Citrus Sinensis ID: 041825
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 391 | 2.2.26 [Sep-21-2011] | |||||||
| Q9URZ0 | 436 | Alpha-galactosidase mel1 | yes | no | 0.705 | 0.633 | 0.251 | 8e-19 | |
| Q42656 | 378 | Alpha-galactosidase OS=Co | N/A | no | 0.670 | 0.693 | 0.255 | 1e-18 | |
| P14749 | 411 | Alpha-galactosidase OS=Cy | N/A | no | 0.664 | 0.632 | 0.253 | 1e-18 | |
| A1D0A3 | 447 | Probable alpha-galactosid | N/A | no | 0.813 | 0.711 | 0.262 | 6e-16 | |
| Q4WE86 | 447 | Probable alpha-galactosid | yes | no | 0.815 | 0.713 | 0.247 | 2e-15 | |
| B0Y224 | 426 | Probable alpha-galactosid | N/A | no | 0.759 | 0.697 | 0.251 | 3e-15 | |
| B3PGJ1 | 404 | Alpha-galactosidase A OS= | yes | no | 0.739 | 0.715 | 0.230 | 4e-15 | |
| Q9FXT4 | 417 | Alpha-galactosidase OS=Or | no | no | 0.672 | 0.630 | 0.247 | 8e-15 | |
| O94221 | 435 | Probable alpha-galactosid | N/A | no | 0.800 | 0.719 | 0.254 | 8e-15 | |
| A2QEJ9 | 443 | Probable alpha-galactosid | yes | no | 0.749 | 0.661 | 0.245 | 2e-13 |
| >sp|Q9URZ0|AGAL_SCHPO Alpha-galactosidase mel1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mel1 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 151/378 (39%), Gaps = 102/378 (26%)
Query: 36 PPRGWNSYDAFCWIISEQEFLESADIVAKR-LLPHGYEYVVVDYLWYRKKVKGAHIDSEG 94
P GWNS++ + I E L +A + + LL GYEY+V+D W + +
Sbjct: 33 PQMGWNSWNKYACDIDESIILNNAKAIKEEGLLDLGYEYIVMDDCWSKHERNATT----- 87
Query: 95 IDLIDEWGRMVPDPERWPSSKGGKGFTEIAKKVHDIGLKFGIHVMKGISTQAVNANTLIY 154
GR+ +P+++P+ G +AKK+HD+G KFG+
Sbjct: 88 -------GRLEANPDKFPN-----GIGSMAKKLHDMGFKFGM------------------ 117
Query: 155 DYDKGGPYMEAGRQWRAQDIAIKEKPCAWMPHGFMAVNTKLGAGKAFLRSLHKQYADWGV 214
Y G Y AG P + + H + +T +ADWGV
Sbjct: 118 -YSSAGKYTCAGF------------PGS-LNHEQIDADT---------------FADWGV 148
Query: 215 DFVKHDCAFGDDLDEGEIAVVSEVFK------GQQNRPIIYSLSPGTSATPAMAQKINGL 268
D++K+D F + G + E +K + RPI YSL + N +
Sbjct: 149 DYLKYDNCFNEG-KSGVPLISYERYKRMSDALNKTGRPIFYSLCQW--GEDFVWNWGNTI 205
Query: 269 ANMYRVTGDDWDSWP--DVAA-------------HFSVARDFAAANMTGALGLKGKSWPD 313
AN +R++GD +D++ DV H SV + A+ + W D
Sbjct: 206 ANSWRISGDIFDTFSRKDVRCPCETIECFALQGDHCSVMNIISKASFLSSKAGMNSGWND 265
Query: 314 LDMLPLGWLTDANSTQGPYRACKLTQDEQKTQITLWAMAKSPLMFGGDVRKLDDTTYGLI 373
LD L +G ++ +E KT T+WA+ KSPL+ G DV + ++
Sbjct: 266 LDSLEVG-------------NGGMSFEEYKTHFTMWAILKSPLILGNDVSSMSPMDKLIV 312
Query: 374 TNPTLLEIDHHSSNNKEA 391
+N L+ I+ N A
Sbjct: 313 SNKELISINQDIGTNPAA 330
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 2 |
| >sp|Q42656|AGAL_COFAR Alpha-galactosidase OS=Coffea arabica PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|A1D0A3|AGALB_NEOFI Probable alpha-galactosidase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=aglB PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q4WE86|AGALB_ASPFU Probable alpha-galactosidase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=aglB PE=3 SV=2 | Back alignment and function description |
|---|
| >sp|B0Y224|AGALB_ASPFC Probable alpha-galactosidase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=aglB PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|B3PGJ1|AGAL_CELJU Alpha-galactosidase A OS=Cellvibrio japonicus (strain Ueda107) GN=agaA PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q9FXT4|AGAL_ORYSJ Alpha-galactosidase OS=Oryza sativa subsp. japonica GN=Os10g0493600 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|O94221|AGALB_PENSI Probable alpha-galactosidase B OS=Penicillium simplicissimum GN=agl1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|A2QEJ9|AGALB_ASPNC Probable alpha-galactosidase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=aglB PE=3 SV=1 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 391 | ||||||
| 296081370 | 1408 | unnamed protein product [Vitis vinifera] | 0.994 | 0.276 | 0.695 | 1e-166 | |
| 297814864 | 651 | glycosyl hydrolase family protein 27 [Ar | 0.976 | 0.586 | 0.697 | 1e-165 | |
| 225424633 | 647 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 0.601 | 0.695 | 1e-164 | |
| 255578361 | 640 | alpha-galactosidase/alpha-n-acetylgalact | 0.974 | 0.595 | 0.685 | 1e-162 | |
| 9294296 | 676 | unnamed protein product [Arabidopsis tha | 0.969 | 0.560 | 0.689 | 1e-162 | |
| 30688284 | 647 | Melibiase family protein [Arabidopsis th | 0.969 | 0.585 | 0.689 | 1e-162 | |
| 356540239 | 656 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 0.592 | 0.683 | 1e-161 | |
| 224107747 | 649 | predicted protein [Populus trichocarpa] | 0.938 | 0.565 | 0.713 | 1e-161 | |
| 356512659 | 640 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 0.607 | 0.676 | 1e-160 | |
| 356525431 | 635 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 0.612 | 0.676 | 1e-160 |
| >gi|296081370|emb|CBI16803.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 272/391 (69%), Positives = 321/391 (82%), Gaps = 2/391 (0%)
Query: 1 MKFFALS-ILCFFSSLLLHRIPSANAADKETEHAALPPRGWNSYDAFCWIISEQEFLESA 59
M F LS + FFS + R+ + + E +HA PPRGWNSYD+F WIISE+EFL+SA
Sbjct: 1 MNFAVLSSLFIFFSLVCFQRLSAKPLSKNEGKHAWFPPRGWNSYDSFSWIISEEEFLKSA 60
Query: 60 DIVAKRLLPHGYEYVVVDYLWYRKKVKGAHIDSEGIDLIDEWGRMVPDPERWPSSKGGKG 119
+IV++RL P GYEYVV+DYLWYR+KV+GA+ DS G D+ID+WGRM PDP RWPSS GGKG
Sbjct: 61 EIVSQRLRPFGYEYVVIDYLWYRRKVEGAYTDSLGFDVIDKWGRMAPDPGRWPSSNGGKG 120
Query: 120 FTEIAKKVHDIGLKFGIHVMKGISTQAVNANTLIYDYDKGGPYMEAGRQWRAQDIAIKEK 179
FTE+AKKVH +GLKFG HVM+GISTQAVNANT I D KGG Y E GRQW A+DIA+ E+
Sbjct: 121 FTEVAKKVHSMGLKFGFHVMRGISTQAVNANTPILDSIKGGVYEENGRQWTAKDIALTER 180
Query: 180 PCAWMPHGFMAVNTKLGAGKAFLRSLHKQYADWGVDFVKHDCAFGDDLDEGEIAVVSEVF 239
CAWMPHGFM+VNT LGAG+AFLRSL+KQYA+WGVDFVKHDC FGDD D EI VVSEV
Sbjct: 181 ACAWMPHGFMSVNTNLGAGRAFLRSLYKQYAEWGVDFVKHDCVFGDDFDLNEITVVSEVL 240
Query: 240 KGQQNRPIIYSLSPGTSATPAMAQKINGLANMYRVTGDDWDSWPDVAAHFSVARDFAAAN 299
K + +RPI+YSLSPGT TPAMA+++NGL NMYR+TGDDWD+W DVAAHF+++RD + AN
Sbjct: 241 K-ELDRPIMYSLSPGTRVTPAMAKEVNGLVNMYRITGDDWDTWGDVAAHFNISRDLSTAN 299
Query: 300 MTGALGLKGKSWPDLDMLPLGWLTDANSTQGPYRACKLTQDEQKTQITLWAMAKSPLMFG 359
M GA GL GKSWPD+DMLPLG LTD S +GP+R C+LT DEQ+TQ+TLW+MAKSPLMFG
Sbjct: 300 MIGAKGLLGKSWPDMDMLPLGTLTDPGSNEGPHRKCRLTIDEQRTQMTLWSMAKSPLMFG 359
Query: 360 GDVRKLDDTTYGLITNPTLLEIDHHSSNNKE 390
GDVR LDD TY L+TNP LLEID SSNN+E
Sbjct: 360 GDVRDLDDPTYKLLTNPILLEIDSFSSNNRE 390
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297814864|ref|XP_002875315.1| glycosyl hydrolase family protein 27 [Arabidopsis lyrata subsp. lyrata] gi|297321153|gb|EFH51574.1| glycosyl hydrolase family protein 27 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|225424633|ref|XP_002282325.1| PREDICTED: uncharacterized protein LOC100245809 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255578361|ref|XP_002530047.1| alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] gi|223530463|gb|EEF32347.1| alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|9294296|dbj|BAB02198.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|30688284|ref|NP_189269.2| Melibiase family protein [Arabidopsis thaliana] gi|332643630|gb|AEE77151.1| Melibiase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|356540239|ref|XP_003538597.1| PREDICTED: uncharacterized protein LOC100777954 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224107747|ref|XP_002314588.1| predicted protein [Populus trichocarpa] gi|222863628|gb|EEF00759.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356512659|ref|XP_003525035.1| PREDICTED: uncharacterized protein LOC100783705 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356525431|ref|XP_003531328.1| PREDICTED: uncharacterized protein LOC100802840 [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 391 | ||||||
| TAIR|locus:2079221 | 647 | AT3G26380 [Arabidopsis thalian | 0.930 | 0.562 | 0.709 | 1.2e-150 | |
| UNIPROTKB|Q5QLK3 | 649 | B1003B09.6 "cDNA clone:J013116 | 0.946 | 0.570 | 0.614 | 5.6e-132 | |
| UNIPROTKB|Q8A1R7 | 660 | BT_3592 "Alpha-galactosidase" | 0.421 | 0.25 | 0.300 | 1e-17 | |
| UNIPROTKB|B3PGJ1 | 404 | agaA "Alpha-galactosidase A" [ | 0.398 | 0.386 | 0.266 | 1.4e-16 | |
| UNIPROTKB|Q8A389 | 503 | BT_3065 "Alpha-galactosidase" | 0.437 | 0.339 | 0.295 | 3.3e-16 | |
| UNIPROTKB|Q92456 | 444 | agl1 "Alpha-galactosidase" [Tr | 0.140 | 0.123 | 0.440 | 6.6e-15 | |
| UNIPROTKB|A8HQ67 | 328 | AGA1 "Alpha-galactosidase" [Ch | 0.393 | 0.469 | 0.279 | 1.6e-13 | |
| UNIPROTKB|Q23DW6 | 381 | TTHERM_00043770 "Alpha-galacto | 0.117 | 0.120 | 0.347 | 3.1e-13 | |
| UNIPROTKB|F1NJF8 | 405 | NAGA "Alpha-N-acetylgalactosam | 0.401 | 0.387 | 0.245 | 4.1e-13 | |
| UNIPROTKB|Q23YJ0 | 382 | TTHERM_01181990 "Melibiase fam | 0.117 | 0.120 | 0.304 | 6.2e-13 |
| TAIR|locus:2079221 AT3G26380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1470 (522.5 bits), Expect = 1.2e-150, P = 1.2e-150
Identities = 259/365 (70%), Positives = 311/365 (85%)
Query: 26 ADKETEHAALPPRGWNSYDAFCWIISEQEFLESADIVAKRLLPHGYEYVVVDYLWYRKKV 85
A +HA+ PPRGWNSYD+FCW ISE EFL+SA+IV+KRLLPHGY+YVVVDYLWYRKKV
Sbjct: 32 ARSRQQHASFPPRGWNSYDSFCWTISEAEFLQSAEIVSKRLLPHGYQYVVVDYLWYRKKV 91
Query: 86 KGAHIDSEGIDLIDEWGRMVPDPERWPSSKGGKGFTEIAKKVHDIGLKFGIHVMKGISTQ 145
+GA++DS G D+IDEWGR+ PDP RWPSS+GGKGFTE+A+KVH +GLKFGIHVM GISTQ
Sbjct: 92 EGAYVDSLGFDVIDEWGRLHPDPGRWPSSRGGKGFTEVAEKVHRMGLKFGIHVMGGISTQ 151
Query: 146 AVNANTLIYDYDKGGPYMEAGRQWRAQDIAIKEKPCAWMPHGFMAVNTKLGAGKAFLRSL 205
A NAN+L+ D KGG Y E+GRQWRA+DI IKE+ C WM HGFM+VNTKLGAGKAFLRSL
Sbjct: 152 AYNANSLVMDSVKGGAYEESGRQWRAKDIGIKERACVWMSHGFMSVNTKLGAGKAFLRSL 211
Query: 206 HKQYADWGVDFVKHDCAFGDDLDEGEIAVVSEVFKGQQNRPIIYSLSPGTSATPAMAQKI 265
++QYA+WGVDF+KHDC FG D + EI VSEV K + +RP++YS+SPGTS TP MA+++
Sbjct: 212 YRQYAEWGVDFIKHDCVFGTDFNIEEITYVSEVLK-ELDRPVLYSISPGTSVTPTMAKEV 270
Query: 266 NGLANMYRVTGDDWDSWPDVAAHFSVARDFAAANMTGALGLKGKSWPDLDMLPLGWLTDA 325
+ L NMYR+TGDDWD+W DV AHF ++RD +A++M GA GL+GKSWPDLDMLPLGWLTD
Sbjct: 271 SQLVNMYRITGDDWDTWKDVTAHFDISRDLSASSMIGARGLQGKSWPDLDMLPLGWLTDQ 330
Query: 326 NSTQGPYRACKLTQDEQKTQITLWAMAKSPLMFGGDVRKLDDTTYGLITNPTLLEIDHHS 385
S GP+RAC L +EQK+Q+TLW++AKSPLMFGGDVR LD TTY LITNPTLLEI+ +S
Sbjct: 331 GSNVGPHRACNLNLEEQKSQMTLWSIAKSPLMFGGDVRNLDATTYNLITNPTLLEINSYS 390
Query: 386 SNNKE 390
SNNKE
Sbjct: 391 SNNKE 395
|
|
| UNIPROTKB|Q5QLK3 B1003B09.6 "cDNA clone:J013116P20, full insert sequence" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8A1R7 BT_3592 "Alpha-galactosidase" [Bacteroides thetaiotaomicron VPI-5482 (taxid:226186)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B3PGJ1 agaA "Alpha-galactosidase A" [Cellvibrio japonicus Ueda107 (taxid:498211)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8A389 BT_3065 "Alpha-galactosidase" [Bacteroides thetaiotaomicron VPI-5482 (taxid:226186)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q92456 agl1 "Alpha-galactosidase" [Trichoderma reesei (taxid:51453)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|A8HQ67 AGA1 "Alpha-galactosidase" [Chlamydomonas reinhardtii (taxid:3055)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q23DW6 TTHERM_00043770 "Alpha-galactosidase, putative" [Tetrahymena thermophila SB210 (taxid:312017)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NJF8 NAGA "Alpha-N-acetylgalactosaminidase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q23YJ0 TTHERM_01181990 "Melibiase family protein" [Tetrahymena thermophila SB210 (taxid:312017)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | fgenesh2_kg.5__393__AT3G26380.1 | annotation not avaliable (651 aa) | |||||||||
(Arabidopsis lyrata) | |||||||||||
 | fgenesh2_kg.6__1203__AT5G12950.1 | • | 0.424 | ||||||||
 | fgenesh1_pg.C_scaffold_6001046 | • | 0.421 | ||||||||
 | scaffold_601302.1 | • | 0.417 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 391 | |||
| PLN02899 | 633 | PLN02899, PLN02899, alpha-galactosidase | 0.0 | |
| PLN03231 | 357 | PLN03231, PLN03231, putative alpha-galactosidase; | 1e-163 | |
| PLN02808 | 386 | PLN02808, PLN02808, alpha-galactosidase | 5e-22 | |
| PLN02229 | 427 | PLN02229, PLN02229, alpha-galactosidase | 4e-19 | |
| PLN02692 | 412 | PLN02692, PLN02692, alpha-galactosidase | 9e-18 | |
| pfam02065 | 395 | pfam02065, Melibiase, Melibiase | 8e-07 | |
| COG3345 | 687 | COG3345, GalA, Alpha-galactosidase [Carbohydrate t | 1e-05 |
| >gnl|CDD|178487 PLN02899, PLN02899, alpha-galactosidase | Back alignment and domain information |
|---|
Score = 725 bits (1872), Expect = 0.0
Identities = 274/384 (71%), Positives = 321/384 (83%), Gaps = 1/384 (0%)
Query: 7 SILCFFSSLLLHRIPSANAADKETEHAALPPRGWNSYDAFCWIISEQEFLESADIVAKRL 66
FF L + A + + A+ PPRGWNSYD+F WI+SE+EFL++A+IV++RL
Sbjct: 2 RAQIFFILFCLLSLSLWIGASSQQQLASFPPRGWNSYDSFSWIVSEEEFLQNAEIVSQRL 61
Query: 67 LPHGYEYVVVDYLWYRKKVKGAHIDSEGIDLIDEWGRMVPDPERWPSSKGGKGFTEIAKK 126
LP GYEYVVVDYLWYRKKV+GA++DS G D+IDEWGR +PDP RWPSS+GGKGFTE+A+K
Sbjct: 62 LPFGYEYVVVDYLWYRKKVEGAYVDSLGFDVIDEWGRPIPDPGRWPSSRGGKGFTEVAEK 121
Query: 127 VHDIGLKFGIHVMKGISTQAVNANTLIYDYDKGGPYMEAGRQWRAQDIAIKEKPCAWMPH 186
VH +GLKFGIHVM+GISTQAVNANT I D KGG Y E+GRQWRA+DIA+KE+ CAWM H
Sbjct: 122 VHAMGLKFGIHVMRGISTQAVNANTPILDAVKGGAYEESGRQWRAKDIALKERACAWMSH 181
Query: 187 GFMAVNTKLGAGKAFLRSLHKQYADWGVDFVKHDCAFGDDLDEGEIAVVSEVFKGQQNRP 246
GFM+VNTKLGAGKAFLRSL+ QYA+WGVDFVKHDC FGDD D EI VSEV K + +RP
Sbjct: 182 GFMSVNTKLGAGKAFLRSLYDQYAEWGVDFVKHDCVFGDDFDLEEITYVSEVLK-ELDRP 240
Query: 247 IIYSLSPGTSATPAMAQKINGLANMYRVTGDDWDSWPDVAAHFSVARDFAAANMTGALGL 306
I+YSLSPGTSATP MA++++GL NMYR+TGDDWD+W DVAAHF V+RDFAAA + GA GL
Sbjct: 241 IVYSLSPGTSATPTMAKEVSGLVNMYRITGDDWDTWGDVAAHFDVSRDFAAAGLIGAKGL 300
Query: 307 KGKSWPDLDMLPLGWLTDANSTQGPYRACKLTQDEQKTQITLWAMAKSPLMFGGDVRKLD 366
+G+SWPDLDMLPLGWLTD S GP+RAC LT DEQKTQ+TLWAMAKSPLM+GGD+RKLD
Sbjct: 301 RGRSWPDLDMLPLGWLTDPGSNVGPHRACNLTLDEQKTQMTLWAMAKSPLMYGGDLRKLD 360
Query: 367 DTTYGLITNPTLLEIDHHSSNNKE 390
TY LITNPTLLEI+ HSSNN E
Sbjct: 361 QATYSLITNPTLLEINSHSSNNME 384
|
Length = 633 |
| >gnl|CDD|178770 PLN03231, PLN03231, putative alpha-galactosidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|166449 PLN02808, PLN02808, alpha-galactosidase | Back alignment and domain information |
|---|
| >gnl|CDD|177874 PLN02229, PLN02229, alpha-galactosidase | Back alignment and domain information |
|---|
| >gnl|CDD|178295 PLN02692, PLN02692, alpha-galactosidase | Back alignment and domain information |
|---|
| >gnl|CDD|216861 pfam02065, Melibiase, Melibiase | Back alignment and domain information |
|---|
| >gnl|CDD|225882 COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 391 | |||
| PLN02899 | 633 | alpha-galactosidase | 100.0 | |
| PLN03231 | 357 | putative alpha-galactosidase; Provisional | 100.0 | |
| PLN02229 | 427 | alpha-galactosidase | 100.0 | |
| PLN02692 | 412 | alpha-galactosidase | 100.0 | |
| PLN02808 | 386 | alpha-galactosidase | 100.0 | |
| KOG2366 | 414 | consensus Alpha-D-galactosidase (melibiase) [Carbo | 100.0 | |
| PF02065 | 394 | Melibiase: Melibiase; InterPro: IPR000111 O-Glycos | 100.0 | |
| COG3345 | 687 | GalA Alpha-galactosidase [Carbohydrate transport a | 99.91 | |
| PLN02355 | 758 | probable galactinol--sucrose galactosyltransferase | 99.85 | |
| cd06592 | 303 | GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact | 99.84 | |
| PLN02219 | 775 | probable galactinol--sucrose galactosyltransferase | 99.83 | |
| PLN02684 | 750 | Probable galactinol--sucrose galactosyltransferase | 99.82 | |
| PF05691 | 747 | Raffinose_syn: Raffinose synthase or seed imbibiti | 99.8 | |
| PLN02711 | 777 | Probable galactinol--sucrose galactosyltransferase | 99.75 | |
| cd06593 | 308 | GH31_xylosidase_YicI YicI alpha-xylosidase is a gl | 99.73 | |
| PLN02982 | 865 | galactinol-raffinose galactosyltransferase/ghydrol | 99.58 | |
| cd06604 | 339 | GH31_glucosidase_II_MalA Alpha-glucosidase II (alp | 99.48 | |
| PRK10658 | 665 | putative alpha-glucosidase; Provisional | 99.47 | |
| cd06602 | 339 | GH31_MGAM_SI_GAA This family includes the followin | 99.46 | |
| PF01055 | 441 | Glyco_hydro_31: Glycosyl hydrolases family 31 ; In | 99.43 | |
| cd06600 | 317 | GH31_MGAM-like This family includes the following | 99.42 | |
| cd06591 | 319 | GH31_xylosidase_XylS XylS is a glycosyl hydrolase | 99.41 | |
| cd06598 | 317 | GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide | 99.4 | |
| cd06599 | 317 | GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 | 99.39 | |
| cd06597 | 340 | GH31_transferase_CtsY CtsY (cyclic tetrasaccharide | 99.37 | |
| cd06594 | 317 | GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl | 99.37 | |
| cd06595 | 292 | GH31_xylosidase_XylS-like This family represents a | 99.36 | |
| cd06603 | 339 | GH31_GANC_GANAB_alpha This family includes the clo | 99.3 | |
| cd06601 | 332 | GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) | 99.29 | |
| COG1501 | 772 | Alpha-glucosidases, family 31 of glycosyl hydrolas | 99.24 | |
| cd06589 | 265 | GH31 The enzymes of glycosyl hydrolase family 31 ( | 99.23 | |
| PLN02763 | 978 | hydrolase, hydrolyzing O-glycosyl compounds | 99.18 | |
| PRK10426 | 635 | alpha-glucosidase; Provisional | 99.12 | |
| KOG1065 | 805 | consensus Maltase glucoamylase and related hydrola | 98.43 | |
| PF10566 | 273 | Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: | 98.35 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 96.83 | |
| PLN00196 | 428 | alpha-amylase; Provisional | 96.46 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 95.79 | |
| KOG1066 | 915 | consensus Glucosidase II catalytic (alpha) subunit | 95.64 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 95.46 | |
| cd06596 | 261 | GH31_CPE1046 CPE1046 is an uncharacterized Clostri | 94.78 | |
| KOG2366 | 414 | consensus Alpha-D-galactosidase (melibiase) [Carbo | 94.72 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 94.47 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 93.84 | |
| PLN02361 | 401 | alpha-amylase | 93.79 | |
| COG0296 | 628 | GlgB 1,4-alpha-glucan branching enzyme [Carbohydra | 93.74 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 93.58 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 92.87 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 92.51 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 92.46 | |
| PLN02784 | 894 | alpha-amylase | 91.96 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 91.81 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 91.4 | |
| PLN02960 | 897 | alpha-amylase | 91.23 | |
| smart00812 | 384 | Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro | 90.74 | |
| TIGR02403 | 543 | trehalose_treC alpha,alpha-phosphotrehalase. Treha | 90.59 | |
| PRK10785 | 598 | maltodextrin glucosidase; Provisional | 90.45 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 90.28 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 89.82 | |
| PF01120 | 346 | Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 | 89.53 | |
| PRK10933 | 551 | trehalose-6-phosphate hydrolase; Provisional | 88.81 | |
| TIGR02456 | 539 | treS_nterm trehalose synthase. Trehalose synthase | 87.09 | |
| PRK03705 | 658 | glycogen debranching enzyme; Provisional | 86.48 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 86.45 | |
| TIGR02102 | 1111 | pullulan_Gpos pullulanase, extracellular, Gram-pos | 83.04 | |
| TIGR01370 | 315 | cysRS possible cysteinyl-tRNA synthetase, Methanoc | 81.78 | |
| COG1523 | 697 | PulA Type II secretory pathway, pullulanase PulA a | 81.38 |
| >PLN02899 alpha-galactosidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-100 Score=777.29 Aligned_cols=363 Identities=74% Similarity=1.294 Sum_probs=338.3
Q ss_pred cccCCCCCCceEeeccccccccCCHHHHHHHHHHHHHhhccCCceEEEecccccccccCCcccCCCCccccCCCCCceeC
Q 041825 28 KETEHAALPPRGWNSYDAFCWIISEQEFLESADIVAKRLLPHGYEYVVVDYLWYRKKVKGAHIDSEGIDLIDEWGRMVPD 107 (391)
Q Consensus 28 ~~~~~~~~pPmGWnSW~~~~~~i~e~~v~~~ad~~~~~l~~~Gy~~v~IDdgW~~~~~~g~~~~~~~~~~~d~~G~~~~d 107 (391)
+++++++|||||||||+.|.++|||++|+++||+|++||+++||+||+|||||+...+.|.|+++.|...+|++|+++||
T Consensus 23 ~~~glA~TPPMGWNSWn~f~~~I~E~~i~~~Ad~vs~GLk~~GY~YVnIDDcW~~~~~~g~~~~s~g~~~~D~~GrLvPD 102 (633)
T PLN02899 23 SQQQLASFPPRGWNSYDSFSWIVSEEEFLQNAEIVSQRLLPFGYEYVVVDYLWYRKKVEGAYVDSLGFDVIDEWGRPIPD 102 (633)
T ss_pred ccCcccCCCCCCCcchhhhccCCCHHHHHHHHHHHHcchHhhCCeEEEEccccccccccccccccccccccCCCCCCccC
Confidence 44799999999999999999999999999999999999999999999999999986555666666777789999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCeEEEEeecCcchhhccCCccccccCCCCCCcccCccchhhhccccCCCCccCCCC
Q 041825 108 PERWPSSKGGKGFTEIAKKVHDIGLKFGIHVMKGISTQAVNANTLIYDYDKGGPYMEAGRQWRAQDIAIKEKPCAWMPHG 187 (391)
Q Consensus 108 ~~kFP~~~~~~G~k~lad~ih~~Glk~Giy~~pg~~~~a~~~~s~i~~~~~~~~~~~~g~~~~~~di~~~~~~c~~~~~~ 187 (391)
|+|||++.+++|||+||||||+||||||||+++|+++||+..++||.++.+|+.|.+.|+.|+++||..+..+|.|++.+
T Consensus 103 p~RFPSs~~g~GmK~LADYVHskGLKFGIY~~~Gi~tcA~~~~~PI~gs~~g~~y~~s~~~~~a~DIa~~~~tC~w~~~g 182 (633)
T PLN02899 103 PGRWPSSRGGKGFTEVAEKVHAMGLKFGIHVMRGISTQAVNANTPILDAVKGGAYEESGRQWRAKDIALKERACAWMSHG 182 (633)
T ss_pred cccCCCCccCCCcHHHHHHHHhCCcceEEEecCCCcccccccCCccccccccccccccccccchhhccccccccccCCCC
Confidence 99999988899999999999999999999999999999999999999988899999888899999999999999999988
Q ss_pred ceeecCCcHHHHHHHHHHHHHHHhhCCcEEeecCCCCCCCChHHHHHHHHHHHhccCCcEEEEeCCCCCCChhHHHhhhc
Q 041825 188 FMAVNTKLGAGKAFLRSLHKQYADWGVDFVKHDCAFGDDLDEGEIAVVSEVFKGQQNRPIIYSLSPGTSATPAMAQKING 267 (391)
Q Consensus 188 ~~~lD~t~p~~~~~~~~~~~~~a~wGvdylK~D~~~~~~~~~~~~~~~~~Al~~~~gr~i~ls~~~~~~~~p~~~~~~~~ 267 (391)
++.+|.++|++|+|+++++++||+|||||||+|+|+++.+++++|++|++||++ +||||+||+|+|....|.|+.++.+
T Consensus 183 ~~~vDa~~~~g~a~~~Sla~tfAsWGVDyLKyD~c~~~~~~~~ey~~ms~AL~a-TGRPIvySLspG~~~~p~wa~~v~~ 261 (633)
T PLN02899 183 FMSVNTKLGAGKAFLRSLYDQYAEWGVDFVKHDCVFGDDFDLEEITYVSEVLKE-LDRPIVYSLSPGTSATPTMAKEVSG 261 (633)
T ss_pred cccccccccchhhhhHHHHHHHHHhCCCEEEEcCCCCCCCChHHHHHHHHHHHH-hCCCeEEEecCCcccchhhhhhhhc
Confidence 999999999999999999999999999999999998877778899999999999 9999999999977767788888888
Q ss_pred cccEEEecCCCCCChhhHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCCcccccccCCCCCCCCCCCCCCCHHHHHHHHH
Q 041825 268 LANMYRVTGDDWDSWPDVAAHFSVARDFAAANMTGALGLKGKSWPDLDMLPLGWLTDANSTQGPYRACKLTQDEQKTQIT 347 (391)
Q Consensus 268 ~an~~Ris~D~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~wnDpDml~~G~~~~~~~~~g~~~~~~lt~~E~rt~~t 347 (391)
++|+|||++|+++.|.++..+++..+.|+....++.++++|++|||||||+||.+++++.|.|+++.++||.+|+||||+
T Consensus 262 ~aNmWRitgDI~D~W~sV~~~~d~~~~~~~~~~~g~~G~~gg~WNDpDML~VG~lg~~~~n~G~~r~~~LT~dE~rThfS 341 (633)
T PLN02899 262 LVNMYRITGDDWDTWGDVAAHFDVSRDFAAAGLIGAKGLRGRSWPDLDMLPLGWLTDPGSNVGPHRACNLTLDEQKTQMT 341 (633)
T ss_pred cCccceecCCcccchHHHHHHHHHHHHHhhccccccCCCCCCCCCCcceecccCCCccccccCccccCCCCHHHHHHHHH
Confidence 99999999999999999999999888887655555566667899999999999998887788888899999999999999
Q ss_pred HHHHhcCCcccccCCCCCCHhHHhhccChhhHhhhcCCCCCCCC
Q 041825 348 LWAMAKSPLMFGGDVRKLDDTTYGLITNPTLLEIDHHSSNNKEA 391 (391)
Q Consensus 348 lwa~~~sPL~ig~Dl~~l~~~~l~lL~N~eviavnQd~~~~~~~ 391 (391)
||||++||||+|.||++|++++++||+|+||||||||+++++++
T Consensus 342 LWAm~aSPLiiG~DLr~md~~tl~ILTNkeVIAINQds~~n~~~ 385 (633)
T PLN02899 342 LWAMAKSPLMYGGDLRKLDQATYSLITNPTLLEINSHSSNNMEF 385 (633)
T ss_pred HHHHHhCchhhcCCcccCCHHHHHHhcCHHHeEEccCccCCeee
Confidence 99999999999999999999999999999999999999999874
|
|
| >PLN03231 putative alpha-galactosidase; Provisional | Back alignment and domain information |
|---|
| >PLN02229 alpha-galactosidase | Back alignment and domain information |
|---|
| >PLN02692 alpha-galactosidase | Back alignment and domain information |
|---|
| >PLN02808 alpha-galactosidase | Back alignment and domain information |
|---|
| >KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02355 probable galactinol--sucrose galactosyltransferase 1 | Back alignment and domain information |
|---|
| >cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase | Back alignment and domain information |
|---|
| >PLN02219 probable galactinol--sucrose galactosyltransferase 2 | Back alignment and domain information |
|---|
| >PLN02684 Probable galactinol--sucrose galactosyltransferase | Back alignment and domain information |
|---|
| >PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins | Back alignment and domain information |
|---|
| >PLN02711 Probable galactinol--sucrose galactosyltransferase | Back alignment and domain information |
|---|
| >cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose | Back alignment and domain information |
|---|
| >PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds | Back alignment and domain information |
|---|
| >cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities | Back alignment and domain information |
|---|
| >PRK10658 putative alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
| >cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase | Back alignment and domain information |
|---|
| >PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II | Back alignment and domain information |
|---|
| >cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate | Back alignment and domain information |
|---|
| >cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY | Back alignment and domain information |
|---|
| >cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 | Back alignment and domain information |
|---|
| >cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ | Back alignment and domain information |
|---|
| >cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride | Back alignment and domain information |
|---|
| >cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus | Back alignment and domain information |
|---|
| >cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) | Back alignment and domain information |
|---|
| >cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end | Back alignment and domain information |
|---|
| >COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase | Back alignment and domain information |
|---|
| >PLN02763 hydrolase, hydrolyzing O-glycosyl compounds | Back alignment and domain information |
|---|
| >PRK10426 alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
| >KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
| >PLN00196 alpha-amylase; Provisional | Back alignment and domain information |
|---|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
| >KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
| >cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain | Back alignment and domain information |
|---|
| >KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PLN02361 alpha-amylase | Back alignment and domain information |
|---|
| >COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PLN02784 alpha-amylase | Back alignment and domain information |
|---|
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
| >smart00812 Alpha_L_fucos Alpha-L-fucosidase | Back alignment and domain information |
|---|
| >TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase | Back alignment and domain information |
|---|
| >PRK10785 maltodextrin glucosidase; Provisional | Back alignment and domain information |
|---|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
| >PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK10933 trehalose-6-phosphate hydrolase; Provisional | Back alignment and domain information |
|---|
| >TIGR02456 treS_nterm trehalose synthase | Back alignment and domain information |
|---|
| >PRK03705 glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
| >TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive | Back alignment and domain information |
|---|
| >TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type | Back alignment and domain information |
|---|
| >COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 391 | ||||
| 3cc1_A | 433 | Crystal Structure Of A Putative Alpha-N-Acetylgalac | 1e-51 | ||
| 3a5v_A | 397 | Crystal Structure Of Alpha-Galactosidase I From Mor | 1e-17 | ||
| 1uas_A | 362 | Crystal Structure Of Rice Alpha-Galactosidase Lengt | 7e-16 | ||
| 1szn_A | 417 | The Structure Of Alpha-Galactosidase Length = 417 | 1e-15 | ||
| 1ktb_A | 405 | The Structure Of Alpha-N-Acetylgalactosaminidase Le | 1e-13 | ||
| 3lx9_A | 404 | Interconversion Of Human Lysosomal Enzyme Specifici | 6e-13 | ||
| 1r46_A | 398 | Structure Of Human Alpha-galactosidase Length = 398 | 2e-12 | ||
| 3lrk_A | 479 | Structure Of Alfa-Galactosidase (Mel1) From Sacchar | 3e-12 | ||
| 3lrm_A | 479 | Structure Of Alfa-Galactosidase From Saccharomyces | 9e-12 | ||
| 3hg3_A | 404 | Human Alpha-Galactosidase Catalytic Mechanism 2. Su | 1e-11 | ||
| 3h53_A | 400 | Crystal Structure Of Human Alpha-N-Acetylgalactosam | 1e-10 | ||
| 3a21_A | 614 | Crystal Structure Of Streptomyces Avermitilis Beta- | 5e-07 |
| >pdb|3CC1|A Chain A, Crystal Structure Of A Putative Alpha-N-Acetylgalactosaminidase (Bh1870) From Bacillus Halodurans C-125 At 2.00 A Resolution Length = 433 | Back alignment and structure |
|
| >pdb|3A5V|A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea Length = 397 | Back alignment and structure |
| >pdb|1UAS|A Chain A, Crystal Structure Of Rice Alpha-Galactosidase Length = 362 | Back alignment and structure |
| >pdb|1SZN|A Chain A, The Structure Of Alpha-Galactosidase Length = 417 | Back alignment and structure |
| >pdb|1KTB|A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase Length = 405 | Back alignment and structure |
| >pdb|3LX9|A Chain A, Interconversion Of Human Lysosomal Enzyme Specificities Length = 404 | Back alignment and structure |
| >pdb|1R46|A Chain A, Structure Of Human Alpha-galactosidase Length = 398 | Back alignment and structure |
| >pdb|3LRK|A Chain A, Structure Of Alfa-Galactosidase (Mel1) From Saccharomyces Cerevisiae Length = 479 | Back alignment and structure |
| >pdb|3LRM|A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose Length = 479 | Back alignment and structure |
| >pdb|3HG3|A Chain A, Human Alpha-Galactosidase Catalytic Mechanism 2. Substrate Bound Length = 404 | Back alignment and structure |
| >pdb|3H53|A Chain A, Crystal Structure Of Human Alpha-N-Acetylgalactosaminidase Length = 400 | Back alignment and structure |
| >pdb|3A21|A Chain A, Crystal Structure Of Streptomyces Avermitilis Beta-L- Arabinopyranosidase Length = 614 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433 | Back alignment and structure |
|---|
Score = 260 bits (665), Expect = 2e-83
Identities = 129/361 (35%), Positives = 187/361 (51%), Gaps = 23/361 (6%)
Query: 33 AALPPRGWNSYDAFCWIISEQEFLESADIVAKRLLPHGYEYVVVDYLWYRKKVKGAHIDS 92
A PP GWNS+D + ++E+E L +A+ +A L +G+EY+VVD WY + +
Sbjct: 9 ALTPPMGWNSWDCYGASVTEEEVLGNAEYMANHLKKYGWEYIVVDIQWYEPTANSSAYNP 68
Query: 93 EGIDLIDEWGRMVPDPERWPSSKGGKGFTEIAKKVHDIGLKFGIHVMKGISTQAVNANTL 152
+DE+GR++P R+PS+K G GF ++ +HD+GLKFGIH+M+GI QAV N+
Sbjct: 69 FAPLCMDEYGRLLPATNRFPSAKNGAGFKPLSDAIHDLGLKFGIHIMRGIPRQAVYENSP 128
Query: 153 IYDYDKGGPYMEAGRQWRAQDIAIKEKPCAWMPHGFMAVNTKLGAGKAFLRSLHKQYADW 212
+ G A++IA C W + TK GA +++ SL + YA W
Sbjct: 129 VL-----------GSTKTAREIAHTNSICPWNTDMYGVDPTKEGA-QSYYNSLFELYAQW 176
Query: 213 GVDFVKHDCAFGDDLDEGEIAVVSEVFK--GQQNRPIIYSLSPGTSATPAMAQKINGLAN 270
GVDFVK D L + + + + + RP++ SLSPG A A AN
Sbjct: 177 GVDFVKVDDIAASRLYDTHLEEIKMIQRAIQACGRPMVLSLSPG-PAPIKYAHHFKTNAN 235
Query: 271 MYRVTGDDWDSWPDVAAHFSVARDFAAANMTGALGLKGKSWPDLDMLPLGWLT-DANSTQ 329
M+R+T D WD W + F + TG WPD MLPLG + +
Sbjct: 236 MWRITDDFWDDWSLLYQMFERCEVWEKHIGTG-------HWPDCGMLPLGHIGIRSVDGP 288
Query: 330 GPYRACKLTQDEQKTQITLWAMAKSPLMFGGDVRKLDDTTYGLITNPTLLEIDHHSSNNK 389
G R + T+DEQ T + LWA+ SPLMFGG++R D+ T L+TN +L I+ S N+
Sbjct: 289 GGDRWTRFTKDEQLTMMNLWAICHSPLMFGGELRDNDEWTLSLLTNEGILSINQKSVLNR 348
Query: 390 E 390
Sbjct: 349 F 349
|
| >3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Length = 614 | Back alignment and structure |
|---|
| >1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417 | Back alignment and structure |
|---|
| >1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Length = 362 | Back alignment and structure |
|---|
| >3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Length = 479 | Back alignment and structure |
|---|
| >3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Length = 397 | Back alignment and structure |
|---|
| >3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Length = 404 | Back alignment and structure |
|---|
| >1ktb_A Alpha-N-acetylgalactosaminidase; glycoprotein, (beta/alpha)8 barrel, hydrolase; HET: NAG; 1.90A {Gallus gallus} SCOP: b.71.1.1 c.1.8.1 PDB: 1ktc_A* 3h55_A* 3h54_A* 3h53_A* 3igu_A* Length = 405 | Back alignment and structure |
|---|
| >1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564 | Back alignment and structure |
|---|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Length = 720 | Back alignment and structure |
|---|
| >2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Length = 732 | Back alignment and structure |
|---|
| >3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Length = 745 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 391 | |||
| 3cc1_A | 433 | BH1870 protein, putative alpha-N-acetylgalactosami | 100.0 | |
| 3lrk_A | 479 | Alpha-galactosidase 1; tetramer, GH27, glycoprotei | 100.0 | |
| 3hg3_A | 404 | Alpha-galactosidase A; glycoprotein, carbohydrate- | 100.0 | |
| 3a5v_A | 397 | Alpha-galactosidase; beta/alpha barrel, N-glycosyl | 100.0 | |
| 4do4_A | 400 | Alpha-N-acetylgalactosaminidase; pharmacological c | 100.0 | |
| 1szn_A | 417 | Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma | 100.0 | |
| 1uas_A | 362 | Alpha-galactosidase; TIM-barrel, beta-alpha-barrel | 100.0 | |
| 3a21_A | 614 | Putative secreted alpha-galactosidase; beta-alpha- | 100.0 | |
| 1zy9_A | 564 | Alpha-galactosidase; TM1192, struc genomics, joint | 100.0 | |
| 4fnq_A | 729 | Alpha-galactosidase AGAB; glycoside hydrolase, hyd | 100.0 | |
| 2xn2_A | 732 | Alpha-galactosidase; hydrolase, glycosidase; HET: | 100.0 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 100.0 | |
| 3mi6_A | 745 | Alpha-galactosidase; NESG, structural genomics, PS | 99.96 | |
| 2f2h_A | 773 | Putative family 31 glucosidase YICI; BETA8alpha8 b | 99.73 | |
| 2g3m_A | 693 | Maltase, alpha-glucosidase; hydrolase, glycoside h | 99.66 | |
| 4ba0_A | 817 | Alpha-glucosidase, putative, ADG31B; hydrolase; HE | 99.58 | |
| 3nsx_A | 666 | Alpha-glucosidase; structural genomics, PSI-2, pro | 99.43 | |
| 3lpp_A | 898 | Sucrase-isomaltase; glycoside hydrolase family 31, | 99.41 | |
| 2xvl_A | 1020 | Alpha-xylosidase, putative, XYL31A; hydrolase, gly | 99.39 | |
| 3l4y_A | 875 | Maltase-glucoamylase, intestinal; glycoside hydrol | 99.32 | |
| 3a24_A | 641 | Alpha-galactosidase; glycoside hydrolase family 97 | 99.16 | |
| 3top_A | 908 | Maltase-glucoamylase, intestinal; membrane, hydrol | 98.96 | |
| 2x2h_A | 1027 | Alpha-1,4-glucan lyase isozyme 1; anhydrofructose | 98.38 | |
| 2d73_A | 738 | Alpha-glucosidase SUSB; glycoside hydrolase family | 97.77 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 96.42 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 95.8 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 95.78 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 95.55 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 95.47 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 95.22 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 94.94 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 94.51 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 94.37 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 94.09 | |
| 3m07_A | 618 | Putative alpha amylase; IDP00968, csgid, structura | 93.77 | |
| 1ht6_A | 405 | AMY1, alpha-amylase isozyme 1; barley, beta-alpha- | 93.56 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 93.51 | |
| 1m7x_A | 617 | 1,4-alpha-glucan branching enzyme; alpha/beta barr | 93.49 | |
| 4aee_A | 696 | Alpha amylase, catalytic region; hydrolase, hypert | 92.94 | |
| 2bhu_A | 602 | Maltooligosyltrehalose trehalohydrolase; alpha-amy | 92.16 | |
| 3eyp_A | 469 | Putative alpha-L-fucosidase; structural genomics, | 91.96 | |
| 1ji1_A | 637 | Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 | 91.84 | |
| 4aie_A | 549 | Glucan 1,6-alpha-glucosidase; hydrolase, glycoside | 91.16 | |
| 1wza_A | 488 | Alpha-amylase A; hydrolase, halophilic, thermophil | 89.46 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 89.25 | |
| 2e8y_A | 718 | AMYX protein, pullulanase; multiple domain, beta-a | 88.65 | |
| 3ues_A | 478 | Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr | 88.64 | |
| 1lwj_A | 441 | 4-alpha-glucanotransferase; alpha-amylase family, | 88.5 | |
| 2vr5_A | 718 | Glycogen operon protein GLGX; hydrolase, glycosida | 87.96 | |
| 1zja_A | 557 | Trehalulose synthase; sucrose isomerase, alpha-amy | 87.58 | |
| 3aml_A | 755 | OS06G0726400 protein; starch-branching, transferas | 87.5 | |
| 2wan_A | 921 | Pullulanase; hydrolase, glycoside hydrolase, polys | 87.37 | |
| 2y8v_A | 290 | CHIC, class III chitinase, putative; afchic, hydro | 86.62 | |
| 1bf2_A | 750 | Isoamylase; hydrolase, glycosidase, debranching en | 86.58 | |
| 1m53_A | 570 | Isomaltulose synthase; klebsiella SP. LX3, sucrose | 86.54 | |
| 1d3c_A | 686 | Cyclodextrin glycosyltransferase; alpha-amylase, p | 85.58 | |
| 1qho_A | 686 | Alpha-amylase; glycoside hydrolase, starch degrada | 84.72 | |
| 3bmv_A | 683 | Cyclomaltodextrin glucanotransferase; glycosidase, | 84.44 | |
| 3faw_A | 877 | Reticulocyte binding protein; TIM barrel, beta bar | 83.91 | |
| 1cyg_A | 680 | Cyclodextrin glucanotransferase; glycosyltransfera | 83.8 | |
| 4aef_A | 645 | Neopullulanase (alpha-amylase II); hydrolase, ther | 83.3 | |
| 1mxg_A | 435 | Alpha amylase; hyperthermostable, family 13 glycos | 83.19 | |
| 2ya0_A | 714 | Putative alkaline amylopullulanase; hydrolase, gly | 81.96 | |
| 2wvv_A | 450 | Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly | 81.53 | |
| 2dh2_A | 424 | 4F2 cell-surface antigen heavy chain; TIM-barrel, | 80.18 |
| >3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-77 Score=608.49 Aligned_cols=340 Identities=37% Similarity=0.667 Sum_probs=289.4
Q ss_pred ccCCCCCCceEeeccccccccCCHHHHHHHHHHHHHhhccCCceEEEecccccccccCC-cccCCCCccccCCCCCceeC
Q 041825 29 ETEHAALPPRGWNSYDAFCWIISEQEFLESADIVAKRLLPHGYEYVVVDYLWYRKKVKG-AHIDSEGIDLIDEWGRMVPD 107 (391)
Q Consensus 29 ~~~~~~~pPmGWnSW~~~~~~i~e~~v~~~ad~~~~~l~~~Gy~~v~IDdgW~~~~~~g-~~~~~~~~~~~d~~G~~~~d 107 (391)
.++++++||||||||++|+++|||+.|+++|+.++++|+++||+||+|||||+..++++ .|+. .....+|++|+|++|
T Consensus 5 ~~~~~~~pp~gwnsW~~~~~~i~e~~i~~~ad~~~~gl~~~G~~~~~iDDgW~~~~~~~~~y~~-~~~~~~d~~G~~~~~ 83 (433)
T 3cc1_A 5 NRLSALTPPMGWNSWDCYGASVTEEEVLGNAEYMANHLKKYGWEYIVVDIQWYEPTANSSAYNP-FAPLCMDEYGRLLPA 83 (433)
T ss_dssp SCBTTBCCCEEEESHHHHTTCCCHHHHHHHHHHHHHHTGGGTCCEEEECSCTTCCCTTSTTCCT-TSCSCBCTTSCBCCC
T ss_pred cCCCCCCCCEEEEChhhhCCcCCHHHHHHHHHHHHhcchhhCCeEEEECCCcCCCCCccccccc-ccccccCCCCCEeEC
Confidence 46999999999999999999999999999999889999999999999999999864321 0110 001136789999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCeEEEEeecCcchhhccCCccccccCCCCCCcccCccchhhhccccCCCCccCCCC
Q 041825 108 PERWPSSKGGKGFTEIAKKVHDIGLKFGIHVMKGISTQAVNANTLIYDYDKGGPYMEAGRQWRAQDIAIKEKPCAWMPHG 187 (391)
Q Consensus 108 ~~kFP~~~~~~G~k~lad~ih~~Glk~Giy~~pg~~~~a~~~~s~i~~~~~~~~~~~~g~~~~~~di~~~~~~c~~~~~~ 187 (391)
++|||++.+++|||+|+++||++|||||||++||+.++++.+++|++ +.+|+.+|+..+..+|.|..+
T Consensus 84 ~~kFP~~~~~~Gl~~l~~~ih~~Glk~Giw~~p~i~~~~v~~~s~~~-----------~~~~~~~di~~~~~~~~~~~~- 151 (433)
T 3cc1_A 84 TNRFPSAKNGAGFKPLSDAIHDLGLKFGIHIMRGIPRQAVYENSPVL-----------GSTKTAREIAHTNSICPWNTD- 151 (433)
T ss_dssp TTTCGGGTTTTTTHHHHHHHHHTTCEEEEEEESSEEHHHHHHTCBCT-----------TSSCBHHHHEETTCCBTTBTT-
T ss_pred CccCCCcccCCCHHHHHHHHHHcCCeeEEEeCCCCchhccCCCCccc-----------cccceecccccCCcccCCCCC-
Confidence 99999877778999999999999999999999999989999999987 346888999888889998765
Q ss_pred ceeecCCcHHHHHHHHHHHHHHHhhCCcEEeecCCCCCC---CChHHHHHHHHHHHhccCCcEEEEeCCCCCCChhHHHh
Q 041825 188 FMAVNTKLGAGKAFLRSLHKQYADWGVDFVKHDCAFGDD---LDEGEIAVVSEVFKGQQNRPIIYSLSPGTSATPAMAQK 264 (391)
Q Consensus 188 ~~~lD~t~p~~~~~~~~~~~~~a~wGvdylK~D~~~~~~---~~~~~~~~~~~Al~~~~gr~i~ls~~~~~~~~p~~~~~ 264 (391)
.|.||++||++++|+++++++|++|||||||+|+|+... ++.++|++|++||++ +||||+|++|++. ..+.++..
T Consensus 152 ~~~lD~~~p~~~~~~~~~~~~l~~~GvDyvK~D~~~~~~~~~~~~~~~~~~~~aL~~-~gr~i~~slc~g~-~~~~~~~~ 229 (433)
T 3cc1_A 152 MYGVDPTKEGAQSYYNSLFELYAQWGVDFVKVDDIAASRLYDTHLEEIKMIQRAIQA-CGRPMVLSLSPGP-APIKYAHH 229 (433)
T ss_dssp EEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEESCSCTTSSCCCHHHHHHHHHHHHH-SSSCCEEECCCSB-SSEESCSS
T ss_pred ceeecCCCHHHHHHHHHHHHHHHHcCCCEEEeCCcccccCCcccHHHHHHHHHHHHh-cCCCEEEEecCCC-CChhhhhh
Confidence 568999999999999999999999999999999997632 346789999999999 9999999999852 23322233
Q ss_pred hhccccEEEecCCCCCChhhHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCCcccccccCCC-CCCCCCCCCCCCHHHHH
Q 041825 265 INGLANMYRVTGDDWDSWPDVAAHFSVARDFAAANMTGALGLKGKSWPDLDMLPLGWLTDAN-STQGPYRACKLTQDEQK 343 (391)
Q Consensus 265 ~~~~an~~Ris~D~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~wnDpDml~~G~~~~~~-~~~g~~~~~~lt~~E~r 343 (391)
+.+++|+|||++|+++.|.++.++++....|+.. . ++++|||||||++|..+..+ .++|..+.++||.+|+|
T Consensus 230 ~~~~~n~wR~s~D~~~~w~~~~~~~~~~~~~~~~-----~--~~g~~nD~Dml~vg~~g~~~~~~~~~~~~~~lt~~E~r 302 (433)
T 3cc1_A 230 FKTNANMWRITDDFWDDWSLLYQMFERCEVWEKH-----I--GTGHWPDCGMLPLGHIGIRSVDGPGGDRWTRFTKDEQL 302 (433)
T ss_dssp SCCTTGGGCCEECCCSCHHHHHHHHHHHHHHHHS-----C--CCSCCCBCCCBCCSEECTTCSSSSSSSEECSSCHHHHH
T ss_pred hhhhCcEEEeccCccccHHHHHHHHHHHHHHHhh-----c--CCCccCChHHhcccCccccccccccccccCCCCHHHHH
Confidence 4678999999999999999999998877666531 2 35799999999999754221 13455667899999999
Q ss_pred HHHHHHHHhcCCcccccCCCCCCHhHHhhccChhhHhhhcCCCCCCC
Q 041825 344 TQITLWAMAKSPLMFGGDVRKLDDTTYGLITNPTLLEIDHHSSNNKE 390 (391)
Q Consensus 344 t~~tlwa~~~sPL~ig~Dl~~l~~~~l~lL~N~eviavnQd~~~~~~ 390 (391)
|||+||||++|||++|+||++++++++++|+|+||||||||+..+++
T Consensus 303 t~~alwai~~spL~ig~dl~~~~~~~~~lL~N~eviavnqdg~~~~~ 349 (433)
T 3cc1_A 303 TMMNLWAICHSPLMFGGELRDNDEWTLSLLTNEGILSINQKSVLNRF 349 (433)
T ss_dssp HHHHHHHHTTCCEEECSCGGGCCHHHHHHHCCHHHHHHHHHCEEEEE
T ss_pred HHHHHHHHhcCceEecCccccCCHHHHHHhcChhheeecCCCcCcee
Confidence 99999999999999999999999999999999999999999876553
|
| >3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* | Back alignment and structure |
|---|
| >3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* | Back alignment and structure |
|---|
| >3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} | Back alignment and structure |
|---|
| >4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* | Back alignment and structure |
|---|
| >1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* | Back alignment and structure |
|---|
| >1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* | Back alignment and structure |
|---|
| >1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 | Back alignment and structure |
|---|
| >4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* | Back alignment and structure |
|---|
| >2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* | Back alignment and structure |
|---|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* | Back alignment and structure |
|---|
| >3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} | Back alignment and structure |
|---|
| >2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* | Back alignment and structure |
|---|
| >2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* | Back alignment and structure |
|---|
| >4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* | Back alignment and structure |
|---|
| >3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* | Back alignment and structure |
|---|
| >3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* | Back alignment and structure |
|---|
| >2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* | Back alignment and structure |
|---|
| >3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* | Back alignment and structure |
|---|
| >3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* | Back alignment and structure |
|---|
| >2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* | Back alignment and structure |
|---|
| >2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* | Back alignment and structure |
|---|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A | Back alignment and structure |
|---|
| >3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} | Back alignment and structure |
|---|
| >1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* | Back alignment and structure |
|---|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* | Back alignment and structure |
|---|
| >1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* | Back alignment and structure |
|---|
| >4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} | Back alignment and structure |
|---|
| >2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* | Back alignment and structure |
|---|
| >3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A | Back alignment and structure |
|---|
| >4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} | Back alignment and structure |
|---|
| >1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
| >2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* | Back alignment and structure |
|---|
| >3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* | Back alignment and structure |
|---|
| >1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* | Back alignment and structure |
|---|
| >2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A | Back alignment and structure |
|---|
| >1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* | Back alignment and structure |
|---|
| >3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A | Back alignment and structure |
|---|
| >2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} | Back alignment and structure |
|---|
| >2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} | Back alignment and structure |
|---|
| >1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... | Back alignment and structure |
|---|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* | Back alignment and structure |
|---|
| >3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A | Back alignment and structure |
|---|
| >3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* | Back alignment and structure |
|---|
| >1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} | Back alignment and structure |
|---|
| >1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* | Back alignment and structure |
|---|
| >2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* | Back alignment and structure |
|---|
| >2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* | Back alignment and structure |
|---|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 391 | ||||
| d1szna2 | 314 | c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T | 1e-47 | |
| d1r46a2 | 292 | c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) | 2e-45 | |
| d1uasa2 | 273 | c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [ | 3e-40 | |
| d1ktba2 | 293 | c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu | 1e-39 | |
| d1zy9a2 | 348 | c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata | 2e-39 |
| >d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Trichoderma reesei [TaxId: 51453]
Score = 162 bits (411), Expect = 1e-47
Identities = 85/352 (24%), Positives = 127/352 (36%), Gaps = 49/352 (13%)
Query: 35 LPPRGWNSYDAFCWIISEQEFLESAD-IVAKRLLPHGYEYVVVDYLWYRKKVKGAHIDSE 93
+P GWNS++A+ I E +FL +A+ IV+ LL GY YV +D W K
Sbjct: 11 VPSLGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDG-------- 62
Query: 94 GIDLIDEWGRMVPDPERWPSSKGGKGFTEIAKKVHDIGLKFGIHVMKGISTQAVNANTLI 153
G + P+ R+P G +AKKVH +GLK GI+ G +T A +L
Sbjct: 63 -----RVDGHIAPNATRFPD-----GIDGLAKKVHALGLKLGIYSTAGTATCAGYPASLG 112
Query: 154 YDYDKGGPYMEAGRQWRAQDIAIKEKPCAWMPHGFMAVNTKLGAGKAFLRSLHKQYADWG 213
Y+ + + G + D K G +L A G
Sbjct: 113 YEDVDAADFADWGVDYLKYDNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPG 172
Query: 214 VDFVKHDCAFGDDLDEGEIAVVSEVFKGQQNRPIIYSLSPGTSATPAMAQKINGLANMYR 273
D+ A +A +Q+ I+ S+ A N +R
Sbjct: 173 YDWSTSKSAERFGAMRNALA--------KQSHEIVLSMCIWGQADVFSW--GNSTGISWR 222
Query: 274 VTGDDWDSWPDVAAHFSVARDFAAANMTGALGLKGKSWPDLDMLPLGWLTDANSTQGPYR 333
++ D +W V ++ + D DML +G
Sbjct: 223 MSDDISPNWGSVTRILNLNSFKLNSVDFWG-------HNDADMLEVGN------------ 263
Query: 334 ACKLTQDEQKTQITLWAMAKSPLMFGGDVRKLDDTTYGLITNPTLLEIDHHS 385
LT E +T LWA KSPL+ G D+ +L L+ N LL + S
Sbjct: 264 -GNLTAAETRTHFALWAAMKSPLLIGTDLAQLSQNNINLLKNKHLLAFNQDS 314
|
| >d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
| >d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273 | Back information, alignment and structure |
|---|
| >d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293 | Back information, alignment and structure |
|---|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 391 | |||
| d1uasa2 | 273 | Melibiase {Rice (Oryza sativa) [TaxId: 4530]} | 100.0 | |
| d1r46a2 | 292 | Melibiase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1ktba2 | 293 | Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} | 100.0 | |
| d1szna2 | 314 | Melibiase {Trichoderma reesei [TaxId: 51453]} | 100.0 | |
| d1zy9a2 | 348 | Alpha-galactosidase GalA catalytic domain {Thermot | 100.0 | |
| d2f2ha4 | 338 | Putative glucosidase YicI, domain 2 {Escherichia c | 99.65 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 96.15 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 95.77 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 95.42 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 95.41 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 95.11 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 94.95 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 94.81 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 94.76 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 94.55 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 94.38 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 93.93 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 93.74 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 93.62 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 93.57 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 93.05 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 93.01 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 92.88 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 92.87 | |
| d1g5aa2 | 554 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 91.82 | |
| d1hl9a2 | 350 | Putative alpha-L-fucosidase, catalytic domain {The | 91.78 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 90.2 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 89.33 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 88.57 | |
| d2aama1 | 285 | Hypothetical protein TM1410 {Thermotoga maritima [ | 85.23 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 85.16 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 82.36 | |
| d1edta_ | 265 | Endo-beta-N-acetylglucosaminidase {Streptomyces pl | 80.26 |
| >d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=100.00 E-value=2.9e-66 Score=495.17 Aligned_cols=270 Identities=30% Similarity=0.517 Sum_probs=232.2
Q ss_pred ccCCCCCCceEeeccccccccCCHHHHHHHHHHH-HHhhccCCceEEEecccccccccCCcccCCCCccccCCCCCceeC
Q 041825 29 ETEHAALPPRGWNSYDAFCWIISEQEFLESADIV-AKRLLPHGYEYVVVDYLWYRKKVKGAHIDSEGIDLIDEWGRMVPD 107 (391)
Q Consensus 29 ~~~~~~~pPmGWnSW~~~~~~i~e~~v~~~ad~~-~~~l~~~Gy~~v~IDdgW~~~~~~g~~~~~~~~~~~d~~G~~~~d 107 (391)
+||+++|||||||||++|+++|||+.|+++++.+ +++|+++||+||+|||||+... +|..|+|++|
T Consensus 2 ~ngla~tPp~GwnsW~~~~~~i~e~~~~~~~~~~~~~gl~~~G~~~~~iDdGW~~~~-------------~d~~g~~~~~ 68 (273)
T d1uasa2 2 ENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYS-------------RDSQGNFVPN 68 (273)
T ss_dssp CSSCCSSCCEEEESHHHHTTCCCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSS-------------CCTTSCCCBC
T ss_pred CCccCCCCCCccCcHHhhCcCCCHHHHHHHHHHHHHcCchhhCCeEEEEcCCcCCCC-------------CCCCCCcccC
Confidence 4799999999999999999999999999999987 5689999999999999999753 4678999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCeEEEEeecCcchhhccCCccccccCCCCCCcccCccchhhhccccCCCCccCCCC
Q 041825 108 PERWPSSKGGKGFTEIAKKVHDIGLKFGIHVMKGISTQAVNANTLIYDYDKGGPYMEAGRQWRAQDIAIKEKPCAWMPHG 187 (391)
Q Consensus 108 ~~kFP~~~~~~G~k~lad~ih~~Glk~Giy~~pg~~~~a~~~~s~i~~~~~~~~~~~~g~~~~~~di~~~~~~c~~~~~~ 187 (391)
++|||+ |||+|+++||++|||||||++|+...|.
T Consensus 69 ~~~fP~-----Gl~~~~~~~~~~G~~~Glw~~~~~~~~~----------------------------------------- 102 (273)
T d1uasa2 69 RQTFPS-----GIKALADYVHAKGLKLGIYSDAGSQTCS----------------------------------------- 102 (273)
T ss_dssp TTTCTT-----CHHHHHHHHHHTTCEEEEEEESSSBCTT-----------------------------------------
T ss_pred ccccCC-----ChHHHHHHHHhCCCeEEEecCCcccccC-----------------------------------------
Confidence 999999 9999999999999999999998754331
Q ss_pred ceeecCCcHHHHHHHHHHHHHHHhhCCcEEeecCCCCCCCC-hHHHHHHHHHHHhccCCcEEEEeCCCCCCChhHHHhhh
Q 041825 188 FMAVNTKLGAGKAFLRSLHKQYADWGVDFVKHDCAFGDDLD-EGEIAVVSEVFKGQQNRPIIYSLSPGTSATPAMAQKIN 266 (391)
Q Consensus 188 ~~~lD~t~p~~~~~~~~~~~~~a~wGvdylK~D~~~~~~~~-~~~~~~~~~Al~~~~gr~i~ls~~~~~~~~p~~~~~~~ 266 (391)
.++|+++.|++.++++|++|||||||+|+|...... .++|..+.++|++ ++|++++++|.++...+.. ...
T Consensus 103 -----~~~~~~~~~~~~d~~~~~~wGvd~vK~D~~~~~~~~~~~~~~~~~~~l~~-~~r~~~~~~~~~g~~~~~~--~~~ 174 (273)
T d1uasa2 103 -----NKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKT-YGKNIFFSLCEWGKENPAT--WAG 174 (273)
T ss_dssp -----SSSBCCTTCHHHHHHHHHHHTCCEEEEECCCCTTCCHHHHHHHHHHHHHH-HCTTSEEEEESTTTTCGGG--TGG
T ss_pred -----CCCCcchhhHHHHHHHHHhCCCceeccccccccchHHHHHHHHHHHHHHH-hCCCcEEeecccCCCcchh--hhh
Confidence 223445667788899999999999999999765444 4578999999999 9999999999755433322 235
Q ss_pred ccccEEEecCCCCCChhhHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCCcccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 041825 267 GLANMYRVTGDDWDSWPDVAAHFSVARDFAAANMTGALGLKGKSWPDLDMLPLGWLTDANSTQGPYRACKLTQDEQKTQI 346 (391)
Q Consensus 267 ~~an~~Ris~D~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~wnDpDml~~G~~~~~~~~~g~~~~~~lt~~E~rt~~ 346 (391)
.++|+||+++|+.+.|+++..+++....+.. .. ++++|+||||+++|. .++|.+|+||||
T Consensus 175 ~~~~~~R~s~D~~~~w~~~~~~~~~~~~~~~-----~~--g~~~~~D~D~~~~~~-------------~~~t~~E~rt~~ 234 (273)
T d1uasa2 175 RMGNSWRTTGDIADNWGSMTSRADENDQWAA-----YA--GPGGWNDPDMLEVGN-------------GGMSEAEYRSHF 234 (273)
T ss_dssp GTCSEEECSSCCCSSHHHHHHHHHHHHTTGG-----GC--BTTBEEECCCCCTTS-------------SSSCHHHHHHHH
T ss_pred hhhhhhcccCCcCcchhhHHHHHHHHHHHHH-----Hh--CCCcccCccccccCC-------------CCCCHHHHHHHH
Confidence 6899999999999999999887775544322 12 357999999999994 479999999999
Q ss_pred HHHHHhcCCcccccCCCCCCHhHHhhccChhhHhhhcCC
Q 041825 347 TLWAMAKSPLMFGGDVRKLDDTTYGLITNPTLLEIDHHS 385 (391)
Q Consensus 347 tlwa~~~sPL~ig~Dl~~l~~~~l~lL~N~eviavnQd~ 385 (391)
++|||++|||++|+||++++++.+++|+|+|+||||||+
T Consensus 235 al~~i~~~pL~i~~Dl~~l~~~~l~ll~N~e~IAinqd~ 273 (273)
T d1uasa2 235 SIWALAKAPLLIGCDVRSMSQQTKNILSNSEVIAVNQDS 273 (273)
T ss_dssp HHHHHTTCCEEECSCTTSCCHHHHHHHTCHHHHHHHTCT
T ss_pred HHHHHHhchhhhcCCcccCCHHHHHHhcCHHHHhhccCC
Confidence 999999999999999999999999999999999999996
|
| >d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
| >d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
| >d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} | Back information, alignment and structure |
|---|