits (97), Expect = 1e-05
 Identities = 18/113 (15%), Positives = 40/113 (35%), Gaps = 24/113 (21%)

Query: 117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRR 176
           +  V+++    +   K     K    ++ + GV     D+  D   ++ L+         
Sbjct: 14  KASVMLFMKGNKQEAK-CGFSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSNW---- 68

Query: 177 SSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEG 229
                              P  P+++V+G  VGG + V  + + G    +++G
Sbjct: 69  -------------------PTYPQLYVRGDLVGGLDIVKELKDNGELLPILKG 102

>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli [TaxId: 562]} Length = 85

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli [TaxId: 562]

 Score = 39.2 bits (91), Expect = 4e-05
 Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 32/107 (29%)

Query: 119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVA-----VSERDVSMDRGFKEELRELMMRR 173
           + VI+  +          C  AK + E              D+  +   KE+L++   + 
Sbjct: 2   QTVIFGRSGCPY------CVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKP 55

Query: 174 RRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLRIVEE 220
                                   +P++FV  +++GG  +    V+E
Sbjct: 56  VE---------------------TVPQIFVDQQHIGGYTDFAAWVKE 81

>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]} Length = 74

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: C-terminal, Grx domain of Hybrid-Prx5
species: Haemophilus influenzae [TaxId: 727]

 Score = 36.1 bits (83), Expect = 5e-04
 Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 30/100 (30%)

Query: 117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRR 176
           +  + I+T            C  AK ++ + G++  E  +  D          +     R
Sbjct: 4   QESISIFTKPGCPF------CAKAKQLLHDKGLSFEEIILGHD-----ATIVSVRAVSGR 52

Query: 177 SSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEVLR 216
                                +P+VF+ G+++GG++++ +
Sbjct: 53  -------------------TTVPQVFIGGKHIGGSDDLEK 73

>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]} Length = 74

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin-like NRDH-redoxin
species: Corynebacterium ammoniagenes [TaxId: 1697]

 Score = 33.8 bits (77), Expect = 0.003
 Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 30/92 (32%)

Query: 119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSS 178
            + +YT            C A K  ++  G+A +  D+S+D   ++ +  L   +     
Sbjct: 2   SITLYTKP------ACVQCTATKKALDRAGLAYNTVDISLDDEARDYVMALGYVQ----- 50

Query: 179 SSNNNEEEAESSVQPLPPVLPRVFVKGRYVGG 210
                               P V V G +  G
Sbjct: 51  -------------------APVVEVDGEHWSG 63

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	289
d1t1va_	93	SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]}	99.9
d1fova_	82	Glutaredoxin (Grx, thioltransferase) {Escherichia	99.89
d1wika_	109	Thioredoxin-like protein 2 {Mouse (Mus musculus) [	99.87
d1ktea_	105	Glutaredoxin (Grx, thioltransferase) {Pig (Sus scr	99.83
d1nm3a1	74	C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus	99.74
d1egoa_	85	Glutaredoxin (Grx, thioltransferase) {Escherichia	99.71
d1r7ha_	74	Glutaredoxin-like NRDH-redoxin {Corynebacterium am	99.69
d1h75a_	76	Glutaredoxin-like NRDH-redoxin {Escherichia coli [	99.67
d1abaa_	87	Glutaredoxin (Grx, thioltransferase) {Bacteriophag	99.64
d1wjka_	100	Thioredoxin-like structure containing protein C330	98.84
d1ttza_	75	Hypothetical protein XCC2852 {Xanthomonas campestr	98.62
d1g7oa2	75	Glutaredoxin 2 {Escherichia coli [TaxId: 562]}	98.23
d1hyua4	96	Alkyl hydroperoxide reductase subunit F (AhpF), N-	98.19
d1gwca2	83	Class tau GST {Aegilops tauschii, also known as Tr	98.13
d1oyja2	84	Class tau GST {Rice (Oryza sativa) [TaxId: 4530]}	98.0
d1eema2	98	Class omega GST {Human (Homo sapiens) [TaxId: 9606	97.92
d1e6ba2	80	Class zeta GST {Mouse-ear cress (Arabidopsis thali	97.92
d1v2aa2	83	Class delta GST {Mosquito (Anopheles dirus b), iso	97.82
d1k0ma2	86	Chloride intracellular channel 1 (clic1) {Human (H	97.78
d1z9ha2	113	Microsomal prostaglandin E synthase-2 {Crab-eating	97.65
d1k0da2	92	Yeast prion protein ure2p, nitrogen regulation fra	97.57
d1fw1a2	83	Class zeta GST {Human (Homo sapiens) [TaxId: 9606]	97.44
d1z3ea1	114	Regulatory protein Spx {Bacillus subtilis [TaxId:	97.4
d1aw9a2	81	Class phi GST {Maize (Zea mays), type III [TaxId:	97.4
d1r5aa2	85	Class delta GST {Mosquito (Anopheles dirus b), iso	97.39
d1rw1a_	114	Hypothetical protein PA3664 (YffB) {Pseudomonas ae	97.33
d1ljra2	79	Class theta GST {Human (Homo sapiens) [TaxId: 9606	97.31
d1axda2	80	Class phi GST {Maize (Zea mays), type I [TaxId: 45	97.19
d1gnwa2	84	Class phi GST {Mouse-ear cress (Arabidopsis thalia	97.15
d1jlva2	84	Class delta GST {Mosquito (Anopheles dirus b), iso	96.98
d1nhoa_	85	MTH807, thioredoxin/glutaredoxin-like protein {Arc	96.87
d1j9ba_	138	Arsenate reductase ArsC {Escherichia coli [TaxId:	96.47
d1a8la2	107	Protein disulfide isomerase, PDI {Archaeon Pyrococ	96.32
d2a2ra2	77	Class pi GST {Human (Homo sapiens) [TaxId: 9606]}	96.3
d1fo5a_	85	MJ0307, thioredoxin/glutaredoxin-like protein {Arc	96.07
d1eeja1	156	Disulfide bond isomerase, DsbC, C-terminal domain	95.91
d1okta2	85	Pf GST {Malarial parasite (Plasmodium falciparum)	95.76
d2cvda2	74	Class sigma GST {Human (Homo sapiens) [TaxId: 9606	95.63
d1ep7a_	112	Thioredoxin {Chlamydomonas reinhardtii [TaxId: 305	95.47
d1thxa_	108	Thioredoxin {Anabaena sp., pcc 7120 [TaxId: 1167]}	95.27
d1r26a_	113	Thioredoxin {Trypanosoma brucei [TaxId: 5691]}	95.22
d1gula2	77	Class alpha GST {Human (Homo sapiens), (a1-1) [Tax	94.84
d1xfla_	114	Thioredoxin {Thale cress (Arabidopsis thaliana) [T	94.83
d1dbya_	107	Thioredoxin {Chlamydomonas reinhardtii [TaxId: 305	94.74
d1iloa_	77	MTH985, a thioredoxin {Archaeon Methanobacterium t	94.56
d1t3ba1	150	Disulfide bond isomerase, DsbC, C-terminal domain	94.53
d1syra_	103	Thioredoxin {Malarial parasite (Plasmodium falcipa	94.52
d1woua_	119	Putative 42-9-9 protein (thioredoxin containing pr	94.26
d1f9ma_	112	Thioredoxin {Spinach (Spinacia oleracea), thioredo	94.0
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	93.85
d2gsqa2	75	Class sigma GST {Squid (Ommastrephes sloani pacifi	93.78
d2ifqa1	105	Thioredoxin {Human (Homo sapiens) [TaxId: 9606]}	93.71
d1b48a2	78	Class alpha GST {Mouse (Mus musculus), (a1-4) [Tax	93.53
d1ti3a_	113	Thioredoxin {European aspen (Populus tremula), thi	93.51
d1nw2a_	105	Thioredoxin {Alicyclobacillus acidocaldarius, form	93.48
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	93.42
d1gh2a_	107	Thioredoxin-like protein, N-terminal domain {Human	93.38
d1xwaa_	111	Thioredoxin {Fruit fly (Drosophila melanogaster) [	93.15
d2trxa_	108	Thioredoxin {Escherichia coli [TaxId: 562]}	92.86
d1fb6a_	104	Thioredoxin {Spinach (Spinacia oleracea), thioredo	92.8
d1zmaa1	115	Bacterocin transport accessory protein Bta {Strept	92.42
d1m0ua2	76	Class sigma GST {Fruit fly (Drosophila melanogaste	91.81
d1k3ya2	79	Class alpha GST {Human (Homo sapiens), (a1-1) [Tax	91.65
d1qgva_	137	spliceosomal protein U5-15Kd {Human (Homo sapiens)	91.04
d1duga2	80	Class alpha GST {Schistosoma japonicum [TaxId: 618	90.23
d1z6ma1	172	Hypothetical protein EF0770 {Enterococcus faecalis	89.86
d1tu7a2	77	Class pi GST {Onchocerca volvulus [TaxId: 6282]}	89.54
d2c4ja2	84	Class mu GST {Human (Homo sapiens) [TaxId: 9606]}	89.24
d1tw9a2	77	Class sigma GST {Heligmosomoides polygyrus [TaxId:	88.71
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	88.39
d2b5ea4	119	Protein disulfide isomerase, PDI {Baker's yeast (S	87.4
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	87.24
d1xg8a_	111	Hypothetical protein SA0798 {Staphylococcus aureus	86.89
d1n2aa2	80	Class beta GST {Escherichia coli [TaxId: 562]}	86.69
d2fnoa2	87	Hypothetical protein AGR_pAT_752p/Atu5508 {Agrobac	86.32
d2fwha1	117	Thiol:disulfide interchange protein DsbD, C-termin	85.74
d1fhea2	80	Class alpha GST {Fasciola hepatica [TaxId: 6192]}	84.23
d1f2ea2	80	Class beta GST {Sphingomonas paucimobilis [TaxId:	83.05
d1knga_	144	Thioredoxin-like protein CcmG (CycY, DsbE) {Bradyr	82.97
d1pmta2	80	Class beta GST {Proteus mirabilis [TaxId: 584]}	82.57
d2es7a1	119	Hydrogenase-1 operon protein HyaE {Salmonella typh	81.28

>d1t1va_ c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: SH3BGR (SH3-binding, glutamic acid-rich protein-like)
domain: SH3BGRL3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=4.5e-24  Score=165.29  Aligned_cols=92  Identities=20%  Similarity=0.362  Sum_probs=84.7

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      +..|+||+||+.|+|++..+|.+|++||+++||+|+++||++|++.+++++++.|..                  ..++ 
T Consensus         1 m~~i~vy~ts~~~~~~~~~~~~r~~~lL~~~~I~y~~iDi~~d~~~~~~~~~~~g~~------------------~~t~-   61 (93)
T d1t1va_           1 MSGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNP------------------KATP-   61 (93)
T ss_dssp             CCCEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSCHHHHHHHHHHTTCT------------------TCCS-
T ss_pred             CCCEEEEEccCcCChhhHHHHHHHHHHHHHCCCceEEEEecCchhHHHHHHHhccCC------------------Ccee-
Confidence            467999999999999999999999999999999999999999999999999987642                  2345 


Q ss_pred             CCCEEEECCeEEechHHHHHHHHhCcHHHHhcc
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEG  229 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~  229 (289)
                        |||||||+||||+|++.+|+|+|+|.++|+.
T Consensus        62 --Pqifv~~~~iGg~del~~~~e~g~L~~~lk~   92 (93)
T d1t1va_          62 --PQIVNGNHYCGDYELFVEAVEQDTLQEFLKL   92 (93)
T ss_dssp             --CEEEETTEEEEEHHHHHHHHHTTCHHHHTTC
T ss_pred             --EEEEECCEEEecHHHHHHHHHCCCHHHHhcc
Confidence              9999999999999999999999999999975

>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli, Grx3 [TaxId: 562]

Probab=99.89  E-value=2.8e-23  Score=156.32  Aligned_cols=81  Identities=25%  Similarity=0.450  Sum_probs=76.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      .|+||+++      +|++|.+||++|+.+||+|+++||+.+++.+++|.++.|.+                    ++   
T Consensus         2 ~I~iys~~------~Cp~C~~ak~~L~~~~i~y~~~di~~~~~~~~~~~~~~g~~--------------------tv---   52 (82)
T d1fova_           2 NVEIYTKE------TCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRT--------------------TV---   52 (82)
T ss_dssp             CEEEEECS------SCHHHHHHHHHHHHHTCCCEEEECTTCSHHHHHHHHHHSSC--------------------CS---
T ss_pred             cEEEEeCC------CCHhHHHHHHHHHHcCCCeEEEeccchHHHHHHHHHHhCCC--------------------CC---
Confidence            59999999      99999999999999999999999999999999999987653                    55   


Q ss_pred             CEEEECCeEEechHHHHHHHHhCcHHHHhc
Q 041824          199 PRVFVKGRYVGGAEEVLRIVEEGWFGELIE  228 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~E~G~L~~lL~  228 (289)
                      |||||||++|||++++.+|+++|+|+++|+
T Consensus        53 P~i~i~~~~IGG~~el~~l~~~g~L~~lLk   82 (82)
T d1fova_          53 PQIFIDAQHIGGYDDLYALDARGGLDPLLK   82 (82)
T ss_dssp             CEEEETTEEEESHHHHHHHHHTTCSHHHHC
T ss_pred             CeEEECCEEEecHHHHHHHHHcCCHHHHhC
Confidence            999999999999999999999999999985

>d1wika_ c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=3.3e-22  Score=159.81  Aligned_cols=94  Identities=17%  Similarity=0.299  Sum_probs=82.0

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      .+++||||++..+ ....|+||.+||++|+.+||+|.++||+.+++.+++|.+..+..                    |+
T Consensus        13 ~~~~VvvF~Kgt~-~~p~Cp~c~~ak~lL~~~~i~~~~~~v~~~~~~~~~l~~~t~~~--------------------Tv   71 (109)
T d1wika_          13 NKASVMLFMKGNK-QEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSNWP--------------------TY   71 (109)
T ss_dssp             TTSSEEEEESSTT-TCCCSSTHHHHHHHHHHTCSCEEEEESSSCHHHHHHHHHHHSCC--------------------SS
T ss_pred             hcCCEEEEeCCCC-CCCCChHHHHHHHHHHhcCCCceEEEecccHHHHHHHHHhcCCC--------------------CC
Confidence            4778999999511 12369999999999999999999999999999999999887642                    56


Q ss_pred             CCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCCCc
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIPIR  233 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~~~  233 (289)
                         |||||+|++|||+|+|++|+++|+|.++|+.....
T Consensus        72 ---PqIFi~g~~IGG~ddl~~l~~~G~L~~lL~~~~~~  106 (109)
T d1wika_          72 ---PQLYVRGDLVGGLDIVKELKDNGELLPILKGESGP  106 (109)
T ss_dssp             ---CEEECSSSEEECHHHHHHHHHHTCSHHHHHTCCSC
T ss_pred             ---CeEEECCEEEcCHHHHHHHHHCCCHHHHHHhcCCC
Confidence               99999999999999999999999999999886543

>d1ktea_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.83  E-value=7.4e-21  Score=149.98  Aligned_cols=87  Identities=17%  Similarity=0.323  Sum_probs=71.8

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCc-----EEEEEcCCChhHHH-HHHHHHcccccccCCCCCcchhhcc
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVA-----VSERDVSMDRGFKE-ELRELMMRRRRRSSSSNNNEEEAES  189 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~-----y~ErDVs~d~~~re-EL~~llg~~~~~~~~s~~~~~~g~~  189 (289)
                      .+++||||+++      +|++|.+||++|+.+|++     |.++|+..|....+ .+++..|.                 
T Consensus        10 ~~~~Vviysk~------~Cp~C~~ak~ll~~~~~~~~~~~~~e~d~~~d~~~~~~~l~~~~g~-----------------   66 (105)
T d1ktea_          10 QPGKVVVFIKP------TCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGA-----------------   66 (105)
T ss_dssp             CTTCEEEEECS------SCHHHHHHHHHHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSC-----------------
T ss_pred             ccCCEEEEECC------CCchHHHHHHHHHHhCCccceeeeeecccccccHHHHHHHhhccCC-----------------
Confidence            46789999999      999999999999999987     56667777654433 44555443                 


Q ss_pred             CCCCCCCCCCEEEECCeEEechHHHHHHHHhCcHHHHhccCC
Q 041824          190 SVQPLPPVLPRVFVKGRYVGGAEEVLRIVEEGWFGELIEGIP  231 (289)
Q Consensus       190 t~~~tv~~LPqIFI~G~~IGG~del~~L~E~G~L~~lL~~~~  231 (289)
                         .++   |||||||+||||++||.+|+++|+|.++|+.+.
T Consensus        67 ---~tv---PqIfi~g~~IGG~~el~~l~~~G~L~~~L~~~G  102 (105)
T d1ktea_          67 ---RTV---PRVFIGKECIGGCTDLESMHKRGELLTRLQQVG  102 (105)
T ss_dssp             ---CCS---CEEEETTEEEESHHHHHHHHHHTHHHHHHHHHT
T ss_pred             ---CcC---cEEEECCEEEecHHHHHHHHHCCCHHHHHHHcC
Confidence               355   999999999999999999999999999998654

>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: C-terminal, Grx domain of Hybrid-Prx5
species: Haemophilus influenzae [TaxId: 727]

Probab=99.74  E-value=2.9e-18  Score=126.42  Aligned_cols=70  Identities=23%  Similarity=0.468  Sum_probs=60.3

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      +.+|+||+++      +|++|++||++|+.+||+|+++||+.+.. ++++.+..|.                    .++ 
T Consensus         4 ~~~I~iYs~~------~C~~C~~ak~lL~~~~i~~~~~~v~~~~~-~~~~~~~~~~--------------------~tv-   55 (74)
T d1nm3a1           4 QESISIFTKP------GCPFCAKAKQLLHDKGLSFEEIILGHDAT-IVSVRAVSGR--------------------TTV-   55 (74)
T ss_dssp             CCCEEEEECS------SCHHHHHHHHHHHHHTCCCEEEETTTTCC-HHHHHHHTCC--------------------SSS-
T ss_pred             cCcEEEEECC------CCHHHHHHHHHHHHcCCCeEEEEccCcHH-HHHHHHHhCC--------------------ccC-
Confidence            5689999999      99999999999999999999999998865 4566655443                    255 


Q ss_pred             CCCEEEECCeEEechHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLR  216 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~  216 (289)
                        |||||||++|||++||.+
T Consensus        56 --P~i~i~g~~IGG~~el~~   73 (74)
T d1nm3a1          56 --PQVFIGGKHIGGSDDLEK   73 (74)
T ss_dssp             --CEEEETTEEEESHHHHHH
T ss_pred             --CEEEECCEEEEChHHHhh
Confidence              999999999999999875

>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=1.7e-18  Score=130.94  Aligned_cols=75  Identities=23%  Similarity=0.375  Sum_probs=64.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCC-----CcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFG-----VAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~g-----V~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      +||||+++      +|++|.+||++|+++|     |+|+++|+..+++.++++.++.+..                  . 
T Consensus         2 kvviysk~------~Cp~C~~aK~ll~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------------------~-   56 (85)
T d1egoa_           2 QTVIFGRS------GCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKP------------------V-   56 (85)
T ss_dssp             EEEEECCT------TSTHHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCC------------------S-
T ss_pred             EEEEEeCC------CCHhHHHHHHHHHHcCCCCCCceEEEEecCCCHHHHHHHHHHhcCC------------------C-
Confidence            69999999      9999999999999965     7889999988878888998876542                  1 


Q ss_pred             CCCCCCEEEECCeEEechHHHHHHHHh
Q 041824          194 LPPVLPRVFVKGRYVGGAEEVLRIVEE  220 (289)
Q Consensus       194 tv~~LPqIFI~G~~IGG~del~~L~E~  220 (289)
                        .++|||||||++|||++||.+++++
T Consensus        57 --~tvPqIfi~g~~IGG~~el~~~~~~   81 (85)
T d1egoa_          57 --ETVPQIFVDQQHIGGYTDFAAWVKE   81 (85)
T ss_dssp             --CCSCEEEETTEEEESSHHHHHHHHH
T ss_pred             --CCCCEEEECCEEEECHHHHHHHHHh
Confidence              2459999999999999999998874

>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin-like NRDH-redoxin
species: Corynebacterium ammoniagenes [TaxId: 1697]

Probab=99.69  E-value=5.4e-17  Score=119.11  Aligned_cols=69  Identities=23%  Similarity=0.382  Sum_probs=59.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +|+||+++      +|++|.+||++|+.+||+|+++||+.|++.+++++.. |.+                    ++   
T Consensus         2 ~v~iYt~~------~C~~C~~ak~~L~~~~i~~~~~~i~~~~~~~~~~~~~-g~~--------------------tv---   51 (74)
T d1r7ha_           2 SITLYTKP------ACVQCTATKKALDRAGLAYNTVDISLDDEARDYVMAL-GYV--------------------QA---   51 (74)
T ss_dssp             CEEEEECT------TCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHHT-TCB--------------------CC---
T ss_pred             EEEEEeCC------CChhHHHHHHHHHHcCCceEEEEccCCHHHHHHHHHh-CCC--------------------Cc---
Confidence            59999999      9999999999999999999999999999888887653 432                    45   


Q ss_pred             CEEEECCeEEechH--HHHHH
Q 041824          199 PRVFVKGRYVGGAE--EVLRI  217 (289)
Q Consensus       199 PqIFI~G~~IGG~d--el~~L  217 (289)
                      |||||||++||||+  +|.+|
T Consensus        52 P~i~i~g~~igGf~~d~l~~L   72 (74)
T d1r7ha_          52 PVVEVDGEHWSGFRPERIKQL   72 (74)
T ss_dssp             CEEEETTEEEESCCHHHHHHH
T ss_pred             CEEEECCEEEeCCCHhHHHHh
Confidence            99999999999984  44443

>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin-like NRDH-redoxin
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=5.6e-17  Score=120.15  Aligned_cols=70  Identities=26%  Similarity=0.292  Sum_probs=60.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +|+||+++      +|++|.+||++|+.+||+|+++||+.+++.+++++. .|.+                    ++   
T Consensus         2 ki~iYs~~------~C~~C~~ak~~L~~~~i~y~~~~i~~~~~~~~~~~~-~g~~--------------------tv---   51 (76)
T d1h75a_           2 RITIYTRN------DCVQCHATKRAMENRGFDFEMINVDRVPEAAEALRA-QGFR--------------------QL---   51 (76)
T ss_dssp             CEEEEECT------TCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHH-TTCC--------------------SS---
T ss_pred             EEEEEeCC------CCccHHHHHHHHHhcCceeEEEeecCCHHHHHHHHh-cCCC--------------------CC---
Confidence            59999999      999999999999999999999999999988888765 3432                    45   


Q ss_pred             CEEEECCeEEech--HHHHHHH
Q 041824          199 PRVFVKGRYVGGA--EEVLRIV  218 (289)
Q Consensus       199 PqIFI~G~~IGG~--del~~L~  218 (289)
                      |+|||||++||||  |.|.+|+
T Consensus        52 P~i~i~~~~i~Gf~~d~i~~L~   73 (76)
T d1h75a_          52 PVVIAGDLSWSGFRPDMINRLH   73 (76)
T ss_dssp             CEEEETTEEEESCCHHHHGGGS
T ss_pred             CEEEECCEEEECCCHHHHHHHh
Confidence            9999999999998  6665544

>d1abaa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.64  E-value=4.3e-16  Score=118.84  Aligned_cols=79  Identities=16%  Similarity=0.217  Sum_probs=60.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC-----hhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD-----RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d-----~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      +.||+.+.  -...|++|.+||++|+.+||+|+++|+..+     ...++|+.+..+..               .+++.|
T Consensus         2 ~~Iy~~~~--~~~~C~~C~~AK~lL~~~~i~y~~~~i~~~~~~~~~~~~~e~~~~~~~~---------------~~~~~T   64 (87)
T d1abaa_           2 FKVYGYDS--NIHKCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRD---------------TQIGLT   64 (87)
T ss_dssp             EEEEECCT--TTSCCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCS---------------CCTTCC
T ss_pred             EEEEEeCC--CCCCChhHHHHHHHHHHcCCCceeccccccccccCHHHHHHHHHHhccc---------------CCCCce
Confidence            46898771  122499999999999999999999999753     45567777776643               123445


Q ss_pred             CCCCCEEEE-CCeEEechHHHHHHH
Q 041824          195 PPVLPRVFV-KGRYVGGAEEVLRIV  218 (289)
Q Consensus       195 v~~LPqIFI-~G~~IGG~del~~L~  218 (289)
                      +   ||||| ||+||||++||+++.
T Consensus        65 v---PqIfi~dg~~IGG~del~e~~   86 (87)
T d1abaa_          65 M---PQVFAPDGSHIGGFDQLREYF   86 (87)
T ss_dssp             S---CEEECTTSCEEESHHHHHHHT
T ss_pred             e---CeEEecCCcEEECHHHHHHHh
Confidence            5   99999 699999999998875

>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like structure containing protein C330018D20Rik
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.84  E-value=1.4e-09  Score=83.73  Aligned_cols=81  Identities=11%  Similarity=0.158  Sum_probs=63.7

Q ss_pred             CCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          115 DGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       115 ~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      ..+..|++|++.      +|+.|+.++.+|+.+.+.|.++++..|.+..++|.++.+.                     .
T Consensus        14 ~~~p~i~lft~~------~C~~C~~a~~~L~~~~~~~~~~~v~vd~~~~~~l~~~y~~---------------------~   66 (100)
T d1wjka_          14 RALPVLTLFTKA------PCPLCDEAKEVLQPYKDRFILQEVDITLPENSTWYERYKF---------------------D   66 (100)
T ss_dssp             CCCCEEEEEECS------SCHHHHHHHHHTSTTSSSSEEEEEETTSSTTHHHHHHSSS---------------------S
T ss_pred             CCCCEEEEEECC------CCCChHHHHHHHHHhhhhcceEEEecccccCHHHHHHhcc---------------------c
Confidence            356789999999      9999999999999999999988888777777888887653                     2


Q ss_pred             CCCCCEEEECCeEE--echHHHHHHHHhCcHHHHhccCCC
Q 041824          195 PPVLPRVFVKGRYV--GGAEEVLRIVEEGWFGELIEGIPI  232 (289)
Q Consensus       195 v~~LPqIFI~G~~I--GG~del~~L~E~G~L~~lL~~~~~  232 (289)
                      +   |+|||||+.+  |.+++       .+|++.|+.+..
T Consensus        67 V---Pvl~idg~~~~~g~~d~-------~~L~~~L~~l~~   96 (100)
T d1wjka_          67 I---PVFHLNGQFLMMHRVNT-------SKLEKQLRKLSG   96 (100)
T ss_dssp             C---SEEEESSSEEEESSCCH-------HHHHHHHHSSSC
T ss_pred             C---CceeecCceEEeCCCCH-------HHHHHHHHHHhc
Confidence            4   9999999764  34443       257777776554

>d1ttza_ c.47.1.1 (A:) Hypothetical protein XCC2852 {Xanthomonas campestris [TaxId: 339]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Hypothetical protein XCC2852
species: Xanthomonas campestris [TaxId: 339]

Probab=98.62  E-value=4.8e-08  Score=72.41  Aligned_cols=44  Identities=14%  Similarity=0.126  Sum_probs=37.2

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh-CCCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN-FGVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~-~gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      .|+||||+      +|..|..|+++|.. +++.|+++||+.|+    +|.++.|.
T Consensus         1 altLyt~~------~C~LCe~A~~~l~~~~~~~~~~vdI~~d~----~l~~~y~~   45 (75)
T d1ttza_           1 ALTLYQRD------DCHLCDQAVEALAQARAGAFFSVFIDDDA----ALESAYGL   45 (75)
T ss_dssp             CEEEEECS------SCHHHHHHHHHHHHTTCCCEEEEECTTCH----HHHHHHTT
T ss_pred             CEEEECCC------CccHHHHHHHHHHhccCCcEEEEEccCCH----HHHHHhCC
Confidence            38999999      99999999998755 68999999999885    56666664

>d1g7oa2 c.47.1.5 (A:1-75) Glutaredoxin 2 {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Glutaredoxin 2
species: Escherichia coli [TaxId: 562]

Probab=98.23  E-value=3.3e-06  Score=61.38  Aligned_cols=68  Identities=15%  Similarity=0.235  Sum_probs=55.1

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCE
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPR  200 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPq  200 (289)
                      -||+..      .||+|++||.+|..+||+|+.+++..+.  .+++.++.+..                    ++   |.
T Consensus         2 kLY~~~------~cP~~~rvr~~l~~kgi~~e~~~~~~~~--~~~~~~~~p~~--------------------~V---P~   50 (75)
T d1g7oa2           2 KLYIYD------HCPYCLKARMIFGLKNIPVELHVLLNDD--AETPTRMVGQK--------------------QV---PI   50 (75)
T ss_dssp             EEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTTT--THHHHHHHSSS--------------------CC---CE
T ss_pred             EEEccC------CCCchHHHHHHHHHhCCCcccccccccc--hHHHHHhCCCC--------------------ce---EE
Confidence            489988      9999999999999999999999986553  35666665532                    56   99


Q ss_pred             EEE-CCeEEechHHHHHHHH
Q 041824          201 VFV-KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       201 IFI-~G~~IGG~del~~L~E  219 (289)
                      +.. ||+.|....++.+..+
T Consensus        51 L~~~dg~~i~eS~~I~~yLd   70 (75)
T d1g7oa2          51 LQKDDSRYMPESMDIVHYVD   70 (75)
T ss_dssp             EEETTTEEEECHHHHHHHHH
T ss_pred             EEEcCCCEEecHHHHHHHHH
Confidence            997 6799999999887654

>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: PDI-like
domain: Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.19  E-value=2e-06  Score=64.69  Aligned_cols=73  Identities=19%  Similarity=0.287  Sum_probs=51.8

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESS  190 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t  190 (289)
                      +...|++|+++      +|++|+.++.+|+..     .|.+..+|++.+++    +.+..+.                  
T Consensus        15 ~~~~i~~F~s~------~C~~C~~~~p~~~~~a~~~~~i~~~~vd~~~~~~----l~~~~~I------------------   66 (96)
T d1hyua4          15 GDFEFETYYSL------SCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQN----EITERNV------------------   66 (96)
T ss_dssp             SCEEEEEEECT------TCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCHH----HHHHTTC------------------
T ss_pred             CCeEEEEEECC------CCcchHHHHHHHHHHHHhCCceEEEEEecccchH----HHhhccc------------------
Confidence            44568889999      999999999999854     57888999987754    3333343                  


Q ss_pred             CCCCCCCCCEEEECCeEEe-ch---HHHHHHHHhC
Q 041824          191 VQPLPPVLPRVFVKGRYVG-GA---EEVLRIVEEG  221 (289)
Q Consensus       191 ~~~tv~~LPqIFI~G~~IG-G~---del~~L~E~G  221 (289)
                           ..+|.+|+||+.++ |.   ++|.+..++|
T Consensus        67 -----~~vPt~~~ng~~~~~G~~~~~~l~~~lesg   96 (96)
T d1hyua4          67 -----MGVPAVFVNGKEFGQGRMTLTEIVAKVDTG   96 (96)
T ss_dssp             -----CSSSEEEETTEEEEESCCCHHHHHHHHCCS
T ss_pred             -----ccccEEEECCEEEEecCCCHHHHHHHHhCC
Confidence                 23499999999875 44   4444444433

>d1gwca2 c.47.1.5 (A:4-86) Class tau GST {Aegilops tauschii, also known as Triticum tauschii [TaxId: 37682]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class tau GST
species: Aegilops tauschii, also known as Triticum tauschii [TaxId: 37682]

Probab=98.13  E-value=5.1e-06  Score=60.42  Aligned_cols=73  Identities=11%  Similarity=0.084  Sum_probs=56.1

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +++.||...      .|++|++||.+|..+||+|+.+.|..... .+++.++....                   ..+  
T Consensus         2 ~~mkLy~~~------~sp~~~rvr~~l~~kgi~~e~~~v~~~~~-~~~~~~~~~~~-------------------~~~--   53 (83)
T d1gwca2           2 DDLKLLGAW------PSPFVTRVKLALALKGLSYEDVEEDLYKK-SELLLKSNPVH-------------------KKI--   53 (83)
T ss_dssp             CCEEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTTSC-CHHHHHHSTTT-------------------CCS--
T ss_pred             CeEEEEecC------CChHHHHHHHHHHHCCCCeEEEEEeccch-hHHHHHHHhcc-------------------CCC--
Confidence            358899998      99999999999999999999999976432 23444443211                   134  


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                       |.+..||..|.....+.+..+
T Consensus        54 -p~l~~dg~~i~eS~~I~~YL~   74 (83)
T d1gwca2          54 -PVLIHNGAPVCESMIILQYID   74 (83)
T ss_dssp             -CEEEETTEEEESHHHHHHHHH
T ss_pred             -ceeecCCceEcCHHHHHHHHH
Confidence             999999999999888877654

>d1oyja2 c.47.1.5 (A:2-85) Class tau GST {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class tau GST
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=98.00  E-value=1.4e-05  Score=59.25  Aligned_cols=75  Identities=13%  Similarity=0.147  Sum_probs=59.0

Q ss_pred             CCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          116 GENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       116 ~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      .++++++|...      .|++|++||.+|..+||+|+.+.|+.... .+++.++....                   .++
T Consensus         2 ~~~~l~Ly~~~------~Sp~~~rvr~~L~~kgi~~e~~~v~~~~~-~~~~~~~nP~~-------------------g~v   55 (84)
T d1oyja2           2 EEKELVLLDFW------VSPFGQRCRIAMAEKGLEFEYREEDLGNK-SDLLLRSNPVH-------------------RKI   55 (84)
T ss_dssp             CSCCEEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTTSC-CHHHHHHSTTT-------------------CCS
T ss_pred             CCCceEEEcCC------CChHHHHHHHHHHHcCCCcEEEEEccCcC-CHHHHhhCCCc-------------------Ccc
Confidence            46789999988      99999999999999999999999976432 34555553211                   135


Q ss_pred             CCCCEEEECCeEEechHHHHHHHH
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                         |.+..||..|-....+.+..+
T Consensus        56 ---P~L~~~g~~l~eS~~I~~YL~   76 (84)
T d1oyja2          56 ---PVLLHAGRPVSESLVILQYLD   76 (84)
T ss_dssp             ---CEEEETTEEEESHHHHHHHHH
T ss_pred             ---cEEEECCceEEcHHHHHHHHH
Confidence               999999999999888887665

>d1eema2 c.47.1.5 (A:5-102) Class omega GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class omega GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=1.2e-05  Score=61.22  Aligned_cols=76  Identities=13%  Similarity=0.136  Sum_probs=56.6

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCC
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQP  193 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~  193 (289)
                      |..+.++.||...      .|++|++|+.+|..+||+|+.+.|+... ..+++.++...                    .
T Consensus        14 ~~~~~~~~Ly~~~------~sP~~~rv~~~l~~kgi~~e~~~v~~~~-~~~~~~~~nP~--------------------g   66 (98)
T d1eema2          14 PVPEGSIRIYSMR------FCPFAERTRLVLKAKGIRHEVININLKN-KPEWFFKKNPF--------------------G   66 (98)
T ss_dssp             CCCTTCEEEEECT------TCHHHHHHHHHHHHTTCCEEEEEBCTTS-CCGGGGGTCTT--------------------C
T ss_pred             CCCCCcEEEEcCC------CChHHHHHHHHHHHhCCCCEEEEecccC-CcHHHHhhhcc--------------------c
Confidence            4456689999999      9999999999999999999999887532 12333332211                    1


Q ss_pred             CCCCCCEEEE-CCeEEechHHHHHHHH
Q 041824          194 LPPVLPRVFV-KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       194 tv~~LPqIFI-~G~~IGG~del~~L~E  219 (289)
                      ++   |.+.. +|..|.....+.++.+
T Consensus        67 ~V---PvL~~~dg~~i~eS~aI~~YL~   90 (98)
T d1eema2          67 LV---PVLENSQGQLIYESAITCEYLD   90 (98)
T ss_dssp             CS---CEEEETTCCEEESHHHHHHHHH
T ss_pred             cc---eeEEeCCCCEEcCHHHHHHHHH
Confidence            44   99988 5789988888877654

>d1e6ba2 c.47.1.5 (A:8-87) Class zeta GST {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class zeta GST
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.92  E-value=3.1e-05  Score=56.40  Aligned_cols=72  Identities=8%  Similarity=0.135  Sum_probs=55.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC--hhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD--RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d--~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      |+.||...      .|++|++|+.+|+.+||+|+.+.|+..  ....+++.++...                    ..+ 
T Consensus         1 ~m~Ly~~~------~sp~~~kv~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~--------------------~~v-   53 (80)
T d1e6ba2           1 KLKLYSYW------RSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPM--------------------GTV-   53 (80)
T ss_dssp             CCEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCTTTTGGGCHHHHHHCTT--------------------CCS-
T ss_pred             CEEEEeCC------CChHHHHHHHHHHHhCCCCEEEEEeccccccccHHHhhcCcc--------------------ccC-
Confidence            46789888      999999999999999999999888753  2234455544222                    134 


Q ss_pred             CCCEEEECCeEEechHHHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E  219 (289)
                        |.+..||..|-....+.+..+
T Consensus        54 --PvL~~~~~~l~eS~aI~~yL~   74 (80)
T d1e6ba2          54 --PALVDGDVVINDSFAIIMYLD   74 (80)
T ss_dssp             --SEEEETTEEEESHHHHHHHHH
T ss_pred             --CEEEECCEEEECHHHHHHHHH
Confidence              999999999999888877654

>d1v2aa2 c.47.1.5 (A:1-83) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-6 [TaxId: 123217]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class delta GST
species: Mosquito (Anopheles dirus b), isozyme 1-6 [TaxId: 123217]

Probab=97.82  E-value=6.1e-05  Score=55.05  Aligned_cols=69  Identities=14%  Similarity=0.243  Sum_probs=54.8

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCC-ChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSM-DRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~-d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      .+|...      .+++|++|+.+|+.+||+|+.+.|+. ..+.++++.++...                    .++   |
T Consensus         2 ~LY~~~------~Sp~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~nP~--------------------g~V---P   52 (83)
T d1v2aa2           2 DYYYSL------ISPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKLNPQ--------------------HTI---P   52 (83)
T ss_dssp             EEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCTT--------------------CCS---C
T ss_pred             EEECCC------CChHHHHHHHHHHHhCCCceEEEEeCCCCcchHHHHHHhhc--------------------cCC---C
Confidence            589998      89999999999999999999998875 34456666655332                    145   9


Q ss_pred             EEEECCeEEechHHHHHHH
Q 041824          200 RVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       200 qIFI~G~~IGG~del~~L~  218 (289)
                      .+..||..|-....+.+..
T Consensus        53 ~L~~~g~~l~eS~aI~~YL   71 (83)
T d1v2aa2          53 TLVDNGHVVWESYAIVLYL   71 (83)
T ss_dssp             EEEETTEEEESHHHHHHHH
T ss_pred             EEEEccceeEcHHHHHHHH
Confidence            9999999999888877754

>d1k0ma2 c.47.1.5 (A:6-91) Chloride intracellular channel 1 (clic1) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Chloride intracellular channel 1 (clic1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=3.1e-05  Score=57.63  Aligned_cols=77  Identities=14%  Similarity=0.109  Sum_probs=57.7

Q ss_pred             cEEEEEecCC-CC-CCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLR-GI-RKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLr-gv-R~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      .+.+|.+.-. |- ...||+|++|+.+|..+||+|+.+.|++.. ..++++++....                    .+ 
T Consensus         2 ~i~l~~ka~~dg~~~~~cPf~~rv~~~L~~kgi~~~~~~v~~~~-~~~~~~~~nP~~--------------------~v-   59 (86)
T d1k0ma2           2 QVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKR-RTETVQKLCPGG--------------------EL-   59 (86)
T ss_dssp             CEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEECTTS-CCHHHHHHCTTC--------------------CS-
T ss_pred             cEEEEEecCCCcCcCCCCHhHHHHHHHHHHHCCCcEEEEeeccc-ccHHHHHHhccC--------------------ce-
Confidence            4778877632 11 137999999999999999999999887642 235666664321                    34 


Q ss_pred             CCCEEEECCeEEechHHHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E  219 (289)
                        |.+..||+.|.....+.+..+
T Consensus        60 --PvL~~~~~~i~eS~~I~~YLe   80 (86)
T d1k0ma2          60 --PFLLYGTEVHTDTNKIEEFLE   80 (86)
T ss_dssp             --SEEEETTEEEECHHHHHHHHH
T ss_pred             --eEEEEcccccccHHHHHHHHH
Confidence              999999999999988887654

>d1z9ha2 c.47.1.5 (A:100-212) Microsomal prostaglandin E synthase-2 {Crab-eating macaque (Macaca fascicularis) [TaxId: 9541]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Microsomal prostaglandin E synthase-2
species: Crab-eating macaque (Macaca fascicularis) [TaxId: 9541]

Probab=97.65  E-value=3.2e-05  Score=59.71  Aligned_cols=69  Identities=9%  Similarity=0.223  Sum_probs=51.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +++||+..      +||+|.+||.+|+.+||+|+.++|+....  +++. ..                    +..++   
T Consensus         2 ~i~LY~~~------~sP~~~kvr~~L~~k~l~~~~~~v~~~~~--~~~~-~~--------------------~~~~v---   49 (113)
T d1z9ha2           2 QLTLYQYK------TCPFCSKVRAFLDFHALPYQVVEVNPVLR--AEIK-FS--------------------SYRKV---   49 (113)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHTTCCEEEEECCTTTC--GGGT-TC--------------------SCCSS---
T ss_pred             EEEEEcCC------CChHHHHHHHHHHHcCCeeEEeccCcccc--hhhc-cC--------------------ccccc---
Confidence            58999998      99999999999999999999999975322  2211 11                    12245   


Q ss_pred             CEEEEC----CeEEechHHHHHHHH
Q 041824          199 PRVFVK----GRYVGGAEEVLRIVE  219 (289)
Q Consensus       199 PqIFI~----G~~IGG~del~~L~E  219 (289)
                      |.++++    |+.|+....+.+..+
T Consensus        50 P~l~~~~~~~g~~i~eS~~Ii~YL~   74 (113)
T d1z9ha2          50 PILVAQEGESSQQLNDSSVIISALK   74 (113)
T ss_dssp             CEEEEEETTEEEEECSHHHHHHHHH
T ss_pred             cccccccCCCceEeecHHHHHHHHH
Confidence            998753    489999999887654

>d1k0da2 c.47.1.5 (A:109-200) Yeast prion protein ure2p, nitrogen regulation fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Yeast prion protein ure2p, nitrogen regulation fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.57  E-value=0.0002  Score=53.27  Aligned_cols=74  Identities=8%  Similarity=0.060  Sum_probs=54.6

Q ss_pred             CCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh--HHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          117 ENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG--FKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~--~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      +..++||+..      .|++|.+|+.+|+.+|++|+.+.|+....  ...++.+...                    ..+
T Consensus         3 ~~~~tLY~~~------~sp~~~kV~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~np--------------------~g~   56 (92)
T d1k0da2           3 LEGYTLFSHR------SAPNGFKVAIVLSELGFHYNTIFLDFNLGEHRAPEFVSVNP--------------------NAR   56 (92)
T ss_dssp             SSSEEEEECT------TCHHHHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHTTCT--------------------TCC
T ss_pred             CCceEEeeCC------CCccHHHHHHHHHHcCCCCEEEEeeccCCcccCHHHHHHhh--------------------ccc
Confidence            4569999999      99999999999999999999998876432  1233333211                    113


Q ss_pred             CCCCCEEEE---CCeEEechHHHHHHHH
Q 041824          195 PPVLPRVFV---KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       195 v~~LPqIFI---~G~~IGG~del~~L~E  219 (289)
                      +   |.+..   ||..|.-...+.++.+
T Consensus        57 v---P~L~d~~~~~~~l~ES~aI~~YL~   81 (92)
T d1k0da2          57 V---PALIDHGMDNLSIWESGAILLHLV   81 (92)
T ss_dssp             S---CEEEEGGGTTEEEESHHHHHHHHH
T ss_pred             c---ceeEEecccceEEcCHHHHHHHHH
Confidence            4   99986   7888887777776554

>d1fw1a2 c.47.1.5 (A:5-87) Class zeta GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class zeta GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=0.00041  Score=50.58  Aligned_cols=71  Identities=10%  Similarity=0.192  Sum_probs=54.5

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC----hhHHHHHHHHHcccccccCCCCCcchhhccCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD----RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLP  195 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d----~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv  195 (289)
                      -|+|+-.      .+++|++|+.+|..+|++|+.+.|+..    ....+++.++...                    .++
T Consensus         2 piLY~~~------~S~~s~rvr~~L~ekgi~~e~~~v~l~~~~~~~~~~~~~~~nP~--------------------g~v   55 (83)
T d1fw1a2           2 PILYSYF------RSSCSWRVRIALALKGIDYKTVPINLIKDGGQQFSKDFQALNPM--------------------KQV   55 (83)
T ss_dssp             CEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCSSTTSCGGGSHHHHHHCTT--------------------CCS
T ss_pred             CEEEcCC------CChHHHHHHHHHHHhCCCCEEEeccccccccccCCHHHHHhccC--------------------Ccc
Confidence            4799998      889999999999999999998877642    2233556555322                    144


Q ss_pred             CCCCEEEECCeEEechHHHHHHHH
Q 041824          196 PVLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       196 ~~LPqIFI~G~~IGG~del~~L~E  219 (289)
                         |.+..||..|.....+.+..+
T Consensus        56 ---P~L~~~g~~i~eS~aI~~yL~   76 (83)
T d1fw1a2          56 ---PTLKIDGITIHQSLAIIEYLE   76 (83)
T ss_dssp             ---CEEEETTEEEESHHHHHHHHH
T ss_pred             ---CEEEECCEEEecHHHHHHHHH
Confidence               999999999998888877654

>d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Regulatory protein Spx
species: Bacillus subtilis [TaxId: 1423]

Probab=97.40  E-value=0.00012  Score=56.88  Aligned_cols=47  Identities=19%  Similarity=0.455  Sum_probs=41.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      |+||..+      .|.-|++|+++|+.+||+|+.+|+..++--.+||.+++..
T Consensus         2 i~ly~~~------~C~~~rka~~~L~~~~i~~~~~d~~~~p~s~~eL~~ll~~   48 (114)
T d1z3ea1           2 VTLYTSP------SCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRM   48 (114)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHHT
T ss_pred             EEEEcCC------CCHHHHHHHHHHHHCCCCeEEEeeeccCCCHHHHHHHHHH
Confidence            6799999      9999999999999999999999999887667788877643

>d1aw9a2 c.47.1.5 (A:2-82) Class phi GST {Maize (Zea mays), type III [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class phi GST
species: Maize (Zea mays), type III [TaxId: 4577]

Probab=97.40  E-value=8.2e-05  Score=54.17  Aligned_cols=71  Identities=10%  Similarity=0.081  Sum_probs=52.6

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.||...      .|++|++|+.+|+.+||+|+.+.|+...  ...+++.++..                    ..++  
T Consensus         3 m~Ly~~~------~sp~~~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP--------------------~g~v--   54 (81)
T d1aw9a2           3 LKLYGMP------LSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNP--------------------FGQI--   54 (81)
T ss_dssp             EEEESCT------TCHHHHHHHHHHHHTTCCEEEECCCSSTTSSCCCSGGGTCT--------------------TCCS--
T ss_pred             EEEEeCC------CChhHHHHHHHHHhcCCCCEEEEecCCCcchhhHHHHHHhh--------------------cCee--
Confidence            7899888      9999999999999999999998886432  11222322211                    1134  


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                       |.+..||..|.....+.+..+
T Consensus        55 -P~L~~~~~~l~eS~aI~~YL~   75 (81)
T d1aw9a2          55 -PALVDGDEVLFESRAINRYIA   75 (81)
T ss_dssp             -CEEEETTEEEESHHHHHHHHH
T ss_pred             -EEEEECCcEEECHHHHHHHHH
Confidence             999999999998888877654

>d1r5aa2 c.47.1.5 (A:2-86) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-5 [TaxId: 123217]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class delta GST
species: Mosquito (Anopheles dirus b), isozyme 1-5 [TaxId: 123217]

Probab=97.39  E-value=0.00045  Score=50.70  Aligned_cols=70  Identities=16%  Similarity=0.236  Sum_probs=54.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC--hhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD--RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d--~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +|+|...      .+++|++|+.+|+.+|++|+.+.|+..  ....+++.++...                    .++  
T Consensus         2 ~iLY~~~------~S~~~~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~--------------------g~v--   53 (85)
T d1r5aa2           2 TVLYYLP------ASPPCRSVLLLAKMIGVELDLKVLNIMEGEQLKPDFVELNPQ--------------------HCI--   53 (85)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHTTCTT--------------------CCS--
T ss_pred             EEEEcCC------CCHhHHHHHHHHHHcCCCCEEEEecCCCcccCCHHHHHHHhc--------------------CCC--
Confidence            7899999      999999999999999999999888753  2334455544221                    134  


Q ss_pred             CCEEEECCeEEechHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~  218 (289)
                       |.+..||..|-....+.+..
T Consensus        54 -P~L~~~~~~l~ES~aI~~YL   73 (85)
T d1r5aa2          54 -PTMDDHGLVLWESRVILSYL   73 (85)
T ss_dssp             -SEEEETTEEEECHHHHHHHH
T ss_pred             -CEEEEcccceecHHHHHHHH
Confidence             99999999998888777654

>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Hypothetical protein PA3664 (YffB)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.33  E-value=7e-05  Score=58.01  Aligned_cols=45  Identities=22%  Similarity=0.239  Sum_probs=37.4

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELM  170 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~ll  170 (289)
                      |+||+.+      .|.-|++|+++|+.+||+|+++|+..++=-.+||.+++
T Consensus         2 ~~iY~~p------~Cs~srka~~~L~~~~i~~~~idy~k~pls~~eL~~ll   46 (114)
T d1rw1a_           2 YVLYGIK------ACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWC   46 (114)
T ss_dssp             EEEEECS------SCHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHHH
T ss_pred             EEEEECC------CChHHHHHHHHHHHcCCCeEEEEccccCCCHHHHHHHH
Confidence            7999999      99999999999999999999999976543344554443

>d1ljra2 c.47.1.5 (A:1-79) Class theta GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class theta GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=0.00045  Score=49.50  Aligned_cols=71  Identities=11%  Similarity=0.149  Sum_probs=53.4

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh--HHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG--FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~--~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.||...      .+++|++|+.+|+.+|++|+.+.|+....  ..+++.+....                    ..+  
T Consensus         3 m~LY~~~------~sp~~r~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~np~--------------------g~v--   54 (79)
T d1ljra2           3 LELFLDL------VSQPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSL--------------------GKL--   54 (79)
T ss_dssp             CEEEECT------TSHHHHHHHHHHHHTTCCCEEEECCTTTTGGGSHHHHTTCTT--------------------CCS--
T ss_pred             EEEeeCC------CChHHHHHHHHHHHhCCCCEEEeeeccccccCCHHHHHhhhh--------------------cce--
Confidence            6799998      88999999999999999999998875432  23444433221                    134  


Q ss_pred             CCEEEECCeEEechHHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~E  219 (289)
                       |.+..||..|-....+.+..+
T Consensus        55 -P~L~d~~~~l~ES~aI~~yL~   75 (79)
T d1ljra2          55 -PTLKDGDFILTESSAILIYLS   75 (79)
T ss_dssp             -CEEEETTEEEECHHHHHHHHH
T ss_pred             -eEEEeCCcEEEcHHHHHHHHH
Confidence             999999999988877776544

>d1axda2 c.47.1.5 (A:1-80) Class phi GST {Maize (Zea mays), type I [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class phi GST
species: Maize (Zea mays), type I [TaxId: 4577]

Probab=97.19  E-value=0.00041  Score=50.36  Aligned_cols=72  Identities=8%  Similarity=-0.000  Sum_probs=54.4

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh--HHHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG--FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~--~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      .+.||...      .+++|.+|+.+|+.+|++|+.++|+....  ..+++.++...                    ..+ 
T Consensus         2 p~~Ly~~~------~S~~~~kv~~~L~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~--------------------g~V-   54 (80)
T d1axda2           2 PMKLYGAV------MSWNLTRCATALEEAGSDYEIVPINFATAEHKSPEHLVRNPF--------------------GQV-   54 (80)
T ss_dssp             CEEEESCT------TCTTHHHHHHHHHHHTCCEEEECCCTTTTGGGSHHHHTTCTT--------------------CCS-
T ss_pred             CEEEEECC------CChHHHHHHHHHHHcCCCCEEEEecCCccchhhHHHHHhhcc--------------------ccC-
Confidence            37899999      89999999999999999999998875432  23444443221                    134 


Q ss_pred             CCCEEEECCeEEechHHHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIVE  219 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~E  219 (289)
                        |.+..||..|.....+.+..+
T Consensus        55 --P~L~~~~~~l~ES~aI~~YL~   75 (80)
T d1axda2          55 --PALQDGDLYLFESRAICKYAA   75 (80)
T ss_dssp             --CEEEETTEEEESHHHHHHHHH
T ss_pred             --CEEEECCEEEECHHHHHHHHH
Confidence              999999998988887776554

>d1gnwa2 c.47.1.5 (A:2-85) Class phi GST {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class phi GST
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.15  E-value=0.00044  Score=50.55  Aligned_cols=70  Identities=9%  Similarity=0.017  Sum_probs=51.4

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh--HHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG--FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~--~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.+|...      .|++|++|+.+|+.+|++|+.+.|+....  ..+++.++..                    ..++  
T Consensus         2 ~kLY~~~------~s~~~~~v~~~l~e~gl~~e~~~v~~~~~~~~~~~~~~~nP--------------------~g~v--   53 (84)
T d1gnwa2           2 IKVFGHP------ASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNP--------------------FGQV--   53 (84)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSTTGGGTCT--------------------TCCS--
T ss_pred             eEEEeCC------CChHHHHHHHHHHHcCCCcEeecccCCcccccHHHHHHHhh--------------------cCcc--
Confidence            6789998      99999999999999999999988875321  2223332211                    1134  


Q ss_pred             CCEEEECCeEEechHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~  218 (289)
                       |.+..||..|-....+.+..
T Consensus        54 -P~L~~~~~~l~ES~aI~~YL   73 (84)
T d1gnwa2          54 -PAFEDGDLKLFESRAITQYI   73 (84)
T ss_dssp             -CEEEETTEEEECHHHHHHHH
T ss_pred             -eEEEECCcEEecHHHHHHHH
Confidence             99999999998877776654

>d1jlva2 c.47.1.5 (A:1-84) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-3 [TaxId: 123217]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class delta GST
species: Mosquito (Anopheles dirus b), isozyme 1-3 [TaxId: 123217]

Probab=96.98  E-value=0.0021  Score=46.86  Aligned_cols=70  Identities=13%  Similarity=0.186  Sum_probs=52.9

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC--hhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD--RGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d--~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +.+|...      .+++|++|+.+|+.+||+|+.+.|+..  ....+++.++...                    .++  
T Consensus         1 mkLY~~~------~S~~~~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~--------------------g~v--   52 (84)
T d1jlva2           1 MDFYYLP------GSAPCRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKINPQ--------------------HCI--   52 (84)
T ss_dssp             CEEEECT------TCHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHCTT--------------------CCS--
T ss_pred             CEEEcCC------CCHHHHHHHHHHHHcCCCCEEEEecCCCCccCCHHHHHHhcc--------------------ccC--
Confidence            3588888      899999999999999999999888742  2234456655322                    145  


Q ss_pred             CCEEEECCeEEechHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~  218 (289)
                       |.+..||..|--...+.+..
T Consensus        53 -P~L~d~~~~l~ES~aI~~yL   72 (84)
T d1jlva2          53 -PTLVDNGFALWESRAICTYL   72 (84)
T ss_dssp             -CEEEETTEEEESHHHHHHHH
T ss_pred             -CEEEECCEEEEcHHHHHHHH
Confidence             99999999888777776654

>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: MTH807, thioredoxin/glutaredoxin-like protein
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.87  E-value=0.00031  Score=50.72  Aligned_cols=60  Identities=23%  Similarity=0.437  Sum_probs=43.4

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQ  192 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~  192 (289)
                      +|++|+++      +|++|++++.+|+.    +  .|.+..+|++.+++.    ....+                     
T Consensus         4 ~v~~F~a~------wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~d~~~~l----~~~~~---------------------   52 (85)
T d1nhoa_           4 NIEVFTSP------TCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREK----AIEYG---------------------   52 (85)
T ss_dssp             CEEEESCS------SSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGG----GGGTC---------------------
T ss_pred             EEEEEECC------CCcchHHHHHHHhhhcccccccccccccccccchhh----HHhcC---------------------
Confidence            58889999      99999999988875    3  377888888876542    22222                     


Q ss_pred             CCCCCCCEEEECCe--EEech
Q 041824          193 PLPPVLPRVFVKGR--YVGGA  211 (289)
Q Consensus       193 ~tv~~LPqIFI~G~--~IGG~  211 (289)
                        +..+|.++++|+  ++|..
T Consensus        53 --V~~~Pt~~~~~~~~~~G~~   71 (85)
T d1nhoa_          53 --LMAVPAIAINGVVRFVGAP   71 (85)
T ss_dssp             --SSCSSEEEETTTEEEECSS
T ss_pred             --ceEeCEEEECCcEEEEcCC
Confidence              344599999874  67653

>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Arsenate reductase ArsC
species: Escherichia coli [TaxId: 562]

Probab=96.47  E-value=0.001  Score=53.20  Aligned_cols=44  Identities=18%  Similarity=0.217  Sum_probs=37.3

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELREL  169 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~l  169 (289)
                      |.||..+      .|.-|++|.++|+++||+|+.+|+..++=-.+||..+
T Consensus         2 i~iY~~p------~Cs~srkal~~L~~~~i~~~~idy~k~pls~~eL~~l   45 (138)
T d1j9ba_           2 ITIYHNP------ACGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKL   45 (138)
T ss_dssp             CEEECCT------TCHHHHHHHHHHHHTTCCCEEECTTTSCCCHHHHHHH
T ss_pred             eEEEECC------CCHHHHHHHHHHHHCCCCeEEEeeccCCCCHHHHHHH
Confidence            7899999      9999999999999999999999998765444555444

>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: PDI-like
domain: Protein disulfide isomerase, PDI
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=96.32  E-value=0.005  Score=45.19  Aligned_cols=35  Identities=14%  Similarity=0.226  Sum_probs=27.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC----------CCcEEEEEcCCCh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF----------GVAVSERDVSMDR  160 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~----------gV~y~ErDVs~d~  160 (289)
                      |++|+++      +|++|++++.+|...          .|.+..+|+..++
T Consensus        19 i~~F~a~------wC~~C~~~~p~~~~la~~~~~~~~~~v~~~~id~~~~~   63 (107)
T d1a8la2          19 ILVFVTP------TCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYP   63 (107)
T ss_dssp             EEEEECS------SCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCH
T ss_pred             EEEEEcC------ccccchhhChhHHhhhhhhhhccCCcEEEEEecccccc
Confidence            4458888      999999999888653          3667788887654

>d2a2ra2 c.47.1.5 (A:1-77) Class pi GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class pi GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0098  Score=41.91  Aligned_cols=71  Identities=15%  Similarity=0.156  Sum_probs=49.9

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      ++.+|.-.      ....|+.+|.+|...||+|+++.|+.+.....+....  .                     ....|
T Consensus         2 ~~~L~yf~------~~g~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~--~---------------------p~g~v   52 (77)
T d2a2ra2           2 PYTVVYFP------VRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKAS--C---------------------LYGQL   52 (77)
T ss_dssp             SEEEEECS------SSGGGHHHHHHHHHTTCCEEEEECCHHHHHHSHHHHH--S---------------------TTSCS
T ss_pred             CEEEEEcC------CchhHHHHHHHHHHcCCCcEEEEeccccccccccccc--C---------------------CCCCC
Confidence            36677777      4578999999999999999999997533211111111  1                     11245


Q ss_pred             CEEEECCeEEechHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~  218 (289)
                      |.+..||..|.....+.+..
T Consensus        53 P~L~~~g~~i~eS~aI~~yL   72 (77)
T d2a2ra2          53 PKFQDGDLTLYQSNTILRHL   72 (77)
T ss_dssp             CEEEETTEEEECHHHHHHHH
T ss_pred             CEEEECCEeeecHHHHHHHH
Confidence            99999999998888777654

>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: MJ0307, thioredoxin/glutaredoxin-like protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.07  E-value=0.00065  Score=48.46  Aligned_cols=36  Identities=31%  Similarity=0.456  Sum_probs=25.7

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh----CC--CcEEEEEcCCCh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN----FG--VAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~----~g--V~y~ErDVs~d~  160 (289)
                      .|++|+++      +|++|+++..+++.    ++  +.+..+|.+.++
T Consensus         5 ~v~~F~a~------wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~d~~~   46 (85)
T d1fo5a_           5 KIELFTSP------MCPHCPAAKRVVEEVANEMPDAVEVEYINVMENP   46 (85)
T ss_dssp             EEEEEECC------CSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSC
T ss_pred             EEEEEECC------CCcChHhhhhhccccccccccccccccccccccc
Confidence            46778899      99999998888764    33  445566666543

>d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: DsbC/DsbG C-terminal domain-like
domain: Disulfide bond isomerase, DsbC, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=95.91  E-value=0.015  Score=46.07  Aligned_cols=37  Identities=16%  Similarity=0.411  Sum_probs=24.6

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHh---CCCcEEEEEc
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVIEN---FGVAVSERDV  156 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~---~gV~y~ErDV  156 (289)
                      +..+..|++|+=.      .||||+++...|+.   .++.+..+.+
T Consensus        24 ~~ak~tIv~FsD~------~CpyC~~~~~~l~~~~~~~~~~~~~~~   63 (156)
T d1eeja1          24 PQEKHVITVFTDI------TCGYCHKLHEQMADYNALGITVRYLAF   63 (156)
T ss_dssp             TTCCEEEEEEECT------TCHHHHHHHTTHHHHHHTTEEEEEEEC
T ss_pred             CCCCEEEEEEeCC------CCHHHHHHHHHHHHhhccCceEEEEec
Confidence            3344457777777      99999998655443   4666666655

>d1okta2 c.47.1.5 (A:1-85) Pf GST {Malarial parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Pf GST
species: Malarial parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.76  E-value=0.033  Score=39.69  Aligned_cols=76  Identities=9%  Similarity=0.253  Sum_probs=52.4

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      ++|++|.-.++      ..++.+|-+|+..||+|+++.++.+.....+.+......                  ......
T Consensus         3 ~~i~L~Y~~~~------gr~e~irl~L~~~gi~ye~~~~~~~~~~~~~~~~~~~~~------------------~~p~g~   58 (85)
T d1okta2           3 DNIVLYYFDAR------GKAELIRLIFAYLGIEYTDKRFGVNGDAFVEFKNFKKEK------------------DTPFEQ   58 (85)
T ss_dssp             CCEEEEEESSS------TTTHHHHHHHHHHTCCCEEEEETSSSCHHHHHHHHHHHS------------------CCSSSC
T ss_pred             CCeEEEEcCCc------hhhHHHHHHHHHcCCCceEEEEcccccchhhhhhhhhcc------------------cccCCC
Confidence            47889877744      577899999999999999998887544333333221111                  001235


Q ss_pred             CCEEEECCeEEechHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRI  217 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L  217 (289)
                      +|.+-+||..|.....+.+.
T Consensus        59 lP~l~~~g~~l~eS~AI~~y   78 (85)
T d1okta2          59 VPILQIGDLILAQSQAIVRY   78 (85)
T ss_dssp             SCEEEETTEEEECHHHHHHH
T ss_pred             CCeeecCCCEEecHHHHHHH
Confidence            69999999999887776654

>d2cvda2 c.47.1.5 (A:2-75) Class sigma GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class sigma GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.032  Score=39.23  Aligned_cols=69  Identities=7%  Similarity=0.093  Sum_probs=50.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      ++.+|.-.      ....|+.+|.+|...||+|+++.+..+.  ..+.++...                       ...+
T Consensus         2 ~~kL~yf~------~~~~~~~vRl~L~~~gi~~e~~~~~~~~--~~~~~~~~p-----------------------~g~v   50 (74)
T d2cvda2           2 NYKLTYFN------MRGRAEIIRYIFAYLDIQYEDHRIEQAD--WPEIKSTLP-----------------------FGKI   50 (74)
T ss_dssp             CEEEEEES------SSGGGHHHHHHHHHTTCCCEEEEECGGG--HHHHHTTST-----------------------TSCS
T ss_pred             cEEEEEcC------CcHHHHHHHHHHHHcCCCCEeccccccc--chhhcccCC-----------------------CCCc
Confidence            46677777      5689999999999999999999987532  233322111                       1245


Q ss_pred             CEEEECCeEEechHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~  218 (289)
                      |.+.+||..|.....+.+..
T Consensus        51 P~L~~~g~~l~qS~AI~~yL   70 (74)
T d2cvda2          51 PILEVDGLTLHQSLAIARYL   70 (74)
T ss_dssp             CEEEETTEEEECHHHHHHHH
T ss_pred             CEEEECCEEEEcHHHHHHHH
Confidence            99999999998887776654

>d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii [TaxId: 3055]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Chlamydomonas reinhardtii [TaxId: 3055]

Probab=95.47  E-value=0.045  Score=40.83  Aligned_cols=36  Identities=25%  Similarity=0.414  Sum_probs=27.1

Q ss_pred             EEE-EEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          120 VVI-YTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVV-YttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      |+| |+++      +|++|+.++..|+.    +  .|.|-.+|++.+++
T Consensus        27 vvv~f~a~------wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~d~~~~   69 (112)
T d1ep7a_          27 IVVDFTAT------WCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAA   69 (112)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHH
T ss_pred             EEEEEEcC------CcCCCcccchhhhhhhhcccceEEEEEeecccccc
Confidence            555 5556      99999999888864    3  37888999987653

>d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId: 1167]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Anabaena sp., pcc 7120 [TaxId: 1167]

Probab=95.27  E-value=0.059  Score=39.36  Aligned_cols=38  Identities=11%  Similarity=0.299  Sum_probs=27.9

Q ss_pred             CcEEE-EEecCCCCCCCCHHHHHHHHHHHh----C--CCcEEEEEcCCChh
Q 041824          118 NKVVI-YTTTLRGIRKTYEACKAAKSVIEN----F--GVAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVV-YttSLrgvR~tC~~C~~ak~iL~~----~--gV~y~ErDVs~d~~  161 (289)
                      +.|+| |+++      +|+.|++++.+|+.    +  .+.+-.+|++.+++
T Consensus        21 ~~vlv~f~a~------wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~d~~~~   65 (108)
T d1thxa_          21 QPVLVYFWAS------WCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPT   65 (108)
T ss_dssp             SCEEEEEECT------TCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHH
T ss_pred             CcEEEEEECC------CCCCccccchHHHHHHHhcCCcceeceecccccHH
Confidence            33544 6666      99999999988864    3  36778899987754

>d1r26a_ c.47.1.1 (A:) Thioredoxin {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.22  E-value=0.021  Score=43.00  Aligned_cols=36  Identities=19%  Similarity=0.321  Sum_probs=28.5

Q ss_pred             EEE-EEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChh
Q 041824          120 VVI-YTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVV-YttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~  161 (289)
                      |+| |+++      +|+.|++++..|+..     +|.|-.+|++.+++
T Consensus        29 vvv~F~a~------wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~   70 (113)
T d1r26a_          29 TVAWFTAV------WCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSE   70 (113)
T ss_dssp             EEEEEECT------TCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHH
T ss_pred             EEEEEECC------CCccchhhceeccccccccccccccccccccchh
Confidence            555 5667      999999999888763     78899999987654

>d1gula2 c.47.1.5 (A:4-80) Class alpha GST {Human (Homo sapiens), (a1-1) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Human (Homo sapiens), (a1-1) [TaxId: 9606]

Probab=94.84  E-value=0.057  Score=37.95  Aligned_cols=71  Identities=14%  Similarity=0.144  Sum_probs=47.6

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLP  199 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LP  199 (289)
                      .++|.-+      .-..+..+|.+|+..||+|+++.+....... ..+. .+..                    ....||
T Consensus         2 pkL~yf~------~~g~~~~vR~~L~~~gi~ye~~~~~~~~~~~-~~~~-~~~~--------------------p~g~lP   53 (77)
T d1gula2           2 PKLHYPN------GRGRMESVRWVLAAAGVEFDEEFLETKEQLY-KLQD-GNHL--------------------LFQQVP   53 (77)
T ss_dssp             CEEEEES------SCTTTHHHHHHHHHTTCCCEEEEECSHHHHH-HHHH-TTCS--------------------TTSCSC
T ss_pred             CEEEEcC------CcchHHHHHHHHHHcCCCceEEeeccccccc-hhhh-cccC--------------------CCCCCC
Confidence            4566666      4477899999999999999988887533221 1111 1110                    113459


Q ss_pred             EEEECCeEEechHHHHHHH
Q 041824          200 RVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       200 qIFI~G~~IGG~del~~L~  218 (289)
                      .+-+||..|.....+.+..
T Consensus        54 vL~~~g~~l~eS~AI~~yL   72 (77)
T d1gula2          54 MVEIDGMKLVQTRSILHYI   72 (77)
T ss_dssp             EEEETTEEEESHHHHHHHH
T ss_pred             EEEECCEeeecHHHHHHHH
Confidence            9999999998877776543

>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.83  E-value=0.072  Score=39.65  Aligned_cols=37  Identities=16%  Similarity=0.305  Sum_probs=27.5

Q ss_pred             EEE-EEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChhH
Q 041824          120 VVI-YTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRGF  162 (289)
Q Consensus       120 VVV-YttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~~  162 (289)
                      |+| |+++      +|+.|+++...|+..     ++.|..+|++.+++.
T Consensus        31 vlv~F~a~------wC~~C~~~~p~~~~l~~~~~~~~~~~vd~~~~~~l   73 (114)
T d1xfla_          31 VVVDFTAS------WCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSV   73 (114)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHHH
T ss_pred             EEEEEEcC------CCCCccccccchhhhcccccccceeEEEeeeceee
Confidence            444 6667      999999988877652     577788888877543

>d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii [TaxId: 3055]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Chlamydomonas reinhardtii [TaxId: 3055]

Probab=94.74  E-value=0.1  Score=37.90  Aligned_cols=38  Identities=8%  Similarity=0.230  Sum_probs=27.2

Q ss_pred             CcEEE-EEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCChh
Q 041824          118 NKVVI-YTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVV-YttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~~  161 (289)
                      +.|+| |+++      +|++|+++...|...      .+.+-.+|++.+++
T Consensus        20 kpvlv~F~a~------wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~d~~~~   64 (107)
T d1dbya_          20 VPVLVDFWAP------WCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPN   64 (107)
T ss_dssp             SCEEEEEECT------TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred             CcEEEEEECC------CCCCccccChHHHHHHHhhcccceEEEEecccchh
Confidence            34555 6777      999999998776542      45677888887653

>d1iloa_ c.47.1.1 (A:) MTH985, a thioredoxin {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: MTH985, a thioredoxin
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.56  E-value=0.042  Score=40.11  Aligned_cols=55  Identities=22%  Similarity=0.440  Sum_probs=39.6

Q ss_pred             cEEEEEecCCCCCCCCHHHH----HHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACK----AAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPL  194 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~----~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~t  194 (289)
                      +|-|+ .+      .|..|.    .++++++++|+.++..+|..   + +|+.+ .|                       
T Consensus         3 ~IkVl-g~------gC~~C~~~~~~v~~a~~e~gi~a~v~kv~d---~-~ei~~-yg-----------------------   47 (77)
T d1iloa_           3 KIQIY-GT------GCANCQMLEKNAREAVKELGIDAEFEKIKE---M-DQILE-AG-----------------------   47 (77)
T ss_dssp             EEEEE-CS------SSSTTHHHHHHHHHHHHHTTCCEEEEEECS---H-HHHHH-HT-----------------------
T ss_pred             EEEEe-CC------CCccHHHHHHHHHHHHHHcCCceEEEEeCC---H-HHHHH-cC-----------------------
Confidence            57777 45      899998    56667889999999999962   2 33433 23                       


Q ss_pred             CCCCCEEEECCeEE
Q 041824          195 PPVLPRVFVKGRYV  208 (289)
Q Consensus       195 v~~LPqIFI~G~~I  208 (289)
                      +.+.|.+.|||+.+
T Consensus        48 VmstPalvIdg~vv   61 (77)
T d1iloa_          48 LTALPGLAVDGELK   61 (77)
T ss_dssp             CSSSSCEEETTEEE
T ss_pred             CcCCCEEEECCEEE
Confidence            23449999999865

>d1t3ba1 c.47.1.9 (A:61-210) Disulfide bond isomerase, DsbC, C-terminal domain {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: DsbC/DsbG C-terminal domain-like
domain: Disulfide bond isomerase, DsbC, C-terminal domain
species: Haemophilus influenzae [TaxId: 727]

Probab=94.53  E-value=0.044  Score=43.03  Aligned_cols=37  Identities=14%  Similarity=0.329  Sum_probs=23.4

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHh---CCCcEEEEEc
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVIEN---FGVAVSERDV  156 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~---~gV~y~ErDV  156 (289)
                      +..+..|++|+=.      .||||+++...++.   .++.+..+..
T Consensus        24 ~~ak~~I~~FsD~------~CPyC~~~~~~l~~l~~~~~~v~~~~~   63 (150)
T d1t3ba1          24 KNEKHVVTVFMDI------TCHYCHLLHQQLKEYNDLGITVRYLAF   63 (150)
T ss_dssp             TTCSEEEEEEECT------TCHHHHHHHTTHHHHHHTTEEEEEEEC
T ss_pred             CCCCEEEEEEECC------CCHHHHHHhHHHHHHhccCceEEEEEe
Confidence            3444457777777      99999988764443   3444544443

>d1syra_ c.47.1.1 (A:) Thioredoxin {Malarial parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Malarial parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=94.52  E-value=0.13  Score=37.29  Aligned_cols=36  Identities=17%  Similarity=0.176  Sum_probs=27.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChh
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~  161 (289)
                      ||.|+++      +|+.|+.+...|+..     ++.|-.+|++.+++
T Consensus        22 vv~F~a~------wC~~C~~~~~~~~~l~~~~~~~~~~~vd~d~~~~   62 (103)
T d1syra_          22 IVDFFAE------WCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSE   62 (103)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHH
T ss_pred             EEEEeCC------cccCcccccccchhhhhcccceEEEeeccccCcc
Confidence            4446666      999999988877653     67788899987653

>d1woua_ c.47.1.16 (A:) Putative 42-9-9 protein (thioredoxin containing protein Txnl5) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Txnl5-like
domain: Putative 42-9-9 protein (thioredoxin containing protein Txnl5)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.26  E-value=0.049  Score=41.43  Aligned_cols=43  Identities=19%  Similarity=0.207  Sum_probs=29.3

Q ss_pred             CcEEEEEecC---CCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCChh
Q 041824          118 NKVVIYTTTL---RGIRKTYEACKAAKSVIENF------GVAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVVYttSL---rgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~~  161 (289)
                      +.|+||.++-   .| ..||++|+++.-+|+..      ++.|-.+||...++
T Consensus        22 k~v~v~F~a~~~~~g-~sWC~pCk~~~P~~~~l~~~~~~~~~~~~vdv~~~~~   73 (119)
T d1woua_          22 KTIFAYFTGSKDAGG-KSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPY   73 (119)
T ss_dssp             SEEEEEEECCBCTTC-CBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHH
T ss_pred             CEEEEEEEecCCCCC-CCCChhHHHHHHHHHHHHHhcCCceEEEEEECCCCcc
Confidence            3577887652   12 34899999999988753      35677888865433

>d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea), thioredoxin F [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Spinach (Spinacia oleracea), thioredoxin F [TaxId: 3562]

Probab=94.00  E-value=0.24  Score=36.72  Aligned_cols=46  Identities=22%  Similarity=0.244  Sum_probs=31.3

Q ss_pred             CcEEE-EEecCCCCCCCCHHHHHHHHHHHh-----CCCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          118 NKVVI-YTTTLRGIRKTYEACKAAKSVIEN-----FGVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       118 ~kVVV-YttSLrgvR~tC~~C~~ak~iL~~-----~gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      +.|+| |+++      +|+.|+.+...|+.     .++.+-.+|++.+   ..+|.+.++-
T Consensus        26 k~vvv~f~a~------wC~~C~~~~p~~~~l~~~~~~v~~~~vd~~~~---~~~l~~~~~V   77 (112)
T d1f9ma_          26 KPVVLDMFTQ------WCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQE---NKTLAKELGI   77 (112)
T ss_dssp             SCEEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEECSST---THHHHHHHCC
T ss_pred             CEEEEEEEcC------CCcchHHHHHHHhhhccccccceeeccccccc---chhhHhheee
Confidence            34555 5566      99999999988875     4677888888642   1345555554

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.85  E-value=0.018  Score=41.20  Aligned_cols=52  Identities=23%  Similarity=0.502  Sum_probs=33.5

Q ss_pred             cccCCCCcee-----EeCCCCCCcceeeeccCCCCc--cccccCCccCcCCcc-----cCCCCC
Q 041824          238 VCQGCADVRF-----FPCFRCNGSCKLVINMQPRGK--TAALRCPDCNENGLV-----LCPLCS  289 (289)
Q Consensus       238 ~C~~Cgg~rf-----vpC~~C~GS~K~~~~~~~~g~--~~~~rC~~CNENGLv-----rCp~C~  289 (289)
                      .|..|.|.+.     ..|..|+|+-+++........  .....|+.|+-.|.+     +|+.|.
T Consensus         4 ~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~~~C~~C~   67 (74)
T d1nlta3           4 LCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCN   67 (74)
T ss_dssp             ECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTTSBCSSST
T ss_pred             CCcCCcccccCCCCCCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCCCCCCCCCC
Confidence            5777777774     459999998766543221111  124579999988865     588873

>d2gsqa2 c.47.1.5 (A:1-75) Class sigma GST {Squid (Ommastrephes sloani pacificus) [TaxId: 6634]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class sigma GST
species: Squid (Ommastrephes sloani pacificus) [TaxId: 6634]

Probab=93.78  E-value=0.15  Score=35.67  Aligned_cols=69  Identities=17%  Similarity=0.230  Sum_probs=50.1

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      +..+|.-.++      ..|+.+|.+|...||+|+++.+.++.  ..+++....                       ...|
T Consensus         2 ~~~L~yf~~~------g~~~~iRl~L~~~gi~ye~~~~~~~~--~~~~~~~~p-----------------------~g~l   50 (75)
T d2gsqa2           2 KYTLHYFPLM------GRAELCRFVLAAHGEEFTDRVVEMAD--WPNLKATMY-----------------------SNAM   50 (75)
T ss_dssp             CEEEEECSSS------GGGHHHHHHHHHTTCCCEEEECCTTT--HHHHGGGSG-----------------------GGSS
T ss_pred             CEEEEecCCc------hhHHHHHHHHHHcCCCchhhcccccc--chhhhhccc-----------------------cCCc
Confidence            3567777744      78999999999999999999987653  233332211                       1235


Q ss_pred             CEEEECCeEEechHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~  218 (289)
                      |.+.+||..|.....+.+..
T Consensus        51 PvL~~~g~~i~eS~aI~~yL   70 (75)
T d2gsqa2          51 PVLDIDGTKMSQSMCIARHL   70 (75)
T ss_dssp             CEEEETTEEECCHHHHHHHH
T ss_pred             CEEEECCeeeecHHHHHHHH
Confidence            99999999998888777654

>d2ifqa1 c.47.1.1 (A:1-105) Thioredoxin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.71  E-value=0.21  Score=36.25  Aligned_cols=38  Identities=26%  Similarity=0.360  Sum_probs=28.2

Q ss_pred             cEEE-EEecCCCCCCCCHHHHHHHHHHHhC-----CCcEEEEEcCCChhH
Q 041824          119 KVVI-YTTTLRGIRKTYEACKAAKSVIENF-----GVAVSERDVSMDRGF  162 (289)
Q Consensus       119 kVVV-YttSLrgvR~tC~~C~~ak~iL~~~-----gV~y~ErDVs~d~~~  162 (289)
                      -||| |+++      +|+.|+++..+|+..     ++.|-.+|++.+++.
T Consensus        22 ~vvv~F~a~------wC~~C~~~~p~~~~l~~~~~~~~~~~vd~d~~~~~   65 (105)
T d2ifqa1          22 LVVVDFSAT------WCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDV   65 (105)
T ss_dssp             CEEEEEECT------TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHH
T ss_pred             EEEEEEEcC------CccchhhhhhhhhhhccccccceeeecccccCHhH
Confidence            3555 6677      999999999888653     566778888876643

>d1b48a2 c.47.1.5 (A:2-79) Class alpha GST {Mouse (Mus musculus), (a1-4) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Mouse (Mus musculus), (a1-4) [TaxId: 10090]

Probab=93.53  E-value=0.03  Score=39.61  Aligned_cols=72  Identities=15%  Similarity=0.185  Sum_probs=47.8

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      |.++|.-.      .-..|+.+|.+|+..||+|+++.++..... ++.. .....                    ....|
T Consensus         3 K~kL~yf~------~~~~~~~vR~~L~~~gi~ye~~~~~~~~~~-~~~~-~~~~~--------------------p~g~l   54 (78)
T d1b48a2           3 KPKLYYFN------GRGRMESIRWLLAAAGVEFEEEFLETREQY-EKMQ-KDGHL--------------------LFGQV   54 (78)
T ss_dssp             CCEEEBCS------SCTTTHHHHHHHHHHTCCCCCCBCCCHHHH-HHHH-TTTCS--------------------SSSCS
T ss_pred             CcEEEEcC------CchHHHHHHHHHHHcCCCcEEEEEcchhhh-cchh-hcccc--------------------cCCCC
Confidence            45677666      347889999999999999998888753221 1111 11110                    11246


Q ss_pred             CEEEECCeEEechHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~  218 (289)
                      |.+.+||..|...-.+.+..
T Consensus        55 PvL~~~g~~l~eS~AI~rYL   74 (78)
T d1b48a2          55 PLVEIDGMMLTQTRAILSYL   74 (78)
T ss_dssp             CEEEETTEEECCHHHHHHHH
T ss_pred             CEEEeCCeEEECHHHHHHHH
Confidence            99999999998777766544

>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus tremula), thioredoxin H [TaxId: 113636]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: European aspen (Populus tremula), thioredoxin H [TaxId: 113636]

Probab=93.51  E-value=0.16  Score=37.54  Aligned_cols=38  Identities=21%  Similarity=0.402  Sum_probs=27.4

Q ss_pred             cEEE-EEecCCCCCCCCHHHHHHHHHHHh----C-CCcEEEEEcCCChhH
Q 041824          119 KVVI-YTTTLRGIRKTYEACKAAKSVIEN----F-GVAVSERDVSMDRGF  162 (289)
Q Consensus       119 kVVV-YttSLrgvR~tC~~C~~ak~iL~~----~-gV~y~ErDVs~d~~~  162 (289)
                      .||| |+++      +|+.|+.+...|+.    + ++.+-.+|++.+++.
T Consensus        28 ~vvv~F~a~------wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l   71 (113)
T d1ti3a_          28 LIVVDFTAS------WCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAV   71 (113)
T ss_dssp             EEEEEEECS------SCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHH
T ss_pred             EEEEEEEcC------ccccchhhhhhhhhhhccCCCceEEeeeeeccccc
Confidence            3444 6666      99999998877764    2 566778888877643

>d1nw2a_ c.47.1.1 (A:) Thioredoxin {Alicyclobacillus acidocaldarius, formerly Bacillus acidocaldarius [TaxId: 405212]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Alicyclobacillus acidocaldarius, formerly Bacillus acidocaldarius [TaxId: 405212]

Probab=93.48  E-value=0.14  Score=37.05  Aligned_cols=37  Identities=22%  Similarity=0.353  Sum_probs=28.3

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCChhH
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDRGF  162 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~~~  162 (289)
                      ||.|+++      +|+.|+.+...|+..      .+.+-.+|++.++..
T Consensus        21 vv~F~a~------wC~~C~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~   63 (105)
T d1nw2a_          21 LVDFWAA------WCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPET   63 (105)
T ss_dssp             EEEEECT------TCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHH
T ss_pred             EEEEECC------CCCCcccccchhhhhhhhcCCceEEEEEECCCCccc
Confidence            4556666      999999998888753      488889999877544

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=93.42  E-value=0.021  Score=41.16  Aligned_cols=50  Identities=24%  Similarity=0.575  Sum_probs=34.5

Q ss_pred             CcccCCCCce------eEeCCCCCCcceeeeccCCCCccccccCCccCcCCcc---cCCCC
Q 041824          237 GVCQGCADVR------FFPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLV---LCPLC  288 (289)
Q Consensus       237 ~~C~~Cgg~r------fvpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLv---rCp~C  288 (289)
                      ..|..|.|.+      ...|..|+|+-++......  ......|+.||-.|.+   .|+.|
T Consensus        12 ~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~~~g~--~~~~~~C~~C~G~G~~i~~~C~~C   70 (79)
T d1exka_          12 EECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGF--FAVQQTCPHCQGRGTLIKDPCNKC   70 (79)
T ss_dssp             EECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETT--EEEEEECTTTTTSSEECSSBCGGG
T ss_pred             ccCCCCcCcccCCCccceeCCCccceeEEEEeccc--ceeeEECcccCcceeECCCCCCCC
Confidence            4688887654      4779999999877654321  1234578888888866   67776

>d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like protein, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.38  E-value=0.13  Score=37.96  Aligned_cols=36  Identities=19%  Similarity=0.346  Sum_probs=27.9

Q ss_pred             EEE-EEecCCCCCCCCHHHHHHHHHHHh----C-CCcEEEEEcCCChh
Q 041824          120 VVI-YTTTLRGIRKTYEACKAAKSVIEN----F-GVAVSERDVSMDRG  161 (289)
Q Consensus       120 VVV-YttSLrgvR~tC~~C~~ak~iL~~----~-gV~y~ErDVs~d~~  161 (289)
                      ||| |+++      +|+.|+++...|+.    + ++.|-.+|++.+++
T Consensus        24 vvv~F~a~------wC~~Ck~~~p~~~~la~~~~~~~f~~vd~d~~~~   65 (107)
T d1gh2a_          24 AVVKFTMR------GCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQG   65 (107)
T ss_dssp             EEEEEECS------SCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHH
T ss_pred             EEEEEECC------CCCCccccchhhhccccccccccccccccccchh
Confidence            454 7777      99999998888753    3 68888999987654

>d1xwaa_ c.47.1.1 (A:) Thioredoxin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.15  E-value=0.3  Score=35.65  Aligned_cols=35  Identities=26%  Similarity=0.337  Sum_probs=24.4

Q ss_pred             EEE-EEecCCCCCCCCHHHHHHHHHHHhC----C--CcEEEEEcCCCh
Q 041824          120 VVI-YTTTLRGIRKTYEACKAAKSVIENF----G--VAVSERDVSMDR  160 (289)
Q Consensus       120 VVV-YttSLrgvR~tC~~C~~ak~iL~~~----g--V~y~ErDVs~d~  160 (289)
                      |+| |+++      +|+.|++.+..|+..    +  +.+..+|++.++
T Consensus        28 vlv~f~a~------wC~~C~~~~p~~~~l~~~~~~~~~~~~i~~d~~~   69 (111)
T d1xwaa_          28 VVLDFFAT------WCGPCKMISPKLVELSTQFADNVVVLKVDVDECE   69 (111)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH
T ss_pred             EEEEEECC------cccCccccchhHHHHhhhcccceEEEEEEeecCc
Confidence            444 7777      999999998888653    3  445566766554

>d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Escherichia coli [TaxId: 562]

Probab=92.86  E-value=0.27  Score=35.49  Aligned_cols=38  Identities=11%  Similarity=0.448  Sum_probs=25.2

Q ss_pred             CcEEE-EEecCCCCCCCCHHHHHHHHHHHh----CC--CcEEEEEcCCChh
Q 041824          118 NKVVI-YTTTLRGIRKTYEACKAAKSVIEN----FG--VAVSERDVSMDRG  161 (289)
Q Consensus       118 ~kVVV-YttSLrgvR~tC~~C~~ak~iL~~----~g--V~y~ErDVs~d~~  161 (289)
                      +.|+| |+++      +|++|+.+...+..    ++  +.+..+|++.++.
T Consensus        21 ~~v~v~F~a~------wC~~C~~~~~~~~~~a~~~~~~~~~~~vd~d~~~~   65 (108)
T d2trxa_          21 GAILVDFWAE------WCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG   65 (108)
T ss_dssp             SEEEEEEECT------TCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTT
T ss_pred             CcEEEEEECC------CCCCccccCcHHHHHHHHhhcceeeeeccccchhh
Confidence            34555 5566      99999988877753    33  3456778876643

>d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea), thioredoxin M [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Spinach (Spinacia oleracea), thioredoxin M [TaxId: 3562]

Probab=92.80  E-value=0.67  Score=32.98  Aligned_cols=38  Identities=21%  Similarity=0.324  Sum_probs=25.9

Q ss_pred             CCcEEE-EEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCCh
Q 041824          117 ENKVVI-YTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDR  160 (289)
Q Consensus       117 ~~kVVV-YttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~  160 (289)
                      .+.|+| |+++      +|+.|++++..|...      .+.+-.+|++.++
T Consensus        17 ~~~vlv~F~a~------wC~~C~~~~~~~~~l~~~~~~~~~~~~v~~d~~~   61 (104)
T d1fb6a_          17 EVPVMVDFWAP------WCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP   61 (104)
T ss_dssp             SSCEEEEEECT------TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH
T ss_pred             CCcEEEEEEcC------ccCCccccCchhHHHHHhhcCccceeEEecccch
Confidence            344655 5666      999999998887653      2446667777664

>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein Bta {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Bacterocin transport accessory protein Bta
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=92.42  E-value=0.2  Score=36.93  Aligned_cols=27  Identities=7%  Similarity=0.049  Sum_probs=20.6

Q ss_pred             CCHHHHHHHHHHHh----CCCcEEEEEcCCC
Q 041824          133 TYEACKAAKSVIEN----FGVAVSERDVSMD  159 (289)
Q Consensus       133 tC~~C~~ak~iL~~----~gV~y~ErDVs~d  159 (289)
                      +|++|+++...|+.    ++..+..+|+...
T Consensus        37 ~C~~C~~~~p~l~~~~~~~~~~v~~v~~~~~   67 (115)
T d1zmaa1          37 TCPYCRKFAGTLSGVVAETKAHIYFINSEEP   67 (115)
T ss_dssp             TCHHHHHHHHHHHHHHHHHCCCCEEEETTCG
T ss_pred             CCccHHHHHHHHHHHHHHhhhhhhhheeecc
Confidence            99999998877754    5666777788643

>d1m0ua2 c.47.1.5 (A:47-122) Class sigma GST {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class sigma GST
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.81  E-value=0.44  Score=33.35  Aligned_cols=70  Identities=13%  Similarity=0.170  Sum_probs=48.6

Q ss_pred             CcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          118 NKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       118 ~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      +...||.-+++      ..+..+|.+|...||+|+++.++.+.  ..+.+....              +         ..
T Consensus         2 ~s~kL~Yf~~~------g~~e~iRl~L~~~gi~yed~~~~~~~--~~~~~~~~p--------------~---------g~   50 (76)
T d1m0ua2           2 HSYTLFYFNVK------ALAEPLRYLFAYGNQEYEDVRVTRDE--WPALKPTMP--------------M---------GQ   50 (76)
T ss_dssp             CCEEEEEESSS------GGGHHHHHHHHHHTCCCEEEEECTTT--HHHHGGGSG--------------G---------GC
T ss_pred             ccEEEEecCCc------hHHHHHHHHHHHcCCCCEEecCChhh--hhhhhccCc--------------C---------CC
Confidence            34566666633      57789999999999999998887542  223222111              1         23


Q ss_pred             CCEEEECCeEEechHHHHHHH
Q 041824          198 LPRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       198 LPqIFI~G~~IGG~del~~L~  218 (289)
                      ||.+.+||..|.....+.+..
T Consensus        51 lP~l~~~g~~l~qS~aI~~YL   71 (76)
T d1m0ua2          51 MPVLEVDGKRVHQSISMARFL   71 (76)
T ss_dssp             SCEEEETTEEEECHHHHHHHH
T ss_pred             CcEEEECCcccccHHHHHHHH
Confidence            499999999999888776654

>d1k3ya2 c.47.1.5 (A:2-80) Class alpha GST {Human (Homo sapiens), (a1-1) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Human (Homo sapiens), (a1-1) [TaxId: 9606]

Probab=91.65  E-value=0.33  Score=34.12  Aligned_cols=72  Identities=15%  Similarity=0.166  Sum_probs=47.3

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      |.++|.=.++      ..++.+|.+|...||+|+++.+..... ..+.... ...                    ....|
T Consensus         3 k~kL~Yf~~~------grae~irl~L~~~gv~yed~~~~~~~~-~~~~~~~-~~~--------------------p~g~l   54 (79)
T d1k3ya2           3 KPKLHYFNAR------GRMESTRWLLAAAGVEFEEKFIKSAED-LDKLRND-GYL--------------------MFQQV   54 (79)
T ss_dssp             CCEEEEESSS------TTTHHHHHHHHHHTCCCEEEEECSHHH-HHHHHHT-TCC--------------------TTSCS
T ss_pred             CcEEEEcCCc------HHHHHHHHHHHHcCCCceEEEecchhh-hhhhccc-ccC--------------------CCCCC
Confidence            3455555533      678899999999999999988875322 1222211 110                    12345


Q ss_pred             CEEEECCeEEechHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~  218 (289)
                      |.+.+||..|...-.+.+..
T Consensus        55 Pvl~~~g~~l~qS~AI~~YL   74 (79)
T d1k3ya2          55 PMVEIDGMKLVQTRAILNYI   74 (79)
T ss_dssp             CEEEETTEEEESHHHHHHHH
T ss_pred             CEEEECCeEEEcHHHHHHHH
Confidence            99999999998877776654

>d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: spliceosomal protein U5-15Kd
domain: spliceosomal protein U5-15Kd
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.04  E-value=0.17  Score=39.47  Aligned_cols=37  Identities=16%  Similarity=0.152  Sum_probs=28.5

Q ss_pred             cEEE-EEecCCCCCCCCHHHHHHHHHHHhC------CCcEEEEEcCCChh
Q 041824          119 KVVI-YTTTLRGIRKTYEACKAAKSVIENF------GVAVSERDVSMDRG  161 (289)
Q Consensus       119 kVVV-YttSLrgvR~tC~~C~~ak~iL~~~------gV~y~ErDVs~d~~  161 (289)
                      -||| |+++      ||+.|+++..+|+..      .+.|-.+|++..++
T Consensus        24 ~vvv~F~a~------wC~~C~~~~p~l~~la~~~~~~v~~~~VDvd~~~~   67 (137)
T d1qgva_          24 VVVIRFGHD------WDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPD   67 (137)
T ss_dssp             EEEEEEECT------TSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT
T ss_pred             EEEEEEECC------CCccchhcChHHHHHHHHhhccceEEEeeccccch
Confidence            3455 6667      999999999998764      36788899987764

>d1duga2 c.47.1.5 (A:1-80) Class alpha GST {Schistosoma japonicum [TaxId: 6182]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Schistosoma japonicum [TaxId: 6182]

Probab=90.23  E-value=0.54  Score=32.85  Aligned_cols=71  Identities=14%  Similarity=0.146  Sum_probs=47.0

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHH-HHcccccccCCCCCcchhhccCCCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRE-LMMRRRRRSSSSNNNEEEAESSVQPLPPVL  198 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~-llg~~~~~~~~s~~~~~~g~~t~~~tv~~L  198 (289)
                      |..|. +++      ..++.+|.+|+..||+|+++.++.....  +.+. .....         +          ....|
T Consensus         3 ~L~Y~-~~r------grae~vRl~L~~~gi~ye~~~~~~~~~~--~~~~~~~~~~---------~----------p~~~l   54 (80)
T d1duga2           3 ILGYW-KIK------GLVQPTRLLLEYLEEKYEEHLYERDEGD--KWRNKKFELG---------L----------EFPNL   54 (80)
T ss_dssp             EEEEE-SSS------GGGHHHHHHHHHHTCCCEEEEECTTCHH--HHHHHTTSSC---------C----------SSCCS
T ss_pred             EEEEc-CCc------hhhHHHHHHHHHcCCCceEEEEeccccc--ccchhhhhcc---------C----------CCccc
Confidence            56666 323      6788899999999999999998875422  2221 11110         0          12356


Q ss_pred             CEEEECCeEEechHHHHHHH
Q 041824          199 PRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       199 PqIFI~G~~IGG~del~~L~  218 (289)
                      |.+..||..|.....+.+..
T Consensus        55 P~l~d~g~~l~qS~AI~ryL   74 (80)
T d1duga2          55 PYYIDGDVKLTQSMAIIRYI   74 (80)
T ss_dssp             SEEECSSCEEESHHHHHHHH
T ss_pred             ceeccCCeeehhHHHHHHHH
Confidence            99999999988877776543

>d1z6ma1 c.47.1.13 (A:1-172) Hypothetical protein EF0770 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: DsbA-like
domain: Hypothetical protein EF0770
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.86  E-value=0.64  Score=35.36  Aligned_cols=38  Identities=11%  Similarity=0.067  Sum_probs=25.0

Q ss_pred             CCCCCcEEEEEecCCCCCCCCHHHHHHHHHHHh----C----CCcEEEEEcC
Q 041824          114 PDGENKVVIYTTTLRGIRKTYEACKAAKSVIEN----F----GVAVSERDVS  157 (289)
Q Consensus       114 p~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~----~----gV~y~ErDVs  157 (289)
                      |..+-.|++|+.-      .||+|.+.-..+..    +    .+.+..+.+.
T Consensus        22 ~~a~v~I~ef~d~------~Cp~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (172)
T d1z6ma1          22 SNAPVKMIEFINV------RCPYCRKWFEESEELLAQSVKSGKVERIIKLFD   67 (172)
T ss_dssp             TTCSEEEEEEECT------TCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred             CCCCEEEEEEECC------CCHhHHHHHHHHhhhhhhhccccceeeeecccc
Confidence            3445568889999      99999876655543    2    3445555654

>d1tu7a2 c.47.1.5 (A:1-77) Class pi GST {Onchocerca volvulus [TaxId: 6282]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class pi GST
species: Onchocerca volvulus [TaxId: 6282]

Probab=89.54  E-value=0.41  Score=33.47  Aligned_cols=61  Identities=8%  Similarity=0.141  Sum_probs=43.3

Q ss_pred             CCHHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEEEECCeEEechH
Q 041824          133 TYEACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAE  212 (289)
Q Consensus       133 tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI~G~~IGG~d  212 (289)
                      .-..|+.+|-+|...||+|+++.+..+.  ..+++...                       ....||.+.+||..|....
T Consensus        10 ~~g~~e~iRl~L~~~gi~~e~~~~~~~~--~~~~~~~~-----------------------p~g~lPvL~~~~~~l~qS~   64 (77)
T d1tu7a2          10 IRGLAEPIRLFLVDQDIKFIDDRIAKDD--FSSIKSQF-----------------------QFGQLPCLYDGDQQIVQSG   64 (77)
T ss_dssp             SSGGGHHHHHHHHHTTCCCEEEEECGGG--STTTGGGS-----------------------TTSCSCEEEETTEEEESHH
T ss_pred             CcHHHHHHHHHHHHcCCCceeeeccccc--chhhcccC-----------------------CCCCCCEEEECCEEEEcHH
Confidence            4478999999999999999988876432  11111110                       1134599999999999888


Q ss_pred             HHHHHH
Q 041824          213 EVLRIV  218 (289)
Q Consensus       213 el~~L~  218 (289)
                      .+.+..
T Consensus        65 AI~~YL   70 (77)
T d1tu7a2          65 AILRHL   70 (77)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            877654

>d2c4ja2 c.47.1.5 (A:2-85) Class mu GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class mu GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.24  E-value=1.2  Score=31.04  Aligned_cols=75  Identities=11%  Similarity=0.119  Sum_probs=48.3

Q ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChhH---HHHHHHHHcccccccCCCCCcchhhccCCCCCCC
Q 041824          120 VVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRGF---KEELRELMMRRRRRSSSSNNNEEEAESSVQPLPP  196 (289)
Q Consensus       120 VVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~~---reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~  196 (289)
                      +++|.-.+      -..++.+|.+|...||+|+.+.++++...   ..+....-...                  .....
T Consensus         2 ~~L~Y~~~------~g~~~~vR~~L~~~gi~ye~~~~~~~~~~~~~~~~~~~~~~~~------------------~~p~~   57 (84)
T d2c4ja2           2 MTLGYWNI------RGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKL------------------GLDFP   57 (84)
T ss_dssp             EEEEEESS------SGGGHHHHHHHHHTTCCEEEEEECCCCTTTTCCHHHHTTTTSS------------------CCSSC
T ss_pred             EEEEECCC------chhhHHHHHHHHHcCCCceEEEEccccccccchHHHhhhhhhc------------------cCCCC
Confidence            55655563      36889999999999999999999865321   11221110000                  00123


Q ss_pred             CCCEEEECCeEEechHHHHHHH
Q 041824          197 VLPRVFVKGRYVGGAEEVLRIV  218 (289)
Q Consensus       197 ~LPqIFI~G~~IGG~del~~L~  218 (289)
                      .||.+-.+|..|...-.+.+..
T Consensus        58 ~lP~L~~~g~~l~eS~AIl~YL   79 (84)
T d2c4ja2          58 NLPYLIDGTHKITQSNAILRYI   79 (84)
T ss_dssp             CSSEEEETTEEEESHHHHHHHH
T ss_pred             CCCEEEECCEEEecHHHHHHHH
Confidence            5699999999998877776543

>d1tw9a2 c.47.1.5 (A:1-77) Class sigma GST {Heligmosomoides polygyrus [TaxId: 6339]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class sigma GST
species: Heligmosomoides polygyrus [TaxId: 6339]

Probab=88.71  E-value=0.95  Score=31.53  Aligned_cols=59  Identities=14%  Similarity=0.132  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHHHcccccccCCCCCcchhhccCCCCCCCCCCEEEECCeEEechHHH
Q 041824          135 EACKAAKSVIENFGVAVSERDVSMDRGFKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEEV  214 (289)
Q Consensus       135 ~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI~G~~IGG~del  214 (289)
                      ..++.+|.+|...||+|+++.+..+.  ..+.+   ...                    ....||.+.+||..|.....+
T Consensus        13 gr~e~vR~~L~~~gi~ye~~~~~~~~--~~~~~---~~~--------------------p~g~lPvL~~~g~~i~qS~AI   67 (77)
T d1tw9a2          13 GAGECARQVFALADQKYEDVRLTQET--FVPLK---ATF--------------------PFGQVPVLEVDGQQLAQSQAI   67 (77)
T ss_dssp             GGGHHHHHHHHHTTCCCEEEEECHHH--HGGGG---GGS--------------------TTSCSCEEEETTEEEECHHHH
T ss_pred             hHHHHHHHHHHHcCCCceeeeccccc--chhhh---hhc--------------------ccCCCCEEEECCEEEEcHHHH
Confidence            68999999999999999998886321  11111   110                    112459999999999887777


Q ss_pred             HHHH
Q 041824          215 LRIV  218 (289)
Q Consensus       215 ~~L~  218 (289)
                      .+..
T Consensus        68 ~~yL   71 (77)
T d1tw9a2          68 CRYL   71 (77)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6543

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=88.39  E-value=0.15  Score=36.37  Aligned_cols=38  Identities=26%  Similarity=0.614  Sum_probs=30.4

Q ss_pred             CcccCCCCceeE-----------eCCCCCCcceeeeccCCCCccccccCCccCcCCccc
Q 041824          237 GVCQGCADVRFF-----------PCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVL  284 (289)
Q Consensus       237 ~~C~~Cgg~rfv-----------pC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLvr  284 (289)
                      ..|..|.|.+.+           +|+.|+|+-+++.          -+|..|+-+|.|+
T Consensus        29 ~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i~----------~~C~~C~G~G~v~   77 (79)
T d1exka_          29 QTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIK----------DPCNKCHGHGRVE   77 (79)
T ss_dssp             EECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECS----------SBCGGGTTSSEEE
T ss_pred             eeCCCccceeEEEEecccceeeEECcccCcceeECC----------CCCCCCCCceEee
Confidence            469999988753           6999999977741          2799999999874

>d2b5ea4 c.47.1.2 (A:23-141) Protein disulfide isomerase, PDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: PDI-like
domain: Protein disulfide isomerase, PDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.40  E-value=1.1  Score=32.94  Aligned_cols=36  Identities=8%  Similarity=0.154  Sum_probs=26.5

Q ss_pred             cEEEEEecCCCCCCCCHHHHHHHHHHHh-------CCCcEEEEEcCCCh
Q 041824          119 KVVIYTTTLRGIRKTYEACKAAKSVIEN-------FGVAVSERDVSMDR  160 (289)
Q Consensus       119 kVVVYttSLrgvR~tC~~C~~ak~iL~~-------~gV~y~ErDVs~d~  160 (289)
                      -+|.|+++      +|+.|+++...++.       .+|.+-.+|++.+.
T Consensus        30 ~lV~fya~------wC~~C~~~~~~~~~la~~~~~~~v~~~~vd~~~~~   72 (119)
T d2b5ea4          30 VLAEFFAP------WCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQ   72 (119)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCH
T ss_pred             EEEEEECC------ccCcccccchhhhhhhhhhcccceeeeeeeccchH
Confidence            46666666      99999998776654       24778889988654

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.24  E-value=0.21  Score=35.25  Aligned_cols=40  Identities=23%  Similarity=0.530  Sum_probs=31.1

Q ss_pred             CcccCCCCcee---------------EeCCCCCCcceeeeccCCCCccccccCCccCcCCccc
Q 041824          237 GVCQGCADVRF---------------FPCFRCNGSCKLVINMQPRGKTAALRCPDCNENGLVL  284 (289)
Q Consensus       237 ~~C~~Cgg~rf---------------vpC~~C~GS~K~~~~~~~~g~~~~~rC~~CNENGLvr  284 (289)
                      ..|..|.|.++               .+|+.|+|+-+++..+        -+|..|+-.|.|+
T Consensus        19 ~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~--------~~C~~C~G~g~v~   73 (74)
T d1nlta3          19 KKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPK--------DRCKSCNGKKVEN   73 (74)
T ss_dssp             CCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTT--------SBCSSSTTSCEEE
T ss_pred             CCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCCC--------CCCCCCCCeeEeC
Confidence            46999998764               4699999997776542        3799999988774

>d1xg8a_ c.47.1.17 (A:) Hypothetical protein SA0798 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: YuzD-like
domain: Hypothetical protein SA0798
species: Staphylococcus aureus [TaxId: 1280]

Probab=86.89  E-value=0.7  Score=35.56  Aligned_cols=76  Identities=18%  Similarity=0.312  Sum_probs=46.8

Q ss_pred             CCcEEEEEecCCCCCCCCHHH------HHHHHHHHh--------CCCcEEEEEcCCChh----HHHHHHHHHcccccccC
Q 041824          117 ENKVVIYTTTLRGIRKTYEAC------KAAKSVIEN--------FGVAVSERDVSMDRG----FKEELRELMMRRRRRSS  178 (289)
Q Consensus       117 ~~kVVVYttSLrgvR~tC~~C------~~ak~iL~~--------~gV~y~ErDVs~d~~----~reEL~~llg~~~~~~~  178 (289)
                      ...|+||...     ..|.-|      +..-.+|+.        ....|.++||..+++    ..+++.++.-..     
T Consensus         7 ~v~i~VYGA~-----~iCASCV~aPSSkeTyEWLqaal~RKyp~~~f~~~YiDi~~~~~~~~~~~~~~ae~I~ed-----   76 (111)
T d1xg8a_           7 SNAVVVYGAD-----VICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQD-----   76 (111)
T ss_dssp             CEEEEEEECS-----SCCGGGSSSCCHHHHHHHHHHHHHHHCTTSCEEEEEEETTTC---CCHHHHHHHHHHHTT-----
T ss_pred             eeEEEEEccc-----ccchhhcCCCCchhHHHHHHHHHhCcCCCCceEEEEEeccCCcccccHHHHHHHHHHhhc-----
Confidence            3468999987     467766      345555543        245578999976553    344555554332     


Q ss_pred             CCCCcchhhccCCCCCCCCCCEEEECCeEEe-chHHHHHHH
Q 041824          179 SSNNNEEEAESSVQPLPPVLPRVFVKGRYVG-GAEEVLRIV  218 (289)
Q Consensus       179 ~s~~~~~~g~~t~~~tv~~LPqIFI~G~~IG-G~del~~L~  218 (289)
                                   .   .-.|.|.|+|++|| |.-.|+...
T Consensus        77 -------------e---~FYPlV~i~~eiVaEGnp~LK~I~  101 (111)
T d1xg8a_          77 -------------E---LFYPLITMNDEYVADGYIQTKQIT  101 (111)
T ss_dssp             -------------S---SCSSEEEETTEEEEESSCCHHHHH
T ss_pred             -------------c---ceeeEEEECCEEeecCCccHHHHH
Confidence                         1   12499999999998 555555443

>d1n2aa2 c.47.1.5 (A:1-80) Class beta GST {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class beta GST
species: Escherichia coli [TaxId: 562]

Probab=86.69  E-value=0.18  Score=35.51  Aligned_cols=69  Identities=7%  Similarity=0.149  Sum_probs=42.9

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCChh---HHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDRG---FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~~---~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .+|...     .+|  +.+++.+|+.+|++|+.+.|.....   ..+++.++..                    ...+  
T Consensus         2 kLY~~p-----~s~--s~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~~nP--------------------~g~v--   52 (80)
T d1n2aa2           2 KLFYKP-----GAC--SLASHITLRESGKDFTLVSVDLMKKRLENGDDYFAVNP--------------------KGQV--   52 (80)
T ss_dssp             EEEECT-----TST--THHHHHHHHHTTCCCEEEEEETTTTEETTCCBGGGTCT--------------------TCCS--
T ss_pred             EEEeCC-----Ccc--HHHHHHHHHHhCCCCEEEEEcCCCCcccCCHHHHHHhc--------------------ccce--
Confidence            367665     133  5799999999999999877753221   1122222211                    1134  


Q ss_pred             CCEEEE-CCeEEechHHHHHHHH
Q 041824          198 LPRVFV-KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI-~G~~IGG~del~~L~E  219 (289)
                       |.+.. ||..|-....+.+..+
T Consensus        53 -P~L~~~dg~~l~ES~aI~~yL~   74 (80)
T d1n2aa2          53 -PALLLDDGTLLTEGVAIMQYLA   74 (80)
T ss_dssp             -CEEECTTSCEEESHHHHHHHHH
T ss_pred             -eeEEecCCCEEcCHHHHHHHHH
Confidence             99987 5688888777776554

>d2fnoa2 c.47.1.5 (A:1-87) Hypothetical protein AGR_pAT_752p/Atu5508 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Hypothetical protein AGR pAT 752p/Atu5508
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=86.32  E-value=0.25  Score=35.48  Aligned_cols=37  Identities=22%  Similarity=0.338  Sum_probs=31.3

Q ss_pred             CCCCcEEEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcC
Q 041824          115 DGENKVVIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVS  157 (289)
Q Consensus       115 ~~~~kVVVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs  157 (289)
                      .+++.+.+|.-.++      ..+..+|-+|...||+|+++.++
T Consensus         3 ~~M~~~~L~Y~~~~------g~~e~vRl~L~~~g~~ye~~~~~   39 (87)
T d2fnoa2           3 DGMNTFDLYYWPVP------FRGQLIRGILAHCGCSWDEHDVD   39 (87)
T ss_dssp             TSCBSEEEECCSSS------STTHHHHHHHHHTTCCEECCCHH
T ss_pred             CCCCCeEEEECCCC------cchHHHHHHHHHHhCcceeeccc
Confidence            56788999998844      67899999999999999987765

>d2fwha1 c.47.1.1 (A:428-544) Thiol:disulfide interchange protein DsbD, C-terminal domain (DsbD-gamma) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thiol:disulfide interchange protein DsbD, C-terminal domain (DsbD-gamma)
species: Escherichia coli [TaxId: 562]

Probab=85.74  E-value=1  Score=32.43  Aligned_cols=48  Identities=13%  Similarity=0.160  Sum_probs=31.0

Q ss_pred             cEEE-EEecCCCCCCCCHHHHHHHHHH-------HhC-CCcEEEEEcCCChhHHHHHHHHHcc
Q 041824          119 KVVI-YTTTLRGIRKTYEACKAAKSVI-------ENF-GVAVSERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       119 kVVV-YttSLrgvR~tC~~C~~ak~iL-------~~~-gV~y~ErDVs~d~~~reEL~~llg~  172 (289)
                      .|+| |..+      +|++|++....+       +.. .+.+..+|+..+...-.+|.+..+.
T Consensus        24 ~vlv~F~a~------wC~~C~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v   80 (117)
T d2fwha1          24 PVMLDLYAD------WCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNV   80 (117)
T ss_dssp             CEEEEEECT------TCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTC
T ss_pred             eEEEEEecc------cCCcccccchhHHhHHHHHHhccceEEEecccccchhHHHHHHhhheh
Confidence            3555 5555      999999976543       222 4556778887776656666665553

>d1fhea2 c.47.1.5 (A:1-80) Class alpha GST {Fasciola hepatica [TaxId: 6192]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Fasciola hepatica [TaxId: 6192]

Probab=84.23  E-value=1.3  Score=30.80  Aligned_cols=62  Identities=15%  Similarity=0.098  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHHhCCCcEEEEEcCCChhHHHHHHHH-HcccccccCCCCCcchhhccCCCCCCCCCCEEEECCeEEechHH
Q 041824          135 EACKAAKSVIENFGVAVSERDVSMDRGFKEELREL-MMRRRRRSSSSNNNEEEAESSVQPLPPVLPRVFVKGRYVGGAEE  213 (289)
Q Consensus       135 ~~C~~ak~iL~~~gV~y~ErDVs~d~~~reEL~~l-lg~~~~~~~~s~~~~~~g~~t~~~tv~~LPqIFI~G~~IGG~de  213 (289)
                      ..++.+|.+|...||+|+++.++++..  ++..+. ....                  . ....+|.+..+|..|...-.
T Consensus        11 grae~iRl~L~~~gv~ye~~~~~~~~~--~~~~~~~~~~~------------------~-p~~~~P~l~~~g~~l~qS~A   69 (80)
T d1fhea2          11 GLAQPVRLFLEYLGEEYEEHLYGRDDR--EKWMSEKFNMG------------------L-DLPNLPYYIDDKCKLTQSVA   69 (80)
T ss_dssp             TTTHHHHHHHHHTTCCCEEEEECSTTS--HHHHTTTTTSC------------------C-SSCCSSEEECSSCEEESTTH
T ss_pred             hHHHHHHHHHHHcCCCCEEEEeccccc--hhcchhhhhcc------------------C-CCcceeeeecCCeEEeCHHH
Confidence            467899999999999999999987532  222221 1100                  0 12355999888888876666


Q ss_pred             HHHH
Q 041824          214 VLRI  217 (289)
Q Consensus       214 l~~L  217 (289)
                      +.+.
T Consensus        70 I~~y   73 (80)
T d1fhea2          70 IMRY   73 (80)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5554

>d1f2ea2 c.47.1.5 (A:1-80) Class beta GST {Sphingomonas paucimobilis [TaxId: 13689]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class beta GST
species: Sphingomonas paucimobilis [TaxId: 13689]

Probab=83.05  E-value=0.54  Score=32.92  Aligned_cols=69  Identities=10%  Similarity=0.171  Sum_probs=45.3

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCC--hh-HHHHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMD--RG-FKEELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d--~~-~reEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      .+|.+.     ..|  ..+++-+|+.+||+|+.+.|...  .. ..+++.++...                    .++  
T Consensus         2 kLY~~p-----~s~--s~~v~~~L~e~gi~~e~~~v~~~~~~~~~~~~~~~~nP~--------------------g~v--   52 (80)
T d1f2ea2           2 KLFISP-----GAC--SLAPHIALRETGADFEAVKVDLAVRKTEAGEDFLTVNPS--------------------GKV--   52 (80)
T ss_dssp             EEEECT-----TST--THHHHHHHHHHTCCCEEEEEETTTTEETTSCBHHHHCTT--------------------CCS--
T ss_pred             EEecCC-----Cch--HHHHHHHHHHcCCCCEEEEEecCCCcccCCHHHHHHhhc--------------------ccc--
Confidence            367665     134  47899999999999988777542  11 22345554321                    134  


Q ss_pred             CCEEEE-CCeEEechHHHHHHHH
Q 041824          198 LPRVFV-KGRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI-~G~~IGG~del~~L~E  219 (289)
                       |.+.+ ||..|.....+.+..+
T Consensus        53 -P~L~~d~g~~l~ES~aI~~yL~   74 (80)
T d1f2ea2          53 -PALTLDSGETLTENPAILLYIA   74 (80)
T ss_dssp             -CEEECTTSCEEESHHHHHHHHH
T ss_pred             -ceEEECCCeEEecHHHHHHHHH
Confidence             99987 5788888877776654

>d1knga_ c.47.1.10 (A:) Thioredoxin-like protein CcmG (CycY, DsbE) {Bradyrhizobium japonicum [TaxId: 375]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione peroxidase-like
domain: Thioredoxin-like protein CcmG (CycY, DsbE)
species: Bradyrhizobium japonicum [TaxId: 375]

Probab=82.97  E-value=6.7  Score=28.89  Aligned_cols=46  Identities=2%  Similarity=-0.041  Sum_probs=28.7

Q ss_pred             EEE-EEecCCCCCCCCHHHHHHHHHHHh----CCCcEEEEEcCCChhHHHHHHHHHc
Q 041824          120 VVI-YTTTLRGIRKTYEACKAAKSVIEN----FGVAVSERDVSMDRGFKEELRELMM  171 (289)
Q Consensus       120 VVV-YttSLrgvR~tC~~C~~ak~iL~~----~gV~y~ErDVs~d~~~reEL~~llg  171 (289)
                      ||| |..+      +|+.|+..-..|+.    +++.+..+.+.......++..+..+
T Consensus        34 vll~fwa~------wC~~C~~~~p~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~   84 (144)
T d1knga_          34 SLVNVWAS------WCVPCHDEAPLLTELGKDKRFQLVGINYKDAADNARRFLGRYG   84 (144)
T ss_dssp             EEEEEECT------TCHHHHHHHHHHHHHTTCTTSEEEEEEESCCHHHHHHHHHHHC
T ss_pred             EEEEeecc------ccccccccCchhhhhhhccCceeEEEEeeechHHHHHHHHHcC
Confidence            455 5555      99999887766665    4566666666655554444444444

>d1pmta2 c.47.1.5 (A:1-80) Class beta GST {Proteus mirabilis [TaxId: 584]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class beta GST
species: Proteus mirabilis [TaxId: 584]

Probab=82.57  E-value=0.38  Score=33.70  Aligned_cols=69  Identities=10%  Similarity=0.174  Sum_probs=42.5

Q ss_pred             EEEEecCCCCCCCCHHHHHHHHHHHhCCCcEEEEEcCCCh--hHH-HHHHHHHcccccccCCCCCcchhhccCCCCCCCC
Q 041824          121 VIYTTTLRGIRKTYEACKAAKSVIENFGVAVSERDVSMDR--GFK-EELRELMMRRRRRSSSSNNNEEEAESSVQPLPPV  197 (289)
Q Consensus       121 VVYttSLrgvR~tC~~C~~ak~iL~~~gV~y~ErDVs~d~--~~r-eEL~~llg~~~~~~~~s~~~~~~g~~t~~~tv~~  197 (289)
                      -+|+...     .|  +.+|+.+|+.+||+|+.+.|+...  ..+ +++.++..                    ...+  
T Consensus         2 kLY~~p~-----s~--s~~vr~~L~e~gi~~e~~~v~~~~~~~~~~~~~~~~nP--------------------~g~v--   52 (80)
T d1pmta2           2 KLYYTPG-----SC--SLSPHIVLRETGLDFSIERIDLRTKKTESGKDFLAINP--------------------KGQV--   52 (80)
T ss_dssp             EEEECTT-----ST--THHHHHHHHHTTCCCEEEEEETTTTEETTSCBGGGTCT--------------------TCCS--
T ss_pred             EEEeCCC-----Ch--HHHHHHHHHHhCCCCEEEEEecCCCcccCCHHHHHhcc--------------------cccC--
Confidence            3676651     23  589999999999999977776431  111 12222211                    1244  


Q ss_pred             CCEEEEC-CeEEechHHHHHHHH
Q 041824          198 LPRVFVK-GRYVGGAEEVLRIVE  219 (289)
Q Consensus       198 LPqIFI~-G~~IGG~del~~L~E  219 (289)
                       |.+.++ |..|-....+.+..+
T Consensus        53 -P~L~~~~g~~l~ES~aI~~yL~   74 (80)
T d1pmta2          53 -PVLQLDNGDILTEGVAIVQYLA   74 (80)
T ss_dssp             -CEEECTTSCEEESHHHHHHHHH
T ss_pred             -CceecCCCcEEeCHHHHHHHHH
Confidence             999875 677877766666554

>d2es7a1 c.47.1.20 (A:7-125) Hydrogenase-1 operon protein HyaE {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: HyaE-like
domain: Hydrogenase-1 operon protein HyaE
species: Salmonella typhimurium [TaxId: 90371]

Probab=81.28  E-value=0.81  Score=34.36  Aligned_cols=36  Identities=8%  Similarity=0.051  Sum_probs=18.1

Q ss_pred             CCHHHHHHHHHHHhC-----CCcEE--EEEcCCChhHHHHHHHHHcc
Q 041824          133 TYEACKAAKSVIENF-----GVAVS--ERDVSMDRGFKEELRELMMR  172 (289)
Q Consensus       133 tC~~C~~ak~iL~~~-----gV~y~--ErDVs~d~~~reEL~~llg~  172 (289)
                      +|+.|+++.-+|.+.     ++++.  .+|++    .-.++.+..+.
T Consensus        41 wCp~C~~~~pvl~eL~~~~~~~~~~~~~Vd~d----~~~~l~~~~~V   83 (119)
T d2es7a1          41 RTPEVSDNPVMIAELLREFPQFDWQVAVADLE----QSEAIGDRFNV   83 (119)
T ss_dssp             C----CCHHHHHHHHHHTCTTSCCEEEEECHH----HHHHHHHTTTC
T ss_pred             CCccHHHHHHHHHHHHHhcCCCceEEEEEECC----CCHHHHHhcCc
Confidence            899999998888753     44444  45443    23455555443